Query 022300
Match_columns 299
No_of_seqs 125 out of 1536
Neff 8.5
Searched_HMMs 29240
Date Mon Mar 25 03:14:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022300.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022300hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3erp_A Putative oxidoreductase 100.0 1.8E-50 6.1E-55 372.5 26.4 253 17-281 73-350 (353)
2 3n6q_A YGHZ aldo-keto reductas 100.0 2.5E-50 8.7E-55 370.7 25.9 264 17-290 52-341 (346)
3 1pyf_A IOLS protein; beta-alph 100.0 7.4E-51 2.5E-55 369.3 21.8 250 17-281 44-310 (312)
4 3eau_A Voltage-gated potassium 100.0 2.1E-50 7.1E-55 368.6 24.3 256 17-282 42-323 (327)
5 1gve_A Aflatoxin B1 aldehyde r 100.0 7E-50 2.4E-54 365.1 25.9 261 17-284 31-319 (327)
6 3n2t_A Putative oxidoreductase 100.0 4.4E-50 1.5E-54 369.2 23.8 252 17-284 61-333 (348)
7 3lut_A Voltage-gated potassium 100.0 5.6E-50 1.9E-54 371.1 23.8 258 17-284 76-359 (367)
8 1pz1_A GSP69, general stress p 100.0 6E-50 2E-54 366.3 22.5 254 17-283 43-313 (333)
9 1lqa_A TAS protein; TIM barrel 100.0 2.3E-49 8E-54 364.3 26.6 257 17-286 39-344 (346)
10 3v0s_A Perakine reductase; AKR 100.0 1.7E-50 5.8E-55 370.5 16.9 251 17-283 43-312 (337)
11 2bp1_A Aflatoxin B1 aldehyde r 100.0 4.6E-49 1.6E-53 363.9 24.9 260 18-284 65-352 (360)
12 1ur3_M Hypothetical oxidoreduc 100.0 1E-48 3.5E-53 355.9 23.1 231 18-284 63-317 (319)
13 1ynp_A Oxidoreductase, AKR11C1 100.0 1.4E-48 4.9E-53 354.7 21.5 236 18-283 58-310 (317)
14 3up8_A Putative 2,5-diketo-D-g 100.0 3.2E-48 1.1E-52 348.9 20.8 221 17-285 56-285 (298)
15 4f40_A Prostaglandin F2-alpha 100.0 1.9E-47 6.6E-52 342.9 19.9 217 17-281 44-275 (288)
16 3f7j_A YVGN protein; aldo-keto 100.0 2.5E-47 8.7E-52 340.1 20.0 216 17-282 40-264 (276)
17 1hw6_A 2,5-diketo-D-gluconic a 100.0 2.5E-47 8.6E-52 340.5 19.9 219 18-282 37-264 (278)
18 3o0k_A Aldo/keto reductase; ss 100.0 1.5E-47 5.1E-52 342.5 18.1 215 17-279 59-282 (283)
19 3b3e_A YVGN protein; aldo-keto 100.0 4.9E-47 1.7E-51 343.0 21.5 217 17-283 74-299 (310)
20 2wzm_A Aldo-keto reductase; ox 100.0 3.2E-47 1.1E-51 340.4 19.9 218 18-283 45-271 (283)
21 1vbj_A Prostaglandin F synthas 100.0 5.7E-47 2E-51 338.5 20.7 216 18-283 44-268 (281)
22 3o3r_A Aldo-keto reductase fam 100.0 1.3E-46 4.3E-51 342.0 21.5 229 17-284 35-297 (316)
23 3ln3_A Dihydrodiol dehydrogena 100.0 2.6E-46 8.8E-51 341.1 23.3 231 17-284 42-305 (324)
24 1qwk_A Aldose reductase, aldo- 100.0 8.1E-47 2.8E-51 343.3 19.5 238 17-284 38-297 (317)
25 3buv_A 3-OXO-5-beta-steroid 4- 100.0 3.1E-46 1.1E-50 340.7 21.6 230 17-283 44-306 (326)
