Query 022298
Match_columns 299
No_of_seqs 322 out of 2320
Neff 6.2
Searched_HMMs 29240
Date Mon Mar 25 03:12:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022298.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022298hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3p9n_A Possible methyltransfer 100.0 2.1E-27 7.3E-32 204.4 17.6 167 107-285 1-187 (189)
2 2fpo_A Methylase YHHF; structu 99.9 2E-25 6.7E-30 195.5 15.4 165 107-285 12-194 (202)
3 2ift_A Putative methylase HI07 99.9 2.7E-25 9.3E-30 194.5 14.1 167 107-286 11-197 (201)
4 2fhp_A Methylase, putative; al 99.9 1E-24 3.4E-29 185.3 15.2 167 107-283 2-186 (187)
5 1ws6_A Methyltransferase; stru 99.9 7.3E-21 2.5E-25 158.8 15.2 151 108-281 1-170 (171)
6 2esr_A Methyltransferase; stru 99.9 9E-21 3.1E-25 160.5 15.1 152 120-284 2-171 (177)
7 1nv8_A HEMK protein; class I a 99.6 8.2E-15 2.8E-19 135.3 14.8 120 107-243 79-204 (284)
8 2dul_A N(2),N(2)-dimethylguano 99.6 1.1E-14 3.8E-19 140.1 15.0 110 119-243 11-143 (378)
9 3k6r_A Putative transferase PH 99.6 6.6E-15 2.2E-19 136.4 11.0 80 155-243 125-204 (278)
10 2b78_A Hypothetical protein SM 99.6 2E-14 6.8E-19 138.1 14.0 84 155-242 212-296 (385)
11 3axs_A Probable N(2),N(2)-dime 99.6 1E-14 3.6E-19 141.1 11.7 106 128-243 27-136 (392)
12 2oo3_A Protein involved in cat 99.6 1.2E-15 4E-20 141.6 4.4 91 138-243 81-171 (283)
13 2igt_A SAM dependent methyltra 99.5 1.5E-13 5E-18 129.9 14.2 102 129-241 133-235 (332)
14 3lpm_A Putative methyltransfer 99.5 5.3E-14 1.8E-18 126.9 10.3 111 118-244 21-132 (259)
15 3bt7_A TRNA (uracil-5-)-methyl 99.5 3.9E-13 1.3E-17 128.2 14.5 114 119-243 182-307 (369)
16 2b3t_A Protein methyltransfera 99.5 5.7E-13 2E-17 121.1 14.8 117 110-244 69-189 (276)
17 3c0k_A UPF0064 protein YCCW; P 99.5 1.6E-13 5.4E-18 131.8 11.5 85 155-243 220-305 (396)
18 3ldg_A Putative uncharacterize 99.5 1.2E-13 4.1E-18 133.2 10.5 99 130-244 176-313 (384)
19 3v97_A Ribosomal RNA large sub 99.5 1.9E-13 6.6E-18 140.9 12.7 82 155-243 539-621 (703)
20 1wy7_A Hypothetical protein PH 99.5 4.5E-13 1.5E-17 115.6 12.8 98 130-244 28-125 (207)
21 1dus_A MJ0882; hypothetical pr 99.5 1E-12 3.4E-17 110.7 14.5 120 107-243 9-131 (194)
22 3gdh_A Trimethylguanosine synt 99.5 3.4E-13 1.2E-17 119.3 11.9 98 130-243 59-156 (241)
23 2h00_A Methyltransferase 10 do 99.4 1E-13 3.5E-18 123.9 7.8 123 113-244 23-153 (254)
24 3k0b_A Predicted N6-adenine-sp 99.4 1.7E-13 6E-18 132.3 9.7 98 130-243 183-319 (393)
25 3ldu_A Putative methylase; str 99.4 1.7E-13 5.8E-18 131.9 8.9 98 130-243 177-313 (385)
26 2frn_A Hypothetical protein PH 99.4 3.8E-13 1.3E-17 123.2 10.6 108 118-243 96-204 (278)
27 2as0_A Hypothetical protein PH 99.4 4.4E-13 1.5E-17 128.6 11.0 85 155-243 217-301 (396)
28 2oyr_A UPF0341 protein YHIQ; a 99.4 9.1E-14 3.1E-18 127.4 5.2 92 138-244 76-177 (258)
29 4dzr_A Protein-(glutamine-N5) 99.4 1.6E-13 5.5E-18 117.6 6.4 105 127-243 8-113 (215)
30 4dmg_A Putative uncharacterize 99.4 5.4E-13 1.9E-17 128.9 10.6 78 155-242 214-291 (393)
31 3tm4_A TRNA (guanine N2-)-meth 99.4 6.1E-13 2.1E-17 127.1 10.5 98 130-243 200-298 (373)
32 3tma_A Methyltransferase; thum 99.4 7.6E-13 2.6E-17 124.9 10.4 99 129-243 184-284 (354)
33 2yx1_A Hypothetical protein MJ 99.4 2.3E-12 7.9E-17 121.4 13.5 76 155-243 195-270 (336)
34 1uwv_A 23S rRNA (uracil-5-)-me 99.4 1.7E-12 5.7E-17 126.5 12.9 113 118-243 253-368 (433)
35 2r6z_A UPF0341 protein in RSP 99.4 5.3E-13 1.8E-17 121.9 7.9 84 155-243 83-173 (258)
36 1wxx_A TT1595, hypothetical pr 99.4 1.4E-12 4.7E-17 124.8 10.0 83 155-243 209-291 (382)
37 2ozv_A Hypothetical protein AT 99.4 9.6E-13 3.3E-17 119.4 8.5 89 155-244 36-128 (260)
38 3ll7_A Putative methyltransfer 99.4 8.7E-13 3E-17 128.3 8.7 81 156-244 94-176 (410)
39 1iy9_A Spermidine synthase; ro 99.4 3.1E-12 1.1E-16 117.4 11.3 127 100-242 24-159 (275)
40 3a27_A TYW2, uncharacterized p 99.4 3.3E-12 1.1E-16 116.8 11.1 79 155-243 119-198 (272)
41 4dcm_A Ribosomal RNA large sub 99.3 5.1E-12 1.8E-16 121.1 12.0 110 118-243 192-304 (375)
42 1o54_A SAM-dependent O-methylt 99.3 5.6E-12 1.9E-16 114.5 11.6 120 112-243 58-193 (277)
43 1ne2_A Hypothetical protein TA 99.3 6.4E-12 2.2E-16 108.1 11.0 94 130-244 30-123 (200)
44 3evz_A Methyltransferase; NYSG 99.3 2.5E-12 8.7E-17 112.7 8.2 80 155-243 55-135 (230)
45 1o9g_A RRNA methyltransferase; 99.3 1.1E-12 3.6E-17 117.4 4.3 86 155-243 51-180 (250)
46 2jjq_A Uncharacterized RNA met 99.3 3.5E-11 1.2E-15 117.3 15.3 108 116-243 258-365 (425)
47 3dmg_A Probable ribosomal RNA 99.3 1.6E-11 5.4E-16 118.1 12.5 99 129-243 212-310 (381)
48 1l3i_A Precorrin-6Y methyltran 99.3 3.2E-11 1.1E-15 101.2 12.6 98 129-242 14-111 (192)
49 2yxd_A Probable cobalt-precorr 99.3 3.2E-11 1.1E-15 100.7 12.4 94 129-240 16-109 (183)
50 3eey_A Putative rRNA methylase 99.3 6.5E-12 2.2E-16 107.5 8.1 80 155-241 22-103 (197)
51 3njr_A Precorrin-6Y methylase; 99.3 2.1E-11 7.2E-16 106.5 11.5 94 132-241 39-132 (204)
52 3v97_A Ribosomal RNA large sub 99.3 5.3E-12 1.8E-16 130.2 8.3 102 129-243 171-315 (703)
53 1mjf_A Spermidine synthase; sp 99.3 2.3E-11 7.7E-16 111.8 11.4 122 103-242 27-163 (281)
54 3mti_A RRNA methylase; SAM-dep 99.3 1.9E-11 6.5E-16 103.5 10.1 80 155-243 22-101 (185)
55 3grz_A L11 mtase, ribosomal pr 99.2 7.4E-11 2.5E-15 101.7 13.2 95 128-242 42-136 (205)
56 3e05_A Precorrin-6Y C5,15-meth 99.2 4E-11 1.4E-15 103.4 10.9 95 132-242 24-119 (204)
57 4hc4_A Protein arginine N-meth 99.2 3.9E-11 1.3E-15 115.5 10.7 77 154-240 82-158 (376)
58 1inl_A Spermidine synthase; be 99.2 6.7E-11 2.3E-15 109.6 11.7 130 101-242 40-174 (296)
59 3mb5_A SAM-dependent methyltra 99.2 1E-10 3.5E-15 104.1 12.4 80 155-243 93-174 (255)
60 3q87_B N6 adenine specific DNA 99.2 2.3E-11 7.9E-16 103.1 7.5 85 128-242 5-89 (170)
61 3ajd_A Putative methyltransfer 99.2 7.5E-11 2.6E-15 107.6 11.2 84 155-243 83-168 (274)
62 3kr9_A SAM-dependent methyltra 99.2 2.9E-11 9.9E-16 108.8 8.2 75 155-237 15-90 (225)
63 2nxc_A L11 mtase, ribosomal pr 99.2 7.7E-11 2.6E-15 106.4 10.8 95 127-242 101-195 (254)
64 2o07_A Spermidine synthase; st 99.2 1.4E-10 4.7E-15 108.1 12.7 130 99-242 43-179 (304)
65 2qm3_A Predicted methyltransfe 99.2 6.7E-11 2.3E-15 112.7 10.8 81 154-242 171-252 (373)
66 3m4x_A NOL1/NOP2/SUN family pr 99.2 7.7E-11 2.6E-15 116.0 11.1 80 155-242 105-186 (456)
67 3gnl_A Uncharacterized protein 99.2 3.9E-11 1.3E-15 109.2 8.1 75 155-237 21-96 (244)
68 3lec_A NADB-rossmann superfami 99.2 4.1E-11 1.4E-15 108.2 8.2 75 155-237 21-96 (230)
69 2pt6_A Spermidine synthase; tr 99.2 2E-10 6.8E-15 107.8 12.6 123 105-240 70-198 (321)
70 3tr6_A O-methyltransferase; ce 99.2 2.2E-10 7.7E-15 99.8 11.8 86 155-242 64-151 (225)
71 3m6w_A RRNA methylase; rRNA me 99.2 9.7E-11 3.3E-15 115.5 10.4 79 155-242 101-181 (464)
72 3ntv_A MW1564 protein; rossman 99.1 4.1E-10 1.4E-14 99.8 13.3 81 155-242 71-153 (232)
73 3r0q_C Probable protein argini 99.1 1.6E-10 5.3E-15 110.5 11.3 79 154-242 62-141 (376)
74 2pjd_A Ribosomal RNA small sub 99.1 8.1E-11 2.8E-15 110.7 9.1 108 117-243 165-273 (343)
75 3hm2_A Precorrin-6Y C5,15-meth 99.1 1.7E-10 5.9E-15 96.3 10.1 99 130-243 7-106 (178)
76 3u81_A Catechol O-methyltransf 99.1 3E-10 1E-14 99.5 11.7 86 155-242 58-145 (221)
77 3dr5_A Putative O-methyltransf 99.1 2.3E-10 7.9E-15 101.5 10.8 82 156-243 57-141 (221)
78 2b9e_A NOL1/NOP2/SUN domain fa 99.1 1.7E-10 5.7E-15 108.1 10.4 83 155-243 102-186 (309)
79 3duw_A OMT, O-methyltransferas 99.1 8.1E-10 2.8E-14 96.3 13.6 85 155-242 58-144 (223)
80 1m6y_A S-adenosyl-methyltransf 99.1 2.5E-10 8.4E-15 106.7 10.7 84 155-243 26-110 (301)
81 1g6q_1 HnRNP arginine N-methyl 99.1 5E-10 1.7E-14 104.9 12.6 91 135-241 25-115 (328)
82 2fyt_A Protein arginine N-meth 99.1 5E-10 1.7E-14 105.6 12.5 81 154-243 63-144 (340)
83 3bzb_A Uncharacterized protein 99.1 3.1E-10 1.1E-14 103.8 10.8 105 130-243 61-176 (281)
84 2h1r_A Dimethyladenosine trans 99.1 1.2E-10 4.2E-15 108.0 8.0 91 134-243 28-118 (299)
85 2frx_A Hypothetical protein YE 99.1 2.2E-10 7.6E-15 113.3 9.9 80 155-242 117-198 (479)
86 2f8l_A Hypothetical protein LM 99.1 1.5E-10 5.1E-15 108.8 7.8 77 155-242 130-212 (344)
87 2avd_A Catechol-O-methyltransf 99.1 8.7E-10 3E-14 96.3 12.2 84 155-242 69-156 (229)
88 2qfm_A Spermine synthase; sper 99.1 3.4E-10 1.2E-14 108.4 10.0 83 155-241 188-277 (364)
89 3c3p_A Methyltransferase; NP_9 99.1 5E-10 1.7E-14 97.1 10.2 79 155-241 56-136 (210)
90 3b3j_A Histone-arginine methyl 99.1 3.5E-10 1.2E-14 111.8 10.4 92 132-240 142-233 (480)
91 3q7e_A Protein arginine N-meth 99.1 6.7E-10 2.3E-14 105.0 11.5 77 155-240 66-142 (349)
92 1sui_A Caffeoyl-COA O-methyltr 99.1 8.7E-10 3E-14 99.3 11.7 86 155-241 79-166 (247)
93 2y1w_A Histone-arginine methyl 99.1 1.1E-09 3.8E-14 103.3 12.8 90 136-242 38-127 (348)
94 3tfw_A Putative O-methyltransf 99.1 1.1E-09 3.7E-14 98.2 11.9 83 155-242 63-147 (248)
95 1ixk_A Methyltransferase; open 99.1 4.5E-10 1.5E-14 104.8 9.7 80 155-243 118-199 (315)
96 2okc_A Type I restriction enzy 99.1 2.5E-10 8.4E-15 111.3 8.2 98 130-243 153-265 (445)
97 1yzh_A TRNA (guanine-N(7)-)-me 99.1 4.9E-10 1.7E-14 97.5 9.3 80 155-241 41-121 (214)
98 1jsx_A Glucose-inhibited divis 99.0 6.7E-10 2.3E-14 95.4 9.8 96 130-239 44-140 (207)
99 3f4k_A Putative methyltransfer 99.0 1E-09 3.5E-14 97.2 11.2 101 129-243 26-126 (257)
100 2yvl_A TRMI protein, hypotheti 99.0 2.9E-10 1E-14 100.2 7.6 79 155-242 91-169 (248)
101 3c3y_A Pfomt, O-methyltransfer 99.0 1.8E-09 6E-14 96.3 12.5 86 155-241 70-157 (237)
102 1zq9_A Probable dimethyladenos 99.0 4.6E-10 1.6E-14 103.3 8.7 91 135-243 15-105 (285)
103 3r3h_A O-methyltransferase, SA 99.0 3.8E-10 1.3E-14 101.3 8.0 86 155-242 60-147 (242)
104 3lkd_A Type I restriction-modi 99.0 9.7E-10 3.3E-14 110.3 11.2 107 129-243 198-309 (542)
105 2ih2_A Modification methylase 99.0 3E-10 1E-14 108.4 7.1 89 129-243 20-110 (421)
106 3kkz_A Uncharacterized protein 99.0 1.5E-09 5.2E-14 97.2 11.3 100 130-243 27-126 (267)
107 2gpy_A O-methyltransferase; st 99.0 2E-09 7E-14 94.6 11.8 83 155-242 54-137 (233)
108 3tqs_A Ribosomal RNA small sub 99.0 6.5E-10 2.2E-14 101.3 8.7 93 135-243 16-108 (255)
109 3dxy_A TRNA (guanine-N(7)-)-me 99.0 2.7E-09 9.2E-14 94.4 11.8 83 155-243 34-119 (218)
110 2ar0_A M.ecoki, type I restric 99.0 8.3E-10 2.8E-14 110.7 9.4 102 129-244 150-274 (541)
111 3g89_A Ribosomal RNA small sub 99.0 1.6E-09 5.5E-14 97.8 10.4 99 133-238 59-158 (249)
112 1xdz_A Methyltransferase GIDB; 99.0 3.2E-09 1.1E-13 94.2 12.2 104 129-239 45-149 (240)
113 1nkv_A Hypothetical protein YJ 99.0 2.9E-09 9.8E-14 94.2 11.7 95 128-238 16-110 (256)
114 3uwp_A Histone-lysine N-methyl 99.0 2.6E-09 8.9E-14 104.1 12.1 101 130-243 155-264 (438)
115 1g8a_A Fibrillarin-like PRE-rR 99.0 1.2E-09 4E-14 95.7 8.9 100 130-241 52-153 (227)
116 3lbf_A Protein-L-isoaspartate 99.0 3.1E-09 1.1E-13 91.6 11.4 78 155-242 77-154 (210)
117 3fut_A Dimethyladenosine trans 99.0 1.3E-09 4.5E-14 100.3 9.1 90 135-244 34-123 (271)
118 3gru_A Dimethyladenosine trans 99.0 1.3E-09 4.3E-14 101.6 9.1 90 135-243 37-126 (295)
119 3dlc_A Putative S-adenosyl-L-m 99.0 3E-09 1E-13 91.1 10.7 98 129-242 25-122 (219)
120 3adn_A Spermidine synthase; am 99.0 4.6E-10 1.6E-14 104.2 5.8 80 155-241 83-167 (294)
121 3m70_A Tellurite resistance pr 99.0 4.8E-09 1.6E-13 94.9 12.4 76 155-242 120-195 (286)
122 2pwy_A TRNA (adenine-N(1)-)-me 99.0 5.5E-09 1.9E-13 92.5 12.5 79 155-242 96-177 (258)
123 1qam_A ERMC' methyltransferase 98.9 1.4E-09 4.8E-14 97.8 7.9 91 134-243 16-106 (244)
124 1xj5_A Spermidine synthase 1; 98.9 8.2E-09 2.8E-13 97.5 13.5 80 155-240 120-203 (334)
125 3jwh_A HEN1; methyltransferase 98.9 3.5E-09 1.2E-13 91.8 10.0 96 131-241 12-112 (217)
126 1sqg_A SUN protein, FMU protei 98.9 3.4E-09 1.2E-13 102.7 10.6 81 155-243 246-327 (429)
127 3cbg_A O-methyltransferase; cy 98.9 9.5E-09 3.2E-13 91.0 12.6 82 155-240 72-157 (232)
128 3ftd_A Dimethyladenosine trans 98.9 2E-09 6.9E-14 97.6 8.1 91 134-243 17-107 (249)
129 1ve3_A Hypothetical protein PH 98.9 1.1E-08 3.7E-13 88.6 12.3 75 155-240 38-112 (227)
130 2fca_A TRNA (guanine-N(7)-)-me 98.9 5.9E-09 2E-13 91.3 10.5 79 155-240 38-117 (213)
131 2vdv_E TRNA (guanine-N(7)-)-me 98.9 4.4E-09 1.5E-13 93.8 9.7 78 155-238 49-135 (246)
132 2b2c_A Spermidine synthase; be 98.9 2.5E-09 8.4E-14 100.3 8.4 80 155-241 108-191 (314)
133 1dl5_A Protein-L-isoaspartate 98.9 6E-09 2E-13 96.8 10.9 94 134-243 61-156 (317)
134 3fzg_A 16S rRNA methylase; met 98.9 5.7E-09 1.9E-13 92.1 10.1 71 155-237 49-121 (200)
135 4gek_A TRNA (CMO5U34)-methyltr 98.9 1.3E-08 4.3E-13 92.7 12.6 74 155-238 70-146 (261)
136 1uir_A Polyamine aminopropyltr 98.9 4.5E-09 1.5E-13 98.1 9.8 82 155-243 77-163 (314)
137 2hnk_A SAM-dependent O-methylt 98.9 1.5E-08 5E-13 89.7 12.7 85 155-240 60-156 (239)
138 2b25_A Hypothetical protein; s 98.9 8.7E-09 3E-13 96.1 11.7 84 154-243 104-199 (336)
139 3jwg_A HEN1, methyltransferase 98.9 4.9E-09 1.7E-13 90.9 9.2 96 130-240 11-111 (219)
140 1zx0_A Guanidinoacetate N-meth 98.9 2.8E-09 9.4E-14 94.1 7.6 76 155-238 60-135 (236)
141 3orh_A Guanidinoacetate N-meth 98.9 4.3E-09 1.5E-13 93.7 8.8 80 155-242 60-139 (236)
142 1yb2_A Hypothetical protein TA 98.9 5.1E-09 1.8E-13 95.0 9.4 78 155-242 110-190 (275)
143 2pbf_A Protein-L-isoaspartate 98.9 2.3E-08 8E-13 87.2 13.0 85 155-243 80-174 (227)
144 2yxl_A PH0851 protein, 450AA l 98.9 2.9E-09 1E-13 104.0 8.0 82 155-243 259-342 (450)
145 3khk_A Type I restriction-modi 98.9 2E-09 6.8E-14 108.0 6.7 101 128-243 225-341 (544)
146 2xvm_A Tellurite resistance pr 98.9 2E-08 6.9E-13 84.9 11.9 77 155-242 32-108 (199)
147 2yxe_A Protein-L-isoaspartate 98.9 1.4E-08 4.8E-13 87.7 10.9 80 155-243 77-158 (215)
148 3bwc_A Spermidine synthase; SA 98.9 2.3E-08 8E-13 92.7 13.0 83 155-243 95-181 (304)
149 2i7c_A Spermidine synthase; tr 98.9 2.2E-08 7.4E-13 92.0 12.6 81 155-242 78-162 (283)
150 3hem_A Cyclopropane-fatty-acyl 98.8 3E-08 1E-12 90.5 13.6 75 155-241 72-147 (302)
151 1i9g_A Hypothetical protein RV 98.8 1.9E-08 6.4E-13 90.6 11.9 80 155-242 99-182 (280)
152 1vbf_A 231AA long hypothetical 98.8 1.1E-08 3.9E-13 89.3 10.1 90 135-243 57-146 (231)
153 4htf_A S-adenosylmethionine-de 98.8 1.7E-08 6E-13 91.1 11.6 80 155-242 68-147 (285)
154 2ipx_A RRNA 2'-O-methyltransfe 98.8 1E-08 3.5E-13 90.3 9.5 79 155-241 77-157 (233)
155 1jg1_A PIMT;, protein-L-isoasp 98.8 1.4E-08 4.7E-13 89.7 10.3 95 133-243 76-170 (235)
156 1fbn_A MJ fibrillarin homologu 98.8 9.7E-09 3.3E-13 90.5 9.1 80 155-242 74-154 (230)
157 3bus_A REBM, methyltransferase 98.8 3.1E-08 1.1E-12 88.4 12.1 81 155-243 61-141 (273)
158 1i1n_A Protein-L-isoaspartate 98.8 2.4E-08 8.3E-13 87.0 10.2 81 155-243 77-163 (226)
159 3thr_A Glycine N-methyltransfe 98.8 5.5E-08 1.9E-12 87.9 12.5 96 130-238 39-137 (293)
160 3fpf_A Mtnas, putative unchara 98.8 2.5E-08 8.6E-13 93.1 10.4 73 154-238 121-195 (298)
161 3vc1_A Geranyl diphosphate 2-C 98.8 2.2E-08 7.7E-13 92.1 10.0 77 155-240 117-194 (312)
162 3dh0_A SAM dependent methyltra 98.8 2.6E-08 8.8E-13 86.0 9.8 79 155-242 37-117 (219)
163 1vl5_A Unknown conserved prote 98.8 4.1E-08 1.4E-12 87.4 11.0 76 155-240 37-112 (260)
164 1u2z_A Histone-lysine N-methyl 98.8 5E-08 1.7E-12 95.4 12.4 95 132-240 226-332 (433)
165 2pxx_A Uncharacterized protein 98.8 1.1E-08 3.7E-13 87.5 6.8 76 155-241 42-117 (215)
166 3m33_A Uncharacterized protein 98.7 2.9E-08 9.8E-13 87.1 9.5 91 129-241 30-121 (226)
167 3g07_A 7SK snRNA methylphospha 98.7 2.2E-08 7.6E-13 91.7 9.0 49 154-203 45-94 (292)
168 3g5t_A Trans-aconitate 3-methy 98.7 5.5E-08 1.9E-12 88.7 11.5 85 155-241 36-123 (299)
169 1ri5_A MRNA capping enzyme; me 98.7 2.9E-08 9.8E-13 89.4 9.5 80 155-241 64-143 (298)
170 3uzu_A Ribosomal RNA small sub 98.7 1.9E-08 6.4E-13 92.9 8.2 94 135-243 29-126 (279)
171 2o57_A Putative sarcosine dime 98.7 8.6E-08 2.9E-12 86.9 12.4 77 155-240 82-159 (297)
172 2fk8_A Methoxy mycolic acid sy 98.7 4.5E-08 1.5E-12 89.9 10.6 75 155-241 90-165 (318)
173 3g5l_A Putative S-adenosylmeth 98.7 4.3E-08 1.5E-12 86.8 9.7 77 154-242 43-119 (253)
174 1kpg_A CFA synthase;, cyclopro 98.7 6.1E-08 2.1E-12 87.5 10.9 73 155-239 64-137 (287)
175 2ex4_A Adrenal gland protein A 98.7 1.9E-08 6.5E-13 88.7 7.4 77 155-240 79-155 (241)
176 1xxl_A YCGJ protein; structura 98.7 5.2E-08 1.8E-12 86.0 10.2 77 155-241 21-97 (239)
177 3s1s_A Restriction endonucleas 98.7 1.7E-08 5.8E-13 105.1 7.9 108 128-243 295-411 (878)
178 3ofk_A Nodulation protein S; N 98.7 2.3E-08 7.7E-13 86.3 7.6 74 155-241 51-124 (216)
179 1wzn_A SAM-dependent methyltra 98.7 5.7E-08 2E-12 85.7 10.3 72 155-238 41-112 (252)
180 3gjy_A Spermidine synthase; AP 98.7 3.4E-08 1.2E-12 93.0 9.2 78 157-241 91-169 (317)
181 3dtn_A Putative methyltransfer 98.7 4.7E-08 1.6E-12 85.4 9.5 78 154-243 43-121 (234)
182 1qyr_A KSGA, high level kasuga 98.7 2.5E-08 8.6E-13 90.6 7.8 91 136-243 9-102 (252)
183 3sm3_A SAM-dependent methyltra 98.7 4.6E-08 1.6E-12 84.7 9.1 79 155-242 30-112 (235)
184 1yub_A Ermam, rRNA methyltrans 98.7 8.8E-10 3E-14 98.7 -2.0 77 155-243 29-105 (245)
185 3ocj_A Putative exported prote 98.7 1.7E-08 5.7E-13 92.7 6.3 80 155-243 118-199 (305)
186 3dli_A Methyltransferase; PSI- 98.7 4.2E-08 1.4E-12 86.4 8.5 89 129-239 21-109 (240)
187 4azs_A Methyltransferase WBDD; 98.7 5.7E-08 1.9E-12 97.5 10.4 75 155-237 66-140 (569)
188 1pjz_A Thiopurine S-methyltran 98.7 2.9E-08 1E-12 86.1 7.1 77 155-239 22-109 (203)
189 3ujc_A Phosphoethanolamine N-m 98.7 3.9E-08 1.3E-12 86.9 7.8 95 129-242 36-131 (266)
190 3lcc_A Putative methyl chlorid 98.7 2E-08 6.9E-13 88.0 5.8 79 154-242 65-143 (235)
191 1y8c_A S-adenosylmethionine-de 98.7 1.3E-07 4.4E-12 82.4 10.9 90 133-239 20-109 (246)
192 1xtp_A LMAJ004091AAA; SGPP, st 98.7 6.8E-08 2.3E-12 85.0 8.9 76 155-241 93-168 (254)
193 3ufb_A Type I restriction-modi 98.7 3E-08 1E-12 99.1 7.4 103 129-243 198-314 (530)
194 3mgg_A Methyltransferase; NYSG 98.6 1.1E-07 3.9E-12 85.1 10.4 79 155-242 37-116 (276)
195 3g2m_A PCZA361.24; SAM-depende 98.6 5.7E-08 1.9E-12 88.6 8.6 74 155-238 82-157 (299)
196 3ckk_A TRNA (guanine-N(7)-)-me 98.6 1.3E-07 4.4E-12 84.5 10.7 79 155-239 46-131 (235)
197 2p7i_A Hypothetical protein; p 98.6 5.4E-08 1.8E-12 84.7 7.8 82 136-238 29-110 (250)
198 3iv6_A Putative Zn-dependent a 98.6 5.8E-08 2E-12 88.9 8.1 77 155-242 45-121 (261)
199 3e8s_A Putative SAM dependent 98.6 1.9E-07 6.6E-12 80.1 10.8 86 138-242 42-127 (227)
200 2kw5_A SLR1183 protein; struct 98.6 1.5E-07 5.1E-12 80.3 9.9 74 155-240 30-103 (202)
201 3bkw_A MLL3908 protein, S-aden 98.6 1.3E-07 4.6E-12 82.4 9.7 76 155-242 43-118 (243)
202 1r18_A Protein-L-isoaspartate( 98.6 9.1E-08 3.1E-12 83.8 8.6 80 155-243 84-175 (227)
203 3bkx_A SAM-dependent methyltra 98.6 8.2E-08 2.8E-12 85.8 8.2 82 155-242 43-133 (275)
204 3d2l_A SAM-dependent methyltra 98.6 2.1E-07 7E-12 81.2 10.4 72 155-239 33-104 (243)
205 3ou2_A SAM-dependent methyltra 98.6 1.8E-07 6.3E-12 80.1 9.9 71 155-240 46-116 (218)
206 4df3_A Fibrillarin-like rRNA/T 98.6 1.2E-07 4.1E-12 85.5 9.1 103 129-243 55-159 (233)
207 3cgg_A SAM-dependent methyltra 98.6 2E-07 6.7E-12 78.0 9.4 72 155-241 46-117 (195)
208 2p8j_A S-adenosylmethionine-de 98.6 2.3E-07 7.7E-12 79.3 9.6 75 155-240 23-98 (209)
209 1nt2_A Fibrillarin-like PRE-rR 98.6 1.3E-07 4.5E-12 82.9 8.2 78 155-240 57-135 (210)
210 2c7p_A Modification methylase 98.6 7.9E-08 2.7E-12 90.6 7.0 74 155-243 10-83 (327)
211 4fzv_A Putative methyltransfer 98.6 2.2E-07 7.5E-12 88.8 10.1 83 154-243 147-235 (359)
212 2yqz_A Hypothetical protein TT 98.5 2E-07 6.8E-12 82.3 8.9 76 155-241 39-114 (263)
213 3pfg_A N-methyltransferase; N, 98.5 2.2E-07 7.5E-12 82.7 9.3 69 155-239 50-118 (263)
214 3hnr_A Probable methyltransfer 98.5 1.2E-07 4.3E-12 81.7 7.4 73 155-242 45-117 (220)
215 3h2b_A SAM-dependent methyltra 98.5 2.4E-07 8.1E-12 79.1 8.8 71 156-241 42-112 (203)
216 1ej0_A FTSJ; methyltransferase 98.5 2.4E-07 8.3E-12 75.8 8.6 75 155-243 22-100 (180)
217 2gb4_A Thiopurine S-methyltran 98.5 1.2E-07 4.1E-12 85.8 7.3 78 155-240 68-161 (252)
218 3ege_A Putative methyltransfer 98.5 9.6E-08 3.3E-12 85.5 6.3 90 129-241 15-104 (261)
219 1g55_A DNA cytosine methyltran 98.5 6.9E-08 2.3E-12 91.3 5.5 75 157-242 3-79 (343)
220 3e23_A Uncharacterized protein 98.5 2.8E-07 9.5E-12 79.3 8.7 71 155-242 43-113 (211)
221 3l8d_A Methyltransferase; stru 98.5 3.2E-07 1.1E-11 80.1 9.2 75 155-242 53-127 (242)
222 3gu3_A Methyltransferase; alph 98.5 2.3E-07 7.8E-12 84.2 8.5 77 155-242 22-100 (284)
223 2cmg_A Spermidine synthase; tr 98.5 5E-08 1.7E-12 89.0 3.7 74 155-240 72-148 (262)
224 3htx_A HEN1; HEN1, small RNA m 98.5 5.5E-07 1.9E-11 94.2 11.9 94 130-239 703-804 (950)
225 3bgv_A MRNA CAP guanine-N7 met 98.5 5.7E-07 2E-11 82.5 10.7 85 155-241 34-124 (313)
226 3i9f_A Putative type 11 methyl 98.5 1.5E-07 5.1E-12 78.1 5.9 71 155-243 17-87 (170)
227 3id6_C Fibrillarin-like rRNA/T 98.5 6.7E-07 2.3E-11 80.4 10.6 101 130-242 55-157 (232)
228 4hg2_A Methyltransferase type 98.5 2.1E-07 7.1E-12 84.5 6.9 88 129-240 21-108 (257)
229 4gqb_A Protein arginine N-meth 98.5 3E-07 1E-11 93.8 8.8 75 155-239 357-436 (637)
230 3mq2_A 16S rRNA methyltransfer 98.5 3.7E-07 1.3E-11 79.0 8.1 78 155-242 27-109 (218)
231 4fsd_A Arsenic methyltransfera 98.5 6.7E-07 2.3E-11 85.1 10.6 87 155-243 83-178 (383)
232 3g7u_A Cytosine-specific methy 98.5 3.6E-07 1.2E-11 87.6 8.6 79 157-242 3-82 (376)
233 3p2e_A 16S rRNA methylase; met 98.4 2E-07 7E-12 82.6 5.8 80 155-242 24-108 (225)
234 2bm8_A Cephalosporin hydroxyla 98.4 1.6E-07 5.3E-12 83.9 4.6 74 155-240 81-161 (236)
235 2p35_A Trans-aconitate 2-methy 98.4 4.7E-07 1.6E-11 79.8 7.7 72 155-242 33-106 (259)
236 2vdw_A Vaccinia virus capping 98.4 6.7E-07 2.3E-11 82.9 8.7 82 155-238 48-136 (302)
237 3bxo_A N,N-dimethyltransferase 98.4 1.1E-06 3.9E-11 76.3 9.7 67 155-237 40-106 (239)
238 2a14_A Indolethylamine N-methy 98.4 7E-08 2.4E-12 86.9 1.9 48 154-202 54-101 (263)
239 3ggd_A SAM-dependent methyltra 98.4 5.6E-07 1.9E-11 79.1 7.6 81 155-243 56-136 (245)
240 2zig_A TTHA0409, putative modi 98.4 1.2E-06 4.1E-11 80.8 9.8 48 155-204 235-282 (297)
241 3ccf_A Cyclopropane-fatty-acyl 98.4 8E-07 2.7E-11 80.0 8.3 72 155-242 57-128 (279)
242 3dou_A Ribosomal RNA large sub 98.4 6.8E-07 2.3E-11 77.2 7.5 75 155-243 25-103 (191)
243 1qzz_A RDMB, aclacinomycin-10- 98.4 1.3E-06 4.5E-11 81.8 10.0 76 155-241 182-258 (374)
244 2i62_A Nicotinamide N-methyltr 98.4 1.9E-07 6.4E-12 82.6 3.9 82 154-239 55-165 (265)
245 3lcv_B Sisomicin-gentamicin re 98.4 3.2E-07 1.1E-11 84.5 5.2 73 155-238 132-205 (281)
246 1g60_A Adenine-specific methyl 98.3 8.1E-07 2.8E-11 80.4 7.8 61 134-204 199-259 (260)
247 2gs9_A Hypothetical protein TT 98.3 6.7E-07 2.3E-11 76.7 6.8 71 155-242 36-106 (211)
248 3frh_A 16S rRNA methylase; met 98.3 1.1E-06 3.9E-11 80.0 8.5 71 155-238 105-175 (253)
249 1tw3_A COMT, carminomycin 4-O- 98.3 1.8E-06 6.1E-11 80.6 9.2 76 155-241 183-259 (360)
250 2k4m_A TR8_protein, UPF0146 pr 98.3 1.4E-06 4.9E-11 73.5 7.1 87 129-244 14-103 (153)
251 2avn_A Ubiquinone/menaquinone 98.2 2.2E-06 7.5E-11 76.4 8.2 70 155-240 54-123 (260)
252 2r3s_A Uncharacterized protein 98.2 3.4E-06 1.1E-10 77.6 9.4 74 155-238 165-239 (335)
253 3cc8_A Putative methyltransfer 98.2 1E-06 3.6E-11 75.6 5.1 72 155-241 32-103 (230)
254 3opn_A Putative hemolysin; str 98.2 2.9E-07 9.9E-12 82.3 1.0 45 154-199 36-80 (232)
255 1wg8_A Predicted S-adenosylmet 98.2 9.8E-06 3.3E-10 75.1 10.7 80 155-243 22-101 (285)
256 1x19_A CRTF-related protein; m 98.2 7.8E-06 2.7E-10 76.5 10.3 76 155-241 190-266 (359)
257 3ua3_A Protein arginine N-meth 98.2 4.1E-06 1.4E-10 86.1 8.9 99 136-240 392-504 (745)
258 3mcz_A O-methyltransferase; ad 98.2 6.3E-06 2.1E-10 76.7 9.4 77 156-240 180-257 (352)
259 3hp7_A Hemolysin, putative; st 98.1 3.9E-07 1.3E-11 84.7 1.1 43 154-197 84-126 (291)
260 1p91_A Ribosomal RNA large sub 98.1 1.1E-05 3.8E-10 71.8 10.3 72 155-240 85-157 (269)
261 3dp7_A SAM-dependent methyltra 98.1 4E-06 1.4E-10 79.0 7.8 77 155-239 179-256 (363)
262 3gwz_A MMCR; methyltransferase 98.1 1.3E-05 4.6E-10 75.6 11.1 75 155-240 202-277 (369)
263 2g72_A Phenylethanolamine N-me 98.1 6.3E-06 2.1E-10 74.6 8.0 46 154-200 70-115 (289)
264 3i53_A O-methyltransferase; CO 98.1 9.1E-06 3.1E-10 75.2 9.1 72 156-238 170-242 (332)
265 2plw_A Ribosomal RNA methyltra 98.1 4.2E-06 1.4E-10 71.1 6.1 75 155-243 22-118 (201)
266 2ip2_A Probable phenazine-spec 98.1 3.7E-06 1.3E-10 77.7 6.0 74 157-241 169-243 (334)
267 2qrv_A DNA (cytosine-5)-methyl 98.0 8.1E-06 2.8E-10 75.9 7.9 79 155-243 15-95 (295)
268 2nyu_A Putative ribosomal RNA 98.0 3.4E-06 1.1E-10 71.3 4.8 74 155-242 22-108 (196)
269 1vlm_A SAM-dependent methyltra 98.0 1.4E-05 4.7E-10 69.2 7.6 66 155-241 47-112 (219)
270 2wa2_A Non-structural protein 98.0 6.3E-07 2.2E-11 82.3 -1.3 73 155-240 82-157 (276)
271 3cvo_A Methyltransferase-like 98.0 4.6E-05 1.6E-09 67.2 10.5 84 156-242 31-133 (202)
272 4e2x_A TCAB9; kijanose, tetron 97.9 1.1E-05 3.7E-10 77.0 6.7 74 155-241 107-181 (416)
273 2aot_A HMT, histamine N-methyl 97.9 3.5E-05 1.2E-09 69.9 9.3 82 155-238 52-142 (292)
274 3o4f_A Spermidine synthase; am 97.9 2.3E-05 7.9E-10 72.9 8.1 79 155-240 83-166 (294)
275 2oxt_A Nucleoside-2'-O-methylt 97.9 7.4E-07 2.5E-11 81.4 -2.4 73 155-240 74-149 (265)
276 4h0n_A DNMT2; SAH binding, tra 97.8 2.2E-05 7.4E-10 74.1 6.4 76 157-243 4-81 (333)
277 3me5_A Cytosine-specific methy 97.8 4E-05 1.4E-09 75.8 8.2 84 156-243 88-181 (482)
278 3ubt_Y Modification methylase 97.8 2.1E-05 7.3E-10 72.7 5.7 72 158-243 2-73 (331)
279 2qe6_A Uncharacterized protein 97.8 0.0002 7E-09 65.0 12.1 78 156-239 78-165 (274)
280 3qv2_A 5-cytosine DNA methyltr 97.8 2.5E-05 8.5E-10 73.5 5.8 76 156-243 10-88 (327)
281 3c6k_A Spermine synthase; sper 97.8 5E-05 1.7E-09 73.0 8.0 82 155-240 205-293 (381)
282 1af7_A Chemotaxis receptor met 97.7 5.7E-05 2E-09 69.3 6.7 75 156-237 106-219 (274)
283 2p41_A Type II methyltransfera 97.6 7E-06 2.4E-10 76.3 0.0 73 155-242 82-159 (305)
284 1eg2_A Modification methylase 97.6 0.00016 5.3E-09 67.7 7.9 79 132-221 227-311 (319)
285 1boo_A Protein (N-4 cytosine-s 97.5 8.4E-05 2.9E-09 69.4 5.9 60 155-218 252-311 (323)
286 2zfu_A Nucleomethylin, cerebra 97.5 0.00013 4.5E-09 62.5 5.7 60 155-242 67-126 (215)
287 3sso_A Methyltransferase; macr 97.5 0.00021 7.2E-09 69.4 7.7 71 155-239 216-296 (419)
288 3lst_A CALO1 methyltransferase 97.4 9.4E-05 3.2E-09 69.0 4.0 71 155-239 184-255 (348)
289 2qy6_A UPF0209 protein YFCK; s 97.3 0.0003 1E-08 63.9 6.3 83 155-239 60-181 (257)
290 3tka_A Ribosomal RNA small sub 97.3 0.0011 3.7E-08 62.9 10.0 82 155-243 57-140 (347)
291 2xyq_A Putative 2'-O-methyl tr 97.2 0.00035 1.2E-08 64.6 5.8 63 155-241 63-133 (290)
292 1fp2_A Isoflavone O-methyltran 97.2 0.00027 9.2E-09 65.9 5.0 66 155-239 188-254 (352)
293 4auk_A Ribosomal RNA large sub 97.2 0.0005 1.7E-08 65.9 6.3 71 155-242 211-281 (375)
294 1i4w_A Mitochondrial replicati 97.1 0.00092 3.1E-08 63.6 7.8 79 135-219 39-118 (353)
295 4a6d_A Hydroxyindole O-methylt 97.1 0.00081 2.8E-08 63.1 7.3 70 156-237 180-250 (353)
296 1fp1_D Isoliquiritigenin 2'-O- 97.1 0.0005 1.7E-08 64.6 5.3 67 155-240 209-276 (372)
297 2wk1_A NOVP; transferase, O-me 96.8 0.0062 2.1E-07 56.1 10.4 79 155-239 106-217 (282)
298 4ft4_B DNA (cytosine-5)-methyl 96.8 0.0029 9.8E-08 65.5 8.7 57 156-219 212-274 (784)
299 3reo_A (ISO)eugenol O-methyltr 96.8 0.0011 3.8E-08 62.4 5.2 54 155-217 203-257 (368)
300 1zg3_A Isoflavanone 4'-O-methy 96.7 0.0013 4.4E-08 61.4 5.0 68 155-241 193-261 (358)
301 3swr_A DNA (cytosine-5)-methyl 96.7 0.0035 1.2E-07 67.0 8.3 81 155-242 539-629 (1002)
302 3giw_A Protein of unknown func 96.6 0.0018 6.2E-08 59.6 5.2 60 157-218 80-143 (277)
303 3p9c_A Caffeic acid O-methyltr 96.6 0.0019 6.3E-08 60.9 5.2 54 155-217 201-255 (364)
304 3av4_A DNA (cytosine-5)-methyl 96.5 0.0073 2.5E-07 66.2 9.7 82 155-243 850-941 (1330)
305 2py6_A Methyltransferase FKBM; 96.3 0.0097 3.3E-07 57.2 8.2 58 155-213 226-289 (409)
306 3p8z_A Mtase, non-structural p 96.2 0.001 3.4E-08 60.3 0.5 76 155-242 78-155 (267)
307 4dkj_A Cytosine-specific methy 96.1 0.0033 1.1E-07 60.7 4.0 45 156-201 10-60 (403)
308 1g60_A Adenine-specific methyl 95.4 0.0099 3.4E-07 53.3 3.9 32 208-244 5-36 (260)
309 3lkz_A Non-structural protein 95.1 0.0036 1.2E-07 58.3 0.0 74 155-240 94-169 (321)
310 1eg2_A Modification methylase 94.8 0.02 6.7E-07 53.4 4.0 33 207-244 38-71 (319)
311 2ld4_A Anamorsin; methyltransf 94.6 0.011 3.9E-07 48.7 1.8 59 155-238 12-70 (176)
312 1boo_A Protein (N-4 cytosine-s 94.4 0.024 8.1E-07 52.6 3.6 34 206-244 13-46 (323)
313 2zig_A TTHA0409, putative modi 94.0 0.029 1E-06 51.2 3.2 32 207-243 21-52 (297)
314 3evf_A RNA-directed RNA polyme 92.1 0.091 3.1E-06 48.3 3.4 78 155-243 74-152 (277)
315 3gcz_A Polyprotein; flavivirus 91.7 0.1 3.4E-06 48.1 3.3 77 155-244 90-169 (282)
316 2px2_A Genome polyprotein [con 91.7 0.04 1.4E-06 50.3 0.6 74 154-245 72-153 (269)
317 3eld_A Methyltransferase; flav 89.9 0.19 6.5E-06 46.6 3.4 36 154-189 80-116 (300)
318 3pvc_A TRNA 5-methylaminomethy 89.0 0.23 7.9E-06 50.3 3.6 81 156-239 59-179 (689)
319 4fn4_A Short chain dehydrogena 88.2 3.8 0.00013 36.6 10.7 82 154-239 5-92 (254)
320 1f8f_A Benzyl alcohol dehydrog 86.6 1.4 4.6E-05 40.8 7.0 73 155-239 190-266 (371)
321 3r24_A NSP16, 2'-O-methyl tran 86.1 0.56 1.9E-05 43.8 4.0 81 138-242 94-180 (344)
322 2g1p_A DNA adenine methylase; 85.1 0.44 1.5E-05 43.3 2.8 33 156-191 28-60 (278)
323 3ioy_A Short-chain dehydrogena 84.5 6.4 0.00022 35.6 10.4 85 154-241 6-97 (319)
324 4g81_D Putative hexonate dehyd 84.4 3.4 0.00012 36.9 8.3 84 154-241 7-96 (255)
325 3t4x_A Oxidoreductase, short c 84.2 5.6 0.00019 34.7 9.6 84 154-241 8-95 (267)
326 3h7a_A Short chain dehydrogena 83.5 5.3 0.00018 34.6 9.1 82 154-241 5-93 (252)
327 3o38_A Short chain dehydrogena 83.4 5.4 0.00018 34.5 9.1 86 154-242 20-112 (266)
328 1pl8_A Human sorbitol dehydrog 82.9 7.5 0.00026 35.5 10.3 73 155-239 171-250 (356)
329 3lyl_A 3-oxoacyl-(acyl-carrier 82.3 11 0.00039 31.9 10.7 84 154-242 3-93 (247)
330 3lf2_A Short chain oxidoreduct 82.3 8.8 0.0003 33.4 10.1 85 154-242 6-98 (265)
331 3ucx_A Short chain dehydrogena 82.2 10 0.00034 33.0 10.4 81 154-239 9-96 (264)
332 3fpc_A NADP-dependent alcohol 81.7 2.1 7.3E-05 39.2 6.0 72 155-237 166-241 (352)
333 3svt_A Short-chain type dehydr 81.6 7.2 0.00025 34.2 9.3 84 154-240 9-100 (281)
334 3gaf_A 7-alpha-hydroxysteroid 81.6 7 0.00024 33.9 9.1 83 154-241 10-99 (256)
335 3tjr_A Short chain dehydrogena 81.4 7.6 0.00026 34.7 9.5 84 154-242 29-119 (301)
336 3nyw_A Putative oxidoreductase 81.4 7.9 0.00027 33.5 9.3 85 154-241 5-97 (250)
337 3qiv_A Short-chain dehydrogena 81.3 9 0.00031 32.8 9.6 83 154-241 7-96 (253)
338 4ej6_A Putative zinc-binding d 80.8 1.9 6.6E-05 40.0 5.4 44 155-205 182-229 (370)
339 4fs3_A Enoyl-[acyl-carrier-pro 80.7 6.7 0.00023 34.2 8.7 87 153-242 3-97 (256)
340 4fgs_A Probable dehydrogenase 80.7 6.5 0.00022 35.4 8.7 80 154-240 27-112 (273)
341 3s2e_A Zinc-containing alcohol 80.4 4.5 0.00015 36.7 7.7 73 155-239 166-240 (340)
342 4da9_A Short-chain dehydrogena 80.1 6.6 0.00022 34.7 8.5 83 154-241 27-117 (280)
343 1xg5_A ARPG836; short chain de 80.0 12 0.0004 32.7 10.1 84 155-241 31-121 (279)
344 3f1l_A Uncharacterized oxidore 79.5 11 0.00038 32.4 9.7 84 154-241 10-102 (252)
345 3iup_A Putative NADPH:quinone 79.4 1.7 5.9E-05 40.5 4.6 45 155-205 170-218 (379)
346 3ic5_A Putative saccharopine d 79.3 15 0.00053 26.8 9.3 73 156-243 5-81 (118)
347 3pk0_A Short-chain dehydrogena 79.2 7.6 0.00026 33.8 8.5 83 154-240 8-97 (262)
348 1iy8_A Levodione reductase; ox 79.1 12 0.00041 32.4 9.8 84 154-240 11-101 (267)
349 3i1j_A Oxidoreductase, short c 78.8 11 0.00038 32.0 9.4 84 154-241 12-104 (247)
350 3o26_A Salutaridine reductase; 78.5 6.9 0.00023 34.2 8.1 84 155-242 11-102 (311)
351 3rkr_A Short chain oxidoreduct 78.1 9.1 0.00031 33.2 8.7 83 154-241 27-116 (262)
352 2qq5_A DHRS1, dehydrogenase/re 77.7 12 0.00042 32.2 9.4 81 154-239 3-91 (260)
353 3r1i_A Short-chain type dehydr 77.6 7.8 0.00027 34.2 8.2 83 154-241 30-119 (276)
354 1yb1_A 17-beta-hydroxysteroid 77.5 16 0.00056 31.7 10.2 83 154-241 29-118 (272)
355 3sx2_A Putative 3-ketoacyl-(ac 77.2 14 0.00046 32.2 9.6 84 154-242 11-113 (278)
356 2dpm_A M.dpnii 1, protein (ade 77.0 0.84 2.9E-05 41.6 1.6 33 156-191 36-68 (284)
357 3rd5_A Mypaa.01249.C; ssgcid, 76.9 14 0.00047 32.5 9.6 79 154-241 14-96 (291)
358 4dup_A Quinone oxidoreductase; 76.5 6.5 0.00022 36.0 7.5 73 155-239 167-243 (353)
359 2dpm_A M.dpnii 1, protein (ade 76.4 1.9 6.4E-05 39.3 3.7 29 208-243 169-199 (284)
360 3t7c_A Carveol dehydrogenase; 76.4 14 0.00047 32.8 9.6 82 154-240 26-126 (299)
361 3vyw_A MNMC2; tRNA wobble urid 76.3 4.7 0.00016 37.3 6.4 79 156-239 97-194 (308)
362 3fbg_A Putative arginate lyase 76.0 6.6 0.00023 35.7 7.5 40 155-197 150-193 (346)
363 3imf_A Short chain dehydrogena 75.9 7.6 0.00026 33.6 7.5 82 154-240 4-92 (257)
364 3ppi_A 3-hydroxyacyl-COA dehyd 75.5 17 0.00059 31.6 9.8 76 154-238 28-110 (281)
365 3v8b_A Putative dehydrogenase, 75.4 10 0.00036 33.5 8.4 83 154-241 26-115 (283)
366 1p0f_A NADP-dependent alcohol 75.3 3.8 0.00013 37.7 5.7 43 155-204 191-237 (373)
367 3rku_A Oxidoreductase YMR226C; 75.2 15 0.00052 32.5 9.5 84 155-240 32-124 (287)
368 4ibo_A Gluconate dehydrogenase 75.2 8.1 0.00028 34.0 7.6 83 154-241 24-113 (271)
369 3pxx_A Carveol dehydrogenase; 74.7 17 0.00058 31.6 9.5 83 154-241 8-109 (287)
370 3ftp_A 3-oxoacyl-[acyl-carrier 74.5 12 0.0004 32.9 8.5 83 154-241 26-115 (270)
371 2jah_A Clavulanic acid dehydro 74.4 19 0.00065 30.8 9.7 82 154-240 5-93 (247)
372 1cdo_A Alcohol dehydrogenase; 74.4 4.8 0.00016 37.1 6.0 43 155-204 192-238 (374)
373 2rhc_B Actinorhodin polyketide 74.2 23 0.00077 30.9 10.3 81 155-240 21-108 (277)
374 2efj_A 3,7-dimethylxanthine me 74.1 3.9 0.00013 38.9 5.5 21 156-176 53-73 (384)
375 1yf3_A DNA adenine methylase; 74.1 1.3 4.3E-05 39.7 2.0 12 232-243 165-176 (259)
376 1xu9_A Corticosteroid 11-beta- 74.0 11 0.00037 33.0 8.1 80 155-238 27-113 (286)
377 2dph_A Formaldehyde dismutase; 73.8 4.3 0.00015 37.9 5.7 41 155-196 185-227 (398)
378 3gms_A Putative NADPH:quinone 73.8 4.2 0.00014 36.9 5.5 41 155-197 144-187 (340)
379 3grk_A Enoyl-(acyl-carrier-pro 73.7 23 0.00079 31.3 10.3 83 154-241 29-119 (293)
380 2ae2_A Protein (tropinone redu 73.4 24 0.00082 30.3 10.1 82 154-240 7-96 (260)
381 4eso_A Putative oxidoreductase 73.1 15 0.0005 31.8 8.7 80 154-241 6-92 (255)
382 1jw9_B Molybdopterin biosynthe 73.1 7.1 0.00024 34.4 6.6 76 155-239 30-129 (249)
383 2g1p_A DNA adenine methylase; 73.0 2.2 7.6E-05 38.5 3.3 29 207-242 157-185 (278)
384 2jhf_A Alcohol dehydrogenase E 73.0 5.1 0.00017 36.9 5.9 43 155-204 191-237 (374)
385 3uve_A Carveol dehydrogenase ( 73.0 18 0.0006 31.7 9.2 83 154-241 9-114 (286)
386 3sju_A Keto reductase; short-c 72.5 16 0.00054 32.1 8.8 82 155-241 23-111 (279)
387 3uko_A Alcohol dehydrogenase c 72.5 3.8 0.00013 37.9 4.9 44 155-205 193-240 (378)
388 2gn4_A FLAA1 protein, UDP-GLCN 72.5 18 0.00061 32.8 9.4 79 154-242 19-102 (344)
389 2fzw_A Alcohol dehydrogenase c 72.4 4.9 0.00017 36.9 5.6 43 155-204 190-236 (373)
390 3tfo_A Putative 3-oxoacyl-(acy 72.4 15 0.00051 32.2 8.6 81 156-241 4-91 (264)
391 2d8a_A PH0655, probable L-thre 72.4 6 0.00021 36.0 6.2 75 155-240 167-245 (348)
392 3ip1_A Alcohol dehydrogenase, 72.2 7.2 0.00025 36.4 6.8 43 155-204 213-259 (404)
393 3guy_A Short-chain dehydrogena 72.1 14 0.00047 31.1 8.1 75 159-241 4-82 (230)
394 1e3i_A Alcohol dehydrogenase, 72.0 6.6 0.00023 36.2 6.4 43 155-204 195-241 (376)
395 3rih_A Short chain dehydrogena 71.9 14 0.0005 32.8 8.5 83 154-240 39-128 (293)
396 1ae1_A Tropinone reductase-I; 71.9 34 0.0012 29.7 10.8 83 154-241 19-109 (273)
397 3pgx_A Carveol dehydrogenase; 71.8 20 0.00069 31.2 9.3 83 154-241 13-115 (280)
398 3cxt_A Dehydrogenase with diff 71.7 24 0.0008 31.3 9.9 82 154-240 32-120 (291)
399 4dry_A 3-oxoacyl-[acyl-carrier 71.7 11 0.00037 33.3 7.6 84 154-241 31-121 (281)
400 3n74_A 3-ketoacyl-(acyl-carrie 71.6 21 0.00072 30.5 9.3 80 154-241 7-93 (261)
401 1zem_A Xylitol dehydrogenase; 71.5 20 0.00068 30.9 9.2 82 154-240 5-93 (262)
402 3tsc_A Putative oxidoreductase 71.4 23 0.00079 30.8 9.6 83 154-241 9-111 (277)
403 3f9i_A 3-oxoacyl-[acyl-carrier 71.1 30 0.001 29.3 10.1 80 154-242 12-95 (249)
404 3s55_A Putative short-chain de 71.1 23 0.00079 30.8 9.5 83 154-241 8-109 (281)
405 3awd_A GOX2181, putative polyo 71.0 36 0.0012 28.8 10.6 82 154-240 11-99 (260)
406 1vj0_A Alcohol dehydrogenase, 70.9 8.4 0.00029 35.6 6.9 75 155-240 195-276 (380)
407 4e6p_A Probable sorbitol dehyd 70.7 27 0.00091 30.0 9.8 80 154-241 6-92 (259)
408 2b4q_A Rhamnolipids biosynthes 70.6 13 0.00043 32.7 7.7 81 154-240 27-114 (276)
409 3f6p_A Transcriptional regulat 70.2 20 0.00069 26.3 7.8 52 179-239 3-54 (120)
410 3llv_A Exopolyphosphatase-rela 70.0 22 0.00074 27.4 8.2 70 156-240 6-79 (141)
411 3b5i_A S-adenosyl-L-methionine 69.3 8.1 0.00028 36.5 6.4 21 156-176 53-73 (374)
412 3gl9_A Response regulator; bet 69.2 20 0.00068 26.5 7.6 52 179-239 3-54 (122)
413 1wma_A Carbonyl reductase [NAD 69.2 35 0.0012 28.8 10.1 80 156-240 4-91 (276)
414 3eod_A Protein HNR; response r 69.1 21 0.00071 26.4 7.7 54 178-240 7-60 (130)
415 3jv7_A ADH-A; dehydrogenase, n 69.1 10 0.00035 34.3 6.9 44 155-205 171-218 (345)
416 1kol_A Formaldehyde dehydrogen 69.1 8.2 0.00028 35.8 6.4 40 155-197 185-228 (398)
417 3uog_A Alcohol dehydrogenase; 69.0 15 0.00053 33.5 8.2 74 155-240 189-266 (363)
418 1fmc_A 7 alpha-hydroxysteroid 68.9 29 0.001 29.2 9.5 82 154-240 9-97 (255)
419 1xkq_A Short-chain reductase f 68.8 16 0.00056 31.8 8.1 84 154-240 4-95 (280)
420 1geg_A Acetoin reductase; SDR 68.5 33 0.0011 29.3 9.9 79 157-240 3-88 (256)
421 1w6u_A 2,4-dienoyl-COA reducta 68.4 34 0.0012 29.8 10.1 82 154-240 24-113 (302)
422 3rwb_A TPLDH, pyridoxal 4-dehy 68.3 15 0.00052 31.5 7.6 80 154-241 4-90 (247)
423 3gvc_A Oxidoreductase, probabl 68.3 17 0.00059 32.0 8.1 80 154-241 27-113 (277)
424 3v2h_A D-beta-hydroxybutyrate 68.1 25 0.00087 30.8 9.2 84 154-241 23-114 (281)
425 4iin_A 3-ketoacyl-acyl carrier 68.1 23 0.0008 30.6 8.9 84 154-242 27-118 (271)
426 4dmm_A 3-oxoacyl-[acyl-carrier 67.9 24 0.00084 30.7 9.0 83 154-241 26-116 (269)
427 1vl8_A Gluconate 5-dehydrogena 67.8 30 0.001 30.0 9.6 83 154-241 19-109 (267)
428 3ai3_A NADPH-sorbose reductase 67.8 48 0.0016 28.3 10.8 83 154-241 5-95 (263)
429 3oec_A Carveol dehydrogenase ( 67.6 28 0.00097 31.1 9.5 83 154-241 44-145 (317)
430 3to5_A CHEY homolog; alpha(5)b 66.8 10 0.00034 30.2 5.7 52 180-239 14-65 (134)
431 3grc_A Sensor protein, kinase; 66.2 19 0.00066 27.0 7.1 53 179-240 7-59 (140)
432 3oig_A Enoyl-[acyl-carrier-pro 66.1 21 0.00072 30.7 8.1 86 154-242 5-98 (266)
433 3kht_A Response regulator; PSI 66.1 23 0.00079 26.7 7.6 55 179-240 6-60 (144)
434 2z1n_A Dehydrogenase; reductas 65.8 63 0.0021 27.5 11.5 84 154-241 5-95 (260)
435 1e7w_A Pteridine reductase; di 65.8 23 0.00079 31.2 8.5 58 155-217 8-71 (291)
436 4eye_A Probable oxidoreductase 65.7 14 0.00047 33.6 7.1 73 155-239 159-235 (342)
437 4fc7_A Peroxisomal 2,4-dienoyl 65.5 25 0.00085 30.7 8.5 82 154-240 25-114 (277)
438 4dqx_A Probable oxidoreductase 65.2 33 0.0011 30.0 9.3 80 154-241 25-111 (277)
439 2c0c_A Zinc binding alcohol de 65.1 11 0.00038 34.5 6.4 74 155-239 163-239 (362)
440 3edm_A Short chain dehydrogena 64.9 23 0.0008 30.5 8.2 81 154-239 6-94 (259)
441 3tox_A Short chain dehydrogena 64.8 11 0.00038 33.3 6.1 82 154-240 6-94 (280)
442 3ps9_A TRNA 5-methylaminomethy 64.8 7.7 0.00026 38.8 5.6 111 128-242 35-189 (676)
443 2zat_A Dehydrogenase/reductase 64.7 46 0.0016 28.4 10.0 82 154-240 12-100 (260)
444 1oaa_A Sepiapterin reductase; 64.6 18 0.0006 31.1 7.3 84 154-240 4-101 (259)
445 1xhl_A Short-chain dehydrogena 64.5 28 0.00096 30.8 8.8 83 155-240 25-115 (297)
446 3fwz_A Inner membrane protein 64.4 25 0.00085 27.4 7.6 69 157-242 8-82 (140)
447 3ijr_A Oxidoreductase, short c 64.4 29 0.00099 30.6 8.9 83 154-240 45-134 (291)
448 3cg4_A Response regulator rece 64.4 30 0.001 25.9 7.8 54 178-240 7-60 (142)
449 1ja9_A 4HNR, 1,3,6,8-tetrahydr 64.2 59 0.002 27.6 10.6 83 154-241 19-109 (274)
450 2uvd_A 3-oxoacyl-(acyl-carrier 64.1 32 0.0011 29.2 8.9 82 155-241 3-92 (246)
451 3uf0_A Short-chain dehydrogena 63.9 24 0.00082 30.9 8.1 82 154-241 29-116 (273)
452 3gt7_A Sensor protein; structu 63.6 23 0.0008 27.3 7.3 53 179-240 8-60 (154)
453 3lte_A Response regulator; str 63.2 24 0.0008 26.1 7.0 54 179-241 7-60 (132)
454 3tzq_B Short-chain type dehydr 63.2 21 0.0007 31.1 7.5 81 154-242 9-96 (271)
455 1rjw_A ADH-HT, alcohol dehydro 62.9 12 0.0004 33.9 6.0 38 155-196 164-205 (339)
456 3e03_A Short chain dehydrogena 62.9 25 0.00086 30.6 8.1 83 154-241 4-100 (274)
457 3i42_A Response regulator rece 62.8 20 0.00068 26.4 6.4 52 180-240 5-56 (127)
458 3h8v_A Ubiquitin-like modifier 62.7 17 0.00058 33.1 7.0 61 154-215 34-114 (292)
459 1gee_A Glucose 1-dehydrogenase 62.4 38 0.0013 28.7 9.0 81 155-240 6-94 (261)
460 1zk4_A R-specific alcohol dehy 62.3 21 0.00074 30.0 7.3 81 154-240 4-91 (251)
461 1m6e_X S-adenosyl-L-methionnin 62.2 1.8 6.1E-05 40.9 0.3 78 156-238 52-146 (359)
462 4dzz_A Plasmid partitioning pr 62.1 24 0.00081 28.7 7.4 62 173-243 26-87 (206)
463 3jyn_A Quinone oxidoreductase; 62.0 14 0.00047 33.2 6.3 74 155-239 140-217 (325)
464 1xq1_A Putative tropinone redu 61.9 35 0.0012 29.1 8.7 82 154-240 12-101 (266)
465 3grp_A 3-oxoacyl-(acyl carrier 61.9 33 0.0011 29.8 8.7 80 154-241 25-111 (266)
466 3d3w_A L-xylulose reductase; u 61.8 46 0.0016 27.8 9.3 77 154-240 5-85 (244)
467 1piw_A Hypothetical zinc-type 61.7 25 0.00084 32.1 8.0 68 155-239 179-251 (360)
468 4dcm_A Ribosomal RNA large sub 61.6 12 0.00042 34.9 6.0 74 155-243 38-112 (375)
469 3cg0_A Response regulator rece 61.5 16 0.00053 27.4 5.7 54 178-239 9-62 (140)
470 2x9g_A PTR1, pteridine reducta 61.5 21 0.00072 31.2 7.3 82 154-240 21-115 (288)
471 3pi7_A NADH oxidoreductase; gr 61.4 7.9 0.00027 35.2 4.6 39 156-196 164-206 (349)
472 2qhx_A Pteridine reductase 1; 61.2 30 0.001 31.2 8.5 58 155-217 45-108 (328)
473 1hdc_A 3-alpha, 20 beta-hydrox 61.1 31 0.0011 29.6 8.2 80 154-241 3-89 (254)
474 3t6k_A Response regulator rece 61.0 26 0.00089 26.4 6.9 52 179-239 5-56 (136)
475 3l6e_A Oxidoreductase, short-c 60.8 30 0.001 29.4 8.0 78 156-241 3-87 (235)
476 2rdm_A Response regulator rece 60.7 37 0.0013 24.9 7.7 54 179-241 6-60 (132)
477 3sc4_A Short chain dehydrogena 60.7 23 0.0008 31.0 7.5 83 154-241 7-103 (285)
478 2pnf_A 3-oxoacyl-[acyl-carrier 60.2 56 0.0019 27.2 9.6 83 154-241 5-95 (248)
479 2qxy_A Response regulator; reg 59.9 29 0.001 26.0 7.1 52 179-239 5-56 (142)
480 1h2b_A Alcohol dehydrogenase; 59.8 23 0.00077 32.3 7.4 42 155-204 186-232 (359)
481 2hcy_A Alcohol dehydrogenase 1 59.7 18 0.0006 32.8 6.6 41 155-197 169-212 (347)
482 3a10_A Response regulator; pho 59.6 33 0.0011 24.6 7.1 51 180-239 3-53 (116)
483 2c07_A 3-oxoacyl-(acyl-carrier 59.6 43 0.0015 29.1 9.0 83 154-241 42-131 (285)
484 3h5i_A Response regulator/sens 59.5 38 0.0013 25.4 7.7 54 179-240 6-59 (140)
485 1hxh_A 3BETA/17BETA-hydroxyste 59.4 28 0.00095 29.8 7.6 80 154-241 4-90 (253)
486 4eez_A Alcohol dehydrogenase 1 59.3 46 0.0016 29.8 9.4 78 154-240 162-241 (348)
487 1yxm_A Pecra, peroxisomal tran 59.1 61 0.0021 28.2 10.0 84 154-240 16-109 (303)
488 1uuf_A YAHK, zinc-type alcohol 59.1 30 0.001 31.8 8.2 68 155-239 194-265 (369)
489 2o23_A HADH2 protein; HSD17B10 59.0 46 0.0016 28.2 8.9 80 154-241 10-96 (265)
490 1pqw_A Polyketide synthase; ro 58.9 16 0.00056 29.9 5.8 39 155-196 38-80 (198)
491 1zud_1 Adenylyltransferase THI 58.8 26 0.00087 30.7 7.3 33 155-187 27-61 (251)
492 3tos_A CALS11; methyltransfera 58.8 68 0.0023 28.6 10.2 83 156-239 70-190 (257)
493 3afn_B Carbonyl reductase; alp 58.4 32 0.0011 28.9 7.8 82 155-241 6-95 (258)
494 1mxh_A Pteridine reductase 2; 58.3 44 0.0015 28.8 8.7 81 155-240 10-103 (276)
495 3l77_A Short-chain alcohol deh 58.3 79 0.0027 26.2 11.0 80 156-241 2-90 (235)
496 1v3u_A Leukotriene B4 12- hydr 58.3 22 0.00075 31.8 7.0 39 155-195 145-186 (333)
497 4imr_A 3-oxoacyl-(acyl-carrier 58.3 21 0.00073 31.2 6.8 82 154-241 31-119 (275)
498 3c3m_A Response regulator rece 58.3 31 0.0011 25.9 6.9 52 179-239 4-55 (138)
499 4egf_A L-xylulose reductase; s 58.0 38 0.0013 29.3 8.3 83 154-241 18-108 (266)
500 3tnl_A Shikimate dehydrogenase 58.0 60 0.0021 29.6 10.0 79 154-243 152-238 (315)
No 1
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.95 E-value=2.1e-27 Score=204.37 Aligned_cols=167 Identities=28% Similarity=0.453 Sum_probs=140.8
Q ss_pred ceEEEEeeeeCCeEEecCCCCCCCCCHHHHHHHHHHHHHhcCCCCCCCCCCEEEEECCccchHHHHHHHcCCCEEEEEeC
Q 022298 107 RLLQVLGGKARRKKLLSPKGMDVRPMMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEM 186 (299)
Q Consensus 107 ~~mrIi~Gk~~Gr~L~~p~~~~~RPttd~Vrealfn~L~~~~~~~~~~~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~ 186 (299)
+||||++|+|+|+++..|. ..+||+++.+++.+++++..... .++.+|||+|||+|.++++++++|+.+|+++|+
T Consensus 1 ~m~rii~g~~~g~~l~~~~-~~~rp~~~~~~~~l~~~l~~~~~----~~~~~vLDlgcG~G~~~~~~~~~~~~~v~~vD~ 75 (189)
T 3p9n_A 1 SMTRIIGGVAGGRRIAVPP-RGTRPTTDRVRESLFNIVTARRD----LTGLAVLDLYAGSGALGLEALSRGAASVLFVES 75 (189)
T ss_dssp CEEECCSSTTTTCEEECCS-CCC---CHHHHHHHHHHHHHHSC----CTTCEEEEETCTTCHHHHHHHHTTCSEEEEEEC
T ss_pred CceEEEeeccCCcEecCCC-CCCccCcHHHHHHHHHHHHhccC----CCCCEEEEeCCCcCHHHHHHHHCCCCeEEEEEC
Confidence 4899999999999999998 67899999999999999976421 368899999999999999999999889999999
Q ss_pred CHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCeeEEEEcCCCCCC--C------------------e
Q 022298 187 DPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTAV--D------------------Y 246 (299)
Q Consensus 187 n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fDlI~iDPPY~~~--~------------------~ 246 (299)
|+.++ +.+++|++.+++ ++++++++|+.++.... ..++||+|++||||... . .
T Consensus 76 ~~~~~-~~a~~~~~~~~~-~~v~~~~~d~~~~~~~~-----~~~~fD~i~~~~p~~~~~~~~~~~l~~~~~~~~L~pgG~ 148 (189)
T 3p9n_A 76 DQRSA-AVIARNIEALGL-SGATLRRGAVAAVVAAG-----TTSPVDLVLADPPYNVDSADVDAILAALGTNGWTREGTV 148 (189)
T ss_dssp CHHHH-HHHHHHHHHHTC-SCEEEEESCHHHHHHHC-----CSSCCSEEEECCCTTSCHHHHHHHHHHHHHSSSCCTTCE
T ss_pred CHHHH-HHHHHHHHHcCC-CceEEEEccHHHHHhhc-----cCCCccEEEECCCCCcchhhHHHHHHHHHhcCccCCCeE
Confidence 99998 999999999998 56999999999886432 24789999999999863 1 1
Q ss_pred EEEEecCCCCCCCCCCCeEEEEEeeecceEEEEeecchh
Q 022298 247 EVVEYPLRTDMLDTCGCLVKIKDRRFGRTHLAIYGPDWA 285 (299)
Q Consensus 247 ~~vE~~~~~~~~~~~~~l~~~~~r~YG~t~l~~y~~~~~ 285 (299)
.++|+.....++....+|...++|+||.+.++||++.++
T Consensus 149 l~~~~~~~~~~~~~~~~~~~~~~~~yg~~~~~~~~~~~~ 187 (189)
T 3p9n_A 149 AVVERATTCAPLTWPEGWRRWPQRVYGDTRLELAERLFA 187 (189)
T ss_dssp EEEEEETTSCCCCCCTTEEECCCEEETTEEEEEEEEC--
T ss_pred EEEEecCCCCCccCCCceEEEEEcccCcEEEEEeccccc
Confidence 248888877777777789999999999999999998763
No 2
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.93 E-value=2e-25 Score=195.52 Aligned_cols=165 Identities=24% Similarity=0.385 Sum_probs=133.9
Q ss_pred ceEEEEeeeeCCeEEecCCCCCCCCCHHHHHHHHHHHHHhcCCCCCCCCCCEEEEECCccchHHHHHHHcCCCEEEEEeC
Q 022298 107 RLLQVLGGKARRKKLLSPKGMDVRPMMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEM 186 (299)
Q Consensus 107 ~~mrIi~Gk~~Gr~L~~p~~~~~RPttd~Vrealfn~L~~~~~~~~~~~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~ 186 (299)
+.|||++|+|+|+.+..|++..+||+++.+++.+++++... ..+.+|||+|||+|.++++++++|+.+|++||+
T Consensus 12 ~~~~ii~g~~~g~~l~~~~~~~~rp~~~~~~~~l~~~l~~~------~~~~~vLDlgcG~G~~~~~l~~~~~~~V~~vD~ 85 (202)
T 2fpo_A 12 GQIRIIGGQWRGRKLPVPDSPGLRPTTDRVRETLFNWLAPV------IVDAQCLDCFAGSGALGLEALSRYAAGATLIEM 85 (202)
T ss_dssp CEEECCSGGGTTCEEECCCC------CHHHHHHHHHHHHHH------HTTCEEEETTCTTCHHHHHHHHTTCSEEEEECS
T ss_pred ceEEEEEEEEcCcEecCCCCCCCCCCHHHHHHHHHHHHHhh------cCCCeEEEeCCCcCHHHHHHHhcCCCEEEEEEC
Confidence 46899999999999999998889999999999999998752 257899999999999999999999889999999
Q ss_pred CHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCeeEEEEcCCCCCCCe------------------EE
Q 022298 187 DPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTAVDY------------------EV 248 (299)
Q Consensus 187 n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fDlI~iDPPY~~~~~------------------~~ 248 (299)
|+.++ +.+++|++.+++ ++++++++|+.+++.. ..++||+|++||||..... .+
T Consensus 86 s~~~l-~~a~~~~~~~~~-~~v~~~~~D~~~~~~~------~~~~fD~V~~~~p~~~~~~~~~l~~l~~~~~L~pgG~l~ 157 (202)
T 2fpo_A 86 DRAVS-QQLIKNLATLKA-GNARVVNSNAMSFLAQ------KGTPHNIVFVDPPFRRGLLEETINLLEDNGWLADEALIY 157 (202)
T ss_dssp CHHHH-HHHHHHHHHTTC-CSEEEECSCHHHHHSS------CCCCEEEEEECCSSSTTTHHHHHHHHHHTTCEEEEEEEE
T ss_pred CHHHH-HHHHHHHHHcCC-CcEEEEECCHHHHHhh------cCCCCCEEEECCCCCCCcHHHHHHHHHhcCccCCCcEEE
Confidence 99998 999999999988 5689999999886521 2468999999999875321 12
Q ss_pred EEecCCCCCCCCCCCeEEEEEeeecceEEEEeecchh
Q 022298 249 VEYPLRTDMLDTCGCLVKIKDRRFGRTHLAIYGPDWA 285 (299)
Q Consensus 249 vE~~~~~~~~~~~~~l~~~~~r~YG~t~l~~y~~~~~ 285 (299)
+++.....++....+|.+.++++||.+.+.||+...+
T Consensus 158 i~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 194 (202)
T 2fpo_A 158 VESEVENGLPTVPANWSLHREKVAGQVAYRLYQREAQ 194 (202)
T ss_dssp EEEEGGGCSCCCCTTEEEEEEEEETTEEEEEEEECCC
T ss_pred EEECCCccccccCCcceEEeeeccCCEEEEEEEECCC
Confidence 6766655555556789999999999999999986443
No 3
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.93 E-value=2.7e-25 Score=194.47 Aligned_cols=167 Identities=26% Similarity=0.337 Sum_probs=130.3
Q ss_pred ceEEEEeeeeCCeEEecCCCCCCCCCHHHHHHHHHHHHHhcCCCCCCCCCCEEEEECCccchHHHHHHHcCCCEEEEEeC
Q 022298 107 RLLQVLGGKARRKKLLSPKGMDVRPMMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEM 186 (299)
Q Consensus 107 ~~mrIi~Gk~~Gr~L~~p~~~~~RPttd~Vrealfn~L~~~~~~~~~~~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~ 186 (299)
..|||++|+|+|+++..|.+..+||+++.+++.+++++... ..+.+|||+|||+|.++++++++|+.+|++||+
T Consensus 11 ~~~~ii~G~~~g~~l~~~~~~~~rp~~~~~~~~l~~~l~~~------~~~~~vLDlGcGtG~~~~~~~~~~~~~v~gvD~ 84 (201)
T 2ift_A 11 GEVRIIAGLWRGRKLPVLNSEGLRPTGDRVKETLFNWLMPY------IHQSECLDGFAGSGSLGFEALSRQAKKVTFLEL 84 (201)
T ss_dssp CEEECCSSTTTTCEEECC---------CHHHHHHHHHHHHH------HTTCEEEETTCTTCHHHHHHHHTTCSEEEEECS
T ss_pred CceEEEEeeeCCcEecCCCCCCcCcCHHHHHHHHHHHHHHh------cCCCeEEEcCCccCHHHHHHHHccCCEEEEEEC
Confidence 46899999999999999998889999999999999998752 257899999999999999999999889999999
Q ss_pred CHHHHHHHHHHHHHHhCCC-CcEEEEEcchhhHHHHHhhhcCCCCC-eeEEEEcCCCCCCCe------------------
Q 022298 187 DPWVVSNVLIPNLEWTGFL-DVSSIHTVRVETFLERAEQFVGKDGP-FDYMSVTPPYTAVDY------------------ 246 (299)
Q Consensus 187 n~~Al~~~a~~N~~~~g~~-~~~~vi~~D~~~~l~~~~~~~~~~~~-fDlI~iDPPY~~~~~------------------ 246 (299)
|+.++ +.+++|++.+++. ++++++++|+.+++... ..+. ||+|++||||.....
T Consensus 85 s~~~l-~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~-----~~~~~fD~I~~~~~~~~~~~~~~l~~~~~~~~LkpgG~ 158 (201)
T 2ift_A 85 DKTVA-NQLKKNLQTLKCSSEQAEVINQSSLDFLKQP-----QNQPHFDVVFLDPPFHFNLAEQAISLLCENNWLKPNAL 158 (201)
T ss_dssp CHHHH-HHHHHHHHHTTCCTTTEEEECSCHHHHTTSC-----CSSCCEEEEEECCCSSSCHHHHHHHHHHHTTCEEEEEE
T ss_pred CHHHH-HHHHHHHHHhCCCccceEEEECCHHHHHHhh-----ccCCCCCEEEECCCCCCccHHHHHHHHHhcCccCCCcE
Confidence 99998 9999999999984 46899999998764210 1357 999999999874221
Q ss_pred EEEEecCCCCCCCCCCCeEEEEEeeecceEEEEeecchhh
Q 022298 247 EVVEYPLRTDMLDTCGCLVKIKDRRFGRTHLAIYGPDWAQ 286 (299)
Q Consensus 247 ~~vE~~~~~~~~~~~~~l~~~~~r~YG~t~l~~y~~~~~~ 286 (299)
.++++.... +++....|.++++|+||.+.+.||++..+.
T Consensus 159 l~i~~~~~~-~~~~~~~~~~~~~~~yG~~~~~~~~~~~~~ 197 (201)
T 2ift_A 159 IYVETEKDK-PLITPENWTLLKEKTTGIVSYRLYQNLEHH 197 (201)
T ss_dssp EEEEEESSS-CCCCCTTEEEEEEEEETTEEEEEEEECC--
T ss_pred EEEEECCCC-CccccchhHHHHHHhcCCEEEEEEecchhc
Confidence 126666555 555667899999999999999999987643
No 4
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.92 E-value=1e-24 Score=185.25 Aligned_cols=167 Identities=26% Similarity=0.427 Sum_probs=139.8
Q ss_pred ceEEEEeeeeCCeEEecCCCCCCCCCHHHHHHHHHHHHHhcCCCCCCCCCCEEEEECCccchHHHHHHHcCCCEEEEEeC
Q 022298 107 RLLQVLGGKARRKKLLSPKGMDVRPMMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEM 186 (299)
Q Consensus 107 ~~mrIi~Gk~~Gr~L~~p~~~~~RPttd~Vrealfn~L~~~~~~~~~~~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~ 186 (299)
+||+|++|+|+|+++..|.+..+||+++.+++.+++.+... ..+.+|||+|||+|.++++++++|+.+|+++|+
T Consensus 2 ~~~~i~~g~~~~~~~~~~~~~~~rp~~~~~~~~~~~~l~~~------~~~~~vLD~GcG~G~~~~~~~~~~~~~v~~vD~ 75 (187)
T 2fhp_A 2 NAMRVISGEYGGRRLKALDGDNTRPTTDKVKESIFNMIGPY------FDGGMALDLYSGSGGLAIEAVSRGMDKSICIEK 75 (187)
T ss_dssp -CCBCCSSTTTTCBCCCCCCCSSCCCCHHHHHHHHHHHCSC------CSSCEEEETTCTTCHHHHHHHHTTCSEEEEEES
T ss_pred CceEEeeccccCccccCCCCCCcCcCHHHHHHHHHHHHHhh------cCCCCEEEeCCccCHHHHHHHHcCCCEEEEEEC
Confidence 58999999999999999998889999999999999998642 357899999999999999999998889999999
Q ss_pred CHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCeeEEEEcCCCCCCC------------------eEE
Q 022298 187 DPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTAVD------------------YEV 248 (299)
Q Consensus 187 n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fDlI~iDPPY~~~~------------------~~~ 248 (299)
|+.++ +.+++|++.+++.++++++++|+.+++.... ...++||+|++||||.... ..+
T Consensus 76 ~~~~~-~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~---~~~~~fD~i~~~~~~~~~~~~~~~~~l~~~~~L~~gG~l~ 151 (187)
T 2fhp_A 76 NFAAL-KVIKENIAITKEPEKFEVRKMDANRALEQFY---EEKLQFDLVLLDPPYAKQEIVSQLEKMLERQLLTNEAVIV 151 (187)
T ss_dssp CHHHH-HHHHHHHHHHTCGGGEEEEESCHHHHHHHHH---HTTCCEEEEEECCCGGGCCHHHHHHHHHHTTCEEEEEEEE
T ss_pred CHHHH-HHHHHHHHHhCCCcceEEEECcHHHHHHHHH---hcCCCCCEEEECCCCCchhHHHHHHHHHHhcccCCCCEEE
Confidence 99998 9999999999986679999999988764321 1246899999999987322 113
Q ss_pred EEecCCCCCCCCCCCeEEEEEeeecceEEEEeecc
Q 022298 249 VEYPLRTDMLDTCGCLVKIKDRRFGRTHLAIYGPD 283 (299)
Q Consensus 249 vE~~~~~~~~~~~~~l~~~~~r~YG~t~l~~y~~~ 283 (299)
+++.....++....+|...++++||.+.++||++.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 186 (187)
T 2fhp_A 152 CETDKTVKLPETIGTLKKTRETVYGITQVTIYRQE 186 (187)
T ss_dssp EEEETTCCCCSEETTEEEEEEEEETTEEEEEEEC-
T ss_pred EEeCCcccccccccchhhhhhhccCceEEEEEEec
Confidence 77777666665566899999999999999999854
No 5
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.86 E-value=7.3e-21 Score=158.81 Aligned_cols=151 Identities=34% Similarity=0.549 Sum_probs=123.7
Q ss_pred eEEEEeeeeCCeEEecCCCCCCCCCHHHHHHHHHHHHHhcCCCCCCC-CCCEEEEECCccchHHHHHHHcCCCEEEEEeC
Q 022298 108 LLQVLGGKARRKKLLSPKGMDVRPMMEVVKGAAFDILQSAGGCPASL-RPGRWLDLYSGTGSVGIEAISRGCSEVHFVEM 186 (299)
Q Consensus 108 ~mrIi~Gk~~Gr~L~~p~~~~~RPttd~Vrealfn~L~~~~~~~~~~-~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~ 186 (299)
||||++|+|+|+.+..+++ .||+++.+++.+++.+... + .+.+|||+|||+|.++++++.+|.. |+++|+
T Consensus 1 ~~~i~~g~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~------~~~~~~vLD~GcG~G~~~~~l~~~~~~-v~~vD~ 71 (171)
T 1ws6_A 1 VVRILGGKARGVALKVPAS--ARPSPVRLRKALFDYLRLR------YPRRGRFLDPFAGSGAVGLEAASEGWE-AVLVEK 71 (171)
T ss_dssp CEECCSGGGTTCEECCCTT--CCCCCHHHHHHHHHHHHHH------CTTCCEEEEETCSSCHHHHHHHHTTCE-EEEECC
T ss_pred CceEeecccCCeEecCCCC--CCCCHHHHHHHHHHHHHhh------ccCCCeEEEeCCCcCHHHHHHHHCCCe-EEEEeC
Confidence 7899999999999999998 8999999999999998753 2 5789999999999999999999876 999999
Q ss_pred CHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCeeEEEEcCCCCCCCe------------------EE
Q 022298 187 DPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTAVDY------------------EV 248 (299)
Q Consensus 187 n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fDlI~iDPPY~~~~~------------------~~ 248 (299)
|+.++ +.+++|++.++. +++++++|+.+++.... ...++||+|++||||. ... .+
T Consensus 72 ~~~~~-~~a~~~~~~~~~--~~~~~~~d~~~~~~~~~---~~~~~~D~i~~~~~~~-~~~~~~~~~~~~~~~L~~gG~~~ 144 (171)
T 1ws6_A 72 DPEAV-RLLKENVRRTGL--GARVVALPVEVFLPEAK---AQGERFTVAFMAPPYA-MDLAALFGELLASGLVEAGGLYV 144 (171)
T ss_dssp CHHHH-HHHHHHHHHHTC--CCEEECSCHHHHHHHHH---HTTCCEEEEEECCCTT-SCTTHHHHHHHHHTCEEEEEEEE
T ss_pred CHHHH-HHHHHHHHHcCC--ceEEEeccHHHHHHhhh---ccCCceEEEEECCCCc-hhHHHHHHHHHhhcccCCCcEEE
Confidence 99998 999999999987 48899999988764331 1124799999999996 221 11
Q ss_pred EEecCCCCCCCCCCCeEEEEEeeecceEEEEee
Q 022298 249 VEYPLRTDMLDTCGCLVKIKDRRFGRTHLAIYG 281 (299)
Q Consensus 249 vE~~~~~~~~~~~~~l~~~~~r~YG~t~l~~y~ 281 (299)
+++.....++ ..++++||.+.++||+
T Consensus 145 ~~~~~~~~~~-------~~~~~~y~~~~~~~~~ 170 (171)
T 1ws6_A 145 LQHPKDLYLP-------LGERRVYGENALTLVE 170 (171)
T ss_dssp EEEETTSCCT-------TSEEEEETTEEEEEEE
T ss_pred EEeCCccCCc-------hhhhhccCcEEEEEEE
Confidence 5554443332 4578899999999986
No 6
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.85 E-value=9e-21 Score=160.48 Aligned_cols=152 Identities=26% Similarity=0.391 Sum_probs=112.5
Q ss_pred EEecCCCCCCCCCHHHHHHHHHHHHHhcCCCCCCCCCCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHH
Q 022298 120 KLLSPKGMDVRPMMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNL 199 (299)
Q Consensus 120 ~L~~p~~~~~RPttd~Vrealfn~L~~~~~~~~~~~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~ 199 (299)
+|..|++..+||+++.+++.+++.+... ..+.+|||+|||+|.++++++++|..+|+++|+|+.++ +.+++|+
T Consensus 2 ~l~~p~~~~~rp~~~~~~~~~~~~l~~~------~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~vD~~~~~~-~~a~~~~ 74 (177)
T 2esr_A 2 SLKTLDGKITRPTSDKVRGAIFNMIGPY------FNGGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQ-AIIQDNI 74 (177)
T ss_dssp ----------------CHHHHHHHHCSC------CCSCEEEEETCTTCHHHHHHHHTTCCEEEEECCCHHHH-HHHHHHH
T ss_pred cccCCCCCCCCcCHHHHHHHHHHHHHhh------cCCCeEEEeCCCCCHHHHHHHHcCCCEEEEEECCHHHH-HHHHHHH
Confidence 4677888889999999999999998632 35789999999999999999999877999999999998 9999999
Q ss_pred HHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCeeEEEEcCCCCCC------------------CeEEEEecCCCCCCCCC
Q 022298 200 EWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTAV------------------DYEVVEYPLRTDMLDTC 261 (299)
Q Consensus 200 ~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fDlI~iDPPY~~~------------------~~~~vE~~~~~~~~~~~ 261 (299)
+.+++.++++++++|+.+++... .+.||+|++||||... ...+++......++...
T Consensus 75 ~~~~~~~~~~~~~~d~~~~~~~~------~~~fD~i~~~~~~~~~~~~~~~~~l~~~~~L~~gG~l~~~~~~~~~~~~~~ 148 (177)
T 2esr_A 75 IMTKAENRFTLLKMEAERAIDCL------TGRFDLVFLDPPYAKETIVATIEALAAKNLLSEQVMVVCETDKTVLLPKEI 148 (177)
T ss_dssp HTTTCGGGEEEECSCHHHHHHHB------CSCEEEEEECCSSHHHHHHHHHHHHHHTTCEEEEEEEEEEEETTCCCCSEE
T ss_pred HHcCCCCceEEEECcHHHhHHhh------cCCCCEEEECCCCCcchHHHHHHHHHhCCCcCCCcEEEEEECCcccccccc
Confidence 99988767999999998876432 3579999999998421 11236776666666656
Q ss_pred CCeEEEEEeeecceEEEEeecch
Q 022298 262 GCLVKIKDRRFGRTHLAIYGPDW 284 (299)
Q Consensus 262 ~~l~~~~~r~YG~t~l~~y~~~~ 284 (299)
.+|...++|+||.+.+.||.+.-
T Consensus 149 ~~~~~~~~~~yg~~~~~~~~~~~ 171 (177)
T 2esr_A 149 ATLGIWKEKIYGISKVTVYVNEG 171 (177)
T ss_dssp TTEEEEEEEEETTEEEEEEEETT
T ss_pred CceEEEEeeecCcEEEEEEEecc
Confidence 78999999999999999998654
No 7
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.61 E-value=8.2e-15 Score=135.29 Aligned_cols=120 Identities=18% Similarity=0.243 Sum_probs=98.8
Q ss_pred ceEEEEee--eeCCeEEecCCCC-CCCCCHHHHHHHHHHHHHhcCCCCCCCCCCEEEEECCccchHHHHHHHcCCCEEEE
Q 022298 107 RLLQVLGG--KARRKKLLSPKGM-DVRPMMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGCSEVHF 183 (299)
Q Consensus 107 ~~mrIi~G--k~~Gr~L~~p~~~-~~RPttd~Vrealfn~L~~~~~~~~~~~~~~VLDLfaGSGalgIEAlSrGa~~V~~ 183 (299)
..+.++.| .|.|..+.+..+. .+||.++.+.+.+++.+... .+.+|||+|||+|.+++.++..+..+|++
T Consensus 79 ~p~~yi~g~~~f~~~~~~v~~~~lipr~~te~lv~~~l~~~~~~-------~~~~vLDlG~GsG~~~~~la~~~~~~v~~ 151 (284)
T 1nv8_A 79 YPLHYILGEKEFMGLSFLVEEGVFVPRPETEELVELALELIRKY-------GIKTVADIGTGSGAIGVSVAKFSDAIVFA 151 (284)
T ss_dssp CCHHHHHTEEEETTEEEECCTTSCCCCTTHHHHHHHHHHHHHHH-------TCCEEEEESCTTSHHHHHHHHHSSCEEEE
T ss_pred CCCeEEeeeeEECCeEEEeCCCceecChhHHHHHHHHHHHhccc-------CCCEEEEEeCchhHHHHHHHHCCCCEEEE
Confidence 34444455 4779998876554 58999999999998887642 36799999999999999988774457999
Q ss_pred EeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCe---eEEEEcCCCCC
Q 022298 184 VEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPF---DYMSVTPPYTA 243 (299)
Q Consensus 184 VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~f---DlI~iDPPY~~ 243 (299)
+|+|+.++ +.+++|++.+++.++++++++|+.+.+. ++| |+|++||||..
T Consensus 152 vDis~~al-~~A~~n~~~~~l~~~v~~~~~D~~~~~~---------~~f~~~D~IvsnPPyi~ 204 (284)
T 1nv8_A 152 TDVSSKAV-EIARKNAERHGVSDRFFVRKGEFLEPFK---------EKFASIEMILSNPPYVK 204 (284)
T ss_dssp EESCHHHH-HHHHHHHHHTTCTTSEEEEESSTTGGGG---------GGTTTCCEEEECCCCBC
T ss_pred EECCHHHH-HHHHHHHHHcCCCCceEEEECcchhhcc---------cccCCCCEEEEcCCCCC
Confidence 99999998 9999999999998789999999987541 367 99999999985
No 8
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=99.59 E-value=1.1e-14 Score=140.11 Aligned_cols=110 Identities=21% Similarity=0.261 Sum_probs=91.7
Q ss_pred eEEecCC-------CCCCCCCHHHHHHHHHHHHHhcCCCCCCCCCCEEEEECCccchHHHHHHHc-CCCEEEEEeCCHHH
Q 022298 119 KKLLSPK-------GMDVRPMMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISR-GCSEVHFVEMDPWV 190 (299)
Q Consensus 119 r~L~~p~-------~~~~RPttd~Vrealfn~L~~~~~~~~~~~~~~VLDLfaGSGalgIEAlSr-Ga~~V~~VD~n~~A 190 (299)
-++.+|. +.+.+|+++..|...+..+.. ..+.+|||+|||||.++++++++ |+.+|+++|+|+.+
T Consensus 11 ~~~~~p~~~~~~~~~~F~np~~~~nr~l~~~~l~~-------~~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~a 83 (378)
T 2dul_A 11 AKILIPKAESIYDSPVFYNPRMALNRDIVVVLLNI-------LNPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDA 83 (378)
T ss_dssp EEEEEC--------CCCCCGGGHHHHHHHHHHHHH-------HCCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHH
T ss_pred EEEEecCccccCCCCceeCCchHHHHHHHHHHHHH-------cCCCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHH
Confidence 4555654 456899999988887777765 25789999999999999999987 77789999999999
Q ss_pred HHHHHHHHHHHh---------------CCCCcEEEEEcchhhHHHHHhhhcCCCCCeeEEEEcCCCCC
Q 022298 191 VSNVLIPNLEWT---------------GFLDVSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTA 243 (299)
Q Consensus 191 l~~~a~~N~~~~---------------g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fDlI~iDPPY~~ 243 (299)
+ +.+++|++.+ ++.+ ++++++|+.+++... .+.||+|++|||+..
T Consensus 84 v-~~a~~N~~~n~~~~~~~~~~~~~~~gl~~-i~v~~~Da~~~~~~~------~~~fD~I~lDP~~~~ 143 (378)
T 2dul_A 84 Y-ELMKRNVMLNFDGELRESKGRAILKGEKT-IVINHDDANRLMAER------HRYFHFIDLDPFGSP 143 (378)
T ss_dssp H-HHHHHHHHHHCCSCCEECSSEEEEESSSE-EEEEESCHHHHHHHS------TTCEEEEEECCSSCC
T ss_pred H-HHHHHHHHHhcccccccccccccccCCCc-eEEEcCcHHHHHHhc------cCCCCEEEeCCCCCH
Confidence 8 9999999999 8765 899999999887542 357999999998763
No 9
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.58 E-value=6.6e-15 Score=136.44 Aligned_cols=80 Identities=18% Similarity=0.246 Sum_probs=73.9
Q ss_pred CCCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCeeE
Q 022298 155 RPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDY 234 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fDl 234 (299)
++.+|||+|||+|.+++.|+++|+.+|+++|+|+.|+ +.+++|++.|++.++++++++|+.++. ..+.||.
T Consensus 125 ~g~~VlD~~aG~G~~~i~~a~~g~~~V~avD~np~a~-~~~~~N~~~N~v~~~v~~~~~D~~~~~--------~~~~~D~ 195 (278)
T 3k6r_A 125 PDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTF-KFLVENIHLNKVEDRMSAYNMDNRDFP--------GENIADR 195 (278)
T ss_dssp TTCEEEETTCTTTTTTHHHHHHTCCEEEEECCCHHHH-HHHHHHHHHTTCTTTEEEECSCTTTCC--------CCSCEEE
T ss_pred CCCEEEEecCcCcHHHHHHHHhcCCeEEEEECCHHHH-HHHHHHHHHcCCCCcEEEEeCcHHHhc--------cccCCCE
Confidence 5889999999999999999999988999999999998 999999999999999999999998864 2468999
Q ss_pred EEEcCCCCC
Q 022298 235 MSVTPPYTA 243 (299)
Q Consensus 235 I~iDPPY~~ 243 (299)
|++|||+..
T Consensus 196 Vi~~~p~~~ 204 (278)
T 3k6r_A 196 ILMGYVVRT 204 (278)
T ss_dssp EEECCCSSG
T ss_pred EEECCCCcH
Confidence 999999875
No 10
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.57 E-value=2e-14 Score=138.14 Aligned_cols=84 Identities=15% Similarity=0.194 Sum_probs=74.1
Q ss_pred CCCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCC-cEEEEEcchhhHHHHHhhhcCCCCCee
Q 022298 155 RPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLD-VSSIHTVRVETFLERAEQFVGKDGPFD 233 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~-~~~vi~~D~~~~l~~~~~~~~~~~~fD 233 (299)
.+.+|||+|||||.++++++++|+.+|++||+|+.++ +.+++|++.+++.+ +++++++|+.+++.... ..+.+||
T Consensus 212 ~~~~VLDl~cGtG~~sl~la~~ga~~V~~vD~s~~al-~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~---~~~~~fD 287 (385)
T 2b78_A 212 AGKTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSR-ALSLAHFEANHLDMANHQLVVMDVFDYFKYAR---RHHLTYD 287 (385)
T ss_dssp BTCEEEEETCTTTHHHHHHHHTTBSEEEEEESCTTHH-HHHHHHHHHTTCCCTTEEEEESCHHHHHHHHH---HTTCCEE
T ss_pred CCCeEEEEeeccCHHHHHHHHCCCCEEEEEECCHHHH-HHHHHHHHHcCCCccceEEEECCHHHHHHHHH---HhCCCcc
Confidence 4789999999999999999998988999999999998 99999999999875 69999999999876431 1235899
Q ss_pred EEEEcCCCC
Q 022298 234 YMSVTPPYT 242 (299)
Q Consensus 234 lI~iDPPY~ 242 (299)
+|++||||.
T Consensus 288 ~Ii~DPP~~ 296 (385)
T 2b78_A 288 IIIIDPPSF 296 (385)
T ss_dssp EEEECCCCC
T ss_pred EEEECCCCC
Confidence 999999995
No 11
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=99.56 E-value=1e-14 Score=141.07 Aligned_cols=106 Identities=19% Similarity=0.220 Sum_probs=81.5
Q ss_pred CCCCCHHHHHHHHHHHHHhcCCCCCCCCCCEEEEECCccchHHHHHHHc--CCCEEEEEeCCHHHHHHHHHHHHHHhCCC
Q 022298 128 DVRPMMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISR--GCSEVHFVEMDPWVVSNVLIPNLEWTGFL 205 (299)
Q Consensus 128 ~~RPttd~Vrealfn~L~~~~~~~~~~~~~~VLDLfaGSGalgIEAlSr--Ga~~V~~VD~n~~Al~~~a~~N~~~~g~~ 205 (299)
+++|....-|..+...+..... ...++.+|||+|||||++|++++++ ||.+|++||+|+.++ +.+++|++.|++.
T Consensus 27 Ffn~~~~~nR~l~~~~~~~~~~--~~~~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av-~~~~~N~~~Ngl~ 103 (392)
T 3axs_A 27 FYNPRMRVNRDLAVLGLEYLCK--KLGRPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAI-EIMKENFKLNNIP 103 (392)
T ss_dssp SCCGGGHHHHHHHHHHHHHHHH--HHCSCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHH-HHHHHHHHHTTCC
T ss_pred EEcCCcHHHHHHHHHHHHHHhh--ccCCCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHH-HHHHHHHHHhCCC
Confidence 4577776655544333221100 0013689999999999999999984 778999999999998 9999999999998
Q ss_pred Cc-EEEEEcchhhHHH-HHhhhcCCCCCeeEEEEcCCCCC
Q 022298 206 DV-SSIHTVRVETFLE-RAEQFVGKDGPFDYMSVTPPYTA 243 (299)
Q Consensus 206 ~~-~~vi~~D~~~~l~-~~~~~~~~~~~fDlI~iDPPY~~ 243 (299)
++ ++++++|+.+++. .. .++||+|++|| |..
T Consensus 104 ~~~v~v~~~Da~~~l~~~~------~~~fD~V~lDP-~g~ 136 (392)
T 3axs_A 104 EDRYEIHGMEANFFLRKEW------GFGFDYVDLDP-FGT 136 (392)
T ss_dssp GGGEEEECSCHHHHHHSCC------SSCEEEEEECC-SSC
T ss_pred CceEEEEeCCHHHHHHHhh------CCCCcEEEECC-CcC
Confidence 77 9999999999875 32 35799999999 543
No 12
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=99.56 E-value=1.2e-15 Score=141.63 Aligned_cols=91 Identities=12% Similarity=0.178 Sum_probs=76.8
Q ss_pred HHHHHHHHhcCCCCCCCCCCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhh
Q 022298 138 GAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVET 217 (299)
Q Consensus 138 ealfn~L~~~~~~~~~~~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~ 217 (299)
..+||++.. +.+..+||+|+|||++|+||+|++ +++++||+++.++ +.+++|++. .+++++++.|+..
T Consensus 81 ~~yf~~l~~-------~n~~~~LDlfaGSGaLgiEaLS~~-d~~vfvE~~~~a~-~~L~~Nl~~---~~~~~V~~~D~~~ 148 (283)
T 2oo3_A 81 LEYISVIKQ-------INLNSTLSYYPGSPYFAINQLRSQ-DRLYLCELHPTEY-NFLLKLPHF---NKKVYVNHTDGVS 148 (283)
T ss_dssp HHHHHHHHH-------HSSSSSCCEEECHHHHHHHHSCTT-SEEEEECCSHHHH-HHHTTSCCT---TSCEEEECSCHHH
T ss_pred HHHHHHHHH-------hcCCCceeEeCCcHHHHHHHcCCC-CeEEEEeCCHHHH-HHHHHHhCc---CCcEEEEeCcHHH
Confidence 368888876 346789999999999999999965 8999999999998 999999975 3568999999998
Q ss_pred HHHHHhhhcCCCCCeeEEEEcCCCCC
Q 022298 218 FLERAEQFVGKDGPFDYMSVTPPYTA 243 (299)
Q Consensus 218 ~l~~~~~~~~~~~~fDlI~iDPPY~~ 243 (299)
.+... .....+||+||+||||..
T Consensus 149 ~L~~l---~~~~~~fdLVfiDPPYe~ 171 (283)
T 2oo3_A 149 KLNAL---LPPPEKRGLIFIDPSYER 171 (283)
T ss_dssp HHHHH---CSCTTSCEEEEECCCCCS
T ss_pred HHHHh---cCCCCCccEEEECCCCCC
Confidence 88654 233457999999999994
No 13
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.51 E-value=1.5e-13 Score=129.91 Aligned_cols=102 Identities=23% Similarity=0.261 Sum_probs=83.0
Q ss_pred CCCCHHHHHHHHHHHHHhcCCCCCCCCCCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCC-c
Q 022298 129 VRPMMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLD-V 207 (299)
Q Consensus 129 ~RPttd~Vrealfn~L~~~~~~~~~~~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~-~ 207 (299)
.-|.....++.+.+.+... -.+.+|||+|||+|.++++++.+|+ +|++||+|+.++ +.+++|++.+++.+ +
T Consensus 133 ~f~dq~~~~~~l~~~~~~~------~~~~~VLDlgcGtG~~sl~la~~ga-~V~~VD~s~~al-~~a~~n~~~~gl~~~~ 204 (332)
T 2igt_A 133 VFPEQIVHWEWLKNAVETA------DRPLKVLNLFGYTGVASLVAAAAGA-EVTHVDASKKAI-GWAKENQVLAGLEQAP 204 (332)
T ss_dssp CCGGGHHHHHHHHHHHHHS------SSCCEEEEETCTTCHHHHHHHHTTC-EEEEECSCHHHH-HHHHHHHHHHTCTTSC
T ss_pred echHHHHHHHHHHHHHHhc------CCCCcEEEcccccCHHHHHHHHcCC-EEEEEECCHHHH-HHHHHHHHHcCCCccc
Confidence 3566666666676666421 1467999999999999999999998 899999999998 99999999999876 4
Q ss_pred EEEEEcchhhHHHHHhhhcCCCCCeeEEEEcCCC
Q 022298 208 SSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPY 241 (299)
Q Consensus 208 ~~vi~~D~~~~l~~~~~~~~~~~~fDlI~iDPPY 241 (299)
++++++|+.+++.... ...++||+|++||||
T Consensus 205 v~~i~~D~~~~l~~~~---~~~~~fD~Ii~dPP~ 235 (332)
T 2igt_A 205 IRWICEDAMKFIQREE---RRGSTYDIILTDPPK 235 (332)
T ss_dssp EEEECSCHHHHHHHHH---HHTCCBSEEEECCCS
T ss_pred eEEEECcHHHHHHHHH---hcCCCceEEEECCcc
Confidence 8999999999875421 013689999999996
No 14
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.50 E-value=5.3e-14 Score=126.88 Aligned_cols=111 Identities=17% Similarity=0.235 Sum_probs=85.3
Q ss_pred CeEEecCCCCCCCCCHHHHHHHHHHHHHhcCCCCCCC-CCCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHH
Q 022298 118 RKKLLSPKGMDVRPMMEVVKGAAFDILQSAGGCPASL-RPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLI 196 (299)
Q Consensus 118 Gr~L~~p~~~~~RPttd~Vrealfn~L~~~~~~~~~~-~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~ 196 (299)
+.++..+.+ ..|+.+|.+.-+- ++.. . .+.+|||+|||+|.+++.++.++..+|++||+++.++ +.++
T Consensus 21 ~~~i~q~~~-~~~~~~d~~ll~~--~~~~-------~~~~~~vLDlG~G~G~~~~~la~~~~~~v~gvDi~~~~~-~~a~ 89 (259)
T 3lpm_A 21 NLRIIQSPS-VFSFSIDAVLLAK--FSYL-------PIRKGKIIDLCSGNGIIPLLLSTRTKAKIVGVEIQERLA-DMAK 89 (259)
T ss_dssp TEEEEEBTT-TBCCCHHHHHHHH--HCCC-------CSSCCEEEETTCTTTHHHHHHHTTCCCEEEEECCSHHHH-HHHH
T ss_pred CEEEEeCCC-CccCcHHHHHHHH--HhcC-------CCCCCEEEEcCCchhHHHHHHHHhcCCcEEEEECCHHHH-HHHH
Confidence 455555554 4688888543222 2211 2 4789999999999999998888776899999999998 9999
Q ss_pred HHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCeeEEEEcCCCCCC
Q 022298 197 PNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTAV 244 (299)
Q Consensus 197 ~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fDlI~iDPPY~~~ 244 (299)
+|++.+++.++++++++|+.++.... ..++||+|++||||...
T Consensus 90 ~n~~~~~~~~~v~~~~~D~~~~~~~~-----~~~~fD~Ii~npPy~~~ 132 (259)
T 3lpm_A 90 RSVAYNQLEDQIEIIEYDLKKITDLI-----PKERADIVTCNPPYFAT 132 (259)
T ss_dssp HHHHHTTCTTTEEEECSCGGGGGGTS-----CTTCEEEEEECCCC---
T ss_pred HHHHHCCCcccEEEEECcHHHhhhhh-----ccCCccEEEECCCCCCC
Confidence 99999999888999999998875311 24789999999999643
No 15
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=99.48 E-value=3.9e-13 Score=128.17 Aligned_cols=114 Identities=17% Similarity=0.165 Sum_probs=83.4
Q ss_pred eEEecCCCCCCCCCHHHHHHHHHHHHHhcCCCCCCCCCCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHH
Q 022298 119 KKLLSPKGMDVRPMMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPN 198 (299)
Q Consensus 119 r~L~~p~~~~~RPttd~Vrealfn~L~~~~~~~~~~~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N 198 (299)
..+.++++.+..+.+. ..+.+++++....+ ..+.+|||+|||+|.+++.+ ++++.+|++||+|+.++ +.+++|
T Consensus 182 ~~~~~~~~~F~Q~n~~-~~~~l~~~~~~~~~----~~~~~vLDl~cG~G~~~l~l-a~~~~~V~gvd~~~~ai-~~a~~n 254 (369)
T 3bt7_A 182 MIYRQVENSFTQPNAA-MNIQMLEWALDVTK----GSKGDLLELYCGNGNFSLAL-ARNFDRVLATEIAKPSV-AAAQYN 254 (369)
T ss_dssp CEEEEETTSCCCSBHH-HHHHHHHHHHHHTT----TCCSEEEEESCTTSHHHHHH-GGGSSEEEEECCCHHHH-HHHHHH
T ss_pred EEEEECCCCeecCCHH-HHHHHHHHHHHHhh----cCCCEEEEccCCCCHHHHHH-HhcCCEEEEEECCHHHH-HHHHHH
Confidence 4455555555555554 34455555433211 23678999999999999955 45667899999999998 999999
Q ss_pred HHHhCCCCcEEEEEcchhhHHHHHhhhcCCC------------CCeeEEEEcCCCCC
Q 022298 199 LEWTGFLDVSSIHTVRVETFLERAEQFVGKD------------GPFDYMSVTPPYTA 243 (299)
Q Consensus 199 ~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~------------~~fDlI~iDPPY~~ 243 (299)
++.+++. +++++++|+.+++.... ... ..||+|++||||..
T Consensus 255 ~~~ng~~-~v~~~~~d~~~~~~~~~---~~~~~~~l~~~~~~~~~fD~Vv~dPPr~g 307 (369)
T 3bt7_A 255 IAANHID-NVQIIRMAAEEFTQAMN---GVREFNRLQGIDLKSYQCETIFVDPPRSG 307 (369)
T ss_dssp HHHTTCC-SEEEECCCSHHHHHHHS---SCCCCTTGGGSCGGGCCEEEEEECCCTTC
T ss_pred HHHcCCC-ceEEEECCHHHHHHHHh---hccccccccccccccCCCCEEEECcCccc
Confidence 9999985 58999999998875431 110 37999999999974
No 16
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.47 E-value=5.7e-13 Score=121.14 Aligned_cols=117 Identities=24% Similarity=0.249 Sum_probs=94.4
Q ss_pred EEEee--eeCCeEEecCCCC-CCCCCHHHHHHHHHHHHHhcCCCCCCCCCCEEEEECCccchHHHHHHHc-CCCEEEEEe
Q 022298 110 QVLGG--KARRKKLLSPKGM-DVRPMMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISR-GCSEVHFVE 185 (299)
Q Consensus 110 rIi~G--k~~Gr~L~~p~~~-~~RPttd~Vrealfn~L~~~~~~~~~~~~~~VLDLfaGSGalgIEAlSr-Ga~~V~~VD 185 (299)
.++.| .+.|+.+.+..+. .+||.++.+.+.+.+.+.. .+.+|||+|||+|.+++.++.. +..+|+++|
T Consensus 69 ~~i~g~~~f~~~~~~~~~~~~ipr~~te~l~~~~l~~~~~--------~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD 140 (276)
T 2b3t_A 69 AHLTGVREFWSLPLFVSPATLIPRPDTECLVEQALARLPE--------QPCRILDLGTGTGAIALALASERPDCEIIAVD 140 (276)
T ss_dssp HHHSCEEEETTEEEECCTTSCCCCTTHHHHHHHHHHHSCS--------SCCEEEEETCTTSHHHHHHHHHCTTSEEEEEC
T ss_pred hHeeeeeEECCceEEeCCCCcccCchHHHHHHHHHHhccc--------CCCEEEEecCCccHHHHHHHHhCCCCEEEEEE
Confidence 34455 4678888866554 5799999998888777631 4679999999999999988754 455899999
Q ss_pred CCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCeeEEEEcCCCCCC
Q 022298 186 MDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTAV 244 (299)
Q Consensus 186 ~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fDlI~iDPPY~~~ 244 (299)
+|+.++ +.+++|++.+++. +++++++|+.+.+. .++||+|++||||...
T Consensus 141 ~s~~~l-~~a~~n~~~~~~~-~v~~~~~d~~~~~~--------~~~fD~Iv~npPy~~~ 189 (276)
T 2b3t_A 141 RMPDAV-SLAQRNAQHLAIK-NIHILQSDWFSALA--------GQQFAMIVSNPPYIDE 189 (276)
T ss_dssp SSHHHH-HHHHHHHHHHTCC-SEEEECCSTTGGGT--------TCCEEEEEECCCCBCT
T ss_pred CCHHHH-HHHHHHHHHcCCC-ceEEEEcchhhhcc--------cCCccEEEECCCCCCc
Confidence 999998 9999999999886 58999999877531 3689999999999753
No 17
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.47 E-value=1.6e-13 Score=131.80 Aligned_cols=85 Identities=24% Similarity=0.354 Sum_probs=74.1
Q ss_pred CCCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCC-CCcEEEEEcchhhHHHHHhhhcCCCCCee
Q 022298 155 RPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGF-LDVSSIHTVRVETFLERAEQFVGKDGPFD 233 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~-~~~~~vi~~D~~~~l~~~~~~~~~~~~fD 233 (299)
.+.+|||+|||+|.+++.++.+|+.+|++||+|+.++ +.+++|++.+++ .++++++++|+.+++.... ....+||
T Consensus 220 ~~~~VLDl~cG~G~~sl~la~~g~~~V~~vD~s~~al-~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~---~~~~~fD 295 (396)
T 3c0k_A 220 ENKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEAL-DIARQNVELNKLDLSKAEFVRDDVFKLLRTYR---DRGEKFD 295 (396)
T ss_dssp TTCEEEEESCTTCSHHHHHHHTTCSEEEEEESCHHHH-HHHHHHHHHTTCCGGGEEEEESCHHHHHHHHH---HTTCCEE
T ss_pred CCCeEEEeeccCCHHHHHHHHCCCCEEEEEECCHHHH-HHHHHHHHHcCCCccceEEEECCHHHHHHHHH---hcCCCCC
Confidence 4789999999999999999999888999999999998 999999999998 6569999999999875431 1236899
Q ss_pred EEEEcCCCCC
Q 022298 234 YMSVTPPYTA 243 (299)
Q Consensus 234 lI~iDPPY~~ 243 (299)
+|++||||..
T Consensus 296 ~Ii~dpP~~~ 305 (396)
T 3c0k_A 296 VIVMDPPKFV 305 (396)
T ss_dssp EEEECCSSTT
T ss_pred EEEECCCCCC
Confidence 9999999953
No 18
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=99.47 E-value=1.2e-13 Score=133.21 Aligned_cols=99 Identities=21% Similarity=0.319 Sum_probs=80.2
Q ss_pred CCCHHHHHHHHHHHHHhcCCCCCCCCCCEEEEECCccchHHHHHHHcCCC------------------------------
Q 022298 130 RPMMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGCS------------------------------ 179 (299)
Q Consensus 130 RPttd~Vrealfn~L~~~~~~~~~~~~~~VLDLfaGSGalgIEAlSrGa~------------------------------ 179 (299)
-|..+.+..++...... ..+..+||+|||||++.|||+.+++.
T Consensus 176 Apl~e~LAaall~l~~~-------~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~ 248 (384)
T 3ldg_A 176 APIKENMAAAIILLSNW-------FPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEAD 248 (384)
T ss_dssp CCCCHHHHHHHHHHTTC-------CTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHhCC-------CCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHH
Confidence 34556666666554432 24679999999999999999976543
Q ss_pred ---------EEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCeeEEEEcCCCCCC
Q 022298 180 ---------EVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTAV 244 (299)
Q Consensus 180 ---------~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fDlI~iDPPY~~~ 244 (299)
+|+++|+|+.++ +.+++|++.+|+.+.++++++|+.++. ....||+|++||||+..
T Consensus 249 ~~~~~~~~~~v~GvDid~~al-~~Ar~Na~~~gl~~~I~~~~~D~~~l~--------~~~~fD~Iv~NPPYG~r 313 (384)
T 3ldg_A 249 EQADYDIQLDISGFDFDGRMV-EIARKNAREVGLEDVVKLKQMRLQDFK--------TNKINGVLISNPPYGER 313 (384)
T ss_dssp HHCCTTCCCCEEEEESCHHHH-HHHHHHHHHTTCTTTEEEEECCGGGCC--------CCCCSCEEEECCCCTTT
T ss_pred HhhhccCCceEEEEECCHHHH-HHHHHHHHHcCCCCceEEEECChHHCC--------ccCCcCEEEECCchhhc
Confidence 499999999998 999999999999888999999998753 13589999999999863
No 19
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.47 E-value=1.9e-13 Score=140.91 Aligned_cols=82 Identities=23% Similarity=0.336 Sum_probs=74.5
Q ss_pred CCCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCC-CcEEEEEcchhhHHHHHhhhcCCCCCee
Q 022298 155 RPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFL-DVSSIHTVRVETFLERAEQFVGKDGPFD 233 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~-~~~~vi~~D~~~~l~~~~~~~~~~~~fD 233 (299)
.+.+|||+|||||.+++.|+..|+.+|++||+|+.++ +.+++|++.+++. ++++++++|+.+++... .++||
T Consensus 539 ~g~~VLDlg~GtG~~sl~aa~~ga~~V~aVD~s~~al-~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~~------~~~fD 611 (703)
T 3v97_A 539 KGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYL-EWAERNLRLNGLTGRAHRLIQADCLAWLREA------NEQFD 611 (703)
T ss_dssp TTCEEEEESCTTCHHHHHHHHTTCSEEEEEESCHHHH-HHHHHHHHHTTCCSTTEEEEESCHHHHHHHC------CCCEE
T ss_pred CCCcEEEeeechhHHHHHHHHCCCCEEEEEeCCHHHH-HHHHHHHHHcCCCccceEEEecCHHHHHHhc------CCCcc
Confidence 5789999999999999999999998999999999998 9999999999987 57999999999987642 47899
Q ss_pred EEEEcCCCCC
Q 022298 234 YMSVTPPYTA 243 (299)
Q Consensus 234 lI~iDPPY~~ 243 (299)
+|++||||..