26 1us0_A Aldose reductase; oxido 100.0 3.6E-46 1.2E-50 339.0 21.7 229 17-283 35-296 (316)
27 1vp5_A 2,5-diketo-D-gluconic a 100.0 2.8E-46 9.5E-51 336.3 20.4 217 17-282 48-277 (298)
28 4gie_A Prostaglandin F synthas 100.0 3E-46 1E-50 335.5 20.4 219 17-282 47-274 (290)
29 1afs_A 3-alpha-HSD, 3-alpha-hy 100.0 2.7E-46 9.4E-51 340.7 20.4 230 17-283 41-303 (323)
30 1mzr_A 2,5-diketo-D-gluconate 100.0 2.3E-46 7.7E-51 336.6 19.4 217 18-283 59-285 (296)
31 1s1p_A Aldo-keto reductase fam 100.0 6.8E-46 2.3E-50 339.1 22.3 230 17-283 41-303 (331)
32 3h7r_A Aldo-keto reductase; st 100.0 2.3E-46 7.9E-51 341.9 18.5 240 18-298 55-321 (331)
33 1mi3_A Xylose reductase, XR; a 100.0 7.6E-46 2.6E-50 337.7 21.0 232 17-282 38-306 (322)
34 3h7u_A Aldo-keto reductase; st 100.0 7.7E-46 2.6E-50 339.1 20.5 226 17-283 58-309 (335)
35 1zgd_A Chalcone reductase; pol 100.0 5.3E-46 1.8E-50 337.3 18.9 223 17-282 44-295 (312)
36 3krb_A Aldose reductase; ssgci 100.0 1E-45 3.5E-50 338.2 20.2 230 17-283 47-317 (334)
37 2bgs_A Aldose reductase; holoe 100.0 2.1E-45 7.2E-50 336.9 20.3 220 18-283 70-316 (344)
38 4gac_A Alcohol dehydrogenase [ 100.0 2.1E-45 7.1E-50 335.1 19.2 229 17-284 35-296 (324)
39 3b3d_A YTBE protein, putative 100.0 5.9E-45 2E-49 330.4 19.6 215 17-281 74-301 (314)
40 4exb_A Putative uncharacterize 100.0 7.7E-45 2.7E-49 326.4 14.1 199 17-271 79-292 (292)
41 3cf4_A Acetyl-COA decarboxylas 98.3 4E-07 1.4E-11 91.2 3.7 132 65-257 231-384 (807)
42 1ydn_A Hydroxymethylglutaryl-C 77.7 8.6 0.0003 33.3 8.3 108 55-165 22-141 (295)
43 4djd_D C/Fe-SP, corrinoid/iron 72.6 15 0.00051 32.5 8.4 99 61-165 82-188 (323)
44 1wv2_A Thiazole moeity, thiazo 71.9 46 0.0016 28.4 13.4 75 53-128 81-156 (265)
45 2ftp_A Hydroxymethylglutaryl-C 68.0 59 0.002 28.0 11.9 106 55-163 26-143 (302)
46 1f6y_A 5-methyltetrahydrofolat 60.2 78 0.0027 26.8 11.8 100 57-165 23-124 (262)
47 3k13_A 5-methyltetrahydrofolat 59.4 56 0.0019 28.4 9.4 105 57-169 35-145 (300)
48 2yci_X 5-methyltetrahydrofolat 57.6 89 0.003 26.6 12.9 102 57-169 32-137 (271)
49 1eye_A DHPS 1, dihydropteroate 57.5 91 0.0031 26.7 10.7 100 56-164 26-131 (280)
50 1wa3_A 2-keto-3-deoxy-6-phosph 52.7 40 0.0014 26.9 7.1 88 57-162 20-109 (205)
51 3qtp_A Enolase 1; glycolysis, 48.9 1.6E+02 0.0055 27.0 13.7 96 56-162 279-378 (441)
52 3gd6_A Muconate cycloisomerase 48.5 77 0.0026 28.4 8.9 104 55-169 197-301 (391)
53 2nql_A AGR_PAT_674P, isomerase 48.1 33 0.0011 30.8 6.3 114 41-169 207-321 (388)
54 1kko_A 3-methylaspartate ammon 47.3 1.6E+02 0.0055 26.5 12.5 107 55-166 248-361 (413)
55 1nvm_A HOA, 4-hydroxy-2-oxoval 46.5 54 0.0018 28.9 7.4 106 54-163 25-139 (345)