T Consensus 612 ~Ii~DPP~f~ 621 (703)
T 3v97_A 612 LIFIDPPTFS 621 (703)
T ss_dssp EEEECCCSBC
T ss_pred EEEECCcccc
Confidence 9999999853
No 20
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.46 E-value=4.5e-13 Score=115.63 Aligned_cols=98 Identities=26% Similarity=0.252 Sum_probs=80.3
Q ss_pred CCCHHHHHHHHHHHHHhcCCCCCCCCCCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEE
Q 022298 130 RPMMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSS 209 (299)
Q Consensus 130 RPttd~Vrealfn~L~~~~~~~~~~~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~ 209 (299)
.++...+.+.+...+.... ...+.+|||+|||+|.+++.++.+|+.+|+++|+|+.++ +.+++|++.+++ +++
T Consensus 28 ~~~~~~~~~~l~~~~~~~~----~~~~~~vlD~g~G~G~~~~~l~~~~~~~v~~vD~~~~~~-~~a~~~~~~~~~--~~~ 100 (207)
T 1wy7_A 28 YRTPGNAASELLWLAYSLG----DIEGKVVADLGAGTGVLSYGALLLGAKEVICVEVDKEAV-DVLIENLGEFKG--KFK 100 (207)
T ss_dssp CCCCHHHHHHHHHHHHHTT----SSTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHH-HHHHHHTGGGTT--SEE
T ss_pred ecCchHHHHHHHHHHHHcC----CCCcCEEEEeeCCCCHHHHHHHHcCCCEEEEEECCHHHH-HHHHHHHHHcCC--CEE
Confidence 4566667777766654321 135789999999999999999888887899999999998 999999998887 489
Q ss_pred EEEcchhhHHHHHhhhcCCCCCeeEEEEcCCCCCC
Q 022298 210 IHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTAV 244 (299)
Q Consensus 210 vi~~D~~~~l~~~~~~~~~~~~fDlI~iDPPY~~~ 244 (299)
++++|+.++ ...||+|++||||...
T Consensus 101 ~~~~d~~~~----------~~~~D~v~~~~p~~~~ 125 (207)
T 1wy7_A 101 VFIGDVSEF----------NSRVDIVIMNPPFGSQ 125 (207)
T ss_dssp EEESCGGGC----------CCCCSEEEECCCCSSS
T ss_pred EEECchHHc----------CCCCCEEEEcCCCccc
Confidence 999998864 2489999999999753
No 21
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.46 E-value=1e-12 Score=110.66 Aligned_cols=120 Identities=14% Similarity=0.177 Sum_probs=96.4
Q ss_pred ceEEEEeeeeCCeEEec--CCCCCCCCCHHHHHHHHHHHHHhcCCCCCCCCCCEEEEECCccchHHHHHHHcCCCEEEEE
Q 022298 107 RLLQVLGGKARRKKLLS--PKGMDVRPMMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGCSEVHFV 184 (299)
Q Consensus 107 ~~mrIi~Gk~~Gr~L~~--p~~~~~RPttd~Vrealfn~L~~~~~~~~~~~~~~VLDLfaGSGalgIEAlSrGa~~V~~V 184 (299)
..++.+.+.+.|+.+.. +.+...+++.+...+.+++.+.. ..+.+|||+|||+|.+++.++.++ .+|+++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-------~~~~~vLdiG~G~G~~~~~~~~~~-~~v~~~ 80 (194)
T 1dus_A 9 SDVKIVEDILRGKKLKFKTDSGVFSYGKVDKGTKILVENVVV-------DKDDDILDLGCGYGVIGIALADEV-KSTTMA 80 (194)
T ss_dssp CCEEEEEEEETTEEEEEEEETTSTTTTSCCHHHHHHHHHCCC-------CTTCEEEEETCTTSHHHHHHGGGS-SEEEEE
T ss_pred ccccEEeeecCCCceEEEeCCCcCCccccchHHHHHHHHccc-------CCCCeEEEeCCCCCHHHHHHHHcC-CeEEEE
Confidence 45788899999988765 34444455566677777777643 257899999999999999888884 579999
Q ss_pred eCCHHHHHHHHHHHHHHhCCCC-cEEEEEcchhhHHHHHhhhcCCCCCeeEEEEcCCCCC
Q 022298 185 EMDPWVVSNVLIPNLEWTGFLD-VSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTA 243 (299)
Q Consensus 185 D~n~~Al~~~a~~N~~~~g~~~-~~~vi~~D~~~~l~~~~~~~~~~~~fDlI~iDPPY~~ 243 (299)
|+++.++ +.+++|++.+++.+ +++++++|+.+.+. .+.||+|++||||..
T Consensus 81 D~~~~~~-~~a~~~~~~~~~~~~~~~~~~~d~~~~~~--------~~~~D~v~~~~~~~~ 131 (194)
T 1dus_A 81 DINRRAI-KLAKENIKLNNLDNYDIRVVHSDLYENVK--------DRKYNKIITNPPIRA 131 (194)
T ss_dssp ESCHHHH-HHHHHHHHHTTCTTSCEEEEECSTTTTCT--------TSCEEEEEECCCSTT
T ss_pred ECCHHHH-HHHHHHHHHcCCCccceEEEECchhcccc--------cCCceEEEECCCccc
Confidence 9999998 99999999988765 58999999876531 368999999999875
No 22
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.46 E-value=3.4e-13 Score=119.26 Aligned_cols=98 Identities=16% Similarity=0.168 Sum_probs=83.5
Q ss_pred CCCHHHHHHHHHHHHHhcCCCCCCCCCCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEE
Q 022298 130 RPMMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSS 209 (299)
Q Consensus 130 RPttd~Vrealfn~L~~~~~~~~~~~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~ 209 (299)
+++.+.+.+.++..+... ..+.+|||+|||+|.+++.++.+| .+|+++|+|+.++ +.+++|++.+++.++++
T Consensus 59 ~~~~~~~~~~l~~~~~~~------~~~~~vLD~gcG~G~~~~~la~~~-~~v~~vD~s~~~~-~~a~~~~~~~~~~~~~~ 130 (241)
T 3gdh_A 59 SVTPEKIAEHIAGRVSQS------FKCDVVVDAFCGVGGNTIQFALTG-MRVIAIDIDPVKI-ALARNNAEVYGIADKIE 130 (241)
T ss_dssp HCCCHHHHHHHHHHHHHH------SCCSEEEETTCTTSHHHHHHHHTT-CEEEEEESCHHHH-HHHHHHHHHTTCGGGEE
T ss_pred ecCHHHHHHHHHHHhhhc------cCCCEEEECccccCHHHHHHHHcC-CEEEEEECCHHHH-HHHHHHHHHcCCCcCeE
Confidence 456677777777777653 357899999999999999999988 5799999999998 99999999999866799
Q ss_pred EEEcchhhHHHHHhhhcCCCCCeeEEEEcCCCCC
Q 022298 210 IHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTA 243 (299)
Q Consensus 210 vi~~D~~~~l~~~~~~~~~~~~fDlI~iDPPY~~ 243 (299)
++++|+.++.. .+.||+|++||||..
T Consensus 131 ~~~~d~~~~~~--------~~~~D~v~~~~~~~~ 156 (241)
T 3gdh_A 131 FICGDFLLLAS--------FLKADVVFLSPPWGG 156 (241)
T ss_dssp EEESCHHHHGG--------GCCCSEEEECCCCSS
T ss_pred EEECChHHhcc--------cCCCCEEEECCCcCC
Confidence 99999988651 368999999999985
No 23
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.45 E-value=1e-13 Score=123.92 Aligned_cols=123 Identities=14% Similarity=0.021 Sum_probs=85.5
Q ss_pred eeeeCCeEEecCCCCC-CC----CCHHHHHHHHHHHHHhcCCCCCCCCCCEEEEECCccchHHHHHHHcC-CCEEEEEeC
Q 022298 113 GGKARRKKLLSPKGMD-VR----PMMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRG-CSEVHFVEM 186 (299)
Q Consensus 113 ~Gk~~Gr~L~~p~~~~-~R----Pttd~Vrealfn~L~~~~~~~~~~~~~~VLDLfaGSGalgIEAlSrG-a~~V~~VD~ 186 (299)
...+.|+.+.++.+.. .+ |.++.+.+.+++.+... ...+.+|||+|||+|.++++++++. ..+|+++|+
T Consensus 23 ~~~~~~~~~~~~~~~~~p~~~~r~~~~~~~~~~~~~~~~~-----~~~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~ 97 (254)
T 2h00_A 23 LREDFGLSIDIPLERLIPTVPLRLNYIHWVEDLIGHQDSD-----KSTLRRGIDIGTGASCIYPLLGATLNGWYFLATEV 97 (254)
T ss_dssp HHHHHCCCCCCCTTSCCCCHHHHHHHHHHHHHHHCCCCGG-----GCCCCEEEEESCTTTTHHHHHHHHHHCCEEEEEES
T ss_pred HHHcCCeeeecCccccCCCccchHHHHHHHHHHHhhcccc-----CCCCCEEEEeCCChhHHHHHHHHhCCCCeEEEEEC
Confidence 3455677777776643 33 44444444444332210 0146799999999999999888762 357999999
Q ss_pred CHHHHHHHHHHHHHHhCCCCcEEEEEcchhh-HHHHHhhhcCC-CCCeeEEEEcCCCCCC
Q 022298 187 DPWVVSNVLIPNLEWTGFLDVSSIHTVRVET-FLERAEQFVGK-DGPFDYMSVTPPYTAV 244 (299)
Q Consensus 187 n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~-~l~~~~~~~~~-~~~fDlI~iDPPY~~~ 244 (299)
|+.++ +.+++|++.+++.++++++++|+.+ ++... ... .++||+|++||||...
T Consensus 98 s~~~~-~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~---~~~~~~~fD~i~~npp~~~~ 153 (254)
T 2h00_A 98 DDMCF-NYAKKNVEQNNLSDLIKVVKVPQKTLLMDAL---KEESEIIYDFCMCNPPFFAN 153 (254)
T ss_dssp CHHHH-HHHHHHHHHTTCTTTEEEEECCTTCSSTTTS---TTCCSCCBSEEEECCCCC--
T ss_pred CHHHH-HHHHHHHHHcCCCccEEEEEcchhhhhhhhh---hcccCCcccEEEECCCCccC
Confidence 99998 9999999999988779999999765 22111 111 1579999999999753
No 24
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=99.45 E-value=1.7e-13 Score=132.33 Aligned_cols=98 Identities=19% Similarity=0.322 Sum_probs=80.3
Q ss_pred CCCHHHHHHHHHHHHHhcCCCCCCCCCCEEEEECCccchHHHHHHHcCCC------------------------------
Q 022298 130 RPMMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGCS------------------------------ 179 (299)
Q Consensus 130 RPttd~Vrealfn~L~~~~~~~~~~~~~~VLDLfaGSGalgIEAlSrGa~------------------------------ 179 (299)
-|..+.+..++...... ..+..|||+|||||++.|||+.+++.
T Consensus 183 Apl~e~lAa~ll~l~~~-------~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~ 255 (393)
T 3k0b_A 183 APIKETMAAALVLLTSW-------HPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAE 255 (393)
T ss_dssp CSCCHHHHHHHHHHSCC-------CTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHhCC-------CCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHH
Confidence 45666677776654432 24678999999999999999986543
Q ss_pred ---------EEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCeeEEEEcCCCCC
Q 022298 180 ---------EVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTA 243 (299)
Q Consensus 180 ---------~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fDlI~iDPPY~~ 243 (299)
+|+++|+|+.++ +.+++|++.+|+.+.++++++|+.++. ....||+|++||||..
T Consensus 256 ~~~~~~~~~~V~GvDid~~al-~~Ar~Na~~~gl~~~I~~~~~D~~~~~--------~~~~fD~Iv~NPPYg~ 319 (393)
T 3k0b_A 256 DLANYDQPLNIIGGDIDARLI-EIAKQNAVEAGLGDLITFRQLQVADFQ--------TEDEYGVVVANPPYGE 319 (393)
T ss_dssp HHCCTTCCCCEEEEESCHHHH-HHHHHHHHHTTCTTCSEEEECCGGGCC--------CCCCSCEEEECCCCCC
T ss_pred HhhcccCCceEEEEECCHHHH-HHHHHHHHHcCCCCceEEEECChHhCC--------CCCCCCEEEECCCCcc
Confidence 499999999998 999999999999877899999998753 1358999999999975
No 25
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=99.44 E-value=1.7e-13 Score=131.95 Aligned_cols=98 Identities=18% Similarity=0.277 Sum_probs=78.7
Q ss_pred CCCHHHHHHHHHHHHHhcCCCCCCCCCCEEEEECCccchHHHHHHHcCC-------------------------------
Q 022298 130 RPMMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGC------------------------------- 178 (299)
Q Consensus 130 RPttd~Vrealfn~L~~~~~~~~~~~~~~VLDLfaGSGalgIEAlSrGa------------------------------- 178 (299)
-|..+.+..++...... ..+.+|||+|||||++.+||+.+++
T Consensus 177 Apl~e~lAa~ll~~~~~-------~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~ 249 (385)
T 3ldu_A 177 APIRETLAAGLIYLTPW-------KAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAF 249 (385)
T ss_dssp CCCCHHHHHHHHHTSCC-------CTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHhhCC-------CCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHH
Confidence 34455566565444322 2468999999999999999988754
Q ss_pred --------CEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCeeEEEEcCCCCC
Q 022298 179 --------SEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTA 243 (299)
Q Consensus 179 --------~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fDlI~iDPPY~~ 243 (299)
.+|+++|+|+.++ +.+++|++.+|+.+.+++.++|+.++. ....||+|++||||..
T Consensus 250 ~~~~~~~~~~V~GvDid~~ai-~~Ar~Na~~~gl~~~i~~~~~D~~~l~--------~~~~~D~Iv~NPPyg~ 313 (385)
T 3ldu_A 250 NKIDNESKFKIYGYDIDEESI-DIARENAEIAGVDEYIEFNVGDATQFK--------SEDEFGFIITNPPYGE 313 (385)
T ss_dssp HHSCCSCCCCEEEEESCHHHH-HHHHHHHHHHTCGGGEEEEECCGGGCC--------CSCBSCEEEECCCCCC
T ss_pred HHhhccCCceEEEEECCHHHH-HHHHHHHHHcCCCCceEEEECChhhcC--------cCCCCcEEEECCCCcC
Confidence 3599999999998 999999999999877999999998753 1358999999999985
No 26
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.43 E-value=3.8e-13 Score=123.24 Aligned_cols=108 Identities=15% Similarity=0.155 Sum_probs=84.2
Q ss_pred CeEEecCC-CCCCCCCHHHHHHHHHHHHHhcCCCCCCCCCCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHH
Q 022298 118 RKKLLSPK-GMDVRPMMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLI 196 (299)
Q Consensus 118 Gr~L~~p~-~~~~RPttd~Vrealfn~L~~~~~~~~~~~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~ 196 (299)
|.++.+.. .....+.....++.+.+.+. ++.+|||+|||+|.+++.++.+|+.+|+++|+|+.++ +.++
T Consensus 96 g~~f~~d~~~~~f~~~~~~~~~~l~~~~~---------~~~~VLDlgcG~G~~~~~la~~~~~~V~~vD~s~~~~-~~a~ 165 (278)
T 2frn_A 96 GIKYKLDVAKIMFSPANVKERVRMAKVAK---------PDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTF-KFLV 165 (278)
T ss_dssp TEEEEEETTTSCCCGGGHHHHHHHHHHCC---------TTCEEEETTCTTTTTHHHHHHHTCCEEEEECCCHHHH-HHHH
T ss_pred CEEEEEEccceeEcCCcHHHHHHHHHhCC---------CCCEEEEecccCCHHHHHHHHhCCCEEEEEECCHHHH-HHHH
Confidence 44444422 22334444444555544432 4789999999999999999999887899999999998 9999
Q ss_pred HHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCeeEEEEcCCCCC
Q 022298 197 PNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTA 243 (299)
Q Consensus 197 ~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fDlI~iDPPY~~ 243 (299)
+|++.+++.++++++++|+.++.. .++||+|++|||+..
T Consensus 166 ~n~~~n~~~~~v~~~~~D~~~~~~--------~~~fD~Vi~~~p~~~ 204 (278)
T 2frn_A 166 ENIHLNKVEDRMSAYNMDNRDFPG--------ENIADRILMGYVVRT 204 (278)
T ss_dssp HHHHHTTCTTTEEEECSCTTTCCC--------CSCEEEEEECCCSSG
T ss_pred HHHHHcCCCceEEEEECCHHHhcc--------cCCccEEEECCchhH
Confidence 999999998889999999987642 468999999999875
No 27
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.43 E-value=4.4e-13 Score=128.61 Aligned_cols=85 Identities=24% Similarity=0.300 Sum_probs=74.1
Q ss_pred CCCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCeeE
Q 022298 155 RPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDY 234 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fDl 234 (299)
.+.+|||+|||+|.+++.++.+|+.+|++||+|+.++ +.+++|++.+++.++++++++|+.+++.... ....+||+
T Consensus 217 ~~~~VLDl~~G~G~~~~~la~~g~~~v~~vD~s~~~l-~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~---~~~~~fD~ 292 (396)
T 2as0_A 217 PGDRVLDVFTYTGGFAIHAAIAGADEVIGIDKSPRAI-ETAKENAKLNGVEDRMKFIVGSAFEEMEKLQ---KKGEKFDI 292 (396)
T ss_dssp TTCEEEETTCTTTHHHHHHHHTTCSEEEEEESCHHHH-HHHHHHHHHTTCGGGEEEEESCHHHHHHHHH---HTTCCEEE
T ss_pred CCCeEEEecCCCCHHHHHHHHCCCCEEEEEeCCHHHH-HHHHHHHHHcCCCccceEEECCHHHHHHHHH---hhCCCCCE
Confidence 5789999999999999999988888999999999998 9999999999987569999999998875431 12468999
Q ss_pred EEEcCCCCC
Q 022298 235 MSVTPPYTA 243 (299)
Q Consensus 235 I~iDPPY~~ 243 (299)
|++||||..
T Consensus 293 Vi~dpP~~~ 301 (396)
T 2as0_A 293 VVLDPPAFV 301 (396)
T ss_dssp EEECCCCSC
T ss_pred EEECCCCCC
Confidence 999999854
No 28
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=99.42 E-value=9.1e-14 Score=127.44 Aligned_cols=92 Identities=17% Similarity=0.146 Sum_probs=72.9
Q ss_pred HHHHHHHHhcCCCCCCCCC--CEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHhC--------CCCc
Q 022298 138 GAAFDILQSAGGCPASLRP--GRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTG--------FLDV 207 (299)
Q Consensus 138 ealfn~L~~~~~~~~~~~~--~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g--------~~~~ 207 (299)
+.+++.+.. ..+ .+|||+|||+|..+++++++|+ +|++||+++..+ +++++|++..+ +.++
T Consensus 76 e~l~~al~l-------~~g~~~~VLDl~~G~G~dal~lA~~g~-~V~~vE~~~~~~-~l~~~~l~~a~~~~~~~~~l~~~ 146 (258)
T 2oyr_A 76 EAVAKAVGI-------KGDYLPDVVDATAGLGRDAFVLASVGC-RVRMLERNPVVA-ALLDDGLARGYADAEIGGWLQER 146 (258)
T ss_dssp SHHHHHTTC-------BTTBCCCEEETTCTTCHHHHHHHHHTC-CEEEEECCHHHH-HHHHHHHHHHHHCTTTHHHHHHH
T ss_pred HHHHHHhcc-------cCCCCCEEEEcCCcCCHHHHHHHHcCC-EEEEEECCHHHH-HHHHHHHHHHHhhHhhhhhhhcC
Confidence 456666542 135 7999999999999999999998 599999999987 88888876542 3246
Q ss_pred EEEEEcchhhHHHHHhhhcCCCCCeeEEEEcCCCCCC
Q 022298 208 SSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTAV 244 (299)
Q Consensus 208 ~~vi~~D~~~~l~~~~~~~~~~~~fDlI~iDPPY~~~ 244 (299)
++++++|+.+++... .+.||+||+||||...
T Consensus 147 i~~~~~D~~~~L~~~------~~~fDvV~lDP~y~~~ 177 (258)
T 2oyr_A 147 LQLIHASSLTALTDI------TPRPQVVYLDPMFPHK 177 (258)
T ss_dssp EEEEESCHHHHSTTC------SSCCSEEEECCCCCCC
T ss_pred EEEEECCHHHHHHhC------cccCCEEEEcCCCCCc
Confidence 899999999886432 2479999999999764
No 29
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.42 E-value=1.6e-13 Score=117.64 Aligned_cols=105 Identities=21% Similarity=0.253 Sum_probs=68.3
Q ss_pred CCCCCCHHHHHHHHHHHHHhcCCCCCCCCCCEEEEECCccchHHHHHHHcCC-CEEEEEeCCHHHHHHHHHHHHHHhCCC
Q 022298 127 MDVRPMMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGC-SEVHFVEMDPWVVSNVLIPNLEWTGFL 205 (299)
Q Consensus 127 ~~~RPttd~Vrealfn~L~~~~~~~~~~~~~~VLDLfaGSGalgIEAlSrGa-~~V~~VD~n~~Al~~~a~~N~~~~g~~ 205 (299)
..+||.++.+.+.+++.+... ..+.+|||+|||+|.+++.++.++. .+++++|+|+.++ +.+++|++.++.
T Consensus 8 ~~p~~~~~~~~~~~~~~l~~~------~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~-~~a~~~~~~~~~- 79 (215)
T 4dzr_A 8 LIPRPDTEVLVEEAIRFLKRM------PSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDAL-AVARRNAERFGA- 79 (215)
T ss_dssp GSCCHHHHHHHHHHHHHHTTC------CTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC------------------
T ss_pred cCCCccHHHHHHHHHHHhhhc------CCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHH-HHHHHHHHHhCC-
Confidence 346888998999888888641 2578999999999999999988753 3799999999998 999999998877
Q ss_pred CcEEEEEcchhhHHHHHhhhcCCCCCeeEEEEcCCCCC
Q 022298 206 DVSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTA 243 (299)
Q Consensus 206 ~~~~vi~~D~~~~l~~~~~~~~~~~~fDlI~iDPPY~~ 243 (299)
+++++++|+.+.+.... ...++||+|++||||..
T Consensus 80 -~~~~~~~d~~~~~~~~~---~~~~~fD~i~~npp~~~ 113 (215)
T 4dzr_A 80 -VVDWAAADGIEWLIERA---ERGRPWHAIVSNPPYIP 113 (215)
T ss_dssp ----CCHHHHHHHHHHHH---HTTCCBSEEEECCCCCC
T ss_pred -ceEEEEcchHhhhhhhh---hccCcccEEEECCCCCC
Confidence 47888999988654310 11378999999999965
No 30
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.41 E-value=5.4e-13 Score=128.91 Aligned_cols=78 Identities=26% Similarity=0.304 Sum_probs=68.2
Q ss_pred CCCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCeeE
Q 022298 155 RPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDY 234 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fDl 234 (299)
++.+|||+|||||.+++.++.+|+. |++||+|+.++ +.+++|++.+++.+ ++.++|+.+++... .+.||+
T Consensus 214 ~g~~VLDlg~GtG~~sl~~a~~ga~-V~avDis~~al-~~a~~n~~~ng~~~--~~~~~D~~~~l~~~------~~~fD~ 283 (393)
T 4dmg_A 214 PGERVLDVYSYVGGFALRAARKGAY-ALAVDKDLEAL-GVLDQAALRLGLRV--DIRHGEALPTLRGL------EGPFHH 283 (393)
T ss_dssp TTCEEEEESCTTTHHHHHHHHTTCE-EEEEESCHHHH-HHHHHHHHHHTCCC--EEEESCHHHHHHTC------CCCEEE
T ss_pred CCCeEEEcccchhHHHHHHHHcCCe-EEEEECCHHHH-HHHHHHHHHhCCCC--cEEEccHHHHHHHh------cCCCCE
Confidence 3889999999999999999999987 99999999998 99999999999875 46699999887532 234999
Q ss_pred EEEcCCCC
Q 022298 235 MSVTPPYT 242 (299)
Q Consensus 235 I~iDPPY~ 242 (299)
|++||||-
T Consensus 284 Ii~dpP~f 291 (393)
T 4dmg_A 284 VLLDPPTL 291 (393)
T ss_dssp EEECCCCC
T ss_pred EEECCCcC
Confidence 99999983
No 31
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.41 E-value=6.1e-13 Score=127.09 Aligned_cols=98 Identities=20% Similarity=0.167 Sum_probs=81.6
Q ss_pred CCCHHHHHHHHHHHHHhcCCCCCCCCCCEEEEECCccchHHHHHHHcCCC-EEEEEeCCHHHHHHHHHHHHHHhCCCCcE
Q 022298 130 RPMMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGCS-EVHFVEMDPWVVSNVLIPNLEWTGFLDVS 208 (299)
Q Consensus 130 RPttd~Vrealfn~L~~~~~~~~~~~~~~VLDLfaGSGalgIEAlSrGa~-~V~~VD~n~~Al~~~a~~N~~~~g~~~~~ 208 (299)
-|..+.+..++.+.+ . ..+.+|||+|||||.++++++.+|.. +|+++|+|+.++ +.+++|++.+|+.+++
T Consensus 200 a~l~~~la~~l~~~~-~-------~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l-~~A~~n~~~~gl~~~i 270 (373)
T 3tm4_A 200 AHLKASIANAMIELA-E-------LDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHL-IGAEMNALAAGVLDKI 270 (373)
T ss_dssp TCCCHHHHHHHHHHH-T-------CCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHH-HHHHHHHHHTTCGGGC
T ss_pred CCccHHHHHHHHHhh-c-------CCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHH-HHHHHHHHHcCCCCce
Confidence 445666777777666 3 35789999999999999999998763 699999999998 9999999999987779
Q ss_pred EEEEcchhhHHHHHhhhcCCCCCeeEEEEcCCCCC
Q 022298 209 SIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTA 243 (299)
Q Consensus 209 ~vi~~D~~~~l~~~~~~~~~~~~fDlI~iDPPY~~ 243 (299)
+++++|+.++.. ..+.||+|++||||..
T Consensus 271 ~~~~~D~~~~~~-------~~~~fD~Ii~npPyg~ 298 (373)
T 3tm4_A 271 KFIQGDATQLSQ-------YVDSVDFAISNLPYGL 298 (373)
T ss_dssp EEEECCGGGGGG-------TCSCEEEEEEECCCC-
T ss_pred EEEECChhhCCc-------ccCCcCEEEECCCCCc
Confidence 999999987531 2368999999999986
No 32
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.40 E-value=7.6e-13 Score=124.88 Aligned_cols=99 Identities=17% Similarity=0.143 Sum_probs=81.3
Q ss_pred CCCCHHHHHHHHHHHHHhcCCCCCCCCCCEEEEECCccchHHHHHHHcC--CCEEEEEeCCHHHHHHHHHHHHHHhCCCC
Q 022298 129 VRPMMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRG--CSEVHFVEMDPWVVSNVLIPNLEWTGFLD 206 (299)
Q Consensus 129 ~RPttd~Vrealfn~L~~~~~~~~~~~~~~VLDLfaGSGalgIEAlSrG--a~~V~~VD~n~~Al~~~a~~N~~~~g~~~ 206 (299)
..|..+.+..++.+.+.. ..+.+|||+|||||.+.+|++.++ ..+++++|+|+.++ +.+++|++..|+.
T Consensus 184 ~a~l~~~la~~l~~~~~~-------~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i-~~a~~n~~~~g~~- 254 (354)
T 3tma_A 184 RGSLTPVLAQALLRLADA-------RPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRL-GLAREAALASGLS- 254 (354)
T ss_dssp SCSCCHHHHHHHHHHTTC-------CTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHH-HHHHHHHHHTTCT-
T ss_pred CCCcCHHHHHHHHHHhCC-------CCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHH-HHHHHHHHHcCCC-
Confidence 355667777777766543 257899999999999999999875 24699999999998 9999999999987
Q ss_pred cEEEEEcchhhHHHHHhhhcCCCCCeeEEEEcCCCCC
Q 022298 207 VSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTA 243 (299)
Q Consensus 207 ~~~vi~~D~~~~l~~~~~~~~~~~~fDlI~iDPPY~~ 243 (299)
+++++++|+.++.. ....||+|++||||..
T Consensus 255 ~i~~~~~D~~~~~~-------~~~~~D~Ii~npPyg~ 284 (354)
T 3tma_A 255 WIRFLRADARHLPR-------FFPEVDRILANPPHGL 284 (354)
T ss_dssp TCEEEECCGGGGGG-------TCCCCSEEEECCCSCC
T ss_pred ceEEEeCChhhCcc-------ccCCCCEEEECCCCcC
Confidence 68999999988642 1356899999999985
No 33
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.40 E-value=2.3e-12 Score=121.41 Aligned_cols=76 Identities=13% Similarity=0.178 Sum_probs=68.8
Q ss_pred CCCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCeeE
Q 022298 155 RPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDY 234 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fDl 234 (299)
.+.+|||+|||+|.++++ ++ |+.+|+++|+|+.++ +.+++|++.+++.++++++++|+.+++ ++||+
T Consensus 195 ~~~~VLDlg~G~G~~~l~-a~-~~~~V~~vD~s~~ai-~~a~~n~~~n~l~~~v~~~~~D~~~~~----------~~fD~ 261 (336)
T 2yx1_A 195 LNDVVVDMFAGVGPFSIA-CK-NAKKIYAIDINPHAI-ELLKKNIKLNKLEHKIIPILSDVREVD----------VKGNR 261 (336)
T ss_dssp TTCEEEETTCTTSHHHHH-TT-TSSEEEEEESCHHHH-HHHHHHHHHTTCTTTEEEEESCGGGCC----------CCEEE
T ss_pred CCCEEEEccCccCHHHHh-cc-CCCEEEEEECCHHHH-HHHHHHHHHcCCCCcEEEEECChHHhc----------CCCcE
Confidence 578999999999999999 66 778999999999998 999999999998767999999998763 57999
Q ss_pred EEEcCCCCC
Q 022298 235 MSVTPPYTA 243 (299)
Q Consensus 235 I~iDPPY~~ 243 (299)
|++|||+..
T Consensus 262 Vi~dpP~~~ 270 (336)
T 2yx1_A 262 VIMNLPKFA 270 (336)
T ss_dssp EEECCTTTG
T ss_pred EEECCcHhH
Confidence 999999875
No 34
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.40 E-value=1.7e-12 Score=126.46 Aligned_cols=113 Identities=18% Similarity=0.158 Sum_probs=86.8
Q ss_pred CeEEecCCCCCCCCC---HHHHHHHHHHHHHhcCCCCCCCCCCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHH
Q 022298 118 RKKLLSPKGMDVRPM---MEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNV 194 (299)
Q Consensus 118 Gr~L~~p~~~~~RPt---td~Vrealfn~L~~~~~~~~~~~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~ 194 (299)
|..+.++.+....+. ++.+.+.+.+.+.. ..+.+|||+|||+|.+++.++.+ +.+|+++|+++.++ +.
T Consensus 253 g~~~~~~~~~f~q~n~~~~e~l~~~~~~~l~~-------~~~~~VLDlgcG~G~~~~~la~~-~~~V~gvD~s~~al-~~ 323 (433)
T 1uwv_A 253 GLRLTFSPRDFIQVNAGVNQKMVARALEWLDV-------QPEDRVLDLFCGMGNFTLPLATQ-AASVVGVEGVPALV-EK 323 (433)
T ss_dssp TEEEECCSSSCCCSBHHHHHHHHHHHHHHHTC-------CTTCEEEEESCTTTTTHHHHHTT-SSEEEEEESCHHHH-HH
T ss_pred CEEEEECcccccccCHHHHHHHHHHHHHhhcC-------CCCCEEEECCCCCCHHHHHHHhh-CCEEEEEeCCHHHH-HH
Confidence 888888777665443 34455555555542 24679999999999999988777 45799999999998 99
Q ss_pred HHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCeeEEEEcCCCCC
Q 022298 195 LIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTA 243 (299)
Q Consensus 195 a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fDlI~iDPPY~~ 243 (299)
+++|++.+++. +++++++|+.+++... ....++||+|++||||..
T Consensus 324 A~~n~~~~~~~-~v~f~~~d~~~~l~~~---~~~~~~fD~Vv~dPPr~g 368 (433)
T 1uwv_A 324 GQQNARLNGLQ-NVTFYHENLEEDVTKQ---PWAKNGFDKVLLDPARAG 368 (433)
T ss_dssp HHHHHHHTTCC-SEEEEECCTTSCCSSS---GGGTTCCSEEEECCCTTC
T ss_pred HHHHHHHcCCC-ceEEEECCHHHHhhhh---hhhcCCCCEEEECCCCcc
Confidence 99999999986 5899999998754210 011357999999999985
No 35
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=99.38 E-value=5.3e-13 Score=121.93 Aligned_cols=84 Identities=18% Similarity=0.107 Sum_probs=70.4
Q ss_pred CCCEEEEECCccchHHHHHHHcCCCEEEEEeCCH-------HHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcC
Q 022298 155 RPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDP-------WVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVG 227 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~-------~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~ 227 (299)
.+.+|||+|||+|.+++.++++|+ +|+++|+|+ .++ +.+++|++.+++.++++++++|+.+++.... .
T Consensus 83 ~~~~VLDlgcG~G~~a~~lA~~g~-~V~~vD~s~~~~~ll~~~l-~~a~~n~~~~~~~~ri~~~~~d~~~~l~~~~---~ 157 (258)
T 2r6z_A 83 AHPTVWDATAGLGRDSFVLASLGL-TVTAFEQHPAVACLLSDGI-RRALLNPETQDTAARINLHFGNAAEQMPALV---K 157 (258)
T ss_dssp GCCCEEETTCTTCHHHHHHHHTTC-CEEEEECCHHHHHHHHHHH-HHHHHSHHHHHHHTTEEEEESCHHHHHHHHH---H
T ss_pred CcCeEEEeeCccCHHHHHHHHhCC-EEEEEECChhhhHHHHHHH-HHHHhHHHhhCCccCeEEEECCHHHHHHhhh---c
Confidence 467999999999999999988886 699999999 998 9999999998877779999999998875431 0
Q ss_pred CCCCeeEEEEcCCCCC
Q 022298 228 KDGPFDYMSVTPPYTA 243 (299)
Q Consensus 228 ~~~~fDlI~iDPPY~~ 243 (299)
..+.||+|++||||..
T Consensus 158 ~~~~fD~V~~dP~~~~ 173 (258)
T 2r6z_A 158 TQGKPDIVYLDPMYPE 173 (258)
T ss_dssp HHCCCSEEEECCCC--
T ss_pred cCCCccEEEECCCCCC
Confidence 0157999999999975
No 36
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.37 E-value=1.4e-12 Score=124.80 Aligned_cols=83 Identities=23% Similarity=0.272 Sum_probs=71.8
Q ss_pred CCCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCeeE
Q 022298 155 RPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDY 234 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fDl 234 (299)
.+.+|||+|||+|.+++.++.+ +.+|+++|+|+.++ +.+++|++.+++.+ ++++++|+.+++.... ....+||+
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~-~~~v~~vD~s~~~~-~~a~~n~~~n~~~~-~~~~~~d~~~~~~~~~---~~~~~fD~ 282 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALG-FREVVAVDSSAEAL-RRAEENARLNGLGN-VRVLEANAFDLLRRLE---KEGERFDL 282 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHH-EEEEEEEESCHHHH-HHHHHHHHHTTCTT-EEEEESCHHHHHHHHH---HTTCCEEE
T ss_pred CCCeEEEeeeccCHHHHHHHHh-CCEEEEEECCHHHH-HHHHHHHHHcCCCC-ceEEECCHHHHHHHHH---hcCCCeeE
Confidence 4679999999999999998887 66899999999998 99999999999877 8999999999875431 12468999
Q ss_pred EEEcCCCCC
Q 022298 235 MSVTPPYTA 243 (299)
Q Consensus 235 I~iDPPY~~ 243 (299)
|++||||..
T Consensus 283 Ii~dpP~~~ 291 (382)
T 1wxx_A 283 VVLDPPAFA 291 (382)
T ss_dssp EEECCCCSC
T ss_pred EEECCCCCC
Confidence 999999844
No 37
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.37 E-value=9.6e-13 Score=119.36 Aligned_cols=89 Identities=22% Similarity=0.257 Sum_probs=70.7
Q ss_pred CCCEEEEECCccchHHHHHHHcC-CCEEEEEeCCHHHHHHHHHHHHHH---hCCCCcEEEEEcchhhHHHHHhhhcCCCC
Q 022298 155 RPGRWLDLYSGTGSVGIEAISRG-CSEVHFVEMDPWVVSNVLIPNLEW---TGFLDVSSIHTVRVETFLERAEQFVGKDG 230 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSrG-a~~V~~VD~n~~Al~~~a~~N~~~---~g~~~~~~vi~~D~~~~l~~~~~~~~~~~ 230 (299)
.+.+|||+|||+|.+++.++.++ ..+|++||+++.++ +.+++|++. +++.++++++++|+.++......-....+
T Consensus 36 ~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~-~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~ 114 (260)
T 2ozv_A 36 RACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMA-EFARRSLELPDNAAFSARIEVLEADVTLRAKARVEAGLPDE 114 (260)
T ss_dssp SCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHH-HHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHTTCCTT
T ss_pred CCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHH-HHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhhccCCC
Confidence 46799999999999999998885 45899999999998 999999998 88877899999999887432100001246
Q ss_pred CeeEEEEcCCCCCC
Q 022298 231 PFDYMSVTPPYTAV 244 (299)
Q Consensus 231 ~fDlI~iDPPY~~~ 244 (299)
+||+|++||||...
T Consensus 115 ~fD~Vv~nPPy~~~ 128 (260)
T 2ozv_A 115 HFHHVIMNPPYNDA 128 (260)
T ss_dssp CEEEEEECCCC---
T ss_pred CcCEEEECCCCcCC
Confidence 89999999999764
No 38
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=99.37 E-value=8.7e-13 Score=128.31 Aligned_cols=81 Identities=20% Similarity=0.137 Sum_probs=68.2
Q ss_pred CCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHh--CCCCcEEEEEcchhhHHHHHhhhcCCCCCee
Q 022298 156 PGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWT--GFLDVSSIHTVRVETFLERAEQFVGKDGPFD 233 (299)
Q Consensus 156 ~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~--g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fD 233 (299)
+.+|||+|||+|..++.++.+| .+|++||+|+.++ +.+++|++.+ |+ ++++++++|+.+++.... .++||
T Consensus 94 g~~VLDLgcG~G~~al~LA~~g-~~V~~VD~s~~~l-~~Ar~N~~~~~~gl-~~i~~i~~Da~~~L~~~~-----~~~fD 165 (410)
T 3ll7_A 94 GTKVVDLTGGLGIDFIALMSKA-SQGIYIERNDETA-VAARHNIPLLLNEG-KDVNILTGDFKEYLPLIK-----TFHPD 165 (410)
T ss_dssp TCEEEESSCSSSHHHHHHHTTC-SEEEEEESCHHHH-HHHHHHHHHHSCTT-CEEEEEESCGGGSHHHHH-----HHCCS
T ss_pred CCEEEEeCCCchHHHHHHHhcC-CEEEEEECCHHHH-HHHHHhHHHhccCC-CcEEEEECcHHHhhhhcc-----CCCce
Confidence 7899999999999998655555 5899999999998 9999999999 87 569999999998765421 24799
Q ss_pred EEEEcCCCCCC
Q 022298 234 YMSVTPPYTAV 244 (299)
Q Consensus 234 lI~iDPPY~~~ 244 (299)
+||+||||...
T Consensus 166 vV~lDPPrr~~ 176 (410)
T 3ll7_A 166 YIYVDPARRSG 176 (410)
T ss_dssp EEEECCEEC--
T ss_pred EEEECCCCcCC
Confidence 99999999873
No 39
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.36 E-value=3.1e-12 Score=117.45 Aligned_cols=127 Identities=15% Similarity=0.136 Sum_probs=94.8
Q ss_pred cccccccceEEEEeeeeCCeEEecCCCCCCCCCHHH----HHHHHHHHH-HhcCCCCCCCCCCEEEEECCccchHHHHHH
Q 022298 100 QEERTTHRLLQVLGGKARRKKLLSPKGMDVRPMMEV----VKGAAFDIL-QSAGGCPASLRPGRWLDLYSGTGSVGIEAI 174 (299)
Q Consensus 100 ~~p~~~~~~mrIi~Gk~~Gr~L~~p~~~~~RPttd~----Vrealfn~L-~~~~~~~~~~~~~~VLDLfaGSGalgIEAl 174 (299)
+.-+...+-++|+.+...|+.|... |. ++++++ ..|.+++.. ... ..+.+|||+|||+|.++.+++
T Consensus 24 ~~~~s~~~~i~v~~~~~~g~~L~ld-g~--~q~~~~de~~y~e~l~~~~l~~~------~~~~~VLdiG~G~G~~~~~l~ 94 (275)
T 1iy9_A 24 HTEQTEFQHLEMVETEEFGNMLFLD-GM--VMTSEKDEFVYHEMVAHVPLFTH------PNPEHVLVVGGGDGGVIREIL 94 (275)
T ss_dssp EEEECSSCEEEEEEETTTEEEEEET-TE--EEEETTTHHHHHHHHHHHHHHHS------SSCCEEEEESCTTCHHHHHHT
T ss_pred EEEECCCceEEEEEcCCCCEEEEEC-CE--EeecccchhHHHHHHHHHHHhhC------CCCCEEEEECCchHHHHHHHH
Confidence 3334445678888888778888776 32 333332 556666542 111 246899999999999999999
Q ss_pred Hc-CCCEEEEEeCCHHHHHHHHHHHHHHh--CC-CCcEEEEEcchhhHHHHHhhhcCCCCCeeEEEEcCCCC
Q 022298 175 SR-GCSEVHFVEMDPWVVSNVLIPNLEWT--GF-LDVSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYT 242 (299)
Q Consensus 175 Sr-Ga~~V~~VD~n~~Al~~~a~~N~~~~--g~-~~~~~vi~~D~~~~l~~~~~~~~~~~~fDlI~iDPPY~ 242 (299)
++ |..+|++||+|+.++ +.+++|+..+ ++ .++++++.+|+.+++.. ..++||+|++|+|+.
T Consensus 95 ~~~~~~~v~~vEid~~~v-~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~------~~~~fD~Ii~d~~~~ 159 (275)
T 1iy9_A 95 KHPSVKKATLVDIDGKVI-EYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAK------SENQYDVIMVDSTEP 159 (275)
T ss_dssp TCTTCSEEEEEESCHHHH-HHHHHHCHHHHTTTTSTTEEEEESCSHHHHHT------CCSCEEEEEESCSSC
T ss_pred hCCCCceEEEEECCHHHH-HHHHHHhHhhccccCCCceEEEECcHHHHHhh------CCCCeeEEEECCCCC
Confidence 87 778999999999998 9999998653 33 35799999999988743 246899999999874
No 40
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.35 E-value=3.3e-12 Score=116.81 Aligned_cols=79 Identities=14% Similarity=0.069 Sum_probs=68.9
Q ss_pred CCCEEEEECCccchHHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCee
Q 022298 155 RPGRWLDLYSGTGSVGIEAISR-GCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFD 233 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSr-Ga~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fD 233 (299)
.+.+|||+|||+|.+++.++.+ ++.+|++||+|+.++ +.+++|++.+++.+ +.++++|+.++ .. .++||
T Consensus 119 ~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av-~~a~~n~~~n~l~~-~~~~~~d~~~~-~~-------~~~~D 188 (272)
T 3a27_A 119 ENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAY-HYLCENIKLNKLNN-VIPILADNRDV-EL-------KDVAD 188 (272)
T ss_dssp TTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHH-HHHHHHHHHTTCSS-EEEEESCGGGC-CC-------TTCEE
T ss_pred CCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHH-HHHHHHHHHcCCCC-EEEEECChHHc-Cc-------cCCce
Confidence 5789999999999999999887 456899999999998 99999999999865 78999999876 21 36899
Q ss_pred EEEEcCCCCC
Q 022298 234 YMSVTPPYTA 243 (299)
Q Consensus 234 lI~iDPPY~~ 243 (299)
+|++|||+..
T Consensus 189 ~Vi~d~p~~~ 198 (272)
T 3a27_A 189 RVIMGYVHKT 198 (272)
T ss_dssp EEEECCCSSG
T ss_pred EEEECCcccH
Confidence 9999999843
No 41
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.34 E-value=5.1e-12 Score=121.14 Aligned_cols=110 Identities=16% Similarity=0.175 Sum_probs=86.1
Q ss_pred CeEEecCCCCCCCCCHHHHHHHHHHHHHhcCCCCCCCCCCEEEEECCccchHHHHHHHcC-CCEEEEEeCCHHHHHHHHH
Q 022298 118 RKKLLSPKGMDVRPMMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRG-CSEVHFVEMDPWVVSNVLI 196 (299)
Q Consensus 118 Gr~L~~p~~~~~RPttd~Vrealfn~L~~~~~~~~~~~~~~VLDLfaGSGalgIEAlSrG-a~~V~~VD~n~~Al~~~a~ 196 (299)
+..+...++...+...+...+.+++.+.. ..+.+|||+|||+|.++++++.++ ..+|++||+|+.++ +.++
T Consensus 192 ~~~~~~~pg~Fs~~~~d~~~~~ll~~l~~-------~~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al-~~Ar 263 (375)
T 4dcm_A 192 DWTIHNHANVFSRTGLDIGARFFMQHLPE-------NLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAV-ASSR 263 (375)
T ss_dssp TEEEEECTTCTTCSSCCHHHHHHHHTCCC-------SCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHH-HHHH
T ss_pred ceEEEeCCCcccCCcccHHHHHHHHhCcc-------cCCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHH-HHHH
Confidence 45566666666666767666666666643 245899999999999999999885 56899999999998 9999
Q ss_pred HHHHHhCCCC--cEEEEEcchhhHHHHHhhhcCCCCCeeEEEEcCCCCC
Q 022298 197 PNLEWTGFLD--VSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTA 243 (299)
Q Consensus 197 ~N~~~~g~~~--~~~vi~~D~~~~l~~~~~~~~~~~~fDlI~iDPPY~~ 243 (299)
+|++.+++.+ +++++.+|+.+.+ ..++||+|++||||..
T Consensus 264 ~n~~~ngl~~~~~v~~~~~D~~~~~--------~~~~fD~Ii~nppfh~ 304 (375)
T 4dcm_A 264 LNVETNMPEALDRCEFMINNALSGV--------EPFRFNAVLCNPPFHQ 304 (375)
T ss_dssp HHHHHHCGGGGGGEEEEECSTTTTC--------CTTCEEEEEECCCC--
T ss_pred HHHHHcCCCcCceEEEEechhhccC--------CCCCeeEEEECCCccc
Confidence 9999998754 4778999988743 2468999999999975
No 42
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.33 E-value=5.6e-12 Score=114.45 Aligned_cols=120 Identities=13% Similarity=0.059 Sum_probs=93.0
Q ss_pred EeeeeCCeEEecCCCCC---CCCCHHHHHHHHHHHH-----------HhcCCCCCCCCCCEEEEECCccchHHHHHHHc-
Q 022298 112 LGGKARRKKLLSPKGMD---VRPMMEVVKGAAFDIL-----------QSAGGCPASLRPGRWLDLYSGTGSVGIEAISR- 176 (299)
Q Consensus 112 i~Gk~~Gr~L~~p~~~~---~RPttd~Vrealfn~L-----------~~~~~~~~~~~~~~VLDLfaGSGalgIEAlSr- 176 (299)
+.|+..|..+.++.+.. .||+++.+.+++++.. ....+ ...+.+|||+|||+|.++++++++
T Consensus 58 i~g~~~g~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~i~~~~~---~~~~~~VLDiG~G~G~~~~~la~~~ 134 (277)
T 1o54_A 58 VFEKGPGEIIRTSAGKKGYILIPSLIDEIMNMKRRTQIVYPKDSSFIAMMLD---VKEGDRIIDTGVGSGAMCAVLARAV 134 (277)
T ss_dssp HTTSCTTCEEECTTCCEEEEECCCHHHHHHTCCC-CCCCCHHHHHHHHHHTT---CCTTCEEEEECCTTSHHHHHHHHHT
T ss_pred hcCCCCCcEEEEcCCcEEEEeCCCHHHHHhhccccCCccCHHHHHHHHHHhC---CCCCCEEEEECCcCCHHHHHHHHHh
Confidence 34778899999888743 4999998776543321 11111 135789999999999999998887
Q ss_pred C-CCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCeeEEEEcCCCCC
Q 022298 177 G-CSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTA 243 (299)
Q Consensus 177 G-a~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fDlI~iDPPY~~ 243 (299)
| ..+|+++|+++.++ +.+++|++.+++.++++++.+|+.+.+ ..+.||+|++|||+..
T Consensus 135 ~~~~~v~~vD~s~~~~-~~a~~~~~~~~~~~~v~~~~~d~~~~~--------~~~~~D~V~~~~~~~~ 193 (277)
T 1o54_A 135 GSSGKVFAYEKREEFA-KLAESNLTKWGLIERVTIKVRDISEGF--------DEKDVDALFLDVPDPW 193 (277)
T ss_dssp TTTCEEEEECCCHHHH-HHHHHHHHHTTCGGGEEEECCCGGGCC--------SCCSEEEEEECCSCGG
T ss_pred CCCcEEEEEECCHHHH-HHHHHHHHHcCCCCCEEEEECCHHHcc--------cCCccCEEEECCcCHH
Confidence 5 56899999999998 999999999988667899999987752 1357999999999763
No 43
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.33 E-value=6.4e-12 Score=108.12 Aligned_cols=94 Identities=17% Similarity=0.251 Sum_probs=72.5
Q ss_pred CCCHHHHHHHHHHHHHhcCCCCCCCCCCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEE
Q 022298 130 RPMMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSS 209 (299)
Q Consensus 130 RPttd~Vrealfn~L~~~~~~~~~~~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~ 209 (299)
.++...+.+.+...+.... ...+.+|||+|||+|.+++.++.+|+.+|+++|+|+.++ +.+++|+. +++
T Consensus 30 ~~~~~~~~~~l~~~~~~~~----~~~~~~vlD~gcG~G~~~~~l~~~~~~~v~~vD~~~~~~-~~a~~~~~------~~~ 98 (200)
T 1ne2_A 30 YPTDASTAAYFLIEIYNDG----NIGGRSVIDAGTGNGILACGSYLLGAESVTAFDIDPDAI-ETAKRNCG------GVN 98 (200)
T ss_dssp CCCCHHHHHHHHHHHHHHT----SSBTSEEEEETCTTCHHHHHHHHTTBSEEEEEESCHHHH-HHHHHHCT------TSE
T ss_pred cCCCHHHHHHHHHHHHhcC----CCCCCEEEEEeCCccHHHHHHHHcCCCEEEEEECCHHHH-HHHHHhcC------CCE
Confidence 4555556666655554321 135789999999999999998888887899999999998 99999975 367
Q ss_pred EEEcchhhHHHHHhhhcCCCCCeeEEEEcCCCCCC
Q 022298 210 IHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTAV 244 (299)
Q Consensus 210 vi~~D~~~~l~~~~~~~~~~~~fDlI~iDPPY~~~ 244 (299)
++++|+.++ .+.||+|++||||...
T Consensus 99 ~~~~d~~~~----------~~~~D~v~~~~p~~~~ 123 (200)
T 1ne2_A 99 FMVADVSEI----------SGKYDTWIMNPPFGSV 123 (200)
T ss_dssp EEECCGGGC----------CCCEEEEEECCCC---
T ss_pred EEECcHHHC----------CCCeeEEEECCCchhc
Confidence 899998763 2689999999999763
No 44
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.32 E-value=2.5e-12 Score=112.67 Aligned_cols=80 Identities=19% Similarity=0.141 Sum_probs=66.6
Q ss_pred CCCEEEEECCc-cchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCee
Q 022298 155 RPGRWLDLYSG-TGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFD 233 (299)
Q Consensus 155 ~~~~VLDLfaG-SGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fD 233 (299)
++.+|||+||| +|.+++.++.++..+|+++|+|+.++ +.+++|++.++. +++++++|+..+.. ...++||
T Consensus 55 ~~~~vLDlG~G~~G~~~~~la~~~~~~v~~vD~s~~~~-~~a~~~~~~~~~--~v~~~~~d~~~~~~------~~~~~fD 125 (230)
T 3evz_A 55 GGEVALEIGTGHTAMMALMAEKFFNCKVTATEVDEEFF-EYARRNIERNNS--NVRLVKSNGGIIKG------VVEGTFD 125 (230)
T ss_dssp SSCEEEEECCTTTCHHHHHHHHHHCCEEEEEECCHHHH-HHHHHHHHHTTC--CCEEEECSSCSSTT------TCCSCEE
T ss_pred CCCEEEEcCCCHHHHHHHHHHHhcCCEEEEEECCHHHH-HHHHHHHHHhCC--CcEEEeCCchhhhh------cccCcee
Confidence 57899999999 99999998887445799999999998 999999999987 48899999643321 1237899
Q ss_pred EEEEcCCCCC
Q 022298 234 YMSVTPPYTA 243 (299)
Q Consensus 234 lI~iDPPY~~ 243 (299)
+|++||||..
T Consensus 126 ~I~~npp~~~ 135 (230)
T 3evz_A 126 VIFSAPPYYD 135 (230)
T ss_dssp EEEECCCCC-
T ss_pred EEEECCCCcC
Confidence 9999999964
No 45
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.29 E-value=1.1e-12 Score=117.38 Aligned_cols=86 Identities=19% Similarity=0.111 Sum_probs=65.4
Q ss_pred CCCEEEEECCccchHHHHHHHc---CCCEEEEEeCCHHHHHHHHHHHHHHh---CCCCc---------------------
Q 022298 155 RPGRWLDLYSGTGSVGIEAISR---GCSEVHFVEMDPWVVSNVLIPNLEWT---GFLDV--------------------- 207 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSr---Ga~~V~~VD~n~~Al~~~a~~N~~~~---g~~~~--------------------- 207 (299)
.+.+|||+|||||.++++++.+ +..+|+++|+|+.++ +.+++|+..+ ++.++
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l-~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPL-ELAAKNLALLSPAGLTARELERREQSERFGKPSYLEAAQ 129 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHH-HHHHHHHHTTSHHHHHHHHHHHHHHHHHHCCHHHHHHHH
T ss_pred CCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHH-HHHHHHHHHhhhccccccchhhhhhhhhcccccchhhhh
Confidence 4679999999999999998876 234799999999998 9999999876 44322
Q ss_pred ----EE-------------EEEcchhhHHHHHhhhcCCCCCeeEEEEcCCCCC
Q 022298 208 ----SS-------------IHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTA 243 (299)
Q Consensus 208 ----~~-------------vi~~D~~~~l~~~~~~~~~~~~fDlI~iDPPY~~ 243 (299)
++ ++++|+.+...... . ....+||+|++||||..
T Consensus 130 ~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~-~-~~~~~fD~Iv~npp~~~ 180 (250)
T 1o9g_A 130 AARRLRERLTAEGGALPCAIRTADVFDPRALSA-V-LAGSAPDVVLTDLPYGE 180 (250)
T ss_dssp HHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHH-H-HTTCCCSEEEEECCGGG
T ss_pred hhhhhhhhccccccccccceeeccccccccccc-c-cCCCCceEEEeCCCeec
Confidence 45 88999877542100 0 01348999999999964
No 46
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.29 E-value=3.5e-11 Score=117.27 Aligned_cols=108 Identities=18% Similarity=0.196 Sum_probs=82.9
Q ss_pred eCCeEEecCCCCCCCCCHHHHHHHHHHHHHhcCCCCCCCCCCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHH
Q 022298 116 ARRKKLLSPKGMDVRPMMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVL 195 (299)
Q Consensus 116 ~~Gr~L~~p~~~~~RPttd~Vrealfn~L~~~~~~~~~~~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a 195 (299)
+.|.++.++.+.......+ ..+.++..+... ..+.+|||+|||+|.+++.++.++ .+|++||+|+.++ +.+
T Consensus 258 ~~g~~f~~~~~~F~q~n~~-~~e~l~~~~~~~------~~~~~VLDlgcG~G~~sl~la~~~-~~V~gvD~s~~ai-~~A 328 (425)
T 2jjq_A 258 LDDVDYLIHPNSFFQTNSY-QAVNLVRKVSEL------VEGEKILDMYSGVGTFGIYLAKRG-FNVKGFDSNEFAI-EMA 328 (425)
T ss_dssp ETTEEEEECTTSCCCSBHH-HHHHHHHHHHHH------CCSSEEEEETCTTTHHHHHHHHTT-CEEEEEESCHHHH-HHH
T ss_pred ECCEEEEEccccccccCHH-HHHHHHHHhhcc------CCCCEEEEeeccchHHHHHHHHcC-CEEEEEECCHHHH-HHH
Confidence 3577777777655554433 334444443221 257899999999999999887765 4899999999998 999
Q ss_pred HHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCeeEEEEcCCCCC
Q 022298 196 IPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTA 243 (299)
Q Consensus 196 ~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fDlI~iDPPY~~ 243 (299)
++|++.+++. ++++++|+.+++ ..+||+|++||||..
T Consensus 329 ~~n~~~ngl~--v~~~~~d~~~~~---------~~~fD~Vv~dPPr~g 365 (425)
T 2jjq_A 329 RRNVEINNVD--AEFEVASDREVS---------VKGFDTVIVDPPRAG 365 (425)
T ss_dssp HHHHHHHTCC--EEEEECCTTTCC---------CTTCSEEEECCCTTC
T ss_pred HHHHHHcCCc--EEEEECChHHcC---------ccCCCEEEEcCCccc
Confidence 9999999985 899999998764 137999999999864
No 47
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.29 E-value=1.6e-11 Score=118.11 Aligned_cols=99 Identities=26% Similarity=0.303 Sum_probs=82.1
Q ss_pred CCCCHHHHHHHHHHHHHhcCCCCCCCCCCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcE
Q 022298 129 VRPMMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVS 208 (299)
Q Consensus 129 ~RPttd~Vrealfn~L~~~~~~~~~~~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~ 208 (299)
.++++..+.+.+.+.+... ...+.+|||+|||+|.+++.++.+|+ +|++||+|+.++ +.+++|++.+++. +
T Consensus 212 ~d~~t~~ll~~l~~~l~~~-----~~~~~~VLDlGcG~G~~~~~la~~g~-~V~gvDis~~al-~~A~~n~~~~~~~--v 282 (381)
T 3dmg_A 212 VDPASLLLLEALQERLGPE-----GVRGRQVLDLGAGYGALTLPLARMGA-EVVGVEDDLASV-LSLQKGLEANALK--A 282 (381)
T ss_dssp CCHHHHHHHHHHHHHHCTT-----TTTTCEEEEETCTTSTTHHHHHHTTC-EEEEEESBHHHH-HHHHHHHHHTTCC--C
T ss_pred CCHHHHHHHHHHHHhhccc-----CCCCCEEEEEeeeCCHHHHHHHHcCC-EEEEEECCHHHH-HHHHHHHHHcCCC--e
Confidence 4677788888887766311 13578999999999999999999987 799999999998 9999999999874 6
Q ss_pred EEEEcchhhHHHHHhhhcCCCCCeeEEEEcCCCCC
Q 022298 209 SIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTA 243 (299)
Q Consensus 209 ~vi~~D~~~~l~~~~~~~~~~~~fDlI~iDPPY~~ 243 (299)
+++.+|+.+... ..++||+|++||||..
T Consensus 283 ~~~~~D~~~~~~-------~~~~fD~Ii~npp~~~ 310 (381)
T 3dmg_A 283 QALHSDVDEALT-------EEARFDIIVTNPPFHV 310 (381)
T ss_dssp EEEECSTTTTSC-------TTCCEEEEEECCCCCT
T ss_pred EEEEcchhhccc-------cCCCeEEEEECCchhh
Confidence 889999887641 1368999999999986
No 48
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.28 E-value=3.2e-11 Score=101.18 Aligned_cols=98 Identities=18% Similarity=0.131 Sum_probs=82.9
Q ss_pred CCCCHHHHHHHHHHHHHhcCCCCCCCCCCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcE
Q 022298 129 VRPMMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVS 208 (299)
Q Consensus 129 ~RPttd~Vrealfn~L~~~~~~~~~~~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~ 208 (299)
+|++.+.+++.+.+.+.. ..+.+|||+|||+|.+++.++.++ .+|+++|+|+.++ +.+++|++.++..+++
T Consensus 14 ~~~~~~~~~~~~~~~~~~-------~~~~~vldiG~G~G~~~~~l~~~~-~~v~~~D~~~~~~-~~a~~~~~~~~~~~~~ 84 (192)
T 1l3i_A 14 PGPTAMEVRCLIMCLAEP-------GKNDVAVDVGCGTGGVTLELAGRV-RRVYAIDRNPEAI-STTEMNLQRHGLGDNV 84 (192)
T ss_dssp CCCCCHHHHHHHHHHHCC-------CTTCEEEEESCTTSHHHHHHHTTS-SEEEEEESCHHHH-HHHHHHHHHTTCCTTE
T ss_pred CCCChHHHHHHHHHhcCC-------CCCCEEEEECCCCCHHHHHHHHhc-CEEEEEECCHHHH-HHHHHHHHHcCCCcce
Confidence 468999999988887753 357899999999999999988888 6899999999998 9999999999886668
Q ss_pred EEEEcchhhHHHHHhhhcCCCCCeeEEEEcCCCC
Q 022298 209 SIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYT 242 (299)
Q Consensus 209 ~vi~~D~~~~l~~~~~~~~~~~~fDlI~iDPPY~ 242 (299)
+++++|+.+.+.. .+.||+|++++++.
T Consensus 85 ~~~~~d~~~~~~~-------~~~~D~v~~~~~~~ 111 (192)
T 1l3i_A 85 TLMEGDAPEALCK-------IPDIDIAVVGGSGG 111 (192)
T ss_dssp EEEESCHHHHHTT-------SCCEEEEEESCCTT
T ss_pred EEEecCHHHhccc-------CCCCCEEEECCchH
Confidence 9999998874321 25899999999864
No 49
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.28 E-value=3.2e-11 Score=100.66 Aligned_cols=94 Identities=18% Similarity=0.171 Sum_probs=79.8
Q ss_pred CCCCHHHHHHHHHHHHHhcCCCCCCCCCCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcE
Q 022298 129 VRPMMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVS 208 (299)
Q Consensus 129 ~RPttd~Vrealfn~L~~~~~~~~~~~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~ 208 (299)
.+++.+.+.+.+++.+.. ..+.+|||+|||+|.+++.++. +..+|+++|+++.++ +.+++|++.+++. ++
T Consensus 16 ~~~~~~~~~~~~~~~~~~-------~~~~~vLdiG~G~G~~~~~l~~-~~~~v~~vD~~~~~~-~~a~~~~~~~~~~-~~ 85 (183)
T 2yxd_A 16 VPITKEEIRAVSIGKLNL-------NKDDVVVDVGCGSGGMTVEIAK-RCKFVYAIDYLDGAI-EVTKQNLAKFNIK-NC 85 (183)
T ss_dssp BCCCCHHHHHHHHHHHCC-------CTTCEEEEESCCCSHHHHHHHT-TSSEEEEEECSHHHH-HHHHHHHHHTTCC-SE
T ss_pred CCcCHHHHHHHHHHHcCC-------CCCCEEEEeCCCCCHHHHHHHh-cCCeEEEEeCCHHHH-HHHHHHHHHcCCC-cE
Confidence 478888899888888753 3578999999999999998877 556899999999998 9999999999884 58
Q ss_pred EEEEcchhhHHHHHhhhcCCCCCeeEEEEcCC
Q 022298 209 SIHTVRVETFLERAEQFVGKDGPFDYMSVTPP 240 (299)
Q Consensus 209 ~vi~~D~~~~l~~~~~~~~~~~~fDlI~iDPP 240 (299)
+++++|+.+.+. .+.||+|++++|
T Consensus 86 ~~~~~d~~~~~~--------~~~~D~i~~~~~ 109 (183)
T 2yxd_A 86 QIIKGRAEDVLD--------KLEFNKAFIGGT 109 (183)
T ss_dssp EEEESCHHHHGG--------GCCCSEEEECSC
T ss_pred EEEECCcccccc--------CCCCcEEEECCc
Confidence 999999887431 268999999998
No 50
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.28 E-value=6.5e-12 Score=107.49 Aligned_cols=80 Identities=13% Similarity=0.052 Sum_probs=69.2
Q ss_pred CCCEEEEECCccchHHHHHHHc--CCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCe
Q 022298 155 RPGRWLDLYSGTGSVGIEAISR--GCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPF 232 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSr--Ga~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~f 232 (299)
++.+|||+|||+|.+++.++.+ +..+|+++|+++.++ +.+++|++.+++.++++++++|+.++... ..++|
T Consensus 22 ~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~-~~a~~~~~~~~~~~~v~~~~~d~~~~~~~------~~~~f 94 (197)
T 3eey_A 22 EGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAI-ANTTKKLTDLNLIDRVTLIKDGHQNMDKY------IDCPV 94 (197)
T ss_dssp TTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHH-HHHHHHHHHTTCGGGEEEECSCGGGGGGT------CCSCE
T ss_pred CCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHH-HHHHHHHHHcCCCCCeEEEECCHHHHhhh------ccCCc
Confidence 5789999999999999998876 345899999999998 99999999998866799999998776421 24689
Q ss_pred eEEEEcCCC
Q 022298 233 DYMSVTPPY 241 (299)
Q Consensus 233 DlI~iDPPY 241 (299)
|+|++||||
T Consensus 95 D~v~~~~~~ 103 (197)
T 3eey_A 95 KAVMFNLGY 103 (197)
T ss_dssp EEEEEEESB
T ss_pred eEEEEcCCc
Confidence 999999998
No 51
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.28 E-value=2.1e-11 Score=106.51 Aligned_cols=94 Identities=14% Similarity=0.046 Sum_probs=77.4
Q ss_pred CHHHHHHHHHHHHHhcCCCCCCCCCCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEE
Q 022298 132 MMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIH 211 (299)
Q Consensus 132 ttd~Vrealfn~L~~~~~~~~~~~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi 211 (299)
+...++..+++.+.. ..+.+|||+|||+|.++++++.++ .+|+++|+|+.++ +.+++|++.+++.++++++
T Consensus 39 ~~~~~~~~~l~~l~~-------~~~~~vLDlGcG~G~~~~~la~~~-~~v~~vD~s~~~~-~~a~~~~~~~g~~~~v~~~ 109 (204)
T 3njr_A 39 TKSPMRALTLAALAP-------RRGELLWDIGGGSGSVSVEWCLAG-GRAITIEPRADRI-ENIQKNIDTYGLSPRMRAV 109 (204)
T ss_dssp CCHHHHHHHHHHHCC-------CTTCEEEEETCTTCHHHHHHHHTT-CEEEEEESCHHHH-HHHHHHHHHTTCTTTEEEE
T ss_pred CcHHHHHHHHHhcCC-------CCCCEEEEecCCCCHHHHHHHHcC-CEEEEEeCCHHHH-HHHHHHHHHcCCCCCEEEE
Confidence 445677777777653 357899999999999999998885 4799999999998 9999999999987579999
Q ss_pred EcchhhHHHHHhhhcCCCCCeeEEEEcCCC
Q 022298 212 TVRVETFLERAEQFVGKDGPFDYMSVTPPY 241 (299)
Q Consensus 212 ~~D~~~~l~~~~~~~~~~~~fDlI~iDPPY 241 (299)
++|+.+.+.. ...||+|++++..
T Consensus 110 ~~d~~~~~~~-------~~~~D~v~~~~~~ 132 (204)
T 3njr_A 110 QGTAPAALAD-------LPLPEAVFIGGGG 132 (204)
T ss_dssp ESCTTGGGTT-------SCCCSEEEECSCC
T ss_pred eCchhhhccc-------CCCCCEEEECCcc
Confidence 9999875421 2579999999844
No 52
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.27 E-value=5.3e-12 Score=130.20 Aligned_cols=102 Identities=21% Similarity=0.243 Sum_probs=80.9
Q ss_pred CCCCHHHHHHHHHHHHHhcCCCCCCCCCCEEEEECCccchHHHHHHHcCC------------------------------
Q 022298 129 VRPMMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGC------------------------------ 178 (299)
Q Consensus 129 ~RPttd~Vrealfn~L~~~~~~~~~~~~~~VLDLfaGSGalgIEAlSrGa------------------------------ 178 (299)
.-|..+.+..++...... ..+..+||+|||||++.|||+.+++
T Consensus 171 ~apl~e~LAa~ll~~~~~-------~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~e 243 (703)
T 3v97_A 171 IAPIKETLAAAIVMRSGW-------QPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAE 243 (703)
T ss_dssp CCSSCHHHHHHHHHHTTC-------CTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHH
T ss_pred CCCCcHHHHHHHHHhhCC-------CCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHH
Confidence 346667777777665432 2467899999999999999987542
Q ss_pred -------------CEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCeeEEEEcCCCCC
Q 022298 179 -------------SEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTA 243 (299)
Q Consensus 179 -------------~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fDlI~iDPPY~~ 243 (299)
.+++++|+|+.++ +.++.|++..|+.+.+++.++|+.++... ...+.||+|++||||+.
T Consensus 244 a~~~~~~~~~~~~~~i~G~Did~~av-~~A~~N~~~agv~~~i~~~~~D~~~~~~~-----~~~~~~d~Iv~NPPYG~ 315 (703)
T 3v97_A 244 AQTRARKGLAEYSSHFYGSDSDARVI-QRARTNARLAGIGELITFEVKDVAQLTNP-----LPKGPYGTVLSNPPYGE 315 (703)
T ss_dssp HHHHHHHHHHHCCCCEEEEESCHHHH-HHHHHHHHHTTCGGGEEEEECCGGGCCCS-----CTTCCCCEEEECCCCCC
T ss_pred HHHHhhhccccCCccEEEEECCHHHH-HHHHHHHHHcCCCCceEEEECChhhCccc-----cccCCCCEEEeCCCccc
Confidence 3699999999998 99999999999988899999999875210 01237999999999985
No 53
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.26 E-value=2.3e-11 Score=111.80 Aligned_cols=122 Identities=16% Similarity=0.155 Sum_probs=89.8
Q ss_pred ccccceEEEEeeeeCCeEEecCCCCCCCCCHH----HHHHHHHHH-HHhcCCCCCCCCCCEEEEECCccchHHHHHHHcC
Q 022298 103 RTTHRLLQVLGGKARRKKLLSPKGMDVRPMME----VVKGAAFDI-LQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRG 177 (299)
Q Consensus 103 ~~~~~~mrIi~Gk~~Gr~L~~p~~~~~RPttd----~Vrealfn~-L~~~~~~~~~~~~~~VLDLfaGSGalgIEAlSrG 177 (299)
+...+.++|+.+...|+.|.... . +.+++ ...+.+... +... ..+.+|||+|||+|.++.++++++
T Consensus 27 ~s~~~~i~v~~~~~~g~~L~ldg-~--~q~~~~d~~~y~e~l~~~~l~~~------~~~~~VLdiG~G~G~~~~~l~~~~ 97 (281)
T 1mjf_A 27 LSKYQKIEVYETEGFGRLLALDG-T--VQLVTLGERSYHEPLVHPAMLAH------PKPKRVLVIGGGDGGTVREVLQHD 97 (281)
T ss_dssp ECSSCEEEEEEESSSCEEEEETT-E--EEEETTTTHHHHHHHHHHHHHHS------SCCCEEEEEECTTSHHHHHHTTSC
T ss_pred eCCCccEEEEECCCccEEEEECC-E--eeeccccchHHHHHHHHHHHhhC------CCCCeEEEEcCCcCHHHHHHHhCC
Confidence 34455678888887788877653 1 22222 245555542 2111 246899999999999999998887
Q ss_pred CCEEEEEeCCHHHHHHHHHHHHHHh--CC--------CCcEEEEEcchhhHHHHHhhhcCCCCCeeEEEEcCCCC
Q 022298 178 CSEVHFVEMDPWVVSNVLIPNLEWT--GF--------LDVSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYT 242 (299)
Q Consensus 178 a~~V~~VD~n~~Al~~~a~~N~~~~--g~--------~~~~~vi~~D~~~~l~~~~~~~~~~~~fDlI~iDPPY~ 242 (299)
..+|++||+|+.++ +.+++|+ .+ ++ .++++++.+|+.+++.. .++||+|++|+|+.
T Consensus 98 ~~~v~~vDid~~~i-~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~-------~~~fD~Ii~d~~~~ 163 (281)
T 1mjf_A 98 VDEVIMVEIDEDVI-MVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN-------NRGFDVIIADSTDP 163 (281)
T ss_dssp CSEEEEEESCHHHH-HHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCHHHHHHH-------CCCEEEEEEECCCC
T ss_pred CCEEEEEECCHHHH-HHHHHHH-hhccccccccccCCCCcEEEEECchHHHhcc-------cCCeeEEEECCCCC
Confidence 77999999999998 9999998 44 32 35689999999887643 36899999999863
No 54
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.26 E-value=1.9e-11 Score=103.55 Aligned_cols=80 Identities=11% Similarity=0.023 Sum_probs=65.4
Q ss_pred CCCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCeeE
Q 022298 155 RPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDY 234 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fDl 234 (299)
++.+|||+|||+|.+++.++.++ .+|+++|+|+.++ +.+++|++.+++ +++++++.|+..+... ..++||+
T Consensus 22 ~~~~vLDiGcG~G~~~~~la~~~-~~v~~vD~s~~~l-~~a~~~~~~~~~-~~v~~~~~~~~~l~~~------~~~~fD~ 92 (185)
T 3mti_A 22 DESIVVDATMGNGNDTAFLAGLS-KKVYAFDVQEQAL-GKTSQRLSDLGI-ENTELILDGHENLDHY------VREPIRA 92 (185)
T ss_dssp TTCEEEESCCTTSHHHHHHHTTS-SEEEEEESCHHHH-HHHHHHHHHHTC-CCEEEEESCGGGGGGT------CCSCEEE
T ss_pred CCCEEEEEcCCCCHHHHHHHHhC-CEEEEEECCHHHH-HHHHHHHHHcCC-CcEEEEeCcHHHHHhh------ccCCcCE
Confidence 57899999999999999988884 5799999999998 999999999998 5688998877654211 2468999
Q ss_pred EEEcCCCCC
Q 022298 235 MSVTPPYTA 243 (299)
Q Consensus 235 I~iDPPY~~ 243 (299)
|++|++|..
T Consensus 93 v~~~~~~~~ 101 (185)
T 3mti_A 93 AIFNLGYLP 101 (185)
T ss_dssp EEEEEC---
T ss_pred EEEeCCCCC
Confidence 999987754
No 55
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.25 E-value=7.4e-11 Score=101.66 Aligned_cols=95 Identities=16% Similarity=0.190 Sum_probs=76.9
Q ss_pred CCCCCHHHHHHHHHHHHHhcCCCCCCCCCCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCc
Q 022298 128 DVRPMMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDV 207 (299)
Q Consensus 128 ~~RPttd~Vrealfn~L~~~~~~~~~~~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~ 207 (299)
+.+|++..+.+.+...+ ..+.+|||+|||+|.+++.++..|..+|+++|+++.++ +.+++|++.++..+
T Consensus 42 ~~~~~~~~~~~~l~~~~---------~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~-~~a~~~~~~~~~~~- 110 (205)
T 3grz_A 42 GNHQTTQLAMLGIERAM---------VKPLTVADVGTGSGILAIAAHKLGAKSVLATDISDESM-TAAEENAALNGIYD- 110 (205)
T ss_dssp CCHHHHHHHHHHHHHHC---------SSCCEEEEETCTTSHHHHHHHHTTCSEEEEEESCHHHH-HHHHHHHHHTTCCC-
T ss_pred CCCccHHHHHHHHHHhc---------cCCCEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHH-HHHHHHHHHcCCCc-
Confidence 34555555554443322 24789999999999999998888887999999999998 99999999999876
Q ss_pred EEEEEcchhhHHHHHhhhcCCCCCeeEEEEcCCCC
Q 022298 208 SSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYT 242 (299)
Q Consensus 208 ~~vi~~D~~~~l~~~~~~~~~~~~fDlI~iDPPY~ 242 (299)
++++++|+.++. .++||+|++++|+.
T Consensus 111 v~~~~~d~~~~~---------~~~fD~i~~~~~~~ 136 (205)
T 3grz_A 111 IALQKTSLLADV---------DGKFDLIVANILAE 136 (205)
T ss_dssp CEEEESSTTTTC---------CSCEEEEEEESCHH
T ss_pred eEEEeccccccC---------CCCceEEEECCcHH
Confidence 889999987642 37899999999976
No 56
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.24 E-value=4e-11 Score=103.42 Aligned_cols=95 Identities=16% Similarity=0.053 Sum_probs=78.9
Q ss_pred CHHHHHHHHHHHHHhcCCCCCCCCCCEEEEECCccchHHHHHHHcC-CCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEE
Q 022298 132 MMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRG-CSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSI 210 (299)
Q Consensus 132 ttd~Vrealfn~L~~~~~~~~~~~~~~VLDLfaGSGalgIEAlSrG-a~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~v 210 (299)
+.+.++..+++.+.. .++.+|||+|||+|.+++.++.++ ..+|+++|+|+.++ +.+++|++.+++ +++++
T Consensus 24 ~~~~i~~~~l~~l~~-------~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~-~~a~~~~~~~~~-~~v~~ 94 (204)
T 3e05_A 24 TKQEVRAVTLSKLRL-------QDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYL-GFIRDNLKKFVA-RNVTL 94 (204)
T ss_dssp CCHHHHHHHHHHTTC-------CTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHH-HHHHHHHHHHTC-TTEEE
T ss_pred ChHHHHHHHHHHcCC-------CCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHH-HHHHHHHHHhCC-CcEEE
Confidence 667787777777653 357899999999999999988876 46899999999998 999999999998 56899
Q ss_pred EEcchhhHHHHHhhhcCCCCCeeEEEEcCCCC
Q 022298 211 HTVRVETFLERAEQFVGKDGPFDYMSVTPPYT 242 (299)
Q Consensus 211 i~~D~~~~l~~~~~~~~~~~~fDlI~iDPPY~ 242 (299)
+++|+.+.+. ..+.||+|++++++.
T Consensus 95 ~~~d~~~~~~-------~~~~~D~i~~~~~~~ 119 (204)
T 3e05_A 95 VEAFAPEGLD-------DLPDPDRVFIGGSGG 119 (204)
T ss_dssp EECCTTTTCT-------TSCCCSEEEESCCTT
T ss_pred EeCChhhhhh-------cCCCCCEEEECCCCc
Confidence 9999876542 126799999999865
No 57
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.21 E-value=3.9e-11 Score=115.45 Aligned_cols=77 Identities=23% Similarity=0.185 Sum_probs=68.5
Q ss_pred CCCCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCee
Q 022298 154 LRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFD 233 (299)
Q Consensus 154 ~~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fD 233 (299)
+++++|||+|||||.+++.|+..||.+|++||.++ .+ +.+++|++.+|+.++++++++|+.++. ..++||
T Consensus 82 ~~~k~VLDvG~GtGiLs~~Aa~aGA~~V~ave~s~-~~-~~a~~~~~~n~~~~~i~~i~~~~~~~~--------lpe~~D 151 (376)
T 4hc4_A 82 LRGKTVLDVGAGTGILSIFCAQAGARRVYAVEASA-IW-QQAREVVRFNGLEDRVHVLPGPVETVE--------LPEQVD 151 (376)
T ss_dssp HTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-TH-HHHHHHHHHTTCTTTEEEEESCTTTCC--------CSSCEE
T ss_pred cCCCEEEEeCCCccHHHHHHHHhCCCEEEEEeChH-HH-HHHHHHHHHcCCCceEEEEeeeeeeec--------CCcccc
Confidence 46899999999999999999999999999999997 55 899999999999999999999998752 246899
Q ss_pred EEEEcCC
Q 022298 234 YMSVTPP 240 (299)
Q Consensus 234 lI~iDPP 240 (299)
+|+.++-
T Consensus 152 vivsE~~ 158 (376)
T 4hc4_A 152 AIVSEWM 158 (376)
T ss_dssp EEECCCC
T ss_pred EEEeecc
Confidence 9998764
No 58
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.21 E-value=6.7e-11 Score=109.62 Aligned_cols=130 Identities=12% Similarity=0.090 Sum_probs=90.3
Q ss_pred ccccccceEEEEeeeeCCeEEecCCCC-CCCCCHHHHHHHHHHHHHhcCCCCCCCCCCEEEEECCccchHHHHHHHc-CC
Q 022298 101 EERTTHRLLQVLGGKARRKKLLSPKGM-DVRPMMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISR-GC 178 (299)
Q Consensus 101 ~p~~~~~~mrIi~Gk~~Gr~L~~p~~~-~~RPttd~Vrealfn~L~~~~~~~~~~~~~~VLDLfaGSGalgIEAlSr-Ga 178 (299)
.-+...+-++|+.+...|+.|.+.... .+++..-...+.+........ ..+.+|||+|||+|.++.+++++ +.
T Consensus 40 ~~~s~~q~i~v~~~~~~g~~l~ldg~~~~~~~de~~y~e~l~~~~l~~~-----~~~~~VLdiG~G~G~~~~~l~~~~~~ 114 (296)
T 1inl_A 40 SGQSDIQRIDIFENPDLGVVFALDGITMTTEKDEFMYHEMLAHVPMFLH-----PNPKKVLIIGGGDGGTLREVLKHDSV 114 (296)
T ss_dssp EEECSSCEEEEEEETTTEEEEEETTEEEEETTTHHHHHHHHHHHHHHHS-----SSCCEEEEEECTTCHHHHHHTTSTTC
T ss_pred EEECCCccEEEEEcCCCcEEEEECCEEeecccchhHHHHHHhHHHHhcC-----CCCCEEEEEcCCcCHHHHHHHhcCCC
Confidence 334445667888888778888775321 223332234455544321110 24689999999999999999887 66
Q ss_pred CEEEEEeCCHHHHHHHHHHHHHHh--CC-CCcEEEEEcchhhHHHHHhhhcCCCCCeeEEEEcCCCC
Q 022298 179 SEVHFVEMDPWVVSNVLIPNLEWT--GF-LDVSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYT 242 (299)
Q Consensus 179 ~~V~~VD~n~~Al~~~a~~N~~~~--g~-~~~~~vi~~D~~~~l~~~~~~~~~~~~fDlI~iDPPY~ 242 (299)
.+|++||+|+.++ +.+++|+..+ ++ .++++++.+|+.+++.. ..++||+|++|+|..
T Consensus 115 ~~v~~vDid~~~~-~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~------~~~~fD~Ii~d~~~~ 174 (296)
T 1inl_A 115 EKAILCEVDGLVI-EAARKYLKQTSCGFDDPRAEIVIANGAEYVRK------FKNEFDVIIIDSTDP 174 (296)
T ss_dssp SEEEEEESCHHHH-HHHHHHCHHHHGGGGCTTEEEEESCHHHHGGG------CSSCEEEEEEEC---
T ss_pred CEEEEEECCHHHH-HHHHHHhHhhccccCCCceEEEECcHHHHHhh------CCCCceEEEEcCCCc
Confidence 7899999999998 9999998652 33 35699999999887632 246899999999754
No 59
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.21 E-value=1e-10 Score=104.11 Aligned_cols=80 Identities=16% Similarity=0.205 Sum_probs=69.8
Q ss_pred CCCEEEEECCccchHHHHHHHc-C-CCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCe
Q 022298 155 RPGRWLDLYSGTGSVGIEAISR-G-CSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPF 232 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSr-G-a~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~f 232 (299)
.+.+|||+|||+|.+++.++.+ | ..+|+++|+++.++ +.+++|++.+++.++++++++|+.+.+ ..+.|
T Consensus 93 ~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~-~~a~~~~~~~~~~~~v~~~~~d~~~~~--------~~~~~ 163 (255)
T 3mb5_A 93 PGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFA-KLAWENIKWAGFDDRVTIKLKDIYEGI--------EEENV 163 (255)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHH-HHHHHHHHHHTCTTTEEEECSCGGGCC--------CCCSE
T ss_pred CCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHH-HHHHHHHHHcCCCCceEEEECchhhcc--------CCCCc
Confidence 5789999999999999998887 4 56899999999998 999999999998877999999988653 24679
Q ss_pred eEEEEcCCCCC
Q 022298 233 DYMSVTPPYTA 243 (299)
Q Consensus 233 DlI~iDPPY~~ 243 (299)
|+|++|||...
T Consensus 164 D~v~~~~~~~~ 174 (255)
T 3mb5_A 164 DHVILDLPQPE 174 (255)
T ss_dssp EEEEECSSCGG
T ss_pred CEEEECCCCHH
Confidence 99999999653
No 60
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.20 E-value=2.3e-11 Score=103.06 Aligned_cols=85 Identities=15% Similarity=0.144 Sum_probs=66.0
Q ss_pred CCCCCHHHHHHHHHHHHHhcCCCCCCCCCCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCc
Q 022298 128 DVRPMMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDV 207 (299)
Q Consensus 128 ~~RPttd~Vrealfn~L~~~~~~~~~~~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~ 207 (299)
.+||.++.+.+.+ +... ..+.+|||+|||+|.++++++.++ +|+++|+|+.++ +. .++
T Consensus 5 ~P~~~~~~l~~~l-~~~~--------~~~~~vLD~GcG~G~~~~~l~~~~--~v~gvD~s~~~~-~~----------~~~ 62 (170)
T 3q87_B 5 EPGEDTYTLMDAL-EREG--------LEMKIVLDLGTSTGVITEQLRKRN--TVVSTDLNIRAL-ES----------HRG 62 (170)
T ss_dssp CCCHHHHHHHHHH-HHHT--------CCSCEEEEETCTTCHHHHHHTTTS--EEEEEESCHHHH-HT----------CSS
T ss_pred CcCccHHHHHHHH-Hhhc--------CCCCeEEEeccCccHHHHHHHhcC--cEEEEECCHHHH-hc----------ccC
Confidence 3577777666552 3321 356799999999999999988888 899999999997 55 234
Q ss_pred EEEEEcchhhHHHHHhhhcCCCCCeeEEEEcCCCC
Q 022298 208 SSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYT 242 (299)
Q Consensus 208 ~~vi~~D~~~~l~~~~~~~~~~~~fDlI~iDPPY~ 242 (299)
++++++|+.+.+ ..++||+|++||||.
T Consensus 63 ~~~~~~d~~~~~--------~~~~fD~i~~n~~~~ 89 (170)
T 3q87_B 63 GNLVRADLLCSI--------NQESVDVVVFNPPYV 89 (170)
T ss_dssp SCEEECSTTTTB--------CGGGCSEEEECCCCB
T ss_pred CeEEECChhhhc--------ccCCCCEEEECCCCc
Confidence 778999987643 136899999999997
No 61
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.20 E-value=7.5e-11 Score=107.60 Aligned_cols=84 Identities=15% Similarity=0.197 Sum_probs=69.4
Q ss_pred CCCEEEEECCccchHHHHHHH--cCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCe
Q 022298 155 RPGRWLDLYSGTGSVGIEAIS--RGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPF 232 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlS--rGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~f 232 (299)
++.+|||+|||+|..++.++. .|..+|+++|+++.++ +.+++|++.+|+. +++++++|+.++..... ...+.|
T Consensus 83 ~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l-~~~~~~~~~~g~~-~v~~~~~D~~~~~~~~~---~~~~~f 157 (274)
T 3ajd_A 83 EDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRT-KALKSNINRMGVL-NTIIINADMRKYKDYLL---KNEIFF 157 (274)
T ss_dssp TTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHH-HHHHHHHHHTTCC-SEEEEESCHHHHHHHHH---HTTCCE
T ss_pred CcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHH-HHHHHHHHHhCCC-cEEEEeCChHhcchhhh---hccccC
Confidence 578999999999999988776 4556899999999998 9999999999986 58999999987653210 013689
Q ss_pred eEEEEcCCCCC
Q 022298 233 DYMSVTPPYTA 243 (299)
Q Consensus 233 DlI~iDPPY~~ 243 (299)
|+|++||||..
T Consensus 158 D~Vl~d~Pcs~ 168 (274)
T 3ajd_A 158 DKILLDAPCSG 168 (274)
T ss_dssp EEEEEEECCC-
T ss_pred CEEEEcCCCCC
Confidence 99999999964
No 62
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.19 E-value=2.9e-11 Score=108.78 Aligned_cols=75 Identities=16% Similarity=0.143 Sum_probs=65.0
Q ss_pred CCCEEEEECCccchHHHHHHHcC-CCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCee
Q 022298 155 RPGRWLDLYSGTGSVGIEAISRG-CSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFD 233 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSrG-a~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fD 233 (299)
++.+|||+|||||.+++.++..| +.+|+++|+|+.++ +.+++|++.+|+.++++++.+|+.+.+.. ..+||
T Consensus 15 ~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al-~~A~~N~~~~gl~~~i~~~~~d~l~~l~~-------~~~~D 86 (225)
T 3kr9_A 15 QGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPY-QSAVKNVEAHGLKEKIQVRLANGLAAFEE-------TDQVS 86 (225)
T ss_dssp TTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHH-HHHHHHHHHTTCTTTEEEEECSGGGGCCG-------GGCCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHH-HHHHHHHHHcCCCceEEEEECchhhhccc-------CcCCC
Confidence 47799999999999999999887 56899999999998 99999999999988899999998765421 12699
Q ss_pred EEEE
Q 022298 234 YMSV 237 (299)
Q Consensus 234 lI~i 237 (299)
+|++
T Consensus 87 ~Ivi 90 (225)
T 3kr9_A 87 VITI 90 (225)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8875
No 63
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.19 E-value=7.7e-11 Score=106.38 Aligned_cols=95 Identities=23% Similarity=0.224 Sum_probs=77.2
Q ss_pred CCCCCCHHHHHHHHHHHHHhcCCCCCCCCCCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCC
Q 022298 127 MDVRPMMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLD 206 (299)
Q Consensus 127 ~~~RPttd~Vrealfn~L~~~~~~~~~~~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~ 206 (299)
.++.||+..+.+.+-..+ ..+.+|||+|||+|.+++.++.+|+ +|+++|+|+.++ +.+++|++.+++.
T Consensus 101 tg~~~tt~~~~~~l~~~~---------~~~~~VLDiGcG~G~l~~~la~~g~-~v~gvDi~~~~v-~~a~~n~~~~~~~- 168 (254)
T 2nxc_A 101 TGHHETTRLALKALARHL---------RPGDKVLDLGTGSGVLAIAAEKLGG-KALGVDIDPMVL-PQAEANAKRNGVR- 168 (254)
T ss_dssp -CCSHHHHHHHHHHHHHC---------CTTCEEEEETCTTSHHHHHHHHTTC-EEEEEESCGGGH-HHHHHHHHHTTCC-
T ss_pred CCCCHHHHHHHHHHHHhc---------CCCCEEEEecCCCcHHHHHHHHhCC-eEEEEECCHHHH-HHHHHHHHHcCCc-
Confidence 346788777766654332 2478999999999999999988998 899999999998 9999999999875
Q ss_pred cEEEEEcchhhHHHHHhhhcCCCCCeeEEEEcCCCC
Q 022298 207 VSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYT 242 (299)
Q Consensus 207 ~~~vi~~D~~~~l~~~~~~~~~~~~fDlI~iDPPY~ 242 (299)
++++++|+.+.+. .++||+|++|+++.
T Consensus 169 -v~~~~~d~~~~~~--------~~~fD~Vv~n~~~~ 195 (254)
T 2nxc_A 169 -PRFLEGSLEAALP--------FGPFDLLVANLYAE 195 (254)
T ss_dssp -CEEEESCHHHHGG--------GCCEEEEEEECCHH
T ss_pred -EEEEECChhhcCc--------CCCCCEEEECCcHH
Confidence 7889999877431 36899999998764
No 64
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.19 E-value=1.4e-10 Score=108.15 Aligned_cols=130 Identities=18% Similarity=0.165 Sum_probs=90.5
Q ss_pred ccccccccceEEEEeeeeCCeEEecCCCCCCCCCHH---HHHHHHHHHHHhcCCCCCCCCCCEEEEECCccchHHHHHHH
Q 022298 99 SQEERTTHRLLQVLGGKARRKKLLSPKGMDVRPMME---VVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAIS 175 (299)
Q Consensus 99 ~~~p~~~~~~mrIi~Gk~~Gr~L~~p~~~~~RPttd---~Vrealfn~L~~~~~~~~~~~~~~VLDLfaGSGalgIEAlS 175 (299)
.+.-+...+-++|+.+...|+.|.... .+++++ ..-..++..+.... ...+.+|||+|||+|.+++++++
T Consensus 43 l~~~~s~~q~i~v~~~~~~g~~L~ldg---~~~~~~~de~~y~e~l~~~~l~~----~~~~~~VLdiG~G~G~~~~~l~~ 115 (304)
T 2o07_A 43 LHHRRSRYQDILVFRSKTYGNVLVLDG---VIQCTERDEFSYQEMIANLPLCS----HPNPRKVLIIGGGDGGVLREVVK 115 (304)
T ss_dssp EEEEECSSSEEEEEEESSSCEEEEETT---EEEEETTTHHHHHHHHHHHHHTT----SSSCCEEEEEECTTSHHHHHHTT
T ss_pred EEEEECCCcEEEEEEcCCCceEEEECC---EEEeecccchHHHHHHHHHHHhh----CCCCCEEEEECCCchHHHHHHHH
Confidence 344444556788889888899888752 222222 12111222221110 12468999999999999999988
Q ss_pred cC-CCEEEEEeCCHHHHHHHHHHHHHH--hCC-CCcEEEEEcchhhHHHHHhhhcCCCCCeeEEEEcCCCC
Q 022298 176 RG-CSEVHFVEMDPWVVSNVLIPNLEW--TGF-LDVSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYT 242 (299)
Q Consensus 176 rG-a~~V~~VD~n~~Al~~~a~~N~~~--~g~-~~~~~vi~~D~~~~l~~~~~~~~~~~~fDlI~iDPPY~ 242 (299)
++ ..+|++||+|+.++ +.+++|+.. .++ .++++++.+|+.+++.. ..++||+|++|+|..
T Consensus 116 ~~~~~~v~~vDid~~~i-~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~------~~~~fD~Ii~d~~~~ 179 (304)
T 2o07_A 116 HPSVESVVQCEIDEDVI-QVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQ------NQDAFDVIITDSSDP 179 (304)
T ss_dssp CTTCCEEEEEESCHHHH-HHHHHHCHHHHGGGGCTTEEEEESCHHHHHHT------CSSCEEEEEEECC--
T ss_pred cCCCCEEEEEECCHHHH-HHHHHHhHHhhcccCCCcEEEEECcHHHHHhh------CCCCceEEEECCCCC
Confidence 74 57899999999998 999999876 344 35699999999987643 246899999999864
No 65
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.19 E-value=6.7e-11 Score=112.73 Aligned_cols=81 Identities=17% Similarity=0.174 Sum_probs=69.0
Q ss_pred CCCCEEEEECCccchHHHHHHHcCC-CEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCe
Q 022298 154 LRPGRWLDLYSGTGSVGIEAISRGC-SEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPF 232 (299)
Q Consensus 154 ~~~~~VLDLfaGSGalgIEAlSrGa-~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~f 232 (299)
..+.+|||+| |+|.++++++.+|. .+|+++|+|+.++ +.+++|++.+|+. +++++++|+.+.+.. ...+.|
T Consensus 171 ~~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l-~~a~~~~~~~g~~-~v~~~~~D~~~~l~~-----~~~~~f 242 (373)
T 2qm3_A 171 LENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLT-KFIEKAANEIGYE-DIEIFTFDLRKPLPD-----YALHKF 242 (373)
T ss_dssp STTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHH-HHHHHHHHHHTCC-CEEEECCCTTSCCCT-----TTSSCB
T ss_pred CCCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHH-HHHHHHHHHcCCC-CEEEEEChhhhhchh-----hccCCc
Confidence 3578999999 99999999988876 6899999999998 9999999999986 699999999874311 013579
Q ss_pred eEEEEcCCCC
Q 022298 233 DYMSVTPPYT 242 (299)
Q Consensus 233 DlI~iDPPY~ 242 (299)
|+|++||||.
T Consensus 243 D~Vi~~~p~~ 252 (373)
T 2qm3_A 243 DTFITDPPET 252 (373)
T ss_dssp SEEEECCCSS
T ss_pred cEEEECCCCc
Confidence 9999999995
No 66
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.18 E-value=7.7e-11 Score=116.04 Aligned_cols=80 Identities=20% Similarity=0.264 Sum_probs=69.3
Q ss_pred CCCEEEEECCccchHHHHHHHc--CCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCe
Q 022298 155 RPGRWLDLYSGTGSVGIEAISR--GCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPF 232 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSr--Ga~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~f 232 (299)
.+.+|||+|||+|..++.++++ +..+|+++|+++.++ +.+++|++.+|+.+ +.++++|+.++.... .+.|
T Consensus 105 ~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl-~~~~~n~~r~g~~n-v~v~~~Da~~l~~~~------~~~F 176 (456)
T 3m4x_A 105 PGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRA-KILSENIERWGVSN-AIVTNHAPAELVPHF------SGFF 176 (456)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHH-HHHHHHHHHHTCSS-EEEECCCHHHHHHHH------TTCE
T ss_pred CCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHH-HHHHHHHHHcCCCc-eEEEeCCHHHhhhhc------cccC
Confidence 5789999999999999988764 445899999999998 99999999999975 889999998875433 3689
Q ss_pred eEEEEcCCCC
Q 022298 233 DYMSVTPPYT 242 (299)
Q Consensus 233 DlI~iDPPY~ 242 (299)
|+|++||||.
T Consensus 177 D~Il~DaPCS 186 (456)
T 3m4x_A 177 DRIVVDAPCS 186 (456)
T ss_dssp EEEEEECCCC
T ss_pred CEEEECCCCC
Confidence 9999999974
No 67
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.17 E-value=3.9e-11 Score=109.19 Aligned_cols=75 Identities=13% Similarity=0.058 Sum_probs=65.2
Q ss_pred CCCEEEEECCccchHHHHHHHcC-CCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCee
Q 022298 155 RPGRWLDLYSGTGSVGIEAISRG-CSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFD 233 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSrG-a~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fD 233 (299)
.+.+|||+|||+|.+++.++..| +.+|+++|+|+.++ +.+++|++.+|+.++++++++|+.+.+. ...+||
T Consensus 21 ~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al-~~A~~N~~~~gl~~~I~v~~gD~l~~~~-------~~~~~D 92 (244)
T 3gnl_A 21 KNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPF-QSAQKQVRSSGLTEQIDVRKGNGLAVIE-------KKDAID 92 (244)
T ss_dssp SSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHH-HHHHHHHHHTTCTTTEEEEECSGGGGCC-------GGGCCC
T ss_pred CCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHH-HHHHHHHHHcCCCceEEEEecchhhccC-------cccccc
Confidence 57899999999999999998887 56899999999998 9999999999998889999999887642 123599
Q ss_pred EEEE
Q 022298 234 YMSV 237 (299)
Q Consensus 234 lI~i 237 (299)
+|++
T Consensus 93 ~Ivi 96 (244)
T 3gnl_A 93 TIVI 96 (244)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8875
No 68
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.17 E-value=4.1e-11 Score=108.16 Aligned_cols=75 Identities=16% Similarity=0.152 Sum_probs=65.4
Q ss_pred CCCEEEEECCccchHHHHHHHcC-CCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCee
Q 022298 155 RPGRWLDLYSGTGSVGIEAISRG-CSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFD 233 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSrG-a~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fD 233 (299)
++.+|||+|||||.+++.++.+| +.+|+++|+|+.++ +.+++|++.+|+.++++++++|+.+.+. ...+||
T Consensus 21 ~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al-~~A~~N~~~~gl~~~I~~~~gD~l~~~~-------~~~~~D 92 (230)
T 3lec_A 21 KGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPY-QSALKNVSEHGLTSKIDVRLANGLSAFE-------EADNID 92 (230)
T ss_dssp TTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHH-HHHHHHHHHTTCTTTEEEEECSGGGGCC-------GGGCCC
T ss_pred CCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHH-HHHHHHHHHcCCCCcEEEEECchhhccc-------cccccC
Confidence 57899999999999999998887 56899999999998 9999999999999889999999887642 123699
Q ss_pred EEEE
Q 022298 234 YMSV 237 (299)
Q Consensus 234 lI~i 237 (299)
+|++
T Consensus 93 ~Ivi 96 (230)
T 3lec_A 93 TITI 96 (230)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8874
No 69
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.16 E-value=2e-10 Score=107.84 Aligned_cols=123 Identities=15% Similarity=0.134 Sum_probs=87.8
Q ss_pred ccceEEEEeeeeCCeEEecCCC-CCCCCCHHHHHHHHHHH-HHhcCCCCCCCCCCEEEEECCccchHHHHHHHc-CCCEE
Q 022298 105 THRLLQVLGGKARRKKLLSPKG-MDVRPMMEVVKGAAFDI-LQSAGGCPASLRPGRWLDLYSGTGSVGIEAISR-GCSEV 181 (299)
Q Consensus 105 ~~~~mrIi~Gk~~Gr~L~~p~~-~~~RPttd~Vrealfn~-L~~~~~~~~~~~~~~VLDLfaGSGalgIEAlSr-Ga~~V 181 (299)
..+-++++...+.|+.|.+... ..+++..-...|.+... +... ..+.+|||+|||+|.++++++.+ +..+|
T Consensus 70 ~~q~i~v~~~~~~g~~l~ldg~~~~~~~de~~y~e~l~~~~l~~~------~~~~~VLdiG~G~G~~~~~l~~~~~~~~v 143 (321)
T 2pt6_A 70 KYQNVLVFESTTYGKVLVLDGVIQLTEKDEFAYHEMMTHVPMTVS------KEPKNVLVVGGGDGGIIRELCKYKSVENI 143 (321)
T ss_dssp SSCEEEEEEESSSCEEEEETTEEEEETTTHHHHHHHHHHHHHHHS------SSCCEEEEEECTTCHHHHHHTTCTTCCEE
T ss_pred CCceEEEEEcCCCcEEEEECCEeeeCcccchHHHHHHHHHHHhcC------CCCCEEEEEcCCccHHHHHHHHcCCCCEE
Confidence 3445667777777888876432 12344422334444332 1111 24689999999999999998876 56789
Q ss_pred EEEeCCHHHHHHHHHHHHHHh--CC-CCcEEEEEcchhhHHHHHhhhcCCCCCeeEEEEcCC
Q 022298 182 HFVEMDPWVVSNVLIPNLEWT--GF-LDVSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPP 240 (299)
Q Consensus 182 ~~VD~n~~Al~~~a~~N~~~~--g~-~~~~~vi~~D~~~~l~~~~~~~~~~~~fDlI~iDPP 240 (299)
++||+|+.++ +.+++|+..+ ++ .++++++++|+.+++... .++||+|++|++
T Consensus 144 ~~vDis~~~l-~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~------~~~fDvIi~d~~ 198 (321)
T 2pt6_A 144 DICEIDETVI-EVSKIYFKNISCGYEDKRVNVFIEDASKFLENV------TNTYDVIIVDSS 198 (321)
T ss_dssp EEEESCHHHH-HHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHC------CSCEEEEEEECC
T ss_pred EEEECCHHHH-HHHHHHHHhhccccCCCcEEEEEccHHHHHhhc------CCCceEEEECCc
Confidence 9999999998 9999998762 33 356999999999876532 468999999994
No 70
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.16 E-value=2.2e-10 Score=99.84 Aligned_cols=86 Identities=13% Similarity=0.096 Sum_probs=70.5
Q ss_pred CCCEEEEECCccchHHHHHHHc--CCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCe
Q 022298 155 RPGRWLDLYSGTGSVGIEAISR--GCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPF 232 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSr--Ga~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~f 232 (299)
.+.+|||+|||+|..++.++.+ +..+|+++|+++.++ +.+++|++..++.++++++++|+.+.+..... ....++|
T Consensus 64 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~-~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~-~~~~~~f 141 (225)
T 3tr6_A 64 QAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKST-ALAKEYWEKAGLSDKIGLRLSPAKDTLAELIH-AGQAWQY 141 (225)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHH-HHHHHHHHHTTCTTTEEEEESCHHHHHHHHHT-TTCTTCE
T ss_pred CCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHH-HHHHHHHHHCCCCCceEEEeCCHHHHHHHhhh-ccCCCCc
Confidence 4679999999999999988775 245899999999998 99999999999988899999999887654320 0001689
Q ss_pred eEEEEcCCCC
Q 022298 233 DYMSVTPPYT 242 (299)
Q Consensus 233 DlI~iDPPY~ 242 (299)
|+||+|++..
T Consensus 142 D~v~~~~~~~ 151 (225)
T 3tr6_A 142 DLIYIDADKA 151 (225)
T ss_dssp EEEEECSCGG
T ss_pred cEEEECCCHH
Confidence 9999999843
No 71
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.15 E-value=9.7e-11 Score=115.54 Aligned_cols=79 Identities=22% Similarity=0.190 Sum_probs=68.5
Q ss_pred CCCEEEEECCccchHHHHHHHc--CCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCe
Q 022298 155 RPGRWLDLYSGTGSVGIEAISR--GCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPF 232 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSr--Ga~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~f 232 (299)
++.+|||+|||+|..++.++++ +..+|+++|+|+.++ +.+++|++.+|+. +.++++|+.++.... .+.|
T Consensus 101 ~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l-~~a~~n~~r~G~~--v~~~~~Da~~l~~~~------~~~F 171 (464)
T 3m6w_A 101 PGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRV-RGLLENVERWGAP--LAVTQAPPRALAEAF------GTYF 171 (464)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHH-HHHHHHHHHHCCC--CEEECSCHHHHHHHH------CSCE
T ss_pred CCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHH-HHHHHHHHHcCCe--EEEEECCHHHhhhhc------cccC
Confidence 5789999999999999998865 335899999999998 9999999999985 789999998875432 3689
Q ss_pred eEEEEcCCCC
Q 022298 233 DYMSVTPPYT 242 (299)
Q Consensus 233 DlI~iDPPY~ 242 (299)
|+|++||||.
T Consensus 172 D~Il~D~PcS 181 (464)
T 3m6w_A 172 HRVLLDAPCS 181 (464)
T ss_dssp EEEEEECCCC
T ss_pred CEEEECCCcC
Confidence 9999999994
No 72
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.15 E-value=4.1e-10 Score=99.81 Aligned_cols=81 Identities=15% Similarity=0.097 Sum_probs=69.7
Q ss_pred CCCEEEEECCccchHHHHHHHcC-CCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHH-HHhhhcCCCCCe
Q 022298 155 RPGRWLDLYSGTGSVGIEAISRG-CSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLE-RAEQFVGKDGPF 232 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSrG-a~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~-~~~~~~~~~~~f 232 (299)
.+.+|||+|||+|..++.++..+ ..+|++||+++.++ +.+++|++..++.++++++.+|+.+.+. .. .++|
T Consensus 71 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~-~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~------~~~f 143 (232)
T 3ntv_A 71 NVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMI-QYAKQNLATYHFENQVRIIEGNALEQFENVN------DKVY 143 (232)
T ss_dssp TCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHH-HHHHHHHHHTTCTTTEEEEESCGGGCHHHHT------TSCE
T ss_pred CCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHH-HHHHHHHHHcCCCCcEEEEECCHHHHHHhhc------cCCc
Confidence 47899999999999999877732 45899999999998 9999999999987789999999988765 32 3689
Q ss_pred eEEEEcCCCC
Q 022298 233 DYMSVTPPYT 242 (299)
Q Consensus 233 DlI~iDPPY~ 242 (299)
|+||+|.+..
T Consensus 144 D~V~~~~~~~ 153 (232)
T 3ntv_A 144 DMIFIDAAKA 153 (232)
T ss_dssp EEEEEETTSS
T ss_pred cEEEEcCcHH
Confidence 9999998754
No 73
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.15 E-value=1.6e-10 Score=110.46 Aligned_cols=79 Identities=16% Similarity=0.118 Sum_probs=70.0
Q ss_pred CCCCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCee
Q 022298 154 LRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFD 233 (299)
Q Consensus 154 ~~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fD 233 (299)
..+.+|||+|||+|.+++.++.+|+.+|++||++ .++ +.+++|++.+++.++++++++|+.++. ..++||
T Consensus 62 ~~~~~VLDlGcGtG~ls~~la~~g~~~V~gvD~s-~~~-~~a~~~~~~~~~~~~v~~~~~d~~~~~--------~~~~~D 131 (376)
T 3r0q_C 62 FEGKTVLDVGTGSGILAIWSAQAGARKVYAVEAT-KMA-DHARALVKANNLDHIVEVIEGSVEDIS--------LPEKVD 131 (376)
T ss_dssp TTTCEEEEESCTTTHHHHHHHHTTCSEEEEEESS-TTH-HHHHHHHHHTTCTTTEEEEESCGGGCC--------CSSCEE
T ss_pred CCCCEEEEeccCcCHHHHHHHhcCCCEEEEEccH-HHH-HHHHHHHHHcCCCCeEEEEECchhhcC--------cCCcce
Confidence 4688999999999999999999999899999999 888 999999999999888999999998753 126899
Q ss_pred EEEEcC-CCC
Q 022298 234 YMSVTP-PYT 242 (299)
Q Consensus 234 lI~iDP-PY~ 242 (299)
+|++++ +|.
T Consensus 132 ~Iv~~~~~~~ 141 (376)
T 3r0q_C 132 VIISEWMGYF 141 (376)
T ss_dssp EEEECCCBTT
T ss_pred EEEEcChhhc
Confidence 999998 444
No 74
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.15 E-value=8.1e-11 Score=110.71 Aligned_cols=108 Identities=17% Similarity=0.242 Sum_probs=87.9
Q ss_pred CCeEEecCCCCCCCCCHHHHHHHHHHHHHhcCCCCCCCCCCEEEEECCccchHHHHHHHcCC-CEEEEEeCCHHHHHHHH
Q 022298 117 RRKKLLSPKGMDVRPMMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGC-SEVHFVEMDPWVVSNVL 195 (299)
Q Consensus 117 ~Gr~L~~p~~~~~RPttd~Vrealfn~L~~~~~~~~~~~~~~VLDLfaGSGalgIEAlSrGa-~~V~~VD~n~~Al~~~a 195 (299)
.+..+....+...++..+...+.+.+.+.. ..+.+|||+|||+|.+++.++.++. .+|+++|+|+.++ +.+
T Consensus 165 ~~~~~~~~~gvf~~~~~d~~~~~ll~~l~~-------~~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l-~~a 236 (343)
T 2pjd_A 165 DGLTVKTLPGVFSRDGLDVGSQLLLSTLTP-------HTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAV-EAS 236 (343)
T ss_dssp TTEEEEECTTCTTSSSCCHHHHHHHHHSCT-------TCCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHH-HHH
T ss_pred cceEEEecCCccCCCCCcHHHHHHHHhcCc-------CCCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHH-HHH
Confidence 355666777777788888888888877743 2367999999999999999988874 3799999999998 999
Q ss_pred HHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCeeEEEEcCCCCC
Q 022298 196 IPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTA 243 (299)
Q Consensus 196 ~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fDlI~iDPPY~~ 243 (299)
++|++.++.. .+++.+|+.++. .++||+|+++|||..
T Consensus 237 ~~~~~~~~~~--~~~~~~d~~~~~---------~~~fD~Iv~~~~~~~ 273 (343)
T 2pjd_A 237 RATLAANGVE--GEVFASNVFSEV---------KGRFDMIISNPPFHD 273 (343)
T ss_dssp HHHHHHTTCC--CEEEECSTTTTC---------CSCEEEEEECCCCCS
T ss_pred HHHHHHhCCC--CEEEEccccccc---------cCCeeEEEECCCccc
Confidence 9999998875 457889987642 368999999999975
No 75
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.14 E-value=1.7e-10 Score=96.28 Aligned_cols=99 Identities=16% Similarity=0.097 Sum_probs=78.4
Q ss_pred CCCHHHHHHHHHHHHHhcCCCCCCCCCCEEEEECCccchHHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcE
Q 022298 130 RPMMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISR-GCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVS 208 (299)
Q Consensus 130 RPttd~Vrealfn~L~~~~~~~~~~~~~~VLDLfaGSGalgIEAlSr-Ga~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~ 208 (299)
..|.+.++..+++.+.. .++.+|||+|||+|.+++.++.+ +..+|+++|+|+.++ +.+++|++.+++.+++
T Consensus 7 ~~t~~~~~~~~~~~~~~-------~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~-~~a~~~~~~~~~~~~~ 78 (178)
T 3hm2_A 7 QLTKQHVRALAISALAP-------KPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERR-ERILSNAINLGVSDRI 78 (178)
T ss_dssp CSHHHHHHHHHHHHHCC-------CTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHH-HHHHHHHHTTTCTTSE
T ss_pred cccHHHHHHHHHHHhcc-------cCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHH-HHHHHHHHHhCCCCCE
Confidence 45667788888777753 35779999999999999998876 345799999999998 9999999999987568
Q ss_pred EEEEcchhhHHHHHhhhcCCCCCeeEEEEcCCCCC
Q 022298 209 SIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTA 243 (299)
Q Consensus 209 ~vi~~D~~~~l~~~~~~~~~~~~fDlI~iDPPY~~ 243 (299)
++++|+.+.+.. ..+.||+|+++.+...
T Consensus 79 -~~~~d~~~~~~~------~~~~~D~i~~~~~~~~ 106 (178)
T 3hm2_A 79 -AVQQGAPRAFDD------VPDNPDVIFIGGGLTA 106 (178)
T ss_dssp -EEECCTTGGGGG------CCSCCSEEEECC-TTC
T ss_pred -EEecchHhhhhc------cCCCCCEEEECCcccH
Confidence 888988664421 1268999999998764
No 76
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.14 E-value=3e-10 Score=99.51 Aligned_cols=86 Identities=13% Similarity=0.129 Sum_probs=68.9
Q ss_pred CCCEEEEECCccchHHHHHHHc--CCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCe
Q 022298 155 RPGRWLDLYSGTGSVGIEAISR--GCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPF 232 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSr--Ga~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~f 232 (299)
.+.+|||+|||+|..++.++.. ...+|++||+++.++ +.+++|++.+++.++++++++|+.+++..... ....++|
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~-~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~-~~~~~~f 135 (221)
T 3u81_A 58 SPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCA-AITQQMLNFAGLQDKVTILNGASQDLIPQLKK-KYDVDTL 135 (221)
T ss_dssp CCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHH-HHHHHHHHHHTCGGGEEEEESCHHHHGGGTTT-TSCCCCC
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHH-HHHHHHHHHcCCCCceEEEECCHHHHHHHHHH-hcCCCce
Confidence 4689999999999999988763 234799999999998 99999999999987899999999887643210 0001589
Q ss_pred eEEEEcCCCC
Q 022298 233 DYMSVTPPYT 242 (299)
Q Consensus 233 DlI~iDPPY~ 242 (299)
|+||+|.+..
T Consensus 136 D~V~~d~~~~ 145 (221)
T 3u81_A 136 DMVFLDHWKD 145 (221)
T ss_dssp SEEEECSCGG
T ss_pred EEEEEcCCcc
Confidence 9999998643
No 77
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.13 E-value=2.3e-10 Score=101.49 Aligned_cols=82 Identities=7% Similarity=0.067 Sum_probs=68.7
Q ss_pred CCEEEEECCccchHHHHHHHc-C-CCEEEEEeCCHHHHHHHHHHHHHHhCCC-CcEEEEEcchhhHHHHHhhhcCCCCCe
Q 022298 156 PGRWLDLYSGTGSVGIEAISR-G-CSEVHFVEMDPWVVSNVLIPNLEWTGFL-DVSSIHTVRVETFLERAEQFVGKDGPF 232 (299)
Q Consensus 156 ~~~VLDLfaGSGalgIEAlSr-G-a~~V~~VD~n~~Al~~~a~~N~~~~g~~-~~~~vi~~D~~~~l~~~~~~~~~~~~f 232 (299)
+.+|||+|||+|..++.++.. + ..+|++||+|+.++ +.+++|++.+++. ++++++++|+.+++... ..++|
T Consensus 57 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~-~~a~~~~~~~g~~~~~i~~~~gda~~~l~~~-----~~~~f 130 (221)
T 3dr5_A 57 STGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQ-RQAKALFREAGYSPSRVRFLLSRPLDVMSRL-----ANDSY 130 (221)
T ss_dssp CCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHH-HHHHHHHHHTTCCGGGEEEECSCHHHHGGGS-----CTTCE
T ss_pred CCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHH-HHHHHHHHHcCCCcCcEEEEEcCHHHHHHHh-----cCCCc
Confidence 349999999999999987763 2 35799999999998 9999999999997 78999999998876432 14689
Q ss_pred eEEEEcCCCCC
Q 022298 233 DYMSVTPPYTA 243 (299)
Q Consensus 233 DlI~iDPPY~~ 243 (299)
|+||+|.+...