56 1ydo_A HMG-COA lyase; TIM-barr 46.2 59 0.002 28.2 7.5 106 55-163 24-141 (307)
57 2rdx_A Mandelate racemase/muco 46.1 1.2E+02 0.0041 26.8 9.8 110 42-169 189-300 (379)
58 2pgw_A Muconate cycloisomerase 46.1 57 0.0019 29.1 7.6 102 55-168 200-303 (384)
59 2al1_A Enolase 1, 2-phospho-D- 45.6 1.8E+02 0.0061 26.5 13.2 96 56-162 273-371 (436)
60 1x87_A Urocanase protein; stru 45.3 58 0.002 30.4 7.3 88 33-135 154-257 (551)
61 1uwk_A Urocanate hydratase; hy 45.3 58 0.002 30.4 7.3 88 33-135 159-262 (557)
62 3rfa_A Ribosomal RNA large sub 45.1 1.3E+02 0.0045 27.2 9.8 77 92-168 254-349 (404)
63 2q5c_A NTRC family transcripti 43.7 89 0.003 25.0 7.7 65 92-162 80-147 (196)
64 2fkn_A Urocanate hydratase; ro 43.1 59 0.002 30.3 7.0 88 33-135 155-258 (552)
65 1mdl_A Mandelate racemase; iso 42.3 65 0.0022 28.3 7.3 108 42-164 189-298 (359)
66 2cw6_A Hydroxymethylglutaryl-C 42.1 56 0.0019 28.1 6.6 106 55-163 23-140 (298)
67 3zxw_B Ribulose bisphosphate c 41.7 73 0.0025 23.6 6.1 64 54-117 17-94 (118)
68 3lqv_P Splicing factor 3B subu 40.8 29 0.001 20.2 3.0 24 253-276 3-31 (39)
69 1vp8_A Hypothetical protein AF 40.5 1E+02 0.0036 24.9 7.4 78 92-169 28-110 (201)
70 3ik4_A Mandelate racemase/muco 40.4 84 0.0029 27.8 7.7 87 76-169 214-302 (365)
71 3qp1_A CVIR transcriptional re 40.4 1E+02 0.0034 24.1 7.5 88 55-158 29-130 (182)
72 3s5s_A Mandelate racemase/muco 40.0 83 0.0028 28.2 7.7 87 76-169 215-303 (389)
73 2oz8_A MLL7089 protein; struct 39.9 2E+02 0.0068 25.5 10.6 106 42-163 190-296 (389)
74 2og9_A Mandelate racemase/muco 39.7 63 0.0022 28.9 6.8 100 55-166 217-318 (393)
75 2qde_A Mandelate racemase/muco 39.4 80 0.0027 28.3 7.5 103 55-169 199-303 (397)
76 1nu5_A Chloromuconate cycloiso 39.0 1.9E+02 0.0064 25.4 9.9 103 55-169 198-302 (370)
77 2zad_A Muconate cycloisomerase 38.9 65 0.0022 28.2 6.7 105 55-169 192-297 (345)
78 2c35_A Human RPB4, DNA-directe 38.7 1.3E+02 0.0045 23.1 8.0 60 215-286 91-150 (152)
79 1v0l_A Endo-1,4-beta-xylanase 37.8 1.2E+02 0.0041 26.2 8.1 73 93-167 183-270 (313)
80 2o56_A Putative mandelate race 36.9 1E+02 0.0035 27.5 7.9 110 42-166 215-326 (407)
81 2xvc_A ESCRT-III, SSO0910; cel 36.8 23 0.00078 22.7 2.3 18 92-109 39-56 (59)
82 3ijw_A Aminoglycoside N3-acety 36.4 53 0.0018 28.1 5.4 53 62-114 17-74 (268)
83 2h9a_B CO dehydrogenase/acetyl 36.3 1.8E+02 0.0062 25.2 9.0 97 61-165 76-181 (310)
84 3u9i_A Mandelate racemase/muco 35.9 1E+02 0.0034 27.7 7.6 71 97-169 260-332 (393)
85 2p8b_A Mandelate racemase/muco 35.8 57 0.002 28.8 5.8 72 96-168 226-299 (369)
86 2akz_A Gamma enolase, neural; 34.9 2.6E+02 0.009 25.4 11.2 96 56-162 270-368 (439)
87 3tr9_A Dihydropteroate synthas 34.7 2.3E+02 0.0078 24.7 9.5 101 56-164 46-155 (314)
88 4hv0_A AVTR; ribbon-helix-heli 34.4 57 0.002 23.3 4.3 27 212-238 8-34 (106)
89 2nyg_A YOKD protein; PFAM02522 34.3 63 0.0022 27.6 5.6 52 62-113 15-71 (273)
90 2ovl_A Putative racemase; stru 34.2 2.4E+02 0.0082 24.7 10.6 100 55-166 201-302 (371)
91 2pp0_A L-talarate/galactarate 34.2 85 0.0029 28.1 6.8 100 55-166 230-331 (398)
92 3bjs_A Mandelate racemase/muco 33.2 92 0.0031 28.3 6.9 97 55-163 239-338 (428)
93 1y14_A B32, RPB4, DNA-directed 33.0 1.9E+02 0.0064 23.2 7.7 57 217-285 129-185 (187)
94 3noy_A 4-hydroxy-3-methylbut-2 32.9 2.6E+02 0.009 24.8 10.5 100 56-169 43-148 (366)
95 3q45_A Mandelate racemase/muco 32.4 86 0.003 27.8 6.4 73 96-169 224-298 (368)
96 2p0o_A Hypothetical protein DU 32.1 2.5E+02 0.0086 25.1 9.3 150 67-262 73-236 (372)
97 2pju_A Propionate catabolism o 32.1 68 0.0023 26.5 5.3 66 92-163 92-160 (225)
98 3ec1_A YQEH GTPase; atnos1, at 32.0 2.6E+02 0.009 24.5 9.9 83 40-124 99-181 (369)
99 3p6l_A Sugar phosphate isomera 31.8 2.1E+02 0.007 23.2 9.5 22 61-83 24-45 (262)
100 1bxn_I Rubisco, protein (ribul 31.7 97 0.0033 23.6 5.6 64 54-117 12-89 (139)
101 1tx2_A DHPS, dihydropteroate s 31.7 2.5E+02 0.0085 24.2 9.4 100 58-165 62-167 (297)
102 2dqw_A Dihydropteroate synthas 31.5 2E+02 0.0067 24.8 8.3 98 58-164 51-153 (294)
103 2poz_A Putative dehydratase; o 31.5 2.7E+02 0.0093 24.5 9.7 111 41-166 198-310 (392)
104 3ks6_A Glycerophosphoryl diest 31.2 90 0.0031 25.9 6.1 18 147-164 194-211 (250)
105 2vp8_A Dihydropteroate synthas 31.2 1.2E+02 0.004 26.6 6.8 100 57-164 63-167 (318)
106 3uj2_A Enolase 1; enzyme funct 31.1 3.1E+02 0.011 25.1 11.9 96 56-162 289-389 (449)
107 1r0m_A N-acylamino acid racema 30.9 65 0.0022 28.5 5.4 71 96-167 228-300 (375)
108 1sjd_A N-acylamino acid racema 30.9 2.4E+02 0.0081 24.7 9.1 101 55-168 193-295 (368)
109 1bwv_S Rubisco, protein (ribul 30.9 1.1E+02 0.0036 23.4 5.6 64 54-117 12-89 (138)
110 1tkk_A Similar to chloromucona 30.3 2.7E+02 0.0094 24.2 9.8 105 55-169 195-301 (366)
111 1rbl_M Ribulose 1,5 bisphospha 30.3 1.1E+02 0.0036 22.3 5.4 64 54-117 18-95 (109)
112 3lab_A Putative KDPG (2-keto-3 29.9 1.4E+02 0.0046 24.6 6.7 61 94-162 50-117 (217)
113 3i4k_A Muconate lactonizing en 29.8 2.2E+02 0.0077 25.1 8.8 73 96-169 234-308 (383)
114 2v5j_A 2,4-dihydroxyhept-2-ENE 28.8 2.7E+02 0.0092 23.7 11.6 67 98-164 29-96 (287)
115 3lmz_A Putative sugar isomeras 28.8 2.3E+02 0.0077 23.0 8.2 88 69-166 39-134 (257)