T Consensus 131 D~V~~d~~~~~ 141 (221)
T 3dr5_A 131 QLVFGQVSPMD 141 (221)
T ss_dssp EEEEECCCTTT
T ss_pred CeEEEcCcHHH
Confidence 99999987543
No 78
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=99.13 E-value=1.7e-10 Score=108.05 Aligned_cols=83 Identities=8% Similarity=0.100 Sum_probs=68.2
Q ss_pred CCCEEEEECCccchHHHHHHHc--CCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCe
Q 022298 155 RPGRWLDLYSGTGSVGIEAISR--GCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPF 232 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSr--Ga~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~f 232 (299)
++.+|||+|||+|..++.++.. +..+|+++|+++.++ +.+++|++.+|+.+ ++++++|+.++.... .....|
T Consensus 102 ~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l-~~~~~n~~r~g~~~-v~~~~~D~~~~~~~~----~~~~~f 175 (309)
T 2b9e_A 102 PGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRL-ASMATLLARAGVSC-CELAEEDFLAVSPSD----PRYHEV 175 (309)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHH-HHHHHHHHHTTCCS-EEEEECCGGGSCTTC----GGGTTE
T ss_pred CCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHH-HHHHHHHHHcCCCe-EEEEeCChHhcCccc----cccCCC
Confidence 5789999999999999988763 456899999999998 99999999999864 899999987753210 001479
Q ss_pred eEEEEcCCCCC
Q 022298 233 DYMSVTPPYTA 243 (299)
Q Consensus 233 DlI~iDPPY~~ 243 (299)
|.|++||||..
T Consensus 176 D~Vl~D~PcSg 186 (309)
T 2b9e_A 176 HYILLDPSCSG 186 (309)
T ss_dssp EEEEECCCCCC
T ss_pred CEEEEcCCcCC
Confidence 99999999964
No 79
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.12 E-value=8.1e-10 Score=96.31 Aligned_cols=85 Identities=18% Similarity=0.136 Sum_probs=69.9
Q ss_pred CCCEEEEECCccchHHHHHHHc-C-CCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCe
Q 022298 155 RPGRWLDLYSGTGSVGIEAISR-G-CSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPF 232 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSr-G-a~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~f 232 (299)
.+.+|||+|||+|..++.++.+ + ..+|+++|+++.++ +.+++|++..++.++++++++|+.+.+.... ....+.|
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~-~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~--~~~~~~f 134 (223)
T 3duw_A 58 GARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHA-DIARSNIERANLNDRVEVRTGLALDSLQQIE--NEKYEPF 134 (223)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHH-HHHHHHHHHTTCTTTEEEEESCHHHHHHHHH--HTTCCCC
T ss_pred CCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHH-HHHHHHHHHcCCCCcEEEEEcCHHHHHHHHH--hcCCCCc
Confidence 4789999999999999988776 1 34799999999998 9999999999998889999999988765432 0112579
Q ss_pred eEEEEcCCCC
Q 022298 233 DYMSVTPPYT 242 (299)
Q Consensus 233 DlI~iDPPY~ 242 (299)
|+||+|++..
T Consensus 135 D~v~~d~~~~ 144 (223)
T 3duw_A 135 DFIFIDADKQ 144 (223)
T ss_dssp SEEEECSCGG
T ss_pred CEEEEcCCcH
Confidence 9999999844
No 80
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=99.11 E-value=2.5e-10 Score=106.68 Aligned_cols=84 Identities=13% Similarity=0.031 Sum_probs=68.1
Q ss_pred CCCEEEEECCccchHHHHHHHcC-CCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCee
Q 022298 155 RPGRWLDLYSGTGSVGIEAISRG-CSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFD 233 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSrG-a~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fD 233 (299)
++.+|||+|||+|.++++++.+. ..+|+++|+|+.++ +.+++|++.++ ++++++++|+.++...+..+ ...+||
T Consensus 26 ~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al-~~A~~~~~~~g--~~v~~v~~d~~~l~~~l~~~--g~~~~D 100 (301)
T 1m6y_A 26 DEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVL-RIAEEKLKEFS--DRVSLFKVSYREADFLLKTL--GIEKVD 100 (301)
T ss_dssp TTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHH-HHHHHHTGGGT--TTEEEEECCGGGHHHHHHHT--TCSCEE
T ss_pred CCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHH-HHHHHHHHhcC--CcEEEEECCHHHHHHHHHhc--CCCCCC
Confidence 57899999999999999998873 45899999999998 99999999887 46999999987753222100 115799
Q ss_pred EEEEcCCCCC
Q 022298 234 YMSVTPPYTA 243 (299)
Q Consensus 234 lI~iDPPY~~ 243 (299)
.|++|||+..
T Consensus 101 ~Vl~D~gvSs 110 (301)
T 1m6y_A 101 GILMDLGVST 110 (301)
T ss_dssp EEEEECSCCH
T ss_pred EEEEcCccch
Confidence 9999999863
No 81
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.11 E-value=5e-10 Score=104.86 Aligned_cols=91 Identities=19% Similarity=0.136 Sum_probs=74.7
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcc
Q 022298 135 VVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVR 214 (299)
Q Consensus 135 ~Vrealfn~L~~~~~~~~~~~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D 214 (299)
..++++...+.. .++.+|||+|||+|.+++.++.+|+.+|++||++ .++ +.+++|++.+++.++++++++|
T Consensus 25 ~y~~ai~~~~~~-------~~~~~VLDiGcGtG~ls~~la~~g~~~v~~vD~s-~~~-~~a~~~~~~~~~~~~i~~~~~d 95 (328)
T 1g6q_1 25 SYRNAIIQNKDL-------FKDKIVLDVGCGTGILSMFAAKHGAKHVIGVDMS-SII-EMAKELVELNGFSDKITLLRGK 95 (328)
T ss_dssp HHHHHHHHHHHH-------HTTCEEEEETCTTSHHHHHHHHTCCSEEEEEESS-THH-HHHHHHHHHTTCTTTEEEEESC
T ss_pred HHHHHHHhhHhh-------cCCCEEEEecCccHHHHHHHHHCCCCEEEEEChH-HHH-HHHHHHHHHcCCCCCEEEEECc
Confidence 355566555443 2578999999999999999999998899999999 577 8999999999998889999999
Q ss_pred hhhHHHHHhhhcCCCCCeeEEEEcCCC
Q 022298 215 VETFLERAEQFVGKDGPFDYMSVTPPY 241 (299)
Q Consensus 215 ~~~~l~~~~~~~~~~~~fDlI~iDPPY 241 (299)
+.++. ...++||+|+++++.
T Consensus 96 ~~~~~-------~~~~~~D~Ivs~~~~ 115 (328)
T 1g6q_1 96 LEDVH-------LPFPKVDIIISEWMG 115 (328)
T ss_dssp TTTSC-------CSSSCEEEEEECCCB
T ss_pred hhhcc-------CCCCcccEEEEeCch
Confidence 87642 123689999999884
No 82
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.11 E-value=5e-10 Score=105.58 Aligned_cols=81 Identities=16% Similarity=0.136 Sum_probs=69.4
Q ss_pred CCCCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCee
Q 022298 154 LRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFD 233 (299)
Q Consensus 154 ~~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fD 233 (299)
.++.+|||+|||+|.+++.++.+|+.+|++||+++ ++ +.+++|++.+++.++++++++|+.++. ...++||
T Consensus 63 ~~~~~VLDiGcGtG~ls~~la~~g~~~v~gvD~s~-~~-~~a~~~~~~~~~~~~i~~~~~d~~~~~-------~~~~~~D 133 (340)
T 2fyt_A 63 FKDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSE-IL-YQAMDIIRLNKLEDTITLIKGKIEEVH-------LPVEKVD 133 (340)
T ss_dssp TTTCEEEEETCTTSHHHHHHHHTTCSEEEEEESST-HH-HHHHHHHHHTTCTTTEEEEESCTTTSC-------CSCSCEE
T ss_pred cCCCEEEEeeccCcHHHHHHHHcCCCEEEEEChHH-HH-HHHHHHHHHcCCCCcEEEEEeeHHHhc-------CCCCcEE
Confidence 35789999999999999999999988999999996 87 999999999998778999999987641 1236899
Q ss_pred EEEEcC-CCCC
Q 022298 234 YMSVTP-PYTA 243 (299)
Q Consensus 234 lI~iDP-PY~~ 243 (299)
+|++++ +|..
T Consensus 134 ~Ivs~~~~~~l 144 (340)
T 2fyt_A 134 VIISEWMGYFL 144 (340)
T ss_dssp EEEECCCBTTB
T ss_pred EEEEcCchhhc
Confidence 999998 5654
No 83
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.10 E-value=3.1e-10 Score=103.82 Aligned_cols=105 Identities=14% Similarity=0.067 Sum_probs=70.7
Q ss_pred CCCHHHHHHHHHHHHHhcCCCCCCCCCCEEEEECCccchHHHHHHHcCCCEEEEEeC-CHHHHHHHHHHHH-----HHhC
Q 022298 130 RPMMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEM-DPWVVSNVLIPNL-----EWTG 203 (299)
Q Consensus 130 RPttd~Vrealfn~L~~~~~~~~~~~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~-n~~Al~~~a~~N~-----~~~g 203 (299)
.|.+..+.+.+...... ..+.+|||+|||+|.+++.++.+|+.+|+++|+ ++.++ +.+++|+ +.++
T Consensus 61 ~~~~~~l~~~l~~~~~~-------~~~~~vLDlG~G~G~~~~~~a~~~~~~v~~~D~s~~~~~-~~a~~n~~~N~~~~~~ 132 (281)
T 3bzb_A 61 WSGARALADTLCWQPEL-------IAGKTVCELGAGAGLVSIVAFLAGADQVVATDYPDPEIL-NSLESNIREHTANSCS 132 (281)
T ss_dssp -CHHHHHHHHHHHCGGG-------TTTCEEEETTCTTSHHHHHHHHTTCSEEEEEECSCHHHH-HHHHHHHHTTCC----
T ss_pred ecHHHHHHHHHHhcchh-------cCCCeEEEecccccHHHHHHHHcCCCEEEEEeCCCHHHH-HHHHHHHHHhhhhhcc
Confidence 46666666666554332 357899999999999999988888878999999 89998 9999999 5555
Q ss_pred CC----CcEEEEEcchhhHHHHHhhhcCCCCCeeEEEE-cCCCCC
Q 022298 204 FL----DVSSIHTVRVETFLERAEQFVGKDGPFDYMSV-TPPYTA 243 (299)
Q Consensus 204 ~~----~~~~vi~~D~~~~l~~~~~~~~~~~~fDlI~i-DPPY~~ 243 (299)
+. +++++...|..+......... ..++||+|++ |..|..
T Consensus 133 ~~~~~~~~v~~~~~~~~~~~~~~~~~~-~~~~fD~Ii~~dvl~~~ 176 (281)
T 3bzb_A 133 SETVKRASPKVVPYRWGDSPDSLQRCT-GLQRFQVVLLADLLSFH 176 (281)
T ss_dssp ------CCCEEEECCTTSCTHHHHHHH-SCSSBSEEEEESCCSCG
T ss_pred cccCCCCCeEEEEecCCCccHHHHhhc-cCCCCCEEEEeCcccCh
Confidence 53 357777655433211110000 1368999987 988853
No 84
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.10 E-value=1.2e-10 Score=107.98 Aligned_cols=91 Identities=12% Similarity=0.170 Sum_probs=69.8
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEc
Q 022298 134 EVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTV 213 (299)
Q Consensus 134 d~Vrealfn~L~~~~~~~~~~~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~ 213 (299)
+.+.+.+.+.+.. ..+.+|||+|||+|.++..++.+++ +|++||+|+.++ +.+++|++..+. ++++++++
T Consensus 28 ~~i~~~i~~~~~~-------~~~~~VLDiG~G~G~lt~~La~~~~-~v~~vDi~~~~~-~~a~~~~~~~~~-~~v~~~~~ 97 (299)
T 2h1r_A 28 PGILDKIIYAAKI-------KSSDIVLEIGCGTGNLTVKLLPLAK-KVITIDIDSRMI-SEVKKRCLYEGY-NNLEVYEG 97 (299)
T ss_dssp HHHHHHHHHHHCC-------CTTCEEEEECCTTSTTHHHHTTTSS-EEEEECSCHHHH-HHHHHHHHHTTC-CCEEC---
T ss_pred HHHHHHHHHhcCC-------CCcCEEEEEcCcCcHHHHHHHhcCC-EEEEEECCHHHH-HHHHHHHHHcCC-CceEEEEC
Confidence 3455566565542 3578999999999999998887765 799999999998 999999988877 45889999
Q ss_pred chhhHHHHHhhhcCCCCCeeEEEEcCCCCC
Q 022298 214 RVETFLERAEQFVGKDGPFDYMSVTPPYTA 243 (299)
Q Consensus 214 D~~~~l~~~~~~~~~~~~fDlI~iDPPY~~ 243 (299)
|+.++. ...||+|++||||..
T Consensus 98 D~~~~~---------~~~~D~Vv~n~py~~ 118 (299)
T 2h1r_A 98 DAIKTV---------FPKFDVCTANIPYKI 118 (299)
T ss_dssp -CCSSC---------CCCCSEEEEECCGGG
T ss_pred chhhCC---------cccCCEEEEcCCccc
Confidence 987642 257999999999974
No 85
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.09 E-value=2.2e-10 Score=113.29 Aligned_cols=80 Identities=20% Similarity=0.262 Sum_probs=68.4
Q ss_pred CCCEEEEECCccchHHHHHHHc--CCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCe
Q 022298 155 RPGRWLDLYSGTGSVGIEAISR--GCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPF 232 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSr--Ga~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~f 232 (299)
.+.+|||+|||+|..++.++.+ +..+|+++|+++.++ +.+++|++.+|+.+ ++++++|+.++.... .+.|
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l-~~~~~n~~r~g~~n-v~~~~~D~~~~~~~~------~~~f 188 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRV-KVLHANISRCGISN-VALTHFDGRVFGAAV------PEMF 188 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHH-HHHHHHHHHHTCCS-EEEECCCSTTHHHHS------TTCE
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHH-HHHHHHHHHcCCCc-EEEEeCCHHHhhhhc------cccC
Confidence 5789999999999999988775 245899999999998 99999999999865 889999988764321 3689
Q ss_pred eEEEEcCCCC
Q 022298 233 DYMSVTPPYT 242 (299)
Q Consensus 233 DlI~iDPPY~ 242 (299)
|.|++||||.
T Consensus 189 D~Il~D~PcS 198 (479)
T 2frx_A 189 DAILLDAPCS 198 (479)
T ss_dssp EEEEEECCCC
T ss_pred CEEEECCCcC
Confidence 9999999985
No 86
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.08 E-value=1.5e-10 Score=108.82 Aligned_cols=77 Identities=14% Similarity=0.081 Sum_probs=64.7
Q ss_pred CCCEEEEECCccchHHHHHHHcCC------CEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCC
Q 022298 155 RPGRWLDLYSGTGSVGIEAISRGC------SEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGK 228 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSrGa------~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~ 228 (299)
.+.+|||+|||||.+.++++.+.. .+++++|+|+.++ ++++.|+...|. .+.++++|+.... .
T Consensus 130 ~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~-~~a~~n~~~~g~--~~~i~~~D~l~~~--------~ 198 (344)
T 2f8l_A 130 KNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLI-SLALVGADLQRQ--KMTLLHQDGLANL--------L 198 (344)
T ss_dssp SEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHH-HHHHHHHHHHTC--CCEEEESCTTSCC--------C
T ss_pred CCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHH-HHHHHHHHhCCC--CceEEECCCCCcc--------c
Confidence 467999999999999999887532 5799999999998 999999998887 3678999976532 2
Q ss_pred CCCeeEEEEcCCCC
Q 022298 229 DGPFDYMSVTPPYT 242 (299)
Q Consensus 229 ~~~fDlI~iDPPY~ 242 (299)
..+||+|++||||.
T Consensus 199 ~~~fD~Ii~NPPfg 212 (344)
T 2f8l_A 199 VDPVDVVISDLPVG 212 (344)
T ss_dssp CCCEEEEEEECCCS
T ss_pred cCCccEEEECCCCC
Confidence 36899999999975
No 87
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.08 E-value=8.7e-10 Score=96.32 Aligned_cols=84 Identities=17% Similarity=0.052 Sum_probs=69.8
Q ss_pred CCCEEEEECCccchHHHHHHHc-C-CCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCC--C
Q 022298 155 RPGRWLDLYSGTGSVGIEAISR-G-CSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKD--G 230 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSr-G-a~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~--~ 230 (299)
.+.+|||+|||+|..++.++.. + ..+|+++|+++.++ +.+++|++.+++.++++++.+|+.+.+.... ... +
T Consensus 69 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~-~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~---~~~~~~ 144 (229)
T 2avd_A 69 QAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPP-ELGRPLWRQAEAEHKIDLRLKPALETLDELL---AAGEAG 144 (229)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHH-HHHHHHHHHTTCTTTEEEEESCHHHHHHHHH---HTTCTT
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHH-HHHHHHHHHCCCCCeEEEEEcCHHHHHHHHH---hcCCCC
Confidence 5789999999999999987764 2 45899999999998 9999999999987789999999988765431 111 5
Q ss_pred CeeEEEEcCCCC
Q 022298 231 PFDYMSVTPPYT 242 (299)
Q Consensus 231 ~fDlI~iDPPY~ 242 (299)
.||+||+|+|..
T Consensus 145 ~~D~v~~d~~~~ 156 (229)
T 2avd_A 145 TFDVAVVDADKE 156 (229)
T ss_dssp CEEEEEECSCST
T ss_pred CccEEEECCCHH
Confidence 899999999844
No 88
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=99.07 E-value=3.4e-10 Score=108.39 Aligned_cols=83 Identities=19% Similarity=0.142 Sum_probs=68.7
Q ss_pred CCCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHhC---CCC----cEEEEEcchhhHHHHHhhhcC
Q 022298 155 RPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTG---FLD----VSSIHTVRVETFLERAEQFVG 227 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g---~~~----~~~vi~~D~~~~l~~~~~~~~ 227 (299)
.+.+|||+|||+|.++.|++++++.+|++||+|+.++ +.+++|+..++ +.+ +++++.+|+.++++... .
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~~~~Vt~VEID~~vi-e~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~---~ 263 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVI-DGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYA---K 263 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHH-HHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHH---H
T ss_pred CCCEEEEEECChhHHHHHHHHCCCCEEEEEECCHHHH-HHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhh---c
Confidence 4789999999999999999999888999999999998 99999975432 222 68999999999997531 0
Q ss_pred CCCCeeEEEEcCCC
Q 022298 228 KDGPFDYMSVTPPY 241 (299)
Q Consensus 228 ~~~~fDlI~iDPPY 241 (299)
..++||+||+|||.
T Consensus 264 ~~~~fDvII~D~~d 277 (364)
T 2qfm_A 264 EGREFDYVINDLTA 277 (364)
T ss_dssp HTCCEEEEEEECCS
T ss_pred cCCCceEEEECCCC
Confidence 14689999999975
No 89
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.07 E-value=5e-10 Score=97.08 Aligned_cols=79 Identities=14% Similarity=0.044 Sum_probs=66.5
Q ss_pred CCCEEEEECCccchHHHHHHHc-C-CCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCe
Q 022298 155 RPGRWLDLYSGTGSVGIEAISR-G-CSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPF 232 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSr-G-a~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~f 232 (299)
.+.+|||+|||+|..++.++.. + ..+|+++|+++.++ +.+++|++..++.++++++.+|+.+++.. ..+ |
T Consensus 56 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~-~~a~~~~~~~~~~~~v~~~~~d~~~~~~~------~~~-f 127 (210)
T 3c3p_A 56 QPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNV-EHARRMLHDNGLIDRVELQVGDPLGIAAG------QRD-I 127 (210)
T ss_dssp CCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHH-HHHHHHHHHHSGGGGEEEEESCHHHHHTT------CCS-E
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHH-HHHHHHHHHCCCCceEEEEEecHHHHhcc------CCC-C
Confidence 4679999999999999987765 1 35899999999998 99999999999877899999999876532 135 9
Q ss_pred eEEEEcCCC
Q 022298 233 DYMSVTPPY 241 (299)
Q Consensus 233 DlI~iDPPY 241 (299)
|+||+|.+.
T Consensus 128 D~v~~~~~~ 136 (210)
T 3c3p_A 128 DILFMDCDV 136 (210)
T ss_dssp EEEEEETTT
T ss_pred CEEEEcCCh
Confidence 999999764
No 90
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.07 E-value=3.5e-10 Score=111.84 Aligned_cols=92 Identities=15% Similarity=0.116 Sum_probs=75.4
Q ss_pred CHHHHHHHHHHHHHhcCCCCCCCCCCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEE
Q 022298 132 MMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIH 211 (299)
Q Consensus 132 ttd~Vrealfn~L~~~~~~~~~~~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi 211 (299)
.++...++++..+.. ..+.+|||+|||+|.+++.++.+|+.+|++||+++ ++ +.+++|++.+++.++++++
T Consensus 142 ~t~~~~~~il~~l~~-------~~~~~VLDiGcGtG~la~~la~~~~~~V~gvD~s~-~l-~~A~~~~~~~gl~~~v~~~ 212 (480)
T 3b3j_A 142 RTGTYQRAILQNHTD-------FKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MA-QHAEVLVKSNNLTDRIVVI 212 (480)
T ss_dssp HHHHHHHHHHHTGGG-------TTTCEEEEESCSTTHHHHHHHHTTCSEEEEEECHH-HH-HHHHHHHHHTTCTTTEEEE
T ss_pred hHHHHHHHHHHhhhh-------cCCCEEEEecCcccHHHHHHHHcCCCEEEEEEcHH-HH-HHHHHHHHHcCCCCcEEEE
Confidence 344455556555532 35789999999999999999888888999999998 87 8999999999997789999
Q ss_pred EcchhhHHHHHhhhcCCCCCeeEEEEcCC
Q 022298 212 TVRVETFLERAEQFVGKDGPFDYMSVTPP 240 (299)
Q Consensus 212 ~~D~~~~l~~~~~~~~~~~~fDlI~iDPP 240 (299)
++|+.++. ..++||+|+++||
T Consensus 213 ~~d~~~~~--------~~~~fD~Ivs~~~ 233 (480)
T 3b3j_A 213 PGKVEEVS--------LPEQVDIIISEPM 233 (480)
T ss_dssp ESCTTTCC--------CSSCEEEEECCCC
T ss_pred ECchhhCc--------cCCCeEEEEEeCc
Confidence 99987641 1358999999998
No 91
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.06 E-value=6.7e-10 Score=104.97 Aligned_cols=77 Identities=19% Similarity=0.108 Sum_probs=68.4
Q ss_pred CCCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCeeE
Q 022298 155 RPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDY 234 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fDl 234 (299)
++.+|||+|||+|.+++.++.+|+.+|++||+++ ++ +.+++|++.+++.++++++++|+.++. ...++||+
T Consensus 66 ~~~~VLDvGcG~G~~~~~la~~g~~~v~gvD~s~-~l-~~a~~~~~~~~~~~~v~~~~~d~~~~~-------~~~~~fD~ 136 (349)
T 3q7e_A 66 KDKVVLDVGSGTGILCMFAAKAGARKVIGIECSS-IS-DYAVKIVKANKLDHVVTIIKGKVEEVE-------LPVEKVDI 136 (349)
T ss_dssp TTCEEEEESCTTSHHHHHHHHTTCSEEEEEECST-HH-HHHHHHHHHTTCTTTEEEEESCTTTCC-------CSSSCEEE
T ss_pred CCCEEEEEeccchHHHHHHHHCCCCEEEEECcHH-HH-HHHHHHHHHcCCCCcEEEEECcHHHcc-------CCCCceEE
Confidence 5789999999999999999999988999999995 87 999999999999888999999998752 12478999
Q ss_pred EEEcCC
Q 022298 235 MSVTPP 240 (299)
Q Consensus 235 I~iDPP 240 (299)
|+++++
T Consensus 137 Iis~~~ 142 (349)
T 3q7e_A 137 IISEWM 142 (349)
T ss_dssp EEECCC
T ss_pred EEEccc
Confidence 999986
No 92
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.06 E-value=8.7e-10 Score=99.28 Aligned_cols=86 Identities=9% Similarity=0.071 Sum_probs=69.1
Q ss_pred CCCEEEEECCccchHHHHHHHc-C-CCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCe
Q 022298 155 RPGRWLDLYSGTGSVGIEAISR-G-CSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPF 232 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSr-G-a~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~f 232 (299)
.+.+|||+|||+|..++.++.. + ..+|+++|+|+.++ +.+++|++..++.++++++.+|+.+++.....-....+.|
T Consensus 79 ~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~-~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~f 157 (247)
T 1sui_A 79 NAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENY-ELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHGSY 157 (247)
T ss_dssp TCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHH-HHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGTTCB
T ss_pred CcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHH-HHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccCCCCCE
Confidence 4679999999999999987765 1 34799999999998 9999999999987789999999988765431000003689
Q ss_pred eEEEEcCCC
Q 022298 233 DYMSVTPPY 241 (299)
Q Consensus 233 DlI~iDPPY 241 (299)
|+||+|.+.
T Consensus 158 D~V~~d~~~ 166 (247)
T 1sui_A 158 DFIFVDADK 166 (247)
T ss_dssp SEEEECSCS
T ss_pred EEEEEcCch
Confidence 999999864
No 93
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.06 E-value=1.1e-09 Score=103.28 Aligned_cols=90 Identities=16% Similarity=0.108 Sum_probs=74.0
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcch
Q 022298 136 VKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRV 215 (299)
Q Consensus 136 Vrealfn~L~~~~~~~~~~~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~ 215 (299)
..+++...+.. .++.+|||+|||+|.+++.++.+|+.+|++||+++ .+ +.+++|++.+++.++++++.+|+
T Consensus 38 y~~~i~~~l~~-------~~~~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s~-~~-~~a~~~~~~~~l~~~v~~~~~d~ 108 (348)
T 2y1w_A 38 YQRAILQNHTD-------FKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MA-QHAEVLVKSNNLTDRIVVIPGKV 108 (348)
T ss_dssp HHHHHHHTGGG-------TTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-HH-HHHHHHHHHTTCTTTEEEEESCT
T ss_pred HHHHHHhcccc-------CCcCEEEEcCCCccHHHHHHHhCCCCEEEEECCHH-HH-HHHHHHHHHcCCCCcEEEEEcch
Confidence 44555555543 36789999999999999999999988999999996 66 89999999999877899999998
Q ss_pred hhHHHHHhhhcCCCCCeeEEEEcCCCC
Q 022298 216 ETFLERAEQFVGKDGPFDYMSVTPPYT 242 (299)
Q Consensus 216 ~~~l~~~~~~~~~~~~fDlI~iDPPY~ 242 (299)
.++. ..++||+|+++++..
T Consensus 109 ~~~~--------~~~~~D~Ivs~~~~~ 127 (348)
T 2y1w_A 109 EEVS--------LPEQVDIIISEPMGY 127 (348)
T ss_dssp TTCC--------CSSCEEEEEECCCBT
T ss_pred hhCC--------CCCceeEEEEeCchh
Confidence 7641 135799999999854
No 94
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.05 E-value=1.1e-09 Score=98.24 Aligned_cols=83 Identities=18% Similarity=0.142 Sum_probs=69.7
Q ss_pred CCCEEEEECCccchHHHHHHHc-C-CCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCe
Q 022298 155 RPGRWLDLYSGTGSVGIEAISR-G-CSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPF 232 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSr-G-a~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~f 232 (299)
.+.+|||+|||+|..++.++.+ + ..+|++||+++.++ +.+++|++..++.++++++.+|+.+++... ...++|
T Consensus 63 ~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~-~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~----~~~~~f 137 (248)
T 3tfw_A 63 QAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHA-QVARENLQLAGVDQRVTLREGPALQSLESL----GECPAF 137 (248)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHH-HHHHHHHHHTTCTTTEEEEESCHHHHHHTC----CSCCCC
T ss_pred CCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHH-HHHHHHHHHcCCCCcEEEEEcCHHHHHHhc----CCCCCe
Confidence 4789999999999999987765 2 45899999999998 999999999999878999999998876432 112489
Q ss_pred eEEEEcCCCC
Q 022298 233 DYMSVTPPYT 242 (299)
Q Consensus 233 DlI~iDPPY~ 242 (299)
|+||+|.+..
T Consensus 138 D~V~~d~~~~ 147 (248)
T 3tfw_A 138 DLIFIDADKP 147 (248)
T ss_dssp SEEEECSCGG
T ss_pred EEEEECCchH
Confidence 9999998754
No 95
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.05 E-value=4.5e-10 Score=104.83 Aligned_cols=80 Identities=15% Similarity=0.068 Sum_probs=68.0
Q ss_pred CCCEEEEECCccchHHHHHHHc--CCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCe
Q 022298 155 RPGRWLDLYSGTGSVGIEAISR--GCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPF 232 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSr--Ga~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~f 232 (299)
.+.+|||+|||+|..++.++.+ +..+|+++|+++.++ +.+++|++.+|+.+ ++++++|+.++.. ..+.|
T Consensus 118 ~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l-~~a~~~~~~~g~~~-v~~~~~D~~~~~~-------~~~~f 188 (315)
T 1ixk_A 118 PGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRL-RETRLNLSRLGVLN-VILFHSSSLHIGE-------LNVEF 188 (315)
T ss_dssp TTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHH-HHHHHHHHHHTCCS-EEEESSCGGGGGG-------GCCCE
T ss_pred CCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHH-HHHHHHHHHhCCCe-EEEEECChhhccc-------ccccC
Confidence 5789999999999999988764 345899999999998 99999999999865 8899999887642 13689
Q ss_pred eEEEEcCCCCC
Q 022298 233 DYMSVTPPYTA 243 (299)
Q Consensus 233 DlI~iDPPY~~ 243 (299)
|+|++|||+..
T Consensus 189 D~Il~d~Pcsg 199 (315)
T 1ixk_A 189 DKILLDAPCTG 199 (315)
T ss_dssp EEEEEECCTTS
T ss_pred CEEEEeCCCCC
Confidence 99999999753
No 96
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=99.05 E-value=2.5e-10 Score=111.31 Aligned_cols=98 Identities=20% Similarity=0.119 Sum_probs=76.7
Q ss_pred CCCHHHHHHHHHHHHHhcCCCCCCCCCCEEEEECCccchHHHHHHHc--------------CCCEEEEEeCCHHHHHHHH
Q 022298 130 RPMMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISR--------------GCSEVHFVEMDPWVVSNVL 195 (299)
Q Consensus 130 RPttd~Vrealfn~L~~~~~~~~~~~~~~VLDLfaGSGalgIEAlSr--------------Ga~~V~~VD~n~~Al~~~a 195 (299)
-.|+..+.+.+.+.+.. ..+.+|||+|||||.+.++++.+ ...+++++|+|+.++ +++
T Consensus 153 fyTP~~v~~~mv~~l~~-------~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~-~lA 224 (445)
T 2okc_A 153 YFTPRPLIQAMVDCINP-------QMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVV-TLA 224 (445)
T ss_dssp GCCCHHHHHHHHHHHCC-------CTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHH-HHH
T ss_pred ccCcHHHHHHHHHHhCC-------CCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHH-HHH
Confidence 45666677777777653 34679999999999999988753 123599999999998 999
Q ss_pred HHHHHHhCCCC-cEEEEEcchhhHHHHHhhhcCCCCCeeEEEEcCCCCC
Q 022298 196 IPNLEWTGFLD-VSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTA 243 (299)
Q Consensus 196 ~~N~~~~g~~~-~~~vi~~D~~~~l~~~~~~~~~~~~fDlI~iDPPY~~ 243 (299)
+.|+...|+.+ ...++++|..... ...+||+|++||||..
T Consensus 225 ~~nl~l~g~~~~~~~i~~gD~l~~~--------~~~~fD~Iv~NPPf~~ 265 (445)
T 2okc_A 225 SMNLYLHGIGTDRSPIVCEDSLEKE--------PSTLVDVILANPPFGT 265 (445)
T ss_dssp HHHHHHTTCCSSCCSEEECCTTTSC--------CSSCEEEEEECCCSSC
T ss_pred HHHHHHhCCCcCCCCEeeCCCCCCc--------ccCCcCEEEECCCCCC
Confidence 99999888752 4678999976532 1348999999999985
No 97
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.05 E-value=4.9e-10 Score=97.54 Aligned_cols=80 Identities=11% Similarity=0.052 Sum_probs=66.4
Q ss_pred CCCEEEEECCccchHHHHHHHcC-CCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCee
Q 022298 155 RPGRWLDLYSGTGSVGIEAISRG-CSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFD 233 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSrG-a~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fD 233 (299)
.+.+|||+|||+|.+++.++.+. ..+|++||+++.++ +.+++|++.+++. +++++++|+.++.... ..+.||
T Consensus 41 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l-~~a~~~~~~~~~~-~v~~~~~d~~~~~~~~-----~~~~~D 113 (214)
T 1yzh_A 41 DNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVL-SYALDKVLEVGVP-NIKLLWVDGSDLTDYF-----EDGEID 113 (214)
T ss_dssp CCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHH-HHHHHHHHHHCCS-SEEEEECCSSCGGGTS-----CTTCCS
T ss_pred CCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHH-HHHHHHHHHcCCC-CEEEEeCCHHHHHhhc-----CCCCCC
Confidence 46799999999999999988764 35899999999998 9999999999984 5899999988743111 246799
Q ss_pred EEEEcCCC
Q 022298 234 YMSVTPPY 241 (299)
Q Consensus 234 lI~iDPPY 241 (299)
+|++++|-
T Consensus 114 ~i~~~~~~ 121 (214)
T 1yzh_A 114 RLYLNFSD 121 (214)
T ss_dssp EEEEESCC
T ss_pred EEEEECCC
Confidence 99999884
No 98
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.05 E-value=6.7e-10 Score=95.42 Aligned_cols=96 Identities=21% Similarity=0.171 Sum_probs=74.9
Q ss_pred CCCHHHHHHHHHHHHHhcCCCCCCCCCCEEEEECCccchHHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcE
Q 022298 130 RPMMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISR-GCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVS 208 (299)
Q Consensus 130 RPttd~Vrealfn~L~~~~~~~~~~~~~~VLDLfaGSGalgIEAlSr-Ga~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~ 208 (299)
||.++.+.+.+++.+.... ..++.+|||+|||+|.+++.++.+ +..+|+++|+++.++ +.+++|++.+++.+ +
T Consensus 44 ~~~~~~~~~~~~~~l~~~~----~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~-~~a~~~~~~~~~~~-v 117 (207)
T 1jsx_A 44 RDPNEMLVRHILDSIVVAP----YLQGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRV-RFLRQVQHELKLEN-I 117 (207)
T ss_dssp ----CHHHHHHHHHHHHGG----GCCSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHH-HHHHHHHHHTTCSS-E
T ss_pred CCHHHHHHHHHHhhhhhhh----hcCCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHH-HHHHHHHHHcCCCC-e
Confidence 7888888888888776421 024789999999999999988775 345899999999998 99999999999876 8
Q ss_pred EEEEcchhhHHHHHhhhcCCCCCeeEEEEcC
Q 022298 209 SIHTVRVETFLERAEQFVGKDGPFDYMSVTP 239 (299)
Q Consensus 209 ~vi~~D~~~~l~~~~~~~~~~~~fDlI~iDP 239 (299)
+++++|+.++. ..++||+|+++.
T Consensus 118 ~~~~~d~~~~~--------~~~~~D~i~~~~ 140 (207)
T 1jsx_A 118 EPVQSRVEEFP--------SEPPFDGVISRA 140 (207)
T ss_dssp EEEECCTTTSC--------CCSCEEEEECSC
T ss_pred EEEecchhhCC--------ccCCcCEEEEec
Confidence 99999987653 136899999874
No 99
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.04 E-value=1e-09 Score=97.20 Aligned_cols=101 Identities=11% Similarity=0.043 Sum_probs=79.9
Q ss_pred CCCCHHHHHHHHHHHHHhcCCCCCCCCCCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcE
Q 022298 129 VRPMMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVS 208 (299)
Q Consensus 129 ~RPttd~Vrealfn~L~~~~~~~~~~~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~ 208 (299)
.+|......+.+++.+... ..+.+|||+|||+|.+++.++.++..+|+++|+++.++ +.+++|+...++.+++
T Consensus 26 ~~~~~~~~~~~~l~~l~~~------~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~-~~a~~~~~~~~~~~~~ 98 (257)
T 3f4k_A 26 QGPGSPEATRKAVSFINEL------TDDAKIADIGCGTGGQTLFLADYVKGQITGIDLFPDFI-EIFNENAVKANCADRV 98 (257)
T ss_dssp SSSCCHHHHHHHHTTSCCC------CTTCEEEEETCTTSHHHHHHHHHCCSEEEEEESCHHHH-HHHHHHHHHTTCTTTE
T ss_pred cCCCCHHHHHHHHHHHhcC------CCCCeEEEeCCCCCHHHHHHHHhCCCeEEEEECCHHHH-HHHHHHHHHcCCCCce
Confidence 3566666666665555321 24679999999999999998888655899999999998 9999999999998889
Q ss_pred EEEEcchhhHHHHHhhhcCCCCCeeEEEEcCCCCC
Q 022298 209 SIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTA 243 (299)
Q Consensus 209 ~vi~~D~~~~l~~~~~~~~~~~~fDlI~iDPPY~~ 243 (299)
+++++|+.++. ...++||+|+++-....
T Consensus 99 ~~~~~d~~~~~-------~~~~~fD~v~~~~~l~~ 126 (257)
T 3f4k_A 99 KGITGSMDNLP-------FQNEELDLIWSEGAIYN 126 (257)
T ss_dssp EEEECCTTSCS-------SCTTCEEEEEEESCSCC
T ss_pred EEEECChhhCC-------CCCCCEEEEEecChHhh
Confidence 99999986542 12478999999876554
No 100
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.04 E-value=2.9e-10 Score=100.18 Aligned_cols=79 Identities=16% Similarity=0.059 Sum_probs=67.4
Q ss_pred CCCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCeeE
Q 022298 155 RPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDY 234 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fDl 234 (299)
.+.+|||+|||+|.++++++++ ..+|+++|+++.++ +.+++|.+.+++.++++++.+|+.+.. ...+.||+
T Consensus 91 ~~~~vldiG~G~G~~~~~l~~~-~~~v~~vD~~~~~~-~~a~~~~~~~~~~~~~~~~~~d~~~~~-------~~~~~~D~ 161 (248)
T 2yvl_A 91 KEKRVLEFGTGSGALLAVLSEV-AGEVWTFEAVEEFY-KTAQKNLKKFNLGKNVKFFNVDFKDAE-------VPEGIFHA 161 (248)
T ss_dssp TTCEEEEECCTTSHHHHHHHHH-SSEEEEECSCHHHH-HHHHHHHHHTTCCTTEEEECSCTTTSC-------CCTTCBSE
T ss_pred CCCEEEEeCCCccHHHHHHHHh-CCEEEEEecCHHHH-HHHHHHHHHcCCCCcEEEEEcChhhcc-------cCCCcccE
Confidence 5789999999999999998888 55899999999998 999999999988667899999987642 01357999
Q ss_pred EEEcCCCC
Q 022298 235 MSVTPPYT 242 (299)
Q Consensus 235 I~iDPPY~ 242 (299)
|++|||..
T Consensus 162 v~~~~~~~ 169 (248)
T 2yvl_A 162 AFVDVREP 169 (248)
T ss_dssp EEECSSCG
T ss_pred EEECCcCH
Confidence 99999844
No 101
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.04 E-value=1.8e-09 Score=96.34 Aligned_cols=86 Identities=12% Similarity=0.067 Sum_probs=69.4
Q ss_pred CCCEEEEECCccchHHHHHHHc-C-CCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCe
Q 022298 155 RPGRWLDLYSGTGSVGIEAISR-G-CSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPF 232 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSr-G-a~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~f 232 (299)
.+.+|||+|||+|..++.++.. + ..+|+++|+|+.++ +.+++|++..++.++++++.+|+.+++.....-....++|
T Consensus 70 ~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~-~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~f 148 (237)
T 3c3y_A 70 NAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAY-EIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESEGSY 148 (237)
T ss_dssp TCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHH-HHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTTCE
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHH-HHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCCCCc
Confidence 4679999999999999988764 2 35899999999998 9999999999987789999999998775431000013689
Q ss_pred eEEEEcCCC
Q 022298 233 DYMSVTPPY 241 (299)
Q Consensus 233 DlI~iDPPY 241 (299)
|+||+|.+.
T Consensus 149 D~I~~d~~~ 157 (237)
T 3c3y_A 149 DFGFVDADK 157 (237)
T ss_dssp EEEEECSCG
T ss_pred CEEEECCch
Confidence 999999764
No 102
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.03 E-value=4.6e-10 Score=103.32 Aligned_cols=91 Identities=19% Similarity=0.171 Sum_probs=73.6
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcc
Q 022298 135 VVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVR 214 (299)
Q Consensus 135 ~Vrealfn~L~~~~~~~~~~~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D 214 (299)
.+.+.+.+.+.. ..+.+|||+|||+|.++..++.+|+ +|++||+|+.++ +.+++|++..+..++++++++|
T Consensus 15 ~i~~~i~~~~~~-------~~~~~VLDiG~G~G~lt~~L~~~~~-~v~~vD~~~~~~-~~a~~~~~~~~~~~~v~~~~~D 85 (285)
T 1zq9_A 15 LIINSIIDKAAL-------RPTDVVLEVGPGTGNMTVKLLEKAK-KVVACELDPRLV-AELHKRVQGTPVASKLQVLVGD 85 (285)
T ss_dssp HHHHHHHHHTCC-------CTTCEEEEECCTTSTTHHHHHHHSS-EEEEEESCHHHH-HHHHHHHTTSTTGGGEEEEESC
T ss_pred HHHHHHHHhcCC-------CCCCEEEEEcCcccHHHHHHHhhCC-EEEEEECCHHHH-HHHHHHHHhcCCCCceEEEEcc
Confidence 355555555532 3578999999999999999888876 799999999998 9999999877665568999999
Q ss_pred hhhHHHHHhhhcCCCCCeeEEEEcCCCCC
Q 022298 215 VETFLERAEQFVGKDGPFDYMSVTPPYTA 243 (299)
Q Consensus 215 ~~~~l~~~~~~~~~~~~fDlI~iDPPY~~ 243 (299)
+.++. ...||+|++|+||..
T Consensus 86 ~~~~~---------~~~fD~vv~nlpy~~ 105 (285)
T 1zq9_A 86 VLKTD---------LPFFDTCVANLPYQI 105 (285)
T ss_dssp TTTSC---------CCCCSEEEEECCGGG
T ss_pred eeccc---------chhhcEEEEecCccc
Confidence 87641 247999999999975
No 103
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.03 E-value=3.8e-10 Score=101.31 Aligned_cols=86 Identities=14% Similarity=0.056 Sum_probs=70.0
Q ss_pred CCCEEEEECCccchHHHHHHHc--CCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCe
Q 022298 155 RPGRWLDLYSGTGSVGIEAISR--GCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPF 232 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSr--Ga~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~f 232 (299)
.+.+|||+|||+|..++.++.. ...+|++||+++.++ +.+++|++.+++.++++++.+|+.+++.....- ...++|
T Consensus 60 ~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~-~~a~~~~~~~g~~~~i~~~~gda~~~l~~~~~~-~~~~~f 137 (242)
T 3r3h_A 60 RAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWT-KHAHPYWREAKQEHKIKLRLGPALDTLHSLLNE-GGEHQF 137 (242)
T ss_dssp TCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSC-CCSHHHHHHTTCTTTEEEEESCHHHHHHHHHHH-HCSSCE
T ss_pred CcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHH-HHHHHHHHHcCCCCcEEEEEcCHHHHHHHHhhc-cCCCCE
Confidence 4679999999999999987763 134799999999998 999999999999878999999998877543100 013689
Q ss_pred eEEEEcCCCC
Q 022298 233 DYMSVTPPYT 242 (299)
Q Consensus 233 DlI~iDPPY~ 242 (299)
|+||+|.+..
T Consensus 138 D~V~~d~~~~ 147 (242)
T 3r3h_A 138 DFIFIDADKT 147 (242)
T ss_dssp EEEEEESCGG
T ss_pred eEEEEcCChH
Confidence 9999999844
No 104
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=99.02 E-value=9.7e-10 Score=110.31 Aligned_cols=107 Identities=17% Similarity=0.066 Sum_probs=81.1
Q ss_pred CCCCHHHHHHHHHHHHHhcCCCCCCCCCCEEEEECCccchHHHHHHHc----CCCEEEEEeCCHHHHHHHHHHHHHHhCC
Q 022298 129 VRPMMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISR----GCSEVHFVEMDPWVVSNVLIPNLEWTGF 204 (299)
Q Consensus 129 ~RPttd~Vrealfn~L~~~~~~~~~~~~~~VLDLfaGSGalgIEAlSr----Ga~~V~~VD~n~~Al~~~a~~N~~~~g~ 204 (299)
.-.|+..|.+.+..++..... ...+.+|+|+|||||++.++++.+ +...++++|+|+.++ ++++.|+...|+
T Consensus 198 ~fyTP~~Vv~lmv~ll~~~~~---~~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~-~lA~~Nl~l~gi 273 (542)
T 3lkd_A 198 EFYTPQPVAKLMTQIAFLGRE---DKQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTY-NLARMNMILHGV 273 (542)
T ss_dssp SCCCCHHHHHHHHHHHHTTCT---TCTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHH-HHHHHHHHHTTC
T ss_pred eecccHHHHHHHHHHHhcccC---CCCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHH-HHHHHHHHHcCC
Confidence 455666777888787763210 025789999999999999998875 356899999999998 999999999888
Q ss_pred C-CcEEEEEcchhhHHHHHhhhcCCCCCeeEEEEcCCCCC
Q 022298 205 L-DVSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTA 243 (299)
Q Consensus 205 ~-~~~~vi~~D~~~~l~~~~~~~~~~~~fDlI~iDPPY~~ 243 (299)
. +...+.++|..... .. .....+||+|++||||..
T Consensus 274 ~~~~~~I~~gDtL~~d-~p---~~~~~~fD~IvaNPPf~~ 309 (542)
T 3lkd_A 274 PIENQFLHNADTLDED-WP---TQEPTNFDGVLMNPPYSA 309 (542)
T ss_dssp CGGGEEEEESCTTTSC-SC---CSSCCCBSEEEECCCTTC
T ss_pred CcCccceEecceeccc-cc---ccccccccEEEecCCcCC
Confidence 5 35789999976430 00 012468999999999985
No 105
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=99.02 E-value=3e-10 Score=108.37 Aligned_cols=89 Identities=17% Similarity=0.114 Sum_probs=69.7
Q ss_pred CCCCHHHHHHHHHHHHHhcCCCCCCCCCCEEEEECCccchHHHHHHHc--CCCEEEEEeCCHHHHHHHHHHHHHHhCCCC
Q 022298 129 VRPMMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISR--GCSEVHFVEMDPWVVSNVLIPNLEWTGFLD 206 (299)
Q Consensus 129 ~RPttd~Vrealfn~L~~~~~~~~~~~~~~VLDLfaGSGalgIEAlSr--Ga~~V~~VD~n~~Al~~~a~~N~~~~g~~~ 206 (299)
.-.|...+.+.+.+.+.. ..+.+|||+|||||.++++++.+ +..+++++|+|+.++ +.+ .
T Consensus 20 ~~~TP~~l~~~~~~~~~~-------~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~-~~a----------~ 81 (421)
T 2ih2_A 20 RVETPPEVVDFMVSLAEA-------PRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKAL-DLP----------P 81 (421)
T ss_dssp -CCCCHHHHHHHHHHCCC-------CTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTC-CCC----------T
T ss_pred eEeCCHHHHHHHHHhhcc-------CCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHH-HhC----------C
Confidence 455667777777777642 24669999999999999998875 446899999999997 665 3
Q ss_pred cEEEEEcchhhHHHHHhhhcCCCCCeeEEEEcCCCCC
Q 022298 207 VSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTA 243 (299)
Q Consensus 207 ~~~vi~~D~~~~l~~~~~~~~~~~~fDlI~iDPPY~~ 243 (299)
+++++++|+.++. ..++||+|++||||..
T Consensus 82 ~~~~~~~D~~~~~--------~~~~fD~Ii~NPPy~~ 110 (421)
T 2ih2_A 82 WAEGILADFLLWE--------PGEAFDLILGNPPYGI 110 (421)
T ss_dssp TEEEEESCGGGCC--------CSSCEEEEEECCCCCC
T ss_pred CCcEEeCChhhcC--------ccCCCCEEEECcCccC
Confidence 4789999988652 2368999999999975
No 106
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.02 E-value=1.5e-09 Score=97.23 Aligned_cols=100 Identities=11% Similarity=0.071 Sum_probs=78.7
Q ss_pred CCCHHHHHHHHHHHHHhcCCCCCCCCCCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEE
Q 022298 130 RPMMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSS 209 (299)
Q Consensus 130 RPttd~Vrealfn~L~~~~~~~~~~~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~ 209 (299)
.|......+.++..+.. ...+.+|||+|||+|.+++.++.++..+|+++|+++.++ +.+++|++..++.++++
T Consensus 27 ~~~~~~~~~~~l~~l~~------~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~-~~a~~~~~~~~~~~~v~ 99 (267)
T 3kkz_A 27 GPGSPEVTLKALSFIDN------LTEKSLIADIGCGTGGQTMVLAGHVTGQVTGLDFLSGFI-DIFNRNARQSGLQNRVT 99 (267)
T ss_dssp SSCCHHHHHHHHTTCCC------CCTTCEEEEETCTTCHHHHHHHTTCSSEEEEEESCHHHH-HHHHHHHHHTTCTTTEE
T ss_pred CCCCHHHHHHHHHhccc------CCCCCEEEEeCCCCCHHHHHHHhccCCEEEEEeCCHHHH-HHHHHHHHHcCCCcCcE
Confidence 45555444445454431 135789999999999999998888766899999999998 99999999999988899
Q ss_pred EEEcchhhHHHHHhhhcCCCCCeeEEEEcCCCCC
Q 022298 210 IHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTA 243 (299)
Q Consensus 210 vi~~D~~~~l~~~~~~~~~~~~fDlI~iDPPY~~ 243 (299)
++++|+.++. ...++||+|++...+..
T Consensus 100 ~~~~d~~~~~-------~~~~~fD~i~~~~~~~~ 126 (267)
T 3kkz_A 100 GIVGSMDDLP-------FRNEELDLIWSEGAIYN 126 (267)
T ss_dssp EEECCTTSCC-------CCTTCEEEEEESSCGGG
T ss_pred EEEcChhhCC-------CCCCCEEEEEEcCCcee
Confidence 9999987642 12468999999887654
No 107
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.01 E-value=2e-09 Score=94.64 Aligned_cols=83 Identities=13% Similarity=0.059 Sum_probs=69.6
Q ss_pred CCCEEEEECCccchHHHHHHHcC-CCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCee
Q 022298 155 RPGRWLDLYSGTGSVGIEAISRG-CSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFD 233 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSrG-a~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fD 233 (299)
.+.+|||+|||+|.+++.++... ..+|+++|+++.++ +.+++|++.+++.++++++.+|+.+.+... ...+.||
T Consensus 54 ~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~-~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~----~~~~~fD 128 (233)
T 2gpy_A 54 APARILEIGTAIGYSAIRMAQALPEATIVSIERDERRY-EEAHKHVKALGLESRIELLFGDALQLGEKL----ELYPLFD 128 (233)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHH-HHHHHHHHHTTCTTTEEEECSCGGGSHHHH----TTSCCEE
T ss_pred CCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHH-HHHHHHHHHcCCCCcEEEEECCHHHHHHhc----ccCCCcc
Confidence 46799999999999999887762 45899999999998 999999999998777999999998865432 0136899
Q ss_pred EEEEcCCCC
Q 022298 234 YMSVTPPYT 242 (299)
Q Consensus 234 lI~iDPPY~ 242 (299)
+|++|+|..
T Consensus 129 ~I~~~~~~~ 137 (233)
T 2gpy_A 129 VLFIDAAKG 137 (233)
T ss_dssp EEEEEGGGS
T ss_pred EEEECCCHH
Confidence 999999864
No 108
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.01 E-value=6.5e-10 Score=101.35 Aligned_cols=93 Identities=15% Similarity=0.183 Sum_probs=71.1
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcc
Q 022298 135 VVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVR 214 (299)
Q Consensus 135 ~Vrealfn~L~~~~~~~~~~~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D 214 (299)
.+.+.+.+.+.. .++.+|||+|||+|.++.+++.+| .+|++||+|+.++ +.+++|+.. .++++++++|
T Consensus 16 ~i~~~iv~~~~~-------~~~~~VLEIG~G~G~lt~~La~~~-~~V~avEid~~~~-~~~~~~~~~---~~~v~~i~~D 83 (255)
T 3tqs_A 16 FVLQKIVSAIHP-------QKTDTLVEIGPGRGALTDYLLTEC-DNLALVEIDRDLV-AFLQKKYNQ---QKNITIYQND 83 (255)
T ss_dssp HHHHHHHHHHCC-------CTTCEEEEECCTTTTTHHHHTTTS-SEEEEEECCHHHH-HHHHHHHTT---CTTEEEEESC
T ss_pred HHHHHHHHhcCC-------CCcCEEEEEcccccHHHHHHHHhC-CEEEEEECCHHHH-HHHHHHHhh---CCCcEEEEcc
Confidence 355566666643 357899999999999999988887 4799999999998 999999865 2458999999
Q ss_pred hhhHHHHHhhhcCCCCCeeEEEEcCCCCC
Q 022298 215 VETFLERAEQFVGKDGPFDYMSVTPPYTA 243 (299)
Q Consensus 215 ~~~~l~~~~~~~~~~~~fDlI~iDPPY~~ 243 (299)
+.++.- ..+ ...++|| |+.||||..
T Consensus 84 ~~~~~~--~~~-~~~~~~~-vv~NlPY~i 108 (255)
T 3tqs_A 84 ALQFDF--SSV-KTDKPLR-VVGNLPYNI 108 (255)
T ss_dssp TTTCCG--GGS-CCSSCEE-EEEECCHHH
T ss_pred hHhCCH--HHh-ccCCCeE-EEecCCccc
Confidence 987621 000 0135688 899999974
No 109
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.00 E-value=2.7e-09 Score=94.39 Aligned_cols=83 Identities=11% Similarity=0.097 Sum_probs=68.9
Q ss_pred CCCEEEEECCccchHHHHHHHcC-CCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCee
Q 022298 155 RPGRWLDLYSGTGSVGIEAISRG-CSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFD 233 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSrG-a~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fD 233 (299)
.+.+|||+|||+|.+++.++.++ ...|++||+++.++ +.+++|++..++.+ ++++++|+.+++... ...+.||
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l-~~a~~~~~~~~l~n-v~~~~~Da~~~l~~~----~~~~~~d 107 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGV-GACLASAHEEGLSN-LRVMCHDAVEVLHKM----IPDNSLR 107 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHH-HHHHHHHHHTTCSS-EEEECSCHHHHHHHH----SCTTCEE
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHH-HHHHHHHHHhCCCc-EEEEECCHHHHHHHH----cCCCChh
Confidence 46799999999999999887764 34799999999998 99999999999876 899999999876532 1257899
Q ss_pred EEEEc--CCCCC
Q 022298 234 YMSVT--PPYTA 243 (299)
Q Consensus 234 lI~iD--PPY~~ 243 (299)
.|+++ +||..
T Consensus 108 ~v~~~~~~p~~~ 119 (218)
T 3dxy_A 108 MVQLFFPDPWHK 119 (218)
T ss_dssp EEEEESCCCCCS
T ss_pred eEEEeCCCCccc
Confidence 99997 66543
No 110
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.99 E-value=8.3e-10 Score=110.65 Aligned_cols=102 Identities=13% Similarity=-0.011 Sum_probs=77.9
Q ss_pred CCCCHHHHHHHHHHHHHhcCCCCCCCCCCEEEEECCccchHHHHHHHc----C---------------CCEEEEEeCCHH
Q 022298 129 VRPMMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISR----G---------------CSEVHFVEMDPW 189 (299)
Q Consensus 129 ~RPttd~Vrealfn~L~~~~~~~~~~~~~~VLDLfaGSGalgIEAlSr----G---------------a~~V~~VD~n~~ 189 (299)
...|+..+.+.+..++.. ..+.+|||+|||||++.++++.+ + ...++++|+|+.
T Consensus 150 ~fyTP~~iv~~mv~~l~p-------~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~ 222 (541)
T 2ar0_A 150 QYFTPRPLIKTIIHLLKP-------QPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPG 222 (541)
T ss_dssp CCCCCHHHHHHHHHHHCC-------CTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHH
T ss_pred eeeCCHHHHHHHHHHhcc-------CCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHH
Confidence 345666677777777653 35679999999999999988753 1 136999999999
Q ss_pred HHHHHHHHHHHHhCCCC----cEEEEEcchhhHHHHHhhhcCCCCCeeEEEEcCCCCCC
Q 022298 190 VVSNVLIPNLEWTGFLD----VSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTAV 244 (299)
Q Consensus 190 Al~~~a~~N~~~~g~~~----~~~vi~~D~~~~l~~~~~~~~~~~~fDlI~iDPPY~~~ 244 (299)
++ ++++.|+...+..+ ...++++|....... ...+||+|++||||...
T Consensus 223 ~~-~lA~~nl~l~gi~~~~~~~~~I~~gDtL~~~~~------~~~~fD~Vv~NPPf~~~ 274 (541)
T 2ar0_A 223 TR-RLALMNCLLHDIEGNLDHGGAIRLGNTLGSDGE------NLPKAHIVATNPPFGSA 274 (541)
T ss_dssp HH-HHHHHHHHTTTCCCBGGGTBSEEESCTTSHHHH------TSCCEEEEEECCCCTTC
T ss_pred HH-HHHHHHHHHhCCCccccccCCeEeCCCcccccc------cccCCeEEEECCCcccc
Confidence 98 99999999888754 257899997654321 13689999999999863
No 111
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=98.99 E-value=1.6e-09 Score=97.83 Aligned_cols=99 Identities=22% Similarity=0.128 Sum_probs=72.8
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCEEEEECCccchHHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEE
Q 022298 133 MEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISR-GCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIH 211 (299)
Q Consensus 133 td~Vrealfn~L~~~~~~~~~~~~~~VLDLfaGSGalgIEAlSr-Ga~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi 211 (299)
.+.+...+++.+......+ ...+.+|||+|||+|.+++.++.. +..+|++||+++.++ +.+++|++.+++.+ ++++
T Consensus 59 ~~~~~~~~~ds~~~l~~~~-~~~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~-~~a~~~~~~~~l~~-v~~~ 135 (249)
T 3g89_A 59 EEVVVKHFLDSLTLLRLPL-WQGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKV-AFVERAIEVLGLKG-ARAL 135 (249)
T ss_dssp HHHHHHHHHHHHGGGGSSC-CCSSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHH-HHHHHHHHHHTCSS-EEEE
T ss_pred HHHhhceeeechhhhcccc-cCCCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHH-HHHHHHHHHhCCCc-eEEE
Confidence 3445555655554321000 124789999999999999987764 556899999999998 99999999999976 9999
Q ss_pred EcchhhHHHHHhhhcCCCCCeeEEEEc
Q 022298 212 TVRVETFLERAEQFVGKDGPFDYMSVT 238 (299)
Q Consensus 212 ~~D~~~~l~~~~~~~~~~~~fDlI~iD 238 (299)
++|+.++.... ...++||+|+++
T Consensus 136 ~~d~~~~~~~~----~~~~~fD~I~s~ 158 (249)
T 3g89_A 136 WGRAEVLAREA----GHREAYARAVAR 158 (249)
T ss_dssp ECCHHHHTTST----TTTTCEEEEEEE
T ss_pred ECcHHHhhccc----ccCCCceEEEEC
Confidence 99998764210 013689999986
No 112
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=98.99 E-value=3.2e-09 Score=94.21 Aligned_cols=104 Identities=16% Similarity=0.077 Sum_probs=75.8
Q ss_pred CCCCHHHHHHHHHHHHHhcCCCCCCCCCCEEEEECCccchHHHHHHH-cCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCc
Q 022298 129 VRPMMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAIS-RGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDV 207 (299)
Q Consensus 129 ~RPttd~Vrealfn~L~~~~~~~~~~~~~~VLDLfaGSGalgIEAlS-rGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~ 207 (299)
.++..+.+.+.+++.+....... ...+.+|||+|||+|.+++.++. ....+|++||+++.++ +.+++|++.+++.+
T Consensus 45 ~~~~~~~~~~~~~d~l~~~~~~~-~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~-~~a~~~~~~~~~~~- 121 (240)
T 1xdz_A 45 ITEKKEVYLKHFYDSITAAFYVD-FNQVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRI-TFLEKLSEALQLEN- 121 (240)
T ss_dssp CCSHHHHHHHTHHHHHGGGGTSC-GGGCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHH-HHHHHHHHHHTCSS-
T ss_pred cCCHHHHHHHHHHHHHhHHHhcc-cCCCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHH-HHHHHHHHHcCCCC-
Confidence 34556667777777664210000 01468999999999999998774 3345799999999998 99999999999865
Q ss_pred EEEEEcchhhHHHHHhhhcCCCCCeeEEEEcC
Q 022298 208 SSIHTVRVETFLERAEQFVGKDGPFDYMSVTP 239 (299)
Q Consensus 208 ~~vi~~D~~~~l~~~~~~~~~~~~fDlI~iDP 239 (299)
++++++|+.++.... ...++||+|+++.
T Consensus 122 v~~~~~d~~~~~~~~----~~~~~fD~V~~~~ 149 (240)
T 1xdz_A 122 TTFCHDRAETFGQRK----DVRESYDIVTARA 149 (240)
T ss_dssp EEEEESCHHHHTTCT----TTTTCEEEEEEEC
T ss_pred EEEEeccHHHhcccc----cccCCccEEEEec
Confidence 999999998753100 0136899999987
No 113
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=98.99 E-value=2.9e-09 Score=94.23 Aligned_cols=95 Identities=15% Similarity=0.054 Sum_probs=76.8
Q ss_pred CCCCCHHHHHHHHHHHHHhcCCCCCCCCCCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCc
Q 022298 128 DVRPMMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDV 207 (299)
Q Consensus 128 ~~RPttd~Vrealfn~L~~~~~~~~~~~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~ 207 (299)
..+|..+...+.+...+.. ..+.+|||+|||+|.+++.++.+...+|+++|+++.++ +.+++|++..++.++
T Consensus 16 ~~~~~~~~~~~~l~~~~~~-------~~~~~VLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~l-~~a~~~~~~~~~~~~ 87 (256)
T 1nkv_A 16 IHNPFTEEKYATLGRVLRM-------KPGTRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFT-AQAKRRAEELGVSER 87 (256)
T ss_dssp SSSSCCHHHHHHHHHHTCC-------CTTCEEEEETCTTCHHHHHHHHHTCCEEEEEESCHHHH-HHHHHHHHHTTCTTT
T ss_pred ccCCCCHHHHHHHHHhcCC-------CCCCEEEEECCCCCHHHHHHHHhcCCeEEEEeCCHHHH-HHHHHHHHhcCCCcc
Confidence 3577777777777766642 35789999999999999988776334799999999998 999999999998777
Q ss_pred EEEEEcchhhHHHHHhhhcCCCCCeeEEEEc
Q 022298 208 SSIHTVRVETFLERAEQFVGKDGPFDYMSVT 238 (299)
Q Consensus 208 ~~vi~~D~~~~l~~~~~~~~~~~~fDlI~iD 238 (299)
++++++|+.+.. . .+.||+|++.
T Consensus 88 v~~~~~d~~~~~-------~-~~~fD~V~~~ 110 (256)
T 1nkv_A 88 VHFIHNDAAGYV-------A-NEKCDVAACV 110 (256)
T ss_dssp EEEEESCCTTCC-------C-SSCEEEEEEE
T ss_pred eEEEECChHhCC-------c-CCCCCEEEEC
Confidence 999999987642 1 4689999974
No 114
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=98.98 E-value=2.6e-09 Score=104.13 Aligned_cols=101 Identities=14% Similarity=0.029 Sum_probs=75.3
Q ss_pred CCCHHHHHHHHHHHHHhcCCCCCCCCCCEEEEECCccchHHHHHHH-cCCCEEEEEeCCHHHHHHHHHHHHH-------H
Q 022298 130 RPMMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAIS-RGCSEVHFVEMDPWVVSNVLIPNLE-------W 201 (299)
Q Consensus 130 RPttd~Vrealfn~L~~~~~~~~~~~~~~VLDLfaGSGalgIEAlS-rGa~~V~~VD~n~~Al~~~a~~N~~-------~ 201 (299)
-++.......+++.+.. .++.+|||||||+|.+.+.++. .|+.+|++||+++.++ +++++|++ .
T Consensus 155 GEt~~~~i~~il~~l~l-------~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~l-elAr~n~e~frkr~~~ 226 (438)
T 3uwp_A 155 GETSFDLVAQMIDEIKM-------TDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPA-KYAETMDREFRKWMKW 226 (438)
T ss_dssp GGTHHHHHHHHHHHHCC-------CTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHH-HHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHhcCC-------CCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHH-HHHHHHHHHHHHHHHH
Confidence 44555555566666542 3678999999999999998775 5777899999999998 99998764 4
Q ss_pred hCCC-CcEEEEEcchhhHHHHHhhhcCCCCCeeEEEEcCCCCC
Q 022298 202 TGFL-DVSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTA 243 (299)
Q Consensus 202 ~g~~-~~~~vi~~D~~~~l~~~~~~~~~~~~fDlI~iDPPY~~ 243 (299)
+|+. ++++++++|+.+..-.. . -..||+||++++|..
T Consensus 227 ~Gl~~~rVefi~GD~~~lp~~d-~----~~~aDVVf~Nn~~F~ 264 (438)
T 3uwp_A 227 YGKKHAEYTLERGDFLSEEWRE-R----IANTSVIFVNNFAFG 264 (438)
T ss_dssp HTBCCCEEEEEECCTTSHHHHH-H----HHTCSEEEECCTTCC
T ss_pred hCCCCCCeEEEECcccCCcccc-c----cCCccEEEEcccccC
Confidence 5653 57999999987653211 0 136999999998753
No 115
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=98.98 E-value=1.2e-09 Score=95.65 Aligned_cols=100 Identities=15% Similarity=0.022 Sum_probs=73.5
Q ss_pred CCCHHHHHHHHHHHHHhcCCCCCCCCCCEEEEECCccchHHHHHHHc-C-CCEEEEEeCCHHHHHHHHHHHHHHhCCCCc
Q 022298 130 RPMMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISR-G-CSEVHFVEMDPWVVSNVLIPNLEWTGFLDV 207 (299)
Q Consensus 130 RPttd~Vrealfn~L~~~~~~~~~~~~~~VLDLfaGSGalgIEAlSr-G-a~~V~~VD~n~~Al~~~a~~N~~~~g~~~~ 207 (299)
+|+..++...+++.+.... ...+.+|||+|||+|.+++.++.+ | ..+|+++|+++.++ +.+++|++.+ .+
T Consensus 52 ~p~~~~~~~~i~~~l~~~~----~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~-~~~~~~~~~~---~~ 123 (227)
T 1g8a_A 52 NPNRSKLGAAIMNGLKNFP----IKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVL-RELVPIVEER---RN 123 (227)
T ss_dssp CTTTCHHHHHHHTTCCCCC----CCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHH-HHHHHHHSSC---TT
T ss_pred CCCchhHHHHHHhhHHhcC----CCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHH-HHHHHHHhcc---CC
Confidence 5666666666655554211 125789999999999999998876 4 35899999999998 8999998765 35
Q ss_pred EEEEEcchhhHHHHHhhhcCCCCCeeEEEEcCCC
Q 022298 208 SSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPY 241 (299)
Q Consensus 208 ~~vi~~D~~~~l~~~~~~~~~~~~fDlI~iDPPY 241 (299)
++++++|+.+.... ....+.||+|++|+|.
T Consensus 124 v~~~~~d~~~~~~~----~~~~~~~D~v~~~~~~ 153 (227)
T 1g8a_A 124 IVPILGDATKPEEY----RALVPKVDVIFEDVAQ 153 (227)
T ss_dssp EEEEECCTTCGGGG----TTTCCCEEEEEECCCS
T ss_pred CEEEEccCCCcchh----hcccCCceEEEECCCC
Confidence 88999998764210 0113579999999983
No 116
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=98.98 E-value=3.1e-09 Score=91.57 Aligned_cols=78 Identities=18% Similarity=0.003 Sum_probs=66.3
Q ss_pred CCCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCeeE
Q 022298 155 RPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDY 234 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fDl 234 (299)
++.+|||+|||+|.+++.++.++ .+|+++|+++.++ +.+++|++.+++. +++++.+|+.+... ..+.||+
T Consensus 77 ~~~~vLdiG~G~G~~~~~la~~~-~~v~~vD~~~~~~-~~a~~~~~~~~~~-~v~~~~~d~~~~~~-------~~~~~D~ 146 (210)
T 3lbf_A 77 PQSRVLEIGTGSGYQTAILAHLV-QHVCSVERIKGLQ-WQARRRLKNLDLH-NVSTRHGDGWQGWQ-------ARAPFDA 146 (210)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHS-SEEEEEESCHHHH-HHHHHHHHHTTCC-SEEEEESCGGGCCG-------GGCCEEE
T ss_pred CCCEEEEEcCCCCHHHHHHHHhC-CEEEEEecCHHHH-HHHHHHHHHcCCC-ceEEEECCcccCCc-------cCCCccE
Confidence 57899999999999999888885 4799999999998 9999999999886 48999999877432 1368999
Q ss_pred EEEcCCCC
Q 022298 235 MSVTPPYT 242 (299)
Q Consensus 235 I~iDPPY~ 242 (299)
|+++....
T Consensus 147 i~~~~~~~ 154 (210)
T 3lbf_A 147 IIVTAAPP 154 (210)
T ss_dssp EEESSBCS
T ss_pred EEEccchh
Confidence 99986543
No 117
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.97 E-value=1.3e-09 Score=100.33 Aligned_cols=90 Identities=13% Similarity=0.079 Sum_probs=70.9
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcc
Q 022298 135 VVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVR 214 (299)
Q Consensus 135 ~Vrealfn~L~~~~~~~~~~~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D 214 (299)
.+.+.+.+.+.. .++ +|||+|||+|.++.+++.+|+ +|++||+|++++ +.+++|+.. ++++++++|
T Consensus 34 ~i~~~Iv~~~~~-------~~~-~VLEIG~G~G~lt~~L~~~~~-~V~avEid~~~~-~~l~~~~~~----~~v~vi~~D 99 (271)
T 3fut_A 34 AHLRRIVEAARP-------FTG-PVFEVGPGLGALTRALLEAGA-EVTAIEKDLRLR-PVLEETLSG----LPVRLVFQD 99 (271)
T ss_dssp HHHHHHHHHHCC-------CCS-CEEEECCTTSHHHHHHHHTTC-CEEEEESCGGGH-HHHHHHTTT----SSEEEEESC
T ss_pred HHHHHHHHhcCC-------CCC-eEEEEeCchHHHHHHHHHcCC-EEEEEECCHHHH-HHHHHhcCC----CCEEEEECC
Confidence 355666666643 246 999999999999999999985 699999999998 999998752 458999999
Q ss_pred hhhHHHHHhhhcCCCCCeeEEEEcCCCCCC
Q 022298 215 VETFLERAEQFVGKDGPFDYMSVTPPYTAV 244 (299)
Q Consensus 215 ~~~~l~~~~~~~~~~~~fDlI~iDPPY~~~ 244 (299)
+.++.-. ....+|.|+.|+||...
T Consensus 100 ~l~~~~~------~~~~~~~iv~NlPy~is 123 (271)
T 3fut_A 100 ALLYPWE------EVPQGSLLVANLPYHIA 123 (271)
T ss_dssp GGGSCGG------GSCTTEEEEEEECSSCC
T ss_pred hhhCChh------hccCccEEEecCccccc
Confidence 9876311 01368999999999863
No 118
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.97 E-value=1.3e-09 Score=101.63 Aligned_cols=90 Identities=14% Similarity=0.069 Sum_probs=71.1
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcc
Q 022298 135 VVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVR 214 (299)
Q Consensus 135 ~Vrealfn~L~~~~~~~~~~~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D 214 (299)
.+.+.+.+.+.. ..+.+|||+|||+|.++..++.++ .+|++||+|+.++ +.+++|++. . ++++++++|
T Consensus 37 ~i~~~Iv~~l~~-------~~~~~VLEIG~G~G~lT~~La~~~-~~V~aVEid~~li-~~a~~~~~~--~-~~v~vi~gD 104 (295)
T 3gru_A 37 NFVNKAVESANL-------TKDDVVLEIGLGKGILTEELAKNA-KKVYVIEIDKSLE-PYANKLKEL--Y-NNIEIIWGD 104 (295)
T ss_dssp HHHHHHHHHTTC-------CTTCEEEEECCTTSHHHHHHHHHS-SEEEEEESCGGGH-HHHHHHHHH--C-SSEEEEESC
T ss_pred HHHHHHHHhcCC-------CCcCEEEEECCCchHHHHHHHhcC-CEEEEEECCHHHH-HHHHHHhcc--C-CCeEEEECc
Confidence 455566565543 357899999999999999988885 4799999999998 999999873 2 358999999
Q ss_pred hhhHHHHHhhhcCCCCCeeEEEEcCCCCC
Q 022298 215 VETFLERAEQFVGKDGPFDYMSVTPPYTA 243 (299)
Q Consensus 215 ~~~~l~~~~~~~~~~~~fDlI~iDPPY~~ 243 (299)
+.++.- ....||.|+.|+||..
T Consensus 105 ~l~~~~-------~~~~fD~Iv~NlPy~i 126 (295)
T 3gru_A 105 ALKVDL-------NKLDFNKVVANLPYQI 126 (295)
T ss_dssp TTTSCG-------GGSCCSEEEEECCGGG
T ss_pred hhhCCc-------ccCCccEEEEeCcccc
Confidence 986421 1246999999999974
No 119
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=98.97 E-value=3e-09 Score=91.10 Aligned_cols=98 Identities=13% Similarity=0.184 Sum_probs=77.3
Q ss_pred CCCCHHHHHHHHHHHHHhcCCCCCCCCCCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcE
Q 022298 129 VRPMMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVS 208 (299)
Q Consensus 129 ~RPttd~Vrealfn~L~~~~~~~~~~~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~ 208 (299)
.+|..+.+.+.+.+.+.. ...+|||+|||+|.++..++.+...+|+++|+++.++ +.+++|++..+..+++
T Consensus 25 ~~~~~~~~~~~~~~~~~~--------~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~~-~~a~~~~~~~~~~~~~ 95 (219)
T 3dlc_A 25 FAPIYPIIAENIINRFGI--------TAGTCIDIGSGPGALSIALAKQSDFSIRALDFSKHMN-EIALKNIADANLNDRI 95 (219)
T ss_dssp TTTHHHHHHHHHHHHHCC--------CEEEEEEETCTTSHHHHHHHHHSEEEEEEEESCHHHH-HHHHHHHHHTTCTTTE
T ss_pred hccccHHHHHHHHHhcCC--------CCCEEEEECCCCCHHHHHHHHcCCCeEEEEECCHHHH-HHHHHHHHhccccCce
Confidence 456666666666665542 3349999999999999998887444799999999998 9999999999987779
Q ss_pred EEEEcchhhHHHHHhhhcCCCCCeeEEEEcCCCC
Q 022298 209 SIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYT 242 (299)
Q Consensus 209 ~vi~~D~~~~l~~~~~~~~~~~~fDlI~iDPPY~ 242 (299)
+++++|+.+.. ...++||+|+++....
T Consensus 96 ~~~~~d~~~~~-------~~~~~~D~v~~~~~l~ 122 (219)
T 3dlc_A 96 QIVQGDVHNIP-------IEDNYADLIVSRGSVF 122 (219)
T ss_dssp EEEECBTTBCS-------SCTTCEEEEEEESCGG
T ss_pred EEEEcCHHHCC-------CCcccccEEEECchHh
Confidence 99999987632 1246899999987644
No 120
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=98.96 E-value=4.6e-10 Score=104.24 Aligned_cols=80 Identities=16% Similarity=0.132 Sum_probs=63.9
Q ss_pred CCCEEEEECCccchHHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHHHhC---C-CCcEEEEEcchhhHHHHHhhhcCCC
Q 022298 155 RPGRWLDLYSGTGSVGIEAISR-GCSEVHFVEMDPWVVSNVLIPNLEWTG---F-LDVSSIHTVRVETFLERAEQFVGKD 229 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSr-Ga~~V~~VD~n~~Al~~~a~~N~~~~g---~-~~~~~vi~~D~~~~l~~~~~~~~~~ 229 (299)
...+|||+|||+|.++.+++.. +..+|++||+|+.++ +.+++|+...+ + ..+++++.+|+.+++.. ..
T Consensus 83 ~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi-~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~------~~ 155 (294)
T 3adn_A 83 HAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVV-SFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQ------TS 155 (294)
T ss_dssp TCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHH-HHHHHHCHHHHSSCTTCTTCCEECSCSCC---C------CC
T ss_pred CCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHH-HHHHHhhhhcccccccCCceEEEEChHHHHHhh------cC
Confidence 4689999999999999999886 567899999999998 99999987653 2 24688999999888642 24
Q ss_pred CCeeEEEEcCCC
Q 022298 230 GPFDYMSVTPPY 241 (299)
Q Consensus 230 ~~fDlI~iDPPY 241 (299)
++||+|++|+|.
T Consensus 156 ~~fDvIi~D~~~ 167 (294)
T 3adn_A 156 QTFDVIISDCTD 167 (294)
T ss_dssp CCEEEEEECC--
T ss_pred CCccEEEECCCC
Confidence 689999999874
No 121
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=98.96 E-value=4.8e-09 Score=94.89 Aligned_cols=76 Identities=17% Similarity=0.164 Sum_probs=66.6
Q ss_pred CCCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCeeE
Q 022298 155 RPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDY 234 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fDl 234 (299)
.+.+|||+|||+|.+++.++.+|+ +|+++|+|+.++ +.+++|+..++. +++++++|+.+.. ..++||+
T Consensus 120 ~~~~vLD~GcG~G~~~~~l~~~g~-~v~~vD~s~~~~-~~a~~~~~~~~~--~~~~~~~d~~~~~--------~~~~fD~ 187 (286)
T 3m70_A 120 SPCKVLDLGCGQGRNSLYLSLLGY-DVTSWDHNENSI-AFLNETKEKENL--NISTALYDINAAN--------IQENYDF 187 (286)
T ss_dssp CSCEEEEESCTTCHHHHHHHHTTC-EEEEEESCHHHH-HHHHHHHHHTTC--CEEEEECCGGGCC--------CCSCEEE
T ss_pred CCCcEEEECCCCCHHHHHHHHCCC-eEEEEECCHHHH-HHHHHHHHHcCC--ceEEEEecccccc--------ccCCccE
Confidence 578999999999999999999987 799999999998 999999999887 4899999987642 1478999
Q ss_pred EEEcCCCC
Q 022298 235 MSVTPPYT 242 (299)
Q Consensus 235 I~iDPPY~ 242 (299)
|+++.++.
T Consensus 188 i~~~~~~~ 195 (286)
T 3m70_A 188 IVSTVVFM 195 (286)
T ss_dssp EEECSSGG
T ss_pred EEEccchh
Confidence 99988764
No 122
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=98.96 E-value=5.5e-09 Score=92.47 Aligned_cols=79 Identities=15% Similarity=0.103 Sum_probs=66.4
Q ss_pred CCCEEEEECCccchHHHHHHHc-C-CCEEEEEeCCHHHHHHHHHHHHHHh-CCCCcEEEEEcchhhHHHHHhhhcCCCCC
Q 022298 155 RPGRWLDLYSGTGSVGIEAISR-G-CSEVHFVEMDPWVVSNVLIPNLEWT-GFLDVSSIHTVRVETFLERAEQFVGKDGP 231 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSr-G-a~~V~~VD~n~~Al~~~a~~N~~~~-g~~~~~~vi~~D~~~~l~~~~~~~~~~~~ 231 (299)
.+.+|||+|||+|.+++.++.. | ..+|+++|+++.++ +.+++|++.+ + .++++++++|+.+.. ...+.
T Consensus 96 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~-~~a~~~~~~~~g-~~~v~~~~~d~~~~~-------~~~~~ 166 (258)
T 2pwy_A 96 PGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHL-AQAERNVRAFWQ-VENVRFHLGKLEEAE-------LEEAA 166 (258)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHH-HHHHHHHHHHCC-CCCEEEEESCGGGCC-------CCTTC
T ss_pred CCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHH-HHHHHHHHHhcC-CCCEEEEECchhhcC-------CCCCC
Confidence 5789999999999999998876 4 45899999999998 9999999988 7 456899999987651 12367
Q ss_pred eeEEEEcCCCC
Q 022298 232 FDYMSVTPPYT 242 (299)
Q Consensus 232 fDlI~iDPPY~ 242 (299)
||+|++|+|..
T Consensus 167 ~D~v~~~~~~~ 177 (258)
T 2pwy_A 167 YDGVALDLMEP 177 (258)
T ss_dssp EEEEEEESSCG
T ss_pred cCEEEECCcCH
Confidence 99999999865
No 123
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.94 E-value=1.4e-09 Score=97.84 Aligned_cols=91 Identities=15% Similarity=0.139 Sum_probs=68.5
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEc
Q 022298 134 EVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTV 213 (299)
Q Consensus 134 d~Vrealfn~L~~~~~~~~~~~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~ 213 (299)
..+.+.+.+.+.. ..+.+|||+|||+|.++.+++.+| .+|++||+|+.++ +.+++|++.. ++++++++
T Consensus 16 ~~~~~~i~~~~~~-------~~~~~VLDiG~G~G~lt~~l~~~~-~~v~~vD~~~~~~-~~a~~~~~~~---~~v~~~~~ 83 (244)
T 1qam_A 16 KHNIDKIMTNIRL-------NEHDNIFEIGSGKGHFTLELVQRC-NFVTAIEIDHKLC-KTTENKLVDH---DNFQVLNK 83 (244)
T ss_dssp HHHHHHHHTTCCC-------CTTCEEEEECCTTSHHHHHHHHHS-SEEEEECSCHHHH-HHHHHHTTTC---CSEEEECC
T ss_pred HHHHHHHHHhCCC-------CCCCEEEEEeCCchHHHHHHHHcC-CeEEEEECCHHHH-HHHHHhhccC---CCeEEEEC
Confidence 3455555554432 257899999999999999999988 5799999999998 9999997642 45899999
Q ss_pred chhhHHHHHhhhcCCCCCeeEEEEcCCCCC
Q 022298 214 RVETFLERAEQFVGKDGPFDYMSVTPPYTA 243 (299)
Q Consensus 214 D~~~~l~~~~~~~~~~~~fDlI~iDPPY~~ 243 (299)
|+.++.- .....| .|+.||||..
T Consensus 84 D~~~~~~------~~~~~~-~vv~nlPy~~ 106 (244)
T 1qam_A 84 DILQFKF------PKNQSY-KIFGNIPYNI 106 (244)
T ss_dssp CGGGCCC------CSSCCC-EEEEECCGGG
T ss_pred hHHhCCc------ccCCCe-EEEEeCCccc
Confidence 9887520 011345 6899999963
No 124
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=98.94 E-value=8.2e-09 Score=97.54 Aligned_cols=80 Identities=23% Similarity=0.294 Sum_probs=66.3
Q ss_pred CCCEEEEECCccchHHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHHHh--CC-CCcEEEEEcchhhHHHHHhhhcCCCC
Q 022298 155 RPGRWLDLYSGTGSVGIEAISR-GCSEVHFVEMDPWVVSNVLIPNLEWT--GF-LDVSSIHTVRVETFLERAEQFVGKDG 230 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSr-Ga~~V~~VD~n~~Al~~~a~~N~~~~--g~-~~~~~vi~~D~~~~l~~~~~~~~~~~ 230 (299)
.+.+|||+|||+|.++++++.+ +..+|++||+|+.++ +.+++|+..+ ++ ..+++++.+|+.+++... ..+
T Consensus 120 ~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l-~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~-----~~~ 193 (334)
T 1xj5_A 120 NPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVV-DVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNA-----AEG 193 (334)
T ss_dssp CCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHH-HHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTS-----CTT
T ss_pred CCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHH-HHHHHHHHhhccccCCCcEEEEECCHHHHHHhc-----cCC
Confidence 4689999999999999998876 456899999999998 9999998764 44 246999999999876431 136
Q ss_pred CeeEEEEcCC
Q 022298 231 PFDYMSVTPP 240 (299)
Q Consensus 231 ~fDlI~iDPP 240 (299)
+||+|++|++
T Consensus 194 ~fDlIi~d~~ 203 (334)
T 1xj5_A 194 SYDAVIVDSS 203 (334)
T ss_dssp CEEEEEECCC
T ss_pred CccEEEECCC
Confidence 8999999987
No 125
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=98.93 E-value=3.5e-09 Score=91.84 Aligned_cols=96 Identities=10% Similarity=0.049 Sum_probs=73.7
Q ss_pred CCHHHHHHHHHHHHHhcCCCCCCCCCCEEEEECCccchHHHHHHHcCC-CEEEEEeCCHHHHHHHHHHHHHHhCCCC---
Q 022298 131 PMMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGC-SEVHFVEMDPWVVSNVLIPNLEWTGFLD--- 206 (299)
Q Consensus 131 Pttd~Vrealfn~L~~~~~~~~~~~~~~VLDLfaGSGalgIEAlSrGa-~~V~~VD~n~~Al~~~a~~N~~~~g~~~--- 206 (299)
|......+.+.+.+.. ..+.+|||+|||+|.++..++.++. .+|+++|+|+.++ +.+++|++..++.+
T Consensus 12 ~~~~~~~~~l~~~l~~-------~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~-~~a~~~~~~~~~~~~~~ 83 (217)
T 3jwh_A 12 SLNQQRMNGVVAALKQ-------SNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSL-EIAQERLDRLRLPRNQW 83 (217)
T ss_dssp CHHHHHHHHHHHHHHH-------TTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHH-HHHHHHHTTCCCCHHHH
T ss_pred CHHHHHHHHHHHHHHh-------cCCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHH-HHHHHHHHHhcCCcccC
Confidence 3344455666677764 3578999999999999999888753 5899999999998 99999998877753
Q ss_pred -cEEEEEcchhhHHHHHhhhcCCCCCeeEEEEcCCC
Q 022298 207 -VSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPY 241 (299)
Q Consensus 207 -~~~vi~~D~~~~l~~~~~~~~~~~~fDlI~iDPPY 241 (299)
+++++++|+.... ...++||+|++.-..
T Consensus 84 ~~v~~~~~d~~~~~-------~~~~~fD~v~~~~~l 112 (217)
T 3jwh_A 84 ERLQLIQGALTYQD-------KRFHGYDAATVIEVI 112 (217)
T ss_dssp TTEEEEECCTTSCC-------GGGCSCSEEEEESCG
T ss_pred cceEEEeCCccccc-------ccCCCcCEEeeHHHH
Confidence 6899999975321 113689999986543
No 126
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=98.92 E-value=3.4e-09 Score=102.73 Aligned_cols=81 Identities=17% Similarity=0.215 Sum_probs=68.0
Q ss_pred CCCEEEEECCccchHHHHHHHcCC-CEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCee
Q 022298 155 RPGRWLDLYSGTGSVGIEAISRGC-SEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFD 233 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSrGa-~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fD 233 (299)
++.+|||+|||+|..++.++..+. .+|+++|+++.++ +.+++|++.+|+. ++++++|+.++.... ..+.||
T Consensus 246 ~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l-~~~~~~~~~~g~~--~~~~~~D~~~~~~~~-----~~~~fD 317 (429)
T 1sqg_A 246 NGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRL-SRVYDNLKRLGMK--ATVKQGDGRYPSQWC-----GEQQFD 317 (429)
T ss_dssp TTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTH-HHHHHHHHHTTCC--CEEEECCTTCTHHHH-----TTCCEE
T ss_pred CcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHH-HHHHHHHHHcCCC--eEEEeCchhhchhhc-----ccCCCC
Confidence 578999999999999999887643 5899999999998 9999999999873 678999988764322 136899
Q ss_pred EEEEcCCCCC
Q 022298 234 YMSVTPPYTA 243 (299)
Q Consensus 234 lI~iDPPY~~ 243 (299)
+|++||||..
T Consensus 318 ~Vl~D~Pcsg 327 (429)
T 1sqg_A 318 RILLDAPCSA 327 (429)
T ss_dssp EEEEECCCCC
T ss_pred EEEEeCCCCc
Confidence 9999999964
No 127
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=98.92 E-value=9.5e-09 Score=91.05 Aligned_cols=82 Identities=12% Similarity=0.091 Sum_probs=68.3
Q ss_pred CCCEEEEECCccchHHHHHHHc-C-CCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCC--C
Q 022298 155 RPGRWLDLYSGTGSVGIEAISR-G-CSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKD--G 230 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSr-G-a~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~--~ 230 (299)
.+.+|||+|||+|..++.++.. + ..+|+++|+++.++ +.+++|++..++.++++++.+|+.+.+.... ... +
T Consensus 72 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~-~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~---~~~~~~ 147 (232)
T 3cbg_A 72 GAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNAT-AIAKKYWQKAGVAEKISLRLGPALATLEQLT---QGKPLP 147 (232)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHH-HHHHHHHHHHTCGGGEEEEESCHHHHHHHHH---TSSSCC
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHH-HHHHHHHHHcCCCCcEEEEEcCHHHHHHHHH---hcCCCC
Confidence 4679999999999999987764 2 34899999999998 9999999999987789999999988765431 112 6
Q ss_pred CeeEEEEcCC
Q 022298 231 PFDYMSVTPP 240 (299)
Q Consensus 231 ~fDlI~iDPP 240 (299)
.||+||+|.+
T Consensus 148 ~fD~V~~d~~ 157 (232)
T 3cbg_A 148 EFDLIFIDAD 157 (232)
T ss_dssp CEEEEEECSC
T ss_pred CcCEEEECCC
Confidence 8999999987
No 128
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.92 E-value=2e-09 Score=97.59 Aligned_cols=91 Identities=15% Similarity=0.119 Sum_probs=69.5
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEc
Q 022298 134 EVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTV 213 (299)
Q Consensus 134 d~Vrealfn~L~~~~~~~~~~~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~ 213 (299)
..+.+.+.+.+.. .++.+|||+|||+|.++.+++.+|+.+|++||+|+.++ +.+++| + .++++++++
T Consensus 17 ~~i~~~iv~~~~~-------~~~~~VLDiG~G~G~lt~~L~~~~~~~v~avEid~~~~-~~~~~~----~-~~~v~~i~~ 83 (249)
T 3ftd_A 17 EGVLKKIAEELNI-------EEGNTVVEVGGGTGNLTKVLLQHPLKKLYVIELDREMV-ENLKSI----G-DERLEVINE 83 (249)
T ss_dssp HHHHHHHHHHTTC-------CTTCEEEEEESCHHHHHHHHTTSCCSEEEEECCCHHHH-HHHTTS----C-CTTEEEECS
T ss_pred HHHHHHHHHhcCC-------CCcCEEEEEcCchHHHHHHHHHcCCCeEEEEECCHHHH-HHHHhc----c-CCCeEEEEc
Confidence 3466666666543 35789999999999999999888877899999999998 899888 2 245899999
Q ss_pred chhhHHHHHhhhcCCCCCeeEEEEcCCCCC
Q 022298 214 RVETFLERAEQFVGKDGPFDYMSVTPPYTA 243 (299)
Q Consensus 214 D~~~~l~~~~~~~~~~~~fDlI~iDPPY~~ 243 (299)
|+.++.- ......| .|+.||||..
T Consensus 84 D~~~~~~-----~~~~~~~-~vv~NlPy~i 107 (249)
T 3ftd_A 84 DASKFPF-----CSLGKEL-KVVGNLPYNV 107 (249)
T ss_dssp CTTTCCG-----GGSCSSE-EEEEECCTTT
T ss_pred chhhCCh-----hHccCCc-EEEEECchhc
Confidence 9987521 0111234 8999999985
No 129
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.91 E-value=1.1e-08 Score=88.56 Aligned_cols=75 Identities=19% Similarity=0.180 Sum_probs=64.0
Q ss_pred CCCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCeeE
Q 022298 155 RPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDY 234 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fDl 234 (299)
.+.+|||+|||+|.++..++.+|. +++++|+|+.++ +.+++|.+.++ .+++++++|+.++. ...++||+
T Consensus 38 ~~~~vLDlG~G~G~~~~~l~~~~~-~v~~vD~s~~~~-~~a~~~~~~~~--~~~~~~~~d~~~~~-------~~~~~~D~ 106 (227)
T 1ve3_A 38 KRGKVLDLACGVGGFSFLLEDYGF-EVVGVDISEDMI-RKAREYAKSRE--SNVEFIVGDARKLS-------FEDKTFDY 106 (227)
T ss_dssp SCCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHH-HHHHHHHHHTT--CCCEEEECCTTSCC-------SCTTCEEE
T ss_pred CCCeEEEEeccCCHHHHHHHHcCC-EEEEEECCHHHH-HHHHHHHHhcC--CCceEEECchhcCC-------CCCCcEEE
Confidence 378999999999999998888887 899999999998 99999998877 35789999987631 12468999
Q ss_pred EEEcCC
Q 022298 235 MSVTPP 240 (299)
Q Consensus 235 I~iDPP 240 (299)
|+++++
T Consensus 107 v~~~~~ 112 (227)
T 1ve3_A 107 VIFIDS 112 (227)
T ss_dssp EEEESC
T ss_pred EEEcCc
Confidence 999999
No 130
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=98.91 E-value=5.9e-09 Score=91.34 Aligned_cols=79 Identities=8% Similarity=0.034 Sum_probs=64.6
Q ss_pred CCCEEEEECCccchHHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCee
Q 022298 155 RPGRWLDLYSGTGSVGIEAISR-GCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFD 233 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSr-Ga~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fD 233 (299)
.+.+|||+|||+|.++++++.+ ...+|++||+++.++ +.+++|++..++.+ ++++++|+.++.... ..+.||
T Consensus 38 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l-~~a~~~~~~~~~~n-v~~~~~d~~~l~~~~-----~~~~~d 110 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVI-VTAVQKVKDSEAQN-VKLLNIDADTLTDVF-----EPGEVK 110 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHH-HHHHHHHHHSCCSS-EEEECCCGGGHHHHC-----CTTSCC
T ss_pred CCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHH-HHHHHHHHHcCCCC-EEEEeCCHHHHHhhc-----CcCCcC
Confidence 4679999999999999998776 245799999999998 99999999998854 899999998753221 246799
Q ss_pred EEEEcCC
Q 022298 234 YMSVTPP 240 (299)
Q Consensus 234 lI~iDPP 240 (299)
.|+++.|
T Consensus 111 ~v~~~~~ 117 (213)
T 2fca_A 111 RVYLNFS 117 (213)
T ss_dssp EEEEESC
T ss_pred EEEEECC
Confidence 9998643
No 131
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=98.90 E-value=4.4e-09 Score=93.79 Aligned_cols=78 Identities=17% Similarity=0.081 Sum_probs=63.5
Q ss_pred CCCEEEEECCccchHHHHHHHcCCC-EEEEEeCCHHHHHHHHHHHHHHh--------CCCCcEEEEEcchhhHHHHHhhh
Q 022298 155 RPGRWLDLYSGTGSVGIEAISRGCS-EVHFVEMDPWVVSNVLIPNLEWT--------GFLDVSSIHTVRVETFLERAEQF 225 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSrGa~-~V~~VD~n~~Al~~~a~~N~~~~--------g~~~~~~vi~~D~~~~l~~~~~~ 225 (299)
.+.+|||+|||+|.++++++.++.. .|++||+++.++ +.+++|++.+ ++. +++++++|+.+++...
T Consensus 49 ~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l-~~a~~~~~~~~~~~~~~~~~~-nv~~~~~D~~~~l~~~--- 123 (246)
T 2vdv_E 49 KKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVT-NYVEDRIIALRNNTASKHGFQ-NINVLRGNAMKFLPNF--- 123 (246)
T ss_dssp CCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHH-HHHHHHHHHHHHTC-CCSTTT-TEEEEECCTTSCGGGT---
T ss_pred CCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHH-HHHHHHHHHHhhccccccCCC-cEEEEeccHHHHHHHh---
Confidence 4679999999999999999888743 899999999998 9999999887 765 4899999998755321
Q ss_pred cCCCCCeeEEEEc
Q 022298 226 VGKDGPFDYMSVT 238 (299)
Q Consensus 226 ~~~~~~fDlI~iD 238 (299)
...+.+|.|+++
T Consensus 124 -~~~~~~d~v~~~ 135 (246)
T 2vdv_E 124 -FEKGQLSKMFFC 135 (246)
T ss_dssp -SCTTCEEEEEEE
T ss_pred -ccccccCEEEEE
Confidence 124678988765
No 132
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=98.90 E-value=2.5e-09 Score=100.26 Aligned_cols=80 Identities=23% Similarity=0.272 Sum_probs=66.4
Q ss_pred CCCEEEEECCccchHHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHHHh--CC-CCcEEEEEcchhhHHHHHhhhcCCCC
Q 022298 155 RPGRWLDLYSGTGSVGIEAISR-GCSEVHFVEMDPWVVSNVLIPNLEWT--GF-LDVSSIHTVRVETFLERAEQFVGKDG 230 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSr-Ga~~V~~VD~n~~Al~~~a~~N~~~~--g~-~~~~~vi~~D~~~~l~~~~~~~~~~~ 230 (299)
.+.+|||+|||+|.++.+++.+ +..+|++||+|+.++ +.+++|+..+ ++ .++++++.+|+.+++... .+
T Consensus 108 ~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i-~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~------~~ 180 (314)
T 2b2c_A 108 DPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVI-DVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNH------KN 180 (314)
T ss_dssp SCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHH-HHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHC------TT
T ss_pred CCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHH-HHHHHHHHHhccccCCCCEEEEEChHHHHHHhc------CC
Confidence 4679999999999999998876 456899999999998 9999998654 33 357999999999887542 46
Q ss_pred CeeEEEEcCCC
Q 022298 231 PFDYMSVTPPY 241 (299)
Q Consensus 231 ~fDlI~iDPPY 241 (299)
+||+|++|++.
T Consensus 181 ~fD~Ii~d~~~ 191 (314)
T 2b2c_A 181 EFDVIITDSSD 191 (314)
T ss_dssp CEEEEEECCC-
T ss_pred CceEEEEcCCC
Confidence 89999999963
No 133
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=98.90 E-value=6e-09 Score=96.76 Aligned_cols=94 Identities=16% Similarity=0.032 Sum_probs=74.9
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCCEEEEECCccchHHHHHHHcCC--CEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEE
Q 022298 134 EVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGC--SEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIH 211 (299)
Q Consensus 134 d~Vrealfn~L~~~~~~~~~~~~~~VLDLfaGSGalgIEAlSrGa--~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi 211 (299)
..+...+...+.. .++.+|||+|||+|.+++.++.++. .+|+++|+++.++ +.+++|++.+++.+ ++++
T Consensus 61 ~~~~~~l~~~l~~-------~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~-~~a~~~~~~~g~~~-v~~~ 131 (317)
T 1dl5_A 61 PSLMALFMEWVGL-------DKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKIC-EIAKRNVERLGIEN-VIFV 131 (317)
T ss_dssp HHHHHHHHHHTTC-------CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHH-HHHHHHHHHTTCCS-EEEE
T ss_pred HHHHHHHHHhcCC-------CCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHH-HHHHHHHHHcCCCC-eEEE
Confidence 3444555555542 3578999999999999999887653 4699999999998 99999999999876 8999
Q ss_pred EcchhhHHHHHhhhcCCCCCeeEEEEcCCCCC
Q 022298 212 TVRVETFLERAEQFVGKDGPFDYMSVTPPYTA 243 (299)
Q Consensus 212 ~~D~~~~l~~~~~~~~~~~~fDlI~iDPPY~~ 243 (299)
.+|+.+... ..++||+|+++++...
T Consensus 132 ~~d~~~~~~-------~~~~fD~Iv~~~~~~~ 156 (317)
T 1dl5_A 132 CGDGYYGVP-------EFSPYDVIFVTVGVDE 156 (317)
T ss_dssp ESCGGGCCG-------GGCCEEEEEECSBBSC
T ss_pred ECChhhccc-------cCCCeEEEEEcCCHHH
Confidence 999877432 1368999999999865
No 134
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=98.90 E-value=5.7e-09 Score=92.05 Aligned_cols=71 Identities=13% Similarity=0.082 Sum_probs=57.7
Q ss_pred CCCEEEEECCccchHHHHHHHc--CCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCe
Q 022298 155 RPGRWLDLYSGTGSVGIEAISR--GCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPF 232 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSr--Ga~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~f 232 (299)
...+|||+|||+|.+++..+.. ++ +++++|+|+.++ +++++|+..+|..+++++ .|..... ..++|
T Consensus 49 ~~~~VLDlGCG~GplAl~l~~~~p~a-~~~A~Di~~~~l-eiar~~~~~~g~~~~v~~--~d~~~~~--------~~~~~ 116 (200)
T 3fzg_A 49 HVSSILDFGCGFNPLALYQWNENEKI-IYHAYDIDRAEI-AFLSSIIGKLKTTIKYRF--LNKESDV--------YKGTY 116 (200)
T ss_dssp CCSEEEEETCTTHHHHHHHHCSSCCC-EEEEECSCHHHH-HHHHHHHHHSCCSSEEEE--ECCHHHH--------TTSEE
T ss_pred CCCeEEEecCCCCHHHHHHHhcCCCC-EEEEEeCCHHHH-HHHHHHHHhcCCCccEEE--ecccccC--------CCCCc
Confidence 4679999999999999987665 56 899999999998 999999999998765655 5554322 24679
Q ss_pred eEEEE
Q 022298 233 DYMSV 237 (299)
Q Consensus 233 DlI~i 237 (299)
|+|++
T Consensus 117 DvVLa 121 (200)
T 3fzg_A 117 DVVFL 121 (200)
T ss_dssp EEEEE
T ss_pred ChhhH
Confidence 99885
No 135
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=98.90 E-value=1.3e-08 Score=92.69 Aligned_cols=74 Identities=5% Similarity=-0.014 Sum_probs=62.9
Q ss_pred CCCEEEEECCccchHHHHHHHcC---CCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCC
Q 022298 155 RPGRWLDLYSGTGSVGIEAISRG---CSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGP 231 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSrG---a~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~ 231 (299)
++.+|||+|||+|.+++.++.+. ..+|++||+++.++ +.++++++..+...+++++++|+.++- .+.
T Consensus 70 ~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml-~~A~~~~~~~~~~~~v~~~~~D~~~~~---------~~~ 139 (261)
T 4gek_A 70 PGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMI-ERCRRHIDAYKAPTPVDVIEGDIRDIA---------IEN 139 (261)
T ss_dssp TTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHH-HHHHHHHHTSCCSSCEEEEESCTTTCC---------CCS
T ss_pred CCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHH-HHHHHHHHhhccCceEEEeeccccccc---------ccc
Confidence 58899999999999999887752 12799999999998 999999999888778999999987641 367
Q ss_pred eeEEEEc
Q 022298 232 FDYMSVT 238 (299)
Q Consensus 232 fDlI~iD 238 (299)
||+|++.
T Consensus 140 ~d~v~~~ 146 (261)
T 4gek_A 140 ASMVVLN 146 (261)
T ss_dssp EEEEEEE
T ss_pred cccceee
Confidence 9999875
No 136
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=98.89 E-value=4.5e-09 Score=98.07 Aligned_cols=82 Identities=20% Similarity=0.251 Sum_probs=67.9
Q ss_pred CCCEEEEECCccchHHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHHHh--C-C-CCcEEEEEcchhhHHHHHhhhcCCC
Q 022298 155 RPGRWLDLYSGTGSVGIEAISR-GCSEVHFVEMDPWVVSNVLIPNLEWT--G-F-LDVSSIHTVRVETFLERAEQFVGKD 229 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSr-Ga~~V~~VD~n~~Al~~~a~~N~~~~--g-~-~~~~~vi~~D~~~~l~~~~~~~~~~ 229 (299)
.+.+|||+|||+|.++.+++.+ +..+|++||+|+.++ +.+++|+... + + ..+++++.+|+.+++... .
T Consensus 77 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i-~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~------~ 149 (314)
T 1uir_A 77 EPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELV-EVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERT------E 149 (314)
T ss_dssp CCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHH-HHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHC------C
T ss_pred CCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHH-HHHHHHhHhhccccccCCceEEEEchHHHHHHhc------C
Confidence 4689999999999999998876 466899999999998 9999998752 2 2 356999999999886542 4
Q ss_pred CCeeEEEEcCCCCC
Q 022298 230 GPFDYMSVTPPYTA 243 (299)
Q Consensus 230 ~~fDlI~iDPPY~~ 243 (299)
++||+|++|++...
T Consensus 150 ~~fD~Ii~d~~~~~ 163 (314)
T 1uir_A 150 ERYDVVIIDLTDPV 163 (314)
T ss_dssp CCEEEEEEECCCCB
T ss_pred CCccEEEECCCCcc
Confidence 68999999998643
No 137
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=98.89 E-value=1.5e-08 Score=89.74 Aligned_cols=85 Identities=11% Similarity=-0.043 Sum_probs=67.9
Q ss_pred CCCEEEEECCccchHHHHHHHcC--CCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhh-------
Q 022298 155 RPGRWLDLYSGTGSVGIEAISRG--CSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQF------- 225 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSrG--a~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~------- 225 (299)
.+.+|||+|||+|..++.++.+. ..+|+++|+++.++ +.+++|++..++.++++++.+|+.+.+.....-
T Consensus 60 ~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~-~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~~~ 138 (239)
T 2hnk_A 60 GAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWT-NVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAPSWA 138 (239)
T ss_dssp TCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHH-HHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSCCGGG
T ss_pred CcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHH-HHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhccccccc
Confidence 46799999999999999888762 45899999999998 999999999998777999999998865432100
Q ss_pred -cCC-C-CCeeEEEEcCC
Q 022298 226 -VGK-D-GPFDYMSVTPP 240 (299)
Q Consensus 226 -~~~-~-~~fDlI~iDPP 240 (299)
... . +.||+||+|..
T Consensus 139 ~~f~~~~~~fD~I~~~~~ 156 (239)
T 2hnk_A 139 SDFAFGPSSIDLFFLDAD 156 (239)
T ss_dssp TTTCCSTTCEEEEEECSC
T ss_pred ccccCCCCCcCEEEEeCC
Confidence 000 1 67999999964
No 138
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=98.89 E-value=8.7e-09 Score=96.06 Aligned_cols=84 Identities=15% Similarity=0.067 Sum_probs=64.6
Q ss_pred CCCCEEEEECCccchHHHHHHHc-CC-CEEEEEeCCHHHHHHHHHHHHHHhC----------CCCcEEEEEcchhhHHHH
Q 022298 154 LRPGRWLDLYSGTGSVGIEAISR-GC-SEVHFVEMDPWVVSNVLIPNLEWTG----------FLDVSSIHTVRVETFLER 221 (299)
Q Consensus 154 ~~~~~VLDLfaGSGalgIEAlSr-Ga-~~V~~VD~n~~Al~~~a~~N~~~~g----------~~~~~~vi~~D~~~~l~~ 221 (299)
.++.+|||+|||+|.+++.++.. |. .+|+++|+++.++ +.+++|++.++ ..++++++.+|+.+....
T Consensus 104 ~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~-~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~~~ 182 (336)
T 2b25_A 104 NPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHH-DLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGATED 182 (336)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHH-HHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC--
T ss_pred CCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHH-HHHHHHHHHhhcccccccccccCCceEEEECChHHcccc
Confidence 35789999999999999998876 65 6899999999998 99999998643 234689999998875321
Q ss_pred HhhhcCCCCCeeEEEEcCCCCC
Q 022298 222 AEQFVGKDGPFDYMSVTPPYTA 243 (299)
Q Consensus 222 ~~~~~~~~~~fDlI~iDPPY~~ 243 (299)
. ..+.||+|++|+|-..
T Consensus 183 ~-----~~~~fD~V~~~~~~~~ 199 (336)
T 2b25_A 183 I-----KSLTFDAVALDMLNPH 199 (336)
T ss_dssp ----------EEEEEECSSSTT
T ss_pred c-----CCCCeeEEEECCCCHH
Confidence 1 1357999999987543
No 139
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=98.89 E-value=4.9e-09 Score=90.90 Aligned_cols=96 Identities=14% Similarity=0.105 Sum_probs=73.3
Q ss_pred CCCHHHHHHHHHHHHHhcCCCCCCCCCCEEEEECCccchHHHHHHHcCC-CEEEEEeCCHHHHHHHHHHHHHHhCCCC--
Q 022298 130 RPMMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGC-SEVHFVEMDPWVVSNVLIPNLEWTGFLD-- 206 (299)
Q Consensus 130 RPttd~Vrealfn~L~~~~~~~~~~~~~~VLDLfaGSGalgIEAlSrGa-~~V~~VD~n~~Al~~~a~~N~~~~g~~~-- 206 (299)
.|......+.+...+.. ..+.+|||+|||+|.++..++.++. .+|+++|+|+.++ +.+++|+...++.+
T Consensus 11 ~~~~~~~~~~l~~~l~~-------~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~-~~a~~~~~~~~~~~~~ 82 (219)
T 3jwg_A 11 LNLNQQRLGTVVAVLKS-------VNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVL-ERAKDRLKIDRLPEMQ 82 (219)
T ss_dssp -CHHHHHHHHHHHHHHH-------TTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHH-HHHHHHHTGGGSCHHH
T ss_pred CcchHHHHHHHHHHHhh-------cCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHH-HHHHHHHHhhcccccc
Confidence 45555556666677664 3578999999999999998888763 5899999999998 99999998877653
Q ss_pred --cEEEEEcchhhHHHHHhhhcCCCCCeeEEEEcCC
Q 022298 207 --VSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPP 240 (299)
Q Consensus 207 --~~~vi~~D~~~~l~~~~~~~~~~~~fDlI~iDPP 240 (299)
+++++++|+.... ...++||+|++.-.
T Consensus 83 ~~~v~~~~~d~~~~~-------~~~~~fD~V~~~~~ 111 (219)
T 3jwg_A 83 RKRISLFQSSLVYRD-------KRFSGYDAATVIEV 111 (219)
T ss_dssp HTTEEEEECCSSSCC-------GGGTTCSEEEEESC
T ss_pred CcceEEEeCcccccc-------cccCCCCEEEEHHH
Confidence 6899999975321 11368999997543
No 140
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=98.88 E-value=2.8e-09 Score=94.12 Aligned_cols=76 Identities=17% Similarity=0.044 Sum_probs=63.2
Q ss_pred CCCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCeeE
Q 022298 155 RPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDY 234 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fDl 234 (299)
.+.+|||+|||+|.+++.++..+..+|+++|+++.++ +.+++|.+..+ .+++++++|+.+.+.. ...+.||+
T Consensus 60 ~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~l-~~a~~~~~~~~--~~v~~~~~d~~~~~~~-----~~~~~fD~ 131 (236)
T 1zx0_A 60 KGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVF-QRLRDWAPRQT--HKVIPLKGLWEDVAPT-----LPDGHFDG 131 (236)
T ss_dssp TCEEEEEECCTTSHHHHHHHTSCEEEEEEEECCHHHH-HHHHHHGGGCS--SEEEEEESCHHHHGGG-----SCTTCEEE
T ss_pred CCCeEEEEeccCCHHHHHHHhcCCCeEEEEcCCHHHH-HHHHHHHHhcC--CCeEEEecCHHHhhcc-----cCCCceEE
Confidence 4789999999999999988776766899999999998 99999988766 3588999999876421 12468999
Q ss_pred EEEc
Q 022298 235 MSVT 238 (299)
Q Consensus 235 I~iD 238 (299)
|++|
T Consensus 132 V~~d 135 (236)
T 1zx0_A 132 ILYD 135 (236)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 9996
No 141
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=98.88 E-value=4.3e-09 Score=93.73 Aligned_cols=80 Identities=16% Similarity=0.022 Sum_probs=65.9
Q ss_pred CCCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCeeE
Q 022298 155 RPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDY 234 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fDl 234 (299)
.+.+|||+|||+|..+..+++++..++++||+|+.++ +.++++.+..+. +++++.+|+...+... ..+.||.
T Consensus 60 ~G~rVLdiG~G~G~~~~~~~~~~~~~v~~id~~~~~~-~~a~~~~~~~~~--~~~~~~~~a~~~~~~~-----~~~~FD~ 131 (236)
T 3orh_A 60 KGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVF-QRLRDWAPRQTH--KVIPLKGLWEDVAPTL-----PDGHFDG 131 (236)
T ss_dssp TCEEEEEECCTTSHHHHHHTTSCEEEEEEEECCHHHH-HHHHHHGGGCSS--EEEEEESCHHHHGGGS-----CTTCEEE
T ss_pred CCCeEEEECCCccHHHHHHHHhCCcEEEEEeCCHHHH-HHHHHHHhhCCC--ceEEEeehHHhhcccc-----cccCCce
Confidence 5889999999999999887777656899999999998 999999887664 4788999988765322 3578999
Q ss_pred EEEcCCCC
Q 022298 235 MSVTPPYT 242 (299)
Q Consensus 235 I~iDPPY~ 242 (299)
|+.|+...
T Consensus 132 i~~D~~~~ 139 (236)
T 3orh_A 132 ILYDTYPL 139 (236)
T ss_dssp EEECCCCC
T ss_pred EEEeeeec
Confidence 99998654
No 142
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=98.88 E-value=5.1e-09 Score=94.98 Aligned_cols=78 Identities=17% Similarity=0.166 Sum_probs=65.7
Q ss_pred CCCEEEEECCccchHHHHHHHc--CCCEEEEEeCCHHHHHHHHHHHHHHh-CCCCcEEEEEcchhhHHHHHhhhcCCCCC
Q 022298 155 RPGRWLDLYSGTGSVGIEAISR--GCSEVHFVEMDPWVVSNVLIPNLEWT-GFLDVSSIHTVRVETFLERAEQFVGKDGP 231 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSr--Ga~~V~~VD~n~~Al~~~a~~N~~~~-g~~~~~~vi~~D~~~~l~~~~~~~~~~~~ 231 (299)
.+.+|||+|||+|.+++.++.. +..+|+++|+++.++ +.+++|++.+ |. ++++++++|+.+.+ ..+.
T Consensus 110 ~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~-~~a~~~~~~~~g~-~~v~~~~~d~~~~~--------~~~~ 179 (275)
T 1yb2_A 110 PGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNL-KKAMDNLSEFYDI-GNVRTSRSDIADFI--------SDQM 179 (275)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHH-HHHHHHHHTTSCC-TTEEEECSCTTTCC--------CSCC
T ss_pred CcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHH-HHHHHHHHhcCCC-CcEEEEECchhccC--------cCCC
Confidence 5789999999999999988876 245899999999998 9999999988 75 45899999987642 2367
Q ss_pred eeEEEEcCCCC
Q 022298 232 FDYMSVTPPYT 242 (299)
Q Consensus 232 fDlI~iDPPY~ 242 (299)
||+|++|+|..
T Consensus 180 fD~Vi~~~~~~ 190 (275)
T 1yb2_A 180 YDAVIADIPDP 190 (275)
T ss_dssp EEEEEECCSCG
T ss_pred ccEEEEcCcCH
Confidence 99999999854
No 143
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=98.87 E-value=2.3e-08 Score=87.18 Aligned_cols=85 Identities=21% Similarity=0.140 Sum_probs=66.9
Q ss_pred CCCEEEEECCccchHHHHHHHcCC------CEEEEEeCCHHHHHHHHHHHHHHhCC----CCcEEEEEcchhhHHHHHhh
Q 022298 155 RPGRWLDLYSGTGSVGIEAISRGC------SEVHFVEMDPWVVSNVLIPNLEWTGF----LDVSSIHTVRVETFLERAEQ 224 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSrGa------~~V~~VD~n~~Al~~~a~~N~~~~g~----~~~~~vi~~D~~~~l~~~~~ 224 (299)
++.+|||+|||+|.+++.++..+. .+|+++|+++.++ +.+++|++.+++ .++++++.+|+.+......
T Consensus 80 ~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~-~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~- 157 (227)
T 2pbf_A 80 PGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLV-NFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEEK- 157 (227)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHH-HHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHHH-
T ss_pred CCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHH-HHHHHHHHHcCccccccCCEEEEECChHhcccccC-
Confidence 578999999999999998877643 4899999999998 999999999873 3458999999887431000
Q ss_pred hcCCCCCeeEEEEcCCCCC
Q 022298 225 FVGKDGPFDYMSVTPPYTA 243 (299)
Q Consensus 225 ~~~~~~~fDlI~iDPPY~~ 243 (299)
...++||+|+++.+...
T Consensus 158 --~~~~~fD~I~~~~~~~~ 174 (227)
T 2pbf_A 158 --KELGLFDAIHVGASASE 174 (227)
T ss_dssp --HHHCCEEEEEECSBBSS
T ss_pred --ccCCCcCEEEECCchHH
Confidence 00267999999998764
No 144
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=98.87 E-value=2.9e-09 Score=104.00 Aligned_cols=82 Identities=12% Similarity=0.023 Sum_probs=67.3
Q ss_pred CCCEEEEECCccchHHHHHHHc--CCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCe
Q 022298 155 RPGRWLDLYSGTGSVGIEAISR--GCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPF 232 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSr--Ga~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~f 232 (299)
.+.+|||+|||+|..++.++.+ +..+|+++|+++.++ +.+++|++.+|+.+ ++++++|+.++... ...+.|
T Consensus 259 ~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l-~~~~~~~~~~g~~~-v~~~~~D~~~~~~~-----~~~~~f 331 (450)
T 2yxl_A 259 PGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRM-KRLKDFVKRMGIKI-VKPLVKDARKAPEI-----IGEEVA 331 (450)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHH-HHHHHHHHHTTCCS-EEEECSCTTCCSSS-----SCSSCE
T ss_pred CcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHH-HHHHHHHHHcCCCc-EEEEEcChhhcchh-----hccCCC
Confidence 5789999999999999988764 335899999999998 99999999999864 88999998764211 012579
Q ss_pred eEEEEcCCCCC
Q 022298 233 DYMSVTPPYTA 243 (299)
Q Consensus 233 DlI~iDPPY~~ 243 (299)
|+|++|||+..