116 3qn3_A Enolase; structural gen 28.5 3.3E+02 0.011 24.6 10.4 96 56-162 261-361 (417)
117 2vef_A Dihydropteroate synthas 28.4 2.9E+02 0.0099 23.9 9.3 101 57-164 31-136 (314)
118 4h1z_A Enolase Q92ZS5; dehydra 28.2 1.8E+02 0.0062 26.1 7.9 87 77-169 258-345 (412)
119 2qgy_A Enolase from the enviro 28.0 3.1E+02 0.011 24.2 11.3 99 55-165 204-304 (391)
120 3dg3_A Muconate cycloisomerase 28.0 1E+02 0.0036 27.2 6.2 72 96-169 225-298 (367)
121 3l12_A Putative glycerophospho 28.0 1.5E+02 0.0052 25.4 7.1 27 101-127 173-199 (313)
122 4dwd_A Mandelate racemase/muco 27.9 1.1E+02 0.0038 27.4 6.4 68 96-165 231-300 (393)
123 3ix3_A Transcriptional activat 27.9 1.2E+02 0.004 23.2 5.9 82 56-158 14-110 (173)
124 2vvp_A Ribose-5-phosphate isom 27.8 2.2E+02 0.0074 22.2 8.1 94 59-164 15-111 (162)
125 3mel_A Thiamin pyrophosphokina 27.5 2.5E+02 0.0086 22.9 9.2 40 226-265 77-117 (222)
126 2qq6_A Mandelate racemase/muco 27.5 2.5E+02 0.0087 25.0 8.8 99 56-166 221-321 (410)
127 4fb5_A Probable oxidoreductase 27.5 50 0.0017 28.9 4.0 71 215-287 68-148 (393)
128 3lmz_A Putative sugar isomeras 27.5 2.5E+02 0.0084 22.7 8.3 65 97-163 34-108 (257)
129 2htm_A Thiazole biosynthesis p 27.5 93 0.0032 26.5 5.3 72 54-127 72-144 (268)
130 3mwc_A Mandelate racemase/muco 27.4 1.5E+02 0.0052 26.5 7.2 102 55-169 215-318 (400)
131 2p3z_A L-rhamnonate dehydratas 27.4 1.9E+02 0.0065 26.1 7.9 97 56-165 233-333 (415)
132 3guv_A Site-specific recombina 27.3 62 0.0021 24.9 4.1 30 77-106 76-105 (167)
133 3jva_A Dipeptide epimerase; en 26.8 1.9E+02 0.0064 25.3 7.6 87 77-169 209-298 (354)
134 2hxt_A L-fuconate dehydratase; 26.7 1.1E+02 0.0039 27.7 6.3 97 55-163 252-351 (441)
135 3l8m_A Probable thiamine pyrop 26.6 92 0.0032 25.3 5.2 41 225-265 74-114 (212)
136 2hzg_A Mandelate racemase/muco 26.3 3.1E+02 0.011 24.3 9.2 95 57-163 207-304 (401)
137 3mz2_A Glycerophosphoryl diest 26.3 1.3E+02 0.0043 25.8 6.2 66 100-165 149-236 (292)
138 1v5x_A PRA isomerase, phosphor 26.2 1.4E+02 0.0049 24.0 6.2 74 57-139 10-84 (203)
139 1ta3_B Endo-1,4-beta-xylanase; 26.2 3.1E+02 0.01 23.4 9.2 73 92-166 183-271 (303)
140 3sma_A FRBF; N-acetyl transfer 25.9 1.2E+02 0.004 26.2 5.7 53 62-114 24-81 (286)
141 3p3b_A Mandelate racemase/muco 25.7 3E+02 0.01 24.3 9.0 95 55-163 211-311 (392)
142 3pdi_B Nitrogenase MOFE cofact 25.6 3.8E+02 0.013 24.4 13.0 87 39-132 92-200 (458)
143 1wdd_S Ribulose bisphosphate c 25.4 1.4E+02 0.0048 22.4 5.4 64 54-117 19-107 (128)
144 2ox4_A Putative mandelate race 25.2 2.8E+02 0.0097 24.5 8.7 110 42-166 209-320 (403)
145 4had_A Probable oxidoreductase 25.1 48 0.0016 28.8 3.4 69 215-285 60-138 (350)