T Consensus 332 D~Vl~D~Pcsg 342 (450)
T 2yxl_A 332 DKVLLDAPCTS 342 (450)
T ss_dssp EEEEEECCCCC
T ss_pred CEEEEcCCCCC
Confidence 99999999954
No 145
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.86 E-value=2e-09 Score=108.03 Aligned_cols=101 Identities=15% Similarity=0.042 Sum_probs=76.1
Q ss_pred CCCCCHHHHHHHHHHHHHhcCCCCCCCCCCEEEEECCccchHHHHHHHc--------C--------CCEEEEEeCCHHHH
Q 022298 128 DVRPMMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISR--------G--------CSEVHFVEMDPWVV 191 (299)
Q Consensus 128 ~~RPttd~Vrealfn~L~~~~~~~~~~~~~~VLDLfaGSGalgIEAlSr--------G--------a~~V~~VD~n~~Al 191 (299)
+.-.|+..|.+.+.+++.. ...+|||+|||||++.++++.+ + ...++++|+|+.++
T Consensus 225 G~fyTP~~Vv~lmv~ll~p--------~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~ 296 (544)
T 3khk_A 225 GQYYTPKSIVTLIVEMLEP--------YKGRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTW 296 (544)
T ss_dssp TTTCCCHHHHHHHHHHHCC--------CSEEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHH
T ss_pred CeEeCCHHHHHHHHHHHhc--------CCCeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHH
Confidence 3456777777787777753 2349999999999999987532 0 24799999999998
Q ss_pred HHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCeeEEEEcCCCCC
Q 022298 192 SNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTA 243 (299)
Q Consensus 192 ~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fDlI~iDPPY~~ 243 (299)
++++.|+...|+...+.+.++|..... .....+||+|++||||..
T Consensus 297 -~lA~~Nl~l~gi~~~i~i~~gDtL~~~------~~~~~~fD~Iv~NPPf~~ 341 (544)
T 3khk_A 297 -KLAAMNMVIRGIDFNFGKKNADSFLDD------QHPDLRADFVMTNPPFNM 341 (544)
T ss_dssp -HHHHHHHHHTTCCCBCCSSSCCTTTSC------SCTTCCEEEEEECCCSSC
T ss_pred -HHHHHHHHHhCCCcccceeccchhcCc------ccccccccEEEECCCcCC
Confidence 999999999988655444778865421 012468999999999986
No 146
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=98.86 E-value=2e-08 Score=84.90 Aligned_cols=77 Identities=17% Similarity=0.236 Sum_probs=66.0
Q ss_pred CCCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCeeE
Q 022298 155 RPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDY 234 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fDl 234 (299)
.+.+|||+|||+|.+++.++.+|. +|+++|+++.++ +.+++|++..+..+ ++++++|+.+.. . .+.||+
T Consensus 32 ~~~~vLdiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~-~~a~~~~~~~~~~~-~~~~~~d~~~~~-------~-~~~~D~ 100 (199)
T 2xvm_A 32 KPGKTLDLGCGNGRNSLYLAANGY-DVDAWDKNAMSI-ANVERIKSIENLDN-LHTRVVDLNNLT-------F-DRQYDF 100 (199)
T ss_dssp CSCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHH-HHHHHHHHHHTCTT-EEEEECCGGGCC-------C-CCCEEE
T ss_pred CCCeEEEEcCCCCHHHHHHHHCCC-eEEEEECCHHHH-HHHHHHHHhCCCCC-cEEEEcchhhCC-------C-CCCceE
Confidence 577999999999999999888876 799999999998 99999999888754 889999987642 1 468999
Q ss_pred EEEcCCCC
Q 022298 235 MSVTPPYT 242 (299)
Q Consensus 235 I~iDPPY~ 242 (299)
|++...+.
T Consensus 101 v~~~~~l~ 108 (199)
T 2xvm_A 101 ILSTVVLM 108 (199)
T ss_dssp EEEESCGG
T ss_pred EEEcchhh
Confidence 99987654
No 147
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=98.85 E-value=1.4e-08 Score=87.75 Aligned_cols=80 Identities=15% Similarity=0.028 Sum_probs=66.5
Q ss_pred CCCEEEEECCccchHHHHHHHcCC--CEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCe
Q 022298 155 RPGRWLDLYSGTGSVGIEAISRGC--SEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPF 232 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSrGa--~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~f 232 (299)
.+.+|||+|||+|.+++.++..+. .+|+++|+++.++ +.+++|+..+++.+ ++++.+|+...+. ..+.|
T Consensus 77 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~-~~a~~~~~~~~~~~-v~~~~~d~~~~~~-------~~~~f 147 (215)
T 2yxe_A 77 PGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELA-EKAERTLRKLGYDN-VIVIVGDGTLGYE-------PLAPY 147 (215)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHH-HHHHHHHHHHTCTT-EEEEESCGGGCCG-------GGCCE
T ss_pred CCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHH-HHHHHHHHHcCCCC-eEEEECCcccCCC-------CCCCe
Confidence 578999999999999998887652 5899999999998 99999999988765 8899999854321 13679
Q ss_pred eEEEEcCCCCC
Q 022298 233 DYMSVTPPYTA 243 (299)
Q Consensus 233 DlI~iDPPY~~ 243 (299)
|+|+++.++..
T Consensus 148 D~v~~~~~~~~ 158 (215)
T 2yxe_A 148 DRIYTTAAGPK 158 (215)
T ss_dssp EEEEESSBBSS
T ss_pred eEEEECCchHH
Confidence 99999988764
No 148
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=98.85 E-value=2.3e-08 Score=92.67 Aligned_cols=83 Identities=17% Similarity=0.195 Sum_probs=65.1
Q ss_pred CCCEEEEECCccchHHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHHHh---CCCCcEEEEEcchhhHHHHHhhhcCCCC
Q 022298 155 RPGRWLDLYSGTGSVGIEAISR-GCSEVHFVEMDPWVVSNVLIPNLEWT---GFLDVSSIHTVRVETFLERAEQFVGKDG 230 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSr-Ga~~V~~VD~n~~Al~~~a~~N~~~~---g~~~~~~vi~~D~~~~l~~~~~~~~~~~ 230 (299)
.+.+|||+|||+|.++.+++.. +..+|++||+|+.++ +.+++|+..+ ....+++++.+|+.+++... ..+
T Consensus 95 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i-~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~-----~~~ 168 (304)
T 3bwc_A 95 KPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVM-EQSKQHFPQISRSLADPRATVRVGDGLAFVRQT-----PDN 168 (304)
T ss_dssp SCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHH-HHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSS-----CTT
T ss_pred CCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHH-HHHHHHhHHhhcccCCCcEEEEECcHHHHHHhc-----cCC
Confidence 4689999999999999998876 456899999999998 9999987432 12356899999998876421 246
Q ss_pred CeeEEEEcCCCCC
Q 022298 231 PFDYMSVTPPYTA 243 (299)
Q Consensus 231 ~fDlI~iDPPY~~ 243 (299)
+||+|++|+|...
T Consensus 169 ~fDvIi~d~~~~~ 181 (304)
T 3bwc_A 169 TYDVVIIDTTDPA 181 (304)
T ss_dssp CEEEEEEECC---
T ss_pred ceeEEEECCCCcc
Confidence 8999999997643
No 149
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=98.85 E-value=2.2e-08 Score=92.02 Aligned_cols=81 Identities=17% Similarity=0.227 Sum_probs=66.8
Q ss_pred CCCEEEEECCccchHHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHHHhC--C-CCcEEEEEcchhhHHHHHhhhcCCCC
Q 022298 155 RPGRWLDLYSGTGSVGIEAISR-GCSEVHFVEMDPWVVSNVLIPNLEWTG--F-LDVSSIHTVRVETFLERAEQFVGKDG 230 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSr-Ga~~V~~VD~n~~Al~~~a~~N~~~~g--~-~~~~~vi~~D~~~~l~~~~~~~~~~~ 230 (299)
.+.+|||+|||+|.++.+++.. +..+|++||+|+.++ +.+++|+..++ + ..+++++.+|+.+++... .+
T Consensus 78 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i-~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~------~~ 150 (283)
T 2i7c_A 78 EPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVI-EVSKIYFKNISCGYEDKRVNVFIEDASKFLENV------TN 150 (283)
T ss_dssp SCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHH-HHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHC------CS
T ss_pred CCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHH-HHHHHHhHHhccccCCCcEEEEECChHHHHHhC------CC
Confidence 4689999999999999998876 356899999999998 99999986542 2 356899999999887542 46
Q ss_pred CeeEEEEcCCCC
Q 022298 231 PFDYMSVTPPYT 242 (299)
Q Consensus 231 ~fDlI~iDPPY~ 242 (299)
+||+|++|++..
T Consensus 151 ~fD~Ii~d~~~~ 162 (283)
T 2i7c_A 151 TYDVIIVDSSDP 162 (283)
T ss_dssp CEEEEEEECCCT
T ss_pred CceEEEEcCCCC
Confidence 899999998643
No 150
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=98.85 E-value=3e-08 Score=90.53 Aligned_cols=75 Identities=16% Similarity=0.080 Sum_probs=66.2
Q ss_pred CCCEEEEECCccchHHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCee
Q 022298 155 RPGRWLDLYSGTGSVGIEAISR-GCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFD 233 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSr-Ga~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fD 233 (299)
++.+|||+|||+|.+++.++.+ | .+|+++|+++.++ +.+++|+...++.++++++.+|+.++ .+.||
T Consensus 72 ~~~~vLDiGcG~G~~~~~la~~~~-~~v~gvD~s~~~~-~~a~~~~~~~~~~~~v~~~~~d~~~~----------~~~fD 139 (302)
T 3hem_A 72 PGMTLLDIGCGWGSTMRHAVAEYD-VNVIGLTLSENQY-AHDKAMFDEVDSPRRKEVRIQGWEEF----------DEPVD 139 (302)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHC-CEEEEEECCHHHH-HHHHHHHHHSCCSSCEEEEECCGGGC----------CCCCS
T ss_pred CcCEEEEeeccCcHHHHHHHHhCC-CEEEEEECCHHHH-HHHHHHHHhcCCCCceEEEECCHHHc----------CCCcc
Confidence 5779999999999999998887 7 4799999999998 99999999999887899999998764 37899
Q ss_pred EEEEcCCC
Q 022298 234 YMSVTPPY 241 (299)
Q Consensus 234 lI~iDPPY 241 (299)
+|++.-.+
T Consensus 140 ~v~~~~~~ 147 (302)
T 3hem_A 140 RIVSLGAF 147 (302)
T ss_dssp EEEEESCG
T ss_pred EEEEcchH
Confidence 99987543
No 151
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=98.85 E-value=1.9e-08 Score=90.56 Aligned_cols=80 Identities=16% Similarity=0.081 Sum_probs=65.9
Q ss_pred CCCEEEEECCccchHHHHHHHc-C-CCEEEEEeCCHHHHHHHHHHHHHHh-C-CCCcEEEEEcchhhHHHHHhhhcCCCC
Q 022298 155 RPGRWLDLYSGTGSVGIEAISR-G-CSEVHFVEMDPWVVSNVLIPNLEWT-G-FLDVSSIHTVRVETFLERAEQFVGKDG 230 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSr-G-a~~V~~VD~n~~Al~~~a~~N~~~~-g-~~~~~~vi~~D~~~~l~~~~~~~~~~~ 230 (299)
.+.+|||+|||+|.++++++.+ | ..+|+++|+++.++ +.+++|++.+ + +.++++++.+|+.+.. ...+
T Consensus 99 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~-~~a~~~~~~~~g~~~~~v~~~~~d~~~~~-------~~~~ 170 (280)
T 1i9g_A 99 PGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHA-EHARRNVSGCYGQPPDNWRLVVSDLADSE-------LPDG 170 (280)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHH-HHHHHHHHHHHTSCCTTEEEECSCGGGCC-------CCTT
T ss_pred CCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHH-HHHHHHHHHhcCCCCCcEEEEECchHhcC-------CCCC
Confidence 5789999999999999988874 3 45899999999998 9999999988 5 4456899999987642 1246
Q ss_pred CeeEEEEcCCCC
Q 022298 231 PFDYMSVTPPYT 242 (299)
Q Consensus 231 ~fDlI~iDPPY~ 242 (299)
.||+|++|+|..
T Consensus 171 ~~D~v~~~~~~~ 182 (280)
T 1i9g_A 171 SVDRAVLDMLAP 182 (280)
T ss_dssp CEEEEEEESSCG
T ss_pred ceeEEEECCcCH
Confidence 799999999844
No 152
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=98.85 E-value=1.1e-08 Score=89.29 Aligned_cols=90 Identities=16% Similarity=0.060 Sum_probs=70.8
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcc
Q 022298 135 VVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVR 214 (299)
Q Consensus 135 ~Vrealfn~L~~~~~~~~~~~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D 214 (299)
.+.+.+.+.+.. ..+.+|||+|||+|.++..++..+ .+|+++|+++.++ +.+++|+..++ +++++++|
T Consensus 57 ~~~~~~~~~~~~-------~~~~~vLdiG~G~G~~~~~l~~~~-~~v~~vD~~~~~~-~~a~~~~~~~~---~v~~~~~d 124 (231)
T 1vbf_A 57 NLGIFMLDELDL-------HKGQKVLEIGTGIGYYTALIAEIV-DKVVSVEINEKMY-NYASKLLSYYN---NIKLILGD 124 (231)
T ss_dssp HHHHHHHHHTTC-------CTTCEEEEECCTTSHHHHHHHHHS-SEEEEEESCHHHH-HHHHHHHTTCS---SEEEEESC
T ss_pred HHHHHHHHhcCC-------CCCCEEEEEcCCCCHHHHHHHHHc-CEEEEEeCCHHHH-HHHHHHHhhcC---CeEEEECC
Confidence 344455555532 357899999999999999988887 5899999999998 99999987766 48899999
Q ss_pred hhhHHHHHhhhcCCCCCeeEEEEcCCCCC
Q 022298 215 VETFLERAEQFVGKDGPFDYMSVTPPYTA 243 (299)
Q Consensus 215 ~~~~l~~~~~~~~~~~~fDlI~iDPPY~~ 243 (299)
+.+.+. ..+.||+|+++.++..
T Consensus 125 ~~~~~~-------~~~~fD~v~~~~~~~~ 146 (231)
T 1vbf_A 125 GTLGYE-------EEKPYDRVVVWATAPT 146 (231)
T ss_dssp GGGCCG-------GGCCEEEEEESSBBSS
T ss_pred cccccc-------cCCCccEEEECCcHHH
Confidence 876321 1368999999988754
No 153
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=98.84 E-value=1.7e-08 Score=91.13 Aligned_cols=80 Identities=18% Similarity=0.229 Sum_probs=67.2
Q ss_pred CCCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCeeE
Q 022298 155 RPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDY 234 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fDl 234 (299)
.+.+|||+|||+|.++..++.+|+ +|+++|+++.++ +.++++++..++.++++++++|+.+.... ..++||+
T Consensus 68 ~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~-~~a~~~~~~~~~~~~v~~~~~d~~~~~~~------~~~~fD~ 139 (285)
T 4htf_A 68 QKLRVLDAGGGEGQTAIKMAERGH-QVILCDLSAQMI-DRAKQAAEAKGVSDNMQFIHCAAQDVASH------LETPVDL 139 (285)
T ss_dssp SCCEEEEETCTTCHHHHHHHHTTC-EEEEEESCHHHH-HHHHHHHHC-CCGGGEEEEESCGGGTGGG------CSSCEEE
T ss_pred CCCEEEEeCCcchHHHHHHHHCCC-EEEEEECCHHHH-HHHHHHHHhcCCCcceEEEEcCHHHhhhh------cCCCceE
Confidence 467999999999999999888876 799999999998 99999999988866799999999876421 2478999
Q ss_pred EEEcCCCC
Q 022298 235 MSVTPPYT 242 (299)
Q Consensus 235 I~iDPPY~ 242 (299)
|++.-...
T Consensus 140 v~~~~~l~ 147 (285)
T 4htf_A 140 ILFHAVLE 147 (285)
T ss_dssp EEEESCGG
T ss_pred EEECchhh
Confidence 99876543
No 154
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=98.83 E-value=1e-08 Score=90.25 Aligned_cols=79 Identities=13% Similarity=-0.125 Sum_probs=62.5
Q ss_pred CCCEEEEECCccchHHHHHHHc-C-CCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCe
Q 022298 155 RPGRWLDLYSGTGSVGIEAISR-G-CSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPF 232 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSr-G-a~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~f 232 (299)
.+.+|||+|||+|.+++.++.+ | ..+|++||+++.++ +.+.+|++.+ .+++++++|+.+.... ....+.|
T Consensus 77 ~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i-~~~~~~a~~~---~~v~~~~~d~~~~~~~----~~~~~~~ 148 (233)
T 2ipx_A 77 PGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSG-RDLINLAKKR---TNIIPVIEDARHPHKY----RMLIAMV 148 (233)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHH-HHHHHHHHHC---TTEEEECSCTTCGGGG----GGGCCCE
T ss_pred CCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHH-HHHHHHhhcc---CCeEEEEcccCChhhh----cccCCcE
Confidence 4789999999999999988876 3 45899999999987 7888888775 3488999998764211 1124689
Q ss_pred eEEEEcCCC
Q 022298 233 DYMSVTPPY 241 (299)
Q Consensus 233 DlI~iDPPY 241 (299)
|+|++|+|.
T Consensus 149 D~V~~~~~~ 157 (233)
T 2ipx_A 149 DVIFADVAQ 157 (233)
T ss_dssp EEEEECCCC
T ss_pred EEEEEcCCC
Confidence 999999993
No 155
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=98.83 E-value=1.4e-08 Score=89.66 Aligned_cols=95 Identities=17% Similarity=0.100 Sum_probs=72.4
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEE
Q 022298 133 MEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHT 212 (299)
Q Consensus 133 td~Vrealfn~L~~~~~~~~~~~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~ 212 (299)
...+...+.+.+.. ..+.+|||+|||+|.+++.++.++..+|+++|+++.++ +.+++|++.+++.+ ++++.
T Consensus 76 ~~~~~~~~~~~l~~-------~~~~~vLdiG~G~G~~~~~la~~~~~~v~~vD~~~~~~-~~a~~~~~~~~~~~-v~~~~ 146 (235)
T 1jg1_A 76 APHMVAIMLEIANL-------KPGMNILEVGTGSGWNAALISEIVKTDVYTIERIPELV-EFAKRNLERAGVKN-VHVIL 146 (235)
T ss_dssp CHHHHHHHHHHHTC-------CTTCCEEEECCTTSHHHHHHHHHHCSCEEEEESCHHHH-HHHHHHHHHTTCCS-EEEEE
T ss_pred cHHHHHHHHHhcCC-------CCCCEEEEEeCCcCHHHHHHHHHhCCEEEEEeCCHHHH-HHHHHHHHHcCCCC-cEEEE
Confidence 33455555566542 35779999999999999988876525799999999998 99999999998866 88999
Q ss_pred cchhhHHHHHhhhcCCCCCeeEEEEcCCCCC
Q 022298 213 VRVETFLERAEQFVGKDGPFDYMSVTPPYTA 243 (299)
Q Consensus 213 ~D~~~~l~~~~~~~~~~~~fDlI~iDPPY~~ 243 (299)
+|+...+. ....||+|+++.+...
T Consensus 147 ~d~~~~~~-------~~~~fD~Ii~~~~~~~ 170 (235)
T 1jg1_A 147 GDGSKGFP-------PKAPYDVIIVTAGAPK 170 (235)
T ss_dssp SCGGGCCG-------GGCCEEEEEECSBBSS
T ss_pred CCcccCCC-------CCCCccEEEECCcHHH
Confidence 99733221 1246999999987654
No 156
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=98.83 E-value=9.7e-09 Score=90.50 Aligned_cols=80 Identities=14% Similarity=-0.006 Sum_probs=63.4
Q ss_pred CCCEEEEECCccchHHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCee
Q 022298 155 RPGRWLDLYSGTGSVGIEAISR-GCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFD 233 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSr-Ga~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fD 233 (299)
.+.+|||+|||+|.+++.++.+ |..+|++||+++.++ +.+++|++.+ +++.++.+|+....... . ..+.||
T Consensus 74 ~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~-~~a~~~~~~~---~~v~~~~~d~~~~~~~~---~-~~~~~D 145 (230)
T 1fbn_A 74 RDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIM-RELLDACAER---ENIIPILGDANKPQEYA---N-IVEKVD 145 (230)
T ss_dssp TTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHH-HHHHHHTTTC---TTEEEEECCTTCGGGGT---T-TSCCEE
T ss_pred CCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHH-HHHHHHhhcC---CCeEEEECCCCCccccc---c-cCccEE
Confidence 5789999999999999988876 656899999999998 9999997655 45889999987632100 0 126799
Q ss_pred EEEEcCCCC
Q 022298 234 YMSVTPPYT 242 (299)
Q Consensus 234 lI~iDPPY~ 242 (299)
+|+.|+|..
T Consensus 146 ~v~~~~~~~ 154 (230)
T 1fbn_A 146 VIYEDVAQP 154 (230)
T ss_dssp EEEECCCST
T ss_pred EEEEecCCh
Confidence 999998755
No 157
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=98.81 E-value=3.1e-08 Score=88.45 Aligned_cols=81 Identities=15% Similarity=0.094 Sum_probs=67.1
Q ss_pred CCCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCeeE
Q 022298 155 RPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDY 234 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fDl 234 (299)
.+.+|||+|||+|.+++.++.+...+|+++|+++.++ +.++++++..++.++++++.+|+.+.. ...++||+
T Consensus 61 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~-~~a~~~~~~~~~~~~~~~~~~d~~~~~-------~~~~~fD~ 132 (273)
T 3bus_A 61 SGDRVLDVGCGIGKPAVRLATARDVRVTGISISRPQV-NQANARATAAGLANRVTFSYADAMDLP-------FEDASFDA 132 (273)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHSCCEEEEEESCHHHH-HHHHHHHHHTTCTTTEEEEECCTTSCC-------SCTTCEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHhcCCEEEEEeCCHHHH-HHHHHHHHhcCCCcceEEEECccccCC-------CCCCCccE
Confidence 5789999999999999988875345799999999998 999999999998778999999987631 12468999
Q ss_pred EEEcCCCCC
Q 022298 235 MSVTPPYTA 243 (299)
Q Consensus 235 I~iDPPY~~ 243 (299)
|++.-....
T Consensus 133 v~~~~~l~~ 141 (273)
T 3bus_A 133 VWALESLHH 141 (273)
T ss_dssp EEEESCTTT
T ss_pred EEEechhhh
Confidence 998765543
No 158
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=98.79 E-value=2.4e-08 Score=87.02 Aligned_cols=81 Identities=16% Similarity=0.139 Sum_probs=66.0
Q ss_pred CCCEEEEECCccchHHHHHHHc-CC-CEEEEEeCCHHHHHHHHHHHHHHhCC----CCcEEEEEcchhhHHHHHhhhcCC
Q 022298 155 RPGRWLDLYSGTGSVGIEAISR-GC-SEVHFVEMDPWVVSNVLIPNLEWTGF----LDVSSIHTVRVETFLERAEQFVGK 228 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSr-Ga-~~V~~VD~n~~Al~~~a~~N~~~~g~----~~~~~vi~~D~~~~l~~~~~~~~~ 228 (299)
.+.+|||+|||+|.++..++.+ |. .+|+++|+++.++ +.+++|++.++. .++++++.+|+..... .
T Consensus 77 ~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~-~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~-------~ 148 (226)
T 1i1n_A 77 EGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELV-DDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYA-------E 148 (226)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHH-HHHHHHHHHHCTHHHHTSSEEEEESCGGGCCG-------G
T ss_pred CCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHH-HHHHHHHHhhcccccCCCcEEEEECCcccCcc-------c
Confidence 5789999999999999988765 43 4899999999998 999999998764 3458899999875321 1
Q ss_pred CCCeeEEEEcCCCCC
Q 022298 229 DGPFDYMSVTPPYTA 243 (299)
Q Consensus 229 ~~~fDlI~iDPPY~~ 243 (299)
.+.||+|+++.|+..
T Consensus 149 ~~~fD~i~~~~~~~~ 163 (226)
T 1i1n_A 149 EAPYDAIHVGAAAPV 163 (226)
T ss_dssp GCCEEEEEECSBBSS
T ss_pred CCCcCEEEECCchHH
Confidence 357999999998764
No 159
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=98.78 E-value=5.5e-08 Score=87.91 Aligned_cols=96 Identities=19% Similarity=0.102 Sum_probs=73.7
Q ss_pred CCCHHHHHHHHHHHHHhcCCCCCCCCCCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCC---C
Q 022298 130 RPMMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFL---D 206 (299)
Q Consensus 130 RPttd~Vrealfn~L~~~~~~~~~~~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~---~ 206 (299)
+...+..++.+.+.+.. ..+.+|||+|||+|.+++.++.+|+ +|+++|+|+.++ +.+++|+...+.. .
T Consensus 39 ~~~~~~~~~~l~~~l~~-------~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~l-~~a~~~~~~~~~~~~~~ 109 (293)
T 3thr_A 39 RSRTAEYKAWLLGLLRQ-------HGCHRVLDVACGTGVDSIMLVEEGF-SVTSVDASDKML-KYALKERWNRRKEPAFD 109 (293)
T ss_dssp SCBCHHHHHHHHHHHHH-------TTCCEEEETTCTTSHHHHHHHHTTC-EEEEEESCHHHH-HHHHHHHHHTTTSHHHH
T ss_pred cchHHHHHHHHHHHhcc-------cCCCEEEEecCCCCHHHHHHHHCCC-eEEEEECCHHHH-HHHHHhhhhcccccccc
Confidence 45556677777777765 2578999999999999999999987 799999999998 9999987554332 2
Q ss_pred cEEEEEcchhhHHHHHhhhcCCCCCeeEEEEc
Q 022298 207 VSSIHTVRVETFLERAEQFVGKDGPFDYMSVT 238 (299)
Q Consensus 207 ~~~vi~~D~~~~l~~~~~~~~~~~~fDlI~iD 238 (299)
++.+..+|+..+.... ...++||+|++.
T Consensus 110 ~~~~~~~d~~~~~~~~----~~~~~fD~V~~~ 137 (293)
T 3thr_A 110 KWVIEEANWLTLDKDV----PAGDGFDAVICL 137 (293)
T ss_dssp TCEEEECCGGGHHHHS----CCTTCEEEEEEC
T ss_pred eeeEeecChhhCcccc----ccCCCeEEEEEc
Confidence 4678889987754221 124789999996
No 160
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=98.77 E-value=2.5e-08 Score=93.12 Aligned_cols=73 Identities=21% Similarity=0.151 Sum_probs=61.2
Q ss_pred CCCCEEEEECCccchHHHHHH-H-cCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCC
Q 022298 154 LRPGRWLDLYSGTGSVGIEAI-S-RGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGP 231 (299)
Q Consensus 154 ~~~~~VLDLfaGSGalgIEAl-S-rGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~ 231 (299)
..+.+|||+|||+|.++...+ . .|+ +|++||+|+.++ +.+++|++..|+ ++++++++|+.++. .+.
T Consensus 121 ~~g~rVLDIGcG~G~~ta~~lA~~~ga-~V~gIDis~~~l-~~Ar~~~~~~gl-~~v~~v~gDa~~l~---------d~~ 188 (298)
T 3fpf_A 121 RRGERAVFIGGGPLPLTGILLSHVYGM-RVNVVEIEPDIA-ELSRKVIEGLGV-DGVNVITGDETVID---------GLE 188 (298)
T ss_dssp CTTCEEEEECCCSSCHHHHHHHHTTCC-EEEEEESSHHHH-HHHHHHHHHHTC-CSEEEEESCGGGGG---------GCC
T ss_pred CCcCEEEEECCCccHHHHHHHHHccCC-EEEEEECCHHHH-HHHHHHHHhcCC-CCeEEEECchhhCC---------CCC
Confidence 368999999999997764433 3 365 799999999998 999999999998 77999999998752 368
Q ss_pred eeEEEEc
Q 022298 232 FDYMSVT 238 (299)
Q Consensus 232 fDlI~iD 238 (299)
||+||++
T Consensus 189 FDvV~~~ 195 (298)
T 3fpf_A 189 FDVLMVA 195 (298)
T ss_dssp CSEEEEC
T ss_pred cCEEEEC
Confidence 9999986
No 161
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=98.77 E-value=2.2e-08 Score=92.10 Aligned_cols=77 Identities=13% Similarity=-0.022 Sum_probs=65.9
Q ss_pred CCCEEEEECCccchHHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCee
Q 022298 155 RPGRWLDLYSGTGSVGIEAISR-GCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFD 233 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSr-Ga~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fD 233 (299)
.+.+|||+|||+|.+++.++.+ |+ +|+++|+++.++ +.+++|++.+++.++++++.+|+.+.. ...+.||
T Consensus 117 ~~~~vLDiGcG~G~~~~~la~~~~~-~v~gvD~s~~~~-~~a~~~~~~~~~~~~v~~~~~d~~~~~-------~~~~~fD 187 (312)
T 3vc1_A 117 PDDTLVDAGCGRGGSMVMAHRRFGS-RVEGVTLSAAQA-DFGNRRARELRIDDHVRSRVCNMLDTP-------FDKGAVT 187 (312)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHCC-EEEEEESCHHHH-HHHHHHHHHTTCTTTEEEEECCTTSCC-------CCTTCEE
T ss_pred CCCEEEEecCCCCHHHHHHHHHcCC-EEEEEeCCHHHH-HHHHHHHHHcCCCCceEEEECChhcCC-------CCCCCEe
Confidence 5789999999999999998887 65 699999999998 999999999998878999999987641 1247899
Q ss_pred EEEEcCC
Q 022298 234 YMSVTPP 240 (299)
Q Consensus 234 lI~iDPP 240 (299)
+|++.--
T Consensus 188 ~V~~~~~ 194 (312)
T 3vc1_A 188 ASWNNES 194 (312)
T ss_dssp EEEEESC
T ss_pred EEEECCc
Confidence 9998644
No 162
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=98.77 E-value=2.6e-08 Score=86.01 Aligned_cols=79 Identities=13% Similarity=0.053 Sum_probs=66.0
Q ss_pred CCCEEEEECCccchHHHHHHHcC--CCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCe
Q 022298 155 RPGRWLDLYSGTGSVGIEAISRG--CSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPF 232 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSrG--a~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~f 232 (299)
.+.+|||+|||+|.++..++.++ ..+|+++|+++.++ +.+++|+...++. +++++.+|+.++. ...++|
T Consensus 37 ~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~-~~a~~~~~~~~~~-~~~~~~~d~~~~~-------~~~~~f 107 (219)
T 3dh0_A 37 EGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMV-NYAWEKVNKLGLK-NVEVLKSEENKIP-------LPDNTV 107 (219)
T ss_dssp TTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHH-HHHHHHHHHHTCT-TEEEEECBTTBCS-------SCSSCE
T ss_pred CCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHH-HHHHHHHHHcCCC-cEEEEecccccCC-------CCCCCe
Confidence 57899999999999999988875 34899999999998 9999999999876 4899999987642 124689
Q ss_pred eEEEEcCCCC
Q 022298 233 DYMSVTPPYT 242 (299)
Q Consensus 233 DlI~iDPPY~ 242 (299)
|+|+++-...
T Consensus 108 D~v~~~~~l~ 117 (219)
T 3dh0_A 108 DFIFMAFTFH 117 (219)
T ss_dssp EEEEEESCGG
T ss_pred eEEEeehhhh
Confidence 9999976644
No 163
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=98.76 E-value=4.1e-08 Score=87.39 Aligned_cols=76 Identities=16% Similarity=0.073 Sum_probs=63.3
Q ss_pred CCCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCeeE
Q 022298 155 RPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDY 234 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fDl 234 (299)
.+.+|||+|||+|.++..++.++. +|+++|+++.++ +.++++++..+.. +++++.+|+.++. ...+.||+
T Consensus 37 ~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~l-~~a~~~~~~~~~~-~v~~~~~d~~~l~-------~~~~~fD~ 106 (260)
T 1vl5_A 37 GNEEVLDVATGGGHVANAFAPFVK-KVVAFDLTEDIL-KVARAFIEGNGHQ-QVEYVQGDAEQMP-------FTDERFHI 106 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHGGGSS-EEEEEESCHHHH-HHHHHHHHHTTCC-SEEEEECCC-CCC-------SCTTCEEE
T ss_pred CCCEEEEEeCCCCHHHHHHHHhCC-EEEEEeCCHHHH-HHHHHHHHhcCCC-ceEEEEecHHhCC-------CCCCCEEE
Confidence 578999999999999998888876 899999999998 9999999988875 4889999987631 12468999
Q ss_pred EEEcCC
Q 022298 235 MSVTPP 240 (299)
Q Consensus 235 I~iDPP 240 (299)
|++.--
T Consensus 107 V~~~~~ 112 (260)
T 1vl5_A 107 VTCRIA 112 (260)
T ss_dssp EEEESC
T ss_pred EEEhhh
Confidence 998743
No 164
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=98.76 E-value=5e-08 Score=95.40 Aligned_cols=95 Identities=14% Similarity=0.112 Sum_probs=69.7
Q ss_pred CHHHHHHHHHHHHHhcCCCCCCCCCCEEEEECCccchHHHHHHHc-CCCEEEEEeCCHHHHHHHH-------HHHHHHhC
Q 022298 132 MMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISR-GCSEVHFVEMDPWVVSNVL-------IPNLEWTG 203 (299)
Q Consensus 132 ttd~Vrealfn~L~~~~~~~~~~~~~~VLDLfaGSGalgIEAlSr-Ga~~V~~VD~n~~Al~~~a-------~~N~~~~g 203 (299)
+...+...++..+.. ..+.+|||+|||+|.+++.++.+ |+.+|++||+++.++ +.+ ++|++.+|
T Consensus 226 t~p~~v~~ml~~l~l-------~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l-~~A~~Ml~~ar~~~~~~G 297 (433)
T 1u2z_A 226 LLPNFLSDVYQQCQL-------KKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDAS-DLTILQYEELKKRCKLYG 297 (433)
T ss_dssp BCHHHHHHHHHHTTC-------CTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHH-HHHHHHHHHHHHHHHHTT
T ss_pred ccHHHHHHHHHhcCC-------CCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHH-HHHHHhHHHHHHHHHHcC
Confidence 334444555555532 35789999999999999998875 777899999999997 888 99999988
Q ss_pred CC-CcEEEEEcchh-hH--HHHHhhhcCCCCCeeEEEEcCC
Q 022298 204 FL-DVSSIHTVRVE-TF--LERAEQFVGKDGPFDYMSVTPP 240 (299)
Q Consensus 204 ~~-~~~~vi~~D~~-~~--l~~~~~~~~~~~~fDlI~iDPP 240 (299)
+. ++++++++|.. .. +... .+.||+|+++..
T Consensus 298 l~~~nV~~i~gD~~~~~~~~~~~------~~~FDvIvvn~~ 332 (433)
T 1u2z_A 298 MRLNNVEFSLKKSFVDNNRVAEL------IPQCDVILVNNF 332 (433)
T ss_dssp BCCCCEEEEESSCSTTCHHHHHH------GGGCSEEEECCT
T ss_pred CCCCceEEEEcCccccccccccc------cCCCCEEEEeCc
Confidence 53 46888887643 21 1111 257999999754
No 165
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=98.75 E-value=1.1e-08 Score=87.47 Aligned_cols=76 Identities=18% Similarity=0.151 Sum_probs=62.9
Q ss_pred CCCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCeeE
Q 022298 155 RPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDY 234 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fDl 234 (299)
.+.+|||+|||+|.+++.++.+|..+|+++|+|+.++ +.+++|... ..+++++.+|+.+.. ...+.||+
T Consensus 42 ~~~~vLdiGcG~G~~~~~l~~~~~~~v~~~D~s~~~~-~~a~~~~~~---~~~i~~~~~d~~~~~-------~~~~~fD~ 110 (215)
T 2pxx_A 42 PEDRILVLGCGNSALSYELFLGGFPNVTSVDYSSVVV-AAMQACYAH---VPQLRWETMDVRKLD-------FPSASFDV 110 (215)
T ss_dssp TTCCEEEETCTTCSHHHHHHHTTCCCEEEEESCHHHH-HHHHHHTTT---CTTCEEEECCTTSCC-------SCSSCEEE
T ss_pred CCCeEEEECCCCcHHHHHHHHcCCCcEEEEeCCHHHH-HHHHHhccc---CCCcEEEEcchhcCC-------CCCCcccE
Confidence 4789999999999999999988876899999999998 999998764 235788999987641 12468999
Q ss_pred EEEcCCC
Q 022298 235 MSVTPPY 241 (299)
Q Consensus 235 I~iDPPY 241 (299)
|++++++
T Consensus 111 v~~~~~~ 117 (215)
T 2pxx_A 111 VLEKGTL 117 (215)
T ss_dssp EEEESHH
T ss_pred EEECcch
Confidence 9998876
No 166
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=98.75 E-value=2.9e-08 Score=87.11 Aligned_cols=91 Identities=13% Similarity=0.062 Sum_probs=68.5
Q ss_pred CCCCHHHHHHHHHHHHHhcCCCCCCCCCCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcE
Q 022298 129 VRPMMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVS 208 (299)
Q Consensus 129 ~RPttd~Vrealfn~L~~~~~~~~~~~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~ 208 (299)
.+|.++.+.+.++..+. ..+.+|||+|||+|.+++.++.+|+ +|+++|+++.++ +.+++| . .++
T Consensus 30 ~~~~~~~l~~~~~~~~~--------~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~-~~a~~~-----~-~~~ 93 (226)
T 3m33_A 30 SGPDPELTFDLWLSRLL--------TPQTRVLEAGCGHGPDAARFGPQAA-RWAAYDFSPELL-KLARAN-----A-PHA 93 (226)
T ss_dssp SSSCTTHHHHHHHHHHC--------CTTCEEEEESCTTSHHHHHHGGGSS-EEEEEESCHHHH-HHHHHH-----C-TTS
T ss_pred CCCCHHHHHHHHHHhcC--------CCCCeEEEeCCCCCHHHHHHHHcCC-EEEEEECCHHHH-HHHHHh-----C-CCc
Confidence 46766666665554332 2578999999999999999888876 799999999998 899888 2 247
Q ss_pred EEEEcchhhHHHHHhhhcCC-CCCeeEEEEcCCC
Q 022298 209 SIHTVRVETFLERAEQFVGK-DGPFDYMSVTPPY 241 (299)
Q Consensus 209 ~vi~~D~~~~l~~~~~~~~~-~~~fDlI~iDPPY 241 (299)
+++++|+.+.+. .. .++||+|++++..
T Consensus 94 ~~~~~d~~~~~~------~~~~~~fD~v~~~~~~ 121 (226)
T 3m33_A 94 DVYEWNGKGELP------AGLGAPFGLIVSRRGP 121 (226)
T ss_dssp EEEECCSCSSCC------TTCCCCEEEEEEESCC
T ss_pred eEEEcchhhccC------CcCCCCEEEEEeCCCH
Confidence 899999854321 12 4689999998543
No 167
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=98.75 E-value=2.2e-08 Score=91.74 Aligned_cols=49 Identities=18% Similarity=0.232 Sum_probs=40.6
Q ss_pred CCCCEEEEECCccchHHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHHHhC
Q 022298 154 LRPGRWLDLYSGTGSVGIEAISR-GCSEVHFVEMDPWVVSNVLIPNLEWTG 203 (299)
Q Consensus 154 ~~~~~VLDLfaGSGalgIEAlSr-Ga~~V~~VD~n~~Al~~~a~~N~~~~g 203 (299)
..+.+|||+|||+|.+++.++.+ +..+|++||+|+.++ +.+++|++..+
T Consensus 45 ~~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i-~~A~~~~~~~~ 94 (292)
T 3g07_A 45 FRGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLI-HSARQNIRHYL 94 (292)
T ss_dssp TTTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHH-HHHHHTC----
T ss_pred cCCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHH-HHHHHHHHhhh
Confidence 35789999999999999998876 556899999999998 99999987665
No 168
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=98.74 E-value=5.5e-08 Score=88.70 Aligned_cols=85 Identities=8% Similarity=0.023 Sum_probs=64.4
Q ss_pred CCCEEEEECCccchHHHHHHH--cCCCEEEEEeCCHHHHHHHHHHHHHHh-CCCCcEEEEEcchhhHHHHHhhhcCCCCC
Q 022298 155 RPGRWLDLYSGTGSVGIEAIS--RGCSEVHFVEMDPWVVSNVLIPNLEWT-GFLDVSSIHTVRVETFLERAEQFVGKDGP 231 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlS--rGa~~V~~VD~n~~Al~~~a~~N~~~~-g~~~~~~vi~~D~~~~l~~~~~~~~~~~~ 231 (299)
.+.+|||+|||+|.+++.++. .+..+|+++|+++.++ +.+++|++.. +...+++++++|+.++..... .....++
T Consensus 36 ~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~-~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~-~~~~~~~ 113 (299)
T 3g5t_A 36 ERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMI-KTAEVIKEGSPDTYKNVSFKISSSDDFKFLGA-DSVDKQK 113 (299)
T ss_dssp CCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHH-HHHHHHHHHCC-CCTTEEEEECCTTCCGGGCT-TTTTSSC
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHH-HHHHHHHHhccCCCCceEEEEcCHHhCCcccc-ccccCCC
Confidence 578999999999999998875 3566899999999998 9999999887 444569999999876431000 0000268
Q ss_pred eeEEEEcCCC
Q 022298 232 FDYMSVTPPY 241 (299)
Q Consensus 232 fDlI~iDPPY 241 (299)
||+|++.-..
T Consensus 114 fD~V~~~~~l 123 (299)
T 3g5t_A 114 IDMITAVECA 123 (299)
T ss_dssp EEEEEEESCG
T ss_pred eeEEeHhhHH
Confidence 9999997654
No 169
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=98.74 E-value=2.9e-08 Score=89.37 Aligned_cols=80 Identities=16% Similarity=0.007 Sum_probs=66.7
Q ss_pred CCCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCeeE
Q 022298 155 RPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDY 234 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fDl 234 (299)
.+.+|||+|||+|.++..++.+|..+|+++|+++.++ +.+++|+...+...+++++++|+.+.. + ...+.||+
T Consensus 64 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~-~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~-~~~~~fD~ 136 (298)
T 1ri5_A 64 RGDSVLDLGCGKGGDLLKYERAGIGEYYGVDIAEVSI-NDARVRARNMKRRFKVFFRAQDSYGRH-----M-DLGKEFDV 136 (298)
T ss_dssp TTCEEEEETCTTTTTHHHHHHHTCSEEEEEESCHHHH-HHHHHHHHTSCCSSEEEEEESCTTTSC-----C-CCSSCEEE
T ss_pred CCCeEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHH-HHHHHHHHhcCCCccEEEEECCccccc-----c-CCCCCcCE
Confidence 5789999999999999988888877899999999998 999999998887667899999987641 0 12468999
Q ss_pred EEEcCCC
Q 022298 235 MSVTPPY 241 (299)
Q Consensus 235 I~iDPPY 241 (299)
|+++-..
T Consensus 137 v~~~~~l 143 (298)
T 1ri5_A 137 ISSQFSF 143 (298)
T ss_dssp EEEESCG
T ss_pred EEECchh
Confidence 9988543
No 170
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.74 E-value=1.9e-08 Score=92.88 Aligned_cols=94 Identities=20% Similarity=0.205 Sum_probs=68.5
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCEEEEECCccchHHHHHHHcCCCE---EEEEeCCHHHHHHHHHHHHHHhCCCCcEEEE
Q 022298 135 VVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGCSE---VHFVEMDPWVVSNVLIPNLEWTGFLDVSSIH 211 (299)
Q Consensus 135 ~Vrealfn~L~~~~~~~~~~~~~~VLDLfaGSGalgIEAlSrGa~~---V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi 211 (299)
.+.+.+.+.+.. ..+.+|||+|||+|.++..++.++..+ |++||+|+.++ +.+++|. .++++++
T Consensus 29 ~i~~~iv~~~~~-------~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l-~~a~~~~-----~~~v~~i 95 (279)
T 3uzu_A 29 GVIDAIVAAIRP-------ERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLI-GRLEQRF-----GELLELH 95 (279)
T ss_dssp HHHHHHHHHHCC-------CTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHH-HHHHHHH-----GGGEEEE
T ss_pred HHHHHHHHhcCC-------CCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHH-HHHHHhc-----CCCcEEE
Confidence 456666666643 357899999999999999988876532 99999999998 9999993 2458999
Q ss_pred EcchhhHHHHHhhhcCCC-CCeeEEEEcCCCCC
Q 022298 212 TVRVETFLERAEQFVGKD-GPFDYMSVTPPYTA 243 (299)
Q Consensus 212 ~~D~~~~l~~~~~~~~~~-~~fDlI~iDPPY~~ 243 (299)
++|+.++.- ..+.... ...+.|+.|+||..
T Consensus 96 ~~D~~~~~~--~~~~~~~~~~~~~vv~NlPY~i 126 (279)
T 3uzu_A 96 AGDALTFDF--GSIARPGDEPSLRIIGNLPYNI 126 (279)
T ss_dssp ESCGGGCCG--GGGSCSSSSCCEEEEEECCHHH
T ss_pred ECChhcCCh--hHhcccccCCceEEEEccCccc
Confidence 999987521 0010000 13468999999984
No 171
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=98.73 E-value=8.6e-08 Score=86.90 Aligned_cols=77 Identities=16% Similarity=0.209 Sum_probs=65.4
Q ss_pred CCCEEEEECCccchHHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCee
Q 022298 155 RPGRWLDLYSGTGSVGIEAISR-GCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFD 233 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSr-Ga~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fD 233 (299)
.+.+|||+|||+|.++..++.+ |+ +|+++|+++.++ +.++++++..++.++++++.+|+.+.. ...+.||
T Consensus 82 ~~~~vLDiGcG~G~~~~~l~~~~~~-~v~gvD~s~~~~-~~a~~~~~~~~~~~~~~~~~~d~~~~~-------~~~~~fD 152 (297)
T 2o57_A 82 RQAKGLDLGAGYGGAARFLVRKFGV-SIDCLNIAPVQN-KRNEEYNNQAGLADNITVKYGSFLEIP-------CEDNSYD 152 (297)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHCC-EEEEEESCHHHH-HHHHHHHHHHTCTTTEEEEECCTTSCS-------SCTTCEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHHhCC-EEEEEeCCHHHH-HHHHHHHHhcCCCcceEEEEcCcccCC-------CCCCCEe
Confidence 5789999999999999998876 76 799999999998 999999999998777999999987631 1246899
Q ss_pred EEEEcCC
Q 022298 234 YMSVTPP 240 (299)
Q Consensus 234 lI~iDPP 240 (299)
+|++.-.
T Consensus 153 ~v~~~~~ 159 (297)
T 2o57_A 153 FIWSQDA 159 (297)
T ss_dssp EEEEESC
T ss_pred EEEecch
Confidence 9998644
No 172
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=98.73 E-value=4.5e-08 Score=89.92 Aligned_cols=75 Identities=16% Similarity=0.072 Sum_probs=65.0
Q ss_pred CCCEEEEECCccchHHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCee
Q 022298 155 RPGRWLDLYSGTGSVGIEAISR-GCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFD 233 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSr-Ga~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fD 233 (299)
++.+|||+|||+|.+++.++.+ |+ +|+++|+++.++ +.++++++..++.++++++.+|+.++ .+.||
T Consensus 90 ~~~~vLDiGcG~G~~~~~la~~~~~-~v~gvD~s~~~~-~~a~~~~~~~~~~~~v~~~~~d~~~~----------~~~fD 157 (318)
T 2fk8_A 90 PGMTLLDIGCGWGTTMRRAVERFDV-NVIGLTLSKNQH-ARCEQVLASIDTNRSRQVLLQGWEDF----------AEPVD 157 (318)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHCC-EEEEEESCHHHH-HHHHHHHHTSCCSSCEEEEESCGGGC----------CCCCS
T ss_pred CcCEEEEEcccchHHHHHHHHHCCC-EEEEEECCHHHH-HHHHHHHHhcCCCCceEEEECChHHC----------CCCcC
Confidence 5789999999999999998877 77 799999999998 99999999888877799999998653 26799
Q ss_pred EEEEcCCC
Q 022298 234 YMSVTPPY 241 (299)
Q Consensus 234 lI~iDPPY 241 (299)
+|++.-..
T Consensus 158 ~v~~~~~l 165 (318)
T 2fk8_A 158 RIVSIEAF 165 (318)
T ss_dssp EEEEESCG
T ss_pred EEEEeChH
Confidence 99987543
No 173
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=98.72 E-value=4.3e-08 Score=86.75 Aligned_cols=77 Identities=14% Similarity=0.120 Sum_probs=63.3
Q ss_pred CCCCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCee
Q 022298 154 LRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFD 233 (299)
Q Consensus 154 ~~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fD 233 (299)
..+.+|||+|||+|.++..++.+|..+|+++|+++.++ +.++++.. ..+++++++|+.++. ...++||
T Consensus 43 ~~~~~vLD~GcG~G~~~~~l~~~~~~~v~~vD~s~~~~-~~a~~~~~----~~~~~~~~~d~~~~~-------~~~~~fD 110 (253)
T 3g5l_A 43 FNQKTVLDLGCGFGWHCIYAAEHGAKKVLGIDLSERML-TEAKRKTT----SPVVCYEQKAIEDIA-------IEPDAYN 110 (253)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHH-HHHHHHCC----CTTEEEEECCGGGCC-------CCTTCEE
T ss_pred cCCCEEEEECCCCCHHHHHHHHcCCCEEEEEECCHHHH-HHHHHhhc----cCCeEEEEcchhhCC-------CCCCCeE
Confidence 36789999999999999999999887899999999998 88888765 345889999987642 1247899
Q ss_pred EEEEcCCCC
Q 022298 234 YMSVTPPYT 242 (299)
Q Consensus 234 lI~iDPPY~ 242 (299)
+|++.-...
T Consensus 111 ~v~~~~~l~ 119 (253)
T 3g5l_A 111 VVLSSLALH 119 (253)
T ss_dssp EEEEESCGG
T ss_pred EEEEchhhh
Confidence 999876543
No 174
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=98.72 E-value=6.1e-08 Score=87.46 Aligned_cols=73 Identities=18% Similarity=0.125 Sum_probs=62.9
Q ss_pred CCCEEEEECCccchHHHHHH-HcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCee
Q 022298 155 RPGRWLDLYSGTGSVGIEAI-SRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFD 233 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAl-SrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fD 233 (299)
++.+|||+|||+|.+++.++ ..|+ +|+++|+++.++ +.++++++..+..++++++.+|+.++ .++||
T Consensus 64 ~~~~vLDiGcG~G~~~~~l~~~~~~-~v~gvd~s~~~~-~~a~~~~~~~~~~~~~~~~~~d~~~~----------~~~fD 131 (287)
T 1kpg_A 64 PGMTLLDVGCGWGATMMRAVEKYDV-NVVGLTLSKNQA-NHVQQLVANSENLRSKRVLLAGWEQF----------DEPVD 131 (287)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHCC-EEEEEESCHHHH-HHHHHHHHTCCCCSCEEEEESCGGGC----------CCCCS
T ss_pred CcCEEEEECCcccHHHHHHHHHcCC-EEEEEECCHHHH-HHHHHHHHhcCCCCCeEEEECChhhC----------CCCee
Confidence 57899999999999999888 4576 899999999998 99999999888877799999998653 26899
Q ss_pred EEEEcC
Q 022298 234 YMSVTP 239 (299)
Q Consensus 234 lI~iDP 239 (299)
+|++.-
T Consensus 132 ~v~~~~ 137 (287)
T 1kpg_A 132 RIVSIG 137 (287)
T ss_dssp EEEEES
T ss_pred EEEEeC
Confidence 999863
No 175
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=98.72 E-value=1.9e-08 Score=88.69 Aligned_cols=77 Identities=16% Similarity=0.114 Sum_probs=62.9
Q ss_pred CCCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCeeE
Q 022298 155 RPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDY 234 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fDl 234 (299)
.+.+|||+|||+|.+++.++.++..+|+++|+++.++ +.+++|+...+. .+++++.+|+.++. ...++||+
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~-~~a~~~~~~~~~-~~~~~~~~d~~~~~-------~~~~~fD~ 149 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPLFREVDMVDITEDFL-VQAKTYLGEEGK-RVRNYFCCGLQDFT-------PEPDSYDV 149 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTTCSEEEEEESCHHHH-HHHHHHTGGGGG-GEEEEEECCGGGCC-------CCSSCEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHhcCCEEEEEeCCHHHH-HHHHHHhhhcCC-ceEEEEEcChhhcC-------CCCCCEEE
Confidence 4789999999999999988888776899999999998 999999877652 35788999987642 12358999
Q ss_pred EEEcCC
Q 022298 235 MSVTPP 240 (299)
Q Consensus 235 I~iDPP 240 (299)
|+++-.
T Consensus 150 v~~~~~ 155 (241)
T 2ex4_A 150 IWIQWV 155 (241)
T ss_dssp EEEESC
T ss_pred EEEcch
Confidence 998843
No 176
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=98.72 E-value=5.2e-08 Score=86.01 Aligned_cols=77 Identities=18% Similarity=0.105 Sum_probs=64.7
Q ss_pred CCCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCeeE
Q 022298 155 RPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDY 234 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fDl 234 (299)
.+.+|||+|||+|.++..++.++. +|+++|+++.++ +.+++|++..+.. +++++++|+.++. ...+.||+
T Consensus 21 ~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~-~~a~~~~~~~~~~-~v~~~~~d~~~~~-------~~~~~fD~ 90 (239)
T 1xxl_A 21 AEHRVLDIGAGAGHTALAFSPYVQ-ECIGVDATKEMV-EVASSFAQEKGVE-NVRFQQGTAESLP-------FPDDSFDI 90 (239)
T ss_dssp TTCEEEEESCTTSHHHHHHGGGSS-EEEEEESCHHHH-HHHHHHHHHHTCC-SEEEEECBTTBCC-------SCTTCEEE
T ss_pred CCCEEEEEccCcCHHHHHHHHhCC-EEEEEECCHHHH-HHHHHHHHHcCCC-CeEEEecccccCC-------CCCCcEEE
Confidence 578999999999999998888875 799999999998 9999999988875 4889999987531 12468999
Q ss_pred EEEcCCC
Q 022298 235 MSVTPPY 241 (299)
Q Consensus 235 I~iDPPY 241 (299)
|++.-..
T Consensus 91 v~~~~~l 97 (239)
T 1xxl_A 91 ITCRYAA 97 (239)
T ss_dssp EEEESCG
T ss_pred EEECCch
Confidence 9987543
No 177
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.71 E-value=1.7e-08 Score=105.10 Aligned_cols=108 Identities=14% Similarity=0.107 Sum_probs=71.8
Q ss_pred CCCCCHHHHHHHHHHHHHhcCCCCCCCCCCEEEEECCccchHHHHHHHcC----CCEEEEEeCCHHHHHHHH--HHHHHH
Q 022298 128 DVRPMMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRG----CSEVHFVEMDPWVVSNVL--IPNLEW 201 (299)
Q Consensus 128 ~~RPttd~Vrealfn~L~~~~~~~~~~~~~~VLDLfaGSGalgIEAlSrG----a~~V~~VD~n~~Al~~~a--~~N~~~ 201 (299)
+.-+|...+.+.+.+.+....+ .....+.+|||+|||||++.++++.+. ..+++++|+|+.++ +++ +.|+..
T Consensus 295 GqFYTP~eLA~lMVeLA~ill~-~~l~~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al-~LAK~RlNL~l 372 (878)
T 3s1s_A 295 GVVPTDIELGKVLSIISQHILG-RPLTEDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFL-ELLSIRLGLLF 372 (878)
T ss_dssp BSSSCCHHHHHHHHHHHHHHHC-SCCCTTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGH-HHHHHHHHTTS
T ss_pred ceEcCCHHHHHHHHHHHhhhcc-ccCCCCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHH-HHHHHHHHHHH
Confidence 4567777777777666211000 001247899999999999999988753 23699999999998 899 778766
Q ss_pred hCCCC---cEEEEEcchhhHHHHHhhhcCCCCCeeEEEEcCCCCC
Q 022298 202 TGFLD---VSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTA 243 (299)
Q Consensus 202 ~g~~~---~~~vi~~D~~~~l~~~~~~~~~~~~fDlI~iDPPY~~ 243 (299)
+++.. ...+...|...... ....+||+|++||||..
T Consensus 373 N~LlhGi~~~~I~~dD~L~~~~------~~~~kFDVVIgNPPYg~ 411 (878)
T 3s1s_A 373 PQLVSSNNAPTITGEDVCSLNP------EDFANVSVVVMNPPYVS 411 (878)
T ss_dssp TTTCBTTBCCEEECCCGGGCCG------GGGTTEEEEEECCBCCS
T ss_pred hhhhcCCCcceEEecchhcccc------cccCCCCEEEECCCccc
Confidence 43321 12455556554210 01368999999999964
No 178
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=98.71 E-value=2.3e-08 Score=86.32 Aligned_cols=74 Identities=11% Similarity=0.094 Sum_probs=62.1
Q ss_pred CCCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCeeE
Q 022298 155 RPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDY 234 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fDl 234 (299)
.+.+|||+|||+|.++..++.+|. +|+++|+++.++ +.+++|+...+ +++++++|+.++. ..++||+
T Consensus 51 ~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~-~~a~~~~~~~~---~~~~~~~d~~~~~--------~~~~fD~ 117 (216)
T 3ofk_A 51 AVSNGLEIGCAAGAFTEKLAPHCK-RLTVIDVMPRAI-GRACQRTKRWS---HISWAATDILQFS--------TAELFDL 117 (216)
T ss_dssp SEEEEEEECCTTSHHHHHHGGGEE-EEEEEESCHHHH-HHHHHHTTTCS---SEEEEECCTTTCC--------CSCCEEE
T ss_pred CCCcEEEEcCCCCHHHHHHHHcCC-EEEEEECCHHHH-HHHHHhcccCC---CeEEEEcchhhCC--------CCCCccE
Confidence 567999999999999998888875 799999999998 99999876543 5899999988753 2478999
Q ss_pred EEEcCCC
Q 022298 235 MSVTPPY 241 (299)
Q Consensus 235 I~iDPPY 241 (299)
|++....
T Consensus 118 v~~~~~l 124 (216)
T 3ofk_A 118 IVVAEVL 124 (216)
T ss_dssp EEEESCG
T ss_pred EEEccHH
Confidence 9997543
No 179
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.71 E-value=5.7e-08 Score=85.74 Aligned_cols=72 Identities=22% Similarity=0.198 Sum_probs=61.4
Q ss_pred CCCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCeeE
Q 022298 155 RPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDY 234 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fDl 234 (299)
++.+|||+|||+|.+++.++.+|+ +|+++|+++.++ +.+++|+...+. +++++++|+.++. ..++||+
T Consensus 41 ~~~~vLDlGcG~G~~~~~l~~~~~-~v~gvD~s~~~l-~~a~~~~~~~~~--~v~~~~~d~~~~~--------~~~~fD~ 108 (252)
T 1wzn_A 41 EVRRVLDLACGTGIPTLELAERGY-EVVGLDLHEEML-RVARRKAKERNL--KIEFLQGDVLEIA--------FKNEFDA 108 (252)
T ss_dssp CCCEEEEETCTTCHHHHHHHHTTC-EEEEEESCHHHH-HHHHHHHHHTTC--CCEEEESCGGGCC--------CCSCEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHCCC-eEEEEECCHHHH-HHHHHHHHhcCC--ceEEEECChhhcc--------cCCCccE
Confidence 467999999999999999988886 799999999998 999999988775 3789999987642 1367999
Q ss_pred EEEc
Q 022298 235 MSVT 238 (299)
Q Consensus 235 I~iD 238 (299)
|++.
T Consensus 109 v~~~ 112 (252)
T 1wzn_A 109 VTMF 112 (252)
T ss_dssp EEEC
T ss_pred EEEc
Confidence 9974
No 180
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=98.71 E-value=3.4e-08 Score=92.97 Aligned_cols=78 Identities=13% Similarity=-0.042 Sum_probs=63.4
Q ss_pred CEEEEECCccchHHHHHHH-cCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCeeEE
Q 022298 157 GRWLDLYSGTGSVGIEAIS-RGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDYM 235 (299)
Q Consensus 157 ~~VLDLfaGSGalgIEAlS-rGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fDlI 235 (299)
.+|||+|||+|.++.+++. ....+|++||+|+.++ +.+++|+.... ..+++++.+|+.+++... ..++||+|
T Consensus 91 ~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi-~~Ar~~~~~~~-~~rv~v~~~Da~~~l~~~-----~~~~fDvI 163 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVYPQSRNTVVELDAELA-RLSREWFDIPR-APRVKIRVDDARMVAESF-----TPASRDVI 163 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHH-HHHHHHSCCCC-TTTEEEEESCHHHHHHTC-----CTTCEEEE
T ss_pred CEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHH-HHHHHhccccC-CCceEEEECcHHHHHhhc-----cCCCCCEE
Confidence 4999999999999999888 3334899999999998 99999875432 356999999999987532 24689999
Q ss_pred EEcCCC
Q 022298 236 SVTPPY 241 (299)
Q Consensus 236 ~iDPPY 241 (299)
++|.+.
T Consensus 164 i~D~~~ 169 (317)
T 3gjy_A 164 IRDVFA 169 (317)
T ss_dssp EECCST
T ss_pred EECCCC
Confidence 999643
No 181
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=98.71 E-value=4.7e-08 Score=85.36 Aligned_cols=78 Identities=12% Similarity=0.083 Sum_probs=63.3
Q ss_pred CCCCEEEEECCccchHHHHHHHcC-CCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCe
Q 022298 154 LRPGRWLDLYSGTGSVGIEAISRG-CSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPF 232 (299)
Q Consensus 154 ~~~~~VLDLfaGSGalgIEAlSrG-a~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~f 232 (299)
.++.+|||+|||+|.++..++.+. ..+|+++|+++.++ +.+++++...+ +++++++|+.+.. ..+.|
T Consensus 43 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~-~~a~~~~~~~~---~~~~~~~d~~~~~--------~~~~f 110 (234)
T 3dtn_A 43 TENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKML-EIAKNRFRGNL---KVKYIEADYSKYD--------FEEKY 110 (234)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHH-HHHHHHTCSCT---TEEEEESCTTTCC--------CCSCE
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHH-HHHHHhhccCC---CEEEEeCchhccC--------CCCCc
Confidence 357899999999999999988873 44799999999998 99999876554 5889999987642 12689
Q ss_pred eEEEEcCCCCC
Q 022298 233 DYMSVTPPYTA 243 (299)
Q Consensus 233 DlI~iDPPY~~ 243 (299)
|+|++......
T Consensus 111 D~v~~~~~l~~ 121 (234)
T 3dtn_A 111 DMVVSALSIHH 121 (234)
T ss_dssp EEEEEESCGGG
T ss_pred eEEEEeCcccc
Confidence 99999876543
No 182
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.70 E-value=2.5e-08 Score=90.60 Aligned_cols=91 Identities=13% Similarity=0.049 Sum_probs=65.9
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCEEEEECCccchHHHHHHHcCCCE--EEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEc
Q 022298 136 VKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGCSE--VHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTV 213 (299)
Q Consensus 136 Vrealfn~L~~~~~~~~~~~~~~VLDLfaGSGalgIEAlSrGa~~--V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~ 213 (299)
+.+.+.+.+.. ..+.+|||+|||+|.++. + .++ .+ |++||+|+.++ +.+++|+... ++++++++
T Consensus 9 i~~~iv~~~~~-------~~~~~VLEIG~G~G~lt~-l-~~~-~~~~v~avEid~~~~-~~a~~~~~~~---~~v~~i~~ 74 (252)
T 1qyr_A 9 VIDSIVSAINP-------QKGQAMVEIGPGLAALTE-P-VGE-RLDQLTVIELDRDLA-ARLQTHPFLG---PKLTIYQQ 74 (252)
T ss_dssp HHHHHHHHHCC-------CTTCCEEEECCTTTTTHH-H-HHT-TCSCEEEECCCHHHH-HHHHTCTTTG---GGEEEECS
T ss_pred HHHHHHHhcCC-------CCcCEEEEECCCCcHHHH-h-hhC-CCCeEEEEECCHHHH-HHHHHHhccC---CceEEEEC
Confidence 44555555532 256799999999999999 4 555 46 99999999998 9999887543 35899999
Q ss_pred chhhHH-HHHhhhcCCCCCeeEEEEcCCCCC
Q 022298 214 RVETFL-ERAEQFVGKDGPFDYMSVTPPYTA 243 (299)
Q Consensus 214 D~~~~l-~~~~~~~~~~~~fDlI~iDPPY~~ 243 (299)
|+.++- ... . ......|.|+.|+||..
T Consensus 75 D~~~~~~~~~--~-~~~~~~~~vvsNlPY~i 102 (252)
T 1qyr_A 75 DAMTFNFGEL--A-EKMGQPLRVFGNLPYNI 102 (252)
T ss_dssp CGGGCCHHHH--H-HHHTSCEEEEEECCTTT
T ss_pred chhhCCHHHh--h-cccCCceEEEECCCCCc
Confidence 998742 211 0 00024589999999985
No 183
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=98.70 E-value=4.6e-08 Score=84.67 Aligned_cols=79 Identities=16% Similarity=0.277 Sum_probs=65.0
Q ss_pred CCCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCC----CcEEEEEcchhhHHHHHhhhcCCCC
Q 022298 155 RPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFL----DVSSIHTVRVETFLERAEQFVGKDG 230 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~----~~~~vi~~D~~~~l~~~~~~~~~~~ 230 (299)
.+.+|||+|||+|.+++.++.+|+ +|+++|+++.++ +.+++|+...++. ++++++.+|+..+. ...+
T Consensus 30 ~~~~vLdiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~-~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~-------~~~~ 100 (235)
T 3sm3_A 30 EDDEILDIGCGSGKISLELASKGY-SVTGIDINSEAI-RLAETAARSPGLNQKTGGKAEFKVENASSLS-------FHDS 100 (235)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHH-HHHHHHTTCCSCCSSSSCEEEEEECCTTSCC-------SCTT
T ss_pred CCCeEEEECCCCCHHHHHHHhCCC-eEEEEECCHHHH-HHHHHHHHhcCCccccCcceEEEEecccccC-------CCCC
Confidence 478999999999999999998877 799999999998 9999998877762 35788999987542 1247
Q ss_pred CeeEEEEcCCCC
Q 022298 231 PFDYMSVTPPYT 242 (299)
Q Consensus 231 ~fDlI~iDPPY~ 242 (299)
.||+|++...+.
T Consensus 101 ~~D~v~~~~~l~ 112 (235)
T 3sm3_A 101 SFDFAVMQAFLT 112 (235)
T ss_dssp CEEEEEEESCGG
T ss_pred ceeEEEEcchhh
Confidence 899999976544
No 184
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.70 E-value=8.8e-10 Score=98.67 Aligned_cols=77 Identities=14% Similarity=0.216 Sum_probs=62.7
Q ss_pred CCCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCeeE
Q 022298 155 RPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDY 234 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fDl 234 (299)
.+.+|||+|||+|.++..++.+| .+|+++|+|+.++ +.+++|++ + .++++++++|+.++. + ...++| .
T Consensus 29 ~~~~VLDiG~G~G~~~~~l~~~~-~~v~~id~~~~~~-~~a~~~~~--~-~~~v~~~~~D~~~~~-----~-~~~~~f-~ 96 (245)
T 1yub_A 29 ETDTVYEIGTGKGHLTTKLAKIS-KQVTSIELDSHLF-NLSSEKLK--L-NTRVTLIHQDILQFQ-----F-PNKQRY-K 96 (245)
T ss_dssp SSEEEEECSCCCSSCSHHHHHHS-SEEEESSSSCSSS-SSSSCTTT--T-CSEEEECCSCCTTTT-----C-CCSSEE-E
T ss_pred CCCEEEEEeCCCCHHHHHHHHhC-CeEEEEECCHHHH-HHHHHHhc--c-CCceEEEECChhhcC-----c-ccCCCc-E
Confidence 57799999999999999998887 5799999999998 89988876 2 346889999987652 0 112568 8
Q ss_pred EEEcCCCCC
Q 022298 235 MSVTPPYTA 243 (299)
Q Consensus 235 I~iDPPY~~ 243 (299)
|++||||..
T Consensus 97 vv~n~Py~~ 105 (245)
T 1yub_A 97 IVGNIPYHL 105 (245)
T ss_dssp EEEECCSSS
T ss_pred EEEeCCccc
Confidence 999999986
No 185
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=98.69 E-value=1.7e-08 Score=92.69 Aligned_cols=80 Identities=8% Similarity=-0.088 Sum_probs=67.0
Q ss_pred CCCEEEEECCccchHHHHHH--HcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCe
Q 022298 155 RPGRWLDLYSGTGSVGIEAI--SRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPF 232 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAl--SrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~f 232 (299)
.+.+|||+|||+|.+++.++ .....+|+++|+++.++ +.+++|+...+..++++++++|+.+.. . .+.|
T Consensus 118 ~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~-~~a~~~~~~~~~~~~v~~~~~d~~~~~-------~-~~~f 188 (305)
T 3ocj_A 118 PGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEAL-DGATRLAAGHALAGQITLHRQDAWKLD-------T-REGY 188 (305)
T ss_dssp TTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHH-HHHHHHHTTSTTGGGEEEEECCGGGCC-------C-CSCE
T ss_pred CCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHH-HHHHHHHHhcCCCCceEEEECchhcCC-------c-cCCe
Confidence 57899999999999998763 33345899999999998 999999999888878999999988742 1 2789
Q ss_pred eEEEEcCCCCC
Q 022298 233 DYMSVTPPYTA 243 (299)
Q Consensus 233 DlI~iDPPY~~ 243 (299)
|+|+++.++..
T Consensus 189 D~v~~~~~~~~ 199 (305)
T 3ocj_A 189 DLLTSNGLNIY 199 (305)
T ss_dssp EEEECCSSGGG
T ss_pred EEEEECChhhh
Confidence 99999887653
No 186
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=98.68 E-value=4.2e-08 Score=86.42 Aligned_cols=89 Identities=17% Similarity=0.103 Sum_probs=67.4
Q ss_pred CCCCHHHHHHHHHHHHHhcCCCCCCCCCCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcE
Q 022298 129 VRPMMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVS 208 (299)
Q Consensus 129 ~RPttd~Vrealfn~L~~~~~~~~~~~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~ 208 (299)
.|+..+.+.+.+...+... ..+.+|||+|||+|.++..++.+|+ +|+++|+|+.++ +.++++ +
T Consensus 21 ~~~~~~~~~~~~~~~l~~~------~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~-~~a~~~---------~ 83 (240)
T 3dli_A 21 FRGSRELVKARLRRYIPYF------KGCRRVLDIGCGRGEFLELCKEEGI-ESIGVDINEDMI-KFCEGK---------F 83 (240)
T ss_dssp HTCCHHHHHHHHGGGGGGT------TTCSCEEEETCTTTHHHHHHHHHTC-CEEEECSCHHHH-HHHHTT---------S
T ss_pred hCCCHHHHHHHHHHHHhhh------cCCCeEEEEeCCCCHHHHHHHhCCC-cEEEEECCHHHH-HHHHhh---------c
Confidence 4666666666665555432 2468999999999999998888887 499999999998 888776 4
Q ss_pred EEEEcchhhHHHHHhhhcCCCCCeeEEEEcC
Q 022298 209 SIHTVRVETFLERAEQFVGKDGPFDYMSVTP 239 (299)
Q Consensus 209 ~vi~~D~~~~l~~~~~~~~~~~~fDlI~iDP 239 (299)
+++.+|+.+++... ..++||+|++.-
T Consensus 84 ~~~~~d~~~~~~~~-----~~~~fD~i~~~~ 109 (240)
T 3dli_A 84 NVVKSDAIEYLKSL-----PDKYLDGVMISH 109 (240)
T ss_dssp EEECSCHHHHHHTS-----CTTCBSEEEEES
T ss_pred ceeeccHHHHhhhc-----CCCCeeEEEECC
Confidence 57888988765321 247899999853
No 187
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=98.68 E-value=5.7e-08 Score=97.52 Aligned_cols=75 Identities=21% Similarity=0.248 Sum_probs=63.1
Q ss_pred CCCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCeeE
Q 022298 155 RPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDY 234 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fDl 234 (299)
.+.+|||+|||.|.++..++.+|+ .|++||.++.++ +.++..+...+..+ +++.+++++++.... ..++||+
T Consensus 66 ~~~~vLDvGCG~G~~~~~la~~ga-~V~giD~~~~~i-~~a~~~a~~~~~~~-~~~~~~~~~~~~~~~-----~~~~fD~ 137 (569)
T 4azs_A 66 RPLNVLDLGCAQGFFSLSLASKGA-TIVGIDFQQENI-NVCRALAEENPDFA-AEFRVGRIEEVIAAL-----EEGEFDL 137 (569)
T ss_dssp SCCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHH-HHHHHHHHTSTTSE-EEEEECCHHHHHHHC-----CTTSCSE
T ss_pred CCCeEEEECCCCcHHHHHHHhCCC-EEEEECCCHHHH-HHHHHHHHhcCCCc-eEEEECCHHHHhhhc-----cCCCccE
Confidence 467999999999999998888998 599999999998 99999988776433 889999999876432 2468999
Q ss_pred EEE
Q 022298 235 MSV 237 (299)
Q Consensus 235 I~i 237 (299)
|++
T Consensus 138 v~~ 140 (569)
T 4azs_A 138 AIG 140 (569)
T ss_dssp EEE
T ss_pred EEE
Confidence 985
No 188
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=98.68 E-value=2.9e-08 Score=86.13 Aligned_cols=77 Identities=13% Similarity=-0.079 Sum_probs=59.2
Q ss_pred CCCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHhC-----------CCCcEEEEEcchhhHHHHHh
Q 022298 155 RPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTG-----------FLDVSSIHTVRVETFLERAE 223 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g-----------~~~~~~vi~~D~~~~l~~~~ 223 (299)
.+.+|||+|||+|..+..++.+|. +|++||+|+.++ +.++++.+... ...+++++++|+.++....
T Consensus 22 ~~~~vLD~GCG~G~~~~~la~~g~-~V~gvD~S~~~l-~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~~- 98 (203)
T 1pjz_A 22 PGARVLVPLCGKSQDMSWLSGQGY-HVVGAELSEAAV-ERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTARD- 98 (203)
T ss_dssp TTCEEEETTTCCSHHHHHHHHHCC-EEEEEEECHHHH-HHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHHH-
T ss_pred CCCEEEEeCCCCcHhHHHHHHCCC-eEEEEeCCHHHH-HHHHHHccCCcccccccccccccCCccEEEECccccCCccc-
Confidence 578999999999999999888887 799999999998 89988754210 0235789999987753210
Q ss_pred hhcCCCCCeeEEEEcC
Q 022298 224 QFVGKDGPFDYMSVTP 239 (299)
Q Consensus 224 ~~~~~~~~fDlI~iDP 239 (299)
.++||+|++.-
T Consensus 99 -----~~~fD~v~~~~ 109 (203)
T 1pjz_A 99 -----IGHCAAFYDRA 109 (203)
T ss_dssp -----HHSEEEEEEES
T ss_pred -----CCCEEEEEECc
Confidence 15799999643
No 189
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=98.67 E-value=3.9e-08 Score=86.85 Aligned_cols=95 Identities=13% Similarity=0.065 Sum_probs=70.5
Q ss_pred CCCCHHHHHHHHHHHHHhcCCCCCCCCCCEEEEECCccchHHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHHHhCCCCc
Q 022298 129 VRPMMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISR-GCSEVHFVEMDPWVVSNVLIPNLEWTGFLDV 207 (299)
Q Consensus 129 ~RPttd~Vrealfn~L~~~~~~~~~~~~~~VLDLfaGSGalgIEAlSr-Ga~~V~~VD~n~~Al~~~a~~N~~~~g~~~~ 207 (299)
.+|......+.+++.+.. ..+.+|||+|||+|.+++.++.+ |+ +|+++|+++.++ +.++++.... .+
T Consensus 36 ~~~~~~~~~~~~~~~~~~-------~~~~~vLdiG~G~G~~~~~l~~~~~~-~v~~vD~s~~~~-~~a~~~~~~~---~~ 103 (266)
T 3ujc_A 36 ISSGGLEATKKILSDIEL-------NENSKVLDIGSGLGGGCMYINEKYGA-HTHGIDICSNIV-NMANERVSGN---NK 103 (266)
T ss_dssp CSTTHHHHHHHHTTTCCC-------CTTCEEEEETCTTSHHHHHHHHHHCC-EEEEEESCHHHH-HHHHHTCCSC---TT
T ss_pred cccchHHHHHHHHHhcCC-------CCCCEEEEECCCCCHHHHHHHHHcCC-EEEEEeCCHHHH-HHHHHHhhcC---CC
Confidence 455555555555444421 35789999999999999998887 55 799999999998 8998887544 45
Q ss_pred EEEEEcchhhHHHHHhhhcCCCCCeeEEEEcCCCC
Q 022298 208 SSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYT 242 (299)
Q Consensus 208 ~~vi~~D~~~~l~~~~~~~~~~~~fDlI~iDPPY~ 242 (299)
++++++|+.+.. ...++||+|++.-...
T Consensus 104 ~~~~~~d~~~~~-------~~~~~fD~v~~~~~l~ 131 (266)
T 3ujc_A 104 IIFEANDILTKE-------FPENNFDLIYSRDAIL 131 (266)
T ss_dssp EEEEECCTTTCC-------CCTTCEEEEEEESCGG
T ss_pred eEEEECccccCC-------CCCCcEEEEeHHHHHH
Confidence 889999987641 1247899999875443
No 190
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=98.66 E-value=2e-08 Score=88.04 Aligned_cols=79 Identities=16% Similarity=-0.017 Sum_probs=64.4
Q ss_pred CCCCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCee
Q 022298 154 LRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFD 233 (299)
Q Consensus 154 ~~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fD 233 (299)
..+.+|||+|||+|.++..++..|+ +|+++|+++.++ +.+++|+...+..++++++++|+.++. ..+.||
T Consensus 65 ~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~-~~a~~~~~~~~~~~~v~~~~~d~~~~~--------~~~~fD 134 (235)
T 3lcc_A 65 LPLGRALVPGCGGGHDVVAMASPER-FVVGLDISESAL-AKANETYGSSPKAEYFSFVKEDVFTWR--------PTELFD 134 (235)
T ss_dssp SCCEEEEEETCTTCHHHHHHCBTTE-EEEEECSCHHHH-HHHHHHHTTSGGGGGEEEECCCTTTCC--------CSSCEE
T ss_pred CCCCCEEEeCCCCCHHHHHHHhCCC-eEEEEECCHHHH-HHHHHHhhccCCCcceEEEECchhcCC--------CCCCee
Confidence 3456999999999999998777666 699999999998 999999877655566899999988743 235899
Q ss_pred EEEEcCCCC
Q 022298 234 YMSVTPPYT 242 (299)
Q Consensus 234 lI~iDPPY~ 242 (299)
+|++...+.
T Consensus 135 ~v~~~~~l~ 143 (235)
T 3lcc_A 135 LIFDYVFFC 143 (235)
T ss_dssp EEEEESSTT
T ss_pred EEEEChhhh
Confidence 999876554
No 191
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=98.66 E-value=1.3e-07 Score=82.37 Aligned_cols=90 Identities=12% Similarity=0.131 Sum_probs=71.2
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEE
Q 022298 133 MEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHT 212 (299)
Q Consensus 133 td~Vrealfn~L~~~~~~~~~~~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~ 212 (299)
.+.+.+.+...+.... ..+.+|||+|||+|.++..++.+|. +++++|+++.++ +.++++....+. ++++++
T Consensus 20 ~~~~~~~~~~~l~~~~-----~~~~~vLdiG~G~G~~~~~l~~~~~-~~~~~D~s~~~~-~~a~~~~~~~~~--~~~~~~ 90 (246)
T 1y8c_A 20 YKKWSDFIIEKCVENN-----LVFDDYLDLACGTGNLTENLCPKFK-NTWAVDLSQEML-SEAENKFRSQGL--KPRLAC 90 (246)
T ss_dssp HHHHHHHHHHHHHTTT-----CCTTEEEEETCTTSTTHHHHGGGSS-EEEEECSCHHHH-HHHHHHHHHTTC--CCEEEC
T ss_pred HHHHHHHHHHHHHHhC-----CCCCeEEEeCCCCCHHHHHHHHCCC-cEEEEECCHHHH-HHHHHHHhhcCC--CeEEEe
Confidence 4455666666665421 2578999999999999998888876 699999999998 999999988775 478899
Q ss_pred cchhhHHHHHhhhcCCCCCeeEEEEcC
Q 022298 213 VRVETFLERAEQFVGKDGPFDYMSVTP 239 (299)
Q Consensus 213 ~D~~~~l~~~~~~~~~~~~fDlI~iDP 239 (299)
+|+.++. ..+.||+|++..
T Consensus 91 ~d~~~~~--------~~~~fD~v~~~~ 109 (246)
T 1y8c_A 91 QDISNLN--------INRKFDLITCCL 109 (246)
T ss_dssp CCGGGCC--------CSCCEEEEEECT
T ss_pred cccccCC--------ccCCceEEEEcC
Confidence 9987642 126899999987
No 192
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=98.65 E-value=6.8e-08 Score=85.05 Aligned_cols=76 Identities=14% Similarity=0.118 Sum_probs=62.3
Q ss_pred CCCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCeeE
Q 022298 155 RPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDY 234 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fDl 234 (299)
.+.+|||+|||+|.++..++.++..+|+++|+++.++ +.+++|+... .+++++++|+.++. ...+.||+
T Consensus 93 ~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~-~~a~~~~~~~---~~~~~~~~d~~~~~-------~~~~~fD~ 161 (254)
T 1xtp_A 93 GTSRALDCGAGIGRITKNLLTKLYATTDLLEPVKHML-EEAKRELAGM---PVGKFILASMETAT-------LPPNTYDL 161 (254)
T ss_dssp CCSEEEEETCTTTHHHHHTHHHHCSEEEEEESCHHHH-HHHHHHTTTS---SEEEEEESCGGGCC-------CCSSCEEE
T ss_pred CCCEEEEECCCcCHHHHHHHHhhcCEEEEEeCCHHHH-HHHHHHhccC---CceEEEEccHHHCC-------CCCCCeEE
Confidence 5789999999999999998888777899999999998 9999887554 45889999987642 12468999
Q ss_pred EEEcCCC
Q 022298 235 MSVTPPY 241 (299)
Q Consensus 235 I~iDPPY 241 (299)
|++.-..
T Consensus 162 v~~~~~l 168 (254)
T 1xtp_A 162 IVIQWTA 168 (254)
T ss_dssp EEEESCG
T ss_pred EEEcchh
Confidence 9986643
No 193
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=98.65 E-value=3e-08 Score=99.09 Aligned_cols=103 Identities=19% Similarity=0.154 Sum_probs=75.4
Q ss_pred CCCCHHHHHHHHHHHHHhcCCCCCCCCCCEEEEECCccchHHHHHHHc----C----------CCEEEEEeCCHHHHHHH
Q 022298 129 VRPMMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISR----G----------CSEVHFVEMDPWVVSNV 194 (299)
Q Consensus 129 ~RPttd~Vrealfn~L~~~~~~~~~~~~~~VLDLfaGSGalgIEAlSr----G----------a~~V~~VD~n~~Al~~~ 194 (299)
--.|+..|.+.+..++.. ..+.+|+|++||||+|-++|..+ + -..++++|+|+.++ .+
T Consensus 198 qfyTP~~Vv~lmv~l~~p-------~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~-~l 269 (530)
T 3ufb_A 198 EFYTPRPVVRFMVEVMDP-------QLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPY-LL 269 (530)
T ss_dssp CCCCCHHHHHHHHHHHCC-------CTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHH-HH
T ss_pred eECCcHHHHHHHHHhhcc-------CCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHH-HH
Confidence 345666677777777764 25679999999999999987642 1 13599999999998 99
Q ss_pred HHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCeeEEEEcCCCCC
Q 022298 195 LIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTA 243 (299)
Q Consensus 195 a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fDlI~iDPPY~~ 243 (299)
++-|+-..|... ..+..+|........ .....+||+|+.||||+.
T Consensus 270 a~mNl~lhg~~~-~~I~~~dtL~~~~~~---~~~~~~fD~Il~NPPf~~ 314 (530)
T 3ufb_A 270 VQMNLLLHGLEY-PRIDPENSLRFPLRE---MGDKDRVDVILTNPPFGG 314 (530)
T ss_dssp HHHHHHHHTCSC-CEEECSCTTCSCGGG---CCGGGCBSEEEECCCSSC
T ss_pred HHHHHHhcCCcc-ccccccccccCchhh---hcccccceEEEecCCCCc
Confidence 999999888754 467778865431000 011357999999999974
No 194
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=98.65 E-value=1.1e-07 Score=85.05 Aligned_cols=79 Identities=15% Similarity=0.159 Sum_probs=66.1
Q ss_pred CCCEEEEECCccchHHHHHHHcC-CCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCee
Q 022298 155 RPGRWLDLYSGTGSVGIEAISRG-CSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFD 233 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSrG-a~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fD 233 (299)
++.+|||+|||+|.++..++.++ ..+|+++|+++.++ +.+++|+...+..+ ++++.+|+.+.. ...++||
T Consensus 37 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~-~~a~~~~~~~~~~~-~~~~~~d~~~~~-------~~~~~fD 107 (276)
T 3mgg_A 37 PGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESL-EKARENTEKNGIKN-VKFLQANIFSLP-------FEDSSFD 107 (276)
T ss_dssp TTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHH-HHHHHHHHHTTCCS-EEEEECCGGGCC-------SCTTCEE
T ss_pred CCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHH-HHHHHHHHHcCCCC-cEEEEcccccCC-------CCCCCee
Confidence 57899999999999999988874 45899999999998 99999999988764 899999988642 1247899
Q ss_pred EEEEcCCCC
Q 022298 234 YMSVTPPYT 242 (299)
Q Consensus 234 lI~iDPPY~ 242 (299)
+|+++-.+.
T Consensus 108 ~v~~~~~l~ 116 (276)
T 3mgg_A 108 HIFVCFVLE 116 (276)
T ss_dssp EEEEESCGG
T ss_pred EEEEechhh
Confidence 999876543
No 195
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=98.65 E-value=5.7e-08 Score=88.59 Aligned_cols=74 Identities=20% Similarity=0.256 Sum_probs=61.4
Q ss_pred CCCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCC--CcEEEEEcchhhHHHHHhhhcCCCCCe
Q 022298 155 RPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFL--DVSSIHTVRVETFLERAEQFVGKDGPF 232 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~--~~~~vi~~D~~~~l~~~~~~~~~~~~f 232 (299)
.+.+|||+|||+|.++..++.+|. +|+++|+++.++ +.+++++...+.. .+++++++|+.++. ..+.|
T Consensus 82 ~~~~vLDlGcG~G~~~~~l~~~~~-~v~gvD~s~~~~-~~a~~~~~~~~~~~~~~v~~~~~d~~~~~--------~~~~f 151 (299)
T 3g2m_A 82 VSGPVLELAAGMGRLTFPFLDLGW-EVTALELSTSVL-AAFRKRLAEAPADVRDRCTLVQGDMSAFA--------LDKRF 151 (299)
T ss_dssp CCSCEEEETCTTTTTHHHHHTTTC-CEEEEESCHHHH-HHHHHHHHTSCHHHHTTEEEEECBTTBCC--------CSCCE
T ss_pred CCCcEEEEeccCCHHHHHHHHcCC-eEEEEECCHHHH-HHHHHHHhhcccccccceEEEeCchhcCC--------cCCCc
Confidence 355999999999999999888886 599999999998 9999999876632 45899999988742 14789
Q ss_pred eEEEEc
Q 022298 233 DYMSVT 238 (299)
Q Consensus 233 DlI~iD 238 (299)
|+|++.
T Consensus 152 D~v~~~ 157 (299)
T 3g2m_A 152 GTVVIS 157 (299)
T ss_dssp EEEEEC
T ss_pred CEEEEC
Confidence 998864
No 196
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=98.65 E-value=1.3e-07 Score=84.53 Aligned_cols=79 Identities=14% Similarity=0.019 Sum_probs=61.8
Q ss_pred CCCEEEEECCccchHHHHHHHcC-CCEEEEEeCCHHHHHHHHHHHHHHh------CCCCcEEEEEcchhhHHHHHhhhcC
Q 022298 155 RPGRWLDLYSGTGSVGIEAISRG-CSEVHFVEMDPWVVSNVLIPNLEWT------GFLDVSSIHTVRVETFLERAEQFVG 227 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSrG-a~~V~~VD~n~~Al~~~a~~N~~~~------g~~~~~~vi~~D~~~~l~~~~~~~~ 227 (299)
.+.+|||+|||+|.+.+.++.+. ...|++||+++.++ +.+++|++.+ +.. +++++++|+.+.+... -
T Consensus 46 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l-~~A~~~~~~l~~~~~~~~~-nv~~~~~d~~~~l~~~----~ 119 (235)
T 3ckk_A 46 AQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVS-DYVQDRIRALRAAPAGGFQ-NIACLRSNAMKHLPNF----F 119 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHH-HHHHHHHHHHHHSTTCCCT-TEEEEECCTTTCHHHH----C
T ss_pred CCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHH-HHHHHHHHHHHHHHhcCCC-eEEEEECcHHHhhhhh----C
Confidence 46789999999999999877663 45799999999998 9999998753 443 4899999998755321 1
Q ss_pred CCCCeeEEEEcC
Q 022298 228 KDGPFDYMSVTP 239 (299)
Q Consensus 228 ~~~~fDlI~iDP 239 (299)
..+.||.|+++-
T Consensus 120 ~~~~~D~v~~~~ 131 (235)
T 3ckk_A 120 YKGQLTKMFFLF 131 (235)
T ss_dssp CTTCEEEEEEES
T ss_pred CCcCeeEEEEeC
Confidence 246899998753
No 197
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=98.64 E-value=5.4e-08 Score=84.68 Aligned_cols=82 Identities=17% Similarity=0.112 Sum_probs=63.7
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcch
Q 022298 136 VKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRV 215 (299)
Q Consensus 136 Vrealfn~L~~~~~~~~~~~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~ 215 (299)
..+.+...+... ..+.+|||+|||+|.++..++.+|. +|+++|+++.++ +.++++... +++++++|+
T Consensus 29 ~~~~~~~~l~~~------~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~-~~a~~~~~~-----~v~~~~~d~ 95 (250)
T 2p7i_A 29 MHPFMVRAFTPF------FRPGNLLELGSFKGDFTSRLQEHFN-DITCVEASEEAI-SHAQGRLKD-----GITYIHSRF 95 (250)
T ss_dssp HHHHHHHHHGGG------CCSSCEEEESCTTSHHHHHHTTTCS-CEEEEESCHHHH-HHHHHHSCS-----CEEEEESCG
T ss_pred HHHHHHHHHHhh------cCCCcEEEECCCCCHHHHHHHHhCC-cEEEEeCCHHHH-HHHHHhhhC-----CeEEEEccH
Confidence 444555666542 3578999999999999998888877 699999999998 888887532 478999998
Q ss_pred hhHHHHHhhhcCCCCCeeEEEEc
Q 022298 216 ETFLERAEQFVGKDGPFDYMSVT 238 (299)
Q Consensus 216 ~~~l~~~~~~~~~~~~fDlI~iD 238 (299)
.+.. ..++||+|++.
T Consensus 96 ~~~~--------~~~~fD~v~~~ 110 (250)
T 2p7i_A 96 EDAQ--------LPRRYDNIVLT 110 (250)
T ss_dssp GGCC--------CSSCEEEEEEE
T ss_pred HHcC--------cCCcccEEEEh
Confidence 7752 24689999973
No 198
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=98.63 E-value=5.8e-08 Score=88.88 Aligned_cols=77 Identities=14% Similarity=0.097 Sum_probs=55.3
Q ss_pred CCCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCeeE
Q 022298 155 RPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDY 234 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fDl 234 (299)
++.+|||+|||+|.+++.++.+|+ +|++||+|+.++ +.+++|+.... ++.++.+...... ....++||+
T Consensus 45 ~g~~VLDlGcGtG~~a~~La~~g~-~V~gvD~S~~ml-~~Ar~~~~~~~-------v~~~~~~~~~~~~--~~~~~~fD~ 113 (261)
T 3iv6_A 45 PGSTVAVIGASTRFLIEKALERGA-SVTVFDFSQRMC-DDLAEALADRC-------VTIDLLDITAEIP--KELAGHFDF 113 (261)
T ss_dssp TTCEEEEECTTCHHHHHHHHHTTC-EEEEEESCHHHH-HHHHHHTSSSC-------CEEEECCTTSCCC--GGGTTCCSE
T ss_pred CcCEEEEEeCcchHHHHHHHhcCC-EEEEEECCHHHH-HHHHHHHHhcc-------ceeeeeecccccc--cccCCCccE
Confidence 578999999999999999999987 799999999998 99999976541 1222222110000 001368999
Q ss_pred EEEcCCCC
Q 022298 235 MSVTPPYT 242 (299)
Q Consensus 235 I~iDPPY~ 242 (299)
|+++....
T Consensus 114 Vv~~~~l~ 121 (261)
T 3iv6_A 114 VLNDRLIN 121 (261)
T ss_dssp EEEESCGG
T ss_pred EEEhhhhH
Confidence 99998654
No 199
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=98.63 E-value=1.9e-07 Score=80.09 Aligned_cols=86 Identities=21% Similarity=0.198 Sum_probs=64.4
Q ss_pred HHHHHHHHhcCCCCCCCCCCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhh
Q 022298 138 GAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVET 217 (299)
Q Consensus 138 ealfn~L~~~~~~~~~~~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~ 217 (299)
..++..+.. ..+.+|||+|||+|.++..++.+|+ +|+++|+++.++ +.++++ ....++.+|+.+
T Consensus 42 ~~~~~~~~~-------~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~-~~a~~~-------~~~~~~~~~~~~ 105 (227)
T 3e8s_A 42 QAILLAILG-------RQPERVLDLGCGEGWLLRALADRGI-EAVGVDGDRTLV-DAARAA-------GAGEVHLASYAQ 105 (227)
T ss_dssp HHHHHHHHH-------TCCSEEEEETCTTCHHHHHHHTTTC-EEEEEESCHHHH-HHHHHT-------CSSCEEECCHHH
T ss_pred HHHHHHhhc-------CCCCEEEEeCCCCCHHHHHHHHCCC-EEEEEcCCHHHH-HHHHHh-------cccccchhhHHh
Confidence 445555554 3578999999999999999888877 799999999998 888887 224578888877
Q ss_pred HHHHHhhhcCCCCCeeEEEEcCCCC
Q 022298 218 FLERAEQFVGKDGPFDYMSVTPPYT 242 (299)
Q Consensus 218 ~l~~~~~~~~~~~~fDlI~iDPPY~ 242 (299)
+.... .....+||+|++...+.
T Consensus 106 ~~~~~---~~~~~~fD~v~~~~~l~ 127 (227)
T 3e8s_A 106 LAEAK---VPVGKDYDLICANFALL 127 (227)
T ss_dssp HHTTC---SCCCCCEEEEEEESCCC
T ss_pred hcccc---cccCCCccEEEECchhh
Confidence 53211 11235699999987766
No 200
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=98.62 E-value=1.5e-07 Score=80.26 Aligned_cols=74 Identities=15% Similarity=0.018 Sum_probs=61.8
Q ss_pred CCCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCeeE
Q 022298 155 RPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDY 234 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fDl 234 (299)
.+ +|||+|||+|.++..++.+|+ +|+++|+++.++ +.++++....+. +++++++|+.+.. ...+.||+
T Consensus 30 ~~-~vLdiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~-~~a~~~~~~~~~--~~~~~~~d~~~~~-------~~~~~fD~ 97 (202)
T 2kw5_A 30 QG-KILCLAEGEGRNACFLASLGY-EVTAVDQSSVGL-AKAKQLAQEKGV--KITTVQSNLADFD-------IVADAWEG 97 (202)
T ss_dssp SS-EEEECCCSCTHHHHHHHTTTC-EEEEECSSHHHH-HHHHHHHHHHTC--CEEEECCBTTTBS-------CCTTTCSE
T ss_pred CC-CEEEECCCCCHhHHHHHhCCC-eEEEEECCHHHH-HHHHHHHHhcCC--ceEEEEcChhhcC-------CCcCCccE
Confidence 35 999999999999998888876 799999999998 999999988876 4788999987642 12468999
Q ss_pred EEEcCC
Q 022298 235 MSVTPP 240 (299)
Q Consensus 235 I~iDPP 240 (299)
|++...
T Consensus 98 v~~~~~ 103 (202)
T 2kw5_A 98 IVSIFC 103 (202)
T ss_dssp EEEECC
T ss_pred EEEEhh
Confidence 998643
No 201
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=98.62 E-value=1.3e-07 Score=82.42 Aligned_cols=76 Identities=14% Similarity=0.006 Sum_probs=62.0
Q ss_pred CCCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCeeE
Q 022298 155 RPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDY 234 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fDl 234 (299)
.+.+|||+|||+|.++..++.+|..+|+++|+++.++ +.++++... ++++++++|+.+.. ...+.||+
T Consensus 43 ~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~-~~a~~~~~~----~~~~~~~~d~~~~~-------~~~~~fD~ 110 (243)
T 3bkw_A 43 GGLRIVDLGCGFGWFCRWAHEHGASYVLGLDLSEKML-ARARAAGPD----TGITYERADLDKLH-------LPQDSFDL 110 (243)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHH-HHHHHTSCS----SSEEEEECCGGGCC-------CCTTCEEE
T ss_pred CCCEEEEEcCcCCHHHHHHHHCCCCeEEEEcCCHHHH-HHHHHhccc----CCceEEEcChhhcc-------CCCCCceE
Confidence 5789999999999999998888876899999999998 888887643 24889999987642 12468999
Q ss_pred EEEcCCCC
Q 022298 235 MSVTPPYT 242 (299)
Q Consensus 235 I~iDPPY~ 242 (299)
|++.....
T Consensus 111 v~~~~~l~ 118 (243)
T 3bkw_A 111 AYSSLALH 118 (243)
T ss_dssp EEEESCGG
T ss_pred EEEecccc
Confidence 99987654
No 202
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=98.61 E-value=9.1e-08 Score=83.79 Aligned_cols=80 Identities=16% Similarity=0.076 Sum_probs=64.6
Q ss_pred CCCEEEEECCccchHHHHHHHc-CC------CEEEEEeCCHHHHHHHHHHHHHHhC-----CCCcEEEEEcchhhHHHHH
Q 022298 155 RPGRWLDLYSGTGSVGIEAISR-GC------SEVHFVEMDPWVVSNVLIPNLEWTG-----FLDVSSIHTVRVETFLERA 222 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSr-Ga------~~V~~VD~n~~Al~~~a~~N~~~~g-----~~~~~~vi~~D~~~~l~~~ 222 (299)
++.+|||+|||+|.++..++.+ |. .+|+++|+++.++ +.+++|++.++ . ++++++.+|+.+.+.
T Consensus 84 ~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~-~~a~~~~~~~~~~~~~~-~~v~~~~~d~~~~~~-- 159 (227)
T 1r18_A 84 PGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELV-RRSKANLNTDDRSMLDS-GQLLIVEGDGRKGYP-- 159 (227)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHH-HHHHHHHHHHHHHHHHH-TSEEEEESCGGGCCG--
T ss_pred CCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHH-HHHHHHHHhcCccccCC-CceEEEECCcccCCC--
Confidence 5789999999999999987764 42 4799999999998 99999998876 3 348899999876321
Q ss_pred hhhcCCCCCeeEEEEcCCCCC
Q 022298 223 EQFVGKDGPFDYMSVTPPYTA 243 (299)
Q Consensus 223 ~~~~~~~~~fDlI~iDPPY~~ 243 (299)
..+.||+|+++.+...
T Consensus 160 -----~~~~fD~I~~~~~~~~ 175 (227)
T 1r18_A 160 -----PNAPYNAIHVGAAAPD 175 (227)
T ss_dssp -----GGCSEEEEEECSCBSS
T ss_pred -----cCCCccEEEECCchHH
Confidence 1268999999998754
No 203
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=98.61 E-value=8.2e-08 Score=85.80 Aligned_cols=82 Identities=15% Similarity=0.097 Sum_probs=64.5
Q ss_pred CCCEEEEECCccchHHHHHHHc-CC-CEEEEEeCCHH------HHHHHHHHHHHHhCCCCcEEEEEcc-hhhHHHHHhhh
Q 022298 155 RPGRWLDLYSGTGSVGIEAISR-GC-SEVHFVEMDPW------VVSNVLIPNLEWTGFLDVSSIHTVR-VETFLERAEQF 225 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSr-Ga-~~V~~VD~n~~------Al~~~a~~N~~~~g~~~~~~vi~~D-~~~~l~~~~~~ 225 (299)
.+.+|||+|||+|.+++.++.+ |. .+|+++|+++. ++ +.+++|++..++.++++++.+| ..... +
T Consensus 43 ~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~-~~a~~~~~~~~~~~~v~~~~~d~~~~~~-----~ 116 (275)
T 3bkx_A 43 PGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTL-GQAWNHLLAGPLGDRLTVHFNTNLSDDL-----G 116 (275)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCH-HHHHHHHHTSTTGGGEEEECSCCTTTCC-----G
T ss_pred CCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHH-HHHHHHHHhcCCCCceEEEECChhhhcc-----C
Confidence 5789999999999999998887 43 58999999997 87 8999999988876678999988 32110 0
Q ss_pred cCCCCCeeEEEEcCCCC
Q 022298 226 VGKDGPFDYMSVTPPYT 242 (299)
Q Consensus 226 ~~~~~~fDlI~iDPPY~ 242 (299)
....++||+|++...+.
T Consensus 117 ~~~~~~fD~v~~~~~l~ 133 (275)
T 3bkx_A 117 PIADQHFDRVVLAHSLW 133 (275)
T ss_dssp GGTTCCCSEEEEESCGG
T ss_pred CCCCCCEEEEEEccchh
Confidence 11246899999988764
No 204
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=98.60 E-value=2.1e-07 Score=81.24 Aligned_cols=72 Identities=15% Similarity=0.115 Sum_probs=60.1
Q ss_pred CCCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCeeE
Q 022298 155 RPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDY 234 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fDl 234 (299)
.+.+|||+|||+|.+++.++.+ .+|+++|+++.++ +.+++|+...+. +++++++|+.+.. ..++||+
T Consensus 33 ~~~~vLdiG~G~G~~~~~l~~~--~~v~~vD~s~~~~-~~a~~~~~~~~~--~~~~~~~d~~~~~--------~~~~fD~ 99 (243)
T 3d2l_A 33 PGKRIADIGCGTGTATLLLADH--YEVTGVDLSEEML-EIAQEKAMETNR--HVDFWVQDMRELE--------LPEPVDA 99 (243)
T ss_dssp TTCEEEEESCTTCHHHHHHTTT--SEEEEEESCHHHH-HHHHHHHHHTTC--CCEEEECCGGGCC--------CSSCEEE
T ss_pred CCCeEEEecCCCCHHHHHHhhC--CeEEEEECCHHHH-HHHHHhhhhcCC--ceEEEEcChhhcC--------CCCCcCE
Confidence 3689999999999999987776 5899999999998 999999987763 4788999987642 1368999
Q ss_pred EEEcC
Q 022298 235 MSVTP 239 (299)
Q Consensus 235 I~iDP 239 (299)
|++..
T Consensus 100 v~~~~ 104 (243)
T 3d2l_A 100 ITILC 104 (243)
T ss_dssp EEECT
T ss_pred EEEeC
Confidence 99975
No 205
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=98.60 E-value=1.8e-07 Score=80.05 Aligned_cols=71 Identities=17% Similarity=0.090 Sum_probs=58.4
Q ss_pred CCCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCeeE
Q 022298 155 RPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDY 234 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fDl 234 (299)
.+.+|||+|||+|.++..++.+|+ +|+++|+++.++ +.+++ .+. .+++++++|+.++. ..++||+
T Consensus 46 ~~~~vLdiG~G~G~~~~~l~~~~~-~v~~~D~s~~~~-~~a~~----~~~-~~~~~~~~d~~~~~--------~~~~~D~ 110 (218)
T 3ou2_A 46 IRGDVLELASGTGYWTRHLSGLAD-RVTALDGSAEMI-AEAGR----HGL-DNVEFRQQDLFDWT--------PDRQWDA 110 (218)
T ss_dssp SCSEEEEESCTTSHHHHHHHHHSS-EEEEEESCHHHH-HHHGG----GCC-TTEEEEECCTTSCC--------CSSCEEE
T ss_pred CCCeEEEECCCCCHHHHHHHhcCC-eEEEEeCCHHHH-HHHHh----cCC-CCeEEEecccccCC--------CCCceeE
Confidence 467999999999999999888876 799999999998 88877 444 34899999987652 2478999
Q ss_pred EEEcCC
Q 022298 235 MSVTPP 240 (299)
Q Consensus 235 I~iDPP 240 (299)
|++.--
T Consensus 111 v~~~~~ 116 (218)
T 3ou2_A 111 VFFAHW 116 (218)
T ss_dssp EEEESC
T ss_pred EEEech
Confidence 998753
No 206
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=98.60 E-value=1.2e-07 Score=85.50 Aligned_cols=103 Identities=13% Similarity=-0.066 Sum_probs=75.6
Q ss_pred CCCCHHHHHHHHHHHHHhcCCCCCCCCCCEEEEECCccchHHHHHHHc-C-CCEEEEEeCCHHHHHHHHHHHHHHhCCCC
Q 022298 129 VRPMMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISR-G-CSEVHFVEMDPWVVSNVLIPNLEWTGFLD 206 (299)
Q Consensus 129 ~RPttd~Vrealfn~L~~~~~~~~~~~~~~VLDLfaGSGalgIEAlSr-G-a~~V~~VD~n~~Al~~~a~~N~~~~g~~~ 206 (299)
..|.-+++..++++-+.... ..+|.+|||+|||+|.+...++.. | ..+|++||++++++ +.+++|++..+
T Consensus 55 w~p~rsklaa~i~~gl~~l~----ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~-~~l~~~a~~~~--- 126 (233)
T 4df3_A 55 WNAYRSKLAAALLKGLIELP----VKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVM-RDLLTVVRDRR--- 126 (233)
T ss_dssp CCTTTCHHHHHHHTTCSCCC----CCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHH-HHHHHHSTTCT---
T ss_pred ECCCchHHHHHHHhchhhcC----CCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHH-HHHHHhhHhhc---
Confidence 45666677777776654321 136899999999999999987654 4 35899999999998 88888876542
Q ss_pred cEEEEEcchhhHHHHHhhhcCCCCCeeEEEEcCCCCC
Q 022298 207 VSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTA 243 (299)
Q Consensus 207 ~~~vi~~D~~~~l~~~~~~~~~~~~fDlI~iDPPY~~ 243 (299)
++..+.+|+...... ......+|+||+|.++..
T Consensus 127 ni~~V~~d~~~p~~~----~~~~~~vDvVf~d~~~~~ 159 (233)
T 4df3_A 127 NIFPILGDARFPEKY----RHLVEGVDGLYADVAQPE 159 (233)
T ss_dssp TEEEEESCTTCGGGG----TTTCCCEEEEEECCCCTT
T ss_pred CeeEEEEeccCcccc----ccccceEEEEEEeccCCh
Confidence 477888887654321 123468999999998874
No 207
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.58 E-value=2e-07 Score=78.01 Aligned_cols=72 Identities=17% Similarity=0.196 Sum_probs=58.8
Q ss_pred CCCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCeeE
Q 022298 155 RPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDY 234 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fDl 234 (299)
.+.+|||+|||+|.++..++.+|. +++++|+++.++ +.+++|.. +++++++|+.+.. ...+.||+
T Consensus 46 ~~~~vLdiG~G~G~~~~~l~~~~~-~v~~~D~~~~~~-~~a~~~~~------~~~~~~~d~~~~~-------~~~~~~D~ 110 (195)
T 3cgg_A 46 RGAKILDAGCGQGRIGGYLSKQGH-DVLGTDLDPILI-DYAKQDFP------EARWVVGDLSVDQ-------ISETDFDL 110 (195)
T ss_dssp TTCEEEEETCTTTHHHHHHHHTTC-EEEEEESCHHHH-HHHHHHCT------TSEEEECCTTTSC-------CCCCCEEE
T ss_pred CCCeEEEECCCCCHHHHHHHHCCC-cEEEEcCCHHHH-HHHHHhCC------CCcEEEcccccCC-------CCCCceeE
Confidence 578999999999999999888876 799999999998 89888752 2678889987631 12468999
Q ss_pred EEEcCCC
Q 022298 235 MSVTPPY 241 (299)
Q Consensus 235 I~iDPPY 241 (299)
|+++|+.
T Consensus 111 i~~~~~~ 117 (195)
T 3cgg_A 111 IVSAGNV 117 (195)
T ss_dssp EEECCCC
T ss_pred EEECCcH
Confidence 9999764
No 208
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=98.57 E-value=2.3e-07 Score=79.28 Aligned_cols=75 Identities=12% Similarity=0.032 Sum_probs=58.7
Q ss_pred CCCEEEEECCccchHHHHHHH-cCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCee
Q 022298 155 RPGRWLDLYSGTGSVGIEAIS-RGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFD 233 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlS-rGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fD 233 (299)
.+.+|||+|||+|.+.+.++. .|+ +|+++|+|+.++ +.++++++..+. +++++++|+.+.. ...++||
T Consensus 23 ~~~~vLDiGcG~G~~~~~~~~~~~~-~v~~vD~s~~~~-~~a~~~~~~~~~--~~~~~~~d~~~~~-------~~~~~fD 91 (209)
T 2p8j_A 23 LDKTVLDCGAGGDLPPLSIFVEDGY-KTYGIEISDLQL-KKAENFSRENNF--KLNISKGDIRKLP-------FKDESMS 91 (209)
T ss_dssp SCSEEEEESCCSSSCTHHHHHHTTC-EEEEEECCHHHH-HHHHHHHHHHTC--CCCEEECCTTSCC-------SCTTCEE
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCC-EEEEEECCHHHH-HHHHHHHHhcCC--ceEEEECchhhCC-------CCCCcee
Confidence 478999999999998655544 454 799999999998 999999987763 3678899987531 1246899
Q ss_pred EEEEcCC
Q 022298 234 YMSVTPP 240 (299)
Q Consensus 234 lI~iDPP 240 (299)
+|++.-.
T Consensus 92 ~v~~~~~ 98 (209)
T 2p8j_A 92 FVYSYGT 98 (209)
T ss_dssp EEEECSC
T ss_pred EEEEcCh
Confidence 9998644
No 209
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=98.57 E-value=1.3e-07 Score=82.90 Aligned_cols=78 Identities=12% Similarity=-0.049 Sum_probs=57.4
Q ss_pred CCCEEEEECCccchHHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCee
Q 022298 155 RPGRWLDLYSGTGSVGIEAISR-GCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFD 233 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSr-Ga~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fD 233 (299)
++.+|||+|||||.++..++.+ |..+|++||+++.++ +.+.++++.. +++.++.+|+....... ...+.||
T Consensus 57 ~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l-~~~~~~a~~~---~~v~~~~~d~~~~~~~~----~~~~~fD 128 (210)
T 1nt2_A 57 GDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPF-EKLLELVRER---NNIIPLLFDASKPWKYS----GIVEKVD 128 (210)
T ss_dssp SSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHH-HHHHHHHHHC---SSEEEECSCTTCGGGTT----TTCCCEE
T ss_pred CCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHH-HHHHHHHhcC---CCeEEEEcCCCCchhhc----cccccee
Confidence 5789999999999999887765 335899999999987 7666666543 24777888876531100 1136899
Q ss_pred EEEEcCC
Q 022298 234 YMSVTPP 240 (299)
Q Consensus 234 lI~iDPP 240 (299)
+|++|.+
T Consensus 129 ~V~~~~~ 135 (210)
T 1nt2_A 129 LIYQDIA 135 (210)
T ss_dssp EEEECCC
T ss_pred EEEEecc
Confidence 9999954
No 210
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=98.56 E-value=7.9e-08 Score=90.55 Aligned_cols=74 Identities=22% Similarity=0.214 Sum_probs=60.5
Q ss_pred CCCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCeeE
Q 022298 155 RPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDY 234 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fDl 234 (299)
.+.+++|||||+|.+++++.+.|+..|.++|+|+.|+ +..+.|..... ++|+.++.... -..+|+
T Consensus 10 ~~~~~~dLFaG~Gg~~~g~~~aG~~~v~~~e~d~~a~-~t~~~N~~~~~--------~~Di~~~~~~~------~~~~D~ 74 (327)
T 2c7p_A 10 TGLRFIDLFAGLGGFRLALESCGAECVYSNEWDKYAQ-EVYEMNFGEKP--------EGDITQVNEKT------IPDHDI 74 (327)
T ss_dssp TTCEEEEETCTTTHHHHHHHHTTCEEEEEECCCHHHH-HHHHHHHSCCC--------BSCGGGSCGGG------SCCCSE
T ss_pred CCCcEEEECCCcCHHHHHHHHCCCeEEEEEeCCHHHH-HHHHHHcCCCC--------cCCHHHcCHhh------CCCCCE
Confidence 4679999999999999999999999999999999997 99999973221 57887764221 246999
Q ss_pred EEEcCCCCC
Q 022298 235 MSVTPPYTA 243 (299)
Q Consensus 235 I~iDPPY~~ 243 (299)
|+.+||+..
T Consensus 75 l~~gpPCQ~ 83 (327)
T 2c7p_A 75 LCAGFPCQA 83 (327)
T ss_dssp EEEECCCTT
T ss_pred EEECCCCCC
Confidence 999999974
No 211
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=98.56 E-value=2.2e-07 Score=88.80 Aligned_cols=83 Identities=17% Similarity=0.179 Sum_probs=68.7
Q ss_pred CCCCEEEEECCccchHHHHHHHcCC-CEEEEEeCCHHHHHHHHHHHHHHhCCC-----CcEEEEEcchhhHHHHHhhhcC
Q 022298 154 LRPGRWLDLYSGTGSVGIEAISRGC-SEVHFVEMDPWVVSNVLIPNLEWTGFL-----DVSSIHTVRVETFLERAEQFVG 227 (299)
Q Consensus 154 ~~~~~VLDLfaGSGalgIEAlSrGa-~~V~~VD~n~~Al~~~a~~N~~~~g~~-----~~~~vi~~D~~~~l~~~~~~~~ 227 (299)
.+|.+|||+|||.|+=++.++..+. ..++++|+++..+ +.+++|++.++.. +++.+...|+..+....
T Consensus 147 ~pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~-~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~~----- 220 (359)
T 4fzv_A 147 QPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRI-ARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELE----- 220 (359)
T ss_dssp CTTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHH-HHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHHHS-----
T ss_pred CCCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHH-HHHHHHHHHhhhhhhccCCceEEEeCchhhcchhc-----
Confidence 3688999999999999888777654 3699999999998 9999999998763 35788889988765432
Q ss_pred CCCCeeEEEEcCCCCC
Q 022298 228 KDGPFDYMSVTPPYTA 243 (299)
Q Consensus 228 ~~~~fDlI~iDPPY~~ 243 (299)
.+.||.|++|+|...
T Consensus 221 -~~~fD~VLlDaPCSg 235 (359)
T 4fzv_A 221 -GDTYDRVLVDVPCTT 235 (359)
T ss_dssp -TTCEEEEEEECCCCC
T ss_pred -cccCCEEEECCccCC
Confidence 468999999999875
No 212
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=98.55 E-value=2e-07 Score=82.32 Aligned_cols=76 Identities=16% Similarity=0.169 Sum_probs=60.9
Q ss_pred CCCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCeeE
Q 022298 155 RPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDY 234 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fDl 234 (299)
.+.+|||+|||+|.+++.++.+|+ +|+++|+++.++ +.+++|+ ..+ ..+++++.+|+.++. ...+.||+
T Consensus 39 ~~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~-~~a~~~~-~~~-~~~~~~~~~d~~~~~-------~~~~~fD~ 107 (263)
T 2yqz_A 39 EEPVFLELGVGTGRIALPLIARGY-RYIALDADAAML-EVFRQKI-AGV-DRKVQVVQADARAIP-------LPDESVHG 107 (263)
T ss_dssp SCCEEEEETCTTSTTHHHHHTTTC-EEEEEESCHHHH-HHHHHHT-TTS-CTTEEEEESCTTSCC-------SCTTCEEE
T ss_pred CCCEEEEeCCcCCHHHHHHHHCCC-EEEEEECCHHHH-HHHHHHh-hcc-CCceEEEEcccccCC-------CCCCCeeE
Confidence 578999999999999999888875 799999999998 9999987 222 345889999987542 12468999
Q ss_pred EEEcCCC
Q 022298 235 MSVTPPY 241 (299)
Q Consensus 235 I~iDPPY 241 (299)
|++.-.+
T Consensus 108 v~~~~~l 114 (263)
T 2yqz_A 108 VIVVHLW 114 (263)
T ss_dssp EEEESCG
T ss_pred EEECCch
Confidence 9987543
No 213
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=98.55 E-value=2.2e-07 Score=82.72 Aligned_cols=69 Identities=14% Similarity=0.089 Sum_probs=57.7
Q ss_pred CCCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCeeE
Q 022298 155 RPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDY 234 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fDl 234 (299)
.+.+|||+|||+|.++..++.+|. +|+++|+++.++ +.++++.. +++++++|+.++. ..+.||+
T Consensus 50 ~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~-~~a~~~~~------~~~~~~~d~~~~~--------~~~~fD~ 113 (263)
T 3pfg_A 50 KAASLLDVACGTGMHLRHLADSFG-TVEGLELSADML-AIARRRNP------DAVLHHGDMRDFS--------LGRRFSA 113 (263)
T ss_dssp TCCEEEEETCTTSHHHHHHTTTSS-EEEEEESCHHHH-HHHHHHCT------TSEEEECCTTTCC--------CSCCEEE
T ss_pred CCCcEEEeCCcCCHHHHHHHHcCC-eEEEEECCHHHH-HHHHhhCC------CCEEEECChHHCC--------ccCCcCE
Confidence 468999999999999998888876 799999999998 89888743 3678999987642 1478999
Q ss_pred EEEcC
Q 022298 235 MSVTP 239 (299)
Q Consensus 235 I~iDP 239 (299)
|++..
T Consensus 114 v~~~~ 118 (263)
T 3pfg_A 114 VTCMF 118 (263)
T ss_dssp EEECT
T ss_pred EEEcC
Confidence 99976
No 214
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=98.55 E-value=1.2e-07 Score=81.70 Aligned_cols=73 Identities=19% Similarity=0.115 Sum_probs=59.0
Q ss_pred CCCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCeeE
Q 022298 155 RPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDY 234 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fDl 234 (299)
.+.+|||+|||+|.++..++.+|+ +|+++|+++.++ +.+++++. .+++++++|+.++. .. ++||+
T Consensus 45 ~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~-~~a~~~~~-----~~~~~~~~d~~~~~-------~~-~~fD~ 109 (220)
T 3hnr_A 45 SFGNVLEFGVGTGNLTNKLLLAGR-TVYGIEPSREMR-MIAKEKLP-----KEFSITEGDFLSFE-------VP-TSIDT 109 (220)
T ss_dssp CCSEEEEECCTTSHHHHHHHHTTC-EEEEECSCHHHH-HHHHHHSC-----TTCCEESCCSSSCC-------CC-SCCSE
T ss_pred CCCeEEEeCCCCCHHHHHHHhCCC-eEEEEeCCHHHH-HHHHHhCC-----CceEEEeCChhhcC-------CC-CCeEE
Confidence 578999999999999999888876 799999999998 88888764 34678888887642 12 68999
Q ss_pred EEEcCCCC
Q 022298 235 MSVTPPYT 242 (299)
Q Consensus 235 I~iDPPY~ 242 (299)
|+++-...