146 2gl5_A Putative dehydratase pr 24.5 3.7E+02 0.013 23.8 9.9 110 41-165 217-328 (410)
147 3aek_B Light-independent proto 24.4 4.3E+02 0.015 24.5 12.4 86 40-133 86-188 (525)
148 3otr_A Enolase; structural gen 24.3 4.2E+02 0.014 24.3 12.0 98 56-162 281-381 (452)
149 1wuf_A Hypothetical protein LI 24.2 1.5E+02 0.0051 26.4 6.5 87 77-169 227-315 (393)
150 1q7z_A 5-methyltetrahydrofolat 24.0 3.2E+02 0.011 25.8 9.0 96 57-164 338-438 (566)
151 2lr8_A CAsp8-associated protei 29.8 16 0.00056 24.3 0.0 18 141-158 17-34 (70)
152 1i1w_A Endo-1,4-beta-xylanase; 23.9 3.4E+02 0.011 23.1 10.4 73 92-166 184-270 (303)
153 2zc8_A N-acylamino acid racema 23.9 76 0.0026 28.0 4.4 71 96-167 221-293 (369)
154 2chr_A Chloromuconate cycloiso 23.6 1.3E+02 0.0046 26.4 6.0 73 96-169 228-302 (370)
155 1y7y_A C.AHDI; helix-turn-heli 23.5 39 0.0013 21.5 1.9 23 213-235 14-36 (74)
156 3emz_A Xylanase, endo-1,4-beta 23.4 2.2E+02 0.0076 24.8 7.3 76 93-168 187-295 (331)
157 2c4w_A 3-dehydroquinate dehydr 23.1 2.2E+02 0.0075 22.5 6.3 80 55-143 33-117 (176)
158 3h0g_D DNA-directed RNA polyme 23.1 1.7E+02 0.0059 22.0 5.7 58 216-286 76-133 (135)
159 3obe_A Sugar phosphate isomera 23.1 3.2E+02 0.011 22.9 8.3 17 147-163 117-133 (305)
160 4e5v_A Putative THUA-like prot 23.0 3.4E+02 0.012 22.9 8.6 66 42-114 6-93 (281)
161 1n82_A Xylanase, intra-cellula 22.7 2.1E+02 0.0072 24.8 7.1 73 93-165 188-293 (331)
162 2ewt_A BLDD, putative DNA-bind 22.6 39 0.0013 21.4 1.8 22 213-234 9-30 (71)
163 4e38_A Keto-hydroxyglutarate-a 22.6 2.9E+02 0.0099 22.8 7.5 57 96-162 73-132 (232)
164 2vws_A YFAU, 2-keto-3-deoxy su 22.6 3.4E+02 0.012 22.6 11.1 67 99-165 9-76 (267)
165 1nsj_A PRAI, phosphoribosyl an 22.6 1.4E+02 0.0049 24.1 5.5 74 57-139 11-85 (205)
166 3k94_A Thiamin pyrophosphokina 22.5 1.2E+02 0.0042 24.9 5.1 39 226-264 78-116 (223)
167 2d1z_A Endo-1,4-beta-D-xylanas 22.5 1E+02 0.0034 28.0 5.1 74 93-166 183-269 (436)
168 3no3_A Glycerophosphodiester p 22.4 1.2E+02 0.0042 24.8 5.2 66 100-165 122-204 (238)
169 2uyg_A 3-dehydroquinate dehydr 22.3 2.4E+02 0.0084 21.6 6.3 80 55-143 23-105 (149)
170 4ggi_A UDP-2,3-diacylglucosami 22.3 1.3E+02 0.0044 25.7 5.4 46 118-165 234-279 (283)
171 4e2i_2 DNA polymerase alpha su 22.3 93 0.0032 21.2 3.5 33 252-284 3-35 (78)
172 3ta6_A Triosephosphate isomera 22.0 1.6E+02 0.0054 25.1 5.8 47 224-270 215-262 (267)
173 3qz6_A HPCH/HPAI aldolase; str 21.9 3.5E+02 0.012 22.5 9.9 65 101-165 8-74 (261)
174 3szu_A ISPH, 4-hydroxy-3-methy 21.6 1.3E+02 0.0045 26.4 5.3 108 106-261 171-290 (328)
175 1t57_A Conserved protein MTH16 21.5 3.3E+02 0.011 22.1 7.4 88 79-169 25-117 (206)