T Consensus 110 v~~~~~l~ 117 (220)
T 3hnr_A 110 IVSTYAFH 117 (220)
T ss_dssp EEEESCGG
T ss_pred EEECcchh
Confidence 99875443
No 215
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.54 E-value=2.4e-07 Score=79.09 Aligned_cols=71 Identities=17% Similarity=0.106 Sum_probs=58.3
Q ss_pred CCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCeeEE
Q 022298 156 PGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDYM 235 (299)
Q Consensus 156 ~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fDlI 235 (299)
+.+|||+|||+|.++..++.+|+ +|+++|+++.++ +.+++|. .+++++++|+.++. ...++||+|
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~-~~a~~~~------~~~~~~~~d~~~~~-------~~~~~fD~v 106 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASLGH-QIEGLEPATRLV-ELARQTH------PSVTFHHGTITDLS-------DSPKRWAGL 106 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHTTC-CEEEECCCHHHH-HHHHHHC------TTSEEECCCGGGGG-------GSCCCEEEE
T ss_pred CCeEEEecCCCCHHHHHHHhcCC-eEEEEeCCHHHH-HHHHHhC------CCCeEEeCcccccc-------cCCCCeEEE
Confidence 67999999999999999888887 699999999998 8888872 24788999987742 124789999
Q ss_pred EEcCCC
Q 022298 236 SVTPPY 241 (299)
Q Consensus 236 ~iDPPY 241 (299)
++.-..
T Consensus 107 ~~~~~l 112 (203)
T 3h2b_A 107 LAWYSL 112 (203)
T ss_dssp EEESSS
T ss_pred EehhhH
Confidence 996543
No 216
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=98.54 E-value=2.4e-07 Score=75.79 Aligned_cols=75 Identities=9% Similarity=-0.020 Sum_probs=55.3
Q ss_pred CCCEEEEECCccchHHHHHHHc-CC-CEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHH--HHhhhcCCCC
Q 022298 155 RPGRWLDLYSGTGSVGIEAISR-GC-SEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLE--RAEQFVGKDG 230 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSr-Ga-~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~--~~~~~~~~~~ 230 (299)
.+.+|||+|||+|.++..++.+ |. .+++++|+++ ++ +. .+++++++|+.+... ..... ...+
T Consensus 22 ~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~-~~-----------~~~~~~~~d~~~~~~~~~~~~~-~~~~ 87 (180)
T 1ej0_A 22 PGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MD-PI-----------VGVDFLQGDFRDELVMKALLER-VGDS 87 (180)
T ss_dssp TTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CC-CC-----------TTEEEEESCTTSHHHHHHHHHH-HTTC
T ss_pred CCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cc-cc-----------CcEEEEEcccccchhhhhhhcc-CCCC
Confidence 5779999999999999998877 53 6899999999 65 32 347889999876521 00000 1246
Q ss_pred CeeEEEEcCCCCC
Q 022298 231 PFDYMSVTPPYTA 243 (299)
Q Consensus 231 ~fDlI~iDPPY~~ 243 (299)
+||+|++|+|+..
T Consensus 88 ~~D~i~~~~~~~~ 100 (180)
T 1ej0_A 88 KVQVVMSDMAPNM 100 (180)
T ss_dssp CEEEEEECCCCCC
T ss_pred ceeEEEECCCccc
Confidence 8999999999764
No 217
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=98.54 E-value=1.2e-07 Score=85.78 Aligned_cols=78 Identities=15% Similarity=0.029 Sum_probs=59.4
Q ss_pred CCCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHH----------hC------CCCcEEEEEcchhhH
Q 022298 155 RPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEW----------TG------FLDVSSIHTVRVETF 218 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~----------~g------~~~~~~vi~~D~~~~ 218 (299)
.+.+|||+|||+|..++.++.+|. +|++||+++.++ +.++++... .+ ...+++++++|+.++
T Consensus 68 ~~~~vLD~GCG~G~~~~~La~~G~-~V~gvD~S~~~i-~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~l 145 (252)
T 2gb4_A 68 SGLRVFFPLCGKAIEMKWFADRGH-TVVGVEISEIGI-REFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDL 145 (252)
T ss_dssp CSCEEEETTCTTCTHHHHHHHTTC-EEEEECSCHHHH-HHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTTG
T ss_pred CCCeEEEeCCCCcHHHHHHHHCCC-eEEEEECCHHHH-HHHHHhcccccccccccccccccccccCCCceEEEECccccC
Confidence 578999999999999999989998 799999999998 888765421 00 123589999999875
Q ss_pred HHHHhhhcCCCCCeeEEEEcCC
Q 022298 219 LERAEQFVGKDGPFDYMSVTPP 240 (299)
Q Consensus 219 l~~~~~~~~~~~~fDlI~iDPP 240 (299)
.. ...++||+|+..--
T Consensus 146 ~~------~~~~~FD~V~~~~~ 161 (252)
T 2gb4_A 146 PR------ANIGKFDRIWDRGA 161 (252)
T ss_dssp GG------GCCCCEEEEEESSS
T ss_pred Cc------ccCCCEEEEEEhhh
Confidence 31 11268999996543
No 218
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=98.52 E-value=9.6e-08 Score=85.52 Aligned_cols=90 Identities=17% Similarity=0.053 Sum_probs=68.5
Q ss_pred CCCCHHHHHHHHHHHHHhcCCCCCCCCCCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcE
Q 022298 129 VRPMMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVS 208 (299)
Q Consensus 129 ~RPttd~Vrealfn~L~~~~~~~~~~~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~ 208 (299)
.++....+.+.+.+.+.. ..+.+|||+|||+|.+++.++..|+ +|+++|+++.++ +.++++. ++
T Consensus 15 ~~~~~~~~~~~l~~~~~~-------~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~-~~a~~~~-------~~ 78 (261)
T 3ege_A 15 TRVPDIRIVNAIINLLNL-------PKGSVIADIGAGTGGYSVALANQGL-FVYAVEPSIVMR-QQAVVHP-------QV 78 (261)
T ss_dssp SBCCCHHHHHHHHHHHCC-------CTTCEEEEETCTTSHHHHHHHTTTC-EEEEECSCHHHH-HSSCCCT-------TE
T ss_pred cccccHHHHHHHHHHhCC-------CCCCEEEEEcCcccHHHHHHHhCCC-EEEEEeCCHHHH-HHHHhcc-------CC
Confidence 355555677777777643 2578999999999999999888775 799999999987 7666554 47
Q ss_pred EEEEcchhhHHHHHhhhcCCCCCeeEEEEcCCC
Q 022298 209 SIHTVRVETFLERAEQFVGKDGPFDYMSVTPPY 241 (299)
Q Consensus 209 ~vi~~D~~~~l~~~~~~~~~~~~fDlI~iDPPY 241 (299)
+++++|+.++. ...++||+|++.-..
T Consensus 79 ~~~~~d~~~~~-------~~~~~fD~v~~~~~l 104 (261)
T 3ege_A 79 EWFTGYAENLA-------LPDKSVDGVISILAI 104 (261)
T ss_dssp EEECCCTTSCC-------SCTTCBSEEEEESCG
T ss_pred EEEECchhhCC-------CCCCCEeEEEEcchH
Confidence 88999987632 124689999987654
No 219
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=98.52 E-value=6.9e-08 Score=91.34 Aligned_cols=75 Identities=21% Similarity=0.294 Sum_probs=58.3
Q ss_pred CEEEEECCccchHHHHHHHcC--CCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCeeE
Q 022298 157 GRWLDLYSGTGSVGIEAISRG--CSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDY 234 (299)
Q Consensus 157 ~~VLDLfaGSGalgIEAlSrG--a~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fDl 234 (299)
.+|+|||||+|.+++.+.+.| +..|+++|+|+.|+ +..+.|... ..++++|+.++.... +. ...+|+
T Consensus 3 ~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~-~~~~~N~~~------~~~~~~Di~~~~~~~--~~--~~~~D~ 71 (343)
T 1g55_A 3 LRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVAN-EVYKYNFPH------TQLLAKTIEGITLEE--FD--RLSFDM 71 (343)
T ss_dssp EEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHH-HHHHHHCTT------SCEECSCGGGCCHHH--HH--HHCCSE
T ss_pred CeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHH-HHHHHhccc------cccccCCHHHccHhH--cC--cCCcCE
Confidence 589999999999999999999 56899999999998 999999632 236778988765321 10 126999
Q ss_pred EEEcCCCC
Q 022298 235 MSVTPPYT 242 (299)
Q Consensus 235 I~iDPPY~ 242 (299)
|+.+||+.
T Consensus 72 l~~gpPCq 79 (343)
T 1g55_A 72 ILMSPPCQ 79 (343)
T ss_dssp EEECCC--
T ss_pred EEEcCCCc
Confidence 99999964
No 220
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=98.51 E-value=2.8e-07 Score=79.25 Aligned_cols=71 Identities=15% Similarity=0.183 Sum_probs=58.3
Q ss_pred CCCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCeeE
Q 022298 155 RPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDY 234 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fDl 234 (299)
.+.+|||+|||+|.++..++.+|+ +|+++|+++.++ +.+++|. + +.++.+|+.... ..+.||+
T Consensus 43 ~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~-~~a~~~~---~----~~~~~~d~~~~~--------~~~~fD~ 105 (211)
T 3e23_A 43 AGAKILELGCGAGYQAEAMLAAGF-DVDATDGSPELA-AEASRRL---G----RPVRTMLFHQLD--------AIDAYDA 105 (211)
T ss_dssp TTCEEEESSCTTSHHHHHHHHTTC-EEEEEESCHHHH-HHHHHHH---T----SCCEECCGGGCC--------CCSCEEE
T ss_pred CCCcEEEECCCCCHHHHHHHHcCC-eEEEECCCHHHH-HHHHHhc---C----CceEEeeeccCC--------CCCcEEE
Confidence 478999999999999999888876 799999999998 8999887 2 346778877642 2578999
Q ss_pred EEEcCCCC
Q 022298 235 MSVTPPYT 242 (299)
Q Consensus 235 I~iDPPY~ 242 (299)
|++.....
T Consensus 106 v~~~~~l~ 113 (211)
T 3e23_A 106 VWAHACLL 113 (211)
T ss_dssp EEECSCGG
T ss_pred EEecCchh
Confidence 99987554
No 221
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=98.51 E-value=3.2e-07 Score=80.13 Aligned_cols=75 Identities=11% Similarity=0.022 Sum_probs=60.8
Q ss_pred CCCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCeeE
Q 022298 155 RPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDY 234 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fDl 234 (299)
.+.+|||+|||+|.++..++.+|+ +|+++|+++.++ +.++++. . ..+++++++|+.+.. ...++||+
T Consensus 53 ~~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~-~~a~~~~---~-~~~~~~~~~d~~~~~-------~~~~~fD~ 119 (242)
T 3l8d_A 53 KEAEVLDVGCGDGYGTYKLSRTGY-KAVGVDISEVMI-QKGKERG---E-GPDLSFIKGDLSSLP-------FENEQFEA 119 (242)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHH-HHHHTTT---C-BTTEEEEECBTTBCS-------SCTTCEEE
T ss_pred CCCeEEEEcCCCCHHHHHHHHcCC-eEEEEECCHHHH-HHHHhhc---c-cCCceEEEcchhcCC-------CCCCCccE
Confidence 478999999999999999988877 799999999998 8888874 2 245889999987642 12478999
Q ss_pred EEEcCCCC
Q 022298 235 MSVTPPYT 242 (299)
Q Consensus 235 I~iDPPY~ 242 (299)
|++.-...
T Consensus 120 v~~~~~l~ 127 (242)
T 3l8d_A 120 IMAINSLE 127 (242)
T ss_dssp EEEESCTT
T ss_pred EEEcChHh
Confidence 99876554
No 222
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=98.51 E-value=2.3e-07 Score=84.18 Aligned_cols=77 Identities=10% Similarity=0.057 Sum_probs=63.1
Q ss_pred CCCEEEEECCccchHHHHHHHc-C-CCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCe
Q 022298 155 RPGRWLDLYSGTGSVGIEAISR-G-CSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPF 232 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSr-G-a~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~f 232 (299)
.+.+|||+|||+|.+++.++.+ + ..+|+++|+++.++ +.+++|+...+. +++++++|+.++. ..++|
T Consensus 22 ~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~-~~a~~~~~~~~~--~v~~~~~d~~~~~--------~~~~f 90 (284)
T 3gu3_A 22 KPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLL-AEARELFRLLPY--DSEFLEGDATEIE--------LNDKY 90 (284)
T ss_dssp SCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHH-HHHHHHHHSSSS--EEEEEESCTTTCC--------CSSCE
T ss_pred CCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHH-HHHHHHHHhcCC--ceEEEEcchhhcC--------cCCCe
Confidence 5789999999999999988776 2 35799999999998 999999987765 5889999988642 13689
Q ss_pred eEEEEcCCCC
Q 022298 233 DYMSVTPPYT 242 (299)
Q Consensus 233 DlI~iDPPY~ 242 (299)
|+|++.-...
T Consensus 91 D~v~~~~~l~ 100 (284)
T 3gu3_A 91 DIAICHAFLL 100 (284)
T ss_dssp EEEEEESCGG
T ss_pred eEEEECChhh
Confidence 9999977533
No 223
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=98.50 E-value=5e-08 Score=88.99 Aligned_cols=74 Identities=8% Similarity=-0.004 Sum_probs=61.3
Q ss_pred CCCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHh--CC-CCcEEEEEcchhhHHHHHhhhcCCCCC
Q 022298 155 RPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWT--GF-LDVSSIHTVRVETFLERAEQFVGKDGP 231 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~--g~-~~~~~vi~~D~~~~l~~~~~~~~~~~~ 231 (299)
.+.+|||+|||+|.++.+++..+ .+|++||+|+.++ +.+++|+... ++ ..+++++.+|+.+++ ++
T Consensus 72 ~~~~VL~iG~G~G~~~~~ll~~~-~~v~~veid~~~i-~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~----------~~ 139 (262)
T 2cmg_A 72 ELKEVLIVDGFDLELAHQLFKYD-THIDFVQADEKIL-DSFISFFPHFHEVKNNKNFTHAKQLLDLDI----------KK 139 (262)
T ss_dssp CCCEEEEESSCCHHHHHHHTTSS-CEEEEECSCHHHH-GGGTTTSTTHHHHHTCTTEEEESSGGGSCC----------CC
T ss_pred CCCEEEEEeCCcCHHHHHHHhCC-CEEEEEECCHHHH-HHHHHHHHhhccccCCCeEEEEechHHHHH----------hh
Confidence 46799999999999999998887 8999999999998 9999886432 22 246899999987753 57
Q ss_pred eeEEEEcCC
Q 022298 232 FDYMSVTPP 240 (299)
Q Consensus 232 fDlI~iDPP 240 (299)
||+|++|.+
T Consensus 140 fD~Ii~d~~ 148 (262)
T 2cmg_A 140 YDLIFCLQE 148 (262)
T ss_dssp EEEEEESSC
T ss_pred CCEEEECCC
Confidence 999999974
No 224
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=98.50 E-value=5.5e-07 Score=94.22 Aligned_cols=94 Identities=12% Similarity=0.080 Sum_probs=71.2
Q ss_pred CCCHHHHHHHHHHHHHhcCCCCCCCCCCEEEEECCccchHHHHHHHcCC--CEEEEEeCCHHHHHHHHHHHHHHh-----
Q 022298 130 RPMMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGC--SEVHFVEMDPWVVSNVLIPNLEWT----- 202 (299)
Q Consensus 130 RPttd~Vrealfn~L~~~~~~~~~~~~~~VLDLfaGSGalgIEAlSrGa--~~V~~VD~n~~Al~~~a~~N~~~~----- 202 (299)
.|......+.+.+.+.. ..+.+|||+|||+|.+++.++.+|. .+|++||+++.++ +.++++++..
T Consensus 703 PPL~eqRle~LLelL~~-------~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emL-e~AReRLa~~lnAkr 774 (950)
T 3htx_A 703 PPLSKQRVEYALKHIRE-------SSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGL-ARAAKMLHVKLNKEA 774 (950)
T ss_dssp SCHHHHHHHHHHHHHHH-------SCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHH-HHHHHHHHHHTTTTC
T ss_pred chHHHHHHHHHHHHhcc-------cCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHH-HHHHHHhhhccchhh
Confidence 34444555667777765 3578999999999999998888773 5899999999998 9999977643
Q ss_pred -CCCCcEEEEEcchhhHHHHHhhhcCCCCCeeEEEEcC
Q 022298 203 -GFLDVSSIHTVRVETFLERAEQFVGKDGPFDYMSVTP 239 (299)
Q Consensus 203 -g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fDlI~iDP 239 (299)
+. .+++++++|+.++. ...+.||+|++.-
T Consensus 775 ~gl-~nVefiqGDa~dLp-------~~d~sFDlVV~~e 804 (950)
T 3htx_A 775 CNV-KSATLYDGSILEFD-------SRLHDVDIGTCLE 804 (950)
T ss_dssp SSC-SEEEEEESCTTSCC-------TTSCSCCEEEEES
T ss_pred cCC-CceEEEECchHhCC-------cccCCeeEEEEeC
Confidence 33 35899999987642 1246899998743
No 225
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=98.49 E-value=5.7e-07 Score=82.54 Aligned_cols=85 Identities=16% Similarity=0.054 Sum_probs=62.7
Q ss_pred CCCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHhC------CCCcEEEEEcchhhHHHHHhhhcCC
Q 022298 155 RPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTG------FLDVSSIHTVRVETFLERAEQFVGK 228 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g------~~~~~~vi~~D~~~~l~~~~~~~~~ 228 (299)
.+.+|||+|||+|.++..++.++..+++++|+++.++ +.++++....+ ...+++++++|+.+.... ..+...
T Consensus 34 ~~~~VLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l-~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~-~~~~~~ 111 (313)
T 3bgv_A 34 RDITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSV-KQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLI-DKFRDP 111 (313)
T ss_dssp -CCEEEEETCTTTTTHHHHHHTTCSEEEEEESCHHHH-HHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCST-TTCSST
T ss_pred CCCEEEEECCCCcHHHHHHHhcCCCEEEEEeCCHHHH-HHHHHHHHHhhhcccccccceEEEEEecccccchh-hhcccC
Confidence 4679999999999999988877777899999999998 99999987652 223588999998764200 001111
Q ss_pred CCCeeEEEEcCCC
Q 022298 229 DGPFDYMSVTPPY 241 (299)
Q Consensus 229 ~~~fDlI~iDPPY 241 (299)
.++||+|++.-..
T Consensus 112 ~~~fD~V~~~~~l 124 (313)
T 3bgv_A 112 QMCFDICSCQFVC 124 (313)
T ss_dssp TCCEEEEEEETCG
T ss_pred CCCEEEEEEecch
Confidence 3489999986543
No 226
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=98.48 E-value=1.5e-07 Score=78.11 Aligned_cols=71 Identities=11% Similarity=0.199 Sum_probs=57.8
Q ss_pred CCCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCeeE
Q 022298 155 RPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDY 234 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fDl 234 (299)
++.+|||+|||+|.++..++.++. +|+++|+++.++ +.++++ . ++++++.+| ..+ ..+.||+
T Consensus 17 ~~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~-~~a~~~-----~-~~v~~~~~d-~~~---------~~~~~D~ 78 (170)
T 3i9f_A 17 KKGVIVDYGCGNGFYCKYLLEFAT-KLYCIDINVIAL-KEVKEK-----F-DSVITLSDP-KEI---------PDNSVDF 78 (170)
T ss_dssp CCEEEEEETCTTCTTHHHHHTTEE-EEEEECSCHHHH-HHHHHH-----C-TTSEEESSG-GGS---------CTTCEEE
T ss_pred CCCeEEEECCCCCHHHHHHHhhcC-eEEEEeCCHHHH-HHHHHh-----C-CCcEEEeCC-CCC---------CCCceEE
Confidence 567999999999999999888876 899999999998 888888 2 347788888 221 2468999
Q ss_pred EEEcCCCCC
Q 022298 235 MSVTPPYTA 243 (299)
Q Consensus 235 I~iDPPY~~ 243 (299)
|++.-.+..
T Consensus 79 v~~~~~l~~ 87 (170)
T 3i9f_A 79 ILFANSFHD 87 (170)
T ss_dssp EEEESCSTT
T ss_pred EEEccchhc
Confidence 999877654
No 227
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=98.48 E-value=6.7e-07 Score=80.43 Aligned_cols=101 Identities=14% Similarity=-0.004 Sum_probs=67.6
Q ss_pred CCCHHHHHHHHHHHHHhcCCCCCCCCCCEEEEECCccchHHHHHHHc-C-CCEEEEEeCCHHHHHHHHHHHHHHhCCCCc
Q 022298 130 RPMMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISR-G-CSEVHFVEMDPWVVSNVLIPNLEWTGFLDV 207 (299)
Q Consensus 130 RPttd~Vrealfn~L~~~~~~~~~~~~~~VLDLfaGSGalgIEAlSr-G-a~~V~~VD~n~~Al~~~a~~N~~~~g~~~~ 207 (299)
.|-..++...+.+.+.... ..++.+|||+|||||.++..++.. | ..+|+++|+++.++ +.+.+..+.. .+
T Consensus 55 ~~~~skla~~ll~~l~~~~----l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l-~~l~~~a~~r---~n 126 (232)
T 3id6_C 55 NAFRSKLAGAILKGLKTNP----IRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVV-RELLLVAQRR---PN 126 (232)
T ss_dssp CTTTCHHHHHHHTTCSCCS----CCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHH-HHHHHHHHHC---TT
T ss_pred chHHHHHHHHHHhhhhhcC----CCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHH-HHHHHHhhhc---CC
Confidence 3444455566655554211 135889999999999999887654 3 44899999999986 5555544432 24
Q ss_pred EEEEEcchhhHHHHHhhhcCCCCCeeEEEEcCCCC
Q 022298 208 SSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYT 242 (299)
Q Consensus 208 ~~vi~~D~~~~l~~~~~~~~~~~~fDlI~iDPPY~ 242 (299)
+.++.+|+...... ....++||+||+|-+..
T Consensus 127 v~~i~~Da~~~~~~----~~~~~~~D~I~~d~a~~ 157 (232)
T 3id6_C 127 IFPLLADARFPQSY----KSVVENVDVLYVDIAQP 157 (232)
T ss_dssp EEEEECCTTCGGGT----TTTCCCEEEEEECCCCT
T ss_pred eEEEEcccccchhh----hccccceEEEEecCCCh
Confidence 88899998753210 01136899999998763
No 228
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=98.46 E-value=2.1e-07 Score=84.54 Aligned_cols=88 Identities=17% Similarity=0.095 Sum_probs=63.0
Q ss_pred CCCCHHHHHHHHHHHHHhcCCCCCCCCCCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcE
Q 022298 129 VRPMMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVS 208 (299)
Q Consensus 129 ~RPttd~Vrealfn~L~~~~~~~~~~~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~ 208 (299)
.||+-. +.++++|.... -...+|||+|||+|.++..++.+|. +|++||+|+.++ +.++++ .++
T Consensus 21 ~Rp~yp---~~l~~~l~~~~-----~~~~~vLDvGcGtG~~~~~l~~~~~-~v~gvD~s~~ml-~~a~~~-------~~v 83 (257)
T 4hg2_A 21 FRPRYP---RALFRWLGEVA-----PARGDALDCGCGSGQASLGLAEFFE-RVHAVDPGEAQI-RQALRH-------PRV 83 (257)
T ss_dssp CCCCCC---HHHHHHHHHHS-----SCSSEEEEESCTTTTTHHHHHTTCS-EEEEEESCHHHH-HTCCCC-------TTE
T ss_pred HCCCcH---HHHHHHHHHhc-----CCCCCEEEEcCCCCHHHHHHHHhCC-EEEEEeCcHHhh-hhhhhc-------CCc
Confidence 476532 24555555431 1357999999999999998888875 799999999987 655432 348
Q ss_pred EEEEcchhhHHHHHhhhcCCCCCeeEEEEcCC
Q 022298 209 SIHTVRVETFLERAEQFVGKDGPFDYMSVTPP 240 (299)
Q Consensus 209 ~vi~~D~~~~l~~~~~~~~~~~~fDlI~iDPP 240 (299)
+++++|+++.- -..+.||+|++.=-
T Consensus 84 ~~~~~~~e~~~-------~~~~sfD~v~~~~~ 108 (257)
T 4hg2_A 84 TYAVAPAEDTG-------LPPASVDVAIAAQA 108 (257)
T ss_dssp EEEECCTTCCC-------CCSSCEEEEEECSC
T ss_pred eeehhhhhhhc-------ccCCcccEEEEeee
Confidence 89999987642 23578999998543
No 229
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.46 E-value=3e-07 Score=93.77 Aligned_cols=75 Identities=13% Similarity=0.135 Sum_probs=61.6
Q ss_pred CCCEEEEECCccchHHHH---HHHcCCC--EEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCC
Q 022298 155 RPGRWLDLYSGTGSVGIE---AISRGCS--EVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKD 229 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIE---AlSrGa~--~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~ 229 (299)
....|||+|||+|.++.. |..+++. +|++||.|+.| ..++++++.+++.++++++++|++++. ..
T Consensus 357 ~~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp~A--~~a~~~v~~N~~~dkVtVI~gd~eev~--------LP 426 (637)
T 4gqb_A 357 NVQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNPNA--VVTLENWQFEEWGSQVTVVSSDMREWV--------AP 426 (637)
T ss_dssp CEEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCHHH--HHHHHHHHHHTTGGGEEEEESCTTTCC--------CS
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCHHH--HHHHHHHHhccCCCeEEEEeCcceecc--------CC
Confidence 456899999999999544 4455544 68999999976 479999999999999999999999862 24
Q ss_pred CCeeEEEEcC
Q 022298 230 GPFDYMSVTP 239 (299)
Q Consensus 230 ~~fDlI~iDP 239 (299)
+++|+|+...
T Consensus 427 EKVDIIVSEw 436 (637)
T 4gqb_A 427 EKADIIVSEL 436 (637)
T ss_dssp SCEEEEECCC
T ss_pred cccCEEEEEc
Confidence 7899999876
No 230
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=98.46 E-value=3.7e-07 Score=79.02 Aligned_cols=78 Identities=14% Similarity=0.074 Sum_probs=57.2
Q ss_pred CCCEEEEECCccchHHHHHHHcC-CCEEEEEeCCHHHHHHHH----HHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCC
Q 022298 155 RPGRWLDLYSGTGSVGIEAISRG-CSEVHFVEMDPWVVSNVL----IPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKD 229 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSrG-a~~V~~VD~n~~Al~~~a----~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~ 229 (299)
.+.+|||+|||+|.+++.++.++ ..+|++||+++.++ +.+ +++.+..+.. +++++++|+.++. ...
T Consensus 27 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l-~~~~~~a~~~~~~~~~~-~v~~~~~d~~~l~-------~~~ 97 (218)
T 3mq2_A 27 YDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRM-EKISAKAAAKPAKGGLP-NLLYLWATAERLP-------PLS 97 (218)
T ss_dssp SSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGG-HHHHHHHTSCGGGTCCT-TEEEEECCSTTCC-------SCC
T ss_pred CCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHH-HHHHHHHHHhhhhcCCC-ceEEEecchhhCC-------CCC
Confidence 57899999999999999988874 45799999999976 543 3344445554 4899999987632 112
Q ss_pred CCeeEEEEcCCCC
Q 022298 230 GPFDYMSVTPPYT 242 (299)
Q Consensus 230 ~~fDlI~iDPPY~ 242 (299)
+. |.|++..|+.
T Consensus 98 ~~-d~v~~~~~~~ 109 (218)
T 3mq2_A 98 GV-GELHVLMPWG 109 (218)
T ss_dssp CE-EEEEEESCCH
T ss_pred CC-CEEEEEccch
Confidence 34 8888777654
No 231
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=98.46 E-value=6.7e-07 Score=85.05 Aligned_cols=87 Identities=18% Similarity=0.021 Sum_probs=65.5
Q ss_pred CCCEEEEECCccchHHHHHHHc--CCCEEEEEeCCHHHHHHHHHHHHHHh-----C-CC-CcEEEEEcchhhHHHHHhhh
Q 022298 155 RPGRWLDLYSGTGSVGIEAISR--GCSEVHFVEMDPWVVSNVLIPNLEWT-----G-FL-DVSSIHTVRVETFLERAEQF 225 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSr--Ga~~V~~VD~n~~Al~~~a~~N~~~~-----g-~~-~~~~vi~~D~~~~l~~~~~~ 225 (299)
++.+|||+|||+|.+++.++.+ ...+|+++|+++.++ +.+++|++.+ | .. .+++++++|+.+..... ..
T Consensus 83 ~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l-~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~-~~ 160 (383)
T 4fsd_A 83 EGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQL-EVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAE-PE 160 (383)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHH-HHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCB-SC
T ss_pred CCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHH-HHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcc-cC
Confidence 5789999999999999988765 234899999999998 9999999876 4 32 45899999988642100 00
Q ss_pred cCCCCCeeEEEEcCCCCC
Q 022298 226 VGKDGPFDYMSVTPPYTA 243 (299)
Q Consensus 226 ~~~~~~fDlI~iDPPY~~ 243 (299)
....++||+|+++..+..
T Consensus 161 ~~~~~~fD~V~~~~~l~~ 178 (383)
T 4fsd_A 161 GVPDSSVDIVISNCVCNL 178 (383)
T ss_dssp CCCTTCEEEEEEESCGGG
T ss_pred CCCCCCEEEEEEccchhc
Confidence 112468999999887653
No 232
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=98.45 E-value=3.6e-07 Score=87.61 Aligned_cols=79 Identities=25% Similarity=0.292 Sum_probs=61.2
Q ss_pred CEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHh-hhcCCCCCeeEE
Q 022298 157 GRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAE-QFVGKDGPFDYM 235 (299)
Q Consensus 157 ~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~-~~~~~~~~fDlI 235 (299)
-+++|||||+|.+++.+.+.|...|.++|+|+.|+ +..+.|.. + ..++++|+.++..... ........+|+|
T Consensus 3 ~~vidLFsG~GGlslG~~~aG~~~v~avE~d~~a~-~t~~~N~~-----~-~~~~~~DI~~~~~~~~~~~~~~~~~~D~i 75 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAGFDVKMAVEIDQHAI-NTHAINFP-----R-SLHVQEDVSLLNAEIIKGFFKNDMPIDGI 75 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHTCEEEEEECSCHHHH-HHHHHHCT-----T-SEEECCCGGGCCHHHHHHHHCSCCCCCEE
T ss_pred CeEEEEccCcCHHHHHHHHCCCcEEEEEeCCHHHH-HHHHHhCC-----C-CceEecChhhcCHHHHHhhcccCCCeeEE
Confidence 47999999999999999899998899999999997 99998852 2 4577889887643210 001123579999
Q ss_pred EEcCCCC
Q 022298 236 SVTPPYT 242 (299)
Q Consensus 236 ~iDPPY~ 242 (299)
+.+||+.
T Consensus 76 ~ggpPCQ 82 (376)
T 3g7u_A 76 IGGPPCQ 82 (376)
T ss_dssp EECCCCC
T ss_pred EecCCCC
Confidence 9999965
No 233
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=98.43 E-value=2e-07 Score=82.59 Aligned_cols=80 Identities=13% Similarity=0.027 Sum_probs=61.1
Q ss_pred CCCEEEEECCccchHHHHHHHc-CCCEEEEEeCC-HHHHHHHH---HHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCC
Q 022298 155 RPGRWLDLYSGTGSVGIEAISR-GCSEVHFVEMD-PWVVSNVL---IPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKD 229 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSr-Ga~~V~~VD~n-~~Al~~~a---~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~ 229 (299)
.+.+|||+|||+|.+++.++.+ ...+|++||++ +..+ +.+ ++|++..++.+ ++++++|+.++... ..
T Consensus 24 ~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml-~~A~~A~~~~~~~~~~~-v~~~~~d~~~l~~~------~~ 95 (225)
T 3p2e_A 24 FDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLF-DISKKIIKKPSKGGLSN-VVFVIAAAESLPFE------LK 95 (225)
T ss_dssp CSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGH-HHHHHHTSCGGGTCCSS-EEEECCBTTBCCGG------GT
T ss_pred CCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHH-HHHHHHHHHHHHcCCCC-eEEEEcCHHHhhhh------cc
Confidence 5779999999999999987743 33479999999 6554 666 78887778754 88999998775211 12
Q ss_pred CCeeEEEEcCCCC
Q 022298 230 GPFDYMSVTPPYT 242 (299)
Q Consensus 230 ~~fDlI~iDPPY~ 242 (299)
..+|.|++++|+.
T Consensus 96 d~v~~i~~~~~~~ 108 (225)
T 3p2e_A 96 NIADSISILFPWG 108 (225)
T ss_dssp TCEEEEEEESCCH
T ss_pred CeEEEEEEeCCCc
Confidence 6789999998864
No 234
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=98.41 E-value=1.6e-07 Score=83.86 Aligned_cols=74 Identities=11% Similarity=0.053 Sum_probs=56.3
Q ss_pred CCCEEEEECCccchHHHHHHHc-----CCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhH--HHHHhhhcC
Q 022298 155 RPGRWLDLYSGTGSVGIEAISR-----GCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETF--LERAEQFVG 227 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSr-----Ga~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~--l~~~~~~~~ 227 (299)
.+.+|||+|||+|..++.++.+ ...+|++||+++.++ +.++ + . .++++++++|+.+. +...
T Consensus 81 ~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l-~~a~-~---~--~~~v~~~~gD~~~~~~l~~~----- 148 (236)
T 2bm8_A 81 RPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRC-QIPA-S---D--MENITLHQGDCSDLTTFEHL----- 148 (236)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTC-CCCG-G---G--CTTEEEEECCSSCSGGGGGG-----
T ss_pred CCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHH-HHHh-c---c--CCceEEEECcchhHHHHHhh-----
Confidence 3579999999999999987775 245799999999987 7776 2 2 34689999998764 2211
Q ss_pred CCCCeeEEEEcCC
Q 022298 228 KDGPFDYMSVTPP 240 (299)
Q Consensus 228 ~~~~fDlI~iDPP 240 (299)
...+||+|++|-.
T Consensus 149 ~~~~fD~I~~d~~ 161 (236)
T 2bm8_A 149 REMAHPLIFIDNA 161 (236)
T ss_dssp SSSCSSEEEEESS
T ss_pred ccCCCCEEEECCc
Confidence 1237999999986
No 235
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=98.41 E-value=4.7e-07 Score=79.83 Aligned_cols=72 Identities=13% Similarity=0.074 Sum_probs=58.4
Q ss_pred CCCEEEEECCccchHHHHHHHc--CCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCe
Q 022298 155 RPGRWLDLYSGTGSVGIEAISR--GCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPF 232 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSr--Ga~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~f 232 (299)
.+.+|||+|||+|.++..++.+ ++ +|+++|+++.++ +.++++ . .+++++.+|+.++. ..+.|
T Consensus 33 ~~~~vLdiG~G~G~~~~~l~~~~~~~-~v~~~D~s~~~~-~~a~~~-----~-~~~~~~~~d~~~~~--------~~~~f 96 (259)
T 2p35_A 33 RVLNGYDLGCGPGNSTELLTDRYGVN-VITGIDSDDDML-EKAADR-----L-PNTNFGKADLATWK--------PAQKA 96 (259)
T ss_dssp CCSSEEEETCTTTHHHHHHHHHHCTT-SEEEEESCHHHH-HHHHHH-----S-TTSEEEECCTTTCC--------CSSCE
T ss_pred CCCEEEEecCcCCHHHHHHHHhCCCC-EEEEEECCHHHH-HHHHHh-----C-CCcEEEECChhhcC--------ccCCc
Confidence 5689999999999999998877 55 699999999998 888887 1 24788999987642 24689
Q ss_pred eEEEEcCCCC
Q 022298 233 DYMSVTPPYT 242 (299)
Q Consensus 233 DlI~iDPPY~ 242 (299)
|+|++.....
T Consensus 97 D~v~~~~~l~ 106 (259)
T 2p35_A 97 DLLYANAVFQ 106 (259)
T ss_dssp EEEEEESCGG
T ss_pred CEEEEeCchh
Confidence 9999977544
No 236
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=98.40 E-value=6.7e-07 Score=82.88 Aligned_cols=82 Identities=9% Similarity=-0.092 Sum_probs=55.3
Q ss_pred CCCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCC-----cEEEEEcchhhH--HHHHhhhcC
Q 022298 155 RPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLD-----VSSIHTVRVETF--LERAEQFVG 227 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~-----~~~vi~~D~~~~--l~~~~~~~~ 227 (299)
.+.+|||+|||+|......+..|..+|+++|+++.++ +.+++.....+... .+++.+.|+..- ...+.. ..
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~~~~~v~GiD~S~~~l-~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~-~~ 125 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYGEIALLVATDPDADAI-ARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVRE-VF 125 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHTTCSEEEEEESCHHHH-HHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHT-TC
T ss_pred CCCeEEEEecCCcHhHHHHHhcCCCeEEEEECCHHHH-HHHHHHHHhccccccccccccchhhhhcccchhhhhhhc-cc
Confidence 3689999999999766666666666899999999998 99999887665421 145667776210 011100 01
Q ss_pred CCCCeeEEEEc
Q 022298 228 KDGPFDYMSVT 238 (299)
Q Consensus 228 ~~~~fDlI~iD 238 (299)
..++||+|++-
T Consensus 126 ~~~~FD~V~~~ 136 (302)
T 2vdw_A 126 YFGKFNIIDWQ 136 (302)
T ss_dssp CSSCEEEEEEE
T ss_pred cCCCeeEEEEC
Confidence 24689999863
No 237
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=98.40 E-value=1.1e-06 Score=76.26 Aligned_cols=67 Identities=15% Similarity=0.109 Sum_probs=55.2
Q ss_pred CCCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCeeE
Q 022298 155 RPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDY 234 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fDl 234 (299)
.+.+|||+|||+|.++..++.++. +|+++|+++.++ +.++++. .+++++++|+.++. ..+.||+
T Consensus 40 ~~~~vLdiG~G~G~~~~~l~~~~~-~v~~~D~s~~~~-~~a~~~~------~~~~~~~~d~~~~~--------~~~~~D~ 103 (239)
T 3bxo_A 40 EASSLLDVACGTGTHLEHFTKEFG-DTAGLELSEDML-THARKRL------PDATLHQGDMRDFR--------LGRKFSA 103 (239)
T ss_dssp TCCEEEEETCTTSHHHHHHHHHHS-EEEEEESCHHHH-HHHHHHC------TTCEEEECCTTTCC--------CSSCEEE
T ss_pred CCCeEEEecccCCHHHHHHHHhCC-cEEEEeCCHHHH-HHHHHhC------CCCEEEECCHHHcc--------cCCCCcE
Confidence 478999999999999999888876 799999999998 8888874 23678899987642 1468999
Q ss_pred EEE
Q 022298 235 MSV 237 (299)
Q Consensus 235 I~i 237 (299)
|++
T Consensus 104 v~~ 106 (239)
T 3bxo_A 104 VVS 106 (239)
T ss_dssp EEE
T ss_pred EEE
Confidence 994
No 238
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=98.39 E-value=7e-08 Score=86.86 Aligned_cols=48 Identities=15% Similarity=0.119 Sum_probs=42.2
Q ss_pred CCCCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHh
Q 022298 154 LRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWT 202 (299)
Q Consensus 154 ~~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~ 202 (299)
..+.+|||+|||+|.+.+.++..|+.+|+++|+++.++ +.++++++..
T Consensus 54 ~~g~~vLDiGCG~G~~~~~~~~~~~~~v~g~D~s~~~l-~~a~~~~~~~ 101 (263)
T 2a14_A 54 LQGDTLIDIGSGPTIYQVLAACDSFQDITLSDFTDRNR-EELEKWLKKE 101 (263)
T ss_dssp CCEEEEEESSCTTCCGGGTTGGGTEEEEEEEESCHHHH-HHHHHHHHTC
T ss_pred CCCceEEEeCCCccHHHHHHHHhhhcceeeccccHHHH-HHHHHHHhcC
Confidence 46789999999999988877788988899999999998 9999987653
No 239
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=98.39 E-value=5.6e-07 Score=79.12 Aligned_cols=81 Identities=7% Similarity=-0.103 Sum_probs=61.2
Q ss_pred CCCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCeeE
Q 022298 155 RPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDY 234 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fDl 234 (299)
.+.+|||+|||+|.++..++.+|. +|+++|+|+.++ +.+++|. .. .+++++++|+.+...... + .....||+
T Consensus 56 ~~~~vLD~GcG~G~~~~~la~~~~-~v~gvD~s~~~~-~~a~~~~---~~-~~~~~~~~d~~~~~~~~~-~-~~~~~~d~ 127 (245)
T 3ggd_A 56 PELPLIDFACGNGTQTKFLSQFFP-RVIGLDVSKSAL-EIAAKEN---TA-ANISYRLLDGLVPEQAAQ-I-HSEIGDAN 127 (245)
T ss_dssp TTSCEEEETCTTSHHHHHHHHHSS-CEEEEESCHHHH-HHHHHHS---CC-TTEEEEECCTTCHHHHHH-H-HHHHCSCE
T ss_pred CCCeEEEEcCCCCHHHHHHHHhCC-CEEEEECCHHHH-HHHHHhC---cc-cCceEEECcccccccccc-c-ccccCccE
Confidence 568999999999999999988887 699999999998 8998876 22 358899999877532210 0 00125899
Q ss_pred EEEcCCCCC
Q 022298 235 MSVTPPYTA 243 (299)
Q Consensus 235 I~iDPPY~~ 243 (299)
|+++--...
T Consensus 128 v~~~~~~~~ 136 (245)
T 3ggd_A 128 IYMRTGFHH 136 (245)
T ss_dssp EEEESSSTT
T ss_pred EEEcchhhc
Confidence 998865443
No 240
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=98.38 E-value=1.2e-06 Score=80.79 Aligned_cols=48 Identities=23% Similarity=0.162 Sum_probs=43.7
Q ss_pred CCCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCC
Q 022298 155 RPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGF 204 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~ 204 (299)
++..|||+|||||+++++|+..|. ++++||+++.++ +.+++|++...-
T Consensus 235 ~~~~vlD~f~GsGt~~~~a~~~g~-~~~g~e~~~~~~-~~a~~r~~~~~~ 282 (297)
T 2zig_A 235 VGDVVLDPFAGTGTTLIAAARWGR-RALGVELVPRYA-QLAKERFAREVP 282 (297)
T ss_dssp TTCEEEETTCTTTHHHHHHHHTTC-EEEEEESCHHHH-HHHHHHHHHHST
T ss_pred CCCEEEECCCCCCHHHHHHHHcCC-eEEEEeCCHHHH-HHHHHHHHHhcc
Confidence 578999999999999999999986 799999999998 999999987643
No 241
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=98.37 E-value=8e-07 Score=79.99 Aligned_cols=72 Identities=19% Similarity=0.158 Sum_probs=58.0
Q ss_pred CCCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCeeE
Q 022298 155 RPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDY 234 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fDl 234 (299)
.+.+|||+|||+|.++..++..|+ +|+++|+++.++ +.++++. .+++++.+|+.++. ..+.||+
T Consensus 57 ~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~-~~a~~~~------~~~~~~~~d~~~~~--------~~~~fD~ 120 (279)
T 3ccf_A 57 PGEFILDLGCGTGQLTEKIAQSGA-EVLGTDNAATMI-EKARQNY------PHLHFDVADARNFR--------VDKPLDA 120 (279)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHH-HHHHHHC------TTSCEEECCTTTCC--------CSSCEEE
T ss_pred CCCEEEEecCCCCHHHHHHHhCCC-eEEEEECCHHHH-HHHHhhC------CCCEEEECChhhCC--------cCCCcCE
Confidence 578999999999999998888765 799999999998 8888775 23668889987642 1368999
Q ss_pred EEEcCCCC
Q 022298 235 MSVTPPYT 242 (299)
Q Consensus 235 I~iDPPY~ 242 (299)
|++.-...
T Consensus 121 v~~~~~l~ 128 (279)
T 3ccf_A 121 VFSNAMLH 128 (279)
T ss_dssp EEEESCGG
T ss_pred EEEcchhh
Confidence 99876543
No 242
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=98.37 E-value=6.8e-07 Score=77.25 Aligned_cols=75 Identities=5% Similarity=-0.073 Sum_probs=52.8
Q ss_pred CCCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHH--HHhhhcC--CCC
Q 022298 155 RPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLE--RAEQFVG--KDG 230 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~--~~~~~~~--~~~ 230 (299)
++.+|||||||+|.++..++.++ .+|++||+++.+. . .+++++++|+.+... ....... ..+
T Consensus 25 ~g~~VLDlG~G~G~~s~~la~~~-~~V~gvD~~~~~~------------~-~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (191)
T 3dou_A 25 KGDAVIEIGSSPGGWTQVLNSLA-RKIISIDLQEMEE------------I-AGVRFIRCDIFKETIFDDIDRALREEGIE 90 (191)
T ss_dssp TTCEEEEESCTTCHHHHHHTTTC-SEEEEEESSCCCC------------C-TTCEEEECCTTSSSHHHHHHHHHHHHTCS
T ss_pred CCCEEEEEeecCCHHHHHHHHcC-CcEEEEecccccc------------C-CCeEEEEccccCHHHHHHHHHHhhcccCC
Confidence 57899999999999999888884 4799999998531 1 247889999865321 0000000 013
Q ss_pred CeeEEEEcCCCCC
Q 022298 231 PFDYMSVTPPYTA 243 (299)
Q Consensus 231 ~fDlI~iDPPY~~ 243 (299)
+||+|++|+|...
T Consensus 91 ~~D~Vlsd~~~~~ 103 (191)
T 3dou_A 91 KVDDVVSDAMAKV 103 (191)
T ss_dssp SEEEEEECCCCCC
T ss_pred cceEEecCCCcCC
Confidence 8999999997654
No 243
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=98.36 E-value=1.3e-06 Score=81.82 Aligned_cols=76 Identities=14% Similarity=0.027 Sum_probs=63.5
Q ss_pred CCCEEEEECCccchHHHHHHHcC-CCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCee
Q 022298 155 RPGRWLDLYSGTGSVGIEAISRG-CSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFD 233 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSrG-a~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fD 233 (299)
.+.+|||+|||+|.+++.++.+. ..+++++|+ +.++ +.+++|+...++.++++++.+|+.+.+ ...||
T Consensus 182 ~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~-~~a~~~~~~~~~~~~v~~~~~d~~~~~---------~~~~D 250 (374)
T 1qzz_A 182 AVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPA-ERARRRFADAGLADRVTVAEGDFFKPL---------PVTAD 250 (374)
T ss_dssp TCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHH-HHHHHHHHHTTCTTTEEEEECCTTSCC---------SCCEE
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHH-HHHHHHHHhcCCCCceEEEeCCCCCcC---------CCCCC
Confidence 46899999999999999988764 347999999 9998 999999999988778999999987532 13499
Q ss_pred EEEEcCCC
Q 022298 234 YMSVTPPY 241 (299)
Q Consensus 234 lI~iDPPY 241 (299)
+|++.-..
T Consensus 251 ~v~~~~vl 258 (374)
T 1qzz_A 251 VVLLSFVL 258 (374)
T ss_dssp EEEEESCG
T ss_pred EEEEeccc
Confidence 99987654
No 244
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=98.36 E-value=1.9e-07 Score=82.55 Aligned_cols=82 Identities=12% Similarity=-0.031 Sum_probs=60.6
Q ss_pred CCCCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCC----------------------------C
Q 022298 154 LRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGF----------------------------L 205 (299)
Q Consensus 154 ~~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~----------------------------~ 205 (299)
..+.+|||+|||+|.+++.++.+|..+|+++|+++.++ +.+++++...+. .
T Consensus 55 ~~~~~vLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l-~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 133 (265)
T 2i62_A 55 VKGELLIDIGSGPTIYQLLSACESFTEIIVSDYTDQNL-WELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLR 133 (265)
T ss_dssp CCEEEEEEESCTTCCGGGTTGGGTEEEEEEEESCHHHH-HHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHH
T ss_pred cCCCEEEEECCCccHHHHHHhhcccCeEEEecCCHHHH-HHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhh
Confidence 45789999999999999988888876899999999998 999988765421 0
Q ss_pred CcE-EEEEcchhhHHHHHhhhcCCCCCeeEEEEcC
Q 022298 206 DVS-SIHTVRVETFLERAEQFVGKDGPFDYMSVTP 239 (299)
Q Consensus 206 ~~~-~vi~~D~~~~l~~~~~~~~~~~~fDlI~iDP 239 (299)
+++ +++++|+.+..... ....+.||+|++.-
T Consensus 134 ~~v~~~~~~d~~~~~~~~---~~~~~~fD~v~~~~ 165 (265)
T 2i62_A 134 RAIKQVLKCDVTQSQPLG---GVSLPPADCLLSTL 165 (265)
T ss_dssp HHEEEEEECCTTSSSTTT---TCCCCCEEEEEEES
T ss_pred hhheeEEEeeeccCCCCC---ccccCCccEEEEhh
Confidence 126 78899987642100 00126899999853
No 245
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=98.35 E-value=3.2e-07 Score=84.54 Aligned_cols=73 Identities=15% Similarity=0.104 Sum_probs=59.4
Q ss_pred CCCEEEEECCccchHHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCee
Q 022298 155 RPGRWLDLYSGTGSVGIEAISR-GCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFD 233 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSr-Ga~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fD 233 (299)
...+|||||||+|-+++..+.. +..+++++|+|+.++ +.+++|+..+|.. .++...|...-. ..+.||
T Consensus 132 ~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~l-e~a~~~l~~~g~~--~~~~v~D~~~~~--------p~~~~D 200 (281)
T 3lcv_B 132 RPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLV-GFVDEALTRLNVP--HRTNVADLLEDR--------LDEPAD 200 (281)
T ss_dssp CCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHH-HHHHHHHHHTTCC--EEEEECCTTTSC--------CCSCCS
T ss_pred CCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHH-HHHHHHHHhcCCC--ceEEEeeecccC--------CCCCcc
Confidence 3679999999999999987665 677999999999998 9999999999985 567777755321 246789
Q ss_pred EEEEc
Q 022298 234 YMSVT 238 (299)
Q Consensus 234 lI~iD 238 (299)
++++.
T Consensus 201 vaL~l 205 (281)
T 3lcv_B 201 VTLLL 205 (281)
T ss_dssp EEEET
T ss_pred hHHHH
Confidence 88764
No 246
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=98.35 E-value=8.1e-07 Score=80.39 Aligned_cols=61 Identities=18% Similarity=0.059 Sum_probs=48.2
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCC
Q 022298 134 EVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGF 204 (299)
Q Consensus 134 d~Vrealfn~L~~~~~~~~~~~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~ 204 (299)
..+.+.+..... .++..|||+|||||+.+++|+..|. +++++|+++.++ +.+++|++.+++
T Consensus 199 ~~l~~~~i~~~~--------~~~~~vlD~f~GsGtt~~~a~~~gr-~~ig~e~~~~~~-~~~~~r~~~~~~ 259 (260)
T 1g60_A 199 RDLIERIIRASS--------NPNDLVLDCFMGSGTTAIVAKKLGR-NFIGCDMNAEYV-NQANFVLNQLEI 259 (260)
T ss_dssp HHHHHHHHHHHC--------CTTCEEEESSCTTCHHHHHHHHTTC-EEEEEESCHHHH-HHHHHHHHC---
T ss_pred HHHHHHHHHHhC--------CCCCEEEECCCCCCHHHHHHHHcCC-eEEEEeCCHHHH-HHHHHHHHhccC
Confidence 445555555543 3578999999999999999999986 799999999998 999999987654
No 247
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=98.34 E-value=6.7e-07 Score=76.68 Aligned_cols=71 Identities=14% Similarity=-0.026 Sum_probs=56.0
Q ss_pred CCCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCeeE
Q 022298 155 RPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDY 234 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fDl 234 (299)
.+.+|||+|||+|.++..+ |..+++++|+++.++ +.+++|. .+++++++|+.+.. ...++||+
T Consensus 36 ~~~~vLdiG~G~G~~~~~l---~~~~v~~vD~s~~~~-~~a~~~~------~~~~~~~~d~~~~~-------~~~~~fD~ 98 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL---PYPQKVGVEPSEAML-AVGRRRA------PEATWVRAWGEALP-------FPGESFDV 98 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC---CCSEEEEECCCHHHH-HHHHHHC------TTSEEECCCTTSCC-------SCSSCEEE
T ss_pred CCCeEEEECCCCCHhHHhC---CCCeEEEEeCCHHHH-HHHHHhC------CCcEEEEcccccCC-------CCCCcEEE
Confidence 5789999999999999866 665899999999998 8888876 23678888876531 12468999
Q ss_pred EEEcCCCC
Q 022298 235 MSVTPPYT 242 (299)
Q Consensus 235 I~iDPPY~ 242 (299)
|++.-...
T Consensus 99 v~~~~~l~ 106 (211)
T 2gs9_A 99 VLLFTTLE 106 (211)
T ss_dssp EEEESCTT
T ss_pred EEEcChhh
Confidence 99876543
No 248
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=98.34 E-value=1.1e-06 Score=79.95 Aligned_cols=71 Identities=15% Similarity=0.108 Sum_probs=57.8
Q ss_pred CCCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCeeE
Q 022298 155 RPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDY 234 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fDl 234 (299)
...+|||+|||+|.+++... ++.+++++|+|+.++ +.+++|+..++.. ..+..+|..... ..+.||+
T Consensus 105 ~p~~VLDlGCG~gpLal~~~--~~~~y~a~DId~~~i-~~ar~~~~~~g~~--~~~~v~D~~~~~--------~~~~~Dv 171 (253)
T 3frh_A 105 TPRRVLDIACGLNPLALYER--GIASVWGCDIHQGLG-DVITPFAREKDWD--FTFALQDVLCAP--------PAEAGDL 171 (253)
T ss_dssp CCSEEEEETCTTTHHHHHHT--TCSEEEEEESBHHHH-HHHHHHHHHTTCE--EEEEECCTTTSC--------CCCBCSE
T ss_pred CCCeEEEecCCccHHHHHhc--cCCeEEEEeCCHHHH-HHHHHHHHhcCCC--ceEEEeecccCC--------CCCCcch
Confidence 47799999999999999765 777899999999998 9999999998853 667778865431 2468898
Q ss_pred EEEc
Q 022298 235 MSVT 238 (299)
Q Consensus 235 I~iD 238 (299)
|++.
T Consensus 172 vLll 175 (253)
T 3frh_A 172 ALIF 175 (253)
T ss_dssp EEEE
T ss_pred HHHH
Confidence 8765
No 249
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=98.30 E-value=1.8e-06 Score=80.63 Aligned_cols=76 Identities=17% Similarity=0.102 Sum_probs=63.0
Q ss_pred CCCEEEEECCccchHHHHHHHcC-CCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCee
Q 022298 155 RPGRWLDLYSGTGSVGIEAISRG-CSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFD 233 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSrG-a~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fD 233 (299)
.+.+|||+|||+|.+++.++.++ ..+++++|+ +.++ +.+++|++..++.++++++.+|+.+.+ ...||
T Consensus 183 ~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~-~~a~~~~~~~~~~~~v~~~~~d~~~~~---------~~~~D 251 (360)
T 1tw3_A 183 NVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTV-DTARSYLKDEGLSDRVDVVEGDFFEPL---------PRKAD 251 (360)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHH-HHHHHHHHHTTCTTTEEEEECCTTSCC---------SSCEE
T ss_pred cCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHH-HHHHHHHHhcCCCCceEEEeCCCCCCC---------CCCcc
Confidence 46799999999999999888764 347999999 8888 999999999988778999999987532 13499
Q ss_pred EEEEcCCC
Q 022298 234 YMSVTPPY 241 (299)
Q Consensus 234 lI~iDPPY 241 (299)
+|++.-..
T Consensus 252 ~v~~~~vl 259 (360)
T 1tw3_A 252 AIILSFVL 259 (360)
T ss_dssp EEEEESCG
T ss_pred EEEEcccc
Confidence 99986654
No 250
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=98.28 E-value=1.4e-06 Score=73.45 Aligned_cols=87 Identities=10% Similarity=-0.010 Sum_probs=64.3
Q ss_pred CCCCHHHHHHHHHHHHHhcCCCCCCCCCCEEEEECCccc-hHHHHHHH-cCCCEEEEEeCCHHHHHHHHHHHHHHhCCCC
Q 022298 129 VRPMMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTG-SVGIEAIS-RGCSEVHFVEMDPWVVSNVLIPNLEWTGFLD 206 (299)
Q Consensus 129 ~RPttd~Vrealfn~L~~~~~~~~~~~~~~VLDLfaGSG-algIEAlS-rGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~ 206 (299)
.-|....+-+.+...+.... ..+.+|||+|||+| -++..++. +|. .|+++|+|+.|+ +
T Consensus 14 ~~~~~~~m~e~LaeYI~~~~-----~~~~rVlEVG~G~g~~vA~~La~~~g~-~V~atDInp~Av-~------------- 73 (153)
T 2k4m_A 14 LVPRGSHMWNDLAVYIIRCS-----GPGTRVVEVGAGRFLYVSDYIRKHSKV-DLVLTDIKPSHG-G------------- 73 (153)
T ss_dssp CCCCCCHHHHHHHHHHHHHS-----CSSSEEEEETCTTCCHHHHHHHHHSCC-EEEEECSSCSST-T-------------
T ss_pred cccchhhHHHHHHHHHHhcC-----CCCCcEEEEccCCChHHHHHHHHhCCC-eEEEEECCcccc-c-------------
Confidence 34444455777878776541 24679999999999 59987776 887 599999999997 4
Q ss_pred cEEEEEcchhhHHHHHhhhcCCCCCeeEE-EEcCCCCCC
Q 022298 207 VSSIHTVRVETFLERAEQFVGKDGPFDYM-SVTPPYTAV 244 (299)
Q Consensus 207 ~~~vi~~D~~~~l~~~~~~~~~~~~fDlI-~iDPPY~~~ 244 (299)
+++.|+++..... -+.||+| -++||....
T Consensus 74 ---~v~dDiF~P~~~~------Y~~~DLIYsirPP~El~ 103 (153)
T 2k4m_A 74 ---IVRDDITSPRMEI------YRGAALIYSIRPPAEIH 103 (153)
T ss_dssp ---EECCCSSSCCHHH------HTTEEEEEEESCCTTTH
T ss_pred ---eEEccCCCCcccc------cCCcCEEEEcCCCHHHH
Confidence 6778877644322 1489999 699999863
No 251
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.25 E-value=2.2e-06 Score=76.42 Aligned_cols=70 Identities=24% Similarity=0.250 Sum_probs=55.1
Q ss_pred CCCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCeeE
Q 022298 155 RPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDY 234 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fDl 234 (299)
.+.+|||+|||+|.++..++.+|+ +|+++|+++.++ +.++++.. +. ++++|+.++. ...+.||+
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~l-~~a~~~~~-----~~--~~~~d~~~~~-------~~~~~fD~ 117 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQERGF-EVVLVDPSKEML-EVAREKGV-----KN--VVEAKAEDLP-------FPSGAFEA 117 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHHTTTC-EEEEEESCHHHH-HHHHHHTC-----SC--EEECCTTSCC-------SCTTCEEE
T ss_pred CCCeEEEeCCCcCHHHHHHHHcCC-eEEEEeCCHHHH-HHHHhhcC-----CC--EEECcHHHCC-------CCCCCEEE
Confidence 478999999999999999888876 799999999998 88888753 11 6778876531 12468999
Q ss_pred EEEcCC
Q 022298 235 MSVTPP 240 (299)
Q Consensus 235 I~iDPP 240 (299)
|++...
T Consensus 118 v~~~~~ 123 (260)
T 2avn_A 118 VLALGD 123 (260)
T ss_dssp EEECSS
T ss_pred EEEcch
Confidence 998643
No 252
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=98.24 E-value=3.4e-06 Score=77.63 Aligned_cols=74 Identities=18% Similarity=0.158 Sum_probs=61.3
Q ss_pred CCCEEEEECCccchHHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCee
Q 022298 155 RPGRWLDLYSGTGSVGIEAISR-GCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFD 233 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSr-Ga~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fD 233 (299)
.+.+|||+|||+|.++..++.+ ...+++++|++ .++ +.+++|+...++.++++++.+|+.+.. ..+.||
T Consensus 165 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~-~~a~~~~~~~~~~~~v~~~~~d~~~~~--------~~~~~D 234 (335)
T 2r3s_A 165 EPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVL-EVAKENARIQGVASRYHTIAGSAFEVD--------YGNDYD 234 (335)
T ss_dssp CCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHH-HHHHHHHHHHTCGGGEEEEESCTTTSC--------CCSCEE
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHH-HHHHHHHHhcCCCcceEEEecccccCC--------CCCCCc
Confidence 4679999999999999988876 23479999999 888 999999999988778999999987531 123599
Q ss_pred EEEEc
Q 022298 234 YMSVT 238 (299)
Q Consensus 234 lI~iD 238 (299)
+|++.
T Consensus 235 ~v~~~ 239 (335)
T 2r3s_A 235 LVLLP 239 (335)
T ss_dssp EEEEE
T ss_pred EEEEc
Confidence 99983
No 253
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=98.21 E-value=1e-06 Score=75.61 Aligned_cols=72 Identities=18% Similarity=0.162 Sum_probs=55.2
Q ss_pred CCCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCeeE
Q 022298 155 RPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDY 234 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fDl 234 (299)
.+.+|||+|||+|.++..++.+| .+++++|+++.++ +.+++|.. +++.+|+.++.. ....++||+
T Consensus 32 ~~~~vLdiG~G~G~~~~~l~~~~-~~~~~~D~~~~~~-~~~~~~~~--------~~~~~d~~~~~~-----~~~~~~fD~ 96 (230)
T 3cc8_A 32 EWKEVLDIGCSSGALGAAIKENG-TRVSGIEAFPEAA-EQAKEKLD--------HVVLGDIETMDM-----PYEEEQFDC 96 (230)
T ss_dssp TCSEEEEETCTTSHHHHHHHTTT-CEEEEEESSHHHH-HHHHTTSS--------EEEESCTTTCCC-----CSCTTCEEE
T ss_pred CCCcEEEeCCCCCHHHHHHHhcC-CeEEEEeCCHHHH-HHHHHhCC--------cEEEcchhhcCC-----CCCCCccCE
Confidence 57899999999999999988887 5899999999998 88877641 467888765311 112468999
Q ss_pred EEEcCCC
Q 022298 235 MSVTPPY 241 (299)
Q Consensus 235 I~iDPPY 241 (299)
|++.-..
T Consensus 97 v~~~~~l 103 (230)
T 3cc8_A 97 VIFGDVL 103 (230)
T ss_dssp EEEESCG
T ss_pred EEECChh
Confidence 9986543
No 254
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=98.19 E-value=2.9e-07 Score=82.30 Aligned_cols=45 Identities=18% Similarity=0.121 Sum_probs=39.8
Q ss_pred CCCCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHH
Q 022298 154 LRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNL 199 (299)
Q Consensus 154 ~~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~ 199 (299)
..+.+|||+|||||.++..++.+|+.+|++||+++.++ +.+++|.
T Consensus 36 ~~g~~VLDiGcGtG~~t~~la~~g~~~V~gvDis~~ml-~~a~~~~ 80 (232)
T 3opn_A 36 INGKTCLDIGSSTGGFTDVMLQNGAKLVYALDVGTNQL-AWKIRSD 80 (232)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSCCCC-CHHHHTC
T ss_pred CCCCEEEEEccCCCHHHHHHHhcCCCEEEEEcCCHHHH-HHHHHhC
Confidence 45789999999999999999999988999999999998 7777653
No 255
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=98.16 E-value=9.8e-06 Score=75.06 Aligned_cols=80 Identities=14% Similarity=0.073 Sum_probs=63.9
Q ss_pred CCCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCeeE
Q 022298 155 RPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDY 234 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fDl 234 (299)
++..+||+.||.|..+.+.+.+++ +|+++|.|+.|+ +.+++ ++. +++++++++..++...+..+ ..+++|.
T Consensus 22 ~gg~~VD~T~G~GGHS~~il~~~g-~VigiD~Dp~Ai-~~A~~-L~~----~rv~lv~~~f~~l~~~L~~~--g~~~vDg 92 (285)
T 1wg8_A 22 PGGVYVDATLGGAGHARGILERGG-RVIGLDQDPEAV-ARAKG-LHL----PGLTVVQGNFRHLKRHLAAL--GVERVDG 92 (285)
T ss_dssp TTCEEEETTCTTSHHHHHHHHTTC-EEEEEESCHHHH-HHHHH-TCC----TTEEEEESCGGGHHHHHHHT--TCSCEEE
T ss_pred CCCEEEEeCCCCcHHHHHHHHCCC-EEEEEeCCHHHH-HHHHh-hcc----CCEEEEECCcchHHHHHHHc--CCCCcCE
Confidence 578999999999999999998854 799999999998 88877 533 47999999988764333211 1257999
Q ss_pred EEEcCCCCC
Q 022298 235 MSVTPPYTA 243 (299)
Q Consensus 235 I~iDPPY~~ 243 (299)
|++|++|..
T Consensus 93 IL~DLGvSS 101 (285)
T 1wg8_A 93 ILADLGVSS 101 (285)
T ss_dssp EEEECSCCH
T ss_pred EEeCCcccc
Confidence 999999875
No 256
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=98.16 E-value=7.8e-06 Score=76.54 Aligned_cols=76 Identities=12% Similarity=0.074 Sum_probs=62.4
Q ss_pred CCCEEEEECCccchHHHHHHHcC-CCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCee
Q 022298 155 RPGRWLDLYSGTGSVGIEAISRG-CSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFD 233 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSrG-a~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fD 233 (299)
.+.+|||+|||+|.++..++.+. ..+++++|+ +.++ +.+++|++..++.++++++.+|+.+.. ...+|
T Consensus 190 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~-~~a~~~~~~~~~~~~v~~~~~d~~~~~---------~~~~D 258 (359)
T 1x19_A 190 GVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAI-DLVNENAAEKGVADRMRGIAVDIYKES---------YPEAD 258 (359)
T ss_dssp TCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGH-HHHHHHHHHTTCTTTEEEEECCTTTSC---------CCCCS
T ss_pred CCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHH-HHHHHHHHhcCCCCCEEEEeCccccCC---------CCCCC
Confidence 46799999999999999988763 347999999 9998 999999999888878999999987631 13349
Q ss_pred EEEEcCCC
Q 022298 234 YMSVTPPY 241 (299)
Q Consensus 234 lI~iDPPY 241 (299)
+|++.-..
T Consensus 259 ~v~~~~vl 266 (359)
T 1x19_A 259 AVLFCRIL 266 (359)
T ss_dssp EEEEESCG
T ss_pred EEEEechh
Confidence 99886544
No 257
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.16 E-value=4.1e-06 Score=86.15 Aligned_cols=99 Identities=15% Similarity=0.087 Sum_probs=65.2
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCEEEEECCccchHHHHHHH--c--C----------CCEEEEEeCCHHHHHHHHHHHHHH
Q 022298 136 VKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAIS--R--G----------CSEVHFVEMDPWVVSNVLIPNLEW 201 (299)
Q Consensus 136 Vrealfn~L~~~~~~~~~~~~~~VLDLfaGSGalgIEAlS--r--G----------a~~V~~VD~n~~Al~~~a~~N~~~ 201 (299)
-++|++..+..... ....+..|||+|||+|.++..++. . | +.+|++||.|+.|+ ..++.. ..
T Consensus 392 Y~~AI~~al~d~~~--~~~~~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~-~~l~~~-~~ 467 (745)
T 3ua3_A 392 YGEAVVGALKDLGA--DGRKTVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAI-VTLKYM-NV 467 (745)
T ss_dssp HHHHHHHHHHHHHT--TCCSEEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHH-HHHHHH-HH
T ss_pred HHHHHHHHHHHhhc--ccCCCcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHH-HHHHHH-Hh
Confidence 45566655543210 001246899999999999754332 1 2 33899999999886 444443 34
Q ss_pred hCCCCcEEEEEcchhhHHHHHhhhcCCCCCeeEEEEcCC
Q 022298 202 TGFLDVSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPP 240 (299)
Q Consensus 202 ~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fDlI~iDPP 240 (299)
+++.++++++++|++++.--.. ....++.|+|+....
T Consensus 468 Ng~~d~VtVI~gd~eev~lp~~--~~~~ekVDIIVSElm 504 (745)
T 3ua3_A 468 RTWKRRVTIIESDMRSLPGIAK--DRGFEQPDIIVSELL 504 (745)
T ss_dssp HTTTTCSEEEESCGGGHHHHHH--HTTCCCCSEEEECCC
T ss_pred cCCCCeEEEEeCchhhcccccc--cCCCCcccEEEEecc
Confidence 8998999999999998842100 011368999998886
No 258
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=98.15 E-value=6.3e-06 Score=76.68 Aligned_cols=77 Identities=10% Similarity=0.063 Sum_probs=62.7
Q ss_pred CCEEEEECCccchHHHHHHHcC-CCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCeeE
Q 022298 156 PGRWLDLYSGTGSVGIEAISRG-CSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDY 234 (299)
Q Consensus 156 ~~~VLDLfaGSGalgIEAlSrG-a~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fDl 234 (299)
+.+|||+|||+|.++..++.+. ..+++++|+ +.++ +.+++++...+..++++++.+|+.+.... ..+.||+
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~-~~a~~~~~~~~~~~~v~~~~~d~~~~~~~------~~~~~D~ 251 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTR-DAARKTIHAHDLGGRVEFFEKNLLDARNF------EGGAADV 251 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGH-HHHHHHHHHTTCGGGEEEEECCTTCGGGG------TTCCEEE
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHH-HHHHHHHHhcCCCCceEEEeCCcccCccc------CCCCccE
Confidence 6899999999999999888763 357999999 7887 99999999988878899999998764210 1356999
Q ss_pred EEEcCC
Q 022298 235 MSVTPP 240 (299)
Q Consensus 235 I~iDPP 240 (299)
|++.--
T Consensus 252 v~~~~v 257 (352)
T 3mcz_A 252 VMLNDC 257 (352)
T ss_dssp EEEESC
T ss_pred EEEecc
Confidence 998443
No 259
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=98.15 E-value=3.9e-07 Score=84.74 Aligned_cols=43 Identities=14% Similarity=0.066 Sum_probs=38.0
Q ss_pred CCCCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHH
Q 022298 154 LRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIP 197 (299)
Q Consensus 154 ~~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~ 197 (299)
..+.+|||+|||||.++..++.+|+.+|++||+++.++ +...+
T Consensus 84 ~~g~~vLDiGcGTG~~t~~L~~~ga~~V~aVDvs~~mL-~~a~r 126 (291)
T 3hp7_A 84 VEDMITIDIGASTGGFTDVMLQNGAKLVYAVDVGTNQL-VWKLR 126 (291)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSSSCS-CHHHH
T ss_pred ccccEEEecCCCccHHHHHHHhCCCCEEEEEECCHHHH-HHHHH
Confidence 46789999999999999999999998999999999987 76433
No 260
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=98.14 E-value=1.1e-05 Score=71.84 Aligned_cols=72 Identities=8% Similarity=-0.005 Sum_probs=55.3
Q ss_pred CCCEEEEECCccchHHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCee
Q 022298 155 RPGRWLDLYSGTGSVGIEAISR-GCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFD 233 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSr-Ga~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fD 233 (299)
.+.+|||+|||+|.++..++.+ +..+|+++|+++.++ +.++++. .++.++.+|+.+.. ...+.||
T Consensus 85 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~-~~a~~~~------~~~~~~~~d~~~~~-------~~~~~fD 150 (269)
T 1p91_A 85 KATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAI-KAAAKRY------PQVTFCVASSHRLP-------FSDTSMD 150 (269)
T ss_dssp TCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHH-HHHHHHC------TTSEEEECCTTSCS-------BCTTCEE
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHH-HHHHHhC------CCcEEEEcchhhCC-------CCCCcee
Confidence 4789999999999999988876 234799999999998 8887764 23578888876531 1246899
Q ss_pred EEEEcCC
Q 022298 234 YMSVTPP 240 (299)
Q Consensus 234 lI~iDPP 240 (299)
+|++...
T Consensus 151 ~v~~~~~ 157 (269)
T 1p91_A 151 AIIRIYA 157 (269)
T ss_dssp EEEEESC
T ss_pred EEEEeCC
Confidence 9997544
No 261
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=98.14 E-value=4e-06 Score=79.02 Aligned_cols=77 Identities=17% Similarity=0.137 Sum_probs=61.1
Q ss_pred CCCEEEEECCccchHHHHHHHcC-CCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCee
Q 022298 155 RPGRWLDLYSGTGSVGIEAISRG-CSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFD 233 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSrG-a~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fD 233 (299)
...+|||+|||+|.++++++.+. ..+++++|+ +.++ +.+++|++..++.++++++.+|+++.. + ...+.||
T Consensus 179 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~-~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~-~~p~~~D 250 (363)
T 3dp7_A 179 HPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQL-EMMRKQTAGLSGSERIHGHGANLLDRD-----V-PFPTGFD 250 (363)
T ss_dssp CCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHH-HHHHHHHTTCTTGGGEEEEECCCCSSS-----C-CCCCCCS
T ss_pred CCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHH-HHHHHHHHhcCcccceEEEEccccccC-----C-CCCCCcC
Confidence 46799999999999999888753 347999999 9898 999999988887778999999987530 0 0025799
Q ss_pred EEEEcC
Q 022298 234 YMSVTP 239 (299)
Q Consensus 234 lI~iDP 239 (299)
+|++.-
T Consensus 251 ~v~~~~ 256 (363)
T 3dp7_A 251 AVWMSQ 256 (363)
T ss_dssp EEEEES
T ss_pred EEEEec
Confidence 999743
No 262
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=98.12 E-value=1.3e-05 Score=75.58 Aligned_cols=75 Identities=16% Similarity=0.051 Sum_probs=62.1
Q ss_pred CCCEEEEECCccchHHHHHHHcC-CCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCee
Q 022298 155 RPGRWLDLYSGTGSVGIEAISRG-CSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFD 233 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSrG-a~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fD 233 (299)
...+|||+|||+|.+++.++.+. ..+++++|+ +.++ +.+++++...++.++++++.+|+.+.. ...||
T Consensus 202 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~-~~a~~~~~~~~l~~~v~~~~~d~~~~~---------p~~~D 270 (369)
T 3gwz_A 202 GAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVA-EEARELLTGRGLADRCEILPGDFFETI---------PDGAD 270 (369)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHH-HHHHHHHHHTTCTTTEEEEECCTTTCC---------CSSCS
T ss_pred cCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHH-HHHHHhhhhcCcCCceEEeccCCCCCC---------CCCce
Confidence 46899999999999999888763 347999999 9998 999999999988888999999987321 13799
Q ss_pred EEEEcCC
Q 022298 234 YMSVTPP 240 (299)
Q Consensus 234 lI~iDPP 240 (299)
+|++.--
T Consensus 271 ~v~~~~v 277 (369)
T 3gwz_A 271 VYLIKHV 277 (369)
T ss_dssp EEEEESC
T ss_pred EEEhhhh
Confidence 9998543
No 263
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=98.10 E-value=6.3e-06 Score=74.58 Aligned_cols=46 Identities=11% Similarity=0.052 Sum_probs=36.4
Q ss_pred CCCCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHH
Q 022298 154 LRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLE 200 (299)
Q Consensus 154 ~~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~ 200 (299)
..+.+|||+|||+|...+.+...+..+|+++|+++.++ +.++++++
T Consensus 70 ~~~~~vLDiGcG~G~~~~l~~~~~~~~v~gvD~s~~~l-~~a~~~~~ 115 (289)
T 2g72_A 70 VSGRTLIDIGSGPTVYQLLSACSHFEDITMTDFLEVNR-QELGRWLQ 115 (289)
T ss_dssp SCCSEEEEETCTTCCGGGTTGGGGCSEEEEECSCHHHH-HHHHHHHT
T ss_pred CCCCeEEEECCCcChHHHHhhccCCCeEEEeCCCHHHH-HHHHHHHh
Confidence 35789999999999966544444445899999999998 88888654
No 264
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=98.09 E-value=9.1e-06 Score=75.16 Aligned_cols=72 Identities=10% Similarity=0.001 Sum_probs=60.1
Q ss_pred CCEEEEECCccchHHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCeeE
Q 022298 156 PGRWLDLYSGTGSVGIEAISR-GCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDY 234 (299)
Q Consensus 156 ~~~VLDLfaGSGalgIEAlSr-Ga~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fDl 234 (299)
..+|||+|||+|.++..++.+ ...+++++|+ +.++ +.+++++...++.++++++.+|+.+.. ...||+
T Consensus 170 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~-~~a~~~~~~~~~~~~v~~~~~d~~~~~---------p~~~D~ 238 (332)
T 3i53_A 170 LGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPA-SAAHRRFLDTGLSGRAQVVVGSFFDPL---------PAGAGG 238 (332)
T ss_dssp GSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHH-HHHHHHHHHTTCTTTEEEEECCTTSCC---------CCSCSE
T ss_pred CCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHH-HHHHHhhhhcCcCcCeEEecCCCCCCC---------CCCCcE
Confidence 579999999999999988775 3447999999 9998 999999999888788999999986321 127999
Q ss_pred EEEc
Q 022298 235 MSVT 238 (299)
Q Consensus 235 I~iD 238 (299)
|++-
T Consensus 239 v~~~ 242 (332)
T 3i53_A 239 YVLS 242 (332)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 9974
No 265
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=98.08 E-value=4.2e-06 Score=71.09 Aligned_cols=75 Identities=9% Similarity=-0.032 Sum_probs=51.7
Q ss_pred CCCEEEEECCccchHHHHHHHc-C--CCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHH------------
Q 022298 155 RPGRWLDLYSGTGSVGIEAISR-G--CSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFL------------ 219 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSr-G--a~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l------------ 219 (299)
++.+|||+|||+|.+++.++.+ + ..+|+++|+++.+ . . .+++++++|+.+..
T Consensus 22 ~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~--~----------~-~~v~~~~~d~~~~~~~~~~~~~~i~~ 88 (201)
T 2plw_A 22 KNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD--P----------I-PNVYFIQGEIGKDNMNNIKNINYIDN 88 (201)
T ss_dssp TTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC--C----------C-TTCEEEECCTTTTSSCCC--------
T ss_pred CCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC--C----------C-CCceEEEccccchhhhhhcccccccc
Confidence 4679999999999999998876 3 3589999999842 1 1 23677888876542
Q ss_pred -------HHHhhhcCCCCCeeEEEEcCCCCC
Q 022298 220 -------ERAEQFVGKDGPFDYMSVTPPYTA 243 (299)
Q Consensus 220 -------~~~~~~~~~~~~fDlI~iDPPY~~ 243 (299)
...... .....||+|++|++...
T Consensus 89 ~~~~~~~~~~~~~-~~~~~fD~v~~~~~~~~ 118 (201)
T 2plw_A 89 MNNNSVDYKLKEI-LQDKKIDIILSDAAVPC 118 (201)
T ss_dssp ---CHHHHHHHHH-HTTCCEEEEEECCCCCC
T ss_pred ccchhhHHHHHhh-cCCCcccEEEeCCCcCC
Confidence 000000 02368999999986543
No 266
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=98.07 E-value=3.7e-06 Score=77.67 Aligned_cols=74 Identities=11% Similarity=-0.001 Sum_probs=61.1
Q ss_pred CEEEEECCccchHHHHHHHcC-CCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCeeEE
Q 022298 157 GRWLDLYSGTGSVGIEAISRG-CSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDYM 235 (299)
Q Consensus 157 ~~VLDLfaGSGalgIEAlSrG-a~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fDlI 235 (299)
.+|||+|||+|.++..++.+. ..+++++|+ +.++ +.+++|+...++.++++++.+|+.+.. .+.||+|
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~-~~a~~~~~~~~~~~~v~~~~~d~~~~~---------~~~~D~v 237 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSL-GVARDNLSSLLAGERVSLVGGDMLQEV---------PSNGDIY 237 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCT-HHHHHHTHHHHHTTSEEEEESCTTTCC---------CSSCSEE
T ss_pred CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHH-HHHHHHHhhcCCCCcEEEecCCCCCCC---------CCCCCEE
Confidence 899999999999999888762 347999999 9998 999999988877677999999987521 2579999
Q ss_pred EEcCCC
Q 022298 236 SVTPPY 241 (299)
Q Consensus 236 ~iDPPY 241 (299)
++.-..
T Consensus 238 ~~~~vl 243 (334)
T 2ip2_A 238 LLSRII 243 (334)
T ss_dssp EEESCG
T ss_pred EEchhc
Confidence 986543
No 267
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=98.05 E-value=8.1e-06 Score=75.86 Aligned_cols=79 Identities=18% Similarity=0.168 Sum_probs=61.4
Q ss_pred CCCEEEEECCccchHHHHHHHcCCCE--EEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCe
Q 022298 155 RPGRWLDLYSGTGSVGIEAISRGCSE--VHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPF 232 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSrGa~~--V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~f 232 (299)
...+++|||||.|.+++.+.+.|... |.++|+|+.|+ +..+.|.. + ..++.+|+.++.... +.. ...+
T Consensus 15 ~~~~vidLFaG~GG~~~g~~~aG~~~~~v~a~E~d~~a~-~ty~~N~~-----~-~~~~~~DI~~i~~~~--i~~-~~~~ 84 (295)
T 2qrv_A 15 KPIRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSI-TVGMVRHQ-----G-KIMYVGDVRSVTQKH--IQE-WGPF 84 (295)
T ss_dssp CCEEEEEETCTTTHHHHHHHHTTBCEEEEEEECCCHHHH-HHHHHHTT-----T-CEEEECCGGGCCHHH--HHH-TCCC
T ss_pred CCCEEEEeCcCccHHHHHHHHCCCccceEEEEECCHHHH-HHHHHhCC-----C-CceeCCChHHccHHH--hcc-cCCc
Confidence 45689999999999999888889876 79999999997 88888842 2 356789988765321 110 1479
Q ss_pred eEEEEcCCCCC
Q 022298 233 DYMSVTPPYTA 243 (299)
Q Consensus 233 DlI~iDPPY~~ 243 (299)
|+++..||+..
T Consensus 85 Dll~ggpPCQ~ 95 (295)
T 2qrv_A 85 DLVIGGSPCND 95 (295)
T ss_dssp SEEEECCCCGG
T ss_pred CEEEecCCCcc
Confidence 99999999863
No 268
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=98.05 E-value=3.4e-06 Score=71.30 Aligned_cols=74 Identities=12% Similarity=-0.035 Sum_probs=51.1
Q ss_pred CCCEEEEECCccchHHHHHHHc-CC---------CEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEE-EcchhhHHHH--
Q 022298 155 RPGRWLDLYSGTGSVGIEAISR-GC---------SEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIH-TVRVETFLER-- 221 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSr-Ga---------~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi-~~D~~~~l~~-- 221 (299)
.+.+|||+|||+|.+++.++.+ |. .+|+++|+++.+. . .+++++ ++|+......
T Consensus 22 ~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~~------------~-~~~~~~~~~d~~~~~~~~~ 88 (196)
T 2nyu_A 22 PGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIFP------------L-EGATFLCPADVTDPRTSQR 88 (196)
T ss_dssp TTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCCC------------C-TTCEEECSCCTTSHHHHHH
T ss_pred CCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhccc------------C-CCCeEEEeccCCCHHHHHH
Confidence 5789999999999999998876 54 6899999998431 1 235677 7886543211
Q ss_pred HhhhcCCCCCeeEEEEcCCCC
Q 022298 222 AEQFVGKDGPFDYMSVTPPYT 242 (299)
Q Consensus 222 ~~~~~~~~~~fDlI~iDPPY~ 242 (299)
.... ...+.||+|++|++..
T Consensus 89 ~~~~-~~~~~fD~V~~~~~~~ 108 (196)
T 2nyu_A 89 ILEV-LPGRRADVILSDMAPN 108 (196)
T ss_dssp HHHH-SGGGCEEEEEECCCCC
T ss_pred HHHh-cCCCCCcEEEeCCCCC
Confidence 0000 1135799999998654
No 269
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=97.98 E-value=1.4e-05 Score=69.25 Aligned_cols=66 Identities=18% Similarity=0.177 Sum_probs=51.7
Q ss_pred CCCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCeeE
Q 022298 155 RPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDY 234 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fDl 234 (299)
.+.+|||+|||+|.++..++.+ +++|+++.++ +.+++| +++++++|+.++. ...+.||+
T Consensus 47 ~~~~vLDiG~G~G~~~~~l~~~-----~~vD~s~~~~-~~a~~~--------~~~~~~~d~~~~~-------~~~~~fD~ 105 (219)
T 1vlm_A 47 PEGRGVEIGVGTGRFAVPLKIK-----IGVEPSERMA-EIARKR--------GVFVLKGTAENLP-------LKDESFDF 105 (219)
T ss_dssp CSSCEEEETCTTSTTHHHHTCC-----EEEESCHHHH-HHHHHT--------TCEEEECBTTBCC-------SCTTCEEE
T ss_pred CCCcEEEeCCCCCHHHHHHHHH-----hccCCCHHHH-HHHHhc--------CCEEEEcccccCC-------CCCCCeeE
Confidence 3789999999999999876544 9999999998 888887 2567888876531 12468999
Q ss_pred EEEcCCC
Q 022298 235 MSVTPPY 241 (299)
Q Consensus 235 I~iDPPY 241 (299)
|++.-..
T Consensus 106 v~~~~~l 112 (219)
T 1vlm_A 106 ALMVTTI 112 (219)
T ss_dssp EEEESCG
T ss_pred EEEcchH
Confidence 9987653
No 270
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=97.97 E-value=6.3e-07 Score=82.35 Aligned_cols=73 Identities=19% Similarity=0.015 Sum_probs=51.5
Q ss_pred CCCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHH-hCCCCcEEEE--EcchhhHHHHHhhhcCCCCC
Q 022298 155 RPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEW-TGFLDVSSIH--TVRVETFLERAEQFVGKDGP 231 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~-~g~~~~~~vi--~~D~~~~l~~~~~~~~~~~~ 231 (299)
++.+|||||||+|.++..++.+ .+|++||+++ .+ ..++++... .....+++++ ++|+.++ ..++
T Consensus 82 ~g~~VLDlGcGtG~~s~~la~~--~~V~gVD~s~-m~-~~a~~~~~~~~~~~~~v~~~~~~~D~~~l---------~~~~ 148 (276)
T 2wa2_A 82 LKGTVVDLGCGRGSWSYYAASQ--PNVREVKAYT-LG-TSGHEKPRLVETFGWNLITFKSKVDVTKM---------EPFQ 148 (276)
T ss_dssp CCEEEEEESCTTCHHHHHHHTS--TTEEEEEEEC-CC-CTTSCCCCCCCCTTGGGEEEECSCCGGGC---------CCCC
T ss_pred CCCEEEEeccCCCHHHHHHHHc--CCEEEEECch-hh-hhhhhchhhhhhcCCCeEEEeccCcHhhC---------CCCC
Confidence 5789999999999999988888 3699999998 33 233222100 0111146788 8898763 1468
Q ss_pred eeEEEEcCC
Q 022298 232 FDYMSVTPP 240 (299)
Q Consensus 232 fDlI~iDPP 240 (299)
||+|++|..
T Consensus 149 fD~Vvsd~~ 157 (276)
T 2wa2_A 149 ADTVLCDIG 157 (276)
T ss_dssp CSEEEECCC
T ss_pred cCEEEECCC
Confidence 999999987
No 271
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=97.95 E-value=4.6e-05 Score=67.18 Aligned_cols=84 Identities=14% Similarity=-0.060 Sum_probs=59.9
Q ss_pred CCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCC--CCcEEEEEcchhhH--------------H
Q 022298 156 PGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGF--LDVSSIHTVRVETF--------------L 219 (299)
Q Consensus 156 ~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~--~~~~~vi~~D~~~~--------------l 219 (299)
..+||++||| .-++.++.....+|+.||.|++-+ +.+++|++..|+ .++++++.+|+.+. +
T Consensus 31 a~~VLEiGtG--ySTl~lA~~~~g~VvtvE~d~~~~-~~ar~~l~~~g~~~~~~I~~~~gda~~~~~wg~p~~~~~~~~l 107 (202)
T 3cvo_A 31 AEVILEYGSG--GSTVVAAELPGKHVTSVESDRAWA-RMMKAWLAANPPAEGTEVNIVWTDIGPTGDWGHPVSDAKWRSY 107 (202)
T ss_dssp CSEEEEESCS--HHHHHHHTSTTCEEEEEESCHHHH-HHHHHHHHHSCCCTTCEEEEEECCCSSBCGGGCBSSSTTGGGT
T ss_pred CCEEEEECch--HHHHHHHHcCCCEEEEEeCCHHHH-HHHHHHHHHcCCCCCCceEEEEeCchhhhcccccccchhhhhH
Confidence 5799999985 444444443246899999999997 999999999998 78899999996532 1
Q ss_pred HH-Hhhhc--CCCCCeeEEEEcCCCC
Q 022298 220 ER-AEQFV--GKDGPFDYMSVTPPYT 242 (299)
Q Consensus 220 ~~-~~~~~--~~~~~fDlI~iDPPY~ 242 (299)
.. ..... ...++||+||+|=.+.
T Consensus 108 ~~~~~~i~~~~~~~~fDlIfIDg~k~ 133 (202)
T 3cvo_A 108 PDYPLAVWRTEGFRHPDVVLVDGRFR 133 (202)
T ss_dssp THHHHGGGGCTTCCCCSEEEECSSSH
T ss_pred HHHhhhhhccccCCCCCEEEEeCCCc
Confidence 11 10000 1136899999998754
No 272
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=97.94 E-value=1.1e-05 Score=76.96 Aligned_cols=74 Identities=11% Similarity=0.073 Sum_probs=51.5
Q ss_pred CCCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEE-EcchhhHHHHHhhhcCCCCCee
Q 022298 155 RPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIH-TVRVETFLERAEQFVGKDGPFD 233 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi-~~D~~~~l~~~~~~~~~~~~fD 233 (299)
.+.+|||+|||+|.+...++.+|. +|+++|+++.++ +.++++ +.......+ ..++.. +.. ..++||
T Consensus 107 ~~~~VLDiGcG~G~~~~~l~~~g~-~v~gvD~s~~~~-~~a~~~----~~~~~~~~~~~~~~~~-l~~------~~~~fD 173 (416)
T 4e2x_A 107 PDPFIVEIGCNDGIMLRTIQEAGV-RHLGFEPSSGVA-AKAREK----GIRVRTDFFEKATADD-VRR------TEGPAN 173 (416)
T ss_dssp SSCEEEEETCTTTTTHHHHHHTTC-EEEEECCCHHHH-HHHHTT----TCCEECSCCSHHHHHH-HHH------HHCCEE
T ss_pred CCCEEEEecCCCCHHHHHHHHcCC-cEEEECCCHHHH-HHHHHc----CCCcceeeechhhHhh-ccc------CCCCEE
Confidence 478999999999999998888887 799999999998 888776 332211111 122222 211 136899
Q ss_pred EEEEcCCC
Q 022298 234 YMSVTPPY 241 (299)
Q Consensus 234 lI~iDPPY 241 (299)
+|++.--+
T Consensus 174 ~I~~~~vl 181 (416)
T 4e2x_A 174 VIYAANTL 181 (416)
T ss_dssp EEEEESCG
T ss_pred EEEECChH
Confidence 99986543
No 273
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=97.91 E-value=3.5e-05 Score=69.91 Aligned_cols=82 Identities=11% Similarity=0.106 Sum_probs=52.8
Q ss_pred CCCEEEEECCccchHHHHHH----HcC-CCEE--EEEeCCHHHHHHHHHHHHHHh-CCCC-cEEEEEcchhhHHHHHhhh
Q 022298 155 RPGRWLDLYSGTGSVGIEAI----SRG-CSEV--HFVEMDPWVVSNVLIPNLEWT-GFLD-VSSIHTVRVETFLERAEQF 225 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAl----SrG-a~~V--~~VD~n~~Al~~~a~~N~~~~-g~~~-~~~vi~~D~~~~l~~~~~~ 225 (299)
++.+|||+|||+|.+++.++ .++ ...| +++|.++.++ +.+++++... ++.+ ++.+..+++.++..... .
T Consensus 52 ~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml-~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-~ 129 (292)
T 2aot_A 52 SEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQI-AKYKELVAKTSNLENVKFAWHKETSSEYQSRML-E 129 (292)
T ss_dssp SEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHH-HHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHH-T
T ss_pred CCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHH-HHHHHHHHhccCCCcceEEEEecchhhhhhhhc-c
Confidence 46799999999998876433 332 2334 9999999998 8999988653 3333 23445667665432110 0
Q ss_pred cCCCCCeeEEEEc
Q 022298 226 VGKDGPFDYMSVT 238 (299)
Q Consensus 226 ~~~~~~fDlI~iD 238 (299)
....++||+|++.
T Consensus 130 ~~~~~~fD~V~~~ 142 (292)
T 2aot_A 130 KKELQKWDFIHMI 142 (292)
T ss_dssp TTCCCCEEEEEEE
T ss_pred ccCCCceeEEEEe
Confidence 0124689999975
No 274
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=97.91 E-value=2.3e-05 Score=72.91 Aligned_cols=79 Identities=16% Similarity=0.146 Sum_probs=65.3
Q ss_pred CCCEEEEECCccchHHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHHHh-C--C-CCcEEEEEcchhhHHHHHhhhcCCC
Q 022298 155 RPGRWLDLYSGTGSVGIEAISR-GCSEVHFVEMDPWVVSNVLIPNLEWT-G--F-LDVSSIHTVRVETFLERAEQFVGKD 229 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSr-Ga~~V~~VD~n~~Al~~~a~~N~~~~-g--~-~~~~~vi~~D~~~~l~~~~~~~~~~ 229 (299)
...+||=+|.|.|++.-|++.. +..+|+.||+|+..+ +++++-+... + + +.+++++.+|+..+++. ..
T Consensus 83 ~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv-~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~------~~ 155 (294)
T 3o4f_A 83 HAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVV-SFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQ------TS 155 (294)
T ss_dssp CCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHH-HHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSC------SS
T ss_pred CCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHH-HHHHhcCccccccccCCCcEEEEechHHHHHhh------cc
Confidence 4689999999999999998875 678999999999998 9998876432 1 1 35799999999999843 35
Q ss_pred CCeeEEEEcCC
Q 022298 230 GPFDYMSVTPP 240 (299)
Q Consensus 230 ~~fDlI~iDPP 240 (299)
++||+|++|.+
T Consensus 156 ~~yDvIi~D~~ 166 (294)
T 3o4f_A 156 QTFDVIISDCT 166 (294)
T ss_dssp CCEEEEEESCC
T ss_pred ccCCEEEEeCC
Confidence 78999999975
No 275
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=97.88 E-value=7.4e-07 Score=81.36 Aligned_cols=73 Identities=19% Similarity=-0.001 Sum_probs=50.7
Q ss_pred CCCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHH-hCCCCcEEEE--EcchhhHHHHHhhhcCCCCC
Q 022298 155 RPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEW-TGFLDVSSIH--TVRVETFLERAEQFVGKDGP 231 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~-~g~~~~~~vi--~~D~~~~l~~~~~~~~~~~~ 231 (299)
++.+|||||||+|.++..++.+ .+|++||+++. + ..++++... .....++.++ ++|+.++ ..++
T Consensus 74 ~g~~VLDlGcGtG~~s~~la~~--~~V~gvD~s~m-~-~~a~~~~~~~~~~~~~v~~~~~~~D~~~l---------~~~~ 140 (265)
T 2oxt_A 74 LTGRVVDLGCGRGGWSYYAASR--PHVMDVRAYTL-G-VGGHEVPRITESYGWNIVKFKSRVDIHTL---------PVER 140 (265)
T ss_dssp CCEEEEEESCTTSHHHHHHHTS--TTEEEEEEECC-C-CSSCCCCCCCCBTTGGGEEEECSCCTTTS---------CCCC
T ss_pred CCCEEEEeCcCCCHHHHHHHHc--CcEEEEECchh-h-hhhhhhhhhhhccCCCeEEEecccCHhHC---------CCCC
Confidence 5789999999999999988887 46999999984 2 222221100 0001146778 8888763 1468
Q ss_pred eeEEEEcCC
Q 022298 232 FDYMSVTPP 240 (299)
Q Consensus 232 fDlI~iDPP 240 (299)
||+|++|..
T Consensus 141 fD~V~sd~~ 149 (265)
T 2oxt_A 141 TDVIMCDVG 149 (265)
T ss_dssp CSEEEECCC
T ss_pred CcEEEEeCc
Confidence 999999987
No 276
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=97.82 E-value=2.2e-05 Score=74.08 Aligned_cols=76 Identities=18% Similarity=0.277 Sum_probs=58.1
Q ss_pred CEEEEECCccchHHHHHHHcCC--CEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCeeE
Q 022298 157 GRWLDLYSGTGSVGIEAISRGC--SEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDY 234 (299)
Q Consensus 157 ~~VLDLfaGSGalgIEAlSrGa--~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fDl 234 (299)
-+++|||||.|.+++.+...|. ..|.++|+|+.|+ +..+.|... ..++.+|+.++.... +. ...+|+
T Consensus 4 ~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~-~ty~~N~~~------~~~~~~DI~~~~~~~--~~--~~~~D~ 72 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVAN-SVYKHNFPE------TNLLNRNIQQLTPQV--IK--KWNVDT 72 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHH-HHHHHHCTT------SCEECCCGGGCCHHH--HH--HTTCCE
T ss_pred CEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHH-HHHHHhCCC------CceeccccccCCHHH--hc--cCCCCE
Confidence 4799999999999998877786 6689999999997 899888632 235678887664321 10 136999
Q ss_pred EEEcCCCCC
Q 022298 235 MSVTPPYTA 243 (299)
Q Consensus 235 I~iDPPY~~ 243 (299)
++..||...
T Consensus 73 l~ggpPCQ~ 81 (333)
T 4h0n_A 73 ILMSPPCQP 81 (333)
T ss_dssp EEECCCCCC
T ss_pred EEecCCCcc
Confidence 999999864
No 277
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=97.80 E-value=4e-05 Score=75.82 Aligned_cols=84 Identities=18% Similarity=0.133 Sum_probs=60.3
Q ss_pred CCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHH----------Hhhh
Q 022298 156 PGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLER----------AEQF 225 (299)
Q Consensus 156 ~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~----------~~~~ 225 (299)
.-+++|||||.|.+++.+-..|...|.++|+|+.|+ +..+.|... .....++++|+.++... ...+
T Consensus 88 ~~~viDLFaG~GGlslG~~~aG~~~v~avE~d~~A~-~ty~~N~~~---~p~~~~~~~DI~~i~~~~~~~~~~~~~~~~i 163 (482)
T 3me5_A 88 AFRFIDLFAGIGGIRRGFESIGGQCVFTSEWNKHAV-RTYKANHYC---DPATHHFNEDIRDITLSHQEGVSDEAAAEHI 163 (482)
T ss_dssp SEEEEEESCTTSHHHHHHHTTTEEEEEEECCCHHHH-HHHHHHSCC---CTTTCEEESCTHHHHCTTCTTSCHHHHHHHH
T ss_pred cceEEEecCCccHHHHHHHHCCCEEEEEEeCCHHHH-HHHHHhccc---CCCcceeccchhhhhhccccccchhhHHhhh
Confidence 458999999999999887777887899999999997 888888521 11234678898876410 0000
Q ss_pred cCCCCCeeEEEEcCCCCC
Q 022298 226 VGKDGPFDYMSVTPPYTA 243 (299)
Q Consensus 226 ~~~~~~fDlI~iDPPY~~ 243 (299)
......+|+|+..||+..
T Consensus 164 ~~~~~~~Dvl~gGpPCQ~ 181 (482)
T 3me5_A 164 RQHIPEHDVLLAGFPCQP 181 (482)
T ss_dssp HHHSCCCSEEEEECCCCC
T ss_pred hhcCCCCCEEEecCCCcc
Confidence 001246899999999763
No 278
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=97.79 E-value=2.1e-05 Score=72.73 Aligned_cols=72 Identities=15% Similarity=0.170 Sum_probs=57.8
Q ss_pred EEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCeeEEEE
Q 022298 158 RWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDYMSV 237 (299)
Q Consensus 158 ~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fDlI~i 237 (299)
+|||||||.|.+++-+-..|..-|.++|+|+.|+ +..+.|. . ..++.+|+.++... .-...|+++.
T Consensus 2 kvidLFsG~GG~~~G~~~aG~~~v~a~e~d~~a~-~ty~~N~-----~--~~~~~~DI~~i~~~------~~~~~D~l~g 67 (331)
T 3ubt_Y 2 NLISLFSGAGGLDLGFQKAGFRIICANEYDKSIW-KTYESNH-----S--AKLIKGDISKISSD------EFPKCDGIIG 67 (331)
T ss_dssp EEEEESCTTCHHHHHHHHTTCEEEEEEECCTTTH-HHHHHHC-----C--SEEEESCGGGCCGG------GSCCCSEEEC
T ss_pred eEEEeCcCccHHHHHHHHCCCEEEEEEeCCHHHH-HHHHHHC-----C--CCcccCChhhCCHh------hCCcccEEEe
Confidence 7999999999999876667988899999999997 8988884 2 25788998876422 1257899999
Q ss_pred cCCCCC
Q 022298 238 TPPYTA 243 (299)
Q Consensus 238 DPPY~~ 243 (299)
-||...
T Consensus 68 gpPCQ~ 73 (331)
T 3ubt_Y 68 GPPSQS 73 (331)
T ss_dssp CCCGGG
T ss_pred cCCCCC
Confidence 999863
No 279
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=97.78 E-value=0.0002 Score=65.01 Aligned_cols=78 Identities=19% Similarity=0.078 Sum_probs=55.5
Q ss_pred CCEEEEECCcc---chHHHHHHHcC-CCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHH---H---hhh
Q 022298 156 PGRWLDLYSGT---GSVGIEAISRG-CSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLER---A---EQF 225 (299)
Q Consensus 156 ~~~VLDLfaGS---GalgIEAlSrG-a~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~---~---~~~ 225 (299)
..+|||+|||+ |.+...+.... ..+|++||+|+.++ +.+++++.. .++++++++|+.+.... . ..+
T Consensus 78 ~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l-~~Ar~~~~~---~~~v~~~~~D~~~~~~~~~~~~~~~~~ 153 (274)
T 2qe6_A 78 ISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVL-THGRALLAK---DPNTAVFTADVRDPEYILNHPDVRRMI 153 (274)
T ss_dssp CCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHH-HHHHHHHTT---CTTEEEEECCTTCHHHHHHSHHHHHHC
T ss_pred CCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHH-HHHHHhcCC---CCCeEEEEeeCCCchhhhccchhhccC
Confidence 47999999999 98875554432 24799999999998 999998743 24689999998764210 0 001
Q ss_pred cCCCCCeeEEEEcC
Q 022298 226 VGKDGPFDYMSVTP 239 (299)
Q Consensus 226 ~~~~~~fDlI~iDP 239 (299)
...+||+|++.-
T Consensus 154 --d~~~~d~v~~~~ 165 (274)
T 2qe6_A 154 --DFSRPAAIMLVG 165 (274)
T ss_dssp --CTTSCCEEEETT
T ss_pred --CCCCCEEEEEec
Confidence 124789999764
No 280
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=97.77 E-value=2.5e-05 Score=73.54 Aligned_cols=76 Identities=8% Similarity=0.147 Sum_probs=56.6
Q ss_pred CCEEEEECCccchHHHHHHHcCC--CEE-EEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCe
Q 022298 156 PGRWLDLYSGTGSVGIEAISRGC--SEV-HFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPF 232 (299)
Q Consensus 156 ~~~VLDLfaGSGalgIEAlSrGa--~~V-~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~f 232 (299)
.-+++|||||.|.+++.+...|. ..| .++|+|+.|+ +..+.|.... ++++|+.++.... +. ...+
T Consensus 10 ~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~-~ty~~N~~~~-------~~~~DI~~~~~~~--i~--~~~~ 77 (327)
T 3qv2_A 10 QVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIAN-KIYSKNFKEE-------VQVKNLDSISIKQ--IE--SLNC 77 (327)
T ss_dssp CEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHH-HHHHHHHCCC-------CBCCCTTTCCHHH--HH--HTCC
T ss_pred CCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHH-HHHHHHCCCC-------cccCChhhcCHHH--hc--cCCC
Confidence 45899999999999998777784 667 7999999997 9999996321 4567776653221 11 1369
Q ss_pred eEEEEcCCCCC
Q 022298 233 DYMSVTPPYTA 243 (299)
Q Consensus 233 DlI~iDPPY~~ 243 (299)
|+++..||...
T Consensus 78 Dil~ggpPCQ~ 88 (327)
T 3qv2_A 78 NTWFMSPPCQP 88 (327)
T ss_dssp CEEEECCCCTT
T ss_pred CEEEecCCccC
Confidence 99999999543
No 281
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=97.76 E-value=5e-05 Score=73.01 Aligned_cols=82 Identities=21% Similarity=0.156 Sum_probs=64.8
Q ss_pred CCCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHh---CC----CCcEEEEEcchhhHHHHHhhhcC
Q 022298 155 RPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWT---GF----LDVSSIHTVRVETFLERAEQFVG 227 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~---g~----~~~~~vi~~D~~~~l~~~~~~~~ 227 (299)
...+||=+|.|.|+..-|++.....+|+.||+|+..+ +++++-+... .+ .++++++.+|+..++++.. .
T Consensus 205 ~pkrVLIIGgGdG~~~revlkh~~~~V~~VEIDp~VV-e~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~---~ 280 (381)
T 3c6k_A 205 TGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVI-DGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYA---K 280 (381)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHH-HHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHH---H
T ss_pred CCCeEEEECCCcHHHHHHHHhcCCceeEEEccCHHHH-HHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhh---h
Confidence 4689999999999999999987778999999999998 9998754211 11 1358899999999997542 1
Q ss_pred CCCCeeEEEEcCC
Q 022298 228 KDGPFDYMSVTPP 240 (299)
Q Consensus 228 ~~~~fDlI~iDPP 240 (299)
..++||+|++|.+
T Consensus 281 ~~~~yDvIIvDl~ 293 (381)
T 3c6k_A 281 EGREFDYVINDLT 293 (381)
T ss_dssp HTCCEEEEEEECC
T ss_pred ccCceeEEEECCC
Confidence 2468999999953
No 282
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=97.68 E-value=5.7e-05 Score=69.27 Aligned_cols=75 Identities=19% Similarity=0.242 Sum_probs=52.1
Q ss_pred CCEEEEECCccch----HHHHHHHc-C----CCEEEEEeCCHHHHHHHHHHHHH---------------Hh--------C
Q 022298 156 PGRWLDLYSGTGS----VGIEAISR-G----CSEVHFVEMDPWVVSNVLIPNLE---------------WT--------G 203 (299)
Q Consensus 156 ~~~VLDLfaGSGa----lgIEAlSr-G----a~~V~~VD~n~~Al~~~a~~N~~---------------~~--------g 203 (299)
..+|||+|||||. +++.++.. | ..+|+++|+|+.++ +.+++|+. .+ +
T Consensus 106 ~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L-~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 106 EYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVL-EKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp CEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHH-HHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHH-HHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 5699999999997 66554443 3 13799999999998 99999851 00 0
Q ss_pred ---C----CCcEEEEEcchhhHHHHHhhhcCCCCCeeEEEE
Q 022298 204 ---F----LDVSSIHTVRVETFLERAEQFVGKDGPFDYMSV 237 (299)
Q Consensus 204 ---~----~~~~~vi~~D~~~~l~~~~~~~~~~~~fDlI~i 237 (299)
+ .+++++.++|+.+.- + ...++||+|++
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~~-----~-~~~~~fDlI~c 219 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEKQ-----Y-NVPGPFDAIFC 219 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCSS-----C-CCCCCEEEEEE
T ss_pred ceeechhhcccCeEEecccCCCC-----C-CcCCCeeEEEE
Confidence 0 125788888876520 0 01357999998
No 283
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=97.64 E-value=7e-06 Score=76.35 Aligned_cols=73 Identities=15% Similarity=0.097 Sum_probs=51.0
Q ss_pred CCCEEEEECCccchHHHHHHHcCCCEEEEEeC----CHHHHHHHHHHHHHHhCCCCcEEEEEc-chhhHHHHHhhhcCCC
Q 022298 155 RPGRWLDLYSGTGSVGIEAISRGCSEVHFVEM----DPWVVSNVLIPNLEWTGFLDVSSIHTV-RVETFLERAEQFVGKD 229 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~----n~~Al~~~a~~N~~~~g~~~~~~vi~~-D~~~~l~~~~~~~~~~ 229 (299)
++.+|||||||+|.++..++.+| +|++||+ ++..+ +.+ +.+..+. ++++++++ |+..+ ..
T Consensus 82 ~g~~VLDlGcG~G~~s~~la~~~--~V~gvD~~~~~~~~~~-~~~--~~~~~~~-~~v~~~~~~D~~~l---------~~ 146 (305)
T 2p41_A 82 PEGKVVDLGCGRGGWSYYCGGLK--NVREVKGLTKGGPGHE-EPI--PMSTYGW-NLVRLQSGVDVFFI---------PP 146 (305)
T ss_dssp CCEEEEEETCTTSHHHHHHHTST--TEEEEEEECCCSTTSC-CCC--CCCSTTG-GGEEEECSCCTTTS---------CC
T ss_pred CCCEEEEEcCCCCHHHHHHHhcC--CEEEEeccccCchhHH-HHH--HhhhcCC-CCeEEEeccccccC---------Cc
Confidence 47899999999999999888883 5999999 44322 211 1111221 35788888 87653 13
Q ss_pred CCeeEEEEcCCCC
Q 022298 230 GPFDYMSVTPPYT 242 (299)
Q Consensus 230 ~~fDlI~iDPPY~ 242 (299)
++||+|++|-+..
T Consensus 147 ~~fD~V~sd~~~~ 159 (305)
T 2p41_A 147 ERCDTLLCDIGES 159 (305)
T ss_dssp CCCSEEEECCCCC
T ss_pred CCCCEEEECCccc
Confidence 6899999998764
No 284
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=97.56 E-value=0.00016 Score=67.72 Aligned_cols=79 Identities=18% Similarity=0.159 Sum_probs=53.2
Q ss_pred CHHHHHHHHHHHHHhcCCCCCCCCCCEEEEECCccchHHHHHHHcCCCEEEEEeCCH---HHHHHHHHHHHHHhCCC---
Q 022298 132 MMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDP---WVVSNVLIPNLEWTGFL--- 205 (299)
Q Consensus 132 ttd~Vrealfn~L~~~~~~~~~~~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~---~Al~~~a~~N~~~~g~~--- 205 (299)
....+.+.+..... .++..|||.|||||+.+++|...|. +.+++|+++ ..+ ++++++++..+.-
T Consensus 227 kp~~l~~~~i~~~~--------~~~~~vlDpF~GsGtt~~aa~~~~r-~~ig~e~~~~~~~~~-~~~~~Rl~~~~~~~~~ 296 (319)
T 1eg2_A 227 KPAAVIERLVRALS--------HPGSTVLDFFAGSGVTARVAIQEGR-NSICTDAAPVFKEYY-QKQLTFLQDDGLIDKA 296 (319)
T ss_dssp CCHHHHHHHHHHHS--------CTTCEEEETTCTTCHHHHHHHHHTC-EEEEEESSTHHHHHH-HHHHHHC---------
T ss_pred CCHHHHHHHHHHhC--------CCCCEEEecCCCCCHHHHHHHHcCC-cEEEEECCccHHHHH-HHHHHHHHHccCCccc
Confidence 34455555555543 3588999999999999999998885 699999999 887 9999998876632
Q ss_pred CcEEEEEcchhhHHHH
Q 022298 206 DVSSIHTVRVETFLER 221 (299)
Q Consensus 206 ~~~~vi~~D~~~~l~~ 221 (299)
.+.+++ ....+++..
T Consensus 297 ~~~~~~-~~~~~~~~~ 311 (319)
T 1eg2_A 297 RSYEIV-EGAANFGAA 311 (319)
T ss_dssp CCEEEE-ECGGGTHHH
T ss_pred ceeeec-chHHHHHHH
Confidence 123333 344555544
No 285
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=97.55 E-value=8.4e-05 Score=69.36 Aligned_cols=60 Identities=15% Similarity=0.074 Sum_probs=48.1
Q ss_pred CCCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhH
Q 022298 155 RPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETF 218 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~ 218 (299)
++..|||.|||||+.+++|...|. +.+++|+++..+ ++++++++..+.. ...++.|+.+.
T Consensus 252 ~~~~VlDpF~GsGtt~~aa~~~gr-~~ig~e~~~~~~-~~~~~r~~~~~~~--~~~~~~~~~~i 311 (323)
T 1boo_A 252 PDDLVVDIFGGSNTTGLVAERESR-KWISFEMKPEYV-AASAFRFLDNNIS--EEKITDIYNRI 311 (323)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTC-EEEEEESCHHHH-HHHHGGGSCSCSC--HHHHHHHHHHH
T ss_pred CCCEEEECCCCCCHHHHHHHHcCC-CEEEEeCCHHHH-HHHHHHHHhcccc--hHHHHHHHHHH
Confidence 688999999999999999999885 699999999997 9999998766643 23344454443
No 286
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=97.47 E-value=0.00013 Score=62.47 Aligned_cols=60 Identities=10% Similarity=0.053 Sum_probs=44.6
Q ss_pred CCCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCeeE
Q 022298 155 RPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDY 234 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fDl 234 (299)
.+.+|||+|||+|.++..+ + .+|+++|+++. +++++++|+.+.. ...+.||+
T Consensus 67 ~~~~vLDiG~G~G~~~~~l---~-~~v~~~D~s~~-----------------~~~~~~~d~~~~~-------~~~~~fD~ 118 (215)
T 2zfu_A 67 ASLVVADFGCGDCRLASSI---R-NPVHCFDLASL-----------------DPRVTVCDMAQVP-------LEDESVDV 118 (215)
T ss_dssp TTSCEEEETCTTCHHHHHC---C-SCEEEEESSCS-----------------STTEEESCTTSCS-------CCTTCEEE
T ss_pred CCCeEEEECCcCCHHHHHh---h-ccEEEEeCCCC-----------------CceEEEeccccCC-------CCCCCEeE
Confidence 4689999999999998865 2 46999999986 1346778876521 12467999
Q ss_pred EEEcCCCC
Q 022298 235 MSVTPPYT 242 (299)
Q Consensus 235 I~iDPPY~ 242 (299)
|++.....
T Consensus 119 v~~~~~l~ 126 (215)
T 2zfu_A 119 AVFCLSLM 126 (215)
T ss_dssp EEEESCCC
T ss_pred EEEehhcc
Confidence 99987654
No 287
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=97.47 E-value=0.00021 Score=69.37 Aligned_cols=71 Identities=14% Similarity=0.055 Sum_probs=50.6
Q ss_pred CCCEEEEECCc------cchHHHHHHHc--CCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhH--HHHHhh
Q 022298 155 RPGRWLDLYSG------TGSVGIEAISR--GCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETF--LERAEQ 224 (299)
Q Consensus 155 ~~~~VLDLfaG------SGalgIEAlSr--Ga~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~--l~~~~~ 224 (299)
.+.+|||+||| +|..++..+.+ ...+|++||+|+.+. . . ..+++++++|+.+. ....
T Consensus 216 ~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~-~---------~-~~rI~fv~GDa~dlpf~~~l-- 282 (419)
T 3sso_A 216 QQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH-V---------D-ELRIRTIQGDQNDAEFLDRI-- 282 (419)
T ss_dssp SCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG-G---------C-BTTEEEEECCTTCHHHHHHH--
T ss_pred CCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh-h---------c-CCCcEEEEecccccchhhhh--
Confidence 56899999999 78888877754 334799999999862 1 1 24689999998763 2111
Q ss_pred hcCCCCCeeEEEEcC
Q 022298 225 FVGKDGPFDYMSVTP 239 (299)
Q Consensus 225 ~~~~~~~fDlI~iDP 239 (299)
....++||+|++|=
T Consensus 283 -~~~d~sFDlVisdg 296 (419)
T 3sso_A 283 -ARRYGPFDIVIDDG 296 (419)
T ss_dssp -HHHHCCEEEEEECS
T ss_pred -hcccCCccEEEECC
Confidence 01126899999974
No 288
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=97.38 E-value=9.4e-05 Score=69.00 Aligned_cols=71 Identities=11% Similarity=0.015 Sum_probs=52.4
Q ss_pred CCCEEEEECCccchHHHHHHHcC-CCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCee
Q 022298 155 RPGRWLDLYSGTGSVGIEAISRG-CSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFD 233 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSrG-a~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fD 233 (299)
.+.+|||+|||+|.++..++.+. ..+++++|+ +..+ . +++++..+..++++++.+|+.+.+ . .||
T Consensus 184 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~-~--~~~~~~~~~~~~v~~~~~d~~~~~---------p-~~D 249 (348)
T 3lst_A 184 ATGTVADVGGGRGGFLLTVLREHPGLQGVLLDR-AEVV-A--RHRLDAPDVAGRWKVVEGDFLREV---------P-HAD 249 (348)
T ss_dssp SSEEEEEETCTTSHHHHHHHHHCTTEEEEEEEC-HHHH-T--TCCCCCGGGTTSEEEEECCTTTCC---------C-CCS
T ss_pred CCceEEEECCccCHHHHHHHHHCCCCEEEEecC-HHHh-h--cccccccCCCCCeEEEecCCCCCC---------C-CCc
Confidence 46799999999999999888753 346899999 4444 3 555554566677999999986321 2 799
Q ss_pred EEEEcC
Q 022298 234 YMSVTP 239 (299)
Q Consensus 234 lI~iDP 239 (299)
+|++.-
T Consensus 250 ~v~~~~ 255 (348)
T 3lst_A 250 VHVLKR 255 (348)
T ss_dssp EEEEES
T ss_pred EEEEeh
Confidence 998754
No 289
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=97.31 E-value=0.0003 Score=63.88 Aligned_cols=83 Identities=7% Similarity=-0.184 Sum_probs=54.4
Q ss_pred CCCEEEEECCccchHHHHHHHc-------CC------CEEEEEeCCH---HHH----------HHHHHHHHHHh------
Q 022298 155 RPGRWLDLYSGTGSVGIEAISR-------GC------SEVHFVEMDP---WVV----------SNVLIPNLEWT------ 202 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSr-------Ga------~~V~~VD~n~---~Al----------~~~a~~N~~~~------ 202 (299)
...+|||+|+|+|.-.+.++.. +. .+++.+|.+| +.+ ..+++++++..