176 2ztj_A Homocitrate synthase; ( 21.5 4.3E+02 0.015 23.4 9.5 100 55-162 21-134 (382)
177 2a6c_A Helix-turn-helix motif; 21.1 51 0.0017 22.0 2.1 27 213-239 19-45 (83)
178 3v7e_A Ribosome-associated pro 21.0 2E+02 0.0067 19.3 5.3 57 99-164 3-60 (82)
179 3h2y_A GTPase family protein; 21.0 4.2E+02 0.014 23.2 10.4 83 40-124 97-179 (368)
180 3g13_A Putative conjugative tr 20.8 43 0.0015 25.9 1.9 43 64-106 63-105 (169)
181 3lm8_A Thiamine pyrophosphokin 20.7 1.1E+02 0.0037 25.2 4.4 39 226-264 79-117 (222)
182 4gqa_A NAD binding oxidoreduct 20.7 94 0.0032 27.7 4.4 69 215-285 70-148 (412)
183 3ble_A Citramalate synthase fr 20.6 2E+02 0.0067 25.1 6.4 100 55-163 37-156 (337)
184 3vnd_A TSA, tryptophan synthas 20.5 2.9E+02 0.0099 23.2 7.3 9 253-261 217-225 (267)
185 3mcm_A 2-amino-4-hydroxy-6-hyd 20.4 4.2E+02 0.014 24.2 8.7 102 56-163 209-321 (442)
186 1chr_A Chloromuconate cycloiso 20.4 4.3E+02 0.015 23.0 10.6 86 78-169 215-302 (370)
187 2ppw_A Conserved domain protei 20.1 3.6E+02 0.012 22.0 7.6 93 61-165 21-118 (216)
No 1
>3erp_A Putative oxidoreductase; funded by the national institute of allergy and infectious D of NIH contract number HHSN272200700058C; 1.55A {Salmonella enterica subsp}
Probab=100.00 E-value=1.8e-50 Score=372.52 Aligned_cols=253 Identities=20% Similarity=0.284 Sum_probs=210.6
Q ss_pred ceeeccccccCC-------CccHHHhhhcC-------CCcEEEEecccCCC------CCCCHHHHHHHHHHHHhhcCCCc
Q 022300 17 PITMGLLKISMA-------SSSIEFVERGH-------QSSWISLTKWVPPP------VKMTSSIVRESIDVSRRRMDVPC 76 (299)
Q Consensus 17 ~~~~g~~~~~~a-------g~sE~~lg~~~-------R~~i~I~tK~~~~~------~~~~~~~i~~~ve~SL~~Lg~d~ 76 (299)
.++.|++.||+| |.||+++|+++ |+++||+||++... ...+++.+++++++||++||+||
T Consensus 73 Al~~Gi~~~DTA~~Yg~~~G~sE~~lG~al~~~~~~~R~~v~I~TK~g~~~~~~~~~~~~s~~~i~~~~e~SL~rLg~dy 152 (353)
T 3erp_A 73 AFDLGITHFDLANNYGPPPGSAECNFGRILQEDFLPWRDELIISTKAGYTMWDGPYGDWGSRKYLIASLDQSLKRMGLEY 152 (353)
T ss_dssp HHHTTCCEEECCTTCTTTTTHHHHHHHHHHHHHTGGGGGGCEEEEEESSCCSSSTTSSTTCHHHHHHHHHHHHHHHTCSC
T ss_pred HHHcCCCEEEChhhhCCCCChHHHHHHHHHHhhccCCCCeEEEEeeeccCCCCCcccCCCCHHHHHHHHHHHHHHhCCCe
Confidence 467888888886 56899999862 89999999996421 12379999999999999999999
Q ss_pred ccEEEEecCCCCCCcHHHHHHHHHHHHHcCcccEEEecCCCHHHHHHHHHc----CCCeeEeeecccccccChhhHHHHH
Q 022300 77 LDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN----GIPVVSNQVQHSVVDMRPQQKMAEL 152 (299)
Q Consensus 77 iDl~~lH~pd~~~~~~~~~~~~L~~l~~~Gkir~iGvs~~~~~~l~~~~~~----~~~~~~~q~~~n~~~~~~~~~~~~~ 152 (299)
||+|++|||+...+ ++++|++|++|+++||||+||||||++++++++.+. +++|+++|++||++++..+.+++++