T Consensus 60 ~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~g 139 (257)
T 2qy6_A 60 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 139 (257)
T ss_dssp SEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCSE
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccccc
Confidence 3569999999999877664431 21 3799999987 222 13667776641
Q ss_pred ----CCC---CcEEEEEcchhhHHHHHhhhcCCCCCeeEEEEcC
Q 022298 203 ----GFL---DVSSIHTVRVETFLERAEQFVGKDGPFDYMSVTP 239 (299)
Q Consensus 203 ----g~~---~~~~vi~~D~~~~l~~~~~~~~~~~~fDlI~iDP 239 (299)
.+. .+++++.+|+.+.+..... .....||+||+||
T Consensus 140 ~~r~~~~~~~~~l~l~~GDa~~~l~~~~~--~~~~~~D~iflD~ 181 (257)
T 2qy6_A 140 CHRLLLDEGRVTLDLWFGDINELISQLDD--SLNQKVDAWFLDG 181 (257)
T ss_dssp EEEEEEC--CEEEEEEESCHHHHGGGSCG--GGTTCEEEEEECS
T ss_pred hhheeccCCceEEEEEECcHHHHHhhccc--ccCCeEEEEEECC
Confidence 121 2477999999987654210 0013799999998
No 290
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=97.28 E-value=0.0011 Score=62.86 Aligned_cols=82 Identities=17% Similarity=0.106 Sum_probs=62.8
Q ss_pred CCCEEEEECCccchHHHHHHHc-C-CCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCe
Q 022298 155 RPGRWLDLYSGTGSVGIEAISR-G-CSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPF 232 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSr-G-a~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~f 232 (299)
++..++|..+|.|.-+.+.+.+ | ..+|+++|+|+.|+ +.++ ++ ..+++++++++..++...+... +..+++
T Consensus 57 pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al-~~A~-rL----~~~Rv~lv~~nF~~l~~~L~~~-g~~~~v 129 (347)
T 3tka_A 57 PDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAI-AVAK-TI----DDPRFSIIHGPFSALGEYVAER-DLIGKI 129 (347)
T ss_dssp TTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHH-HHHT-TC----CCTTEEEEESCGGGHHHHHHHT-TCTTCE
T ss_pred CCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHH-HHHH-hh----cCCcEEEEeCCHHHHHHHHHhc-CCCCcc
Confidence 5789999999999999988876 3 45899999999998 7773 33 2467999999887765443211 112369
Q ss_pred eEEEEcCCCCC
Q 022298 233 DYMSVTPPYTA 243 (299)
Q Consensus 233 DlI~iDPPY~~ 243 (299)
|.|++|-.|..
T Consensus 130 DgILfDLGVSS 140 (347)
T 3tka_A 130 DGILLDLGVSS 140 (347)
T ss_dssp EEEEEECSCCH
T ss_pred cEEEECCccCH
Confidence 99999999875
No 291
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=97.22 E-value=0.00035 Score=64.64 Aligned_cols=63 Identities=10% Similarity=-0.001 Sum_probs=44.1
Q ss_pred CCCEEEEECCcc------chHHHHHHHcC-CCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEE-EEcchhhHHHHHhhhc
Q 022298 155 RPGRWLDLYSGT------GSVGIEAISRG-CSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSI-HTVRVETFLERAEQFV 226 (299)
Q Consensus 155 ~~~~VLDLfaGS------GalgIEAlSrG-a~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~v-i~~D~~~~l~~~~~~~ 226 (299)
.+.+|||+|||+ |+ .+.+...+ ..+|++||+++. + . ++++ +++|+.+..
T Consensus 63 ~g~~VLDLGcGsg~~~GpGs-~~~a~~~~~~~~V~gvDis~~-v-------------~-~v~~~i~gD~~~~~------- 119 (290)
T 2xyq_A 63 YNMRVIHFGAGSDKGVAPGT-AVLRQWLPTGTLLVDSDLNDF-V-------------S-DADSTLIGDCATVH------- 119 (290)
T ss_dssp TTCEEEEESCCCTTSBCHHH-HHHHHHSCTTCEEEEEESSCC-B-------------C-SSSEEEESCGGGCC-------
T ss_pred CCCEEEEeCCCCCCCCCcHH-HHHHHHcCCCCEEEEEECCCC-C-------------C-CCEEEEECccccCC-------
Confidence 578999999944 77 33333334 357999999986 1 1 3567 999987642
Q ss_pred CCCCCeeEEEEcCCC
Q 022298 227 GKDGPFDYMSVTPPY 241 (299)
Q Consensus 227 ~~~~~fDlI~iDPPY 241 (299)
..++||+|++|++.
T Consensus 120 -~~~~fD~Vvsn~~~ 133 (290)
T 2xyq_A 120 -TANKWDLIISDMYD 133 (290)
T ss_dssp -CSSCEEEEEECCCC
T ss_pred -ccCcccEEEEcCCc
Confidence 12579999999753
No 292
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=97.21 E-value=0.00027 Score=65.90 Aligned_cols=66 Identities=15% Similarity=-0.007 Sum_probs=49.4
Q ss_pred CCCEEEEECCccchHHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCee
Q 022298 155 RPGRWLDLYSGTGSVGIEAISR-GCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFD 233 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSr-Ga~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fD 233 (299)
...+|||+|||+|.++..++.+ ...+++++|+ +.++ +.++++ . +++++.+|+.+.+ ..||
T Consensus 188 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~-~~a~~~------~-~v~~~~~d~~~~~----------p~~D 248 (352)
T 1fp2_A 188 GLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVV-ENLSGS------N-NLTYVGGDMFTSI----------PNAD 248 (352)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHH-TTCCCB------T-TEEEEECCTTTCC----------CCCS
T ss_pred cCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHH-hhcccC------C-CcEEEeccccCCC----------CCcc
Confidence 3579999999999999988876 2347999999 8876 665541 2 3889999986421 2499
Q ss_pred EEEEcC
Q 022298 234 YMSVTP 239 (299)
Q Consensus 234 lI~iDP 239 (299)
+|++.-
T Consensus 249 ~v~~~~ 254 (352)
T 1fp2_A 249 AVLLKY 254 (352)
T ss_dssp EEEEES
T ss_pred EEEeeh
Confidence 998743
No 293
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=97.15 E-value=0.0005 Score=65.87 Aligned_cols=71 Identities=14% Similarity=0.028 Sum_probs=54.3
Q ss_pred CCCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCeeE
Q 022298 155 RPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDY 234 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fDl 234 (299)
.|.+||||||..|..+-.++.+|+ +|++||..+-.- .+. . ..+++++++|++.+.. ...+||+
T Consensus 211 ~G~~vlDLGAaPGGWT~~l~~rg~-~V~aVD~~~l~~--~l~------~-~~~V~~~~~d~~~~~~-------~~~~~D~ 273 (375)
T 4auk_A 211 NGMWAVDLGACPGGWTYQLVKRNM-WVYSVDNGPMAQ--SLM------D-TGQVTWLREDGFKFRP-------TRSNISW 273 (375)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTC-EEEEECSSCCCH--HHH------T-TTCEEEECSCTTTCCC-------CSSCEEE
T ss_pred CCCEEEEeCcCCCHHHHHHHHCCC-EEEEEEhhhcCh--hhc------c-CCCeEEEeCccccccC-------CCCCcCE
Confidence 588999999999999999999997 699999876432 221 1 1358899999887631 2367999
Q ss_pred EEEcCCCC
Q 022298 235 MSVTPPYT 242 (299)
Q Consensus 235 I~iDPPY~ 242 (299)
|++|.-..
T Consensus 274 vvsDm~~~ 281 (375)
T 4auk_A 274 MVCDMVEK 281 (375)
T ss_dssp EEECCSSC
T ss_pred EEEcCCCC
Confidence 99998543
No 294
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=97.12 E-value=0.00092 Score=63.57 Aligned_cols=79 Identities=16% Similarity=0.104 Sum_probs=57.1
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCEEEEECCccchHHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEc
Q 022298 135 VVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISR-GCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTV 213 (299)
Q Consensus 135 ~Vrealfn~L~~~~~~~~~~~~~~VLDLfaGSGalgIEAlSr-Ga~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~ 213 (299)
.+.+.+.+.+...... ....+..|||+|.|.|++..+++.+ .+.+|++||+|++.+ ..+++.. . .++++++.+
T Consensus 39 ~i~~~Iv~~~~l~~~~-~~~~~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~-~~L~~~~---~-~~~l~ii~~ 112 (353)
T 1i4w_A 39 TVYNKIFDKLDLTKTY-KHPEELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLY-KFLNAKF---E-GSPLQILKR 112 (353)
T ss_dssp HHHHHHHHHHCGGGTC-CCTTTCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHH-HHHHHHT---T-TSSCEEECS
T ss_pred HHHHHHHHhccCCccc-CcCCCCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHH-HHHHHhc---c-CCCEEEEEC
Confidence 4666666666432000 0003589999999999999998876 356899999999987 8887765 2 246899999
Q ss_pred chhhHH
Q 022298 214 RVETFL 219 (299)
Q Consensus 214 D~~~~l 219 (299)
|+.++-
T Consensus 113 D~l~~~ 118 (353)
T 1i4w_A 113 DPYDWS 118 (353)
T ss_dssp CTTCHH
T ss_pred Cccchh
Confidence 998774
No 295
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=97.11 E-value=0.00081 Score=63.08 Aligned_cols=70 Identities=14% Similarity=0.061 Sum_probs=52.1
Q ss_pred CCEEEEECCccchHHHHHHHcC-CCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCeeE
Q 022298 156 PGRWLDLYSGTGSVGIEAISRG-CSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDY 234 (299)
Q Consensus 156 ~~~VLDLfaGSGalgIEAlSrG-a~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fDl 234 (299)
..+|||+|||+|.+.++++.+. ..+++..|. |..+ +.+++++...+ .++++++.+|+++. ....+|+
T Consensus 180 ~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~-~~a~~~~~~~~-~~rv~~~~gD~~~~---------~~~~~D~ 247 (353)
T 4a6d_A 180 FPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVV-WTAKQHFSFQE-EEQIDFQEGDFFKD---------PLPEADL 247 (353)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHH-HHHHHHSCC---CCSEEEEESCTTTS---------CCCCCSE
T ss_pred CCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHH-HHHHHhhhhcc-cCceeeecCccccC---------CCCCceE
Confidence 5799999999999999988763 346888887 7777 88988876544 56799999997642 1234677
Q ss_pred EEE
Q 022298 235 MSV 237 (299)
Q Consensus 235 I~i 237 (299)
+++
T Consensus 248 ~~~ 250 (353)
T 4a6d_A 248 YIL 250 (353)
T ss_dssp EEE
T ss_pred EEe
Confidence 775
No 296
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=97.07 E-value=0.0005 Score=64.63 Aligned_cols=67 Identities=15% Similarity=0.004 Sum_probs=50.1
Q ss_pred CCCEEEEECCccchHHHHHHHcC-CCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCee
Q 022298 155 RPGRWLDLYSGTGSVGIEAISRG-CSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFD 233 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSrG-a~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fD 233 (299)
...+|||+|||+|.+...++.++ ..+++++|+ +.++ +.+++ . .+++++.+|+++.+ ..||
T Consensus 209 ~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~-~~a~~------~-~~v~~~~~d~~~~~----------~~~D 269 (372)
T 1fp1_D 209 GISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVI-ENAPP------L-SGIEHVGGDMFASV----------PQGD 269 (372)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHH-TTCCC------C-TTEEEEECCTTTCC----------CCEE
T ss_pred CCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHH-Hhhhh------c-CCCEEEeCCcccCC----------CCCC
Confidence 46799999999999999988775 347889999 8776 65543 1 34889999987521 2399
Q ss_pred EEEEcCC
Q 022298 234 YMSVTPP 240 (299)
Q Consensus 234 lI~iDPP 240 (299)
+|++.--
T Consensus 270 ~v~~~~~ 276 (372)
T 1fp1_D 270 AMILKAV 276 (372)
T ss_dssp EEEEESS
T ss_pred EEEEecc
Confidence 9998543
No 297
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=96.83 E-value=0.0062 Score=56.08 Aligned_cols=79 Identities=13% Similarity=0.030 Sum_probs=59.3
Q ss_pred CCCEEEEECCccchHHHHHHH--c--C--CCEEEEEeCCH--------------------------HHHHHHHHHHHHHh
Q 022298 155 RPGRWLDLYSGTGSVGIEAIS--R--G--CSEVHFVEMDP--------------------------WVVSNVLIPNLEWT 202 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlS--r--G--a~~V~~VD~n~--------------------------~Al~~~a~~N~~~~ 202 (299)
..+.||++|+..|.-++..+. + | ..+++++|... ..+ +.+++|++..
T Consensus 106 ~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~-~~ar~n~~~~ 184 (282)
T 2wk1_A 106 VPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSE-EEVRRNFRNY 184 (282)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCH-HHHHHHHHHT
T ss_pred CCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHH-HHHHHHHHHc
Confidence 367999999999987765432 1 1 34699999641 134 6789999999
Q ss_pred CCC-CcEEEEEcchhhHHHHHhhhcCCCCCeeEEEEcC
Q 022298 203 GFL-DVSSIHTVRVETFLERAEQFVGKDGPFDYMSVTP 239 (299)
Q Consensus 203 g~~-~~~~vi~~D~~~~l~~~~~~~~~~~~fDlI~iDP 239 (299)
|+. ++++++.+|+.+.+... ..++||+|++|-
T Consensus 185 gl~~~~I~li~Gda~etL~~~-----~~~~~d~vfIDa 217 (282)
T 2wk1_A 185 DLLDEQVRFLPGWFKDTLPTA-----PIDTLAVLRMDG 217 (282)
T ss_dssp TCCSTTEEEEESCHHHHSTTC-----CCCCEEEEEECC
T ss_pred CCCcCceEEEEeCHHHHHhhC-----CCCCEEEEEEcC
Confidence 984 78999999998876432 236899999996
No 298
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=96.79 E-value=0.0029 Score=65.46 Aligned_cols=57 Identities=21% Similarity=0.352 Sum_probs=41.1
Q ss_pred CCEEEEECCccchHHHHHHHcC------CCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHH
Q 022298 156 PGRWLDLYSGTGSVGIEAISRG------CSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFL 219 (299)
Q Consensus 156 ~~~VLDLfaGSGalgIEAlSrG------a~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l 219 (299)
..+|||||||.|.+++-+-..| ..-+.++|+|+.|+ +..+.|.- + ..+++.|+.+++
T Consensus 212 ~ltvIDLFAG~GGls~Gfe~AG~~~~~~f~vv~AvE~d~~A~-~Ty~~Nhp-----~-~~~~~~di~~i~ 274 (784)
T 4ft4_B 212 TATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDFNSFAC-QSLKYNHP-----Q-TEVRNEKADEFL 274 (784)
T ss_dssp EEEEEEETCTTSHHHHHHHHHHHHHTEEEEEEEEEESCHHHH-HHHHHHCT-----T-SEEEESCHHHHH
T ss_pred CCeEEEeCcCccHHHHHHHHhCcccCCceeEEEEEeCCHHHH-HHHHHHCC-----C-CceecCcHHHhh
Confidence 3579999999998876554444 45689999999997 88888841 2 345666665543
No 299
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=96.79 E-value=0.0011 Score=62.40 Aligned_cols=54 Identities=13% Similarity=0.044 Sum_probs=42.1
Q ss_pred CCCEEEEECCccchHHHHHHHcC-CCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhh
Q 022298 155 RPGRWLDLYSGTGSVGIEAISRG-CSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVET 217 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSrG-a~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~ 217 (299)
...+|||+|||+|.++++++.+. ..+++++|+ +.++ +.++++ ++++++.+|+++
T Consensus 203 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~-~~a~~~-------~~v~~~~~d~~~ 257 (368)
T 3reo_A 203 GLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVI-QDAPAF-------SGVEHLGGDMFD 257 (368)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHH-TTCCCC-------TTEEEEECCTTT
T ss_pred CCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHH-Hhhhhc-------CCCEEEecCCCC
Confidence 35799999999999999988753 347999999 7776 555432 458889999865
No 300
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=96.73 E-value=0.0013 Score=61.37 Aligned_cols=68 Identities=15% Similarity=-0.077 Sum_probs=49.9
Q ss_pred CCCEEEEECCccchHHHHHHHcC-CCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCee
Q 022298 155 RPGRWLDLYSGTGSVGIEAISRG-CSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFD 233 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSrG-a~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fD 233 (299)
...+|||+|||+|.++.+++.+. ..+++++|+ +.++ +.+++ .. +++++.+|+++. ...||
T Consensus 193 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~-~~a~~------~~-~v~~~~~d~~~~----------~~~~D 253 (358)
T 1zg3_A 193 GLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVV-GNLTG------NE-NLNFVGGDMFKS----------IPSAD 253 (358)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHH-SSCCC------CS-SEEEEECCTTTC----------CCCCS
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHH-hhccc------CC-CcEEEeCccCCC----------CCCce
Confidence 35799999999999999988764 347999999 6665 55443 23 388999998752 12599
Q ss_pred EEEEcCCC
Q 022298 234 YMSVTPPY 241 (299)
Q Consensus 234 lI~iDPPY 241 (299)
+|++.-..
T Consensus 254 ~v~~~~vl 261 (358)
T 1zg3_A 254 AVLLKWVL 261 (358)
T ss_dssp EEEEESCG
T ss_pred EEEEcccc
Confidence 99986543
No 301
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=96.66 E-value=0.0035 Score=66.99 Aligned_cols=81 Identities=20% Similarity=0.222 Sum_probs=58.7
Q ss_pred CCCEEEEECCccchHHHHHHHcCC-CEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHh--hhc-----
Q 022298 155 RPGRWLDLYSGTGSVGIEAISRGC-SEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAE--QFV----- 226 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSrGa-~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~--~~~----- 226 (299)
..-+++|||||.|.+++-+-..|. ..|.++|+|+.|+ +..+.|. .+ ..++.+|+.+++.... .+.
T Consensus 539 ~~l~~iDLFaG~GGlslGl~~AG~~~vv~avEid~~A~-~ty~~N~-----p~-~~~~~~DI~~l~~~~~~~di~~~~~~ 611 (1002)
T 3swr_A 539 PKLRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAA-QAFRLNN-----PG-STVFTEDCNILLKLVMAGETTNSRGQ 611 (1002)
T ss_dssp CCEEEEEESCTTSHHHHHHHHHTSEEEEEEECSSHHHH-HHHHHHC-----TT-SEEECSCHHHHHHHHHHTCSBCTTCC
T ss_pred CCCeEEEeccCccHHHHHHHHCCCCceEEEEECCHHHH-HHHHHhC-----CC-CccccccHHHHhhhccchhhhhhhhh
Confidence 345899999999999987766786 6788999999997 8888883 22 4577888877643210 000
Q ss_pred --CCCCCeeEEEEcCCCC
Q 022298 227 --GKDGPFDYMSVTPPYT 242 (299)
Q Consensus 227 --~~~~~fDlI~iDPPY~ 242 (299)
...+.+|+|+.-||..
T Consensus 612 ~lp~~~~vDll~GGpPCQ 629 (1002)
T 3swr_A 612 RLPQKGDVEMLCGGPPCQ 629 (1002)
T ss_dssp BCCCTTTCSEEEECCCCT
T ss_pred hcccCCCeeEEEEcCCCc
Confidence 0124689999999975
No 302
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=96.63 E-value=0.0018 Score=59.64 Aligned_cols=60 Identities=20% Similarity=0.122 Sum_probs=44.0
Q ss_pred CEEEEECCccch--HHHHHHHc--CCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhH
Q 022298 157 GRWLDLYSGTGS--VGIEAISR--GCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETF 218 (299)
Q Consensus 157 ~~VLDLfaGSGa--lgIEAlSr--Ga~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~ 218 (299)
.+|||||||+|+ ...+.+.+ ...+|++||.|+.++ +.+++++...+ ..+++++++|+.++
T Consensus 80 ~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mL-a~Ar~~l~~~~-~~~~~~v~aD~~~~ 143 (277)
T 3giw_A 80 RQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVL-TLSQGLLASTP-EGRTAYVEADMLDP 143 (277)
T ss_dssp CEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHH-HTTHHHHCCCS-SSEEEEEECCTTCH
T ss_pred CEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHH-HHHHHHhccCC-CCcEEEEEecccCh
Confidence 589999999733 22343332 234799999999998 89988875433 24589999999876
No 303
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=96.60 E-value=0.0019 Score=60.87 Aligned_cols=54 Identities=11% Similarity=0.018 Sum_probs=42.1
Q ss_pred CCCEEEEECCccchHHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhh
Q 022298 155 RPGRWLDLYSGTGSVGIEAISR-GCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVET 217 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSr-Ga~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~ 217 (299)
...+|||+|||+|.+..+++.+ ...+++++|+ +.++ +.++++ ++++++.+|+++
T Consensus 201 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~-~~a~~~-------~~v~~~~~D~~~ 255 (364)
T 3p9c_A 201 GLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVI-SEAPQF-------PGVTHVGGDMFK 255 (364)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHH-TTCCCC-------TTEEEEECCTTT
T ss_pred CCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHH-Hhhhhc-------CCeEEEeCCcCC
Confidence 4679999999999999988875 3347999999 7766 555432 458899999875
No 304
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=96.50 E-value=0.0073 Score=66.20 Aligned_cols=82 Identities=18% Similarity=0.237 Sum_probs=59.4
Q ss_pred CCCEEEEECCccchHHHHHHHcCC-CEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHh--hh------
Q 022298 155 RPGRWLDLYSGTGSVGIEAISRGC-SEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAE--QF------ 225 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSrGa-~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~--~~------ 225 (299)
..-+++|||||.|.+++-+-..|. ..+.++|+|+.|+ +..+.|. .+ ..++.+|+.+++.... ..
T Consensus 850 ~~l~viDLFsG~GGlslGfe~AG~~~vv~avEid~~A~-~ty~~N~-----p~-~~~~~~DI~~l~~~~~~gdi~~~~~~ 922 (1330)
T 3av4_A 850 PKLRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAA-QAFRLNN-----PG-TTVFTEDCNVLLKLVMAGEVTNSLGQ 922 (1330)
T ss_dssp CCEEEEEETCTTSHHHHHHHHTTSEEEEEEECCSHHHH-HHHHHHC-----TT-SEEECSCHHHHHHHHTTTCSBCSSCC
T ss_pred CCceEEecccCccHHHHHHHHCCCCceEEEEECCHHHH-HHHHHhC-----CC-CcEeeccHHHHhHhhhccchhhhhhh
Confidence 346899999999999987767786 5689999999997 8888883 22 3567888877654321 00
Q ss_pred -cCCCCCeeEEEEcCCCCC
Q 022298 226 -VGKDGPFDYMSVTPPYTA 243 (299)
Q Consensus 226 -~~~~~~fDlI~iDPPY~~ 243 (299)
....+.+|+|+.-||...
T Consensus 923 ~lp~~~~vDvl~GGpPCQ~ 941 (1330)
T 3av4_A 923 RLPQKGDVEMLCGGPPCQG 941 (1330)
T ss_dssp BCCCTTTCSEEEECCCCTT
T ss_pred hccccCccceEEecCCCcc
Confidence 001236899999999864
No 305
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=96.28 E-value=0.0097 Score=57.17 Aligned_cols=58 Identities=17% Similarity=0.159 Sum_probs=46.3
Q ss_pred CCCEEEEECCccchHHHHHH-Hc-C-CCEEEEEeCCHHHHHHHHHHHHHH--hCCC-CcEEEEEc
Q 022298 155 RPGRWLDLYSGTGSVGIEAI-SR-G-CSEVHFVEMDPWVVSNVLIPNLEW--TGFL-DVSSIHTV 213 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAl-Sr-G-a~~V~~VD~n~~Al~~~a~~N~~~--~g~~-~~~~vi~~ 213 (299)
++..|+|+||+.|.+++.++ .. | ..+|+++|-+|.++ +.+++|++. |+.. +++++++.
T Consensus 226 ~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~-~~L~~n~~~~~N~~~~~~v~~~~~ 289 (409)
T 2py6_A 226 DSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINL-QTLQNVLRRYTDTNFASRITVHGC 289 (409)
T ss_dssp SSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHH-HHHHHHHHHTTTSTTGGGEEEECS
T ss_pred CCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHH-HHHHHHHHhhhccCCCCCEEEEEe
Confidence 57899999999999999877 33 3 36899999999998 999999998 3322 45666553
No 306
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=96.16 E-value=0.001 Score=60.34 Aligned_cols=76 Identities=14% Similarity=0.057 Sum_probs=54.1
Q ss_pred CCCEEEEECCccchHHHHHHH-cCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEc-chhhHHHHHhhhcCCCCCe
Q 022298 155 RPGRWLDLYSGTGSVGIEAIS-RGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTV-RVETFLERAEQFVGKDGPF 232 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlS-rGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~-D~~~~l~~~~~~~~~~~~f 232 (299)
.+.+||||||++|.++-.++. .|+.+|+++|+...-. + --...+.+|. +.+++.++ |++.. ...++
T Consensus 78 ~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~gh-e-~P~~~~s~gw-n~v~fk~gvDv~~~---------~~~~~ 145 (267)
T 3p8z_A 78 PEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGH-E-EPVPMSTYGW-NIVKLMSGKDVFYL---------PPEKC 145 (267)
T ss_dssp CCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTS-C-CCCCCCCTTT-TSEEEECSCCGGGC---------CCCCC
T ss_pred CCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCc-c-CcchhhhcCc-CceEEEeccceeec---------CCccc
Confidence 567999999999999996654 6888999999987542 1 0012234555 44888888 97543 13679
Q ss_pred eEEEEcCCCC
Q 022298 233 DYMSVTPPYT 242 (299)
Q Consensus 233 DlI~iDPPY~ 242 (299)
|.|++|--=.
T Consensus 146 DtllcDIgeS 155 (267)
T 3p8z_A 146 DTLLCDIGES 155 (267)
T ss_dssp SEEEECCCCC
T ss_pred cEEEEecCCC
Confidence 9999997433
No 307
>4dkj_A Cytosine-specific methyltransferase; CG-specificity, DNA intercalation, CPG sequence, cytosine C5 methylation; HET: DNA C37 5CM SAH; 2.15A {Mycoplasma penetrans}
Probab=96.14 E-value=0.0033 Score=60.74 Aligned_cols=45 Identities=11% Similarity=-0.085 Sum_probs=36.8
Q ss_pred CCEEEEECCccchHHHHHHHcC--CCE----EEEEeCCHHHHHHHHHHHHHH
Q 022298 156 PGRWLDLYSGTGSVGIEAISRG--CSE----VHFVEMDPWVVSNVLIPNLEW 201 (299)
Q Consensus 156 ~~~VLDLfaGSGalgIEAlSrG--a~~----V~~VD~n~~Al~~~a~~N~~~ 201 (299)
.-+|+|||||.|++.+.+-..| ..- |.++|+|+.|+ +..+.|...
T Consensus 10 ~lrvldLFsGiGG~~~Gl~~aG~~~~~~~~~v~avEid~~A~-~ty~~n~~~ 60 (403)
T 4dkj_A 10 VIKVFEAFAGIGSQFKALKNIARSKNWEIQHSGMVEWFVDAI-VSYVAIHSK 60 (403)
T ss_dssp EEEEEEETCTTCHHHHHHHHHHHHHTEEEEEEEEECCBHHHH-HHHHHHHCS
T ss_pred cceEEEEecCcCHHHHHHHHhCCccccceeeEEEEecCHHHH-HHHHHHcCC
Confidence 4689999999999988665556 445 88999999997 899988753
No 308
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=95.43 E-value=0.0099 Score=53.27 Aligned_cols=32 Identities=22% Similarity=0.529 Sum_probs=26.0
Q ss_pred EEEEEcchhhHHHHHhhhcCCCCCeeEEEEcCCCCCC
Q 022298 208 SSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTAV 244 (299)
Q Consensus 208 ~~vi~~D~~~~l~~~~~~~~~~~~fDlI~iDPPY~~~ 244 (299)
.+++++|+.+++..+ ..++||+||+||||+..
T Consensus 5 ~~l~~gD~~~~l~~l-----~~~~vdlI~~DPPY~~~ 36 (260)
T 1g60_A 5 NKIHQMNCFDFLDQV-----ENKSVQLAVIDPPYNLS 36 (260)
T ss_dssp SSEEECCHHHHHHHS-----CTTCEEEEEECCCCSSC
T ss_pred CeEEechHHHHHHhc-----cccccCEEEECCCCCCC
Confidence 357899999988654 24689999999999876
No 309
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=95.14 E-value=0.0036 Score=58.35 Aligned_cols=74 Identities=14% Similarity=0.022 Sum_probs=48.8
Q ss_pred CCCEEEEECCccchHHHHHHH-cCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEc-chhhHHHHHhhhcCCCCCe
Q 022298 155 RPGRWLDLYSGTGSVGIEAIS-RGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTV-RVETFLERAEQFVGKDGPF 232 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlS-rGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~-D~~~~l~~~~~~~~~~~~f 232 (299)
.+.+||||||++|.++-.|+. .|+.+|+++|+...-- +- -..++.++. +-+.++.+ |+... ...++
T Consensus 94 ~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~h-e~-P~~~~ql~w-~lV~~~~~~Dv~~l---------~~~~~ 161 (321)
T 3lkz_A 94 PVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGH-EE-PQLVQSYGW-NIVTMKSGVDVFYR---------PSECC 161 (321)
T ss_dssp CCEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTS-CC-CCCCCBTTG-GGEEEECSCCTTSS---------CCCCC
T ss_pred CCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCc-cC-cchhhhcCC-cceEEEeccCHhhC---------CCCCC
Confidence 567999999999999996654 6888999999987621 10 000011222 12566666 76432 12679
Q ss_pred eEEEEcCC
Q 022298 233 DYMSVTPP 240 (299)
Q Consensus 233 DlI~iDPP 240 (299)
|+|++|--
T Consensus 162 D~ivcDig 169 (321)
T 3lkz_A 162 DTLLCDIG 169 (321)
T ss_dssp SEEEECCC
T ss_pred CEEEEECc
Confidence 99999986
No 310
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=94.77 E-value=0.02 Score=53.38 Aligned_cols=33 Identities=15% Similarity=0.318 Sum_probs=26.5
Q ss_pred cEEEE-EcchhhHHHHHhhhcCCCCCeeEEEEcCCCCCC
Q 022298 207 VSSIH-TVRVETFLERAEQFVGKDGPFDYMSVTPPYTAV 244 (299)
Q Consensus 207 ~~~vi-~~D~~~~l~~~~~~~~~~~~fDlI~iDPPY~~~ 244 (299)
..+++ ++|+.+++..+ ..++||+||+||||...
T Consensus 38 ~~~l~i~gD~l~~L~~l-----~~~svDlI~tDPPY~~~ 71 (319)
T 1eg2_A 38 TRHVYDVCDCLDTLAKL-----PDDSVQLIICDPPYNIM 71 (319)
T ss_dssp EEEEEEECCHHHHHHTS-----CTTCEEEEEECCCSBCC
T ss_pred cceEEECCcHHHHHHhC-----ccCCcCEEEECCCCCCC
Confidence 46788 99999988643 24689999999999875
No 311
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=94.65 E-value=0.011 Score=48.72 Aligned_cols=59 Identities=14% Similarity=0.075 Sum_probs=42.9
Q ss_pred CCCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCeeE
Q 022298 155 RPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDY 234 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fDl 234 (299)
.+.+|||++||+ +.+|+++.++ +.++++... +++++++|+.++... ....++||+
T Consensus 12 ~g~~vL~~~~g~---------------v~vD~s~~ml-~~a~~~~~~-----~~~~~~~d~~~~~~~----~~~~~~fD~ 66 (176)
T 2ld4_A 12 AGQFVAVVWDKS---------------SPVEALKGLV-DKLQALTGN-----EGRVSVENIKQLLQS----AHKESSFDI 66 (176)
T ss_dssp TTSEEEEEECTT---------------SCHHHHHHHH-HHHHHHTTT-----TSEEEEEEGGGGGGG----CCCSSCEEE
T ss_pred CCCEEEEecCCc---------------eeeeCCHHHH-HHHHHhccc-----CcEEEEechhcCccc----cCCCCCEeE
Confidence 578999999986 2389999998 888877532 267889998865310 002468999
Q ss_pred EEEc
Q 022298 235 MSVT 238 (299)
Q Consensus 235 I~iD 238 (299)
|++.
T Consensus 67 V~~~ 70 (176)
T 2ld4_A 67 ILSG 70 (176)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 9985
No 312
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=94.42 E-value=0.024 Score=52.62 Aligned_cols=34 Identities=15% Similarity=0.230 Sum_probs=26.7
Q ss_pred CcEEEEEcchhhHHHHHhhhcCCCCCeeEEEEcCCCCCC
Q 022298 206 DVSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTAV 244 (299)
Q Consensus 206 ~~~~vi~~D~~~~l~~~~~~~~~~~~fDlI~iDPPY~~~ 244 (299)
+...++++|+.+.+..+ ..++||+||+||||...
T Consensus 13 ~~~~ii~gD~~~~l~~l-----~~~svDlI~tDPPY~~~ 46 (323)
T 1boo_A 13 SNGSMYIGDSLELLESF-----PEESISLVMTSPPFALQ 46 (323)
T ss_dssp SSEEEEESCHHHHGGGS-----CSSCEEEEEECCCCSSS
T ss_pred CCceEEeCcHHHHHhhC-----CCCCeeEEEECCCCCCC
Confidence 35789999998876532 24689999999999865
No 313
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=93.99 E-value=0.029 Score=51.16 Aligned_cols=32 Identities=19% Similarity=0.375 Sum_probs=25.5
Q ss_pred cEEEEEcchhhHHHHHhhhcCCCCCeeEEEEcCCCCC
Q 022298 207 VSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTA 243 (299)
Q Consensus 207 ~~~vi~~D~~~~l~~~~~~~~~~~~fDlI~iDPPY~~ 243 (299)
+.+++++|+.+++..+ ..++||+|++||||..
T Consensus 21 ~~~i~~gD~~~~l~~l-----~~~s~DlIvtdPPY~~ 52 (297)
T 2zig_A 21 VHRLHVGDAREVLASF-----PEASVHLVVTSPPYWT 52 (297)
T ss_dssp CEEEEESCHHHHHTTS-----CTTCEEEEEECCCCCC
T ss_pred CCEEEECcHHHHHhhC-----CCCceeEEEECCCCCC
Confidence 4689999999876432 2468999999999974
No 314
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=92.07 E-value=0.091 Score=48.27 Aligned_cols=78 Identities=14% Similarity=0.029 Sum_probs=46.6
Q ss_pred CCCEEEEECCccchHHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCee
Q 022298 155 RPGRWLDLYSGTGSVGIEAISR-GCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFD 233 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSr-Ga~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fD 233 (299)
.+.+|||||||.|.++-.|+.+ |+..|+++|+.-+.. ...... +..+. + +..++.++... .....+||
T Consensus 74 ~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl~-~~pi~~-~~~g~-~-ii~~~~~~dv~-------~l~~~~~D 142 (277)
T 3evf_A 74 LEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGH-EKPMNV-QSLGW-N-IITFKDKTDIH-------RLEPVKCD 142 (277)
T ss_dssp CCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTC-CCCCCC-CBTTG-G-GEEEECSCCTT-------TSCCCCCS
T ss_pred CCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccCc-cccccc-CcCCC-C-eEEEeccceeh-------hcCCCCcc
Confidence 4679999999999999988765 777888888863210 000000 00111 2 33345543211 01246899
Q ss_pred EEEEcCCCCC
Q 022298 234 YMSVTPPYTA 243 (299)
Q Consensus 234 lI~iDPPY~~ 243 (299)
+|++|---+.
T Consensus 143 lVlsD~apns 152 (277)
T 3evf_A 143 TLLCDIGESS 152 (277)
T ss_dssp EEEECCCCCC
T ss_pred EEEecCccCc
Confidence 9999975443
No 315
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=91.71 E-value=0.1 Score=48.10 Aligned_cols=77 Identities=17% Similarity=0.038 Sum_probs=47.8
Q ss_pred CCCEEEEECCccchHHHHHHH-cCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEc--chhhHHHHHhhhcCCCCC
Q 022298 155 RPGRWLDLYSGTGSVGIEAIS-RGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTV--RVETFLERAEQFVGKDGP 231 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlS-rGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~--D~~~~l~~~~~~~~~~~~ 231 (299)
.+.+|||||||.|.++-.|+. .|+..|+++|+..... ...... +..+. + +...+. |+..+ ...+
T Consensus 90 ~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~-~~pi~~-~~~g~-~-ii~~~~~~dv~~l---------~~~~ 156 (282)
T 3gcz_A 90 PTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGH-EKPIMR-TTLGW-N-LIRFKDKTDVFNM---------EVIP 156 (282)
T ss_dssp CCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTS-CCCCCC-CBTTG-G-GEEEECSCCGGGS---------CCCC
T ss_pred CCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCcc-cccccc-ccCCC-c-eEEeeCCcchhhc---------CCCC
Confidence 567999999999999998875 5788899999975421 111100 01111 2 222332 43221 2478
Q ss_pred eeEEEEcCCCCCC
Q 022298 232 FDYMSVTPPYTAV 244 (299)
Q Consensus 232 fDlI~iDPPY~~~ 244 (299)
+|+|++|---+.+
T Consensus 157 ~DvVLSDmApnsG 169 (282)
T 3gcz_A 157 GDTLLCDIGESSP 169 (282)
T ss_dssp CSEEEECCCCCCS
T ss_pred cCEEEecCccCCC
Confidence 9999999766643
No 316
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=91.67 E-value=0.04 Score=50.32 Aligned_cols=74 Identities=14% Similarity=0.071 Sum_probs=45.4
Q ss_pred CCCCEEEEECCccchHHHHHHHc-CCC----EEEEEe--CCHHHHHHHHHHHHHHhCCCCcEEEEEc-chhhHHHHHhhh
Q 022298 154 LRPGRWLDLYSGTGSVGIEAISR-GCS----EVHFVE--MDPWVVSNVLIPNLEWTGFLDVSSIHTV-RVETFLERAEQF 225 (299)
Q Consensus 154 ~~~~~VLDLfaGSGalgIEAlSr-Ga~----~V~~VD--~n~~Al~~~a~~N~~~~g~~~~~~vi~~-D~~~~l~~~~~~ 225 (299)
.++.+||||||+-|+.+-.|+.+ +.. .|+++| +.|-.. +- .|. +-+++.++ |+.+.
T Consensus 72 kpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~~~~P~~~---~~-----~Gv-~~i~~~~G~Df~~~------- 135 (269)
T 2px2_A 72 QPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPGHEEPMLM---QS-----YGW-NIVTMKSGVDVFYK------- 135 (269)
T ss_dssp CCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTTSCCCCCC---CS-----TTG-GGEEEECSCCGGGS-------
T ss_pred CCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEccccccCCCcc---cC-----CCc-eEEEeeccCCccCC-------
Confidence 35889999999999999998876 222 344445 222110 00 111 22455557 98762
Q ss_pred cCCCCCeeEEEEcCCCCCCC
Q 022298 226 VGKDGPFDYMSVTPPYTAVD 245 (299)
Q Consensus 226 ~~~~~~fDlI~iDPPY~~~~ 245 (299)
...++|+|++|---+.+.
T Consensus 136 --~~~~~DvVLSDMAPnSG~ 153 (269)
T 2px2_A 136 --PSEISDTLLCDIGESSPS 153 (269)
T ss_dssp --CCCCCSEEEECCCCCCSC
T ss_pred --CCCCCCEEEeCCCCCCCc
Confidence 135899999998545443
No 317
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=89.94 E-value=0.19 Score=46.59 Aligned_cols=36 Identities=25% Similarity=0.156 Sum_probs=30.6
Q ss_pred CCCCEEEEECCccchHHHHHHHc-CCCEEEEEeCCHH
Q 022298 154 LRPGRWLDLYSGTGSVGIEAISR-GCSEVHFVEMDPW 189 (299)
Q Consensus 154 ~~~~~VLDLfaGSGalgIEAlSr-Ga~~V~~VD~n~~ 189 (299)
..+.+||||||+.|+++-.|+.+ |+..|+++|+...
T Consensus 80 ~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~ 116 (300)
T 3eld_A 80 RITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIE 116 (300)
T ss_dssp CCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCT
T ss_pred CCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEeccc
Confidence 36789999999999999988864 7878999999643
No 318
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=88.97 E-value=0.23 Score=50.30 Aligned_cols=81 Identities=15% Similarity=-0.002 Sum_probs=51.2
Q ss_pred CCEEEEECCccchHHHHHHHc----------C---CCEEEEEeCCHHHHHHHHHHHHHH---------------------
Q 022298 156 PGRWLDLYSGTGSVGIEAISR----------G---CSEVHFVEMDPWVVSNVLIPNLEW--------------------- 201 (299)
Q Consensus 156 ~~~VLDLfaGSGalgIEAlSr----------G---a~~V~~VD~n~~Al~~~a~~N~~~--------------------- 201 (299)
.-+|+|+|-|+|.-.+.++.. . .-+++.+|..|... +.+++-+..
T Consensus 59 ~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~-~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 137 (689)
T 3pvc_A 59 SCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHV-ADLASAHARWPELASFAEQLRAQWPLPLAG 137 (689)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCH-HHHHHHHTTCGGGHHHHHHHHHTCCCCCSE
T ss_pred ceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCH-HHHHHHHHhCcchhHHHHHHHHhCcccCCC
Confidence 458999999999877766542 1 13689999966443 444432211
Q ss_pred ---hCCCC---cEEEEEcchhhHHHHHhhhcCCCCCeeEEEEcC
Q 022298 202 ---TGFLD---VSSIHTVRVETFLERAEQFVGKDGPFDYMSVTP 239 (299)
Q Consensus 202 ---~g~~~---~~~vi~~D~~~~l~~~~~~~~~~~~fDlI~iDP 239 (299)
+.+.+ .++++.+|+.+.+..+. ......+|.+|+|+
T Consensus 138 ~~r~~~~~~~~~l~l~~gd~~~~l~~~~--~~~~~~~da~flD~ 179 (689)
T 3pvc_A 138 CHRILLADGAITLDLWFGDVNTLLPTLD--DSLNNQVDAWFLDG 179 (689)
T ss_dssp EEEEEETTTTEEEEEEESCHHHHGGGCC--GGGTTCEEEEEECS
T ss_pred ceEEEecCCcEEEEEEccCHHHHHhhcc--cccCCceeEEEECC
Confidence 11122 46788899998875431 00136799999998
No 319
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=88.22 E-value=3.8 Score=36.56 Aligned_cols=82 Identities=13% Similarity=0.032 Sum_probs=55.0
Q ss_pred CCCCEEEEECCccc---hHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHH---hhhcC
Q 022298 154 LRPGRWLDLYSGTG---SVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERA---EQFVG 227 (299)
Q Consensus 154 ~~~~~VLDLfaGSG---algIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~---~~~~~ 227 (299)
++++.+|=-|+++| +++..++..|+ +|+.+|.+++.+ +-+.+.++..|. ++..+++|+.+...-. .....
T Consensus 5 L~gKvalVTGas~GIG~aiA~~la~~Ga-~Vv~~~~~~~~~-~~~~~~i~~~g~--~~~~~~~Dvt~~~~v~~~~~~~~~ 80 (254)
T 4fn4_A 5 LKNKVVIVTGAGSGIGRAIAKKFALNDS-IVVAVELLEDRL-NQIVQELRGMGK--EVLGVKADVSKKKDVEEFVRRTFE 80 (254)
T ss_dssp GTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHH-HHHHHHHHHTTC--CEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHH-HHHHHHHHhcCC--cEEEEEccCCCHHHHHHHHHHHHH
Confidence 56888888887776 23344456788 599999999987 777777877763 4778888876432111 00111
Q ss_pred CCCCeeEEEEcC
Q 022298 228 KDGPFDYMSVTP 239 (299)
Q Consensus 228 ~~~~fDlI~iDP 239 (299)
..++.|+++-|-
T Consensus 81 ~~G~iDiLVNNA 92 (254)
T 4fn4_A 81 TYSRIDVLCNNA 92 (254)
T ss_dssp HHSCCCEEEECC
T ss_pred HcCCCCEEEECC
Confidence 226789999765
No 320
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=86.63 E-value=1.4 Score=40.82 Aligned_cols=73 Identities=14% Similarity=0.218 Sum_probs=42.5
Q ss_pred CCCEEEEECCccchHHHHH---H-HcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCC
Q 022298 155 RPGRWLDLYSGTGSVGIEA---I-SRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDG 230 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEA---l-SrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~ 230 (299)
.+.+||-.|| |.+|+.+ + .+|+.+|+++|.+++.+ +.+++ +|.. .++..+-.++......+. .+
T Consensus 190 ~g~~VlV~Ga--G~vG~~a~qlak~~Ga~~Vi~~~~~~~~~-~~a~~----lGa~---~vi~~~~~~~~~~~~~~~--~g 257 (371)
T 1f8f_A 190 PASSFVTWGA--GAVGLSALLAAKVCGASIIIAVDIVESRL-ELAKQ----LGAT---HVINSKTQDPVAAIKEIT--DG 257 (371)
T ss_dssp TTCEEEEESC--SHHHHHHHHHHHHHTCSEEEEEESCHHHH-HHHHH----HTCS---EEEETTTSCHHHHHHHHT--TS
T ss_pred CCCEEEEECC--CHHHHHHHHHHHHcCCCeEEEECCCHHHH-HHHHH----cCCC---EEecCCccCHHHHHHHhc--CC
Confidence 5789999976 4555543 3 36887899999999886 76643 5643 233322122222211111 23
Q ss_pred CeeEEEEcC
Q 022298 231 PFDYMSVTP 239 (299)
Q Consensus 231 ~fDlI~iDP 239 (299)
.+|+||-.-
T Consensus 258 g~D~vid~~ 266 (371)
T 1f8f_A 258 GVNFALEST 266 (371)
T ss_dssp CEEEEEECS
T ss_pred CCcEEEECC
Confidence 799987543
No 321
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=86.14 E-value=0.56 Score=43.79 Aligned_cols=81 Identities=11% Similarity=-0.018 Sum_probs=48.5
Q ss_pred HHHHHHHHhcCCCCCCCCCCEEEEECC------ccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEE
Q 022298 138 GAAFDILQSAGGCPASLRPGRWLDLYS------GTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIH 211 (299)
Q Consensus 138 ealfn~L~~~~~~~~~~~~~~VLDLfa------GSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi 211 (299)
..+++.|+.-.- ..-.+.+|||||| -.|+.-+.-+......|+++|+++-.. ..+ .++
T Consensus 94 tqlcqyl~~~~~--~vp~gmrVLDLGA~s~kg~APGS~VLr~~~p~g~~VVavDL~~~~s------------da~--~~I 157 (344)
T 3r24_A 94 TQLCQYLNTLTL--AVPYNMRVIHFGAGSDKGVAPGTAVLRQWLPTGTLLVDSDLNDFVS------------DAD--STL 157 (344)
T ss_dssp HHHHHHHTTSCC--CCCTTCEEEEESCCCTTSBCHHHHHHHHHSCTTCEEEEEESSCCBC------------SSS--EEE
T ss_pred HHHHHHhccccE--eecCCCEEEeCCCCCCCCCCCcHHHHHHhCCCCcEEEEeeCccccc------------CCC--eEE
Confidence 357777744210 0125889999998 456643222211112799999998541 112 348
Q ss_pred EcchhhHHHHHhhhcCCCCCeeEEEEcCCCC
Q 022298 212 TVRVETFLERAEQFVGKDGPFDYMSVTPPYT 242 (299)
Q Consensus 212 ~~D~~~~l~~~~~~~~~~~~fDlI~iDPPY~ 242 (299)
++|..+.. ...+||+|+.|.--+
T Consensus 158 qGD~~~~~--------~~~k~DLVISDMAPN 180 (344)
T 3r24_A 158 IGDCATVH--------TANKWDLIISDMYDP 180 (344)
T ss_dssp ESCGGGEE--------ESSCEEEEEECCCCT
T ss_pred Eccccccc--------cCCCCCEEEecCCCC
Confidence 99975532 247899999997433
No 322
>2g1p_A DNA adenine methylase; DAM methylation, GATC recognition, base flipping, bacterial factor, transferase-DNA complex; HET: DNA SAH; 1.89A {Escherichia coli} PDB: 2ore_D*
Probab=85.09 E-value=0.44 Score=43.28 Aligned_cols=33 Identities=15% Similarity=0.242 Sum_probs=25.6
Q ss_pred CCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHH
Q 022298 156 PGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVV 191 (299)
Q Consensus 156 ~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al 191 (299)
..+.+|+|+|+|++++... ..+++..|+|++.+
T Consensus 28 ~~~yvEpF~Ggg~V~~~~~---~~~~i~ND~n~~li 60 (278)
T 2g1p_A 28 GECLVEPFVGAGSVFLNTD---FSRYILADINSDLI 60 (278)
T ss_dssp CSEEEETTCTTCHHHHTCC---CSEEEEEESCHHHH
T ss_pred cCeEEeeccCccHHHHhhc---ccceEEEeccHHHH
Confidence 4689999999999987542 35788999998753
No 323
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=84.51 E-value=6.4 Score=35.58 Aligned_cols=85 Identities=15% Similarity=0.159 Sum_probs=54.6
Q ss_pred CCCCEEEEECCccchHHHH----HHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHH---Hhhhc
Q 022298 154 LRPGRWLDLYSGTGSVGIE----AISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLER---AEQFV 226 (299)
Q Consensus 154 ~~~~~VLDLfaGSGalgIE----AlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~---~~~~~ 226 (299)
+.+.++|=-||+ |.+|.+ ++.+|+ +|++++.+...+ +.+.+.++..+...++.++.+|+.+...- .....
T Consensus 6 l~~k~vlVTGas-~gIG~~la~~l~~~G~-~Vv~~~r~~~~~-~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~ 82 (319)
T 3ioy_A 6 FAGRTAFVTGGA-NGVGIGLVRQLLNQGC-KVAIADIRQDSI-DKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVE 82 (319)
T ss_dssp CTTCEEEEETTT-STHHHHHHHHHHHTTC-EEEEEESCHHHH-HHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEcCCc-hHHHHHHHHHHHHCCC-EEEEEECCHHHH-HHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence 456778877665 445544 446787 599999999887 77777776665433578888887653211 11111
Q ss_pred CCCCCeeEEEEcCCC
Q 022298 227 GKDGPFDYMSVTPPY 241 (299)
Q Consensus 227 ~~~~~fDlI~iDPPY 241 (299)
...+..|+++.+.-+
T Consensus 83 ~~~g~id~lv~nAg~ 97 (319)
T 3ioy_A 83 ARFGPVSILCNNAGV 97 (319)
T ss_dssp HHTCCEEEEEECCCC
T ss_pred HhCCCCCEEEECCCc
Confidence 123578999988743
No 324
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=84.40 E-value=3.4 Score=36.87 Aligned_cols=84 Identities=13% Similarity=0.055 Sum_probs=53.9
Q ss_pred CCCCEEEEECCccc---hHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHH---HhhhcC
Q 022298 154 LRPGRWLDLYSGTG---SVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLER---AEQFVG 227 (299)
Q Consensus 154 ~~~~~VLDLfaGSG---algIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~---~~~~~~ 227 (299)
++++++|=-|+++| +++..++..|+ +|+.+|.+.+.+ +-+.+.++..+. ++..+++|+.+...- ......
T Consensus 7 L~gKvalVTGas~GIG~aia~~la~~Ga-~Vvi~~~~~~~~-~~~~~~l~~~g~--~~~~~~~Dv~~~~~v~~~~~~~~~ 82 (255)
T 4g81_D 7 LTGKTALVTGSARGLGFAYAEGLAAAGA-RVILNDIRATLL-AESVDTLTRKGY--DAHGVAFDVTDELAIEAAFSKLDA 82 (255)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEECCSCHHHH-HHHHHHHHHTTC--CEEECCCCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHH-HHHHHHHHhcCC--cEEEEEeeCCCHHHHHHHHHHHHH
Confidence 57888887776665 23334456788 599999999887 666666666653 467778887543211 111122
Q ss_pred CCCCeeEEEEcCCC
Q 022298 228 KDGPFDYMSVTPPY 241 (299)
Q Consensus 228 ~~~~fDlI~iDPPY 241 (299)
..++.|+++-|--.
T Consensus 83 ~~G~iDiLVNNAG~ 96 (255)
T 4g81_D 83 EGIHVDILINNAGI 96 (255)
T ss_dssp TTCCCCEEEECCCC
T ss_pred HCCCCcEEEECCCC
Confidence 34689999987643
No 325
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=84.16 E-value=5.6 Score=34.69 Aligned_cols=84 Identities=15% Similarity=0.014 Sum_probs=52.3
Q ss_pred CCCCEEEEECCccchHHHH----HHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCC
Q 022298 154 LRPGRWLDLYSGTGSVGIE----AISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKD 229 (299)
Q Consensus 154 ~~~~~VLDLfaGSGalgIE----AlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~ 229 (299)
+.++++|=-|+ +|.+|.+ ++.+|+ +|+.++.+...+ +.+.+.+...+....+..+.+|+.+... ...+....
T Consensus 8 l~~k~~lVTGa-s~gIG~aia~~l~~~G~-~V~~~~r~~~~~-~~~~~~l~~~~~~~~~~~~~~D~~~~~~-~~~~~~~~ 83 (267)
T 3t4x_A 8 LKGKTALVTGS-TAGIGKAIATSLVAEGA-NVLINGRREENV-NETIKEIRAQYPDAILQPVVADLGTEQG-CQDVIEKY 83 (267)
T ss_dssp CTTCEEEETTC-SSHHHHHHHHHHHHTTC-EEEEEESSHHHH-HHHHHHHHHHCTTCEEEEEECCTTSHHH-HHHHHHHC
T ss_pred cCCCEEEEeCC-CcHHHHHHHHHHHHCCC-EEEEEeCCHHHH-HHHHHHHHhhCCCceEEEEecCCCCHHH-HHHHHHhc
Confidence 45677775554 5556654 345787 699999999886 6666666655433456778888764321 11111123
Q ss_pred CCeeEEEEcCCC
Q 022298 230 GPFDYMSVTPPY 241 (299)
Q Consensus 230 ~~fDlI~iDPPY 241 (299)
++.|+++.+.-.
T Consensus 84 g~id~lv~nAg~ 95 (267)
T 3t4x_A 84 PKVDILINNLGI 95 (267)
T ss_dssp CCCSEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 578999987643
No 326
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=83.54 E-value=5.3 Score=34.64 Aligned_cols=82 Identities=13% Similarity=0.075 Sum_probs=53.4
Q ss_pred CCCCEEEEECCccchHHHH----HHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHH---Hhhhc
Q 022298 154 LRPGRWLDLYSGTGSVGIE----AISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLER---AEQFV 226 (299)
Q Consensus 154 ~~~~~VLDLfaGSGalgIE----AlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~---~~~~~ 226 (299)
..++++|=-|+++ .+|.+ ++.+|+ +|+.++.+...+ +.+.+.++..+ .++.++.+|+.+...- .....
T Consensus 5 ~~~k~vlVTGas~-GIG~aia~~l~~~G~-~V~~~~r~~~~~-~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~ 79 (252)
T 3h7a_A 5 PRNATVAVIGAGD-YIGAEIAKKFAAEGF-TVFAGRRNGEKL-APLVAEIEAAG--GRIVARSLDARNEDEVTAFLNAAD 79 (252)
T ss_dssp CCSCEEEEECCSS-HHHHHHHHHHHHTTC-EEEEEESSGGGG-HHHHHHHHHTT--CEEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCc-hHHHHHHHHHHHCCC-EEEEEeCCHHHH-HHHHHHHHhcC--CeEEEEECcCCCHHHHHHHHHHHH
Confidence 4567777666654 45544 446787 699999999887 77777776654 3578888887643211 11111
Q ss_pred CCCCCeeEEEEcCCC
Q 022298 227 GKDGPFDYMSVTPPY 241 (299)
Q Consensus 227 ~~~~~fDlI~iDPPY 241 (299)
.. ++.|+++.+.-.
T Consensus 80 ~~-g~id~lv~nAg~ 93 (252)
T 3h7a_A 80 AH-APLEVTIFNVGA 93 (252)
T ss_dssp HH-SCEEEEEECCCC
T ss_pred hh-CCceEEEECCCc
Confidence 22 579999987654
No 327
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=83.40 E-value=5.4 Score=34.55 Aligned_cols=86 Identities=19% Similarity=0.142 Sum_probs=52.4
Q ss_pred CCCCEEEEECC-ccc---hHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHH---Hhhhc
Q 022298 154 LRPGRWLDLYS-GTG---SVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLER---AEQFV 226 (299)
Q Consensus 154 ~~~~~VLDLfa-GSG---algIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~---~~~~~ 226 (299)
+.++++|=.|+ |+| .+...++.+|+ +|+.++.+...+ +.+.+.++..+. .++.++.+|+.+...- .....
T Consensus 20 l~~k~vlITGasg~GIG~~~a~~l~~~G~-~V~~~~r~~~~~-~~~~~~l~~~~~-~~~~~~~~Dl~~~~~v~~~~~~~~ 96 (266)
T 3o38_A 20 LKGKVVLVTAAAGTGIGSTTARRALLEGA-DVVISDYHERRL-GETRDQLADLGL-GRVEAVVCDVTSTEAVDALITQTV 96 (266)
T ss_dssp TTTCEEEESSCSSSSHHHHHHHHHHHTTC-EEEEEESCHHHH-HHHHHHHHTTCS-SCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHHCCC-EEEEecCCHHHH-HHHHHHHHhcCC-CceEEEEeCCCCHHHHHHHHHHHH
Confidence 45777777665 443 23333456787 599999999886 666666654432 3588899987643211 11011
Q ss_pred CCCCCeeEEEEcCCCC
Q 022298 227 GKDGPFDYMSVTPPYT 242 (299)
Q Consensus 227 ~~~~~fDlI~iDPPY~ 242 (299)
...++.|+++.+.-+.
T Consensus 97 ~~~g~id~li~~Ag~~ 112 (266)
T 3o38_A 97 EKAGRLDVLVNNAGLG 112 (266)
T ss_dssp HHHSCCCEEEECCCCC
T ss_pred HHhCCCcEEEECCCcC
Confidence 1124789999887543
No 328
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=82.91 E-value=7.5 Score=35.52 Aligned_cols=73 Identities=10% Similarity=0.067 Sum_probs=43.7
Q ss_pred CCCEEEEECCccchHHHHHH----HcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcc---hhhHHHHHhhhcC
Q 022298 155 RPGRWLDLYSGTGSVGIEAI----SRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVR---VETFLERAEQFVG 227 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAl----SrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D---~~~~l~~~~~~~~ 227 (299)
.+.+||-.|| |.+|+.++ .+|+.+|+++|.+++.. +.++ .+|.. .++..+ ..++........
T Consensus 171 ~g~~VlV~Ga--G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~-~~a~----~lGa~---~vi~~~~~~~~~~~~~i~~~~- 239 (356)
T 1pl8_A 171 LGHKVLVCGA--GPIGMVTLLVAKAMGAAQVVVTDLSATRL-SKAK----EIGAD---LVLQISKESPQEIARKVEGQL- 239 (356)
T ss_dssp TTCEEEEECC--SHHHHHHHHHHHHTTCSEEEEEESCHHHH-HHHH----HTTCS---EEEECSSCCHHHHHHHHHHHH-
T ss_pred CCCEEEEECC--CHHHHHHHHHHHHcCCCEEEEECCCHHHH-HHHH----HhCCC---EEEcCcccccchHHHHHHHHh-
Confidence 5789999876 55665543 36887899999999876 6664 35653 233332 233332221111
Q ss_pred CCCCeeEEEEcC
Q 022298 228 KDGPFDYMSVTP 239 (299)
Q Consensus 228 ~~~~fDlI~iDP 239 (299)
...+|+||-.-
T Consensus 240 -~~g~D~vid~~ 250 (356)
T 1pl8_A 240 -GCKPEVTIECT 250 (356)
T ss_dssp -TSCCSEEEECS
T ss_pred -CCCCCEEEECC
Confidence 14689987544
No 329
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=82.29 E-value=11 Score=31.93 Aligned_cols=84 Identities=13% Similarity=0.082 Sum_probs=53.1
Q ss_pred CCCCEEEEECCccchHHHH----HHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHH---Hhhhc
Q 022298 154 LRPGRWLDLYSGTGSVGIE----AISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLER---AEQFV 226 (299)
Q Consensus 154 ~~~~~VLDLfaGSGalgIE----AlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~---~~~~~ 226 (299)
+.++++|=-| |+|.+|.+ ++++|+ +|+.++.++... +.+.+.++..+. ++.++.+|+.+...- .....
T Consensus 3 l~~k~vlITG-as~gIG~~~a~~l~~~G~-~v~~~~r~~~~~-~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~ 77 (247)
T 3lyl_A 3 LNEKVALVTG-ASRGIGFEVAHALASKGA-TVVGTATSQASA-EKFENSMKEKGF--KARGLVLNISDIESIQNFFAEIK 77 (247)
T ss_dssp TTTCEEEESS-CSSHHHHHHHHHHHHTTC-EEEEEESSHHHH-HHHHHHHHHTTC--CEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEEC-CCChHHHHHHHHHHHCCC-EEEEEeCCHHHH-HHHHHHHHhcCC--ceEEEEecCCCHHHHHHHHHHHH
Confidence 3466676555 55666654 345787 699999999886 666666666553 477888887643211 11111
Q ss_pred CCCCCeeEEEEcCCCC
Q 022298 227 GKDGPFDYMSVTPPYT 242 (299)
Q Consensus 227 ~~~~~fDlI~iDPPY~ 242 (299)
...++.|+++.+.-+.
T Consensus 78 ~~~~~id~li~~Ag~~ 93 (247)
T 3lyl_A 78 AENLAIDILVNNAGIT 93 (247)
T ss_dssp HTTCCCSEEEECCCCC
T ss_pred HHcCCCCEEEECCCCC
Confidence 2345789999887543
No 330
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=82.29 E-value=8.8 Score=33.37 Aligned_cols=85 Identities=13% Similarity=-0.010 Sum_probs=52.7
Q ss_pred CCCCEEEEECCccchHHHH----HHHcCCCEEEEEeCCHHHHHHHHHHHHHH-hCCCCcEEEEEcchhhHHHHH---hhh
Q 022298 154 LRPGRWLDLYSGTGSVGIE----AISRGCSEVHFVEMDPWVVSNVLIPNLEW-TGFLDVSSIHTVRVETFLERA---EQF 225 (299)
Q Consensus 154 ~~~~~VLDLfaGSGalgIE----AlSrGa~~V~~VD~n~~Al~~~a~~N~~~-~g~~~~~~vi~~D~~~~l~~~---~~~ 225 (299)
+.++++|=-|+++ .+|.+ ++.+|+ +|+.++.+...+ +.+.+.++. .+- .++.++.+|+.+...-. ...
T Consensus 6 l~~k~~lVTGas~-GIG~aia~~l~~~G~-~V~~~~r~~~~~-~~~~~~l~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~ 81 (265)
T 3lf2_A 6 LSEAVAVVTGGSS-GIGLATVELLLEAGA-AVAFCARDGERL-RAAESALRQRFPG-ARLFASVCDVLDALQVRAFAEAC 81 (265)
T ss_dssp CTTCEEEEETCSS-HHHHHHHHHHHHTTC-EEEEEESCHHHH-HHHHHHHHHHSTT-CCEEEEECCTTCHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCC-hHHHHHHHHHHHCCC-EEEEEeCCHHHH-HHHHHHHHHhcCC-ceEEEEeCCCCCHHHHHHHHHHH
Confidence 5677888776654 45544 445787 599999999887 666666655 332 23778888876532110 001
Q ss_pred cCCCCCeeEEEEcCCCC
Q 022298 226 VGKDGPFDYMSVTPPYT 242 (299)
Q Consensus 226 ~~~~~~fDlI~iDPPY~ 242 (299)
....++.|+++.+.-+.
T Consensus 82 ~~~~g~id~lvnnAg~~ 98 (265)
T 3lf2_A 82 ERTLGCASILVNNAGQG 98 (265)
T ss_dssp HHHHCSCSEEEECCCCC
T ss_pred HHHcCCCCEEEECCCCC
Confidence 11125789999887543
No 331
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=82.23 E-value=10 Score=32.98 Aligned_cols=81 Identities=10% Similarity=0.039 Sum_probs=52.7
Q ss_pred CCCCEEEEECCccchHHHH----HHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHH---Hhhhc
Q 022298 154 LRPGRWLDLYSGTGSVGIE----AISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLER---AEQFV 226 (299)
Q Consensus 154 ~~~~~VLDLfaGSGalgIE----AlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~---~~~~~ 226 (299)
+.++++|=-|+++| +|.+ ++.+|+ +|+.++.+.+.+ +.+.+.++..+ .++.++.+|+.+...- .....
T Consensus 9 l~~k~vlVTGas~g-IG~aia~~l~~~G~-~V~~~~r~~~~~-~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~ 83 (264)
T 3ucx_A 9 LTDKVVVISGVGPA-LGTTLARRCAEQGA-DLVLAARTVERL-EDVAKQVTDTG--RRALSVGTDITDDAQVAHLVDETM 83 (264)
T ss_dssp TTTCEEEEESCCTT-HHHHHHHHHHHTTC-EEEEEESCHHHH-HHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHH
T ss_pred cCCcEEEEECCCcH-HHHHHHHHHHHCcC-EEEEEeCCHHHH-HHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHH
Confidence 45778887776554 4543 456787 599999999887 77777776654 3477888887654211 11111
Q ss_pred CCCCCeeEEEEcC
Q 022298 227 GKDGPFDYMSVTP 239 (299)
Q Consensus 227 ~~~~~fDlI~iDP 239 (299)
...++.|+++.+.
T Consensus 84 ~~~g~id~lv~nA 96 (264)
T 3ucx_A 84 KAYGRVDVVINNA 96 (264)
T ss_dssp HHTSCCSEEEECC
T ss_pred HHcCCCcEEEECC
Confidence 1235789999886
No 332
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=81.66 E-value=2.1 Score=39.15 Aligned_cols=72 Identities=13% Similarity=0.143 Sum_probs=42.1
Q ss_pred CCCEEEEECCccchHHHHHH----HcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCC
Q 022298 155 RPGRWLDLYSGTGSVGIEAI----SRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDG 230 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAl----SrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~ 230 (299)
.+.+||=.|| |.+|+.++ .+|+.+|+++|.+++.. +.+++ +|.. .++..+-.++......+. .+.
T Consensus 166 ~g~~VlV~Ga--G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~-~~~~~----lGa~---~vi~~~~~~~~~~v~~~t-~g~ 234 (352)
T 3fpc_A 166 LGDTVCVIGI--GPVGLMSVAGANHLGAGRIFAVGSRKHCC-DIALE----YGAT---DIINYKNGDIVEQILKAT-DGK 234 (352)
T ss_dssp TTCCEEEECC--SHHHHHHHHHHHTTTCSSEEEECCCHHHH-HHHHH----HTCC---EEECGGGSCHHHHHHHHT-TTC
T ss_pred CCCEEEEECC--CHHHHHHHHHHHHcCCcEEEEECCCHHHH-HHHHH----hCCc---eEEcCCCcCHHHHHHHHc-CCC
Confidence 5788888865 66666544 25887799999999876 66644 5653 233322222222221111 234
Q ss_pred CeeEEEE
Q 022298 231 PFDYMSV 237 (299)
Q Consensus 231 ~fDlI~i 237 (299)
.+|+||-
T Consensus 235 g~D~v~d 241 (352)
T 3fpc_A 235 GVDKVVI 241 (352)
T ss_dssp CEEEEEE
T ss_pred CCCEEEE
Confidence 6999874
No 333
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=81.56 E-value=7.2 Score=34.21 Aligned_cols=84 Identities=14% Similarity=0.142 Sum_probs=52.9
Q ss_pred CCCCEEEEECCccchHHHH----HHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCC-CcEEEEEcchhhHHHH---Hhhh
Q 022298 154 LRPGRWLDLYSGTGSVGIE----AISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFL-DVSSIHTVRVETFLER---AEQF 225 (299)
Q Consensus 154 ~~~~~VLDLfaGSGalgIE----AlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~-~~~~vi~~D~~~~l~~---~~~~ 225 (299)
+.++++|=-|++ |.+|.+ ++.+|+ +|+.++.++..+ +.+.+.++..+.. .++.++.+|+.+...- ....
T Consensus 9 l~~k~vlVTGas-~gIG~aia~~l~~~G~-~V~~~~r~~~~~-~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 85 (281)
T 3svt_A 9 FQDRTYLVTGGG-SGIGKGVAAGLVAAGA-SVMIVGRNPDKL-AGAVQELEALGANGGAIRYEPTDITNEDETARAVDAV 85 (281)
T ss_dssp CTTCEEEEETTT-SHHHHHHHHHHHHTTC-EEEEEESCHHHH-HHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHH
T ss_pred cCCCEEEEeCCC-cHHHHHHHHHHHHCCC-EEEEEeCCHHHH-HHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHH
Confidence 467788877664 455544 446787 699999999887 6676777665432 2577888887643211 1101
Q ss_pred cCCCCCeeEEEEcCC
Q 022298 226 VGKDGPFDYMSVTPP 240 (299)
Q Consensus 226 ~~~~~~fDlI~iDPP 240 (299)
....++.|+++.+.-
T Consensus 86 ~~~~g~id~lv~nAg 100 (281)
T 3svt_A 86 TAWHGRLHGVVHCAG 100 (281)
T ss_dssp HHHHSCCCEEEECCC
T ss_pred HHHcCCCCEEEECCC
Confidence 111247899998764
No 334
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=81.55 E-value=7 Score=33.89 Aligned_cols=83 Identities=10% Similarity=0.040 Sum_probs=52.2
Q ss_pred CCCCEEEEECCccchHHHH----HHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHH---hhhc
Q 022298 154 LRPGRWLDLYSGTGSVGIE----AISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERA---EQFV 226 (299)
Q Consensus 154 ~~~~~VLDLfaGSGalgIE----AlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~---~~~~ 226 (299)
+.++++|=-|++ |.+|.+ ++.+|+ +|+.++.+.+.+ +.+.+.++..+ .++.++.+|+.+...-. ....
T Consensus 10 l~~k~vlVTGas-~gIG~~ia~~l~~~G~-~V~~~~r~~~~~-~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~ 84 (256)
T 3gaf_A 10 LNDAVAIVTGAA-AGIGRAIAGTFAKAGA-SVVVTDLKSEGA-EAVAAAIRQAG--GKAIGLECNVTDEQHREAVIKAAL 84 (256)
T ss_dssp CTTCEEEECSCS-SHHHHHHHHHHHHHTC-EEEEEESSHHHH-HHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEECCC-CHHHHHHHHHHHHCCC-EEEEEeCCHHHH-HHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHH
Confidence 567777766554 555654 345788 599999999887 67777776655 34778888876532110 0011
Q ss_pred CCCCCeeEEEEcCCC
Q 022298 227 GKDGPFDYMSVTPPY 241 (299)
Q Consensus 227 ~~~~~fDlI~iDPPY 241 (299)
...++.|+++.+.-.
T Consensus 85 ~~~g~id~lv~nAg~ 99 (256)
T 3gaf_A 85 DQFGKITVLVNNAGG 99 (256)
T ss_dssp HHHSCCCEEEECCCC
T ss_pred HHcCCCCEEEECCCC
Confidence 112478999987643
No 335
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=81.43 E-value=7.6 Score=34.66 Aligned_cols=84 Identities=13% Similarity=0.112 Sum_probs=53.5
Q ss_pred CCCCEEEEECCccchHHHH----HHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHH---hhhc
Q 022298 154 LRPGRWLDLYSGTGSVGIE----AISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERA---EQFV 226 (299)
Q Consensus 154 ~~~~~VLDLfaGSGalgIE----AlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~---~~~~ 226 (299)
+.++++|=-||+ |.+|.+ ++++|+ +|+.++.+...+ +.+.+.++..+. ++.++.+|+.+...-. ....
T Consensus 29 l~gk~vlVTGas-~gIG~~la~~l~~~G~-~V~~~~r~~~~~-~~~~~~l~~~~~--~~~~~~~Dv~d~~~v~~~~~~~~ 103 (301)
T 3tjr_A 29 FDGRAAVVTGGA-SGIGLATATEFARRGA-RLVLSDVDQPAL-EQAVNGLRGQGF--DAHGVVCDVRHLDEMVRLADEAF 103 (301)
T ss_dssp STTCEEEEETTT-SHHHHHHHHHHHHTTC-EEEEEESCHHHH-HHHHHHHHHTTC--CEEEEECCTTCHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCC-CHHHHHHHHHHHHCCC-EEEEEECCHHHH-HHHHHHHHhcCC--ceEEEEccCCCHHHHHHHHHHHH
Confidence 457788866665 455654 446787 699999999887 677666665543 4778888876542111 1011
Q ss_pred CCCCCeeEEEEcCCCC
Q 022298 227 GKDGPFDYMSVTPPYT 242 (299)
Q Consensus 227 ~~~~~fDlI~iDPPY~ 242 (299)
...+..|+++.+.-+.
T Consensus 104 ~~~g~id~lvnnAg~~ 119 (301)
T 3tjr_A 104 RLLGGVDVVFSNAGIV 119 (301)
T ss_dssp HHHSSCSEEEECCCCC
T ss_pred HhCCCCCEEEECCCcC
Confidence 1124789999886543
No 336
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=81.37 E-value=7.9 Score=33.50 Aligned_cols=85 Identities=8% Similarity=0.069 Sum_probs=52.2
Q ss_pred CCCCEEEEECCccchHHHH----HHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCC-CcEEEEEcchhhHHHHH---hhh
Q 022298 154 LRPGRWLDLYSGTGSVGIE----AISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFL-DVSSIHTVRVETFLERA---EQF 225 (299)
Q Consensus 154 ~~~~~VLDLfaGSGalgIE----AlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~-~~~~vi~~D~~~~l~~~---~~~ 225 (299)
..++++|=-|++ |.+|.+ ++.+|+ +|+.++.+...+ +.+.+.+...... .++.++.+|+.+...-. ...
T Consensus 5 ~~~k~~lVTGas-~GIG~aia~~l~~~G~-~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 81 (250)
T 3nyw_A 5 KQKGLAIITGAS-QGIGAVIAAGLATDGY-RVVLIARSKQNL-EKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDI 81 (250)
T ss_dssp CCCCEEEEESTT-SHHHHHHHHHHHHHTC-EEEEEESCHHHH-HHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCEEEEECCC-cHHHHHHHHHHHHCCC-EEEEEECCHHHH-HHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHH
Confidence 456777766655 455554 345788 699999999887 6666666554222 34678888876532111 101
Q ss_pred cCCCCCeeEEEEcCCC
Q 022298 226 VGKDGPFDYMSVTPPY 241 (299)
Q Consensus 226 ~~~~~~fDlI~iDPPY 241 (299)
....++.|+++.+.-.
T Consensus 82 ~~~~g~iD~lvnnAg~ 97 (250)
T 3nyw_A 82 HQKYGAVDILVNAAAM 97 (250)
T ss_dssp HHHHCCEEEEEECCCC
T ss_pred HHhcCCCCEEEECCCc
Confidence 1112579999987654
No 337
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=81.29 E-value=9 Score=32.76 Aligned_cols=83 Identities=13% Similarity=0.148 Sum_probs=52.6
Q ss_pred CCCCEEEEECCccchHHHH----HHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHH---hhhc
Q 022298 154 LRPGRWLDLYSGTGSVGIE----AISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERA---EQFV 226 (299)
Q Consensus 154 ~~~~~VLDLfaGSGalgIE----AlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~---~~~~ 226 (299)
+.++++|=-|+ +|.+|.+ ++.+|+ +|+.++.+.+.+ +.+.+.++..+ .++.++.+|+.+...-. ....
T Consensus 7 ~~~k~vlITGa-s~giG~~~a~~l~~~G~-~V~~~~r~~~~~-~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~ 81 (253)
T 3qiv_A 7 FENKVGIVTGS-GGGIGQAYAEALAREGA-AVVVADINAEAA-EAVAKQIVADG--GTAISVAVDVSDPESAKAMADRTL 81 (253)
T ss_dssp TTTCEEEEETT-TSHHHHHHHHHHHHTTC-EEEEEESCHHHH-HHHHHHHHHTT--CEEEEEECCTTSHHHHHHHHHHHH
T ss_pred cCCCEEEEECC-CChHHHHHHHHHHHCCC-EEEEEcCCHHHH-HHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHH
Confidence 45777876665 5555654 345787 599999999887 67767666554 35778888876542111 0011
Q ss_pred CCCCCeeEEEEcCCC
Q 022298 227 GKDGPFDYMSVTPPY 241 (299)
Q Consensus 227 ~~~~~fDlI~iDPPY 241 (299)
...+..|+++.+.-.
T Consensus 82 ~~~g~id~li~~Ag~ 96 (253)
T 3qiv_A 82 AEFGGIDYLVNNAAI 96 (253)
T ss_dssp HHHSCCCEEEECCCC
T ss_pred HHcCCCCEEEECCCc
Confidence 112478999988643
No 338
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=80.75 E-value=1.9 Score=40.00 Aligned_cols=44 Identities=14% Similarity=0.083 Sum_probs=32.2
Q ss_pred CCCEEEEECCccchHHHHHH----HcCCCEEEEEeCCHHHHHHHHHHHHHHhCCC
Q 022298 155 RPGRWLDLYSGTGSVGIEAI----SRGCSEVHFVEMDPWVVSNVLIPNLEWTGFL 205 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAl----SrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~ 205 (299)
.+.+||=.|| |.+|+.++ .+|+.+|+++|.+++.. +.+++ +|..
T Consensus 182 ~g~~VlV~Ga--G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~-~~a~~----lGa~ 229 (370)
T 4ej6_A 182 AGSTVAILGG--GVIGLLTVQLARLAGATTVILSTRQATKR-RLAEE----VGAT 229 (370)
T ss_dssp TTCEEEEECC--SHHHHHHHHHHHHTTCSEEEEECSCHHHH-HHHHH----HTCS
T ss_pred CCCEEEEECC--CHHHHHHHHHHHHcCCCEEEEECCCHHHH-HHHHH----cCCC
Confidence 5788988876 56666544 36988899999999886 66654 5653
No 339
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=80.72 E-value=6.7 Score=34.24 Aligned_cols=87 Identities=15% Similarity=0.042 Sum_probs=55.3
Q ss_pred CCCCCEEEEECCcc--c---hHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHH---Hhh
Q 022298 153 SLRPGRWLDLYSGT--G---SVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLER---AEQ 224 (299)
Q Consensus 153 ~~~~~~VLDLfaGS--G---algIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~---~~~ 224 (299)
+++++++|=-||++ | +++..++..|+ +|+.++.+.+.+ +-+.+-++..+-. ++.++++|+.+...- ...
T Consensus 3 ~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga-~Vvi~~r~~~~~-~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~ 79 (256)
T 4fs3_A 3 NLENKTYVIMGIANKRSIAFGVAKVLDQLGA-KLVFTYRKERSR-KELEKLLEQLNQP-EAHLYQIDVQSDEEVINGFEQ 79 (256)
T ss_dssp CCTTCEEEEECCCSTTCHHHHHHHHHHHTTC-EEEEEESSGGGH-HHHHHHHGGGTCS-SCEEEECCTTCHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHHHCCC-EEEEEECCHHHH-HHHHHHHHhcCCC-cEEEEEccCCCHHHHHHHHHH
Confidence 36789999888644 3 33444556798 599999998887 6777666665532 467788887543211 011
Q ss_pred hcCCCCCeeEEEEcCCCC
Q 022298 225 FVGKDGPFDYMSVTPPYT 242 (299)
Q Consensus 225 ~~~~~~~fDlI~iDPPY~ 242 (299)
.....++.|+++.|--+.
T Consensus 80 ~~~~~G~iD~lvnnAg~~ 97 (256)
T 4fs3_A 80 IGKDVGNIDGVYHSIAFA 97 (256)
T ss_dssp HHHHHCCCSEEEECCCCC
T ss_pred HHHHhCCCCEEEeccccc
Confidence 111236789999876543
No 340
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=80.71 E-value=6.5 Score=35.41 Aligned_cols=80 Identities=15% Similarity=0.084 Sum_probs=49.6
Q ss_pred CCCCEEEEECCccc---hHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHH---hhhcC
Q 022298 154 LRPGRWLDLYSGTG---SVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERA---EQFVG 227 (299)
Q Consensus 154 ~~~~~VLDLfaGSG---algIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~---~~~~~ 227 (299)
++++.+|=-|+++| +++..++..|+ +|+.+|.+.+.+ +-+. +.++- ++..+++|+.+...-. .....
T Consensus 27 L~gKvalVTGas~GIG~aiA~~la~~Ga-~V~i~~r~~~~l-~~~~---~~~g~--~~~~~~~Dv~~~~~v~~~~~~~~~ 99 (273)
T 4fgs_A 27 LNAKIAVITGATSGIGLAAAKRFVAEGA-RVFITGRRKDVL-DAAI---AEIGG--GAVGIQADSANLAELDRLYEKVKA 99 (273)
T ss_dssp TTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHH-HHHH---HHHCT--TCEEEECCTTCHHHHHHHHHHHHH
T ss_pred hCCCEEEEeCcCCHHHHHHHHHHHHCCC-EEEEEECCHHHH-HHHH---HHcCC--CeEEEEecCCCHHHHHHHHHHHHH
Confidence 57888888888776 33344456788 699999999876 5443 33442 3567788875432110 11111
Q ss_pred CCCCeeEEEEcCC
Q 022298 228 KDGPFDYMSVTPP 240 (299)
Q Consensus 228 ~~~~fDlI~iDPP 240 (299)
..++.|+++.|--
T Consensus 100 ~~G~iDiLVNNAG 112 (273)
T 4fgs_A 100 EAGRIDVLFVNAG 112 (273)
T ss_dssp HHSCEEEEEECCC
T ss_pred HcCCCCEEEECCC
Confidence 2367999998763
No 341
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=80.38 E-value=4.5 Score=36.70 Aligned_cols=73 Identities=18% Similarity=0.050 Sum_probs=42.3
Q ss_pred CCCEEEEECCcc-chHHHHHHH-cCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCe
Q 022298 155 RPGRWLDLYSGT-GSVGIEAIS-RGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPF 232 (299)
Q Consensus 155 ~~~~VLDLfaGS-GalgIEAlS-rGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~f 232 (299)
.+.+||-.|||. |.+.+.++. +|+ +|+++|.+++.. +.+++ +|.. .++..+-.++...... ..+.+
T Consensus 166 ~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~-~~~~~----lGa~---~~i~~~~~~~~~~~~~---~~g~~ 233 (340)
T 3s2e_A 166 PGQWVVISGIGGLGHVAVQYARAMGL-RVAAVDIDDAKL-NLARR----LGAE---VAVNARDTDPAAWLQK---EIGGA 233 (340)
T ss_dssp TTSEEEEECCSTTHHHHHHHHHHTTC-EEEEEESCHHHH-HHHHH----TTCS---EEEETTTSCHHHHHHH---HHSSE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEeCCHHHH-HHHHH----cCCC---EEEeCCCcCHHHHHHH---hCCCC
Confidence 578898887643 444444443 688 799999999886 66543 6653 2333221222222111 02478
Q ss_pred eEEEEcC
Q 022298 233 DYMSVTP 239 (299)
Q Consensus 233 DlI~iDP 239 (299)
|+||-+-
T Consensus 234 d~vid~~ 240 (340)
T 3s2e_A 234 HGVLVTA 240 (340)
T ss_dssp EEEEESS
T ss_pred CEEEEeC
Confidence 9988664
No 342
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=80.09 E-value=6.6 Score=34.70 Aligned_cols=83 Identities=12% Similarity=0.106 Sum_probs=49.7
Q ss_pred CCCCEEEEECCccchHHHH----HHHcCCCEEEEEeC-CHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHH--H-Hhhh
Q 022298 154 LRPGRWLDLYSGTGSVGIE----AISRGCSEVHFVEM-DPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLE--R-AEQF 225 (299)
Q Consensus 154 ~~~~~VLDLfaGSGalgIE----AlSrGa~~V~~VD~-n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~--~-~~~~ 225 (299)
..++++|=-|+++ .+|.+ ++.+|+ +|+.++. +.+.+ +.+.+.++..+ .++.++.+|+.+... . ....
T Consensus 27 ~~~k~~lVTGas~-GIG~aia~~la~~G~-~V~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~ 101 (280)
T 4da9_A 27 KARPVAIVTGGRR-GIGLGIARALAASGF-DIAITGIGDAEGV-APVIAELSGLG--ARVIFLRADLADLSSHQATVDAV 101 (280)
T ss_dssp CCCCEEEEETTTS-HHHHHHHHHHHHTTC-EEEEEESCCHHHH-HHHHHHHHHTT--CCEEEEECCTTSGGGHHHHHHHH
T ss_pred cCCCEEEEecCCC-HHHHHHHHHHHHCCC-eEEEEeCCCHHHH-HHHHHHHHhcC--CcEEEEEecCCCHHHHHHHHHHH
Confidence 4567777666554 45544 446787 5999995 77765 66666666554 347888888764321 1 1101
Q ss_pred cCCCCCeeEEEEcCCC
Q 022298 226 VGKDGPFDYMSVTPPY 241 (299)
Q Consensus 226 ~~~~~~fDlI~iDPPY 241 (299)
....++.|+++.+.-.
T Consensus 102 ~~~~g~iD~lvnnAg~ 117 (280)
T 4da9_A 102 VAEFGRIDCLVNNAGI 117 (280)
T ss_dssp HHHHSCCCEEEEECC-
T ss_pred HHHcCCCCEEEECCCc
Confidence 1112478999987643
No 343
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=79.98 E-value=12 Score=32.67 Aligned_cols=84 Identities=11% Similarity=0.036 Sum_probs=52.5
Q ss_pred CCCEEEEECCccchHHHHH----HHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHH--HH-hhhcC
Q 022298 155 RPGRWLDLYSGTGSVGIEA----ISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLE--RA-EQFVG 227 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEA----lSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~--~~-~~~~~ 227 (299)
.++++|=.| |+|.+|.+. +.+|+ +|++++.++..+ +.+.+.++..+...++.++.+|+.+... .. .....
T Consensus 31 ~~k~vlVTG-asggIG~~la~~l~~~G~-~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 107 (279)
T 1xg5_A 31 RDRLALVTG-ASGGIGAAVARALVQQGL-KVVGCARTVGNI-EELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRS 107 (279)
T ss_dssp TTCEEEEES-TTSHHHHHHHHHHHHTTC-EEEEEESCHHHH-HHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEEC-CCchHHHHHHHHHHHCCC-EEEEEECChHHH-HHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHH
Confidence 456677554 566777654 35687 699999998876 6666666666654557788888764321 11 00001
Q ss_pred CCCCeeEEEEcCCC
Q 022298 228 KDGPFDYMSVTPPY 241 (299)
Q Consensus 228 ~~~~fDlI~iDPPY 241 (299)
..+.+|+||.+.-+
T Consensus 108 ~~g~iD~vi~~Ag~ 121 (279)
T 1xg5_A 108 QHSGVDICINNAGL 121 (279)
T ss_dssp HHCCCSEEEECCCC
T ss_pred hCCCCCEEEECCCC
Confidence 12468999987643
No 344
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=79.55 E-value=11 Score=32.43 Aligned_cols=84 Identities=10% Similarity=-0.012 Sum_probs=50.1
Q ss_pred CCCCEEEEECCccchHHHH----HHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcch--hhH--HHHH-hh
Q 022298 154 LRPGRWLDLYSGTGSVGIE----AISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRV--ETF--LERA-EQ 224 (299)
Q Consensus 154 ~~~~~VLDLfaGSGalgIE----AlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~--~~~--l~~~-~~ 224 (299)
+.++++|=-|++ |.+|.+ ++.+|+ +|+.++.+...+ +.+.+.+...+. .++.++..|+ .+. .... ..
T Consensus 10 l~~k~vlVTGas-~gIG~aia~~l~~~G~-~V~~~~r~~~~~-~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~ 85 (252)
T 3f1l_A 10 LNDRIILVTGAS-DGIGREAAMTYARYGA-TVILLGRNEEKL-RQVASHINEETG-RQPQWFILDLLTCTSENCQQLAQR 85 (252)
T ss_dssp TTTCEEEEESTT-SHHHHHHHHHHHHTTC-EEEEEESCHHHH-HHHHHHHHHHHS-CCCEEEECCTTTCCHHHHHHHHHH
T ss_pred cCCCEEEEeCCC-ChHHHHHHHHHHHCCC-EEEEEeCCHHHH-HHHHHHHHhhcC-CCceEEEEecccCCHHHHHHHHHH
Confidence 457777766654 555554 446788 699999999886 666665554432 2356778887 222 1111 11
Q ss_pred hcCCCCCeeEEEEcCCC
Q 022298 225 FVGKDGPFDYMSVTPPY 241 (299)
Q Consensus 225 ~~~~~~~fDlI~iDPPY 241 (299)
.....++.|+++.+.-.
T Consensus 86 ~~~~~g~id~lv~nAg~ 102 (252)
T 3f1l_A 86 IAVNYPRLDGVLHNAGL 102 (252)
T ss_dssp HHHHCSCCSEEEECCCC
T ss_pred HHHhCCCCCEEEECCcc
Confidence 11123578999987643
No 345
>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}
Probab=79.36 E-value=1.7 Score=40.45 Aligned_cols=45 Identities=11% Similarity=0.036 Sum_probs=34.6
Q ss_pred CCCEEEEECCccchHHHHHH----HcCCCEEEEEeCCHHHHHHHHHHHHHHhCCC
Q 022298 155 RPGRWLDLYSGTGSVGIEAI----SRGCSEVHFVEMDPWVVSNVLIPNLEWTGFL 205 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAl----SrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~ 205 (299)
.+.+||=.++|+|.+|+.++ .+|+ +|++++.+++.+ +.+++ +|..
T Consensus 170 ~g~~vlV~gag~G~vG~~a~q~a~~~Ga-~Vi~~~~~~~~~-~~~~~----lGa~ 218 (379)
T 3iup_A 170 EGHSALVHTAAASNLGQMLNQICLKDGI-KLVNIVRKQEQA-DLLKA----QGAV 218 (379)
T ss_dssp TTCSCEEESSTTSHHHHHHHHHHHHHTC-CEEEEESSHHHH-HHHHH----TTCS
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHH-HHHHh----CCCc
Confidence 46788888888998887764 3688 599999999886 77654 6754
No 346
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=79.34 E-value=15 Score=26.83 Aligned_cols=73 Identities=16% Similarity=0.087 Sum_probs=45.2
Q ss_pred CCEEEEECCccchHHHHHH----HcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCC
Q 022298 156 PGRWLDLYSGTGSVGIEAI----SRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGP 231 (299)
Q Consensus 156 ~~~VLDLfaGSGalgIEAl----SrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~ 231 (299)
..+++=+|+ |.+|..++ .+|..+|+.+|.++..+ +.+. .. .+.++..|+.+...... . -..
T Consensus 5 ~~~v~I~G~--G~iG~~~~~~l~~~g~~~v~~~~r~~~~~-~~~~----~~----~~~~~~~d~~~~~~~~~-~---~~~ 69 (118)
T 3ic5_A 5 RWNICVVGA--GKIGQMIAALLKTSSNYSVTVADHDLAAL-AVLN----RM----GVATKQVDAKDEAGLAK-A---LGG 69 (118)
T ss_dssp CEEEEEECC--SHHHHHHHHHHHHCSSEEEEEEESCHHHH-HHHH----TT----TCEEEECCTTCHHHHHH-H---TTT
T ss_pred cCeEEEECC--CHHHHHHHHHHHhCCCceEEEEeCCHHHH-HHHH----hC----CCcEEEecCCCHHHHHH-H---HcC
Confidence 457777766 77776543 46745799999999876 5443 12 24566777654321111 1 146
Q ss_pred eeEEEEcCCCCC
Q 022298 232 FDYMSVTPPYTA 243 (299)
Q Consensus 232 fDlI~iDPPY~~ 243 (299)
+|+||...|+..
T Consensus 70 ~d~vi~~~~~~~ 81 (118)
T 3ic5_A 70 FDAVISAAPFFL 81 (118)
T ss_dssp CSEEEECSCGGG
T ss_pred CCEEEECCCchh
Confidence 899998888653
No 347
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=79.20 E-value=7.6 Score=33.78 Aligned_cols=83 Identities=13% Similarity=0.052 Sum_probs=51.7
Q ss_pred CCCCEEEEECCccchHHHH----HHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHH---hhhc
Q 022298 154 LRPGRWLDLYSGTGSVGIE----AISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERA---EQFV 226 (299)
Q Consensus 154 ~~~~~VLDLfaGSGalgIE----AlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~---~~~~ 226 (299)
+.++++|=-|+ +|.+|.+ ++.+|+ +|+.++.+.+.+ +.+.+.++..+. .++.++.+|+.+...-. ....
T Consensus 8 l~~k~vlVTGa-s~gIG~aia~~l~~~G~-~V~~~~r~~~~~-~~~~~~l~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~ 83 (262)
T 3pk0_A 8 LQGRSVVVTGG-TKGIGRGIATVFARAGA-NVAVAGRSTADI-DACVADLDQLGS-GKVIGVQTDVSDRAQCDALAGRAV 83 (262)
T ss_dssp CTTCEEEETTC-SSHHHHHHHHHHHHTTC-EEEEEESCHHHH-HHHHHHHHTTSS-SCEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCEEEEECC-CcHHHHHHHHHHHHCCC-EEEEEeCCHHHH-HHHHHHHHhhCC-CcEEEEEcCCCCHHHHHHHHHHHH
Confidence 45677775554 5556655 345787 699999999887 666666665542 35788888876532111 0011
Q ss_pred CCCCCeeEEEEcCC
Q 022298 227 GKDGPFDYMSVTPP 240 (299)
Q Consensus 227 ~~~~~fDlI~iDPP 240 (299)
...++.|+++.+.=
T Consensus 84 ~~~g~id~lvnnAg 97 (262)
T 3pk0_A 84 EEFGGIDVVCANAG 97 (262)
T ss_dssp HHHSCCSEEEECCC
T ss_pred HHhCCCCEEEECCC
Confidence 11247899998764
No 348
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=79.06 E-value=12 Score=32.43 Aligned_cols=84 Identities=10% Similarity=-0.044 Sum_probs=50.1
Q ss_pred CCCCEEEEECCccchHHHHH----HHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHH--HH-hhhc
Q 022298 154 LRPGRWLDLYSGTGSVGIEA----ISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLE--RA-EQFV 226 (299)
Q Consensus 154 ~~~~~VLDLfaGSGalgIEA----lSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~--~~-~~~~ 226 (299)
+.++++|=.|+ +|.+|.+. +.+|+ +|+.++.+++.+ +.+.+.+.......++.++.+|+.+... .. ....
T Consensus 11 l~~k~vlVTGa-s~gIG~~ia~~l~~~G~-~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~ 87 (267)
T 1iy8_A 11 FTDRVVLITGG-GSGLGRATAVRLAAEGA-KLSLVDVSSEGL-EASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATT 87 (267)
T ss_dssp CTTCEEEEETT-TSHHHHHHHHHHHHTTC-EEEEEESCHHHH-HHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCEEEEECC-CCHHHHHHHHHHHHCCC-EEEEEeCCHHHH-HHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHH
Confidence 45677776665 55666553 45787 699999998876 6565555544112347788888764321 11 1011
Q ss_pred CCCCCeeEEEEcCC
Q 022298 227 GKDGPFDYMSVTPP 240 (299)
Q Consensus 227 ~~~~~fDlI~iDPP 240 (299)
...++.|+++.+.=
T Consensus 88 ~~~g~id~lv~nAg 101 (267)
T 1iy8_A 88 ERFGRIDGFFNNAG 101 (267)
T ss_dssp HHHSCCSEEEECCC
T ss_pred HHcCCCCEEEECCC
Confidence 11247899998753
No 349
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=78.83 E-value=11 Score=31.95 Aligned_cols=84 Identities=15% Similarity=0.097 Sum_probs=50.4
Q ss_pred CCCCEEEEECCccchHHHHH----HHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcch--hhH---HHHHhh
Q 022298 154 LRPGRWLDLYSGTGSVGIEA----ISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRV--ETF---LERAEQ 224 (299)
Q Consensus 154 ~~~~~VLDLfaGSGalgIEA----lSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~--~~~---l~~~~~ 224 (299)
+.++++|=-| |+|.+|.+. +++|+ +|+.++.++..+ +.+.+.++..+.. ...++..|+ .+. ......
T Consensus 12 l~~k~vlITG-as~gIG~~ia~~l~~~G~-~V~~~~r~~~~~-~~~~~~~~~~~~~-~~~~~~~d~d~~~~~~~~~~~~~ 87 (247)
T 3i1j_A 12 LKGRVILVTG-AARGIGAAAARAYAAHGA-SVVLLGRTEASL-AEVSDQIKSAGQP-QPLIIALNLENATAQQYRELAAR 87 (247)
T ss_dssp TTTCEEEESS-TTSHHHHHHHHHHHHTTC-EEEEEESCHHHH-HHHHHHHHHTTSC-CCEEEECCTTTCCHHHHHHHHHH
T ss_pred CCCCEEEEeC-CCChHHHHHHHHHHHCCC-EEEEEecCHHHH-HHHHHHHHhcCCC-CceEEEeccccCCHHHHHHHHHH
Confidence 4566777554 556667553 45787 699999999887 7777777666533 355666665 211 111111
Q ss_pred hcCCCCCeeEEEEcCCC
Q 022298 225 FVGKDGPFDYMSVTPPY 241 (299)
Q Consensus 225 ~~~~~~~fDlI~iDPPY 241 (299)
.....++.|+++.+.-+
T Consensus 88 ~~~~~g~id~lv~nAg~ 104 (247)
T 3i1j_A 88 VEHEFGRLDGLLHNASI 104 (247)
T ss_dssp HHHHHSCCSEEEECCCC
T ss_pred HHHhCCCCCEEEECCcc
Confidence 11112478999988754
No 350
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=78.51 E-value=6.9 Score=34.23 Aligned_cols=84 Identities=14% Similarity=0.084 Sum_probs=51.8
Q ss_pred CCCEEEEECCccchHHHHH----HHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhH-H--HHHh-hhc
Q 022298 155 RPGRWLDLYSGTGSVGIEA----ISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETF-L--ERAE-QFV 226 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEA----lSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~-l--~~~~-~~~ 226 (299)
.++++|= -.|+|.+|.+. +.+|+ +|++++.+.... +.+.+.++..+- .++.++.+|+.+. . .... .+.
T Consensus 11 ~~k~vlI-TGas~GIG~~~a~~L~~~G~-~V~~~~r~~~~~-~~~~~~l~~~~~-~~~~~~~~Dl~~~~~~v~~~~~~~~ 86 (311)
T 3o26_A 11 KRRCAVV-TGGNKGIGFEICKQLSSNGI-MVVLTCRDVTKG-HEAVEKLKNSNH-ENVVFHQLDVTDPIATMSSLADFIK 86 (311)
T ss_dssp -CCEEEE-SSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHH-HHHHHHHHTTTC-CSEEEEECCTTSCHHHHHHHHHHHH
T ss_pred CCcEEEE-ecCCchHHHHHHHHHHHCCC-EEEEEeCCHHHH-HHHHHHHHhcCC-CceEEEEccCCCcHHHHHHHHHHHH
Confidence 3566664 45556677654 35687 699999999876 666666655442 3588899998664 1 1111 011
Q ss_pred CCCCCeeEEEEcCCCC
Q 022298 227 GKDGPFDYMSVTPPYT 242 (299)
Q Consensus 227 ~~~~~fDlI~iDPPY~ 242 (299)
...++.|+++.+.-..
T Consensus 87 ~~~g~iD~lv~nAg~~ 102 (311)
T 3o26_A 87 THFGKLDILVNNAGVA 102 (311)
T ss_dssp HHHSSCCEEEECCCCC
T ss_pred HhCCCCCEEEECCccc
Confidence 1125799999887543
No 351
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=78.14 E-value=9.1 Score=33.15 Aligned_cols=83 Identities=13% Similarity=0.053 Sum_probs=52.7
Q ss_pred CCCCEEEEECCccchHHHHH----HHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHH---hhhc
Q 022298 154 LRPGRWLDLYSGTGSVGIEA----ISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERA---EQFV 226 (299)
Q Consensus 154 ~~~~~VLDLfaGSGalgIEA----lSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~---~~~~ 226 (299)
+.+.++|=.| |+|.+|.+. +.+|+ +|+.++.+...+ +.+.+.+...+ .++.++.+|+.+...-. ....
T Consensus 27 l~~k~vlITG-as~gIG~~la~~l~~~G~-~V~~~~r~~~~~-~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~~ 101 (262)
T 3rkr_A 27 LSGQVAVVTG-ASRGIGAAIARKLGSLGA-RVVLTARDVEKL-RAVEREIVAAG--GEAESHACDLSHSDAIAAFATGVL 101 (262)
T ss_dssp TTTCEEEESS-TTSHHHHHHHHHHHHTTC-EEEEEESCHHHH-HHHHHHHHHTT--CEEEEEECCTTCHHHHHHHHHHHH
T ss_pred cCCCEEEEEC-CCChHHHHHHHHHHHCCC-EEEEEECCHHHH-HHHHHHHHHhC--CceeEEEecCCCHHHHHHHHHHHH
Confidence 3466777555 566677654 45687 599999999887 77777776654 34788888876432111 1011
Q ss_pred CCCCCeeEEEEcCCC
Q 022298 227 GKDGPFDYMSVTPPY 241 (299)
Q Consensus 227 ~~~~~fDlI~iDPPY 241 (299)
...++.|+++.+.-.
T Consensus 102 ~~~g~id~lv~~Ag~ 116 (262)
T 3rkr_A 102 AAHGRCDVLVNNAGV 116 (262)
T ss_dssp HHHSCCSEEEECCCC
T ss_pred HhcCCCCEEEECCCc
Confidence 112578999988654
No 352
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=77.71 E-value=12 Score=32.18 Aligned_cols=81 Identities=12% Similarity=0.045 Sum_probs=49.8
Q ss_pred CCCCEEEEECCccchHHHHH----HHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHH--HH-hhhc
Q 022298 154 LRPGRWLDLYSGTGSVGIEA----ISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLE--RA-EQFV 226 (299)
Q Consensus 154 ~~~~~VLDLfaGSGalgIEA----lSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~--~~-~~~~ 226 (299)
+.++++|=-| |+|.+|.+. +.+|+ +|+.++.++..+ +.+.+.++..+ .++.++.+|+.+... .. ....
T Consensus 3 l~~k~vlVTG-as~gIG~~ia~~l~~~G~-~V~~~~r~~~~~-~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~ 77 (260)
T 2qq5_A 3 MNGQVCVVTG-ASRGIGRGIALQLCKAGA-TVYITGRHLDTL-RVVAQEAQSLG--GQCVPVVCDSSQESEVRSLFEQVD 77 (260)
T ss_dssp TTTCEEEESS-TTSHHHHHHHHHHHHTTC-EEEEEESCHHHH-HHHHHHHHHHS--SEEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCEEEEeC-CCchHHHHHHHHHHHCCC-EEEEEeCCHHHH-HHHHHHHHHcC--CceEEEECCCCCHHHHHHHHHHHH
Confidence 3456666554 566677654 45787 699999998876 66656565544 347788888764321 11 1111
Q ss_pred CC-CCCeeEEEEcC
Q 022298 227 GK-DGPFDYMSVTP 239 (299)
Q Consensus 227 ~~-~~~fDlI~iDP 239 (299)
.. .++.|+++.+-
T Consensus 78 ~~~~g~id~lvnnA 91 (260)
T 2qq5_A 78 REQQGRLDVLVNNA 91 (260)
T ss_dssp HHHTTCCCEEEECC
T ss_pred HhcCCCceEEEECC
Confidence 11 35789999887
No 353
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=77.57 E-value=7.8 Score=34.18 Aligned_cols=83 Identities=16% Similarity=0.082 Sum_probs=52.2
Q ss_pred CCCCEEEEECCccchHHHH----HHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHH---Hhhhc
Q 022298 154 LRPGRWLDLYSGTGSVGIE----AISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLER---AEQFV 226 (299)
Q Consensus 154 ~~~~~VLDLfaGSGalgIE----AlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~---~~~~~ 226 (299)
+.++++|=-|++ |.+|.+ ++.+|+ +|+.++.+.+.+ +.+.+.++..+. ++.++.+|+.+...- .....
T Consensus 30 l~gk~~lVTGas-~GIG~aia~~la~~G~-~V~~~~r~~~~~-~~~~~~~~~~~~--~~~~~~~Dl~d~~~v~~~~~~~~ 104 (276)
T 3r1i_A 30 LSGKRALITGAS-TGIGKKVALAYAEAGA-QVAVAARHSDAL-QVVADEIAGVGG--KALPIRCDVTQPDQVRGMLDQMT 104 (276)
T ss_dssp CTTCEEEEESTT-SHHHHHHHHHHHHTTC-EEEEEESSGGGG-HHHHHHHHHTTC--CCEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCC-CHHHHHHHHHHHHCCC-EEEEEeCCHHHH-HHHHHHHHhcCC--eEEEEEcCCCCHHHHHHHHHHHH
Confidence 467788866655 455544 446787 699999999887 667666666543 467788887643211 11011
Q ss_pred CCCCCeeEEEEcCCC
Q 022298 227 GKDGPFDYMSVTPPY 241 (299)
Q Consensus 227 ~~~~~fDlI~iDPPY 241 (299)
...++.|+++.+.-.
T Consensus 105 ~~~g~iD~lvnnAg~ 119 (276)
T 3r1i_A 105 GELGGIDIAVCNAGI 119 (276)
T ss_dssp HHHSCCSEEEECCCC
T ss_pred HHcCCCCEEEECCCC
Confidence 112478999987643
No 354
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=77.52 E-value=16 Score=31.67 Aligned_cols=83 Identities=7% Similarity=-0.022 Sum_probs=52.5
Q ss_pred CCCCEEEEECCccchHHHHH----HHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHH--H-Hhhhc
Q 022298 154 LRPGRWLDLYSGTGSVGIEA----ISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLE--R-AEQFV 226 (299)
Q Consensus 154 ~~~~~VLDLfaGSGalgIEA----lSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~--~-~~~~~ 226 (299)
+.++++|=.| |+|.+|.+. +.+|+ +|++++.++..+ +.+.+.++..+ .++.++.+|+.+... . .....
T Consensus 29 l~~k~vlITG-asggIG~~la~~L~~~G~-~V~~~~r~~~~~-~~~~~~l~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~ 103 (272)
T 1yb1_A 29 VTGEIVLITG-AGHGIGRLTAYEFAKLKS-KLVLWDINKHGL-EETAAKCKGLG--AKVHTFVVDCSNREDIYSSAKKVK 103 (272)
T ss_dssp CTTCEEEEET-TTSHHHHHHHHHHHHTTC-EEEEEESCHHHH-HHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHH
T ss_pred cCCCEEEEEC-CCchHHHHHHHHHHHCCC-EEEEEEcCHHHH-HHHHHHHHhcC--CeEEEEEeeCCCHHHHHHHHHHHH
Confidence 4567777555 566677654 35687 699999999876 66666666554 347888888764321 1 11111
Q ss_pred CCCCCeeEEEEcCCC
Q 022298 227 GKDGPFDYMSVTPPY 241 (299)
Q Consensus 227 ~~~~~fDlI~iDPPY 241 (299)
...+.+|+|+.+.-+
T Consensus 104 ~~~g~iD~li~~Ag~ 118 (272)
T 1yb1_A 104 AEIGDVSILVNNAGV 118 (272)
T ss_dssp HHTCCCSEEEECCCC
T ss_pred HHCCCCcEEEECCCc
Confidence 112478999988754
No 355
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=77.17 E-value=14 Score=32.21 Aligned_cols=84 Identities=12% Similarity=0.048 Sum_probs=50.7
Q ss_pred CCCCEEEEECCccchHHHH----HHHcCCCEEEEEeCC------------HHHHHHHHHHHHHHhCCCCcEEEEEcchhh
Q 022298 154 LRPGRWLDLYSGTGSVGIE----AISRGCSEVHFVEMD------------PWVVSNVLIPNLEWTGFLDVSSIHTVRVET 217 (299)
Q Consensus 154 ~~~~~VLDLfaGSGalgIE----AlSrGa~~V~~VD~n------------~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~ 217 (299)
+.++++|=-|++ |.+|.+ ++.+|+ +|+.+|.+ .+.+ +.+.+.++..+ .++.++.+|+.+
T Consensus 11 l~gk~vlVTGas-~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~D~~~ 85 (278)
T 3sx2_A 11 LTGKVAFITGAA-RGQGRAHAVRLAADGA-DIIAVDLCDQIASVPYPLATPEEL-AATVKLVEDIG--SRIVARQADVRD 85 (278)
T ss_dssp TTTCEEEEESTT-SHHHHHHHHHHHHTTC-EEEEEECCSCCTTCSSCCCCHHHH-HHHHHHHHHHT--CCEEEEECCTTC
T ss_pred CCCCEEEEECCC-ChHHHHHHHHHHHCCC-eEEEEecccccccccccccchHHH-HHHHHHHHhcC--CeEEEEeCCCCC
Confidence 467788877654 455544 446787 59999987 6665 55555555555 357888998764
Q ss_pred HHHHH---hhhcCCCCCeeEEEEcCCCC
Q 022298 218 FLERA---EQFVGKDGPFDYMSVTPPYT 242 (299)
Q Consensus 218 ~l~~~---~~~~~~~~~fDlI~iDPPY~ 242 (299)
...-. .......++.|+++.+.-..
T Consensus 86 ~~~v~~~~~~~~~~~g~id~lv~nAg~~ 113 (278)
T 3sx2_A 86 RESLSAALQAGLDELGRLDIVVANAGIA 113 (278)
T ss_dssp HHHHHHHHHHHHHHHCCCCEEEECCCCC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 32111 10111124789999876443
No 356
>2dpm_A M.dpnii 1, protein (adenine-specific methyltransferase dpnii 1); DNA adenine methyltransferase, methylase; HET: SAM; 1.80A {Streptococcus pneumoniae} SCOP: c.66.1.28
Probab=77.00 E-value=0.84 Score=41.59 Aligned_cols=33 Identities=9% Similarity=0.285 Sum_probs=27.0
Q ss_pred CCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHH
Q 022298 156 PGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVV 191 (299)
Q Consensus 156 ~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al 191 (299)
..+++|+|||+|++++... ..+++..|+|++.+
T Consensus 36 ~~~yvEpF~GggaV~~~~~---~~~~i~ND~n~~Li 68 (284)
T 2dpm_A 36 YNRYFEPFVGGGALFFDLA---PKDAVINDFNAELI 68 (284)
T ss_dssp CSCEEETTCTTCHHHHHHC---CSEEEEEESCHHHH
T ss_pred cCEEEeecCCccHHHHhhh---ccceeeeecchHHH
Confidence 3689999999999998652 25799999999764
No 357
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=76.88 E-value=14 Score=32.50 Aligned_cols=79 Identities=9% Similarity=0.044 Sum_probs=48.8
Q ss_pred CCCCEEEEECCccchHHHHH----HHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCC
Q 022298 154 LRPGRWLDLYSGTGSVGIEA----ISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKD 229 (299)
Q Consensus 154 ~~~~~VLDLfaGSGalgIEA----lSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~ 229 (299)
+.++++|=-|+ +|.+|.+. +++|+ +|+.++.+.... +.+.+. + ..++.++.+|+.+...-. .+...-
T Consensus 14 l~gk~vlVTGa-s~gIG~~~a~~L~~~G~-~V~~~~r~~~~~-~~~~~~---~--~~~~~~~~~Dl~d~~~v~-~~~~~~ 84 (291)
T 3rd5_A 14 FAQRTVVITGA-NSGLGAVTARELARRGA-TVIMAVRDTRKG-EAAART---M--AGQVEVRELDLQDLSSVR-RFADGV 84 (291)
T ss_dssp CTTCEEEEECC-SSHHHHHHHHHHHHTTC-EEEEEESCHHHH-HHHHTT---S--SSEEEEEECCTTCHHHHH-HHHHTC
T ss_pred CCCCEEEEeCC-CChHHHHHHHHHHHCCC-EEEEEECCHHHH-HHHHHH---h--cCCeeEEEcCCCCHHHHH-HHHHhc
Confidence 45777776654 45666553 45787 699999998775 444332 2 345788999986543211 111112
Q ss_pred CCeeEEEEcCCC
Q 022298 230 GPFDYMSVTPPY 241 (299)
Q Consensus 230 ~~fDlI~iDPPY 241 (299)
++.|+++.+.-.
T Consensus 85 ~~iD~lv~nAg~ 96 (291)
T 3rd5_A 85 SGADVLINNAGI 96 (291)
T ss_dssp CCEEEEEECCCC
T ss_pred CCCCEEEECCcC
Confidence 578999977643
No 358
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=76.47 E-value=6.5 Score=35.99 Aligned_cols=73 Identities=19% Similarity=0.050 Sum_probs=42.1
Q ss_pred CCCEEEEECCccchHHHHHH----HcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCC
Q 022298 155 RPGRWLDLYSGTGSVGIEAI----SRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDG 230 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAl----SrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~ 230 (299)
.+.+||= .+|+|.+|..++ .+|+ +|++++.+++.+ +.+++ +|.. .++..+-.++........ ..
T Consensus 167 ~g~~VlV-~Gg~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~-~~~~~----lGa~---~~~~~~~~~~~~~~~~~~--~~ 234 (353)
T 4dup_A 167 EGESVLI-HGGTSGIGTTAIQLARAFGA-EVYATAGSTGKC-EACER----LGAK---RGINYRSEDFAAVIKAET--GQ 234 (353)
T ss_dssp TTCEEEE-SSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHH-HHHHH----HTCS---EEEETTTSCHHHHHHHHH--SS
T ss_pred CCCEEEE-EcCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHH-HHHHh----cCCC---EEEeCCchHHHHHHHHHh--CC
Confidence 4677774 455666666543 3688 699999999886 76654 5643 233322222222221112 35
Q ss_pred CeeEEEEcC
Q 022298 231 PFDYMSVTP 239 (299)
Q Consensus 231 ~fDlI~iDP 239 (299)
.+|+||-.-
T Consensus 235 g~Dvvid~~ 243 (353)
T 4dup_A 235 GVDIILDMI 243 (353)
T ss_dssp CEEEEEESC
T ss_pred CceEEEECC
Confidence 799988544
No 359
>2dpm_A M.dpnii 1, protein (adenine-specific methyltransferase dpnii 1); DNA adenine methyltransferase, methylase; HET: SAM; 1.80A {Streptococcus pneumoniae} SCOP: c.66.1.28
Probab=76.42 E-value=1.9 Score=39.26 Aligned_cols=29 Identities=17% Similarity=0.336 Sum_probs=20.0
Q ss_pred EEEE--EcchhhHHHHHhhhcCCCCCeeEEEEcCCCCC
Q 022298 208 SSIH--TVRVETFLERAEQFVGKDGPFDYMSVTPPYTA 243 (299)
Q Consensus 208 ~~vi--~~D~~~~l~~~~~~~~~~~~fDlI~iDPPY~~ 243 (299)
+++. +.|..+++... ..=|+|++||||..
T Consensus 169 v~i~~~~~Df~~~i~~~-------~~~~fvY~DPPY~~ 199 (284)
T 2dpm_A 169 NQLEIKVGDFEKAIVDV-------RTGDFVYFDPPYIP 199 (284)
T ss_dssp SEEEEEESCGGGGGTTC-------CTTCEEEECCCCCC
T ss_pred CEEEEeCCCHHHHHHhc-------CCCCEEEeCCCccc
Confidence 3566 77877766421 33489999999964
No 360
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=76.36 E-value=14 Score=32.82 Aligned_cols=82 Identities=15% Similarity=0.116 Sum_probs=49.6
Q ss_pred CCCCEEEEECCccchHHHH----HHHcCCCEEEEEeCC------------HHHHHHHHHHHHHHhCCCCcEEEEEcchhh
Q 022298 154 LRPGRWLDLYSGTGSVGIE----AISRGCSEVHFVEMD------------PWVVSNVLIPNLEWTGFLDVSSIHTVRVET 217 (299)
Q Consensus 154 ~~~~~VLDLfaGSGalgIE----AlSrGa~~V~~VD~n------------~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~ 217 (299)
+.++++|=-|+++| +|.+ ++.+|+ +|+.+|.+ .+.+ +.+.+.++..+ .++.++.+|+.+
T Consensus 26 l~gk~~lVTGas~G-IG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~Dv~~ 100 (299)
T 3t7c_A 26 VEGKVAFITGAARG-QGRSHAITLAREGA-DIIAIDVCKQLDGVKLPMSTPDDL-AETVRQVEALG--RRIIASQVDVRD 100 (299)
T ss_dssp TTTCEEEEESTTSH-HHHHHHHHHHHTTC-EEEEEECCSCCTTCCSCCCCHHHH-HHHHHHHHHTT--CCEEEEECCTTC
T ss_pred cCCCEEEEECCCCH-HHHHHHHHHHHCCC-EEEEEecccccccccccccCHHHH-HHHHHHHHhcC--CceEEEECCCCC
Confidence 46778887776554 4544 446787 59999987 5555 55555555554 357888888765
Q ss_pred HHHHH---hhhcCCCCCeeEEEEcCC
Q 022298 218 FLERA---EQFVGKDGPFDYMSVTPP 240 (299)
Q Consensus 218 ~l~~~---~~~~~~~~~fDlI~iDPP 240 (299)
...-. .......++.|+++.+.=
T Consensus 101 ~~~v~~~~~~~~~~~g~iD~lv~nAg 126 (299)
T 3t7c_A 101 FDAMQAAVDDGVTQLGRLDIVLANAA 126 (299)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHHHHHHHHhCCCCEEEECCC
Confidence 32110 001111257899997754
No 361
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=76.27 E-value=4.7 Score=37.33 Aligned_cols=79 Identities=14% Similarity=-0.035 Sum_probs=43.5
Q ss_pred CCEEEEECCccchHHHHHH----HcC-CC--EEEEEeCCHH--------HHHHHHHHHHHHhC-C-CC--cEEEEEcchh
Q 022298 156 PGRWLDLYSGTGSVGIEAI----SRG-CS--EVHFVEMDPW--------VVSNVLIPNLEWTG-F-LD--VSSIHTVRVE 216 (299)
Q Consensus 156 ~~~VLDLfaGSGalgIEAl----SrG-a~--~V~~VD~n~~--------Al~~~a~~N~~~~g-~-~~--~~~vi~~D~~ 216 (299)
.-+|||+|-|||--.+.++ ..+ .. +.+.+|.++- ...++.+.-.+... + .+ ..+++.+|+.
T Consensus 97 ~~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~~~~~v~L~l~~GDa~ 176 (308)
T 3vyw_A 97 VIRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEYEGERLSLKVLLGDAR 176 (308)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEEECSSEEEEEEESCHH
T ss_pred CcEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCccccCCcEEEEEEechHH
Confidence 4589999999997554333 222 22 3455665321 11011221122111 1 12 2467889998
Q ss_pred hHHHHHhhhcCCCCCeeEEEEcC
Q 022298 217 TFLERAEQFVGKDGPFDYMSVTP 239 (299)
Q Consensus 217 ~~l~~~~~~~~~~~~fDlI~iDP 239 (299)
+.+... ...+||+||+|+
T Consensus 177 ~~l~~l-----~~~~~Da~flDg 194 (308)
T 3vyw_A 177 KRIKEV-----ENFKADAVFHDA 194 (308)
T ss_dssp HHGGGC-----CSCCEEEEEECC
T ss_pred HHHhhh-----cccceeEEEeCC
Confidence 877543 134799999998
No 362
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=76.05 E-value=6.6 Score=35.75 Aligned_cols=40 Identities=20% Similarity=0.140 Sum_probs=28.9
Q ss_pred CCCEEEEECCccchHHHHHH----HcCCCEEEEEeCCHHHHHHHHHH
Q 022298 155 RPGRWLDLYSGTGSVGIEAI----SRGCSEVHFVEMDPWVVSNVLIP 197 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAl----SrGa~~V~~VD~n~~Al~~~a~~ 197 (299)
.+.+||=. +|+|.+|+.++ .+|+ +|++++.+++.+ +.+++
T Consensus 150 ~g~~VlV~-gg~G~vG~~a~qla~~~Ga-~Vi~~~~~~~~~-~~~~~ 193 (346)
T 3fbg_A 150 EGKTLLII-NGAGGVGSIATQIAKAYGL-RVITTASRNETI-EWTKK 193 (346)
T ss_dssp TTCEEEEE-STTSHHHHHHHHHHHHTTC-EEEEECCSHHHH-HHHHH
T ss_pred CCCEEEEE-cCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHH-HHHHh
Confidence 46777754 45677776654 3688 799999999886 77664
No 363
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=75.86 E-value=7.6 Score=33.63 Aligned_cols=82 Identities=13% Similarity=0.031 Sum_probs=49.8
Q ss_pred CCCCEEEEECCccchHHHHH----HHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHH---Hhhhc
Q 022298 154 LRPGRWLDLYSGTGSVGIEA----ISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLER---AEQFV 226 (299)
Q Consensus 154 ~~~~~VLDLfaGSGalgIEA----lSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~---~~~~~ 226 (299)
+.++++|=-| |+|.+|.+. +.+|+ +|+.++.++..+ +.+.+.++..+ .++.++.+|+.+...- .....
T Consensus 4 l~~k~vlVTG-as~gIG~aia~~l~~~G~-~V~~~~r~~~~~-~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~ 78 (257)
T 3imf_A 4 MKEKVVIITG-GSSGMGKGMATRFAKEGA-RVVITGRTKEKL-EEAKLEIEQFP--GQILTVQMDVRNTDDIQKMIEQID 78 (257)
T ss_dssp TTTCEEEETT-TTSHHHHHHHHHHHHTTC-EEEEEESCHHHH-HHHHHHHCCST--TCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEEC-CCCHHHHHHHHHHHHCCC-EEEEEeCCHHHH-HHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHH
Confidence 4566777555 455666553 45787 599999999886 66655554333 3578888887643211 11111
Q ss_pred CCCCCeeEEEEcCC
Q 022298 227 GKDGPFDYMSVTPP 240 (299)
Q Consensus 227 ~~~~~fDlI~iDPP 240 (299)
...++.|+++.+.-
T Consensus 79 ~~~g~id~lv~nAg 92 (257)
T 3imf_A 79 EKFGRIDILINNAA 92 (257)
T ss_dssp HHHSCCCEEEECCC
T ss_pred HHcCCCCEEEECCC
Confidence 11247899998764
No 364
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=75.51 E-value=17 Score=31.55 Aligned_cols=76 Identities=17% Similarity=0.163 Sum_probs=47.5
Q ss_pred CCCCEEEEECCccchHHHH----HHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHH--H-hhhc
Q 022298 154 LRPGRWLDLYSGTGSVGIE----AISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLER--A-EQFV 226 (299)
Q Consensus 154 ~~~~~VLDLfaGSGalgIE----AlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~--~-~~~~ 226 (299)
+.++++|=-|+ +|.+|.+ ++++|+ +|+.++.+...+ +.+.+.+ + .++.++.+|+.+...- . ...
T Consensus 28 l~~k~vlVTGa-s~GIG~aia~~l~~~G~-~Vi~~~r~~~~~-~~~~~~~---~--~~~~~~~~Dl~~~~~v~~~~~~~- 98 (281)
T 3ppi_A 28 FEGASAIVSGG-AGGLGEATVRRLHADGL-GVVIADLAAEKG-KALADEL---G--NRAEFVSTNVTSEDSVLAAIEAA- 98 (281)
T ss_dssp GTTEEEEEETT-TSHHHHHHHHHHHHTTC-EEEEEESCHHHH-HHHHHHH---C--TTEEEEECCTTCHHHHHHHHHHH-
T ss_pred cCCCEEEEECC-CChHHHHHHHHHHHCCC-EEEEEeCChHHH-HHHHHHh---C--CceEEEEcCCCCHHHHHHHHHHH-
Confidence 35667776665 4555654 346787 699999998876 5544443 3 3578889987654311 1 111
Q ss_pred CCCCCeeEEEEc
Q 022298 227 GKDGPFDYMSVT 238 (299)
Q Consensus 227 ~~~~~fDlI~iD 238 (299)
...+..|+++.+
T Consensus 99 ~~~~~id~lv~~ 110 (281)
T 3ppi_A 99 NQLGRLRYAVVA 110 (281)
T ss_dssp TTSSEEEEEEEC
T ss_pred HHhCCCCeEEEc
Confidence 233578999987
No 365
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=75.41 E-value=10 Score=33.46 Aligned_cols=83 Identities=16% Similarity=0.073 Sum_probs=50.4
Q ss_pred CCCCEEEEECCccchHHHH----HHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHH---Hhhhc
Q 022298 154 LRPGRWLDLYSGTGSVGIE----AISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLER---AEQFV 226 (299)
Q Consensus 154 ~~~~~VLDLfaGSGalgIE----AlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~---~~~~~ 226 (299)
+.+.++|=-|++ |.+|.+ ++.+|+ +|+.++.+...+ +.+.+.+...+ .++.++.+|+.+...- .....
T Consensus 26 ~~~k~~lVTGas-~GIG~aia~~la~~G~-~V~~~~r~~~~~-~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~ 100 (283)
T 3v8b_A 26 QPSPVALITGAG-SGIGRATALALAADGV-TVGALGRTRTEV-EEVADEIVGAG--GQAIALEADVSDELQMRNAVRDLV 100 (283)
T ss_dssp -CCCEEEEESCS-SHHHHHHHHHHHHTTC-EEEEEESSHHHH-HHHHHHHTTTT--CCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEECCC-CHHHHHHHHHHHHCCC-EEEEEeCCHHHH-HHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHH
Confidence 356777766655 455554 445787 699999999876 66655554433 3577888887654211 01011
Q ss_pred CCCCCeeEEEEcCCC
Q 022298 227 GKDGPFDYMSVTPPY 241 (299)
Q Consensus 227 ~~~~~fDlI~iDPPY 241 (299)
...++.|+++.+.-+
T Consensus 101 ~~~g~iD~lVnnAg~ 115 (283)
T 3v8b_A 101 LKFGHLDIVVANAGI 115 (283)
T ss_dssp HHHSCCCEEEECCCC
T ss_pred HHhCCCCEEEECCCC
Confidence 112578999987643
No 366
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=75.26 E-value=3.8 Score=37.73 Aligned_cols=43 Identities=23% Similarity=0.102 Sum_probs=31.6
Q ss_pred CCCEEEEECCccchHHHHHH----HcCCCEEEEEeCCHHHHHHHHHHHHHHhCC
Q 022298 155 RPGRWLDLYSGTGSVGIEAI----SRGCSEVHFVEMDPWVVSNVLIPNLEWTGF 204 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAl----SrGa~~V~~VD~n~~Al~~~a~~N~~~~g~ 204 (299)
.+.+||-.|| |.+|+.++ .+|+.+|+++|.+++.. +.++ .+|.
T Consensus 191 ~g~~VlV~Ga--G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~-~~a~----~lGa 237 (373)
T 1p0f_A 191 PGSTCAVFGL--GGVGFSAIVGCKAAGASRIIGVGTHKDKF-PKAI----ELGA 237 (373)
T ss_dssp TTCEEEEECC--SHHHHHHHHHHHHHTCSEEEEECSCGGGH-HHHH----HTTC
T ss_pred CCCEEEEECC--CHHHHHHHHHHHHcCCCeEEEECCCHHHH-HHHH----HcCC
Confidence 5789998875 56666543 36887899999999886 6664 3665
No 367
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=75.24 E-value=15 Score=32.52 Aligned_cols=84 Identities=6% Similarity=-0.052 Sum_probs=51.8
Q ss_pred CCCEEEEECCccchHHHHH----HHcCC--CEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHH--H-Hhhh
Q 022298 155 RPGRWLDLYSGTGSVGIEA----ISRGC--SEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLE--R-AEQF 225 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEA----lSrGa--~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~--~-~~~~ 225 (299)
.++++|=-|++ |.+|.+. +.+|+ .+|+.++.+.+.+ +.+.+.++...-..++.++.+|+.+... . ....
T Consensus 32 ~~k~~lVTGas-~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~-~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~ 109 (287)
T 3rku_A 32 AKKTVLITGAS-AGIGKATALEYLEASNGDMKLILAARRLEKL-EELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENL 109 (287)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHHHHTTCSEEEEEESCHHHH-HHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTS
T ss_pred CCCEEEEecCC-ChHHHHHHHHHHHcCCCCceEEEEECCHHHH-HHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHH
Confidence 46778866654 5556543 34566 3799999999887 6776666654323457788888764321 1 1111
Q ss_pred cCCCCCeeEEEEcCC
Q 022298 226 VGKDGPFDYMSVTPP 240 (299)
Q Consensus 226 ~~~~~~fDlI~iDPP 240 (299)
....++.|+++.+.=
T Consensus 110 ~~~~g~iD~lVnnAG 124 (287)
T 3rku_A 110 PQEFKDIDILVNNAG 124 (287)
T ss_dssp CGGGCSCCEEEECCC
T ss_pred HHhcCCCCEEEECCC
Confidence 112247899997754
No 368
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=75.21 E-value=8.1 Score=33.95 Aligned_cols=83 Identities=13% Similarity=0.047 Sum_probs=52.0
Q ss_pred CCCCEEEEECCccchHHHH----HHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHH---Hhhhc
Q 022298 154 LRPGRWLDLYSGTGSVGIE----AISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLER---AEQFV 226 (299)
Q Consensus 154 ~~~~~VLDLfaGSGalgIE----AlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~---~~~~~ 226 (299)
+.++++|=-| |+|.+|.+ ++.+|+ +|+.++.++..+ +.+.+.++..+ .++.++.+|+.+...- .....
T Consensus 24 l~gk~~lVTG-as~gIG~aia~~la~~G~-~V~~~~r~~~~~-~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~ 98 (271)
T 4ibo_A 24 LGGRTALVTG-SSRGLGRAMAEGLAVAGA-RILINGTDPSRV-AQTVQEFRNVG--HDAEAVAFDVTSESEIIEAFARLD 98 (271)
T ss_dssp CTTCEEEETT-CSSHHHHHHHHHHHHTTC-EEEECCSCHHHH-HHHHHHHHHTT--CCEEECCCCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEeC-CCcHHHHHHHHHHHHCCC-EEEEEeCCHHHH-HHHHHHHHhcC--CceEEEEcCCCCHHHHHHHHHHHH
Confidence 4577777655 45555654 345787 699999999887 66666666555 3477788887643211 11111
Q ss_pred CCCCCeeEEEEcCCC
Q 022298 227 GKDGPFDYMSVTPPY 241 (299)
Q Consensus 227 ~~~~~fDlI~iDPPY 241 (299)
...++.|+++.+.-.
T Consensus 99 ~~~g~iD~lv~nAg~ 113 (271)
T 4ibo_A 99 EQGIDVDILVNNAGI 113 (271)
T ss_dssp HHTCCCCEEEECCCC
T ss_pred HHCCCCCEEEECCCC
Confidence 123578999987643
No 369
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=74.73 E-value=17 Score=31.56 Aligned_cols=83 Identities=13% Similarity=0.061 Sum_probs=50.3
Q ss_pred CCCCEEEEECCccchHHHH----HHHcCCCEEEEEeCC------------HHHHHHHHHHHHHHhCCCCcEEEEEcchhh
Q 022298 154 LRPGRWLDLYSGTGSVGIE----AISRGCSEVHFVEMD------------PWVVSNVLIPNLEWTGFLDVSSIHTVRVET 217 (299)
Q Consensus 154 ~~~~~VLDLfaGSGalgIE----AlSrGa~~V~~VD~n------------~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~ 217 (299)
+.++++|=-|++ |.+|.+ ++.+|+ +|+.+|.+ .+.+ +.+...++..+ .++.++.+|+.+
T Consensus 8 l~gk~vlVTGas-~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~D~~~ 82 (287)
T 3pxx_A 8 VQDKVVLVTGGA-RGQGRSHAVKLAEEGA-DIILFDICHDIETNEYPLATSRDL-EEAGLEVEKTG--RKAYTAEVDVRD 82 (287)
T ss_dssp TTTCEEEEETTT-SHHHHHHHHHHHHTTC-EEEEEECCSCCTTSCSCCCCHHHH-HHHHHHHHHTT--SCEEEEECCTTC
T ss_pred cCCCEEEEeCCC-ChHHHHHHHHHHHCCC-eEEEEcccccccccccchhhhHHH-HHHHHHHHhcC--CceEEEEccCCC
Confidence 457778866655 455554 446787 59999987 5555 55555555554 347888888764
Q ss_pred HHHH---HhhhcCCCCCeeEEEEcCCC
Q 022298 218 FLER---AEQFVGKDGPFDYMSVTPPY 241 (299)
Q Consensus 218 ~l~~---~~~~~~~~~~fDlI~iDPPY 241 (299)
...- ........++.|+++.+.-+
T Consensus 83 ~~~v~~~~~~~~~~~g~id~lv~nAg~ 109 (287)
T 3pxx_A 83 RAAVSRELANAVAEFGKLDVVVANAGI 109 (287)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCc
Confidence 3211 11111112478999987654
No 370
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=74.47 E-value=12 Score=32.86 Aligned_cols=83 Identities=11% Similarity=0.011 Sum_probs=51.8
Q ss_pred CCCCEEEEECCccchHHHH----HHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHH---Hhhhc
Q 022298 154 LRPGRWLDLYSGTGSVGIE----AISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLER---AEQFV 226 (299)
Q Consensus 154 ~~~~~VLDLfaGSGalgIE----AlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~---~~~~~ 226 (299)
+.++++|=-| |+|.+|.+ ++.+|+ +|+.++.+...+ +.+.+.++..+. ++..+.+|+.+...- .....
T Consensus 26 l~~k~~lVTG-as~GIG~aia~~la~~G~-~V~~~~r~~~~~-~~~~~~~~~~~~--~~~~~~~Dv~d~~~v~~~~~~~~ 100 (270)
T 3ftp_A 26 LDKQVAIVTG-ASRGIGRAIALELARRGA-MVIGTATTEAGA-EGIGAAFKQAGL--EGRGAVLNVNDATAVDALVESTL 100 (270)
T ss_dssp TTTCEEEETT-CSSHHHHHHHHHHHHTTC-EEEEEESSHHHH-HHHHHHHHHHTC--CCEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEEC-CCCHHHHHHHHHHHHCCC-EEEEEeCCHHHH-HHHHHHHHhcCC--cEEEEEEeCCCHHHHHHHHHHHH
Confidence 4566777555 55556654 346788 699999999887 777777776654 356778887543211 11011
Q ss_pred CCCCCeeEEEEcCCC
Q 022298 227 GKDGPFDYMSVTPPY 241 (299)
Q Consensus 227 ~~~~~fDlI~iDPPY 241 (299)
...++.|+++.+.-.
T Consensus 101 ~~~g~iD~lvnnAg~ 115 (270)
T 3ftp_A 101 KEFGALNVLVNNAGI 115 (270)
T ss_dssp HHHSCCCEEEECCCC
T ss_pred HHcCCCCEEEECCCC
Confidence 112478999988643
No 371
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=74.38 E-value=19 Score=30.79 Aligned_cols=82 Identities=16% Similarity=0.067 Sum_probs=50.4
Q ss_pred CCCCEEEEECCccchHHHH----HHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHH--H-hhhc
Q 022298 154 LRPGRWLDLYSGTGSVGIE----AISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLER--A-EQFV 226 (299)
Q Consensus 154 ~~~~~VLDLfaGSGalgIE----AlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~--~-~~~~ 226 (299)
+.++++|=-|+ +|.+|.+ ++.+|+ +|+.++.+++.+ +.+.+.++..+ .++.++.+|+.+...- . ....
T Consensus 5 l~~k~~lVTGa-s~gIG~aia~~l~~~G~-~V~~~~r~~~~~-~~~~~~l~~~~--~~~~~~~~Dv~~~~~~~~~~~~~~ 79 (247)
T 2jah_A 5 LQGKVALITGA-SSGIGEATARALAAEGA-AVAIAARRVEKL-RALGDELTAAG--AKVHVLELDVADRQGVDAAVASTV 79 (247)
T ss_dssp TTTCEEEEESC-SSHHHHHHHHHHHHTTC-EEEEEESCHHHH-HHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEECC-CCHHHHHHHHHHHHCCC-EEEEEECCHHHH-HHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHH
Confidence 45677776665 4556655 345787 699999998876 66666665544 3477888887643211 1 0001
Q ss_pred CCCCCeeEEEEcCC
Q 022298 227 GKDGPFDYMSVTPP 240 (299)
Q Consensus 227 ~~~~~fDlI~iDPP 240 (299)
...+..|+++.+.-
T Consensus 80 ~~~g~id~lv~nAg 93 (247)
T 2jah_A 80 EALGGLDILVNNAG 93 (247)
T ss_dssp HHHSCCSEEEECCC
T ss_pred HHcCCCCEEEECCC
Confidence 11247899998754
No 372
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=74.37 E-value=4.8 Score=37.11 Aligned_cols=43 Identities=21% Similarity=0.231 Sum_probs=31.4
Q ss_pred CCCEEEEECCccchHHHHHH----HcCCCEEEEEeCCHHHHHHHHHHHHHHhCC
Q 022298 155 RPGRWLDLYSGTGSVGIEAI----SRGCSEVHFVEMDPWVVSNVLIPNLEWTGF 204 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAl----SrGa~~V~~VD~n~~Al~~~a~~N~~~~g~ 204 (299)
.+.+||-.+| |.+|+.++ .+|+.+|+++|.+++.+ +.++ .+|.
T Consensus 192 ~g~~VlV~Ga--G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~-~~~~----~lGa 238 (374)
T 1cdo_A 192 PGSTCAVFGL--GAVGLAAVMGCHSAGAKRIIAVDLNPDKF-EKAK----VFGA 238 (374)
T ss_dssp TTCEEEEECC--SHHHHHHHHHHHHTTCSEEEEECSCGGGH-HHHH----HTTC
T ss_pred CCCEEEEECC--CHHHHHHHHHHHHcCCCEEEEEcCCHHHH-HHHH----HhCC
Confidence 5789998875 56666543 36887899999999886 6664 3565
No 373
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=74.17 E-value=23 Score=30.94 Aligned_cols=81 Identities=19% Similarity=0.150 Sum_probs=50.1
Q ss_pred CCCEEEEECCccchHHHHH----HHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHH--H-HhhhcC
Q 022298 155 RPGRWLDLYSGTGSVGIEA----ISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLE--R-AEQFVG 227 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEA----lSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~--~-~~~~~~ 227 (299)
.++++|=.|+ +|.+|.+. +.+|+ +|++++.++..+ +.+.+.++..+ .++.++.+|+.+... . ......
T Consensus 21 ~~k~vlVTGa-s~gIG~~ia~~l~~~G~-~V~~~~r~~~~~-~~~~~~l~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~ 95 (277)
T 2rhc_B 21 DSEVALVTGA-TSGIGLEIARRLGKEGL-RVFVCARGEEGL-RTTLKELREAG--VEADGRTCDVRSVPEIEALVAAVVE 95 (277)
T ss_dssp TSCEEEEETC-SSHHHHHHHHHHHHTTC-EEEEEESCHHHH-HHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEECC-CCHHHHHHHHHHHHCCC-EEEEEeCCHHHH-HHHHHHHHhcC--CceEEEECCCCCHHHHHHHHHHHHH
Confidence 4667776665 56666553 45687 699999998876 66666665544 247788888754321 1 111111
Q ss_pred CCCCeeEEEEcCC
Q 022298 228 KDGPFDYMSVTPP 240 (299)
Q Consensus 228 ~~~~fDlI~iDPP 240 (299)
..+..|+++.+.-
T Consensus 96 ~~g~iD~lv~~Ag 108 (277)
T 2rhc_B 96 RYGPVDVLVNNAG 108 (277)
T ss_dssp HTCSCSEEEECCC
T ss_pred HhCCCCEEEECCC
Confidence 1257899998764
No 374
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=74.15 E-value=3.9 Score=38.93 Aligned_cols=21 Identities=14% Similarity=0.039 Sum_probs=17.7
Q ss_pred CCEEEEECCccchHHHHHHHc
Q 022298 156 PGRWLDLYSGTGSVGIEAISR 176 (299)
Q Consensus 156 ~~~VLDLfaGSGalgIEAlSr 176 (299)
..+|+|+||++|..++.+++.
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ 73 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRD 73 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHH
T ss_pred ceEEEecCCCCCchHHHHHHH
Confidence 468999999999998877654
No 375
>1yf3_A DNA adenine methylase; T4DAM, methyltransferase, transferase-DNA complex; HET: DNA SAH; 2.29A {Enterobacteria phage T4} SCOP: c.66.1.28 PDB: 1yfj_A* 1yfl_A* 1q0s_A* 1q0t_A*
Probab=74.15 E-value=1.3 Score=39.74 Aligned_cols=12 Identities=42% Similarity=0.794 Sum_probs=10.4
Q ss_pred eeEEEEcCCCCC
Q 022298 232 FDYMSVTPPYTA 243 (299)
Q Consensus 232 fDlI~iDPPY~~ 243 (299)
=|+|++||||..
T Consensus 165 ~~fvY~DPPY~~ 176 (259)
T 1yf3_A 165 GDFVYVDPPYLI 176 (259)
T ss_dssp TEEEEECCCCTT
T ss_pred CeEEEECCCCCC
Confidence 489999999965
No 376
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=74.02 E-value=11 Score=33.04 Aligned_cols=80 Identities=11% Similarity=0.069 Sum_probs=49.6
Q ss_pred CCCEEEEECCccchHHHHH----HHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHH--HH-hhhcC
Q 022298 155 RPGRWLDLYSGTGSVGIEA----ISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLE--RA-EQFVG 227 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEA----lSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~--~~-~~~~~ 227 (299)
.+.++| +-.|+|.+|.+. +++|+ +|++++.++..+ +.+.+.++..+. .++.++.+|+.+... .. .....
T Consensus 27 ~~k~vl-ITGasggIG~~la~~l~~~G~-~V~~~~r~~~~~-~~~~~~~~~~~~-~~~~~~~~Dl~d~~~v~~~~~~~~~ 102 (286)
T 1xu9_A 27 QGKKVI-VTGASKGIGREMAYHLAKMGA-HVVVTARSKETL-QKVVSHCLELGA-ASAHYIAGTMEDMTFAEQFVAQAGK 102 (286)
T ss_dssp TTCEEE-ESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHH-HHHHHHHHHHTC-SEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEE-EeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHH-HHHHHHHHHhCC-CceEEEeCCCCCHHHHHHHHHHHHH
Confidence 456777 445667777654 35787 699999999886 666666655543 247788888765321 11 00001
Q ss_pred CCCCeeEEEEc
Q 022298 228 KDGPFDYMSVT 238 (299)
Q Consensus 228 ~~~~fDlI~iD 238 (299)
..+..|+++.+
T Consensus 103 ~~g~iD~li~n 113 (286)
T 1xu9_A 103 LMGGLDMLILN 113 (286)
T ss_dssp HHTSCSEEEEC
T ss_pred HcCCCCEEEEC
Confidence 12478999977
No 377
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=73.79 E-value=4.3 Score=37.85 Aligned_cols=41 Identities=15% Similarity=0.109 Sum_probs=29.3
Q ss_pred CCCEEEEECCcc-chHHHHHHH-cCCCEEEEEeCCHHHHHHHHH
Q 022298 155 RPGRWLDLYSGT-GSVGIEAIS-RGCSEVHFVEMDPWVVSNVLI 196 (299)
Q Consensus 155 ~~~~VLDLfaGS-GalgIEAlS-rGa~~V~~VD~n~~Al~~~a~ 196 (299)
.+.+||-.|||. |.+++.++. +|+.+|+++|.+++.+ +.++
T Consensus 185 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~-~~a~ 227 (398)
T 2dph_A 185 PGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERL-KLLS 227 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHH-HHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHH-HHHH
Confidence 578999998643 444444333 6887899999999876 6654
No 378
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=73.77 E-value=4.2 Score=36.95 Aligned_cols=41 Identities=15% Similarity=0.000 Sum_probs=29.4
Q ss_pred CCCEEEEECCc--cchHHHHHH-HcCCCEEEEEeCCHHHHHHHHHH
Q 022298 155 RPGRWLDLYSG--TGSVGIEAI-SRGCSEVHFVEMDPWVVSNVLIP 197 (299)
Q Consensus 155 ~~~~VLDLfaG--SGalgIEAl-SrGa~~V~~VD~n~~Al~~~a~~ 197 (299)
.+.+||-.||| .|...+.++ .+|+ +|++++.+++.+ +.+++
T Consensus 144 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~-~~~~~ 187 (340)
T 3gms_A 144 RNDVLLVNACGSAIGHLFAQLSQILNF-RLIAVTRNNKHT-EELLR 187 (340)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHHTC-EEEEEESSSTTH-HHHHH
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHcCC-EEEEEeCCHHHH-HHHHh
Confidence 57899988776 344444444 3688 799999998876 77654
No 379
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=73.74 E-value=23 Score=31.33 Aligned_cols=83 Identities=20% Similarity=0.134 Sum_probs=50.8
Q ss_pred CCCCEEEEECCccc-hHH----HHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHH---Hhhh
Q 022298 154 LRPGRWLDLYSGTG-SVG----IEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLER---AEQF 225 (299)
Q Consensus 154 ~~~~~VLDLfaGSG-alg----IEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~---~~~~ 225 (299)
+.++++|=-|+++| .+| ..++.+|+ +|+.++.+.... +.+++-.+..+ ++.++.+|+.+...- ....
T Consensus 29 l~gk~~lVTGasg~~GIG~aia~~la~~G~-~V~~~~r~~~~~-~~~~~~~~~~~---~~~~~~~Dv~d~~~v~~~~~~~ 103 (293)
T 3grk_A 29 LQGKRGLILGVANNRSIAWGIAKAAREAGA-ELAFTYQGDALK-KRVEPLAEELG---AFVAGHCDVADAASIDAVFETL 103 (293)
T ss_dssp TTTCEEEEECCCSSSSHHHHHHHHHHHTTC-EEEEEECSHHHH-HHHHHHHHHHT---CEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCCCCcHHHHHHHHHHHCCC-EEEEEcCCHHHH-HHHHHHHHhcC---CceEEECCCCCHHHHHHHHHHH
Confidence 46788888887643 244 34456787 599999997654 55555444444 367888887643211 1111
Q ss_pred cCCCCCeeEEEEcCCC
Q 022298 226 VGKDGPFDYMSVTPPY 241 (299)
Q Consensus 226 ~~~~~~fDlI~iDPPY 241 (299)
....++.|+++.+.=.
T Consensus 104 ~~~~g~iD~lVnnAG~ 119 (293)
T 3grk_A 104 EKKWGKLDFLVHAIGF 119 (293)
T ss_dssp HHHTSCCSEEEECCCC
T ss_pred HHhcCCCCEEEECCcc
Confidence 1123578999987644
No 380
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=73.37 E-value=24 Score=30.29 Aligned_cols=82 Identities=13% Similarity=0.055 Sum_probs=50.4
Q ss_pred CCCCEEEEECCccchHHHHH----HHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHH--H-hhhc
Q 022298 154 LRPGRWLDLYSGTGSVGIEA----ISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLER--A-EQFV 226 (299)
Q Consensus 154 ~~~~~VLDLfaGSGalgIEA----lSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~--~-~~~~ 226 (299)
+.++++|=-|+ +|.+|.+. +.+|+ +|+.++.++..+ +.+.+.++..+ .++.++.+|+.+...- . ....
T Consensus 7 l~~k~vlVTGa-s~giG~~ia~~l~~~G~-~V~~~~r~~~~~-~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~ 81 (260)
T 2ae2_A 7 LEGCTALVTGG-SRGIGYGIVEELASLGA-SVYTCSRNQKEL-NDCLTQWRSKG--FKVEASVCDLSSRSERQELMNTVA 81 (260)
T ss_dssp CTTCEEEEESC-SSHHHHHHHHHHHHTTC-EEEEEESCHHHH-HHHHHHHHHTT--CEEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEECC-CcHHHHHHHHHHHHCCC-EEEEEeCCHHHH-HHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHH
Confidence 45677876655 56666553 45787 699999998876 65555555443 3477888887654211 1 1011
Q ss_pred CCC-CCeeEEEEcCC
Q 022298 227 GKD-GPFDYMSVTPP 240 (299)
Q Consensus 227 ~~~-~~fDlI~iDPP 240 (299)
... +..|+++.+.-
T Consensus 82 ~~~~g~id~lv~~Ag 96 (260)
T 2ae2_A 82 NHFHGKLNILVNNAG 96 (260)
T ss_dssp HHTTTCCCEEEECCC
T ss_pred HHcCCCCCEEEECCC
Confidence 112 57899998764
No 381
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=73.14 E-value=15 Score=31.81 Aligned_cols=80 Identities=11% Similarity=0.120 Sum_probs=49.1
Q ss_pred CCCCEEEEECCccchHHHH----HHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHH---hhhc
Q 022298 154 LRPGRWLDLYSGTGSVGIE----AISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERA---EQFV 226 (299)
Q Consensus 154 ~~~~~VLDLfaGSGalgIE----AlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~---~~~~ 226 (299)
+.++++|=-|++ |.+|.+ ++.+|+ +|+.++.+++.+ +.+.+.+ + .++.++.+|+.+...-. ....
T Consensus 6 l~gk~~lVTGas-~gIG~a~a~~l~~~G~-~V~~~~r~~~~~-~~~~~~~---~--~~~~~~~~Dv~~~~~v~~~~~~~~ 77 (255)
T 4eso_A 6 YQGKKAIVIGGT-HGMGLATVRRLVEGGA-EVLLTGRNESNI-ARIREEF---G--PRVHALRSDIADLNEIAVLGAAAG 77 (255)
T ss_dssp TTTCEEEEETCS-SHHHHHHHHHHHHTTC-EEEEEESCHHHH-HHHHHHH---G--GGEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEECCC-CHHHHHHHHHHHHCCC-EEEEEeCCHHHH-HHHHHHh---C--CcceEEEccCCCHHHHHHHHHHHH
Confidence 457788877655 445554 446787 699999998876 5554433 2 34778888876542111 0001
Q ss_pred CCCCCeeEEEEcCCC
Q 022298 227 GKDGPFDYMSVTPPY 241 (299)
Q Consensus 227 ~~~~~fDlI~iDPPY 241 (299)
...++.|+++.+.-+
T Consensus 78 ~~~g~id~lv~nAg~ 92 (255)
T 4eso_A 78 QTLGAIDLLHINAGV 92 (255)
T ss_dssp HHHSSEEEEEECCCC
T ss_pred HHhCCCCEEEECCCC
Confidence 112579999987644
No 382
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=73.09 E-value=7.1 Score=34.35 Aligned_cols=76 Identities=16% Similarity=0.098 Sum_probs=44.0
Q ss_pred CCCEEEEECCccchHHHHH---H-HcCCCEEEEEeCCH-------------------HHHHHHHHHHHHHhCCCCcEEEE
Q 022298 155 RPGRWLDLYSGTGSVGIEA---I-SRGCSEVHFVEMDP-------------------WVVSNVLIPNLEWTGFLDVSSIH 211 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEA---l-SrGa~~V~~VD~n~-------------------~Al~~~a~~N~~~~g~~~~~~vi 211 (299)
.+.+|+=+||| .+|.++ | ..|..+++.+|.+. ..+ +.+.+.+...+-.-.++.+
T Consensus 30 ~~~~VlVvG~G--g~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka-~~~~~~l~~~np~~~v~~~ 106 (249)
T 1jw9_B 30 KDSRVLIVGLG--GLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKV-ESARDALTRINPHIAITPV 106 (249)
T ss_dssp HHCEEEEECCS--HHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHH-HHHHHHHHHHCTTSEEEEE
T ss_pred hCCeEEEEeeC--HHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHH-HHHHHHHHHHCCCcEEEEE
Confidence 35788888765 445443 3 35888999999996 444 6777777665432234444
Q ss_pred Ecchhh-HHHHHhhhcCCCCCeeEEEEcC
Q 022298 212 TVRVET-FLERAEQFVGKDGPFDYMSVTP 239 (299)
Q Consensus 212 ~~D~~~-~l~~~~~~~~~~~~fDlI~iDP 239 (299)
..++.. .+... -..||+|+.--
T Consensus 107 ~~~~~~~~~~~~------~~~~DvVi~~~ 129 (249)
T 1jw9_B 107 NALLDDAELAAL------IAEHDLVLDCT 129 (249)
T ss_dssp CSCCCHHHHHHH------HHTSSEEEECC
T ss_pred eccCCHhHHHHH------HhCCCEEEEeC
Confidence 433321 11111 13689888543
No 383
>2g1p_A DNA adenine methylase; DAM methylation, GATC recognition, base flipping, bacterial factor, transferase-DNA complex; HET: DNA SAH; 1.89A {Escherichia coli} PDB: 2ore_D*
Probab=73.00 E-value=2.2 Score=38.55 Aligned_cols=29 Identities=17% Similarity=0.204 Sum_probs=20.8
Q ss_pred cEEEEEcchhhHHHHHhhhcCCCCCeeEEEEcCCCC
Q 022298 207 VSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYT 242 (299)
Q Consensus 207 ~~~vi~~D~~~~l~~~~~~~~~~~~fDlI~iDPPY~ 242 (299)
++++.+.|..+++... ..=|+|++||||.
T Consensus 157 ~v~i~~~Df~~~i~~~-------~~~~fvY~DPPY~ 185 (278)
T 2g1p_A 157 NAFFYCESYADSMARA-------DDSSVVYCDPPYA 185 (278)
T ss_dssp GEEEEECCHHHHHTTC-------CTTEEEEECCSCC
T ss_pred CcEEEeCCHHHHHHhc-------CCCCEEEeCCccc
Confidence 3577788877776432 2448999999995
No 384
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=72.99 E-value=5.1 Score=36.90 Aligned_cols=43 Identities=16% Similarity=0.141 Sum_probs=31.4
Q ss_pred CCCEEEEECCccchHHHHHH----HcCCCEEEEEeCCHHHHHHHHHHHHHHhCC
Q 022298 155 RPGRWLDLYSGTGSVGIEAI----SRGCSEVHFVEMDPWVVSNVLIPNLEWTGF 204 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAl----SrGa~~V~~VD~n~~Al~~~a~~N~~~~g~ 204 (299)
.+.+||-.+| |.+|+.++ .+|+.+|+++|.+++.+ +.++ .+|.
T Consensus 191 ~g~~VlV~Ga--G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~-~~~~----~lGa 237 (374)
T 2jhf_A 191 QGSTCAVFGL--GGVGLSVIMGCKAAGAARIIGVDINKDKF-AKAK----EVGA 237 (374)
T ss_dssp TTCEEEEECC--SHHHHHHHHHHHHTTCSEEEEECSCGGGH-HHHH----HTTC
T ss_pred CCCEEEEECC--CHHHHHHHHHHHHcCCCeEEEEcCCHHHH-HHHH----HhCC
Confidence 5788998875 56666543 36887899999999886 6664 3565
No 385
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=72.95 E-value=18 Score=31.67 Aligned_cols=83 Identities=13% Similarity=0.065 Sum_probs=49.2
Q ss_pred CCCCEEEEECCccchHHHH----HHHcCCCEEEEEeCC----------------HHHHHHHHHHHHHHhCCCCcEEEEEc
Q 022298 154 LRPGRWLDLYSGTGSVGIE----AISRGCSEVHFVEMD----------------PWVVSNVLIPNLEWTGFLDVSSIHTV 213 (299)
Q Consensus 154 ~~~~~VLDLfaGSGalgIE----AlSrGa~~V~~VD~n----------------~~Al~~~a~~N~~~~g~~~~~~vi~~ 213 (299)
+.++++|=-|+++| +|.+ ++.+|+ +|+.+|.+ .+.+ +.+.+.++..+ .++.++.+
T Consensus 9 l~~k~~lVTGas~g-IG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~ 83 (286)
T 3uve_A 9 VEGKVAFVTGAARG-QGRSHAVRLAQEGA-DIIAVDICKPIRAGVVDTAIPASTPEDL-AETADLVKGHN--RRIVTAEV 83 (286)
T ss_dssp TTTCEEEEESTTSH-HHHHHHHHHHHTTC-EEEEEECCSCSBTTBCCCSSCCCCHHHH-HHHHHHHHTTT--CCEEEEEC
T ss_pred cCCCEEEEeCCCch-HHHHHHHHHHHCCC-eEEEEeccccccccccccccccCCHHHH-HHHHHHHhhcC--CceEEEEc
Confidence 46778887776654 4544 446787 59999987 5554 44444444433 35788888
Q ss_pred chhhHHHH--H-hhhcCCCCCeeEEEEcCCC
Q 022298 214 RVETFLER--A-EQFVGKDGPFDYMSVTPPY 241 (299)
Q Consensus 214 D~~~~l~~--~-~~~~~~~~~fDlI~iDPPY 241 (299)
|+.+...- . .......++.|+++.+.-+
T Consensus 84 Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~ 114 (286)
T 3uve_A 84 DVRDYDALKAAVDSGVEQLGRLDIIVANAGI 114 (286)
T ss_dssp CTTCHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred CCCCHHHHHHHHHHHHHHhCCCCEEEECCcc
Confidence 87643211 1 0011112478999987644
No 386
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=72.51 E-value=16 Score=32.09 Aligned_cols=82 Identities=18% Similarity=0.147 Sum_probs=49.8
Q ss_pred CCCEEEEECCccchHHHH----HHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHH---HhhhcC
Q 022298 155 RPGRWLDLYSGTGSVGIE----AISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLER---AEQFVG 227 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIE----AlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~---~~~~~~ 227 (299)
.++++|=-|++ |.+|.+ ++.+|+ +|+.++.+...+ +.+.+.++..+ .++.++.+|+.+...- ......
T Consensus 23 ~~k~~lVTGas-~GIG~aia~~la~~G~-~V~~~~r~~~~~-~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~ 97 (279)
T 3sju_A 23 RPQTAFVTGVS-SGIGLAVARTLAARGI-AVYGCARDAKNV-SAAVDGLRAAG--HDVDGSSCDVTSTDEVHAAVAAAVE 97 (279)
T ss_dssp --CEEEEESTT-SHHHHHHHHHHHHTTC-EEEEEESCHHHH-HHHHHHHHTTT--CCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-CHHHHHHHHHHHHCCC-EEEEEeCCHHHH-HHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHHH
Confidence 35677766654 555654 345787 599999999886 66666665544 3478888887643211 010111
Q ss_pred CCCCeeEEEEcCCC
Q 022298 228 KDGPFDYMSVTPPY 241 (299)
Q Consensus 228 ~~~~fDlI~iDPPY 241 (299)
..++.|+++.+.-.
T Consensus 98 ~~g~id~lv~nAg~ 111 (279)
T 3sju_A 98 RFGPIGILVNSAGR 111 (279)
T ss_dssp HHCSCCEEEECCCC
T ss_pred HcCCCcEEEECCCC
Confidence 12578999987644
No 387
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=72.51 E-value=3.8 Score=37.88 Aligned_cols=44 Identities=16% Similarity=0.121 Sum_probs=31.4
Q ss_pred CCCEEEEECCccchHHHHHH----HcCCCEEEEEeCCHHHHHHHHHHHHHHhCCC
Q 022298 155 RPGRWLDLYSGTGSVGIEAI----SRGCSEVHFVEMDPWVVSNVLIPNLEWTGFL 205 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAl----SrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~ 205 (299)
.+.+||=.|| |.+|+.++ .+|+.+|+++|.+++.+ +.++ .+|..
T Consensus 193 ~g~~VlV~Ga--G~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~-~~a~----~lGa~ 240 (378)
T 3uko_A 193 PGSNVAIFGL--GTVGLAVAEGAKTAGASRIIGIDIDSKKY-ETAK----KFGVN 240 (378)
T ss_dssp TTCCEEEECC--SHHHHHHHHHHHHHTCSCEEEECSCTTHH-HHHH----TTTCC
T ss_pred CCCEEEEECC--CHHHHHHHHHHHHcCCCeEEEEcCCHHHH-HHHH----HcCCc
Confidence 5778888876 56666543 36987899999998876 6654 46653
No 388
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=72.46 E-value=18 Score=32.78 Aligned_cols=79 Identities=13% Similarity=0.032 Sum_probs=51.4
Q ss_pred CCCCEEEEECCccchHHHHHH----Hc-CCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCC
Q 022298 154 LRPGRWLDLYSGTGSVGIEAI----SR-GCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGK 228 (299)
Q Consensus 154 ~~~~~VLDLfaGSGalgIEAl----Sr-Ga~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~ 228 (299)
..+.+|| +-.|||.+|-+.+ .+ |..+|++++.++... ..+.+.+ . ..+++++.+|+.+...... .
T Consensus 19 ~~~k~vl-VTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~-~~~~~~~---~-~~~v~~~~~Dl~d~~~l~~-~--- 88 (344)
T 2gn4_A 19 LDNQTIL-ITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQ-SEMAMEF---N-DPRMRFFIGDVRDLERLNY-A--- 88 (344)
T ss_dssp TTTCEEE-EETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHH-HHHHHHH---C-CTTEEEEECCTTCHHHHHH-H---
T ss_pred hCCCEEE-EECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhH-HHHHHHh---c-CCCEEEEECCCCCHHHHHH-H---
Confidence 3467777 5567888887643 46 776899999998765 5454433 2 1357889999876432111 1
Q ss_pred CCCeeEEEEcCCCC
Q 022298 229 DGPFDYMSVTPPYT 242 (299)
Q Consensus 229 ~~~fDlI~iDPPY~ 242 (299)
-..+|+||..-...
T Consensus 89 ~~~~D~Vih~Aa~~ 102 (344)
T 2gn4_A 89 LEGVDICIHAAALK 102 (344)
T ss_dssp TTTCSEEEECCCCC
T ss_pred HhcCCEEEECCCCC
Confidence 14689999876543
No 389
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=72.45 E-value=4.9 Score=36.92 Aligned_cols=43 Identities=19% Similarity=0.080 Sum_probs=31.5
Q ss_pred CCCEEEEECCccchHHHHHH----HcCCCEEEEEeCCHHHHHHHHHHHHHHhCC
Q 022298 155 RPGRWLDLYSGTGSVGIEAI----SRGCSEVHFVEMDPWVVSNVLIPNLEWTGF 204 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAl----SrGa~~V~~VD~n~~Al~~~a~~N~~~~g~ 204 (299)
.+.+||-.+| |.+|+.++ .+|+.+|+++|.+++.. +.++ .+|.
T Consensus 190 ~g~~VlV~Ga--G~vG~~avqla~~~Ga~~Vi~~~~~~~~~-~~~~----~lGa 236 (373)
T 2fzw_A 190 PGSVCAVFGL--GGVGLAVIMGCKVAGASRIIGVDINKDKF-ARAK----EFGA 236 (373)
T ss_dssp TTCEEEEECC--SHHHHHHHHHHHHHTCSEEEEECSCGGGH-HHHH----HHTC
T ss_pred CCCEEEEECC--CHHHHHHHHHHHHcCCCeEEEEcCCHHHH-HHHH----HcCC
Confidence 5789998875 56666544 36887899999999886 6664 3565
No 390
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=72.40 E-value=15 Score=32.24 Aligned_cols=81 Identities=11% Similarity=0.056 Sum_probs=49.6
Q ss_pred CCEEEEECCccchHHHHH----HHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHH--HH-hhhcCC
Q 022298 156 PGRWLDLYSGTGSVGIEA----ISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLE--RA-EQFVGK 228 (299)
Q Consensus 156 ~~~VLDLfaGSGalgIEA----lSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~--~~-~~~~~~ 228 (299)
++++|=-|+ +|.+|.+. +.+|+ +|+.++.+.+.+ +.+.+.++..+ .++.++.+|+.+... .. ......
T Consensus 4 ~k~~lVTGa-s~GIG~aia~~la~~G~-~V~~~~r~~~~~-~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~ 78 (264)
T 3tfo_A 4 DKVILITGA-SGGIGEGIARELGVAGA-KILLGARRQARI-EAIATEIRDAG--GTALAQVLDVTDRHSVAAFAQAAVDT 78 (264)
T ss_dssp TCEEEESST-TSHHHHHHHHHHHHTTC-EEEEEESSHHHH-HHHHHHHHHTT--CEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEeCC-ccHHHHHHHHHHHHCCC-EEEEEECCHHHH-HHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 556665554 45556543 45787 599999999887 66766666654 346778888754321 11 001111
Q ss_pred CCCeeEEEEcCCC
Q 022298 229 DGPFDYMSVTPPY 241 (299)
Q Consensus 229 ~~~fDlI~iDPPY 241 (299)
.++.|+++.+.-.
T Consensus 79 ~g~iD~lVnnAG~ 91 (264)
T 3tfo_A 79 WGRIDVLVNNAGV 91 (264)
T ss_dssp HSCCCEEEECCCC
T ss_pred cCCCCEEEECCCC
Confidence 2578999987643
No 391
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=72.38 E-value=6 Score=36.02 Aligned_cols=75 Identities=13% Similarity=0.046 Sum_probs=43.3
Q ss_pred CCCEEEEECCccchHHHHHH----HcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCC
Q 022298 155 RPGRWLDLYSGTGSVGIEAI----SRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDG 230 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAl----SrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~ 230 (299)
.+.+||-.|+ |.+|+.++ .+|+.+|+++|.+++.. +.++ .+|.. .++..+-.++......+. ...
T Consensus 167 ~g~~VlV~Ga--G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~-~~~~----~~Ga~---~~~~~~~~~~~~~v~~~~-~g~ 235 (348)
T 2d8a_A 167 SGKSVLITGA--GPLGLLGIAVAKASGAYPVIVSEPSDFRR-ELAK----KVGAD---YVINPFEEDVVKEVMDIT-DGN 235 (348)
T ss_dssp TTCCEEEECC--SHHHHHHHHHHHHTTCCSEEEECSCHHHH-HHHH----HHTCS---EEECTTTSCHHHHHHHHT-TTS
T ss_pred CCCEEEEECC--CHHHHHHHHHHHHcCCCEEEEECCCHHHH-HHHH----HhCCC---EEECCCCcCHHHHHHHHc-CCC
Confidence 6789999987 56665543 36886799999998876 6664 35642 123221122222111111 124
Q ss_pred CeeEEEEcCC
Q 022298 231 PFDYMSVTPP 240 (299)
Q Consensus 231 ~fDlI~iDPP 240 (299)
.+|+||-.-.
T Consensus 236 g~D~vid~~g 245 (348)
T 2d8a_A 236 GVDVFLEFSG 245 (348)
T ss_dssp CEEEEEECSC
T ss_pred CCCEEEECCC
Confidence 6999886543
No 392
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=72.20 E-value=7.2 Score=36.43 Aligned_cols=43 Identities=23% Similarity=0.205 Sum_probs=31.8
Q ss_pred CCCEEEEECCccchHHHHHH----HcCCCEEEEEeCCHHHHHHHHHHHHHHhCC
Q 022298 155 RPGRWLDLYSGTGSVGIEAI----SRGCSEVHFVEMDPWVVSNVLIPNLEWTGF 204 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAl----SrGa~~V~~VD~n~~Al~~~a~~N~~~~g~ 204 (299)
.+.+||=.|| |.+|+.++ .+|+.+|+++|.+++.. +.++ .+|.
T Consensus 213 ~g~~VlV~Ga--G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~-~~~~----~lGa 259 (404)
T 3ip1_A 213 PGDNVVILGG--GPIGLAAVAILKHAGASKVILSEPSEVRR-NLAK----ELGA 259 (404)
T ss_dssp TTCEEEEECC--SHHHHHHHHHHHHTTCSEEEEECSCHHHH-HHHH----HHTC
T ss_pred CCCEEEEECC--CHHHHHHHHHHHHcCCCEEEEECCCHHHH-HHHH----HcCC
Confidence 5778888765 66776654 36988899999999886 6664 3564
No 393
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=72.07 E-value=14 Score=31.15 Aligned_cols=75 Identities=9% Similarity=-0.003 Sum_probs=43.8
Q ss_pred EEEECCccchHHHHH----HHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCeeE
Q 022298 159 WLDLYSGTGSVGIEA----ISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDY 234 (299)
Q Consensus 159 VLDLfaGSGalgIEA----lSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fDl 234 (299)
+|=-| |+|.+|.+. +.+|+. |+.++.++..+ +.+.+.+ ..++.++.+|+.+...-...+......+|+
T Consensus 4 vlVTG-as~gIG~~~a~~l~~~G~~-V~~~~r~~~~~-~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~~~~d~ 75 (230)
T 3guy_A 4 IVITG-ASSGLGAELAKLYDAEGKA-TYLTGRSESKL-STVTNCL-----SNNVGYRARDLASHQEVEQLFEQLDSIPST 75 (230)
T ss_dssp EEEES-TTSHHHHHHHHHHHHTTCC-EEEEESCHHHH-HHHHHTC-----SSCCCEEECCTTCHHHHHHHHHSCSSCCSE
T ss_pred EEEec-CCchHHHHHHHHHHHCCCE-EEEEeCCHHHH-HHHHHHH-----hhccCeEeecCCCHHHHHHHHHHHhhcCCE
Confidence 44344 456666553 457885 99999998876 5443332 234667888876543211111222345699
Q ss_pred EEEcCCC
Q 022298 235 MSVTPPY 241 (299)
Q Consensus 235 I~iDPPY 241 (299)
++.+.-.
T Consensus 76 lv~~Ag~ 82 (230)
T 3guy_A 76 VVHSAGS 82 (230)
T ss_dssp EEECCCC
T ss_pred EEEeCCc
Confidence 9987754
No 394
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=71.97 E-value=6.6 Score=36.16 Aligned_cols=43 Identities=19% Similarity=0.134 Sum_probs=31.5
Q ss_pred CCCEEEEECCccchHHHHHH----HcCCCEEEEEeCCHHHHHHHHHHHHHHhCC
Q 022298 155 RPGRWLDLYSGTGSVGIEAI----SRGCSEVHFVEMDPWVVSNVLIPNLEWTGF 204 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAl----SrGa~~V~~VD~n~~Al~~~a~~N~~~~g~ 204 (299)
.+.+||-.|| |.+|+.++ .+|+.+|+++|.+++.. +.++ .+|.
T Consensus 195 ~g~~VlV~Ga--G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~-~~a~----~lGa 241 (376)
T 1e3i_A 195 PGSTCAVFGL--GCVGLSAIIGCKIAGASRIIAIDINGEKF-PKAK----ALGA 241 (376)
T ss_dssp TTCEEEEECC--SHHHHHHHHHHHHTTCSEEEEECSCGGGH-HHHH----HTTC
T ss_pred CCCEEEEECC--CHHHHHHHHHHHHcCCCeEEEEcCCHHHH-HHHH----HhCC
Confidence 5789998875 56666543 36887899999999876 6654 3565
No 395
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=71.90 E-value=14 Score=32.84 Aligned_cols=83 Identities=17% Similarity=0.078 Sum_probs=50.5
Q ss_pred CCCCEEEEECCccchHHHH----HHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHH---hhhc
Q 022298 154 LRPGRWLDLYSGTGSVGIE----AISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERA---EQFV 226 (299)
Q Consensus 154 ~~~~~VLDLfaGSGalgIE----AlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~---~~~~ 226 (299)
+.++++|=-|+ +|.+|.+ ++.+|+ +|+.++.+...+ +.+.+.++..+. .++.++.+|+.+...-. ....
T Consensus 39 l~~k~vlVTGa-s~GIG~aia~~la~~G~-~V~~~~r~~~~~-~~~~~~l~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~ 114 (293)
T 3rih_A 39 LSARSVLVTGG-TKGIGRGIATVFARAGA-NVAVAARSPREL-SSVTAELGELGA-GNVIGVRLDVSDPGSCADAARTVV 114 (293)
T ss_dssp CTTCEEEETTT-TSHHHHHHHHHHHHTTC-EEEEEESSGGGG-HHHHHHHTTSSS-SCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEeCC-CcHHHHHHHHHHHHCCC-EEEEEECCHHHH-HHHHHHHHhhCC-CcEEEEEEeCCCHHHHHHHHHHHH
Confidence 45667775554 5556655 345788 699999998876 666555544432 35788889876542110 0011
Q ss_pred CCCCCeeEEEEcCC
Q 022298 227 GKDGPFDYMSVTPP 240 (299)
Q Consensus 227 ~~~~~fDlI~iDPP 240 (299)
...++.|+++.+.-
T Consensus 115 ~~~g~iD~lvnnAg 128 (293)
T 3rih_A 115 DAFGALDVVCANAG 128 (293)
T ss_dssp HHHSCCCEEEECCC
T ss_pred HHcCCCCEEEECCC
Confidence 11257899998764
No 396
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=71.87 E-value=34 Score=29.66 Aligned_cols=83 Identities=11% Similarity=-0.002 Sum_probs=50.5
Q ss_pred CCCCEEEEECCccchHHHHH----HHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHH--H-hhhc
Q 022298 154 LRPGRWLDLYSGTGSVGIEA----ISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLER--A-EQFV 226 (299)
Q Consensus 154 ~~~~~VLDLfaGSGalgIEA----lSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~--~-~~~~ 226 (299)
+.+.++|=-|+ +|.+|.+. +.+|+ +|+.++.++..+ +.+.+.++..+ .++.++.+|+.+...- . ....
T Consensus 19 l~~k~vlVTGa-s~gIG~aia~~l~~~G~-~V~~~~r~~~~~-~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~ 93 (273)
T 1ae1_A 19 LKGTTALVTGG-SKGIGYAIVEELAGLGA-RVYTCSRNEKEL-DECLEIWREKG--LNVEGSVCDLLSRTERDKLMQTVA 93 (273)
T ss_dssp CTTCEEEEESC-SSHHHHHHHHHHHHTTC-EEEEEESCHHHH-HHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEECC-cchHHHHHHHHHHHCCC-EEEEEeCCHHHH-HHHHHHHHhcC--CceEEEECCCCCHHHHHHHHHHHH
Confidence 45677776665 55666553 45687 699999998876 55555555444 2477888887543211 1 0011
Q ss_pred CCC-CCeeEEEEcCCC
Q 022298 227 GKD-GPFDYMSVTPPY 241 (299)
Q Consensus 227 ~~~-~~fDlI~iDPPY 241 (299)
... +..|+++.+.-.
T Consensus 94 ~~~~g~id~lv~nAg~ 109 (273)
T 1ae1_A 94 HVFDGKLNILVNNAGV 109 (273)
T ss_dssp HHTTSCCCEEEECCCC
T ss_pred HHcCCCCcEEEECCCC
Confidence 112 578999987643
No 397
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=71.78 E-value=20 Score=31.20 Aligned_cols=83 Identities=11% Similarity=0.037 Sum_probs=49.8
Q ss_pred CCCCEEEEECCccchHHHH----HHHcCCCEEEEEeC-------------CHHHHHHHHHHHHHHhCCCCcEEEEEcchh
Q 022298 154 LRPGRWLDLYSGTGSVGIE----AISRGCSEVHFVEM-------------DPWVVSNVLIPNLEWTGFLDVSSIHTVRVE 216 (299)
Q Consensus 154 ~~~~~VLDLfaGSGalgIE----AlSrGa~~V~~VD~-------------n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~ 216 (299)
+.++++|=-|+++ .+|.+ ++.+|+ +|+.+|. +.+.+ +.+.+.++..+ .++.++.+|+.
T Consensus 13 l~gk~~lVTGas~-gIG~a~a~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~Dv~ 87 (280)
T 3pgx_A 13 LQGRVAFITGAAR-GQGRSHAVRLAAEGA-DIIACDICAPVSASVTYAPASPEDL-DETARLVEDQG--RKALTRVLDVR 87 (280)
T ss_dssp TTTCEEEEESTTS-HHHHHHHHHHHHTTC-EEEEEECCSCCCTTCCSCCCCHHHH-HHHHHHHHTTT--CCEEEEECCTT
T ss_pred cCCCEEEEECCCc-HHHHHHHHHHHHCCC-EEEEEeccccccccccccccCHHHH-HHHHHHHHhcC--CeEEEEEcCCC
Confidence 4677788776654 45554 446787 6999998 66665 55555555444 34778888875
Q ss_pred hHHHH--H-hhhcCCCCCeeEEEEcCCC
Q 022298 217 TFLER--A-EQFVGKDGPFDYMSVTPPY 241 (299)
Q Consensus 217 ~~l~~--~-~~~~~~~~~fDlI~iDPPY 241 (299)
+...- . .......++.|+++.+.-.
T Consensus 88 ~~~~v~~~~~~~~~~~g~id~lvnnAg~ 115 (280)
T 3pgx_A 88 DDAALRELVADGMEQFGRLDVVVANAGV 115 (280)
T ss_dssp CHHHHHHHHHHHHHHHCCCCEEEECCCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCC
Confidence 43211 0 0001112578999987644
No 398
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=71.71 E-value=24 Score=31.29 Aligned_cols=82 Identities=13% Similarity=0.067 Sum_probs=50.0
Q ss_pred CCCCEEEEECCccchHHHHH----HHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHH--H-Hhhhc
Q 022298 154 LRPGRWLDLYSGTGSVGIEA----ISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLE--R-AEQFV 226 (299)
Q Consensus 154 ~~~~~VLDLfaGSGalgIEA----lSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~--~-~~~~~ 226 (299)
+.++++|=-|+ +|.+|.+. +.+|+ +|++++.++..+ +.+.+.++..+ .++.++.+|+.+... . .....
T Consensus 32 l~~k~vlVTGa-s~gIG~aia~~L~~~G~-~V~~~~r~~~~~-~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~ 106 (291)
T 3cxt_A 32 LKGKIALVTGA-SYGIGFAIASAYAKAGA-TIVFNDINQELV-DRGMAAYKAAG--INAHGYVCDVTDEDGIQAMVAQIE 106 (291)
T ss_dssp CTTCEEEEETC-SSHHHHHHHHHHHHTTC-EEEEEESSHHHH-HHHHHHHHHTT--CCCEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEeCC-CcHHHHHHHHHHHHCCC-EEEEEeCCHHHH-HHHHHHHHhcC--CeEEEEEecCCCHHHHHHHHHHHH
Confidence 45677776654 56666553 45687 699999998876 66656665544 236678888764321 1 11111
Q ss_pred CCCCCeeEEEEcCC
Q 022298 227 GKDGPFDYMSVTPP 240 (299)
Q Consensus 227 ~~~~~fDlI~iDPP 240 (299)
...+..|+++.+.=
T Consensus 107 ~~~g~iD~lvnnAg 120 (291)
T 3cxt_A 107 SEVGIIDILVNNAG 120 (291)
T ss_dssp HHTCCCCEEEECCC
T ss_pred HHcCCCcEEEECCC
Confidence 11256899997753
No 399
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=71.70 E-value=11 Score=33.29 Aligned_cols=84 Identities=13% Similarity=-0.019 Sum_probs=49.0
Q ss_pred CCCCEEEEECCccchHHHHH----HHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHH---hhhc
Q 022298 154 LRPGRWLDLYSGTGSVGIEA----ISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERA---EQFV 226 (299)
Q Consensus 154 ~~~~~VLDLfaGSGalgIEA----lSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~---~~~~ 226 (299)
+.++++|=-| |+|.+|.+. +.+|+ +|+.++.+...+ +.+.+.+...+- ..+.++.+|+.+...-. ....
T Consensus 31 l~gk~~lVTG-as~GIG~aia~~la~~G~-~V~~~~r~~~~~-~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~ 106 (281)
T 4dry_A 31 GEGRIALVTG-GGTGVGRGIAQALSAEGY-SVVITGRRPDVL-DAAAGEIGGRTG-NIVRAVVCDVGDPDQVAALFAAVR 106 (281)
T ss_dssp ---CEEEETT-TTSHHHHHHHHHHHHTTC-EEEEEESCHHHH-HHHHHHHHHHHS-SCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEeC-CCCHHHHHHHHHHHHCCC-EEEEEECCHHHH-HHHHHHHHhcCC-CeEEEEEcCCCCHHHHHHHHHHHH
Confidence 3566777555 456666553 45687 699999999886 666666654432 23578888876442110 0011
Q ss_pred CCCCCeeEEEEcCCC
Q 022298 227 GKDGPFDYMSVTPPY 241 (299)
Q Consensus 227 ~~~~~fDlI~iDPPY 241 (299)
...++.|+++.+.=.
T Consensus 107 ~~~g~iD~lvnnAG~ 121 (281)
T 4dry_A 107 AEFARLDLLVNNAGS 121 (281)
T ss_dssp HHHSCCSEEEECCCC
T ss_pred HHcCCCCEEEECCCC
Confidence 112578999987643
No 400
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=71.55 E-value=21 Score=30.50 Aligned_cols=80 Identities=18% Similarity=0.119 Sum_probs=48.3
Q ss_pred CCCCEEEEECCccchHHHH----HHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHH---Hhhhc
Q 022298 154 LRPGRWLDLYSGTGSVGIE----AISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLER---AEQFV 226 (299)
Q Consensus 154 ~~~~~VLDLfaGSGalgIE----AlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~---~~~~~ 226 (299)
+.+.++|=-|+++ .+|.+ ++.+|+ +|+.++.++..+ +.+.+. ++ .++.++.+|+.+...- .....
T Consensus 7 l~~k~vlITGas~-gIG~~~a~~l~~~G~-~V~~~~r~~~~~-~~~~~~---~~--~~~~~~~~D~~~~~~~~~~~~~~~ 78 (261)
T 3n74_A 7 LEGKVALITGAGS-GFGEGMAKRFAKGGA-KVVIVDRDKAGA-ERVAGE---IG--DAALAVAADISKEADVDAAVEAAL 78 (261)
T ss_dssp TTTCEEEEETTTS-HHHHHHHHHHHHTTC-EEEEEESCHHHH-HHHHHH---HC--TTEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCc-hHHHHHHHHHHHCCC-EEEEEcCCHHHH-HHHHHH---hC--CceEEEEecCCCHHHHHHHHHHHH
Confidence 4577888776654 44544 456787 599999998876 544443 33 3477888887643211 11011
Q ss_pred CCCCCeeEEEEcCCC
Q 022298 227 GKDGPFDYMSVTPPY 241 (299)
Q Consensus 227 ~~~~~fDlI~iDPPY 241 (299)
...++.|+++.+.-.
T Consensus 79 ~~~g~id~li~~Ag~ 93 (261)
T 3n74_A 79 SKFGKVDILVNNAGI 93 (261)
T ss_dssp HHHSCCCEEEECCCC
T ss_pred HhcCCCCEEEECCcc
Confidence 112478999987644
No 401
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=71.49 E-value=20 Score=30.90 Aligned_cols=82 Identities=12% Similarity=0.145 Sum_probs=50.0
Q ss_pred CCCCEEEEECCccchHHHHH----HHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHH---Hhhhc
Q 022298 154 LRPGRWLDLYSGTGSVGIEA----ISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLER---AEQFV 226 (299)
Q Consensus 154 ~~~~~VLDLfaGSGalgIEA----lSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~---~~~~~ 226 (299)
+.++++|=.|+ +|.+|.+. +.+|+ +|+.++.++..+ +.+.+.++..+ .++.++.+|+.+...- .....
T Consensus 5 l~~k~vlVTGa-s~gIG~~ia~~l~~~G~-~V~~~~r~~~~~-~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~ 79 (262)
T 1zem_A 5 FNGKVCLVTGA-GGNIGLATALRLAEEGT-AIALLDMNREAL-EKAEASVREKG--VEARSYVCDVTSEEAVIGTVDSVV 79 (262)
T ss_dssp TTTCEEEEETT-TSHHHHHHHHHHHHTTC-EEEEEESCHHHH-HHHHHHHHTTT--SCEEEEECCTTCHHHHHHHHHHHH
T ss_pred cCCCEEEEeCC-CcHHHHHHHHHHHHCCC-EEEEEeCCHHHH-HHHHHHHHhcC--CcEEEEEecCCCHHHHHHHHHHHH
Confidence 45677775555 55566553 45787 599999998876 66666555443 3477888887643211 00011
Q ss_pred CCCCCeeEEEEcCC
Q 022298 227 GKDGPFDYMSVTPP 240 (299)
Q Consensus 227 ~~~~~fDlI~iDPP 240 (299)
...+..|+++.+.-
T Consensus 80 ~~~g~id~lv~nAg 93 (262)
T 1zem_A 80 RDFGKIDFLFNNAG 93 (262)
T ss_dssp HHHSCCCEEEECCC
T ss_pred HHhCCCCEEEECCC
Confidence 11247899998763
No 402
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=71.42 E-value=23 Score=30.78 Aligned_cols=83 Identities=13% Similarity=0.078 Sum_probs=49.5
Q ss_pred CCCCEEEEECCccchHHHH----HHHcCCCEEEEEeC-------------CHHHHHHHHHHHHHHhCCCCcEEEEEcchh
Q 022298 154 LRPGRWLDLYSGTGSVGIE----AISRGCSEVHFVEM-------------DPWVVSNVLIPNLEWTGFLDVSSIHTVRVE 216 (299)
Q Consensus 154 ~~~~~VLDLfaGSGalgIE----AlSrGa~~V~~VD~-------------n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~ 216 (299)
+.++++|=-|+++ .+|.+ ++.+|+ +|+.+|. +.+.+ +.+.+.++..+ .++.++.+|+.
T Consensus 9 l~~k~~lVTGas~-GIG~a~a~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~D~~ 83 (277)
T 3tsc_A 9 LEGRVAFITGAAR-GQGRAHAVRMAAEGA-DIIAVDIAGKLPSCVPYDPASPDDL-SETVRLVEAAN--RRIVAAVVDTR 83 (277)
T ss_dssp TTTCEEEEESTTS-HHHHHHHHHHHHTTC-EEEEEECCSCCCTTCCSCCCCHHHH-HHHHHHHHHTT--CCEEEEECCTT
T ss_pred cCCCEEEEECCcc-HHHHHHHHHHHHcCC-EEEEEeccccccccccccccCHHHH-HHHHHHHHhcC--CeEEEEECCCC
Confidence 4577888776654 45544 446788 6999998 56665 55555555444 34778888876
Q ss_pred hHHHHH---hhhcCCCCCeeEEEEcCCC
Q 022298 217 TFLERA---EQFVGKDGPFDYMSVTPPY 241 (299)
Q Consensus 217 ~~l~~~---~~~~~~~~~fDlI~iDPPY 241 (299)
+...-. .......++.|+++.+.-.
T Consensus 84 ~~~~v~~~~~~~~~~~g~id~lvnnAg~ 111 (277)
T 3tsc_A 84 DFDRLRKVVDDGVAALGRLDIIVANAGV 111 (277)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCC
Confidence 542111 0011112578999987644
No 403
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=71.11 E-value=30 Score=29.26 Aligned_cols=80 Identities=16% Similarity=0.113 Sum_probs=48.6
Q ss_pred CCCCEEEEECCccchHHHHH----HHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCC
Q 022298 154 LRPGRWLDLYSGTGSVGIEA----ISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKD 229 (299)
Q Consensus 154 ~~~~~VLDLfaGSGalgIEA----lSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~ 229 (299)
..+.++|=-| |+|.+|.+. +.+|+ +|+.++.+...+ +.+.+.+ . .++.++.+|+.+...-. .+....
T Consensus 12 ~~~k~vlVTG-as~gIG~~~a~~l~~~G~-~V~~~~r~~~~~-~~~~~~~---~--~~~~~~~~D~~~~~~~~-~~~~~~ 82 (249)
T 3f9i_A 12 LTGKTSLITG-ASSGIGSAIARLLHKLGS-KVIISGSNEEKL-KSLGNAL---K--DNYTIEVCNLANKEECS-NLISKT 82 (249)
T ss_dssp CTTCEEEETT-TTSHHHHHHHHHHHHTTC-EEEEEESCHHHH-HHHHHHH---C--SSEEEEECCTTSHHHHH-HHHHTC
T ss_pred CCCCEEEEEC-CCChHHHHHHHHHHHCCC-EEEEEcCCHHHH-HHHHHHh---c--cCccEEEcCCCCHHHHH-HHHHhc
Confidence 4677888555 456666553 45787 699999998876 5444333 2 34778888876543211 111223
Q ss_pred CCeeEEEEcCCCC
Q 022298 230 GPFDYMSVTPPYT 242 (299)
Q Consensus 230 ~~fDlI~iDPPY~ 242 (299)
+..|+++.+.-..
T Consensus 83 ~~id~li~~Ag~~ 95 (249)
T 3f9i_A 83 SNLDILVCNAGIT 95 (249)
T ss_dssp SCCSEEEECCC--
T ss_pred CCCCEEEECCCCC
Confidence 5789999877543
No 404
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=71.09 E-value=23 Score=30.79 Aligned_cols=83 Identities=12% Similarity=0.001 Sum_probs=49.3
Q ss_pred CCCCEEEEECCccchHHHH----HHHcCCCEEEEEeCC------------HHHHHHHHHHHHHHhCCCCcEEEEEcchhh
Q 022298 154 LRPGRWLDLYSGTGSVGIE----AISRGCSEVHFVEMD------------PWVVSNVLIPNLEWTGFLDVSSIHTVRVET 217 (299)
Q Consensus 154 ~~~~~VLDLfaGSGalgIE----AlSrGa~~V~~VD~n------------~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~ 217 (299)
+.++++|=-|++ |.+|.+ ++.+|+ +|+.+|.+ .+.+ +.+.+.++..+ .++.++.+|+.+
T Consensus 8 l~~k~~lVTGas-~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~Dv~~ 82 (281)
T 3s55_A 8 FEGKTALITGGA-RGMGRSHAVALAEAGA-DIAICDRCENSDVVGYPLATADDL-AETVALVEKTG--RRCISAKVDVKD 82 (281)
T ss_dssp TTTCEEEEETTT-SHHHHHHHHHHHHTTC-EEEEEECCSCCTTCSSCCCCHHHH-HHHHHHHHHTT--CCEEEEECCTTC
T ss_pred cCCCEEEEeCCC-chHHHHHHHHHHHCCC-eEEEEeCCccccccccccccHHHH-HHHHHHHHhcC--CeEEEEeCCCCC
Confidence 467788877665 455654 346787 59999987 4554 44445555554 347888888765
Q ss_pred HHHH--H-hhhcCCCCCeeEEEEcCCC
Q 022298 218 FLER--A-EQFVGKDGPFDYMSVTPPY 241 (299)
Q Consensus 218 ~l~~--~-~~~~~~~~~fDlI~iDPPY 241 (299)
...- . .......++.|+++.+.-.
T Consensus 83 ~~~v~~~~~~~~~~~g~id~lv~nAg~ 109 (281)
T 3s55_A 83 RAALESFVAEAEDTLGGIDIAITNAGI 109 (281)
T ss_dssp HHHHHHHHHHHHHHHTCCCEEEECCCC
T ss_pred HHHHHHHHHHHHHhcCCCCEEEECCCC
Confidence 3211 1 1011112478999987644
No 405
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=70.97 E-value=36 Score=28.78 Aligned_cols=82 Identities=16% Similarity=0.203 Sum_probs=50.3
Q ss_pred CCCCEEEEECCccchHHHHH----HHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHH--HH-hhhc
Q 022298 154 LRPGRWLDLYSGTGSVGIEA----ISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLE--RA-EQFV 226 (299)
Q Consensus 154 ~~~~~VLDLfaGSGalgIEA----lSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~--~~-~~~~ 226 (299)
+.+.++|=.| |+|.+|.+. +.+|+ +|++++.++... +.+.+.++..+ .++.++.+|+.+... .. ....
T Consensus 11 l~~k~vlItG-asggiG~~la~~l~~~G~-~V~~~~r~~~~~-~~~~~~l~~~~--~~~~~~~~D~~~~~~~~~~~~~~~ 85 (260)
T 3awd_A 11 LDNRVAIVTG-GAQNIGLACVTALAEAGA-RVIIADLDEAMA-TKAVEDLRMEG--HDVSSVVMDVTNTESVQNAVRSVH 85 (260)
T ss_dssp CTTCEEEEET-TTSHHHHHHHHHHHHTTC-EEEEEESCHHHH-HHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEeC-CCchHHHHHHHHHHHCCC-EEEEEeCCHHHH-HHHHHHHHhcC--CceEEEEecCCCHHHHHHHHHHHH
Confidence 4567777554 567777654 35687 699999998776 55556665544 347888888765321 11 0000
Q ss_pred CCCCCeeEEEEcCC
Q 022298 227 GKDGPFDYMSVTPP 240 (299)
Q Consensus 227 ~~~~~fDlI~iDPP 240 (299)
...+..|+||.+.-
T Consensus 86 ~~~~~id~vi~~Ag 99 (260)
T 3awd_A 86 EQEGRVDILVACAG 99 (260)
T ss_dssp HHHSCCCEEEECCC
T ss_pred HHcCCCCEEEECCC
Confidence 11146899997753
No 406
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=70.90 E-value=8.4 Score=35.65 Aligned_cols=75 Identities=15% Similarity=0.070 Sum_probs=44.4
Q ss_pred CCCEEEEECCccchHHHHHH----HcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcc---hhhHHHHHhhhcC
Q 022298 155 RPGRWLDLYSGTGSVGIEAI----SRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVR---VETFLERAEQFVG 227 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAl----SrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D---~~~~l~~~~~~~~ 227 (299)
.+.+||-.+ +|.+|+.++ .+|+.+|++++.+++.. +.++ .+|.. .++..+ -.++........
T Consensus 195 ~g~~VlV~G--aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~-~~~~----~lGa~---~vi~~~~~~~~~~~~~v~~~~- 263 (380)
T 1vj0_A 195 AGKTVVIQG--AGPLGLFGVVIARSLGAENVIVIAGSPNRL-KLAE----EIGAD---LTLNRRETSVEERRKAIMDIT- 263 (380)
T ss_dssp BTCEEEEEC--CSHHHHHHHHHHHHTTBSEEEEEESCHHHH-HHHH----HTTCS---EEEETTTSCHHHHHHHHHHHT-
T ss_pred CCCEEEEEC--cCHHHHHHHHHHHHcCCceEEEEcCCHHHH-HHHH----HcCCc---EEEeccccCcchHHHHHHHHh-
Confidence 578999988 456666544 36866899999999886 6665 36653 234332 223322221111
Q ss_pred CCCCeeEEEEcCC
Q 022298 228 KDGPFDYMSVTPP 240 (299)
Q Consensus 228 ~~~~fDlI~iDPP 240 (299)
.+..+|+||-.-.
T Consensus 264 ~g~g~Dvvid~~g 276 (380)
T 1vj0_A 264 HGRGADFILEATG 276 (380)
T ss_dssp TTSCEEEEEECSS
T ss_pred CCCCCcEEEECCC
Confidence 1236999885543
No 407
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=70.74 E-value=27 Score=30.02 Aligned_cols=80 Identities=15% Similarity=0.094 Sum_probs=48.1
Q ss_pred CCCCEEEEECCccchHHHH----HHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHH---Hhhhc
Q 022298 154 LRPGRWLDLYSGTGSVGIE----AISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLER---AEQFV 226 (299)
Q Consensus 154 ~~~~~VLDLfaGSGalgIE----AlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~---~~~~~ 226 (299)
+.++++|=-|+ +|.+|.+ ++.+|+ +|+.++.+...+ +.+.+. ++ .++.++.+|+.+...- .....
T Consensus 6 l~~k~vlVTGa-s~gIG~~ia~~l~~~G~-~V~~~~r~~~~~-~~~~~~---~~--~~~~~~~~D~~~~~~v~~~~~~~~ 77 (259)
T 4e6p_A 6 LEGKSALITGS-ARGIGRAFAEAYVREGA-TVAIADIDIERA-RQAAAE---IG--PAAYAVQMDVTRQDSIDAAIAATV 77 (259)
T ss_dssp TTTCEEEEETC-SSHHHHHHHHHHHHTTC-EEEEEESCHHHH-HHHHHH---HC--TTEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEECC-CcHHHHHHHHHHHHCCC-EEEEEeCCHHHH-HHHHHH---hC--CCceEEEeeCCCHHHHHHHHHHHH
Confidence 45677776664 4555654 346787 599999998775 444333 33 3467888887643211 11111
Q ss_pred CCCCCeeEEEEcCCC
Q 022298 227 GKDGPFDYMSVTPPY 241 (299)
Q Consensus 227 ~~~~~fDlI~iDPPY 241 (299)
...++.|+++.+.-.
T Consensus 78 ~~~g~id~lv~~Ag~ 92 (259)
T 4e6p_A 78 EHAGGLDILVNNAAL 92 (259)
T ss_dssp HHSSSCCEEEECCCC
T ss_pred HHcCCCCEEEECCCc
Confidence 123579999988654
No 408
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=70.56 E-value=13 Score=32.73 Aligned_cols=81 Identities=14% Similarity=0.051 Sum_probs=48.2
Q ss_pred CCCCEEEEECCccchHHHHH----HHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHH--H-Hhhhc
Q 022298 154 LRPGRWLDLYSGTGSVGIEA----ISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLE--R-AEQFV 226 (299)
Q Consensus 154 ~~~~~VLDLfaGSGalgIEA----lSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~--~-~~~~~ 226 (299)
+.++++|=-|+ +|.+|.+. +.+|+ +|+.++.++..+ +.+.+.++..+ ++.++.+|+.+... . .....
T Consensus 27 l~~k~vlVTGa-s~gIG~aia~~L~~~G~-~V~~~~r~~~~~-~~~~~~l~~~~---~~~~~~~Dv~d~~~v~~~~~~~~ 100 (276)
T 2b4q_A 27 LAGRIALVTGG-SRGIGQMIAQGLLEAGA-RVFICARDAEAC-ADTATRLSAYG---DCQAIPADLSSEAGARRLAQALG 100 (276)
T ss_dssp CTTCEEEEETT-TSHHHHHHHHHHHHTTC-EEEEECSCHHHH-HHHHHHHTTSS---CEEECCCCTTSHHHHHHHHHHHH
T ss_pred CCCCEEEEeCC-CChHHHHHHHHHHHCCC-EEEEEeCCHHHH-HHHHHHHHhcC---ceEEEEeeCCCHHHHHHHHHHHH
Confidence 35677776665 55666553 45787 699999998776 55544443322 46777788764321 1 11111
Q ss_pred CCCCCeeEEEEcCC
Q 022298 227 GKDGPFDYMSVTPP 240 (299)
Q Consensus 227 ~~~~~fDlI~iDPP 240 (299)
...+..|+++.+.-
T Consensus 101 ~~~g~iD~lvnnAg 114 (276)
T 2b4q_A 101 ELSARLDILVNNAG 114 (276)
T ss_dssp HHCSCCSEEEECCC
T ss_pred HhcCCCCEEEECCC
Confidence 11257899998764
No 409
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=70.22 E-value=20 Score=26.31 Aligned_cols=52 Identities=15% Similarity=0.113 Sum_probs=38.0
Q ss_pred CEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCeeEEEEcC
Q 022298 179 SEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDYMSVTP 239 (299)
Q Consensus 179 ~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fDlI~iDP 239 (299)
.+|..||-++... +.++..++..|+. + ....+..+.+.... ...+|+|++|-
T Consensus 3 ~~ilivdd~~~~~-~~l~~~L~~~g~~--v-~~~~~~~~al~~~~-----~~~~dlii~D~ 54 (120)
T 3f6p_A 3 KKILVVDDEKPIA-DILEFNLRKEGYE--V-HCAHDGNEAVEMVE-----ELQPDLILLDI 54 (120)
T ss_dssp CEEEEECSCHHHH-HHHHHHHHHTTCE--E-EEESSHHHHHHHHH-----TTCCSEEEEET
T ss_pred CeEEEEECCHHHH-HHHHHHHHhCCEE--E-EEeCCHHHHHHHHh-----hCCCCEEEEeC
Confidence 3689999999886 8888888877752 3 24566666665442 35799999996
No 410
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=69.95 E-value=22 Score=27.43 Aligned_cols=70 Identities=11% Similarity=0.033 Sum_probs=43.5
Q ss_pred CCEEEEECCccchHHHHHH----HcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCC
Q 022298 156 PGRWLDLYSGTGSVGIEAI----SRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGP 231 (299)
Q Consensus 156 ~~~VLDLfaGSGalgIEAl----SrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~ 231 (299)
..+++=+|+ |.+|...+ .+|. +|+.+|.|++.+ +.+++ .+ ..++.+|+.+..... .. .-..
T Consensus 6 ~~~v~I~G~--G~iG~~la~~L~~~g~-~V~~id~~~~~~-~~~~~----~~----~~~~~gd~~~~~~l~-~~--~~~~ 70 (141)
T 3llv_A 6 RYEYIVIGS--EAAGVGLVRELTAAGK-KVLAVDKSKEKI-ELLED----EG----FDAVIADPTDESFYR-SL--DLEG 70 (141)
T ss_dssp CCSEEEECC--SHHHHHHHHHHHHTTC-CEEEEESCHHHH-HHHHH----TT----CEEEECCTTCHHHHH-HS--CCTT
T ss_pred CCEEEEECC--CHHHHHHHHHHHHCCC-eEEEEECCHHHH-HHHHH----CC----CcEEECCCCCHHHHH-hC--Cccc
Confidence 346776766 55665533 3576 599999999886 55543 22 456788876532111 00 1246
Q ss_pred eeEEEEcCC
Q 022298 232 FDYMSVTPP 240 (299)
Q Consensus 232 fDlI~iDPP 240 (299)
+|+|++-.|
T Consensus 71 ~d~vi~~~~ 79 (141)
T 3llv_A 71 VSAVLITGS 79 (141)
T ss_dssp CSEEEECCS
T ss_pred CCEEEEecC
Confidence 899998777
No 411
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=69.29 E-value=8.1 Score=36.52 Aligned_cols=21 Identities=24% Similarity=0.248 Sum_probs=17.8
Q ss_pred CCEEEEECCccchHHHHHHHc
Q 022298 156 PGRWLDLYSGTGSVGIEAISR 176 (299)
Q Consensus 156 ~~~VLDLfaGSGalgIEAlSr 176 (299)
..+|+|+|||+|..++.+++.
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ 73 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDF 73 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHH
T ss_pred ceEEEecCCCCChhHHHHHHH
Confidence 578999999999999887653
No 412
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=69.25 E-value=20 Score=26.52 Aligned_cols=52 Identities=17% Similarity=0.150 Sum_probs=38.0
Q ss_pred CEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCeeEEEEcC
Q 022298 179 SEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDYMSVTP 239 (299)
Q Consensus 179 ~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fDlI~iDP 239 (299)
.+|..||-++... +.++..++..|+. + ....+..+.+.... ...+|+|++|-
T Consensus 3 ~~ILivdd~~~~~-~~l~~~l~~~g~~--v-~~~~~~~~al~~l~-----~~~~dlvllD~ 54 (122)
T 3gl9_A 3 KKVLLVDDSAVLR-KIVSFNLKKEGYE--V-IEAENGQIALEKLS-----EFTPDLIVLXI 54 (122)
T ss_dssp CEEEEECSCHHHH-HHHHHHHHHTTCE--E-EEESSHHHHHHHHT-----TBCCSEEEECS
T ss_pred ceEEEEeCCHHHH-HHHHHHHHHCCcE--E-EEeCCHHHHHHHHH-----hcCCCEEEEec
Confidence 3689999999886 8888888887752 3 34567776665542 35799999995
No 413
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=69.23 E-value=35 Score=28.80 Aligned_cols=80 Identities=13% Similarity=0.153 Sum_probs=49.9
Q ss_pred CCEEEEECCccchHHHHHH----H-cCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHH--HH-hhhcC
Q 022298 156 PGRWLDLYSGTGSVGIEAI----S-RGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLE--RA-EQFVG 227 (299)
Q Consensus 156 ~~~VLDLfaGSGalgIEAl----S-rGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~--~~-~~~~~ 227 (299)
+.++| +-.|+|.+|.+.+ . +|+ +|++++.+.... +.+.+.++..+ .++.++.+|+.+... .. ..+..
T Consensus 4 ~k~vl-ITGasggIG~~~a~~L~~~~g~-~V~~~~r~~~~~-~~~~~~l~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~ 78 (276)
T 1wma_A 4 IHVAL-VTGGNKGIGLAIVRDLCRLFSG-DVVLTARDVTRG-QAAVQQLQAEG--LSPRFHQLDIDDLQSIRALRDFLRK 78 (276)
T ss_dssp CCEEE-ESSCSSHHHHHHHHHHHHHSSS-EEEEEESSHHHH-HHHHHHHHHTT--CCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEE-EeCCCcHHHHHHHHHHHHhcCC-eEEEEeCChHHH-HHHHHHHHhcC--CeeEEEECCCCCHHHHHHHHHHHHH
Confidence 45666 5567788887643 4 677 699999998876 66666666554 346788888765321 11 00111
Q ss_pred CCCCeeEEEEcCC
Q 022298 228 KDGPFDYMSVTPP 240 (299)
Q Consensus 228 ~~~~fDlI~iDPP 240 (299)
..+.+|+||.+.-
T Consensus 79 ~~g~id~li~~Ag 91 (276)
T 1wma_A 79 EYGGLDVLVNNAG 91 (276)
T ss_dssp HHSSEEEEEECCC
T ss_pred hcCCCCEEEECCc
Confidence 1247999997753
No 414
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=69.15 E-value=21 Score=26.39 Aligned_cols=54 Identities=15% Similarity=-0.001 Sum_probs=39.3
Q ss_pred CCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCeeEEEEcCC
Q 022298 178 CSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPP 240 (299)
Q Consensus 178 a~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fDlI~iDPP 240 (299)
..+|..||-++... +.++.-++..|+. + ....+..+.+.... ...+|+|++|--
T Consensus 7 ~~~ilivdd~~~~~-~~l~~~L~~~g~~--v-~~~~~~~~a~~~l~-----~~~~dlvi~d~~ 60 (130)
T 3eod_A 7 GKQILIVEDEQVFR-SLLDSWFSSLGAT--T-VLAADGVDALELLG-----GFTPDLMICDIA 60 (130)
T ss_dssp TCEEEEECSCHHHH-HHHHHHHHHTTCE--E-EEESCHHHHHHHHT-----TCCCSEEEECCC
T ss_pred CCeEEEEeCCHHHH-HHHHHHHHhCCce--E-EEeCCHHHHHHHHh-----cCCCCEEEEecC
Confidence 34799999999886 8888888887752 3 34567666665542 457999999963
No 415
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=69.08 E-value=10 Score=34.34 Aligned_cols=44 Identities=16% Similarity=0.066 Sum_probs=31.1
Q ss_pred CCCEEEEECCccchHHHHHH----HcCCCEEEEEeCCHHHHHHHHHHHHHHhCCC
Q 022298 155 RPGRWLDLYSGTGSVGIEAI----SRGCSEVHFVEMDPWVVSNVLIPNLEWTGFL 205 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAl----SrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~ 205 (299)
.+.+||=.+| |.+|+.++ .+|+.+|+++|.+++.. +.++ .+|..
T Consensus 171 ~g~~vlv~Ga--G~vG~~a~qla~~~g~~~Vi~~~~~~~~~-~~~~----~lGa~ 218 (345)
T 3jv7_A 171 PGSTAVVIGV--GGLGHVGIQILRAVSAARVIAVDLDDDRL-ALAR----EVGAD 218 (345)
T ss_dssp TTCEEEEECC--SHHHHHHHHHHHHHCCCEEEEEESCHHHH-HHHH----HTTCS
T ss_pred CCCEEEEECC--CHHHHHHHHHHHHcCCCEEEEEcCCHHHH-HHHH----HcCCC
Confidence 5788988876 55665543 25667899999999886 6664 36653
No 416
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=69.08 E-value=8.2 Score=35.80 Aligned_cols=40 Identities=18% Similarity=0.133 Sum_probs=29.6
Q ss_pred CCCEEEEECCccchHHHHHH----HcCCCEEEEEeCCHHHHHHHHHH
Q 022298 155 RPGRWLDLYSGTGSVGIEAI----SRGCSEVHFVEMDPWVVSNVLIP 197 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAl----SrGa~~V~~VD~n~~Al~~~a~~ 197 (299)
.+.+||-.|| |.+|+.++ .+|+.+|+++|.+++.+ +.+++
T Consensus 185 ~g~~VlV~Ga--G~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~-~~a~~ 228 (398)
T 1kol_A 185 PGSTVYVAGA--GPVGLAAAASARLLGAAVVIVGDLNPARL-AHAKA 228 (398)
T ss_dssp TTCEEEEECC--SHHHHHHHHHHHHTTCSEEEEEESCHHHH-HHHHH
T ss_pred CCCEEEEECC--cHHHHHHHHHHHHCCCCeEEEEcCCHHHH-HHHHH
Confidence 5789998875 55665543 36888899999999886 77643
No 417
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=69.02 E-value=15 Score=33.53 Aligned_cols=74 Identities=18% Similarity=0.065 Sum_probs=43.0
Q ss_pred CCCEEEEECCccchHHHHHH----HcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCC
Q 022298 155 RPGRWLDLYSGTGSVGIEAI----SRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDG 230 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAl----SrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~ 230 (299)
.+.+||=.| +|.+|+.++ .+|+ +|+++|.+++.+ +.++ .+|... ++..+-.++......+. .+.
T Consensus 189 ~g~~VlV~G--~G~vG~~a~qla~~~Ga-~Vi~~~~~~~~~-~~~~----~lGa~~---vi~~~~~~~~~~v~~~~-~g~ 256 (363)
T 3uog_A 189 AGDRVVVQG--TGGVALFGLQIAKATGA-EVIVTSSSREKL-DRAF----ALGADH---GINRLEEDWVERVYALT-GDR 256 (363)
T ss_dssp TTCEEEEES--SBHHHHHHHHHHHHTTC-EEEEEESCHHHH-HHHH----HHTCSE---EEETTTSCHHHHHHHHH-TTC
T ss_pred CCCEEEEEC--CCHHHHHHHHHHHHcCC-EEEEEecCchhH-HHHH----HcCCCE---EEcCCcccHHHHHHHHh-CCC
Confidence 578898886 456666544 3688 799999998876 6654 367532 33322222222221111 234
Q ss_pred CeeEEEEcCC
Q 022298 231 PFDYMSVTPP 240 (299)
Q Consensus 231 ~fDlI~iDPP 240 (299)
.+|+||-.-.
T Consensus 257 g~D~vid~~g 266 (363)
T 3uog_A 257 GADHILEIAG 266 (363)
T ss_dssp CEEEEEEETT
T ss_pred CceEEEECCC
Confidence 7999885443
No 418
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=68.88 E-value=29 Score=29.19 Aligned_cols=82 Identities=13% Similarity=0.161 Sum_probs=50.8
Q ss_pred CCCCEEEEECCccchHHHHHH----HcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHH--HH-hhhc
Q 022298 154 LRPGRWLDLYSGTGSVGIEAI----SRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLE--RA-EQFV 226 (299)
Q Consensus 154 ~~~~~VLDLfaGSGalgIEAl----SrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~--~~-~~~~ 226 (299)
+.+.++| +-.|+|.+|.+.+ .+|+ +|++++.++... +.+.+.++..+ .++.++.+|+.+... .. ....
T Consensus 9 ~~~~~vl-VtGasggiG~~la~~l~~~G~-~V~~~~r~~~~~-~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~ 83 (255)
T 1fmc_A 9 LDGKCAI-ITGAGAGIGKEIAITFATAGA-SVVVSDINADAA-NHVVDEIQQLG--GQAFACRCDITSEQELSALADFAI 83 (255)
T ss_dssp CTTCEEE-ETTTTSHHHHHHHHHHHTTTC-EEEEEESCHHHH-HHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEE-EECCccHHHHHHHHHHHHCCC-EEEEEcCCHHHH-HHHHHHHHHhC--CceEEEEcCCCCHHHHHHHHHHHH
Confidence 4566666 4556777887643 4676 699999998876 66666666544 347788888764321 11 0000
Q ss_pred CCCCCeeEEEEcCC
Q 022298 227 GKDGPFDYMSVTPP 240 (299)
Q Consensus 227 ~~~~~fDlI~iDPP 240 (299)
...+.+|+|+.+.-
T Consensus 84 ~~~~~~d~vi~~Ag 97 (255)
T 1fmc_A 84 SKLGKVDILVNNAG 97 (255)
T ss_dssp HHHSSCCEEEECCC
T ss_pred HhcCCCCEEEECCC
Confidence 11147899997654
No 419
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=68.83 E-value=16 Score=31.81 Aligned_cols=84 Identities=10% Similarity=0.002 Sum_probs=49.8
Q ss_pred CCCCEEEEECCccchHHHHH----HHcCCCEEEEEeCCHHHHHHHHHHHHHHhCC-CCcEEEEEcchhhHHHH--H-hhh
Q 022298 154 LRPGRWLDLYSGTGSVGIEA----ISRGCSEVHFVEMDPWVVSNVLIPNLEWTGF-LDVSSIHTVRVETFLER--A-EQF 225 (299)
Q Consensus 154 ~~~~~VLDLfaGSGalgIEA----lSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~-~~~~~vi~~D~~~~l~~--~-~~~ 225 (299)
+.++++|=-| |+|.+|.+. +.+|+ +|+.++.++..+ +.+.+.++..+. ..++.++.+|+.+...- . ...
T Consensus 4 l~~k~vlVTG-as~gIG~~ia~~l~~~G~-~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 80 (280)
T 1xkq_A 4 FSNKTVIITG-SSNGIGRTTAILFAQEGA-NVTITGRSSERL-EETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINST 80 (280)
T ss_dssp TTTCEEEETT-CSSHHHHHHHHHHHHTTC-EEEEEESCHHHH-HHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCCEEEEEC-CCChHHHHHHHHHHHCCC-EEEEEeCCHHHH-HHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHH
Confidence 3456666555 556666553 45787 699999998876 666565554332 11577888887653211 0 000
Q ss_pred cCCCCCeeEEEEcCC
Q 022298 226 VGKDGPFDYMSVTPP 240 (299)
Q Consensus 226 ~~~~~~fDlI~iDPP 240 (299)
....+..|+++.+.-
T Consensus 81 ~~~~g~iD~lv~nAg 95 (280)
T 1xkq_A 81 LKQFGKIDVLVNNAG 95 (280)
T ss_dssp HHHHSCCCEEEECCC
T ss_pred HHhcCCCCEEEECCC
Confidence 111247899998763
No 420
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=68.49 E-value=33 Score=29.29 Aligned_cols=79 Identities=16% Similarity=0.123 Sum_probs=47.8
Q ss_pred CEEEEECCccchHHHHH----HHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHH--HH-hhhcCCC
Q 022298 157 GRWLDLYSGTGSVGIEA----ISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLE--RA-EQFVGKD 229 (299)
Q Consensus 157 ~~VLDLfaGSGalgIEA----lSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~--~~-~~~~~~~ 229 (299)
+++|=-| |+|.+|.+. +.+|+ +|+.++.++..+ +.+.+.++..+ .++.++.+|+.+... .. .......
T Consensus 3 k~vlVTG-as~gIG~~ia~~l~~~G~-~V~~~~r~~~~~-~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~~~~~ 77 (256)
T 1geg_A 3 KVALVTG-AGQGIGKAIALRLVKDGF-AVAIADYNDATA-KAVASEINQAG--GHAVAVKVDVSDRDQVFAAVEQARKTL 77 (256)
T ss_dssp CEEEEET-TTSHHHHHHHHHHHHTTC-EEEEEESCHHHH-HHHHHHHHHTT--CCEEEEECCTTSHHHHHHHHHHHHHHT
T ss_pred CEEEEEC-CCChHHHHHHHHHHHCCC-EEEEEeCCHHHH-HHHHHHHHhcC--CcEEEEEecCCCHHHHHHHHHHHHHHh
Confidence 3455444 456666654 45787 699999998876 66656665544 347788888765321 11 1111112
Q ss_pred CCeeEEEEcCC
Q 022298 230 GPFDYMSVTPP 240 (299)
Q Consensus 230 ~~fDlI~iDPP 240 (299)
+..|+++.+.-
T Consensus 78 g~id~lv~nAg 88 (256)
T 1geg_A 78 GGFDVIVNNAG 88 (256)
T ss_dssp TCCCEEEECCC
T ss_pred CCCCEEEECCC
Confidence 47899998763
No 421
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=68.44 E-value=34 Score=29.78 Aligned_cols=82 Identities=10% Similarity=0.012 Sum_probs=50.2
Q ss_pred CCCCEEEEECCccchHHHHH----HHcCCCEEEEEeCCHHHHHHHHHHHHHHh-CCCCcEEEEEcchhhHHH--HH-hhh
Q 022298 154 LRPGRWLDLYSGTGSVGIEA----ISRGCSEVHFVEMDPWVVSNVLIPNLEWT-GFLDVSSIHTVRVETFLE--RA-EQF 225 (299)
Q Consensus 154 ~~~~~VLDLfaGSGalgIEA----lSrGa~~V~~VD~n~~Al~~~a~~N~~~~-g~~~~~~vi~~D~~~~l~--~~-~~~ 225 (299)
..+.++|=.| |+|.+|.+. +.+|+ +|++++.++..+ +.+.+.++.. + .++.++.+|+.+... .. ...
T Consensus 24 l~~k~vlITG-asggiG~~la~~L~~~G~-~V~~~~r~~~~~-~~~~~~l~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~ 98 (302)
T 1w6u_A 24 FQGKVAFITG-GGTGLGKGMTTLLSSLGA-QCVIASRKMDVL-KATAEQISSQTG--NKVHAIQCDVRDPDMVQNTVSEL 98 (302)
T ss_dssp TTTCEEEEET-TTSHHHHHHHHHHHHTTC-EEEEEESCHHHH-HHHHHHHHHHHS--SCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCEEEEEC-CCchHHHHHHHHHHHCCC-EEEEEeCCHHHH-HHHHHHHHHhcC--CceEEEEeCCCCHHHHHHHHHHH
Confidence 4566777555 556667654 45687 699999998876 5555555443 3 347888888764321 11 111
Q ss_pred cCCCCCeeEEEEcCC
Q 022298 226 VGKDGPFDYMSVTPP 240 (299)
Q Consensus 226 ~~~~~~fDlI~iDPP 240 (299)
....+++|+|+.+.-
T Consensus 99 ~~~~g~id~li~~Ag 113 (302)
T 1w6u_A 99 IKVAGHPNIVINNAA 113 (302)
T ss_dssp HHHTCSCSEEEECCC
T ss_pred HHHcCCCCEEEECCC
Confidence 111357899998764
No 422
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=68.34 E-value=15 Score=31.52 Aligned_cols=80 Identities=10% Similarity=0.055 Sum_probs=47.6
Q ss_pred CCCCEEEEECCccchHHHH----HHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHH--H-hhhc
Q 022298 154 LRPGRWLDLYSGTGSVGIE----AISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLER--A-EQFV 226 (299)
Q Consensus 154 ~~~~~VLDLfaGSGalgIE----AlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~--~-~~~~ 226 (299)
+.++++|=-|++ |.+|.+ ++.+|+ +|+.++.+.+.+ +.+.+. ++ .++.++.+|+.+...- . ....
T Consensus 4 l~gk~vlVTGas-~gIG~a~a~~l~~~G~-~V~~~~r~~~~~-~~~~~~---~~--~~~~~~~~Dv~~~~~v~~~~~~~~ 75 (247)
T 3rwb_A 4 LAGKTALVTGAA-QGIGKAIAARLAADGA-TVIVSDINAEGA-KAAAAS---IG--KKARAIAADISDPGSVKALFAEIQ 75 (247)
T ss_dssp TTTCEEEEETTT-SHHHHHHHHHHHHTTC-EEEEECSCHHHH-HHHHHH---HC--TTEEECCCCTTCHHHHHHHHHHHH
T ss_pred cCCCEEEEECCC-CHHHHHHHHHHHHCCC-EEEEEeCCHHHH-HHHHHH---hC--CceEEEEcCCCCHHHHHHHHHHHH
Confidence 467788877655 445544 446787 599999998776 444333 33 3477788887543211 1 1011
Q ss_pred CCCCCeeEEEEcCCC
Q 022298 227 GKDGPFDYMSVTPPY 241 (299)
Q Consensus 227 ~~~~~fDlI~iDPPY 241 (299)
...++.|+++.+.-+
T Consensus 76 ~~~g~id~lv~nAg~ 90 (247)
T 3rwb_A 76 ALTGGIDILVNNASI 90 (247)
T ss_dssp HHHSCCSEEEECCCC
T ss_pred HHCCCCCEEEECCCC
Confidence 112478999987654
No 423
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=68.33 E-value=17 Score=31.97 Aligned_cols=80 Identities=16% Similarity=0.191 Sum_probs=47.3
Q ss_pred CCCCEEEEECCccchHHHH----HHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHH---Hhhhc
Q 022298 154 LRPGRWLDLYSGTGSVGIE----AISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLER---AEQFV 226 (299)
Q Consensus 154 ~~~~~VLDLfaGSGalgIE----AlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~---~~~~~ 226 (299)
+.++++|=-|++ |.+|.+ ++.+|+ +|+.++.+.+.+ +.+.+.+ + .++.++.+|+.+...- .....
T Consensus 27 l~gk~vlVTGas-~gIG~aia~~la~~G~-~V~~~~r~~~~~-~~~~~~~---~--~~~~~~~~Dv~d~~~v~~~~~~~~ 98 (277)
T 3gvc_A 27 LAGKVAIVTGAG-AGIGLAVARRLADEGC-HVLCADIDGDAA-DAAATKI---G--CGAAACRVDVSDEQQIIAMVDACV 98 (277)
T ss_dssp CTTCEEEETTTT-STHHHHHHHHHHHTTC-EEEEEESSHHHH-HHHHHHH---C--SSCEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEECCC-cHHHHHHHHHHHHCCC-EEEEEeCCHHHH-HHHHHHc---C--CcceEEEecCCCHHHHHHHHHHHH
Confidence 456777766654 445544 446787 699999998876 4444333 3 3467788887654211 00011
Q ss_pred CCCCCeeEEEEcCCC
Q 022298 227 GKDGPFDYMSVTPPY 241 (299)
Q Consensus 227 ~~~~~fDlI~iDPPY 241 (299)
...++.|+++.+.-.
T Consensus 99 ~~~g~iD~lvnnAg~ 113 (277)
T 3gvc_A 99 AAFGGVDKLVANAGV 113 (277)
T ss_dssp HHHSSCCEEEECCCC
T ss_pred HHcCCCCEEEECCCC
Confidence 112478999987644
No 424
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=68.15 E-value=25 Score=30.79 Aligned_cols=84 Identities=10% Similarity=0.043 Sum_probs=49.6
Q ss_pred CCCCEEEEECCccchHHHH----HHHcCCCEEEEEeC-CHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHH---Hhhh
Q 022298 154 LRPGRWLDLYSGTGSVGIE----AISRGCSEVHFVEM-DPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLER---AEQF 225 (299)
Q Consensus 154 ~~~~~VLDLfaGSGalgIE----AlSrGa~~V~~VD~-n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~---~~~~ 225 (299)
+.++++|=-|+++ .+|.+ ++.+|+ +|+.++. +.+.+ +.+.+.++... ..++.++.+|+.+...- ....
T Consensus 23 l~~k~~lVTGas~-GIG~~ia~~la~~G~-~V~~~~r~~~~~~-~~~~~~~~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~ 98 (281)
T 3v2h_A 23 MMTKTAVITGSTS-GIGLAIARTLAKAGA-NIVLNGFGAPDEI-RTVTDEVAGLS-SGTVLHHPADMTKPSEIADMMAMV 98 (281)
T ss_dssp CTTCEEEEETCSS-HHHHHHHHHHHHTTC-EEEEECCCCHHHH-HHHHHHHHTTC-SSCEEEECCCTTCHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCc-HHHHHHHHHHHHCCC-EEEEEeCCChHHH-HHHHHHHhhcc-CCcEEEEeCCCCCHHHHHHHHHHH
Confidence 4577788777554 45544 446787 6999998 66655 55555554432 23577888887643211 1111
Q ss_pred cCCCCCeeEEEEcCCC
Q 022298 226 VGKDGPFDYMSVTPPY 241 (299)
Q Consensus 226 ~~~~~~fDlI~iDPPY 241 (299)
....+..|+++.+.-.
T Consensus 99 ~~~~g~iD~lv~nAg~ 114 (281)
T 3v2h_A 99 ADRFGGADILVNNAGV 114 (281)
T ss_dssp HHHTSSCSEEEECCCC
T ss_pred HHHCCCCCEEEECCCC
Confidence 1123578999987654
No 425
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=68.11 E-value=23 Score=30.62 Aligned_cols=84 Identities=18% Similarity=0.160 Sum_probs=50.5
Q ss_pred CCCCEEEEECCccchHHHHH----HHcCCCEEEEEeC-CHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHH---Hhhh
Q 022298 154 LRPGRWLDLYSGTGSVGIEA----ISRGCSEVHFVEM-DPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLER---AEQF 225 (299)
Q Consensus 154 ~~~~~VLDLfaGSGalgIEA----lSrGa~~V~~VD~-n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~---~~~~ 225 (299)
+.++++|=-|+ +|.+|.+. +.+|+ +|+.++. +.... +.+.+.++..+ .++.++.+|+.+...- ....
T Consensus 27 l~~k~vlITGa-s~gIG~~la~~l~~~G~-~V~~~~r~~~~~~-~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~ 101 (271)
T 4iin_A 27 FTGKNVLITGA-SKGIGAEIAKTLASMGL-KVWINYRSNAEVA-DALKNELEEKG--YKAAVIKFDAASESDFIEAIQTI 101 (271)
T ss_dssp CSCCEEEETTC-SSHHHHHHHHHHHHTTC-EEEEEESSCHHHH-HHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHH
T ss_pred cCCCEEEEECC-CcHHHHHHHHHHHHCCC-EEEEEeCCCHHHH-HHHHHHHHhcC--CceEEEECCCCCHHHHHHHHHHH
Confidence 45777775554 55566553 45787 5899988 56554 66666666555 3478888887643211 1111
Q ss_pred cCCCCCeeEEEEcCCCC
Q 022298 226 VGKDGPFDYMSVTPPYT 242 (299)
Q Consensus 226 ~~~~~~fDlI~iDPPY~ 242 (299)
....++.|+++.+.-+.
T Consensus 102 ~~~~g~id~li~nAg~~ 118 (271)
T 4iin_A 102 VQSDGGLSYLVNNAGVV 118 (271)
T ss_dssp HHHHSSCCEEEECCCCC
T ss_pred HHhcCCCCEEEECCCcC
Confidence 11125789999886543
No 426
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=67.93 E-value=24 Score=30.69 Aligned_cols=83 Identities=12% Similarity=0.060 Sum_probs=49.6
Q ss_pred CCCCEEEEECCccchHHHH----HHHcCCCEEEEEeC-CHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHH--H-hhh
Q 022298 154 LRPGRWLDLYSGTGSVGIE----AISRGCSEVHFVEM-DPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLER--A-EQF 225 (299)
Q Consensus 154 ~~~~~VLDLfaGSGalgIE----AlSrGa~~V~~VD~-n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~--~-~~~ 225 (299)
+.++++|=-|+ +|.+|.+ ++.+|+ +|+.++. +.... +.+.+.++..+ .++.++.+|+.+...- . ...
T Consensus 26 l~~k~vlVTGa-s~gIG~aia~~la~~G~-~V~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~D~~d~~~v~~~~~~~ 100 (269)
T 4dmm_A 26 LTDRIALVTGA-SRGIGRAIALELAAAGA-KVAVNYASSAGAA-DEVVAAIAAAG--GEAFAVKADVSQESEVEALFAAV 100 (269)
T ss_dssp TTTCEEEETTC-SSHHHHHHHHHHHHTTC-EEEEEESSCHHHH-HHHHHHHHHTT--CCEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCCEEEEECC-CCHHHHHHHHHHHHCCC-EEEEEeCCChHHH-HHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHH
Confidence 45677775554 5556655 345787 5888888 66665 66666666554 3477888887653211 0 101
Q ss_pred cCCCCCeeEEEEcCCC
Q 022298 226 VGKDGPFDYMSVTPPY 241 (299)
Q Consensus 226 ~~~~~~fDlI~iDPPY 241 (299)
....++.|+++.+.-.
T Consensus 101 ~~~~g~id~lv~nAg~ 116 (269)
T 4dmm_A 101 IERWGRLDVLVNNAGI 116 (269)
T ss_dssp HHHHSCCCEEEECCCC
T ss_pred HHHcCCCCEEEECCCC
Confidence 1112478999988644
No 427
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=67.84 E-value=30 Score=29.96 Aligned_cols=83 Identities=19% Similarity=0.158 Sum_probs=49.6
Q ss_pred CCCCEEEEECCccchHHHHH----HHcCCCEEEEEeCCHHHHHHHHHHHH-HHhCCCCcEEEEEcchhhHHH--HH-hhh
Q 022298 154 LRPGRWLDLYSGTGSVGIEA----ISRGCSEVHFVEMDPWVVSNVLIPNL-EWTGFLDVSSIHTVRVETFLE--RA-EQF 225 (299)
Q Consensus 154 ~~~~~VLDLfaGSGalgIEA----lSrGa~~V~~VD~n~~Al~~~a~~N~-~~~g~~~~~~vi~~D~~~~l~--~~-~~~ 225 (299)
+.++++|=.|+ +|.+|.+. +.+|+ +|++++.++..+ +.+.+.+ +..+. ++.++.+|+.+... .. ...
T Consensus 19 l~~k~~lVTGa-s~gIG~~ia~~l~~~G~-~V~~~~r~~~~~-~~~~~~l~~~~~~--~~~~~~~Dl~~~~~v~~~~~~~ 93 (267)
T 1vl8_A 19 LRGRVALVTGG-SRGLGFGIAQGLAEAGC-SVVVASRNLEEA-SEAAQKLTEKYGV--ETMAFRCDVSNYEEVKKLLEAV 93 (267)
T ss_dssp CTTCEEEEETT-TSHHHHHHHHHHHHTTC-EEEEEESCHHHH-HHHHHHHHHHHCC--CEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCEEEEECC-CCHHHHHHHHHHHHCCC-EEEEEeCCHHHH-HHHHHHHHHhcCC--eEEEEEcCCCCHHHHHHHHHHH
Confidence 45677776654 56666553 45687 699999998876 5555555 33442 46778888764321 11 000
Q ss_pred cCCCCCeeEEEEcCCC
Q 022298 226 VGKDGPFDYMSVTPPY 241 (299)
Q Consensus 226 ~~~~~~fDlI~iDPPY 241 (299)
....+..|+++.+--+
T Consensus 94 ~~~~g~iD~lvnnAg~ 109 (267)
T 1vl8_A 94 KEKFGKLDTVVNAAGI 109 (267)
T ss_dssp HHHHSCCCEEEECCCC
T ss_pred HHHcCCCCEEEECCCc
Confidence 1112478999987644
No 428
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=67.80 E-value=48 Score=28.30 Aligned_cols=83 Identities=14% Similarity=0.014 Sum_probs=49.7
Q ss_pred CCCCEEEEECCccchHHHHH----HHcCCCEEEEEeCCHHHHHHHHHHHHHHh-CCCCcEEEEEcchhhHHHH--H-hhh
Q 022298 154 LRPGRWLDLYSGTGSVGIEA----ISRGCSEVHFVEMDPWVVSNVLIPNLEWT-GFLDVSSIHTVRVETFLER--A-EQF 225 (299)
Q Consensus 154 ~~~~~VLDLfaGSGalgIEA----lSrGa~~V~~VD~n~~Al~~~a~~N~~~~-g~~~~~~vi~~D~~~~l~~--~-~~~ 225 (299)
+.++++|=-|+ +|.+|.+. +.+|+ +|+.++.++..+ +.+.+.++.. + .++.++.+|+.+...- . ...
T Consensus 5 l~~k~vlVTGa-s~gIG~~ia~~l~~~G~-~V~~~~r~~~~~-~~~~~~l~~~~~--~~~~~~~~D~~~~~~~~~~~~~~ 79 (263)
T 3ai3_A 5 ISGKVAVITGS-SSGIGLAIAEGFAKEGA-HIVLVARQVDRL-HEAARSLKEKFG--VRVLEVAVDVATPEGVDAVVESV 79 (263)
T ss_dssp CTTCEEEEESC-SSHHHHHHHHHHHHTTC-EEEEEESCHHHH-HHHHHHHHHHHC--CCEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCCEEEEECC-CchHHHHHHHHHHHCCC-EEEEEcCCHHHH-HHHHHHHHHhcC--CceEEEEcCCCCHHHHHHHHHHH
Confidence 45677775554 55666553 45787 699999998876 5555555433 4 2477888887643211 1 000
Q ss_pred cCCCCCeeEEEEcCCC
Q 022298 226 VGKDGPFDYMSVTPPY 241 (299)
Q Consensus 226 ~~~~~~fDlI~iDPPY 241 (299)
....+..|+++.+.-+
T Consensus 80 ~~~~g~id~lv~~Ag~ 95 (263)
T 3ai3_A 80 RSSFGGADILVNNAGT 95 (263)
T ss_dssp HHHHSSCSEEEECCCC
T ss_pred HHHcCCCCEEEECCCC
Confidence 0112478999987643
No 429
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=67.58 E-value=28 Score=31.12 Aligned_cols=83 Identities=11% Similarity=0.077 Sum_probs=48.2
Q ss_pred CCCCEEEEECCccchHHHH----HHHcCCCEEEEEeCC------------HHHHHHHHHHHHHHhCCCCcEEEEEcchhh
Q 022298 154 LRPGRWLDLYSGTGSVGIE----AISRGCSEVHFVEMD------------PWVVSNVLIPNLEWTGFLDVSSIHTVRVET 217 (299)
Q Consensus 154 ~~~~~VLDLfaGSGalgIE----AlSrGa~~V~~VD~n------------~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~ 217 (299)
+.++++|=-|+ +|.+|.+ ++.+|+ +|+.+|.+ .+.+ +.+.+.++..+ .++.++.+|+.+
T Consensus 44 l~gk~~lVTGa-s~GIG~aia~~la~~G~-~Vv~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~Dv~d 118 (317)
T 3oec_A 44 LQGKVAFITGA-ARGQGRTHAVRLAQDGA-DIVAIDLCRQQPNLDYAQGSPEEL-KETVRLVEEQG--RRIIARQADVRD 118 (317)
T ss_dssp TTTCEEEESSC-SSHHHHHHHHHHHHTTC-EEEEEECCCCCTTCCSCCCCHHHH-HHHHHHHHHTT--CCEEEEECCTTC
T ss_pred cCCCEEEEeCC-CcHHHHHHHHHHHHCCC-eEEEEecccccccccccccCHHHH-HHHHHHHHhcC--CeEEEEECCCCC
Confidence 45667775555 4555654 345787 59999886 5555 44445555544 347788888754
Q ss_pred HHHH---HhhhcCCCCCeeEEEEcCCC
Q 022298 218 FLER---AEQFVGKDGPFDYMSVTPPY 241 (299)
Q Consensus 218 ~l~~---~~~~~~~~~~fDlI~iDPPY 241 (299)
...- ........++.|+++.+.=+
T Consensus 119 ~~~v~~~~~~~~~~~g~iD~lVnnAg~ 145 (317)
T 3oec_A 119 LASLQAVVDEALAEFGHIDILVSNVGI 145 (317)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCC
Confidence 3211 00011112578999987643
No 430
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=66.84 E-value=10 Score=30.19 Aligned_cols=52 Identities=17% Similarity=0.134 Sum_probs=38.8
Q ss_pred EEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCeeEEEEcC
Q 022298 180 EVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDYMSVTP 239 (299)
Q Consensus 180 ~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fDlI~iDP 239 (299)
+|..||=|+... +.++.-++..|+.. + ....|..+.+.... ...||+|++|=
T Consensus 14 rILiVDD~~~~r-~~l~~~L~~~G~~~-v-~~a~~g~~al~~~~-----~~~~DlillD~ 65 (134)
T 3to5_A 14 KILIVDDFSTMR-RIVKNLLRDLGFNN-T-QEADDGLTALPMLK-----KGDFDFVVTDW 65 (134)
T ss_dssp CEEEECSCHHHH-HHHHHHHHHTTCCC-E-EEESSHHHHHHHHH-----HHCCSEEEEES
T ss_pred EEEEEeCCHHHH-HHHHHHHHHcCCcE-E-EEECCHHHHHHHHH-----hCCCCEEEEcC
Confidence 599999999886 89999999988753 2 23466666665442 35799999984
No 431
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=66.23 E-value=19 Score=26.96 Aligned_cols=53 Identities=26% Similarity=0.266 Sum_probs=38.7
Q ss_pred CEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCeeEEEEcCC
Q 022298 179 SEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPP 240 (299)
Q Consensus 179 ~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fDlI~iDPP 240 (299)
.+|..||-|+... +.++.-++..|+. + ....+..+.+.... ...+|+|++|--
T Consensus 7 ~~iLivdd~~~~~-~~l~~~l~~~g~~--v-~~~~~~~~a~~~l~-----~~~~dlvi~d~~ 59 (140)
T 3grc_A 7 PRILICEDDPDIA-RLLNLMLEKGGFD--S-DMVHSAAQALEQVA-----RRPYAAMTVDLN 59 (140)
T ss_dssp SEEEEECSCHHHH-HHHHHHHHHTTCE--E-EEECSHHHHHHHHH-----HSCCSEEEECSC
T ss_pred CCEEEEcCCHHHH-HHHHHHHHHCCCe--E-EEECCHHHHHHHHH-----hCCCCEEEEeCC
Confidence 4799999999986 8888888887753 3 34456666665442 357999999964
No 432
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=66.13 E-value=21 Score=30.66 Aligned_cols=86 Identities=9% Similarity=-0.016 Sum_probs=51.0
Q ss_pred CCCCEEEEECCc--cc---hHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHH--H-Hhhh
Q 022298 154 LRPGRWLDLYSG--TG---SVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLE--R-AEQF 225 (299)
Q Consensus 154 ~~~~~VLDLfaG--SG---algIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~--~-~~~~ 225 (299)
+.++++|=.|++ +| .++..++.+|+ +|+.++.+.... +.+.+-.+..+- .++.++.+|+.+... . ....
T Consensus 5 l~~k~vlVTGasg~~GIG~~ia~~l~~~G~-~V~~~~r~~~~~-~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~ 81 (266)
T 3oig_A 5 LEGRNIVVMGVANKRSIAWGIARSLHEAGA-RLIFTYAGERLE-KSVHELAGTLDR-NDSIILPCDVTNDAEIETCFASI 81 (266)
T ss_dssp CTTCEEEEECCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGH-HHHHHHHHTSSS-CCCEEEECCCSSSHHHHHHHHHH
T ss_pred cCCCEEEEEcCCCCCcHHHHHHHHHHHCCC-EEEEecCchHHH-HHHHHHHHhcCC-CCceEEeCCCCCHHHHHHHHHHH
Confidence 567788888765 22 23334456788 599999987665 555555554443 247788888754321 1 1111
Q ss_pred cCCCCCeeEEEEcCCCC
Q 022298 226 VGKDGPFDYMSVTPPYT 242 (299)
Q Consensus 226 ~~~~~~fDlI~iDPPY~ 242 (299)
....++.|+++.+.-+.
T Consensus 82 ~~~~g~id~li~~Ag~~ 98 (266)
T 3oig_A 82 KEQVGVIHGIAHCIAFA 98 (266)
T ss_dssp HHHHSCCCEEEECCCCC
T ss_pred HHHhCCeeEEEEccccc
Confidence 11124789999887543
No 433
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=66.07 E-value=23 Score=26.71 Aligned_cols=55 Identities=13% Similarity=0.073 Sum_probs=39.4
Q ss_pred CEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCeeEEEEcCC
Q 022298 179 SEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPP 240 (299)
Q Consensus 179 ~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fDlI~iDPP 240 (299)
.+|..||-++... +.++.-++..|... ......+..+.+.... ...+|+|++|.-
T Consensus 6 ~~ILivdd~~~~~-~~l~~~L~~~~~~~-~v~~~~~~~~a~~~l~-----~~~~dlii~D~~ 60 (144)
T 3kht_A 6 KRVLVVEDNPDDI-ALIRRVLDRKDIHC-QLEFVDNGAKALYQVQ-----QAKYDLIILDIG 60 (144)
T ss_dssp EEEEEECCCHHHH-HHHHHHHHHTTCCE-EEEEESSHHHHHHHHT-----TCCCSEEEECTT
T ss_pred CEEEEEeCCHHHH-HHHHHHHHhcCCCe-eEEEECCHHHHHHHhh-----cCCCCEEEEeCC
Confidence 3689999999886 88888888887642 1234456666665542 467999999964
No 434
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=65.79 E-value=63 Score=27.54 Aligned_cols=84 Identities=8% Similarity=-0.009 Sum_probs=49.3
Q ss_pred CCCCEEEEECCccchHHHHH----HHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHH--H-Hhhhc
Q 022298 154 LRPGRWLDLYSGTGSVGIEA----ISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLE--R-AEQFV 226 (299)
Q Consensus 154 ~~~~~VLDLfaGSGalgIEA----lSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~--~-~~~~~ 226 (299)
+.++++|=-|+ +|.+|.+. +.+|+ +|++++.++..+ +.+.+.++...-..++.++.+|+.+... . .....
T Consensus 5 l~~k~vlVTGa-s~gIG~~ia~~l~~~G~-~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~ 81 (260)
T 2z1n_A 5 IQGKLAVVTAG-SSGLGFASALELARNGA-RLLLFSRNREKL-EAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKAR 81 (260)
T ss_dssp CTTCEEEEETT-TSHHHHHHHHHHHHTTC-EEEEEESCHHHH-HHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEECC-CchHHHHHHHHHHHCCC-EEEEEeCCHHHH-HHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHH
Confidence 45667776665 55666553 45787 699999998876 5555555432101147788888754321 1 11111
Q ss_pred CCCCCeeEEEEcCCC
Q 022298 227 GKDGPFDYMSVTPPY 241 (299)
Q Consensus 227 ~~~~~fDlI~iDPPY 241 (299)
...+ .|+++.+.-+
T Consensus 82 ~~~g-id~lv~~Ag~ 95 (260)
T 2z1n_A 82 DLGG-ADILVYSTGG 95 (260)
T ss_dssp HTTC-CSEEEECCCC
T ss_pred HhcC-CCEEEECCCC
Confidence 1224 8999987654
No 435
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Probab=65.75 E-value=23 Score=31.17 Aligned_cols=58 Identities=12% Similarity=-0.004 Sum_probs=37.8
Q ss_pred CCCEEEEECCccchHHHHH----HHcCCCEEEEEe-CCHHHHHHHHHHHHH-HhCCCCcEEEEEcchhh
Q 022298 155 RPGRWLDLYSGTGSVGIEA----ISRGCSEVHFVE-MDPWVVSNVLIPNLE-WTGFLDVSSIHTVRVET 217 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEA----lSrGa~~V~~VD-~n~~Al~~~a~~N~~-~~g~~~~~~vi~~D~~~ 217 (299)
.++++|=-| |+|.+|.+. +.+|+ +|+.++ .++..+ +.+.+.++ ..+ .++.++.+|+.+
T Consensus 8 ~~k~~lVTG-as~GIG~aia~~la~~G~-~V~~~~~r~~~~~-~~~~~~l~~~~~--~~~~~~~~Dl~~ 71 (291)
T 1e7w_A 8 TVPVALVTG-AAKRLGRSIAEGLHAEGY-AVCLHYHRSAAEA-NALSATLNARRP--NSAITVQADLSN 71 (291)
T ss_dssp CCCEEEETT-CSSHHHHHHHHHHHHTTC-EEEEEESSCHHHH-HHHHHHHHHHST--TCEEEEECCCSS
T ss_pred CCCEEEEEC-CCchHHHHHHHHHHHCCC-eEEEEcCCCHHHH-HHHHHHHhhhcC--CeeEEEEeecCC
Confidence 456666554 556667653 35687 699999 998876 66655554 333 347778887654
No 436
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=65.69 E-value=14 Score=33.60 Aligned_cols=73 Identities=16% Similarity=0.126 Sum_probs=41.7
Q ss_pred CCCEEEEECCccchHHHHHH----HcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCC
Q 022298 155 RPGRWLDLYSGTGSVGIEAI----SRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDG 230 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAl----SrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~ 230 (299)
.+.+||=.|| +|.+|..++ .+|+ +|++++.+++.. +.+++ +|.. .++..+ .++........ .+.
T Consensus 159 ~g~~VlV~Ga-sg~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~-~~~~~----~ga~---~v~~~~-~~~~~~v~~~~-~~~ 226 (342)
T 4eye_A 159 AGETVLVLGA-AGGIGTAAIQIAKGMGA-KVIAVVNRTAAT-EFVKS----VGAD---IVLPLE-EGWAKAVREAT-GGA 226 (342)
T ss_dssp TTCEEEESST-TSHHHHHHHHHHHHTTC-EEEEEESSGGGH-HHHHH----HTCS---EEEESS-TTHHHHHHHHT-TTS
T ss_pred CCCEEEEECC-CCHHHHHHHHHHHHcCC-EEEEEeCCHHHH-HHHHh----cCCc---EEecCc-hhHHHHHHHHh-CCC
Confidence 5778886654 455555433 3688 799999998876 66654 5643 233333 33332221111 233
Q ss_pred CeeEEEEcC
Q 022298 231 PFDYMSVTP 239 (299)
Q Consensus 231 ~fDlI~iDP 239 (299)
.+|+||-.-
T Consensus 227 g~Dvvid~~ 235 (342)
T 4eye_A 227 GVDMVVDPI 235 (342)
T ss_dssp CEEEEEESC
T ss_pred CceEEEECC
Confidence 699988543
No 437
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=65.50 E-value=25 Score=30.69 Aligned_cols=82 Identities=17% Similarity=0.126 Sum_probs=49.0
Q ss_pred CCCCEEEEECCccchHHHHH----HHcCCCEEEEEeCCHHHHHHHHHHHHHH-hCCCCcEEEEEcchhhHHHH---Hhhh
Q 022298 154 LRPGRWLDLYSGTGSVGIEA----ISRGCSEVHFVEMDPWVVSNVLIPNLEW-TGFLDVSSIHTVRVETFLER---AEQF 225 (299)
Q Consensus 154 ~~~~~VLDLfaGSGalgIEA----lSrGa~~V~~VD~n~~Al~~~a~~N~~~-~g~~~~~~vi~~D~~~~l~~---~~~~ 225 (299)
+.++++|=-|++ |.+|.+. +.+|+ +|+.++.+...+ +.+.+.+.. .+ .++.++.+|+.+...- ....
T Consensus 25 l~~k~~lVTGas-~GIG~aia~~l~~~G~-~V~~~~r~~~~~-~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~ 99 (277)
T 4fc7_A 25 LRDKVAFITGGG-SGIGFRIAEIFMRHGC-HTVIASRSLPRV-LTAARKLAGATG--RRCLPLSMDVRAPPAVMAAVDQA 99 (277)
T ss_dssp TTTCEEEEETTT-SHHHHHHHHHHHTTTC-EEEEEESCHHHH-HHHHHHHHHHHS--SCEEEEECCTTCHHHHHHHHHHH
T ss_pred cCCCEEEEeCCC-chHHHHHHHHHHHCCC-EEEEEeCCHHHH-HHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHH
Confidence 457778866654 5556543 45687 699999998775 444444432 33 3477888887643211 0101
Q ss_pred cCCCCCeeEEEEcCC
Q 022298 226 VGKDGPFDYMSVTPP 240 (299)
Q Consensus 226 ~~~~~~fDlI~iDPP 240 (299)
....++.|+++.+.=
T Consensus 100 ~~~~g~id~lv~nAg 114 (277)
T 4fc7_A 100 LKEFGRIDILINCAA 114 (277)
T ss_dssp HHHHSCCCEEEECCC
T ss_pred HHHcCCCCEEEECCc
Confidence 111257899998764
No 438
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=65.22 E-value=33 Score=30.02 Aligned_cols=80 Identities=15% Similarity=0.119 Sum_probs=47.9
Q ss_pred CCCCEEEEECCccchHHHH----HHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHH---Hhhhc
Q 022298 154 LRPGRWLDLYSGTGSVGIE----AISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLER---AEQFV 226 (299)
Q Consensus 154 ~~~~~VLDLfaGSGalgIE----AlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~---~~~~~ 226 (299)
+.++++|=-|++ |.+|.+ ++.+|+ +|+.++.+...+ +.+.+. .+ .++.++.+|+.+...- .....
T Consensus 25 l~~k~vlVTGas-~GIG~aia~~l~~~G~-~V~~~~r~~~~~-~~~~~~---~~--~~~~~~~~Dv~d~~~v~~~~~~~~ 96 (277)
T 4dqx_A 25 LNQRVCIVTGGG-SGIGRATAELFAKNGA-YVVVADVNEDAA-VRVANE---IG--SKAFGVRVDVSSAKDAESMVEKTT 96 (277)
T ss_dssp TTTCEEEEETTT-SHHHHHHHHHHHHTTC-EEEEEESSHHHH-HHHHHH---HC--TTEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEECCC-cHHHHHHHHHHHHCCC-EEEEEeCCHHHH-HHHHHH---hC--CceEEEEecCCCHHHHHHHHHHHH
Confidence 457778877665 455554 446787 699999998775 433332 33 3477888887653211 00011
Q ss_pred CCCCCeeEEEEcCCC
Q 022298 227 GKDGPFDYMSVTPPY 241 (299)
Q Consensus 227 ~~~~~fDlI~iDPPY 241 (299)
...++.|+++.+.-+
T Consensus 97 ~~~g~iD~lv~nAg~ 111 (277)
T 4dqx_A 97 AKWGRVDVLVNNAGF 111 (277)
T ss_dssp HHHSCCCEEEECCCC
T ss_pred HHcCCCCEEEECCCc
Confidence 112478999987654
No 439
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=65.07 E-value=11 Score=34.55 Aligned_cols=74 Identities=15% Similarity=0.006 Sum_probs=40.5
Q ss_pred CCCEEEEECC--ccchHHHHHH-HcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCC
Q 022298 155 RPGRWLDLYS--GTGSVGIEAI-SRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGP 231 (299)
Q Consensus 155 ~~~~VLDLfa--GSGalgIEAl-SrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~ 231 (299)
.+.+||-.|+ |.|...+.++ .+|+ +|++++.+++.+ +.+++ +|.. .++..+-.++....... ....
T Consensus 163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga-~Vi~~~~~~~~~-~~~~~----~Ga~---~~~~~~~~~~~~~~~~~--~~~g 231 (362)
T 2c0c_A 163 EGKKVLVTAAAGGTGQFAMQLSKKAKC-HVIGTCSSDEKS-AFLKS----LGCD---RPINYKTEPVGTVLKQE--YPEG 231 (362)
T ss_dssp TTCEEEETTTTBTTHHHHHHHHHHTTC-EEEEEESSHHHH-HHHHH----TTCS---EEEETTTSCHHHHHHHH--CTTC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCC-EEEEEECCHHHH-HHHHH----cCCc---EEEecCChhHHHHHHHh--cCCC
Confidence 5778887763 3344444433 3688 799999998876 66653 5643 23332212222211111 1346
Q ss_pred eeEEEEcC
Q 022298 232 FDYMSVTP 239 (299)
Q Consensus 232 fDlI~iDP 239 (299)
+|+||-.-
T Consensus 232 ~D~vid~~ 239 (362)
T 2c0c_A 232 VDVVYESV 239 (362)
T ss_dssp EEEEEECS
T ss_pred CCEEEECC
Confidence 99988543
No 440
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=64.86 E-value=23 Score=30.51 Aligned_cols=81 Identities=12% Similarity=0.061 Sum_probs=48.1
Q ss_pred CCCCEEEEECCccchHHHH----HHHcCCCEEEEE-eCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHH--H-hhh
Q 022298 154 LRPGRWLDLYSGTGSVGIE----AISRGCSEVHFV-EMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLER--A-EQF 225 (299)
Q Consensus 154 ~~~~~VLDLfaGSGalgIE----AlSrGa~~V~~V-D~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~--~-~~~ 225 (299)
+.++++|=-|+++ .+|.+ ++.+|+ +|+.+ +.+.+.. +.+.+.++..+ .++.++.+|+.+...- . ...
T Consensus 6 l~~k~vlVTGas~-GIG~aia~~la~~G~-~V~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~ 80 (259)
T 3edm_A 6 FTNRTIVVAGAGR-DIGRACAIRFAQEGA-NVVLTYNGAAEGA-ATAVAEIEKLG--RSALAIKADLTNAAEVEAAISAA 80 (259)
T ss_dssp TTTCEEEEETTTS-HHHHHHHHHHHHTTC-EEEEEECSSCHHH-HHHHHHHHTTT--SCCEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCEEEEECCCc-hHHHHHHHHHHHCCC-EEEEEcCCCHHHH-HHHHHHHHhcC--CceEEEEcCCCCHHHHHHHHHHH
Confidence 4577888776655 45544 446788 47777 6676665 55666665554 3467888887643211 1 101
Q ss_pred cCCCCCeeEEEEcC
Q 022298 226 VGKDGPFDYMSVTP 239 (299)
Q Consensus 226 ~~~~~~fDlI~iDP 239 (299)
....++.|+++.+.
T Consensus 81 ~~~~g~id~lv~nA 94 (259)
T 3edm_A 81 ADKFGEIHGLVHVA 94 (259)
T ss_dssp HHHHCSEEEEEECC
T ss_pred HHHhCCCCEEEECC
Confidence 11125789999876
No 441
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=64.81 E-value=11 Score=33.27 Aligned_cols=82 Identities=13% Similarity=0.011 Sum_probs=49.1
Q ss_pred CCCCEEEEECCccchHHHH----HHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHH--HH-hhhc
Q 022298 154 LRPGRWLDLYSGTGSVGIE----AISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLE--RA-EQFV 226 (299)
Q Consensus 154 ~~~~~VLDLfaGSGalgIE----AlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~--~~-~~~~ 226 (299)
+.++++|=-|+ +|.+|.+ ++.+|+ +|+.++.+...+ +.+.+.++..+ .++.++.+|+.+... .. ....
T Consensus 6 l~gk~vlVTGa-s~GIG~aia~~la~~G~-~V~~~~r~~~~~-~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~ 80 (280)
T 3tox_A 6 LEGKIAIVTGA-SSGIGRAAALLFAREGA-KVVVTARNGNAL-AELTDEIAGGG--GEAAALAGDVGDEALHEALVELAV 80 (280)
T ss_dssp TTTCEEEESST-TSHHHHHHHHHHHHTTC-EEEECCSCHHHH-HHHHHHHTTTT--CCEEECCCCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEECC-CcHHHHHHHHHHHHCCC-EEEEEECCHHHH-HHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHH
Confidence 45667775555 4555654 345787 599999999876 65555554333 347778888764321 11 0011
Q ss_pred CCCCCeeEEEEcCC
Q 022298 227 GKDGPFDYMSVTPP 240 (299)
Q Consensus 227 ~~~~~fDlI~iDPP 240 (299)
...++.|+++.+.-
T Consensus 81 ~~~g~iD~lvnnAg 94 (280)
T 3tox_A 81 RRFGGLDTAFNNAG 94 (280)
T ss_dssp HHHSCCCEEEECCC
T ss_pred HHcCCCCEEEECCC
Confidence 11247899998764
No 442
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=64.77 E-value=7.7 Score=38.82 Aligned_cols=111 Identities=7% Similarity=-0.126 Sum_probs=60.0
Q ss_pred CCCCCHHHHHHHHHHHHHhcC---CCC-CCCCCCEEEEECCccchHHHHHHHc------------C-CCEEEEEeC---C
Q 022298 128 DVRPMMEVVKGAAFDILQSAG---GCP-ASLRPGRWLDLYSGTGSVGIEAISR------------G-CSEVHFVEM---D 187 (299)
Q Consensus 128 ~~RPttd~Vrealfn~L~~~~---~~~-~~~~~~~VLDLfaGSGalgIEAlSr------------G-a~~V~~VD~---n 187 (299)
.+....+-+.|+..--+.... .+. .....-+|+|+|-|||--.+.++.. + .-+.+.+|. +
T Consensus 35 ~y~s~~~~~~e~~~vf~~~~~l~~~~~~~~~~~~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~ 114 (676)
T 3ps9_A 35 VYFSNDNGLEETRYVFLGGNQLEVRFPEHPHPLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLT 114 (676)
T ss_dssp ESSCTTTHHHHHHHHTTGGGTHHHHGGGCSSSEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCC
T ss_pred cccCCcCHHHhhHhhhhccCChhHHHHhCCCCceEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCC
Confidence 355665556676543332210 000 0012358999999999877766542 1 125788999 5
Q ss_pred HHHHHHHHHH-----------HHHHh-----C-----CC---CcEEEEEcchhhHHHHHhhhcCCCCCeeEEEEcCCCC
Q 022298 188 PWVVSNVLIP-----------NLEWT-----G-----FL---DVSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYT 242 (299)
Q Consensus 188 ~~Al~~~a~~-----------N~~~~-----g-----~~---~~~~vi~~D~~~~l~~~~~~~~~~~~fDlI~iDPPY~ 242 (299)
++.+ ..+.. -++.. + +. -.+++..+|+.+.+.... ......||.||+|+ |.
T Consensus 115 ~~~l-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~l~~gd~~~~l~~~~--~~~~~~~d~~~~D~-f~ 189 (676)
T 3ps9_A 115 RADL-ALAHQHWPELAPWAEQLQAQWPMPLPGCHRLLLDAGRVTLDLWFGDINELTSQLD--DSLNQKVDAWFLDG-FA 189 (676)
T ss_dssp HHHH-HHHHTTCGGGHHHHHHHHHHCCCCCSEEEEEEEGGGTEEEEEEESCHHHHGGGBC--GGGTTCEEEEEECC-SC
T ss_pred HHHH-HHHHHhChhhHHHHHHHHHhCcccCCCceEEEecCCcEEEEEecCCHHHHHHhcc--cccCCcccEEEECC-CC
Confidence 5554 31111 11111 1 01 124577899988775431 01135799999998 43
No 443
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=64.66 E-value=46 Score=28.39 Aligned_cols=82 Identities=17% Similarity=0.135 Sum_probs=49.2
Q ss_pred CCCCEEEEECCccchHHHHH----HHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHH--H-Hhhhc
Q 022298 154 LRPGRWLDLYSGTGSVGIEA----ISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLE--R-AEQFV 226 (299)
Q Consensus 154 ~~~~~VLDLfaGSGalgIEA----lSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~--~-~~~~~ 226 (299)
+.++++|=. .|+|.+|.+. +.+|+ +|+.++.++..+ +.+.+.++..+ .++.++.+|+.+... . .....
T Consensus 12 l~~k~vlVT-Gas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~-~~~~~~l~~~~--~~~~~~~~D~~~~~~~~~~~~~~~ 86 (260)
T 2zat_A 12 LENKVALVT-ASTDGIGLAIARRLAQDGA-HVVVSSRKQENV-DRTVATLQGEG--LSVTGTVCHVGKAEDRERLVAMAV 86 (260)
T ss_dssp TTTCEEEES-SCSSHHHHHHHHHHHHTTC-EEEEEESCHHHH-HHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEE-CCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHH-HHHHHHHHhcC--CceEEEEccCCCHHHHHHHHHHHH
Confidence 346667654 4566677654 35687 699999998876 55556665544 246778888754321 1 00000
Q ss_pred CCCCCeeEEEEcCC
Q 022298 227 GKDGPFDYMSVTPP 240 (299)
Q Consensus 227 ~~~~~fDlI~iDPP 240 (299)
...+..|+++.+--
T Consensus 87 ~~~g~iD~lv~~Ag 100 (260)
T 2zat_A 87 NLHGGVDILVSNAA 100 (260)
T ss_dssp HHHSCCCEEEECCC
T ss_pred HHcCCCCEEEECCC
Confidence 11247899997753
No 444
>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*
Probab=64.65 E-value=18 Score=31.10 Aligned_cols=84 Identities=8% Similarity=-0.052 Sum_probs=48.7
Q ss_pred CCCCEEEEECCccchHHHHH----HH---cCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHH--H-Hh
Q 022298 154 LRPGRWLDLYSGTGSVGIEA----IS---RGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLE--R-AE 223 (299)
Q Consensus 154 ~~~~~VLDLfaGSGalgIEA----lS---rGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~--~-~~ 223 (299)
+.++++|=- .|+|.+|.+. ++ +|+ +|+.++.+++.+ +.+.+.++......++.++.+|+.+... . ..
T Consensus 4 l~~k~~lVT-Gas~gIG~~ia~~l~~~~~~G~-~V~~~~r~~~~~-~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~ 80 (259)
T 1oaa_A 4 LGCAVCVLT-GASRGFGRALAPQLARLLSPGS-VMLVSARSESML-RQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLS 80 (259)
T ss_dssp CBSEEEEES-SCSSHHHHHHHHHHHTTBCTTC-EEEEEESCHHHH-HHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHH
T ss_pred CCCcEEEEe-CCCChHHHHHHHHHHHhhcCCC-eEEEEeCCHHHH-HHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHH
Confidence 345566644 4556666653 34 576 699999999876 6666666543212347788888765321 1 11
Q ss_pred hhcC--CCCCee--EEEEcCC
Q 022298 224 QFVG--KDGPFD--YMSVTPP 240 (299)
Q Consensus 224 ~~~~--~~~~fD--lI~iDPP 240 (299)
.... ..+++| +++.+.-
T Consensus 81 ~~~~~~~~g~~d~~~lvnnAg 101 (259)
T 1oaa_A 81 AVRELPRPEGLQRLLLINNAA 101 (259)
T ss_dssp HHHHSCCCTTCCEEEEEECCC
T ss_pred HHHhccccccCCccEEEECCc
Confidence 1111 124678 8887754
No 445
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=64.46 E-value=28 Score=30.82 Aligned_cols=83 Identities=11% Similarity=0.042 Sum_probs=50.0
Q ss_pred CCCEEEEECCccchHHHHH----HHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCC-CcEEEEEcchhhHHHH--H-hhhc
Q 022298 155 RPGRWLDLYSGTGSVGIEA----ISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFL-DVSSIHTVRVETFLER--A-EQFV 226 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEA----lSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~-~~~~vi~~D~~~~l~~--~-~~~~ 226 (299)
.++++|=-| |+|.+|.+. +.+|+ +|+.++.+++.+ +.+.+.+...+.. .++.++.+|+.+...- . ....
T Consensus 25 ~~k~vlVTG-as~gIG~aia~~L~~~G~-~V~~~~r~~~~~-~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 101 (297)
T 1xhl_A 25 SGKSVIITG-SSNGIGRSAAVIFAKEGA-QVTITGRNEDRL-EETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTL 101 (297)
T ss_dssp TTCEEEETT-CSSHHHHHHHHHHHHTTC-EEEEEESCHHHH-HHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCEEEEeC-CCcHHHHHHHHHHHHCCC-EEEEEeCCHHHH-HHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHH
Confidence 456666544 566667654 35687 699999998876 6666666554321 1477888887643211 1 0001
Q ss_pred CCCCCeeEEEEcCC
Q 022298 227 GKDGPFDYMSVTPP 240 (299)
Q Consensus 227 ~~~~~fDlI~iDPP 240 (299)
...+..|+++.+.-
T Consensus 102 ~~~g~iD~lvnnAG 115 (297)
T 1xhl_A 102 AKFGKIDILVNNAG 115 (297)
T ss_dssp HHHSCCCEEEECCC
T ss_pred HhcCCCCEEEECCC
Confidence 11247899998764
No 446
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=64.42 E-value=25 Score=27.40 Aligned_cols=69 Identities=16% Similarity=0.031 Sum_probs=42.6
Q ss_pred CEEEEECCccchHHHHHH----HcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhH--HHHHhhhcCCCC
Q 022298 157 GRWLDLYSGTGSVGIEAI----SRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETF--LERAEQFVGKDG 230 (299)
Q Consensus 157 ~~VLDLfaGSGalgIEAl----SrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~--l~~~~~~~~~~~ 230 (299)
.+|+=+| .|.+|...+ ..|. .|+.+|.|++.+ +.+++ .| +.++.+|+.+. +... .-.
T Consensus 8 ~~viIiG--~G~~G~~la~~L~~~g~-~v~vid~~~~~~-~~~~~----~g----~~~i~gd~~~~~~l~~a-----~i~ 70 (140)
T 3fwz_A 8 NHALLVG--YGRVGSLLGEKLLASDI-PLVVIETSRTRV-DELRE----RG----VRAVLGNAANEEIMQLA-----HLE 70 (140)
T ss_dssp SCEEEEC--CSHHHHHHHHHHHHTTC-CEEEEESCHHHH-HHHHH----TT----CEEEESCTTSHHHHHHT-----TGG
T ss_pred CCEEEEC--cCHHHHHHHHHHHHCCC-CEEEEECCHHHH-HHHHH----cC----CCEEECCCCCHHHHHhc-----Ccc
Confidence 3555454 466665543 3576 599999999987 65543 33 45678887543 3221 124
Q ss_pred CeeEEEEcCCCC
Q 022298 231 PFDYMSVTPPYT 242 (299)
Q Consensus 231 ~fDlI~iDPPY~ 242 (299)
.+|+|++--|-.
T Consensus 71 ~ad~vi~~~~~~ 82 (140)
T 3fwz_A 71 CAKWLILTIPNG 82 (140)
T ss_dssp GCSEEEECCSCH
T ss_pred cCCEEEEECCCh
Confidence 689988776643
No 447
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=64.41 E-value=29 Score=30.57 Aligned_cols=83 Identities=12% Similarity=0.047 Sum_probs=48.1
Q ss_pred CCCCEEEEECCccchHHHH----HHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHH---Hhhhc
Q 022298 154 LRPGRWLDLYSGTGSVGIE----AISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLER---AEQFV 226 (299)
Q Consensus 154 ~~~~~VLDLfaGSGalgIE----AlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~---~~~~~ 226 (299)
+.++++|=-|++ |.+|.+ ++.+|+ +|+.++.+.....+.+.+-++..+ .++.++.+|+.+...- .....
T Consensus 45 l~gk~vlVTGas-~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~ 120 (291)
T 3ijr_A 45 LKGKNVLITGGD-SGIGRAVSIAFAKEGA-NIAIAYLDEEGDANETKQYVEKEG--VKCVLLPGDLSDEQHCKDIVQETV 120 (291)
T ss_dssp TTTCEEEEETTT-SHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHTTT--CCEEEEESCTTSHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCC-cHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHH
Confidence 467788877765 445554 446787 599999886532134444444444 3578888987653211 00011
Q ss_pred CCCCCeeEEEEcCC
Q 022298 227 GKDGPFDYMSVTPP 240 (299)
Q Consensus 227 ~~~~~fDlI~iDPP 240 (299)
...++.|+++.+.-
T Consensus 121 ~~~g~iD~lvnnAg 134 (291)
T 3ijr_A 121 RQLGSLNILVNNVA 134 (291)
T ss_dssp HHHSSCCEEEECCC
T ss_pred HHcCCCCEEEECCC
Confidence 11257899998753
No 448
>3cg4_A Response regulator receiver domain protein (CHEY-; structural genomics, unknown function; HET: MSE; 1.61A {Methanospirillum hungatei jf-1}
Probab=64.39 E-value=30 Score=25.87 Aligned_cols=54 Identities=17% Similarity=0.073 Sum_probs=38.7
Q ss_pred CCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCeeEEEEcCC
Q 022298 178 CSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPP 240 (299)
Q Consensus 178 a~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fDlI~iDPP 240 (299)
..+|..||-++... +.++.-++..|+. + ....+..+.+.... ...+|+|++|--
T Consensus 7 ~~~iLivdd~~~~~-~~l~~~L~~~g~~--v-~~~~~~~~a~~~l~-----~~~~dlii~d~~ 60 (142)
T 3cg4_A 7 KGDVMIVDDDAHVR-IAVKTILSDAGFH--I-ISADSGGQCIDLLK-----KGFSGVVLLDIM 60 (142)
T ss_dssp CCEEEEECSCHHHH-HHHHHHHHHTTCE--E-EEESSHHHHHHHHH-----TCCCEEEEEESC
T ss_pred CCeEEEEcCCHHHH-HHHHHHHHHCCeE--E-EEeCCHHHHHHHHH-----hcCCCEEEEeCC
Confidence 34799999999886 8888888887752 3 34456666665442 356999999953
No 449
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=64.23 E-value=59 Score=27.58 Aligned_cols=83 Identities=14% Similarity=0.103 Sum_probs=50.7
Q ss_pred CCCCEEEEECCccchHHHHHH----HcCCCEEEEEeC-CHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHH--HH-hhh
Q 022298 154 LRPGRWLDLYSGTGSVGIEAI----SRGCSEVHFVEM-DPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLE--RA-EQF 225 (299)
Q Consensus 154 ~~~~~VLDLfaGSGalgIEAl----SrGa~~V~~VD~-n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~--~~-~~~ 225 (299)
+.+.++| +-.|+|.+|.+.+ .+|+ +|++++. ++... +.+.+.++..+ .++.++.+|+.+... .. ...
T Consensus 19 ~~~k~vl-ItGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~-~~~~~~l~~~~--~~~~~~~~D~~~~~~~~~~~~~~ 93 (274)
T 1ja9_A 19 LAGKVAL-TTGAGRGIGRGIAIELGRRGA-SVVVNYGSSSKAA-EEVVAELKKLG--AQGVAIQADISKPSEVVALFDKA 93 (274)
T ss_dssp TTTCEEE-ETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHH-HHHHHHHHHTT--CCEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCCEEE-EeCCCchHHHHHHHHHHHCCC-EEEEEcCCchHHH-HHHHHHHHhcC--CcEEEEEecCCCHHHHHHHHHHH
Confidence 4566777 5556777786643 5687 6999998 77765 56666665544 347788888764321 11 000
Q ss_pred cCCCCCeeEEEEcCCC
Q 022298 226 VGKDGPFDYMSVTPPY 241 (299)
Q Consensus 226 ~~~~~~fDlI~iDPPY 241 (299)
....+.+|+|+.+.-+
T Consensus 94 ~~~~~~~d~vi~~Ag~ 109 (274)
T 1ja9_A 94 VSHFGGLDFVMSNSGM 109 (274)
T ss_dssp HHHHSCEEEEECCCCC
T ss_pred HHHcCCCCEEEECCCC
Confidence 0111478999977643
No 450
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=64.10 E-value=32 Score=29.16 Aligned_cols=82 Identities=13% Similarity=0.098 Sum_probs=49.0
Q ss_pred CCCEEEEECCccchHHHHH----HHcCCCEEEEEeC-CHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHH--HH-hhhc
Q 022298 155 RPGRWLDLYSGTGSVGIEA----ISRGCSEVHFVEM-DPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLE--RA-EQFV 226 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEA----lSrGa~~V~~VD~-n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~--~~-~~~~ 226 (299)
.++++| +-.|+|.+|.+. +.+|+ +|+.++. ++..+ +.+.+.++..+ .++.++.+|+.+... .. ....
T Consensus 3 ~~k~vl-VTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~-~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~ 77 (246)
T 2uvd_A 3 KGKVAL-VTGASRGIGRAIAIDLAKQGA-NVVVNYAGNEQKA-NEVVDEIKKLG--SDAIAVRADVANAEDVTNMVKQTV 77 (246)
T ss_dssp TTCEEE-ETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHH-HHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEE-EECCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHH-HHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHH
Confidence 456666 445667777654 35687 6999998 87766 55555565544 347788888764321 11 0000
Q ss_pred CCCCCeeEEEEcCCC
Q 022298 227 GKDGPFDYMSVTPPY 241 (299)
Q Consensus 227 ~~~~~fDlI~iDPPY 241 (299)
...+..|+++.+--+
T Consensus 78 ~~~g~id~lv~nAg~ 92 (246)
T 2uvd_A 78 DVFGQVDILVNNAGV 92 (246)
T ss_dssp HHHSCCCEEEECCCC
T ss_pred HHcCCCCEEEECCCC
Confidence 112478999987643
No 451
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=63.88 E-value=24 Score=30.85 Aligned_cols=82 Identities=10% Similarity=0.018 Sum_probs=47.5
Q ss_pred CCCCEEEEECCccchHHHH----HHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHH--HhhhcC
Q 022298 154 LRPGRWLDLYSGTGSVGIE----AISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLER--AEQFVG 227 (299)
Q Consensus 154 ~~~~~VLDLfaGSGalgIE----AlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~--~~~~~~ 227 (299)
+.++++|=-|+++ .+|.+ ++.+|+ +|+.++.+... +.+.+.+...+ .++.++.+|+.+...- ......
T Consensus 29 l~gk~~lVTGas~-GIG~aia~~la~~G~-~V~~~~r~~~~--~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~ 102 (273)
T 3uf0_A 29 LAGRTAVVTGAGS-GIGRAIAHGYARAGA-HVLAWGRTDGV--KEVADEIADGG--GSAEAVVADLADLEGAANVAEELA 102 (273)
T ss_dssp CTTCEEEEETTTS-HHHHHHHHHHHHTTC-EEEEEESSTHH--HHHHHHHHTTT--CEEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCc-HHHHHHHHHHHHCCC-EEEEEcCHHHH--HHHHHHHHhcC--CcEEEEEecCCCHHHHHHHHHHHH
Confidence 5678888777654 44544 456788 69999966543 33444444333 3577888887654211 110001
Q ss_pred CCCCeeEEEEcCCC
Q 022298 228 KDGPFDYMSVTPPY 241 (299)
Q Consensus 228 ~~~~fDlI~iDPPY 241 (299)
..++.|+++.+.-.
T Consensus 103 ~~g~iD~lv~nAg~ 116 (273)
T 3uf0_A 103 ATRRVDVLVNNAGI 116 (273)
T ss_dssp HHSCCCEEEECCCC
T ss_pred hcCCCcEEEECCCC
Confidence 12578999987643
No 452
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=63.64 E-value=23 Score=27.31 Aligned_cols=53 Identities=21% Similarity=0.081 Sum_probs=38.7
Q ss_pred CEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCeeEEEEcCC
Q 022298 179 SEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPP 240 (299)
Q Consensus 179 ~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fDlI~iDPP 240 (299)
.+|..||-++... +.++.-++..|+. + ....+..+.+.... ...+|+|++|--
T Consensus 8 ~~ILivdd~~~~~-~~l~~~L~~~g~~--v-~~~~~~~~al~~l~-----~~~~dlii~D~~ 60 (154)
T 3gt7_A 8 GEILIVEDSPTQA-EHLKHILEETGYQ--T-EHVRNGREAVRFLS-----LTRPDLIISDVL 60 (154)
T ss_dssp CEEEEECSCHHHH-HHHHHHHHTTTCE--E-EEESSHHHHHHHHT-----TCCCSEEEEESC
T ss_pred CcEEEEeCCHHHH-HHHHHHHHHCCCE--E-EEeCCHHHHHHHHH-----hCCCCEEEEeCC
Confidence 4799999999986 8888888877652 3 34466666665542 457999999964
No 453
>3lte_A Response regulator; structural genomics, PSI, protein structure initiative, NYSG YORK structural genomix research consortium, nysgxrc; 2.00A {Bermanella marisrubri}
Probab=63.24 E-value=24 Score=26.07 Aligned_cols=54 Identities=7% Similarity=-0.111 Sum_probs=38.5
Q ss_pred CEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCeeEEEEcCCC
Q 022298 179 SEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPY 241 (299)
Q Consensus 179 ~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fDlI~iDPPY 241 (299)
.+|..||-++... +.++.-++..|+. + ....+..+.+.... ...+|+|++|.--
T Consensus 7 ~~ilivdd~~~~~-~~l~~~L~~~g~~--v-~~~~~~~~a~~~l~-----~~~~dlii~d~~l 60 (132)
T 3lte_A 7 KRILVVDDDQAMA-AAIERVLKRDHWQ--V-EIAHNGFDAGIKLS-----TFEPAIMTLDLSM 60 (132)
T ss_dssp CEEEEECSCHHHH-HHHHHHHHHTTCE--E-EEESSHHHHHHHHH-----HTCCSEEEEESCB
T ss_pred ccEEEEECCHHHH-HHHHHHHHHCCcE--E-EEeCCHHHHHHHHH-----hcCCCEEEEecCC
Confidence 4799999999986 8888888876652 3 34566666655442 3579999999743
No 454
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=63.17 E-value=21 Score=31.11 Aligned_cols=81 Identities=14% Similarity=0.144 Sum_probs=47.9
Q ss_pred CCCCEEEEECCccchHHHH----HHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHH---hhhc
Q 022298 154 LRPGRWLDLYSGTGSVGIE----AISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERA---EQFV 226 (299)
Q Consensus 154 ~~~~~VLDLfaGSGalgIE----AlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~---~~~~ 226 (299)
+.++++|=-|++ |.+|.+ ++.+|+ +|+.+|.+...+ +.+.+.+ + .++.++.+|+.+...-. ....
T Consensus 9 l~~k~vlVTGas-~gIG~aia~~l~~~G~-~V~~~~r~~~~~-~~~~~~~---~--~~~~~~~~Dv~~~~~v~~~~~~~~ 80 (271)
T 3tzq_B 9 LENKVAIITGAC-GGIGLETSRVLARAGA-RVVLADLPETDL-AGAAASV---G--RGAVHHVVDLTNEVSVRALIDFTI 80 (271)
T ss_dssp TTTCEEEEETTT-SHHHHHHHHHHHHTTC-EEEEEECTTSCH-HHHHHHH---C--TTCEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEECCC-cHHHHHHHHHHHHCCC-EEEEEcCCHHHH-HHHHHHh---C--CCeEEEECCCCCHHHHHHHHHHHH
Confidence 467778866655 445544 446787 699999998776 4444333 3 23667888875432111 0011
Q ss_pred CCCCCeeEEEEcCCCC
Q 022298 227 GKDGPFDYMSVTPPYT 242 (299)
Q Consensus 227 ~~~~~fDlI~iDPPY~ 242 (299)
...++.|+++.+.-+.
T Consensus 81 ~~~g~id~lv~nAg~~ 96 (271)
T 3tzq_B 81 DTFGRLDIVDNNAAHS 96 (271)
T ss_dssp HHHSCCCEEEECCCCC
T ss_pred HHcCCCCEEEECCCCC
Confidence 1124789999876543
No 455
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=62.91 E-value=12 Score=33.94 Aligned_cols=38 Identities=16% Similarity=0.057 Sum_probs=27.9
Q ss_pred CCCEEEEECCccchHHHHHH----HcCCCEEEEEeCCHHHHHHHHH
Q 022298 155 RPGRWLDLYSGTGSVGIEAI----SRGCSEVHFVEMDPWVVSNVLI 196 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAl----SrGa~~V~~VD~n~~Al~~~a~ 196 (299)
.+.+||-.|+| .+|+.++ .+|+ +|+++|.+++.+ +.++
T Consensus 164 ~g~~VlV~GaG--~vG~~~~~~a~~~Ga-~Vi~~~~~~~~~-~~~~ 205 (339)
T 1rjw_A 164 PGEWVAIYGIG--GLGHVAVQYAKAMGL-NVVAVDIGDEKL-ELAK 205 (339)
T ss_dssp TTCEEEEECCS--TTHHHHHHHHHHTTC-EEEEECSCHHHH-HHHH
T ss_pred CCCEEEEECCC--HHHHHHHHHHHHcCC-EEEEEeCCHHHH-HHHH
Confidence 57899999884 3554433 3688 799999999876 6664
No 456
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=62.91 E-value=25 Score=30.58 Aligned_cols=83 Identities=12% Similarity=0.089 Sum_probs=49.1
Q ss_pred CCCCEEEEECCccchHHHH----HHHcCCCEEEEEeCCHHH-------HHHHHHHHHHHhCCCCcEEEEEcchhhHHHH-
Q 022298 154 LRPGRWLDLYSGTGSVGIE----AISRGCSEVHFVEMDPWV-------VSNVLIPNLEWTGFLDVSSIHTVRVETFLER- 221 (299)
Q Consensus 154 ~~~~~VLDLfaGSGalgIE----AlSrGa~~V~~VD~n~~A-------l~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~- 221 (299)
+.++++|=-|+++ .+|.+ ++.+|+ +|+.++.+... + +.+.+.++..+ .++.++.+|+.+...-
T Consensus 4 l~~k~~lVTGas~-GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~ 78 (274)
T 3e03_A 4 LSGKTLFITGASR-GIGLAIALRAARDGA-NVAIAAKSAVANPKLPGTI-HSAAAAVNAAG--GQGLALKCDIREEDQVR 78 (274)
T ss_dssp CTTCEEEEETTTS-HHHHHHHHHHHHTTC-EEEEEESCCSCCTTSCCCH-HHHHHHHHHHT--SEEEEEECCTTCHHHHH
T ss_pred CCCcEEEEECCCC-hHHHHHHHHHHHCCC-EEEEEeccchhhhhhHHHH-HHHHHHHHhcC--CeEEEEeCCCCCHHHHH
Confidence 5677888777664 45544 446787 69999988642 3 33444444444 3577888887643211
Q ss_pred -H-hhhcCCCCCeeEEEEcCCC
Q 022298 222 -A-EQFVGKDGPFDYMSVTPPY 241 (299)
Q Consensus 222 -~-~~~~~~~~~fDlI~iDPPY 241 (299)
. .......++.|+++.+.-.
T Consensus 79 ~~~~~~~~~~g~iD~lvnnAG~ 100 (274)
T 3e03_A 79 AAVAATVDTFGGIDILVNNASA 100 (274)
T ss_dssp HHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHcCCCCEEEECCCc
Confidence 0 1111112578999988743
No 457
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=62.80 E-value=20 Score=26.38 Aligned_cols=52 Identities=15% Similarity=0.072 Sum_probs=37.1
Q ss_pred EEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCeeEEEEcCC
Q 022298 180 EVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPP 240 (299)
Q Consensus 180 ~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fDlI~iDPP 240 (299)
+|..||-++... +.++.-++..|+. + ....+..+.+.... ...+|+|++|--
T Consensus 5 ~ilivdd~~~~~-~~l~~~L~~~g~~--v-~~~~~~~~a~~~l~-----~~~~dlii~D~~ 56 (127)
T 3i42_A 5 QALIVEDYQAAA-ETFKELLEMLGFQ--A-DYVMSGTDALHAMS-----TRGYDAVFIDLN 56 (127)
T ss_dssp EEEEECSCHHHH-HHHHHHHHHTTEE--E-EEESSHHHHHHHHH-----HSCCSEEEEESB
T ss_pred eEEEEcCCHHHH-HHHHHHHHHcCCC--E-EEECCHHHHHHHHH-----hcCCCEEEEeCC
Confidence 689999999886 8888888887651 2 23456666655442 256999999964
No 458
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=62.66 E-value=17 Score=33.11 Aligned_cols=61 Identities=18% Similarity=0.135 Sum_probs=39.8
Q ss_pred CCCCEEEEECCc-cchHHHHHHH-cCCCEEEEEeCCH------------------HHHHHHHHHHHHHhCCCCcEEEEEc
Q 022298 154 LRPGRWLDLYSG-TGSVGIEAIS-RGCSEVHFVEMDP------------------WVVSNVLIPNLEWTGFLDVSSIHTV 213 (299)
Q Consensus 154 ~~~~~VLDLfaG-SGalgIEAlS-rGa~~V~~VD~n~------------------~Al~~~a~~N~~~~g~~~~~~vi~~ 213 (299)
+...+||=+||| .|+-.++.|. .|..+++.+|.|. .-+ +.+++.++.++-.-+++.+..
T Consensus 34 L~~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka-~aa~~~L~~iNP~v~v~~~~~ 112 (292)
T 3h8v_A 34 IRTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKV-QAAEHTLRNINPDVLFEVHNY 112 (292)
T ss_dssp GGGCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHH-HHHHHHHHHHCTTSEEEEECC
T ss_pred HhCCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHH-HHHHHHHHhhCCCcEEEEecc
Confidence 457899988776 4555555444 4989999999876 333 567777777664333455544
Q ss_pred ch
Q 022298 214 RV 215 (299)
Q Consensus 214 D~ 215 (299)
++
T Consensus 113 ~l 114 (292)
T 3h8v_A 113 NI 114 (292)
T ss_dssp CT
T ss_pred cC
Confidence 43
No 459
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=62.39 E-value=38 Score=28.70 Aligned_cols=81 Identities=10% Similarity=0.002 Sum_probs=48.9
Q ss_pred CCCEEEEECCccchHHHHH----HHcCCCEEEEEeC-CHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHH---Hhhhc
Q 022298 155 RPGRWLDLYSGTGSVGIEA----ISRGCSEVHFVEM-DPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLER---AEQFV 226 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEA----lSrGa~~V~~VD~-n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~---~~~~~ 226 (299)
.+.++|= -.|+|.+|.+. +.+|+ +|++++. ++... +.+.+.++..+ .++.++.+|+.+...- .....
T Consensus 6 ~~k~vlI-TGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~-~~~~~~l~~~~--~~~~~~~~D~~~~~~~~~~~~~~~ 80 (261)
T 1gee_A 6 EGKVVVI-TGSSTGLGKSMAIRFATEKA-KVVVNYRSKEDEA-NSVLEEIKKVG--GEAIAVKGDVTVESDVINLVQSAI 80 (261)
T ss_dssp TTCEEEE-TTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHH-HHHHHHHHHTT--CEEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCEEEE-eCCCChHHHHHHHHHHHCCC-EEEEEcCCChHHH-HHHHHHHHhcC--CceEEEECCCCCHHHHHHHHHHHH
Confidence 4566664 45667777654 35687 6999999 77765 56666665544 3477888887643211 11011
Q ss_pred CCCCCeeEEEEcCC
Q 022298 227 GKDGPFDYMSVTPP 240 (299)
Q Consensus 227 ~~~~~fDlI~iDPP 240 (299)
...+.+|+||.+.-
T Consensus 81 ~~~g~id~li~~Ag 94 (261)
T 1gee_A 81 KEFGKLDVMINNAG 94 (261)
T ss_dssp HHHSCCCEEEECCC
T ss_pred HHcCCCCEEEECCC
Confidence 11146899998754
No 460
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=62.27 E-value=21 Score=30.05 Aligned_cols=81 Identities=14% Similarity=0.090 Sum_probs=47.9
Q ss_pred CCCCEEEEECCccchHHHHH----HHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHH--H-Hhhhc
Q 022298 154 LRPGRWLDLYSGTGSVGIEA----ISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLE--R-AEQFV 226 (299)
Q Consensus 154 ~~~~~VLDLfaGSGalgIEA----lSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~--~-~~~~~ 226 (299)
+.+.++| +-.|+|.+|.+. +.+|+ +|++++.++... +.+.+.+ ....++.++.+|+.+... . .....
T Consensus 4 ~~~k~vl-VtGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~-~~~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~~~~ 77 (251)
T 1zk4_A 4 LDGKVAI-ITGGTLGIGLAIATKFVEEGA-KVMITGRHSDVG-EKAAKSV---GTPDQIQFFQHDSSDEDGWTKLFDATE 77 (251)
T ss_dssp TTTCEEE-ETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHH-HHHHHHH---CCTTTEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCcEEE-EeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHH-HHHHHHh---hccCceEEEECCCCCHHHHHHHHHHHH
Confidence 3456666 445677777664 35687 599999998765 5444443 222457888888764321 1 11000
Q ss_pred CCCCCeeEEEEcCC
Q 022298 227 GKDGPFDYMSVTPP 240 (299)
Q Consensus 227 ~~~~~fDlI~iDPP 240 (299)
...+++|+||.+.-
T Consensus 78 ~~~~~id~li~~Ag 91 (251)
T 1zk4_A 78 KAFGPVSTLVNNAG 91 (251)
T ss_dssp HHHSSCCEEEECCC
T ss_pred HHhCCCCEEEECCC
Confidence 11246899998764
No 461
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=62.16 E-value=1.8 Score=40.93 Aligned_cols=78 Identities=13% Similarity=0.122 Sum_probs=47.8
Q ss_pred CCEEEEECCccchHHHHHHHc------------CC-----CEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhH
Q 022298 156 PGRWLDLYSGTGSVGIEAISR------------GC-----SEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETF 218 (299)
Q Consensus 156 ~~~VLDLfaGSGalgIEAlSr------------Ga-----~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~ 218 (299)
.-+|+|+||++|..++.+++. |. -+|++.|+-.... +.+-+++..+.-..+..++.+....|
T Consensus 52 ~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDF-ntlF~~L~~~~~~~~~~f~~gvpgSF 130 (359)
T 1m6e_X 52 RLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDF-NAIFRSLPIENDVDGVCFINGVPGSF 130 (359)
T ss_dssp EECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCH-HHHHTTTTTSCSCTTCEEEEEEESCS
T ss_pred ceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHH-HHHHHhcchhcccCCCEEEEecchhh
Confidence 457999999999777654432 21 3688999877776 77777765432111123555555554
Q ss_pred HHHHhhhcCCCCCeeEEEEc
Q 022298 219 LERAEQFVGKDGPFDYMSVT 238 (299)
Q Consensus 219 l~~~~~~~~~~~~fDlI~iD 238 (299)
-.++ -+.+.+|+|+..
T Consensus 131 y~rl----fp~~S~d~v~Ss 146 (359)
T 1m6e_X 131 YGRL----FPRNTLHFIHSS 146 (359)
T ss_dssp SSCC----SCTTCBSCEEEE
T ss_pred hhcc----CCCCceEEEEeh
Confidence 3221 235789999864
No 462
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=62.11 E-value=24 Score=28.69 Aligned_cols=62 Identities=15% Similarity=0.113 Sum_probs=32.8
Q ss_pred HHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCeeEEEEcCCCCC
Q 022298 173 AISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTA 243 (299)
Q Consensus 173 AlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fDlI~iDPPY~~ 243 (299)
++.+|. +|..||.|+..- ...- +. .. .....++..+-..+...+..+ ...||+|++|-|-..
T Consensus 26 la~~g~-~vlliD~D~~~~--~~~~-~~-~~-~~~~~~~~~~~~~l~~~l~~l---~~~yD~viiD~~~~~ 87 (206)
T 4dzz_A 26 LSRSGY-NIAVVDTDPQMS--LTNW-SK-AG-KAAFDVFTAASEKDVYGIRKD---LADYDFAIVDGAGSL 87 (206)
T ss_dssp HHHTTC-CEEEEECCTTCH--HHHH-HT-TS-CCSSEEEECCSHHHHHTHHHH---TTTSSEEEEECCSSS
T ss_pred HHHCCC-eEEEEECCCCCC--HHHH-Hh-cC-CCCCcEEecCcHHHHHHHHHh---cCCCCEEEEECCCCC
Confidence 334565 599999998753 2211 11 11 223556654432222221111 357999999987554
No 463
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=62.04 E-value=14 Score=33.18 Aligned_cols=74 Identities=14% Similarity=-0.025 Sum_probs=41.4
Q ss_pred CCCEEEEECCccchHHHHHH----HcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCC
Q 022298 155 RPGRWLDLYSGTGSVGIEAI----SRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDG 230 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAl----SrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~ 230 (299)
.+.+||-.+ |+|.+|..++ .+|+ +|++++.+++.+ +.+++ +|.. .++..+-.++........ .+.
T Consensus 140 ~g~~VlV~G-a~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~-~~~~~----~Ga~---~~~~~~~~~~~~~~~~~~-~~~ 208 (325)
T 3jyn_A 140 PGEIILFHA-AAGGVGSLACQWAKALGA-KLIGTVSSPEKA-AHAKA----LGAW---ETIDYSHEDVAKRVLELT-DGK 208 (325)
T ss_dssp TTCEEEESS-TTSHHHHHHHHHHHHHTC-EEEEEESSHHHH-HHHHH----HTCS---EEEETTTSCHHHHHHHHT-TTC
T ss_pred CCCEEEEEc-CCcHHHHHHHHHHHHCCC-EEEEEeCCHHHH-HHHHH----cCCC---EEEeCCCccHHHHHHHHh-CCC
Confidence 467887554 4556665543 3688 799999999886 66653 5642 233322222222221111 234
Q ss_pred CeeEEEEcC
Q 022298 231 PFDYMSVTP 239 (299)
Q Consensus 231 ~fDlI~iDP 239 (299)
.+|+||-.-
T Consensus 209 g~Dvvid~~ 217 (325)
T 3jyn_A 209 KCPVVYDGV 217 (325)
T ss_dssp CEEEEEESS
T ss_pred CceEEEECC
Confidence 799987543
No 464
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=61.92 E-value=35 Score=29.07 Aligned_cols=82 Identities=15% Similarity=0.161 Sum_probs=49.8
Q ss_pred CCCCEEEEECCccchHHHHH----HHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHH--HH-hhhc
Q 022298 154 LRPGRWLDLYSGTGSVGIEA----ISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLE--RA-EQFV 226 (299)
Q Consensus 154 ~~~~~VLDLfaGSGalgIEA----lSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~--~~-~~~~ 226 (299)
+.+.++| +-.|+|.+|.+. +.+|+ +|++++.++..+ +.+.+.++..+ .++.++.+|+.+... .. ....
T Consensus 12 l~~k~vl-ITGasggiG~~la~~l~~~G~-~V~~~~r~~~~~-~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~ 86 (266)
T 1xq1_A 12 LKAKTVL-VTGGTKGIGHAIVEEFAGFGA-VIHTCARNEYEL-NECLSKWQKKG--FQVTGSVCDASLRPEREKLMQTVS 86 (266)
T ss_dssp CTTCEEE-ETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHH-HHHHHHHHHTT--CCEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCEEE-EECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHH-HHHHHHHHhcC--CeeEEEECCCCCHHHHHHHHHHHH
Confidence 3566676 445577777654 35687 699999998876 66666665544 247788888764321 11 0000
Q ss_pred CC-CCCeeEEEEcCC
Q 022298 227 GK-DGPFDYMSVTPP 240 (299)
Q Consensus 227 ~~-~~~fDlI~iDPP 240 (299)
.. .++.|+||.+--
T Consensus 87 ~~~~~~id~li~~Ag 101 (266)
T 1xq1_A 87 SMFGGKLDILINNLG 101 (266)
T ss_dssp HHHTTCCSEEEEECC
T ss_pred HHhCCCCcEEEECCC
Confidence 00 156899997653
No 465
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=61.88 E-value=33 Score=29.80 Aligned_cols=80 Identities=13% Similarity=0.006 Sum_probs=47.9
Q ss_pred CCCCEEEEECCccchHHHH----HHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHH---hhhc
Q 022298 154 LRPGRWLDLYSGTGSVGIE----AISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERA---EQFV 226 (299)
Q Consensus 154 ~~~~~VLDLfaGSGalgIE----AlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~---~~~~ 226 (299)
+.++++|=-|+ +|.+|.+ ++.+|+ +|+.++.+...+ +.+.+ .++ .++.++.+|+.+...-. ....
T Consensus 25 l~gk~vlVTGa-s~gIG~aia~~la~~G~-~V~~~~r~~~~~-~~~~~---~~~--~~~~~~~~Dv~d~~~v~~~~~~~~ 96 (266)
T 3grp_A 25 LTGRKALVTGA-TGGIGEAIARCFHAQGA-IVGLHGTREDKL-KEIAA---DLG--KDVFVFSANLSDRKSIKQLAEVAE 96 (266)
T ss_dssp CTTCEEEESST-TSHHHHHHHHHHHHTTC-EEEEEESCHHHH-HHHHH---HHC--SSEEEEECCTTSHHHHHHHHHHHH
T ss_pred cCCCEEEEeCC-CcHHHHHHHHHHHHCCC-EEEEEeCCHHHH-HHHHH---HhC--CceEEEEeecCCHHHHHHHHHHHH
Confidence 45677775554 5556655 345787 699999998876 44433 334 34778888876532111 0011
Q ss_pred CCCCCeeEEEEcCCC
Q 022298 227 GKDGPFDYMSVTPPY 241 (299)
Q Consensus 227 ~~~~~fDlI~iDPPY 241 (299)
...++.|+++.+.-.
T Consensus 97 ~~~g~iD~lvnnAg~ 111 (266)
T 3grp_A 97 REMEGIDILVNNAGI 111 (266)
T ss_dssp HHHTSCCEEEECCCC
T ss_pred HHcCCCCEEEECCCC
Confidence 112578999988654
No 466
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=61.80 E-value=46 Score=27.85 Aligned_cols=77 Identities=17% Similarity=0.142 Sum_probs=45.9
Q ss_pred CCCCEEEEECCccchHHHHH----HHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCC
Q 022298 154 LRPGRWLDLYSGTGSVGIEA----ISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKD 229 (299)
Q Consensus 154 ~~~~~VLDLfaGSGalgIEA----lSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~ 229 (299)
+.+.++|=.| |+|.+|.+. +.+|+ +|+.++.++..+ +.+.+. +. ..+++.+|+.+...-. .+....
T Consensus 5 l~~k~vlITG-asggiG~~~a~~l~~~G~-~V~~~~r~~~~~-~~~~~~---~~---~~~~~~~D~~~~~~~~-~~~~~~ 74 (244)
T 3d3w_A 5 LAGRRVLVTG-AGKGIGRGTVQALHATGA-RVVAVSRTQADL-DSLVRE---CP---GIEPVCVDLGDWEATE-RALGSV 74 (244)
T ss_dssp CTTCEEEEES-TTSHHHHHHHHHHHHTTC-EEEEEESCHHHH-HHHHHH---ST---TCEEEECCTTCHHHHH-HHHTTC
T ss_pred cCCcEEEEEC-CCcHHHHHHHHHHHHCCC-EEEEEeCCHHHH-HHHHHH---cC---CCCEEEEeCCCHHHHH-HHHHHc
Confidence 4567777554 456667654 35687 699999998765 444332 21 2456788876543211 122223
Q ss_pred CCeeEEEEcCC
Q 022298 230 GPFDYMSVTPP 240 (299)
Q Consensus 230 ~~fDlI~iDPP 240 (299)
+..|+||.+.-
T Consensus 75 ~~id~vi~~Ag 85 (244)
T 3d3w_A 75 GPVDLLVNNAA 85 (244)
T ss_dssp CCCCEEEECCC
T ss_pred CCCCEEEECCc
Confidence 46899997764
No 467
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=61.66 E-value=25 Score=32.05 Aligned_cols=68 Identities=15% Similarity=0.065 Sum_probs=42.4
Q ss_pred CCCEEEEECCccchHHHHHH----HcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchh-hHHHHHhhhcCCC
Q 022298 155 RPGRWLDLYSGTGSVGIEAI----SRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVE-TFLERAEQFVGKD 229 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAl----SrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~-~~l~~~~~~~~~~ 229 (299)
.+.+||-.|+ |.+|+.++ .+|+ +|+++|.+++.+ +.+++ +|.. .++..+-. ++.... .
T Consensus 179 ~g~~VlV~Ga--G~vG~~~~qlak~~Ga-~Vi~~~~~~~~~-~~~~~----lGa~---~v~~~~~~~~~~~~~------~ 241 (360)
T 1piw_A 179 PGKKVGIVGL--GGIGSMGTLISKAMGA-ETYVISRSSRKR-EDAMK----MGAD---HYIATLEEGDWGEKY------F 241 (360)
T ss_dssp TTCEEEEECC--SHHHHHHHHHHHHHTC-EEEEEESSSTTH-HHHHH----HTCS---EEEEGGGTSCHHHHS------C
T ss_pred CCCEEEEECC--CHHHHHHHHHHHHCCC-EEEEEcCCHHHH-HHHHH----cCCC---EEEcCcCchHHHHHh------h
Confidence 5789999987 56665543 3688 599999988876 66654 5643 23333222 333221 1
Q ss_pred CCeeEEEEcC
Q 022298 230 GPFDYMSVTP 239 (299)
Q Consensus 230 ~~fDlI~iDP 239 (299)
+.+|+||-.-
T Consensus 242 ~~~D~vid~~ 251 (360)
T 1piw_A 242 DTFDLIVVCA 251 (360)
T ss_dssp SCEEEEEECC
T ss_pred cCCCEEEECC
Confidence 4799988543
No 468
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=61.64 E-value=12 Score=34.92 Aligned_cols=74 Identities=12% Similarity=-0.005 Sum_probs=52.6
Q ss_pred CCCEEEEECCccchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCc-EEEEEcchhhHHHHHhhhcCCCCCee
Q 022298 155 RPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDV-SSIHTVRVETFLERAEQFVGKDGPFD 233 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~-~~vi~~D~~~~l~~~~~~~~~~~~fD 233 (299)
.+.+||.+..+.|++++.+... .++.+.=+.-+. ..++.|++.+++.+. +++... .+ .....||
T Consensus 38 ~~~~~~~~~d~~gal~~~~~~~---~~~~~~ds~~~~-~~~~~n~~~~~~~~~~~~~~~~--~~---------~~~~~~~ 102 (375)
T 4dcm_A 38 IRGPVLILNDAFGALSCALAEH---KPYSIGDSYISE-LATRENLRLNGIDESSVKFLDS--TA---------DYPQQPG 102 (375)
T ss_dssp CCSCEEEECCSSSHHHHHTGGG---CCEEEESCHHHH-HHHHHHHHHTTCCGGGSEEEET--TS---------CCCSSCS
T ss_pred CCCCEEEECCCCCHHHHhhccC---CceEEEhHHHHH-HHHHHHHHHcCCCccceEeccc--cc---------ccccCCC
Confidence 3568999999999999876443 356665577775 789999999998642 444321 11 1136799
Q ss_pred EEEEcCCCCC
Q 022298 234 YMSVTPPYTA 243 (299)
Q Consensus 234 lI~iDPPY~~ 243 (299)
+|++-.|-..
T Consensus 103 ~v~~~lpk~~ 112 (375)
T 4dcm_A 103 VVLIKVPKTL 112 (375)
T ss_dssp EEEEECCSCH
T ss_pred EEEEEcCCCH
Confidence 9999999764
No 469
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=61.53 E-value=16 Score=27.36 Aligned_cols=54 Identities=22% Similarity=-0.020 Sum_probs=38.5
Q ss_pred CCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCeeEEEEcC
Q 022298 178 CSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDYMSVTP 239 (299)
Q Consensus 178 a~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fDlI~iDP 239 (299)
..+|..||-++... +.++.-++..|+. +.....+..+.+.... ...+|+|++|-
T Consensus 9 ~~~iLivdd~~~~~-~~l~~~L~~~g~~--v~~~~~~~~~a~~~~~-----~~~~dlii~d~ 62 (140)
T 3cg0_A 9 LPGVLIVEDGRLAA-ATLRIQLESLGYD--VLGVFDNGEEAVRCAP-----DLRPDIALVDI 62 (140)
T ss_dssp CCEEEEECCBHHHH-HHHHHHHHHHTCE--EEEEESSHHHHHHHHH-----HHCCSEEEEES
T ss_pred CceEEEEECCHHHH-HHHHHHHHHCCCe--eEEEECCHHHHHHHHH-----hCCCCEEEEec
Confidence 34799999999986 8888888887752 3223566666665442 24699999995
No 470
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...
Probab=61.53 E-value=21 Score=31.22 Aligned_cols=82 Identities=10% Similarity=0.027 Sum_probs=46.9
Q ss_pred CCCCEEEEECCccchHHHHH----HHcCCCEEEEEeCCH-HHHHHHHHHHHH-HhCCCCcEEEEEcchhh----HH--HH
Q 022298 154 LRPGRWLDLYSGTGSVGIEA----ISRGCSEVHFVEMDP-WVVSNVLIPNLE-WTGFLDVSSIHTVRVET----FL--ER 221 (299)
Q Consensus 154 ~~~~~VLDLfaGSGalgIEA----lSrGa~~V~~VD~n~-~Al~~~a~~N~~-~~g~~~~~~vi~~D~~~----~l--~~ 221 (299)
+.+.++|=-| |+|.+|.+. +.+|+ +|+.++.+. ..+ +.+.+.++ ..+ .++.++.+|+.+ .. ..
T Consensus 21 l~~k~~lVTG-as~gIG~aia~~L~~~G~-~V~~~~r~~~~~~-~~~~~~l~~~~~--~~~~~~~~Dv~~~~~~~~~v~~ 95 (288)
T 2x9g_A 21 MEAPAAVVTG-AAKRIGRAIAVKLHQTGY-RVVIHYHNSAEAA-VSLADELNKERS--NTAVVCQADLTNSNVLPASCEE 95 (288)
T ss_dssp -CCCEEEETT-CSSHHHHHHHHHHHHHTC-EEEEEESSCHHHH-HHHHHHHHHHST--TCEEEEECCCSCSTTHHHHHHH
T ss_pred CCCCEEEEeC-CCCHHHHHHHHHHHHCCC-eEEEEeCCchHHH-HHHHHHHHhhcC--CceEEEEeecCCccCCHHHHHH
Confidence 3456666555 456666553 45687 699999987 655 44544444 333 347788888765 21 11
Q ss_pred H-hhhcCCCCCeeEEEEcCC
Q 022298 222 A-EQFVGKDGPFDYMSVTPP 240 (299)
Q Consensus 222 ~-~~~~~~~~~fDlI~iDPP 240 (299)
. .......++.|++|.+.-
T Consensus 96 ~~~~~~~~~g~iD~lvnnAG 115 (288)
T 2x9g_A 96 IINSCFRAFGRCDVLVNNAS 115 (288)
T ss_dssp HHHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHhcCCCCEEEECCC
Confidence 1 001111247899998764
No 471
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=61.36 E-value=7.9 Score=35.22 Aligned_cols=39 Identities=10% Similarity=0.026 Sum_probs=28.9
Q ss_pred CCEEEEECCccchHHHHHH----HcCCCEEEEEeCCHHHHHHHHH
Q 022298 156 PGRWLDLYSGTGSVGIEAI----SRGCSEVHFVEMDPWVVSNVLI 196 (299)
Q Consensus 156 ~~~VLDLfaGSGalgIEAl----SrGa~~V~~VD~n~~Al~~~a~ 196 (299)
+..++=+.+|+|.+|+.++ .+|+ +|++++.+++.+ +.++
T Consensus 164 g~~~vli~gg~g~vG~~a~qla~~~Ga-~Vi~~~~~~~~~-~~~~ 206 (349)
T 3pi7_A 164 GEKAFVMTAGASQLCKLIIGLAKEEGF-RPIVTVRRDEQI-ALLK 206 (349)
T ss_dssp CCSEEEESSTTSHHHHHHHHHHHHHTC-EEEEEESCGGGH-HHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHH-HHHH
Confidence 4334447788888887754 3688 799999998886 7765
No 472
>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2
Probab=61.23 E-value=30 Score=31.21 Aligned_cols=58 Identities=12% Similarity=0.045 Sum_probs=37.8
Q ss_pred CCCEEEEECCccchHHHHH----HHcCCCEEEEEe-CCHHHHHHHHHHHHH-HhCCCCcEEEEEcchhh
Q 022298 155 RPGRWLDLYSGTGSVGIEA----ISRGCSEVHFVE-MDPWVVSNVLIPNLE-WTGFLDVSSIHTVRVET 217 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEA----lSrGa~~V~~VD-~n~~Al~~~a~~N~~-~~g~~~~~~vi~~D~~~ 217 (299)
.++++| +-.|+|.+|.+. +.+|+ +|+.++ .++..+ +.+.+.++ ..+ .++.++.+|+.+
T Consensus 45 ~~k~~l-VTGas~GIG~aia~~La~~G~-~Vv~~~~r~~~~~-~~~~~~l~~~~~--~~~~~~~~Dl~d 108 (328)
T 2qhx_A 45 TVPVAL-VTGAAKRLGRSIAEGLHAEGY-AVCLHYHRSAAEA-NALSATLNARRP--NSAITVQADLSN 108 (328)
T ss_dssp CCCEEE-ETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHH-HHHHHHHHHHST--TCEEEEECCCSS
T ss_pred CCCEEE-EECCCCHHHHHHHHHHHHCCC-EEEEEcCCCHHHH-HHHHHHHHhhcC--CeEEEEEeeCCC
Confidence 456666 445566777654 35687 699999 998876 66655554 333 347778887654
No 473
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=61.09 E-value=31 Score=29.56 Aligned_cols=80 Identities=16% Similarity=0.109 Sum_probs=46.4
Q ss_pred CCCCEEEEECCccchHHHH----HHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHH--HH-hhhc
Q 022298 154 LRPGRWLDLYSGTGSVGIE----AISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLE--RA-EQFV 226 (299)
Q Consensus 154 ~~~~~VLDLfaGSGalgIE----AlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~--~~-~~~~ 226 (299)
+.++++|=.|+ +|.+|.+ ++.+|+ +|+.++.+++.+ +.+.+.+ + .++.++.+|+.+... .. ....
T Consensus 3 l~~k~vlVTGa-s~gIG~~ia~~l~~~G~-~V~~~~r~~~~~-~~~~~~~---~--~~~~~~~~D~~~~~~~~~~~~~~~ 74 (254)
T 1hdc_A 3 LSGKTVIITGG-ARGLGAEAARQAVAAGA-RVVLADVLDEEG-AATAREL---G--DAARYQHLDVTIEEDWQRVVAYAR 74 (254)
T ss_dssp CCCSEEEEETT-TSHHHHHHHHHHHHTTC-EEEEEESCHHHH-HHHHHTT---G--GGEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEECC-CcHHHHHHHHHHHHCCC-EEEEEeCCHHHH-HHHHHHh---C--CceeEEEecCCCHHHHHHHHHHHH
Confidence 45677776665 5556654 345787 699999998765 4443322 2 346778888754321 11 0001
Q ss_pred CCCCCeeEEEEcCCC
Q 022298 227 GKDGPFDYMSVTPPY 241 (299)
Q Consensus 227 ~~~~~fDlI~iDPPY 241 (299)
...+..|+++.+.-.
T Consensus 75 ~~~g~iD~lv~nAg~ 89 (254)
T 1hdc_A 75 EEFGSVDGLVNNAGI 89 (254)
T ss_dssp HHHSCCCEEEECCCC
T ss_pred HHcCCCCEEEECCCC
Confidence 112478999987643
No 474
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=60.96 E-value=26 Score=26.39 Aligned_cols=52 Identities=17% Similarity=0.084 Sum_probs=37.6
Q ss_pred CEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCeeEEEEcC
Q 022298 179 SEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDYMSVTP 239 (299)
Q Consensus 179 ~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fDlI~iDP 239 (299)
.+|..||-++... +.++.-++..|+. + ....+..+.+.... ...+|+|++|-
T Consensus 5 ~~iLivdd~~~~~-~~l~~~L~~~g~~--v-~~~~~~~~al~~~~-----~~~~dlvl~D~ 56 (136)
T 3t6k_A 5 HTLLIVDDDDTVA-EMLELVLRGAGYE--V-RRAASGEEALQQIY-----KNLPDALICDV 56 (136)
T ss_dssp CEEEEECSCHHHH-HHHHHHHHHTTCE--E-EEESSHHHHHHHHH-----HSCCSEEEEES
T ss_pred CEEEEEeCCHHHH-HHHHHHHHHCCCE--E-EEeCCHHHHHHHHH-----hCCCCEEEEeC
Confidence 4689999999886 8888888877652 3 24456666665442 35799999995
No 475
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=60.83 E-value=30 Score=29.37 Aligned_cols=78 Identities=12% Similarity=0.000 Sum_probs=46.0
Q ss_pred CCEEEEECCccchHHHH----HHHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHH---HhhhcCC
Q 022298 156 PGRWLDLYSGTGSVGIE----AISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLER---AEQFVGK 228 (299)
Q Consensus 156 ~~~VLDLfaGSGalgIE----AlSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~---~~~~~~~ 228 (299)
++++|=-|+ +|.+|.+ ++.+|+ +|+.++.+...+ +.+.+.+ + .++.++.+|+.+...- .......
T Consensus 3 ~k~vlVTGa-s~GIG~a~a~~l~~~G~-~V~~~~r~~~~~-~~~~~~~---~--~~~~~~~~D~~~~~~v~~~~~~~~~~ 74 (235)
T 3l6e_A 3 LGHIIVTGA-GSGLGRALTIGLVERGH-QVSMMGRRYQRL-QQQELLL---G--NAVIGIVADLAHHEDVDVAFAAAVEW 74 (235)
T ss_dssp CCEEEEEST-TSHHHHHHHHHHHHTTC-EEEEEESCHHHH-HHHHHHH---G--GGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCEEEEECC-CCHHHHHHHHHHHHCCC-EEEEEECCHHHH-HHHHHHh---c--CCceEEECCCCCHHHHHHHHHHHHHh
Confidence 345665554 4555654 345787 699999998876 5554443 2 2477888887643211 0001111
Q ss_pred CCCeeEEEEcCCC
Q 022298 229 DGPFDYMSVTPPY 241 (299)
Q Consensus 229 ~~~fDlI~iDPPY 241 (299)
.+..|+++.+.-.
T Consensus 75 ~g~id~lvnnAg~ 87 (235)
T 3l6e_A 75 GGLPELVLHCAGT 87 (235)
T ss_dssp HCSCSEEEEECCC
T ss_pred cCCCcEEEECCCC
Confidence 2578999987654
No 476
>2rdm_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.76A {Sinorhizobium medicae}
Probab=60.70 E-value=37 Score=24.87 Aligned_cols=54 Identities=13% Similarity=0.155 Sum_probs=37.9
Q ss_pred CEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCC-CeeEEEEcCCC
Q 022298 179 SEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDG-PFDYMSVTPPY 241 (299)
Q Consensus 179 ~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~-~fDlI~iDPPY 241 (299)
.+|..||-++... +.++..++..|+. + ....+..+.+.... .. .+|+|++|--.
T Consensus 6 ~~ilivdd~~~~~-~~l~~~L~~~g~~--v-~~~~~~~~a~~~l~-----~~~~~dlvi~d~~l 60 (132)
T 2rdm_A 6 VTILLADDEAILL-LDFESTLTDAGFL--V-TAVSSGAKAIEMLK-----SGAAIDGVVTDIRF 60 (132)
T ss_dssp CEEEEECSSHHHH-HHHHHHHHHTTCE--E-EEESSHHHHHHHHH-----TTCCCCEEEEESCC
T ss_pred ceEEEEcCcHHHH-HHHHHHHHHcCCE--E-EEECCHHHHHHHHH-----cCCCCCEEEEeeeC
Confidence 3689999999886 8888888877652 3 23456666655442 23 79999999643
No 477
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=60.67 E-value=23 Score=31.05 Aligned_cols=83 Identities=14% Similarity=0.077 Sum_probs=49.4
Q ss_pred CCCCEEEEECCccchHHHH----HHHcCCCEEEEEeCCHH-------HHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHH
Q 022298 154 LRPGRWLDLYSGTGSVGIE----AISRGCSEVHFVEMDPW-------VVSNVLIPNLEWTGFLDVSSIHTVRVETFLERA 222 (299)
Q Consensus 154 ~~~~~VLDLfaGSGalgIE----AlSrGa~~V~~VD~n~~-------Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~ 222 (299)
+.++++|=-|+++ .+|.+ ++++|+ +|+.++.+.. .+ +.+.+.++..+ .++.++.+|+.+...-.
T Consensus 7 l~~k~vlVTGas~-GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~ 81 (285)
T 3sc4_A 7 LRGKTMFISGGSR-GIGLAIAKRVAADGA-NVALVAKSAEPHPKLPGTI-YTAAKEIEEAG--GQALPIVGDIRDGDAVA 81 (285)
T ss_dssp CTTCEEEEESCSS-HHHHHHHHHHHTTTC-EEEEEESCCSCCSSSCCCH-HHHHHHHHHHT--SEEEEEECCTTSHHHHH
T ss_pred CCCCEEEEECCCC-HHHHHHHHHHHHCCC-EEEEEECChhhhhhhhHHH-HHHHHHHHhcC--CcEEEEECCCCCHHHHH
Confidence 4577888776654 45554 345687 6999999875 33 44445555554 34778888876532110
Q ss_pred ---hhhcCCCCCeeEEEEcCCC
Q 022298 223 ---EQFVGKDGPFDYMSVTPPY 241 (299)
Q Consensus 223 ---~~~~~~~~~fDlI~iDPPY 241 (299)
.......++.|+++.+.-.
T Consensus 82 ~~~~~~~~~~g~id~lvnnAg~ 103 (285)
T 3sc4_A 82 AAVAKTVEQFGGIDICVNNASA 103 (285)
T ss_dssp HHHHHHHHHHSCCSEEEECCCC
T ss_pred HHHHHHHHHcCCCCEEEECCCC
Confidence 1011112478999987643
No 478
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=60.24 E-value=56 Score=27.23 Aligned_cols=83 Identities=12% Similarity=0.026 Sum_probs=50.3
Q ss_pred CCCCEEEEECCccchHHHHHH----HcCCCEEEEEeCCHHHHHHHHHHHHHH-hCCCCcEEEEEcchhhHHH--H-Hhhh
Q 022298 154 LRPGRWLDLYSGTGSVGIEAI----SRGCSEVHFVEMDPWVVSNVLIPNLEW-TGFLDVSSIHTVRVETFLE--R-AEQF 225 (299)
Q Consensus 154 ~~~~~VLDLfaGSGalgIEAl----SrGa~~V~~VD~n~~Al~~~a~~N~~~-~g~~~~~~vi~~D~~~~l~--~-~~~~ 225 (299)
+.+.++| +-.|+|.+|.+.+ .+|+ +|++++.++... +.+.+.++. .+ .++.++.+|+.+... . ....
T Consensus 5 ~~~~~vl-VtGasggiG~~la~~l~~~G~-~V~~~~r~~~~~-~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~ 79 (248)
T 2pnf_A 5 LQGKVSL-VTGSTRGIGRAIAEKLASAGS-TVIITGTSGERA-KAVAEEIANKYG--VKAHGVEMNLLSEESINKAFEEI 79 (248)
T ss_dssp CTTCEEE-ETTCSSHHHHHHHHHHHHTTC-EEEEEESSHHHH-HHHHHHHHHHHC--CCEEEEECCTTCHHHHHHHHHHH
T ss_pred cCCCEEE-EECCCchHHHHHHHHHHHCCC-EEEEEeCChHHH-HHHHHHHHhhcC--CceEEEEccCCCHHHHHHHHHHH
Confidence 4566666 4556777776643 4686 699999998876 555555543 33 247788888754321 1 1101
Q ss_pred cCCCCCeeEEEEcCCC
Q 022298 226 VGKDGPFDYMSVTPPY 241 (299)
Q Consensus 226 ~~~~~~fDlI~iDPPY 241 (299)
....+.+|+||.+.-+
T Consensus 80 ~~~~~~~d~vi~~Ag~ 95 (248)
T 2pnf_A 80 YNLVDGIDILVNNAGI 95 (248)
T ss_dssp HHHSSCCSEEEECCCC
T ss_pred HHhcCCCCEEEECCCC
Confidence 1112478999987644
No 479
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=59.89 E-value=29 Score=25.97 Aligned_cols=52 Identities=15% Similarity=0.067 Sum_probs=37.7
Q ss_pred CEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCeeEEEEcC
Q 022298 179 SEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDYMSVTP 239 (299)
Q Consensus 179 ~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fDlI~iDP 239 (299)
.+|..||-++... +.++.-++..|+. +. ...+..+.+.... ...+|+|++|-
T Consensus 5 ~~iLivdd~~~~~-~~l~~~L~~~g~~--v~-~~~~~~~a~~~l~-----~~~~dlvi~d~ 56 (142)
T 2qxy_A 5 PTVMVVDESRITF-LAVKNALEKDGFN--VI-WAKNEQEAFTFLR-----REKIDLVFVDV 56 (142)
T ss_dssp CEEEEECSCHHHH-HHHHHHHGGGTCE--EE-EESSHHHHHHHHT-----TSCCSEEEEEC
T ss_pred CeEEEEeCCHHHH-HHHHHHHHhCCCE--EE-EECCHHHHHHHHh-----ccCCCEEEEeC
Confidence 3689999999886 8888888777652 32 4566666665442 35799999997
No 480
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=59.81 E-value=23 Score=32.35 Aligned_cols=42 Identities=12% Similarity=-0.010 Sum_probs=31.0
Q ss_pred CCCEEEEECCccchHHHHHH----Hc-CCCEEEEEeCCHHHHHHHHHHHHHHhCC
Q 022298 155 RPGRWLDLYSGTGSVGIEAI----SR-GCSEVHFVEMDPWVVSNVLIPNLEWTGF 204 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAl----Sr-Ga~~V~~VD~n~~Al~~~a~~N~~~~g~ 204 (299)
.+.+||=.|+ |.+|+.++ .+ |+ +|+++|.+++.+ +.++ .+|.
T Consensus 186 ~g~~VlV~Ga--G~vG~~avqlak~~~Ga-~Vi~~~~~~~~~-~~~~----~lGa 232 (359)
T 1h2b_A 186 PGAYVAIVGV--GGLGHIAVQLLKVMTPA-TVIALDVKEEKL-KLAE----RLGA 232 (359)
T ss_dssp TTCEEEEECC--SHHHHHHHHHHHHHCCC-EEEEEESSHHHH-HHHH----HTTC
T ss_pred CCCEEEEECC--CHHHHHHHHHHHHcCCC-eEEEEeCCHHHH-HHHH----HhCC
Confidence 5789998887 46777654 35 87 699999998876 6664 3664
No 481
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=59.75 E-value=18 Score=32.80 Aligned_cols=41 Identities=12% Similarity=-0.001 Sum_probs=28.4
Q ss_pred CCCEEEEECC--ccchHHHHHH-HcCCCEEEEEeCCHHHHHHHHHH
Q 022298 155 RPGRWLDLYS--GTGSVGIEAI-SRGCSEVHFVEMDPWVVSNVLIP 197 (299)
Q Consensus 155 ~~~~VLDLfa--GSGalgIEAl-SrGa~~V~~VD~n~~Al~~~a~~ 197 (299)
.+.+||-.|| |.|...+.++ .+|+ +|+++|.+++.. +.+++
T Consensus 169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga-~V~~~~~~~~~~-~~~~~ 212 (347)
T 2hcy_A 169 AGHWVAISGAAGGLGSLAVQYAKAMGY-RVLGIDGGEGKE-ELFRS 212 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECSTTHH-HHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-cEEEEcCCHHHH-HHHHH
Confidence 5789999987 3444444443 3687 799999988775 65543
No 482
>3a10_A Response regulator; phosphoacceptor, signaling protein; HET: MSE PG4; 1.63A {Thermotoga maritima} PDB: 3a0r_B* 3a0u_A*
Probab=59.62 E-value=33 Score=24.56 Aligned_cols=51 Identities=18% Similarity=0.234 Sum_probs=36.2
Q ss_pred EEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCeeEEEEcC
Q 022298 180 EVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDYMSVTP 239 (299)
Q Consensus 180 ~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fDlI~iDP 239 (299)
+|..+|-++... +.++..++..|+. + ....+..+.+.... ...+|+|++|-
T Consensus 3 ~ilivdd~~~~~-~~l~~~l~~~~~~--v-~~~~~~~~a~~~~~-----~~~~dlvl~D~ 53 (116)
T 3a10_A 3 RILVVDDEPNIR-ELLKEELQEEGYE--I-DTAENGEEALKKFF-----SGNYDLVILDI 53 (116)
T ss_dssp EEEEECSCHHHH-HHHHHHHHHTTCE--E-EEESSHHHHHHHHH-----HSCCSEEEECS
T ss_pred EEEEEeCCHHHH-HHHHHHHHHCCCE--E-EEeCCHHHHHHHHh-----cCCCCEEEEEC
Confidence 588999999886 8888888877652 3 24456666655432 25699999995
No 483
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=59.55 E-value=43 Score=29.12 Aligned_cols=83 Identities=12% Similarity=-0.008 Sum_probs=49.8
Q ss_pred CCCCEEEEECCccchHHHHHH----HcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHH--H-hhhc
Q 022298 154 LRPGRWLDLYSGTGSVGIEAI----SRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLER--A-EQFV 226 (299)
Q Consensus 154 ~~~~~VLDLfaGSGalgIEAl----SrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~--~-~~~~ 226 (299)
+.+.++|=. .|+|.+|.+.+ .+|+ +|++++.++..+ +.+.+.++..+ .++.++.+|+.+...- . ....
T Consensus 42 l~~k~vlIT-GasggIG~~la~~L~~~G~-~V~~~~r~~~~~-~~~~~~l~~~~--~~~~~~~~Dl~d~~~v~~~~~~~~ 116 (285)
T 2c07_A 42 GENKVALVT-GAGRGIGREIAKMLAKSVS-HVICISRTQKSC-DSVVDEIKSFG--YESSGYAGDVSKKEEISEVINKIL 116 (285)
T ss_dssp CSSCEEEEE-STTSHHHHHHHHHHTTTSS-EEEEEESSHHHH-HHHHHHHHTTT--CCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEE-CCCcHHHHHHHHHHHHcCC-EEEEEcCCHHHH-HHHHHHHHhcC--CceeEEECCCCCHHHHHHHHHHHH
Confidence 345667755 45677776644 3576 688899888776 65655555443 3477888887643211 1 0011
Q ss_pred CCCCCeeEEEEcCCC
Q 022298 227 GKDGPFDYMSVTPPY 241 (299)
Q Consensus 227 ~~~~~fDlI~iDPPY 241 (299)
...+..|+||.+.-.
T Consensus 117 ~~~~~id~li~~Ag~ 131 (285)
T 2c07_A 117 TEHKNVDILVNNAGI 131 (285)
T ss_dssp HHCSCCCEEEECCCC
T ss_pred HhcCCCCEEEECCCC
Confidence 112478999987643
No 484
>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901}
Probab=59.51 E-value=38 Score=25.42 Aligned_cols=54 Identities=13% Similarity=0.086 Sum_probs=38.5
Q ss_pred CEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCeeEEEEcCC
Q 022298 179 SEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPP 240 (299)
Q Consensus 179 ~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fDlI~iDPP 240 (299)
.+|..||-++... +.++.-++..|+. + ....+..+.+.... ....+|+|++|--
T Consensus 6 ~~ilivdd~~~~~-~~l~~~L~~~g~~--v-~~~~~~~~a~~~l~----~~~~~dlvi~D~~ 59 (140)
T 3h5i_A 6 KKILIVEDSKFQA-KTIANILNKYGYT--V-EIALTGEAAVEKVS----GGWYPDLILMDIE 59 (140)
T ss_dssp CEEEEECSCHHHH-HHHHHHHHHTTCE--E-EEESSHHHHHHHHH----TTCCCSEEEEESS
T ss_pred cEEEEEeCCHHHH-HHHHHHHHHcCCE--E-EEecChHHHHHHHh----cCCCCCEEEEecc
Confidence 4799999999986 8888888887752 3 24556666665442 1257999999963
No 485
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=59.35 E-value=28 Score=29.80 Aligned_cols=80 Identities=19% Similarity=0.249 Sum_probs=46.6
Q ss_pred CCCCEEEEECCccchHHHHH----HHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHH--HH-hhhc
Q 022298 154 LRPGRWLDLYSGTGSVGIEA----ISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLE--RA-EQFV 226 (299)
Q Consensus 154 ~~~~~VLDLfaGSGalgIEA----lSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~--~~-~~~~ 226 (299)
+.++++|=. .|+|.+|.+. +.+|+ +|+.++.++..+ +.+.+.+ + .++.++.+|+.+... .. ....
T Consensus 4 l~~k~vlVT-Gas~giG~~ia~~l~~~G~-~V~~~~r~~~~~-~~~~~~~---~--~~~~~~~~D~~~~~~v~~~~~~~~ 75 (253)
T 1hxh_A 4 LQGKVALVT-GGASGVGLEVVKLLLGEGA-KVAFSDINEAAG-QQLAAEL---G--ERSMFVRHDVSSEADWTLVMAAVQ 75 (253)
T ss_dssp TTTCEEEET-TTTSHHHHHHHHHHHHTTC-EEEEECSCHHHH-HHHHHHH---C--TTEEEECCCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEe-CCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHH-HHHHHHc---C--CceEEEEccCCCHHHHHHHHHHHH
Confidence 456666644 4566677654 35687 599999998765 4443333 3 347778888764321 10 0011
Q ss_pred CCCCCeeEEEEcCCC
Q 022298 227 GKDGPFDYMSVTPPY 241 (299)
Q Consensus 227 ~~~~~fDlI~iDPPY 241 (299)
...++.|+++.+.-.
T Consensus 76 ~~~g~id~lv~~Ag~ 90 (253)
T 1hxh_A 76 RRLGTLNVLVNNAGI 90 (253)
T ss_dssp HHHCSCCEEEECCCC
T ss_pred HHcCCCCEEEECCCC
Confidence 112468999987643
No 486
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=59.30 E-value=46 Score=29.76 Aligned_cols=78 Identities=10% Similarity=-0.090 Sum_probs=43.8
Q ss_pred CCCCEEEEECCccc-hHHHHHH-HcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCC
Q 022298 154 LRPGRWLDLYSGTG-SVGIEAI-SRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGP 231 (299)
Q Consensus 154 ~~~~~VLDLfaGSG-algIEAl-SrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~ 231 (299)
..+.+||=.|||++ .+++..+ ..|+.+|+++|.+++.+ +.++ .+|....+.....|..+.+... . ....
T Consensus 162 ~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~-~~~~----~~Ga~~~i~~~~~~~~~~v~~~---t-~g~g 232 (348)
T 4eez_A 162 KPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKL-NLAK----KIGADVTINSGDVNPVDEIKKI---T-GGLG 232 (348)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHH-HHHH----HTTCSEEEEC-CCCHHHHHHHH---T-TSSC
T ss_pred CCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHh-hhhh----hcCCeEEEeCCCCCHHHHhhhh---c-CCCC
Confidence 35788988887653 2333333 35667899999999875 5554 3565321222223433333322 1 2346
Q ss_pred eeEEEEcCC
Q 022298 232 FDYMSVTPP 240 (299)
Q Consensus 232 fDlI~iDPP 240 (299)
+|.++.+-.
T Consensus 233 ~d~~~~~~~ 241 (348)
T 4eez_A 233 VQSAIVCAV 241 (348)
T ss_dssp EEEEEECCS
T ss_pred ceEEEEecc
Confidence 788887653
No 487
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=59.07 E-value=61 Score=28.16 Aligned_cols=84 Identities=10% Similarity=-0.006 Sum_probs=50.5
Q ss_pred CCCCEEEEECCccchHHHHH----HHcCCCEEEEEeCCHHHHHHHHHHHHHHhC---CCCcEEEEEcchhhHHH--HH-h
Q 022298 154 LRPGRWLDLYSGTGSVGIEA----ISRGCSEVHFVEMDPWVVSNVLIPNLEWTG---FLDVSSIHTVRVETFLE--RA-E 223 (299)
Q Consensus 154 ~~~~~VLDLfaGSGalgIEA----lSrGa~~V~~VD~n~~Al~~~a~~N~~~~g---~~~~~~vi~~D~~~~l~--~~-~ 223 (299)
+.+.++|=.| |+|.+|.+. +.+|+ +|+.++.+...+ +.+.+.++... ...++.++.+|+.+... .. .
T Consensus 16 l~~k~vlVTG-asggIG~~la~~l~~~G~-~V~~~~r~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~ 92 (303)
T 1yxm_A 16 LQGQVAIVTG-GATGIGKAIVKELLELGS-NVVIASRKLERL-KSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVK 92 (303)
T ss_dssp TTTCEEEEET-TTSHHHHHHHHHHHHTTC-EEEEEESCHHHH-HHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHH
T ss_pred CCCCEEEEEC-CCcHHHHHHHHHHHHCCC-EEEEEeCCHHHH-HHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHH
Confidence 4567787665 466677654 35687 699999998876 66666555411 12357888898764321 11 1
Q ss_pred hhcCCCCCeeEEEEcCC
Q 022298 224 QFVGKDGPFDYMSVTPP 240 (299)
Q Consensus 224 ~~~~~~~~fDlI~iDPP 240 (299)
......+++|+||.+.-
T Consensus 93 ~~~~~~g~id~li~~Ag 109 (303)
T 1yxm_A 93 STLDTFGKINFLVNNGG 109 (303)
T ss_dssp HHHHHHSCCCEEEECCC
T ss_pred HHHHHcCCCCEEEECCC
Confidence 00011146899998764
No 488
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=59.07 E-value=30 Score=31.76 Aligned_cols=68 Identities=15% Similarity=0.041 Sum_probs=41.5
Q ss_pred CCCEEEEECCccchHHHHHH----HcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCC
Q 022298 155 RPGRWLDLYSGTGSVGIEAI----SRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDG 230 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAl----SrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~ 230 (299)
.+.+||-.||| .+|+.++ .+|+ +|+++|.+++.+ +.+++ +|.. .++..+-.++.... ..
T Consensus 194 ~g~~VlV~GaG--~vG~~aiqlak~~Ga-~Vi~~~~~~~~~-~~a~~----lGa~---~vi~~~~~~~~~~~------~~ 256 (369)
T 1uuf_A 194 PGKKVGVVGIG--GLGHMGIKLAHAMGA-HVVAFTTSEAKR-EAAKA----LGAD---EVVNSRNADEMAAH------LK 256 (369)
T ss_dssp TTCEEEEECCS--HHHHHHHHHHHHTTC-EEEEEESSGGGH-HHHHH----HTCS---EEEETTCHHHHHTT------TT
T ss_pred CCCEEEEECCC--HHHHHHHHHHHHCCC-EEEEEeCCHHHH-HHHHH----cCCc---EEeccccHHHHHHh------hc
Confidence 57899998764 4665543 3688 499999998886 66653 5643 23333222333221 25
Q ss_pred CeeEEEEcC
Q 022298 231 PFDYMSVTP 239 (299)
Q Consensus 231 ~fDlI~iDP 239 (299)
.+|+||-.-
T Consensus 257 g~Dvvid~~ 265 (369)
T 1uuf_A 257 SFDFILNTV 265 (369)
T ss_dssp CEEEEEECC
T ss_pred CCCEEEECC
Confidence 799987543
No 489
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=58.99 E-value=46 Score=28.16 Aligned_cols=80 Identities=13% Similarity=0.096 Sum_probs=47.4
Q ss_pred CCCCEEEEECCccchHHHHH----HHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHH--HH-hhhc
Q 022298 154 LRPGRWLDLYSGTGSVGIEA----ISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLE--RA-EQFV 226 (299)
Q Consensus 154 ~~~~~VLDLfaGSGalgIEA----lSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~--~~-~~~~ 226 (299)
+.+.++|=.|+ +|.+|.+. +.+|+ +|++++.+.... +.+.+.+ + .++.++.+|+.+... .. ....
T Consensus 10 ~~~k~vlVTGa-sggiG~~~a~~l~~~G~-~V~~~~r~~~~~-~~~~~~~---~--~~~~~~~~D~~~~~~v~~~~~~~~ 81 (265)
T 2o23_A 10 VKGLVAVITGG-ASGLGLATAERLVGQGA-SAVLLDLPNSGG-EAQAKKL---G--NNCVFAPADVTSEKDVQTALALAK 81 (265)
T ss_dssp CTTCEEEEETT-TSHHHHHHHHHHHHTTC-EEEEEECTTSSH-HHHHHHH---C--TTEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEECC-CChHHHHHHHHHHHCCC-EEEEEeCCcHhH-HHHHHHh---C--CceEEEEcCCCCHHHHHHHHHHHH
Confidence 45677776655 56677654 35687 699999988765 4443332 3 347788888764321 11 1011
Q ss_pred CCCCCeeEEEEcCCC
Q 022298 227 GKDGPFDYMSVTPPY 241 (299)
Q Consensus 227 ~~~~~fDlI~iDPPY 241 (299)
...+..|++|.+.-.
T Consensus 82 ~~~g~id~li~~Ag~ 96 (265)
T 2o23_A 82 GKFGRVDVAVNCAGI 96 (265)
T ss_dssp HHHSCCCEEEECCCC
T ss_pred HHCCCCCEEEECCcc
Confidence 112478999987643
No 490
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=58.88 E-value=16 Score=29.90 Aligned_cols=39 Identities=23% Similarity=0.139 Sum_probs=26.2
Q ss_pred CCCEEEEECCccchHHHHH---H-HcCCCEEEEEeCCHHHHHHHHH
Q 022298 155 RPGRWLDLYSGTGSVGIEA---I-SRGCSEVHFVEMDPWVVSNVLI 196 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEA---l-SrGa~~V~~VD~n~~Al~~~a~ 196 (299)
.+.+||..|| +|.+|..+ + .+|+ +|+++|.+++.. +.++
T Consensus 38 ~g~~vlV~Ga-~ggiG~~~~~~~~~~G~-~V~~~~~~~~~~-~~~~ 80 (198)
T 1pqw_A 38 PGERVLIHSA-TGGVGMAAVSIAKMIGA-RIYTTAGSDAKR-EMLS 80 (198)
T ss_dssp TTCEEEETTT-TSHHHHHHHHHHHHHTC-EEEEEESSHHHH-HHHH
T ss_pred CCCEEEEeeC-CChHHHHHHHHHHHcCC-EEEEEeCCHHHH-HHHH
Confidence 5788888774 34444433 3 3687 699999998875 5553
No 491
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=58.81 E-value=26 Score=30.74 Aligned_cols=33 Identities=15% Similarity=0.165 Sum_probs=24.0
Q ss_pred CCCEEEEECCc-cchHHHHHHH-cCCCEEEEEeCC
Q 022298 155 RPGRWLDLYSG-TGSVGIEAIS-RGCSEVHFVEMD 187 (299)
Q Consensus 155 ~~~~VLDLfaG-SGalgIEAlS-rGa~~V~~VD~n 187 (299)
.+.+|+=+||| .|+-.++.|. .|..+++.+|.+
T Consensus 27 ~~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d 61 (251)
T 1zud_1 27 LDSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDD 61 (251)
T ss_dssp HTCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCC
T ss_pred hcCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 46789988886 4655555444 588899999876
No 492
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=58.77 E-value=68 Score=28.56 Aligned_cols=83 Identities=11% Similarity=-0.024 Sum_probs=52.1
Q ss_pred CCEEEEECCccchHHHHHHHc-------C-CCEEEEEe-----CCH----------------------HHHHHH--HHHH
Q 022298 156 PGRWLDLYSGTGSVGIEAISR-------G-CSEVHFVE-----MDP----------------------WVVSNV--LIPN 198 (299)
Q Consensus 156 ~~~VLDLfaGSGalgIEAlSr-------G-a~~V~~VD-----~n~----------------------~Al~~~--a~~N 198 (299)
.+.|+++|+.-|.-.+.++.. + ..+|+++| -.+ +.+.+. ..+|
T Consensus 70 pG~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~~~ 149 (257)
T 3tos_A 70 PGVIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAHEC 149 (257)
T ss_dssp CSEEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHHHT
T ss_pred CCeEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHHhh
Confidence 468999999999876654331 2 36799999 221 011011 1233
Q ss_pred HHHhCC-CCcEEEEEcchhhHHHHHhhhcCCCCCeeEEEEcC
Q 022298 199 LEWTGF-LDVSSIHTVRVETFLERAEQFVGKDGPFDYMSVTP 239 (299)
Q Consensus 199 ~~~~g~-~~~~~vi~~D~~~~l~~~~~~~~~~~~fDlI~iDP 239 (299)
.+.++. .++++++.|++.+-+..... .....+||+|++|-
T Consensus 150 ~~~~g~~~~~i~li~G~~~dTL~~~l~-~~~~~~~dlv~ID~ 190 (257)
T 3tos_A 150 SDFFGHVTQRSVLVEGDVRETVPRYLA-ENPQTVIALAYFDL 190 (257)
T ss_dssp TSTTTTSCCSEEEEESCHHHHHHHHHH-HCTTCCEEEEEECC
T ss_pred hhhcCCCCCcEEEEEecHHHHHHHHHH-hCCCCceEEEEEcC
Confidence 334565 37799999999888765310 11235799999998
No 493
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=58.39 E-value=32 Score=28.91 Aligned_cols=82 Identities=17% Similarity=0.239 Sum_probs=49.4
Q ss_pred CCCEEEEECCccchHHHHHH----HcCCCEEEEEeCC-HHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHH---hhhc
Q 022298 155 RPGRWLDLYSGTGSVGIEAI----SRGCSEVHFVEMD-PWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERA---EQFV 226 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEAl----SrGa~~V~~VD~n-~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~---~~~~ 226 (299)
.+.++| +-.|+|.+|.+.+ .+|+ +|++++.+ +..+ +.+.+.++..+ .++.++.+|+.+...-. ....
T Consensus 6 ~~k~vl-VTGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~-~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~ 80 (258)
T 3afn_B 6 KGKRVL-ITGSSQGIGLATARLFARAGA-KVGLHGRKAPANI-DETIASMRADG--GDAAFFAADLATSEACQQLVDEFV 80 (258)
T ss_dssp TTCEEE-ETTCSSHHHHHHHHHHHHTTC-EEEEEESSCCTTH-HHHHHHHHHTT--CEEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCEEE-EeCCCChHHHHHHHHHHHCCC-EEEEECCCchhhH-HHHHHHHHhcC--CceEEEECCCCCHHHHHHHHHHHH
Confidence 466777 5556777776643 5687 69999998 6655 55555555443 35778888876542111 0000
Q ss_pred CCCCCeeEEEEcCCC
Q 022298 227 GKDGPFDYMSVTPPY 241 (299)
Q Consensus 227 ~~~~~fDlI~iDPPY 241 (299)
...+.+|+||.+.-.
T Consensus 81 ~~~g~id~vi~~Ag~ 95 (258)
T 3afn_B 81 AKFGGIDVLINNAGG 95 (258)
T ss_dssp HHHSSCSEEEECCCC
T ss_pred HHcCCCCEEEECCCC
Confidence 111478999987643
No 494
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=58.33 E-value=44 Score=28.76 Aligned_cols=81 Identities=11% Similarity=0.037 Sum_probs=48.5
Q ss_pred CCCEEEEECCccchHHHHH----HHcCCCEEEEEeC-CHHHHHHHHHHHHHHh-CCCCcEEEEEcchhhH----H--HHH
Q 022298 155 RPGRWLDLYSGTGSVGIEA----ISRGCSEVHFVEM-DPWVVSNVLIPNLEWT-GFLDVSSIHTVRVETF----L--ERA 222 (299)
Q Consensus 155 ~~~~VLDLfaGSGalgIEA----lSrGa~~V~~VD~-n~~Al~~~a~~N~~~~-g~~~~~~vi~~D~~~~----l--~~~ 222 (299)
.+.++| +-.|+|.+|.+. +.+|+ +|+.++. ++..+ +.+.+.++.. + .++.++.+|+.+. . ...
T Consensus 10 ~~k~~l-VTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~-~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~ 84 (276)
T 1mxh_A 10 ECPAAV-ITGGARRIGHSIAVRLHQQGF-RVVVHYRHSEGAA-QRLVAELNAARA--GSAVLCKGDLSLSSSLLDCCEDI 84 (276)
T ss_dssp -CCEEE-ETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHH-HHHHHHHHHHST--TCEEEEECCCSSSTTHHHHHHHH
T ss_pred CCCEEE-EeCCCcHHHHHHHHHHHHCCC-EEEEEeCCChHHH-HHHHHHHHHhcC--CceEEEeccCCCccccHHHHHHH
Confidence 355666 555667777664 35687 6999999 88776 5555555443 3 2477888887644 1 111
Q ss_pred -hhhcCCCCCeeEEEEcCC
Q 022298 223 -EQFVGKDGPFDYMSVTPP 240 (299)
Q Consensus 223 -~~~~~~~~~fDlI~iDPP 240 (299)
.......+..|++|.+.-
T Consensus 85 ~~~~~~~~g~id~lv~nAg 103 (276)
T 1mxh_A 85 IDCSFRAFGRCDVLVNNAS 103 (276)
T ss_dssp HHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHhcCCCCEEEECCC
Confidence 101111246899998764
No 495
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=58.31 E-value=79 Score=26.24 Aligned_cols=80 Identities=11% Similarity=0.009 Sum_probs=48.7
Q ss_pred CCEEEEECCccchHHHHH----HHcCCCEEEEEeCCHHHHHHHHHHHHH-HhCCCCcEEEEEcchhhHHHHHhhhcC---
Q 022298 156 PGRWLDLYSGTGSVGIEA----ISRGCSEVHFVEMDPWVVSNVLIPNLE-WTGFLDVSSIHTVRVETFLERAEQFVG--- 227 (299)
Q Consensus 156 ~~~VLDLfaGSGalgIEA----lSrGa~~V~~VD~n~~Al~~~a~~N~~-~~g~~~~~~vi~~D~~~~l~~~~~~~~--- 227 (299)
++++|=-| |+|.+|.+. +.+|+ +|+.++.+.+.+ +.+.+.+. ..+ .++.++.+|+.+...-. .+..
T Consensus 2 ~k~vlITG-as~gIG~~ia~~l~~~G~-~V~~~~r~~~~~-~~~~~~~~~~~~--~~~~~~~~D~~~~~~v~-~~~~~~~ 75 (235)
T 3l77_A 2 MKVAVITG-ASRGIGEAIARALARDGY-ALALGARSVDRL-EKIAHELMQEQG--VEVFYHHLDVSKAESVE-EFSKKVL 75 (235)
T ss_dssp CCEEEEES-CSSHHHHHHHHHHHHTTC-EEEEEESCHHHH-HHHHHHHHHHHC--CCEEEEECCTTCHHHHH-HHCC-HH
T ss_pred CCEEEEEC-CCcHHHHHHHHHHHHCCC-EEEEEeCCHHHH-HHHHHHHHhhcC--CeEEEEEeccCCHHHHH-HHHHHHH
Confidence 34555555 456666553 45787 599999998876 65555554 344 34788889986543211 1110
Q ss_pred -CCCCeeEEEEcCCC
Q 022298 228 -KDGPFDYMSVTPPY 241 (299)
Q Consensus 228 -~~~~fDlI~iDPPY 241 (299)
..++.|+++.+.-.
T Consensus 76 ~~~g~id~li~~Ag~ 90 (235)
T 3l77_A 76 ERFGDVDVVVANAGL 90 (235)
T ss_dssp HHHSSCSEEEECCCC
T ss_pred HhcCCCCEEEECCcc
Confidence 11478999988644
No 496
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=58.29 E-value=22 Score=31.83 Aligned_cols=39 Identities=21% Similarity=0.078 Sum_probs=27.0
Q ss_pred CCCEEEEECC--ccchHHHHHH-HcCCCEEEEEeCCHHHHHHHH
Q 022298 155 RPGRWLDLYS--GTGSVGIEAI-SRGCSEVHFVEMDPWVVSNVL 195 (299)
Q Consensus 155 ~~~~VLDLfa--GSGalgIEAl-SrGa~~V~~VD~n~~Al~~~a 195 (299)
.+.+||-.|| |.|...+.++ .+|+ +|+++|.+++.+ +.+
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~-~V~~~~~~~~~~-~~~ 186 (333)
T 1v3u_A 145 GGETVLVSAAAGAVGSVVGQIAKLKGC-KVVGAAGSDEKI-AYL 186 (333)
T ss_dssp SSCEEEEESTTBHHHHHHHHHHHHTTC-EEEEEESSHHHH-HHH
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHH-HHH
Confidence 5788999886 3343333333 4688 799999998876 655
No 497
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=58.28 E-value=21 Score=31.23 Aligned_cols=82 Identities=13% Similarity=0.110 Sum_probs=51.2
Q ss_pred CCCCEEEEECCccchHHHHH----HHcCCCEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHH--HH-hhhc
Q 022298 154 LRPGRWLDLYSGTGSVGIEA----ISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLE--RA-EQFV 226 (299)
Q Consensus 154 ~~~~~VLDLfaGSGalgIEA----lSrGa~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~--~~-~~~~ 226 (299)
+.++++|=-| |+|.+|.+. +.+|+ +|+.++.++... +.+.+.++..+ .++.++.+|+.+... .. ....
T Consensus 31 l~gk~~lVTG-as~GIG~aia~~la~~G~-~V~~~~r~~~~~-~~~~~~~~~~~--~~~~~~~~Dv~~~~~~~~~~~~~~ 105 (275)
T 4imr_A 31 LRGRTALVTG-SSRGIGAAIAEGLAGAGA-HVILHGVKPGST-AAVQQRIIASG--GTAQELAGDLSEAGAGTDLIERAE 105 (275)
T ss_dssp CTTCEEEETT-CSSHHHHHHHHHHHHTTC-EEEEEESSTTTT-HHHHHHHHHTT--CCEEEEECCTTSTTHHHHHHHHHH
T ss_pred CCCCEEEEEC-CCCHHHHHHHHHHHHCCC-EEEEEcCCHHHH-HHHHHHHHhcC--CeEEEEEecCCCHHHHHHHHHHHH
Confidence 4567777555 455666553 45787 699999998876 66666666554 347788888754321 11 0011
Q ss_pred CCCCCeeEEEEcCCC
Q 022298 227 GKDGPFDYMSVTPPY 241 (299)
Q Consensus 227 ~~~~~fDlI~iDPPY 241 (299)
.. ++.|+++.+.-.
T Consensus 106 ~~-g~iD~lvnnAg~ 119 (275)
T 4imr_A 106 AI-APVDILVINASA 119 (275)
T ss_dssp HH-SCCCEEEECCCC
T ss_pred Hh-CCCCEEEECCCC
Confidence 11 578999987643
No 498
>3c3m_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.70A {Methanoculleus marisnigri JR1}
Probab=58.25 E-value=31 Score=25.88 Aligned_cols=52 Identities=25% Similarity=0.357 Sum_probs=36.7
Q ss_pred CEEEEEeCCHHHHHHHHHHHHHHhCCCCcEEEEEcchhhHHHHHhhhcCCCCCeeEEEEcC
Q 022298 179 SEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDYMSVTP 239 (299)
Q Consensus 179 ~~V~~VD~n~~Al~~~a~~N~~~~g~~~~~~vi~~D~~~~l~~~~~~~~~~~~fDlI~iDP 239 (299)
.+|..||-++... +.++.-++..|+. + ....+..+.+.... ...+|+|++|-
T Consensus 4 ~~ILivdd~~~~~-~~l~~~L~~~g~~--v-~~~~~~~~al~~l~-----~~~~dlvi~D~ 55 (138)
T 3c3m_A 4 YTILVVDDSPMIV-DVFVTMLERGGYR--P-ITAFSGEECLEALN-----ATPPDLVLLDI 55 (138)
T ss_dssp CEEEEECSCHHHH-HHHHHHHHHTTCE--E-EEESSHHHHHHHHH-----HSCCSEEEEES
T ss_pred ceEEEEeCCHHHH-HHHHHHHHHcCce--E-EEeCCHHHHHHHHh-----ccCCCEEEEeC
Confidence 3689999999886 8888888876652 2 24456666654432 24689999995
No 499
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=58.05 E-value=38 Score=29.28 Aligned_cols=83 Identities=13% Similarity=0.033 Sum_probs=50.5
Q ss_pred CCCCEEEEECCccchHHHH----HHHcCCCEEEEEeCCHHHHHHHHHHHHHH-hCCCCcEEEEEcchhhHHH--HH-hhh
Q 022298 154 LRPGRWLDLYSGTGSVGIE----AISRGCSEVHFVEMDPWVVSNVLIPNLEW-TGFLDVSSIHTVRVETFLE--RA-EQF 225 (299)
Q Consensus 154 ~~~~~VLDLfaGSGalgIE----AlSrGa~~V~~VD~n~~Al~~~a~~N~~~-~g~~~~~~vi~~D~~~~l~--~~-~~~ 225 (299)
+.++++|=-|+ +|.+|.+ ++.+|+ +|+.++.+...+ +.+.+.+.. .+ .++.++.+|+.+... .. ...
T Consensus 18 l~~k~vlVTGa-s~gIG~aia~~l~~~G~-~V~~~~r~~~~~-~~~~~~l~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~ 92 (266)
T 4egf_A 18 LDGKRALITGA-TKGIGADIARAFAAAGA-RLVLSGRDVSEL-DAARRALGEQFG--TDVHTVAIDLAEPDAPAELARRA 92 (266)
T ss_dssp CTTCEEEETTT-TSHHHHHHHHHHHHTTC-EEEEEESCHHHH-HHHHHHHHHHHC--CCEEEEECCTTSTTHHHHHHHHH
T ss_pred CCCCEEEEeCC-CcHHHHHHHHHHHHCCC-EEEEEeCCHHHH-HHHHHHHHHhcC--CcEEEEEecCCCHHHHHHHHHHH
Confidence 45677775554 5556654 345787 599999999876 666555544 34 347888888764321 10 001
Q ss_pred cCCCCCeeEEEEcCCC
Q 022298 226 VGKDGPFDYMSVTPPY 241 (299)
Q Consensus 226 ~~~~~~fDlI~iDPPY 241 (299)
....++.|+++.+.-.
T Consensus 93 ~~~~g~id~lv~nAg~ 108 (266)
T 4egf_A 93 AEAFGGLDVLVNNAGI 108 (266)
T ss_dssp HHHHTSCSEEEEECCC
T ss_pred HHHcCCCCEEEECCCc
Confidence 1112578999987644
No 500
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=58.05 E-value=60 Score=29.64 Aligned_cols=79 Identities=10% Similarity=0.077 Sum_probs=44.6
Q ss_pred CCCCEEEEECCccch---HHHHHHHcCCCEEEEEeCC---HHHHHHHHHHHHHH-hCCCCcEEEEEcc-hhhHHHHHhhh
Q 022298 154 LRPGRWLDLYSGTGS---VGIEAISRGCSEVHFVEMD---PWVVSNVLIPNLEW-TGFLDVSSIHTVR-VETFLERAEQF 225 (299)
Q Consensus 154 ~~~~~VLDLfaGSGa---lgIEAlSrGa~~V~~VD~n---~~Al~~~a~~N~~~-~g~~~~~~vi~~D-~~~~l~~~~~~ 225 (299)
+.++++|=+|+| |+ +...++..|+.+|+.++.+ .+.+ +.+.+.+.. .+. .+.++..+ ..++....
T Consensus 152 l~gk~~lVlGaG-G~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a-~~la~~~~~~~~~--~~~~~~~~~~~~l~~~l--- 224 (315)
T 3tnl_A 152 IIGKKMTICGAG-GAATAICIQAALDGVKEISIFNRKDDFYANA-EKTVEKINSKTDC--KAQLFDIEDHEQLRKEI--- 224 (315)
T ss_dssp CTTSEEEEECCS-HHHHHHHHHHHHTTCSEEEEEECSSTTHHHH-HHHHHHHHHHSSC--EEEEEETTCHHHHHHHH---
T ss_pred ccCCEEEEECCC-hHHHHHHHHHHHCCCCEEEEEECCCchHHHH-HHHHHHhhhhcCC--ceEEeccchHHHHHhhh---
Confidence 578899999886 42 2223345799889999999 6555 444444433 221 23333322 22221111
Q ss_pred cCCCCCeeEEEEcCCCCC
Q 022298 226 VGKDGPFDYMSVTPPYTA 243 (299)
Q Consensus 226 ~~~~~~fDlI~iDPPY~~ 243 (299)
..+|+|+.-=|-..
T Consensus 225 ----~~aDiIINaTp~Gm 238 (315)
T 3tnl_A 225 ----AESVIFTNATGVGM 238 (315)
T ss_dssp ----HTCSEEEECSSTTS
T ss_pred ----cCCCEEEECccCCC
Confidence 36899997666543
Done!