T Consensus 153 iDl~~lH~p~~~~~-~~e~~~aL~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~~~~Q~~~~~~~~~~e~~ll~~ 231 (353)
T 3erp_A 153 VDIFYHHRPDPETP-LKETMKALDHLVRHGKALYVGISNYPADLARQAIDILEDLGTPCLIHQPKYSLFERWVEDGLLAL 231 (353)
T ss_dssp EEEEEECSCCTTSC-HHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHHHHHTCCEEEEECBCBTTBCGGGGTHHHH
T ss_pred EeEEEecCCCCCCC-HHHHHHHHHHHHHCCCccEEEecCCCHHHHHHHHHHHHHcCCCeEEeeccccccccchhhHHHHH
Confidence 99999999998888 899999999999999999999999999999888764 5789999999999998877789999
Q ss_pred HHHhCCeEEEcccccccccCCcccCCCCCCCCCCCCCCCchhHHHHhhhhhcCCchHHHHHHHHHHHHHHHhCCCHHHHH
Q 022300 153 CQLTGVKLITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASKHGVSIPVVA 232 (299)
Q Consensus 153 ~~~~gi~v~~~~pl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~la~~~~~s~aq~a 232 (299)
|+++||++++|+||++|+|++++... .|.. .+... ....+.. .+. .+...++.+.+.++|+++|+|++|+|
T Consensus 232 ~~~~gI~v~a~spL~~G~Ltg~~~~~---~p~~-~r~~~-~~~~~~~---~~~-~~~~~~~~~~l~~iA~~~g~t~aqva 302 (353)
T 3erp_A 232 LQEKGVGSIAFSPLAGGQLTDRYLNG---IPED-SRAAS-GSRFLKP---EQI-TADKLEKVRRLNELAARRGQKLSQMA 302 (353)
T ss_dssp HHHHTCEEEEBSTTGGGTSSGGGTC---------------------------C-CHHHHHHHHHHHHHHHHTTCCHHHHH
T ss_pred HHHcCCeEEEeccccccccCCCccCC---CCCc-ccccc-ccccccc---ccc-cHHHHHHHHHHHHHHHHhCCCHHHHH
Confidence 99999999999999999999998764 1111 11000 0000110 111 12234567899999999999999999
Q ss_pred HHHHHhCCCCceeeeccCCCCHHHHHHhHhhh-cCCCCHHHHHHHHHHHh
Q 022300 233 VRYILDQPAVAGSMIGVRLGLAEHIQDTNAIF-MLSLDEDDVNSIQEVTK 281 (299)
Q Consensus 233 l~~~l~~~~v~~~i~g~~~~~~e~l~enl~a~-~~~Lt~e~~~~i~~~~~ 281 (299)
|+|+++++.|+++|+|++ +++||++|++++ +++||+++++.|+++.+
T Consensus 303 L~w~l~~~~v~~vI~G~~--~~~~l~enl~a~~~~~Ls~ee~~~i~~~~~ 350 (353)
T 3erp_A 303 LAWVLRNDNVTSVLIGAS--KPSQIEDAVGMLANRRFSAAECAEIDAILE 350 (353)
T ss_dssp HHHHTTTSCCCEEEECCS--SHHHHHHHHHGGGGCCCCHHHHHHHHHHHH
T ss_pred HHHHHhCCCCcEEEeCCC--CHHHHHHHHHHhccCCCCHHHHHHHHHHHh
Confidence 999999999999999999 999999999999 88999999999999873
No 2
>3n6q_A YGHZ aldo-keto reductase; TIM barrel, oxidoreductase; 1.80A {Escherichia coli} SCOP: c.1.7.0 PDB: 4ast_A 4aub_A*
Probab=100.00 E-value=2.5e-50 Score=370.70 Aligned_cols=264 Identities=20% Similarity=0.276 Sum_probs=211.5
Q ss_pred ceeeccccccCC-------CccHHHhhhc-------CCCcEEEEecccCCC------CCCCHHHHHHHHHHHHhhcCCCc
Q 022300 17 PITMGLLKISMA-------SSSIEFVERG-------HQSSWISLTKWVPPP------VKMTSSIVRESIDVSRRRMDVPC 76 (299)
Q Consensus 17 ~~~~g~~~~~~a-------g~sE~~lg~~-------~R~~i~I~tK~~~~~------~~~~~~~i~~~ve~SL~~Lg~d~ 76 (299)
.++.|++.||+| |.||+++|++ .|+++||+||+|... ...+++.+++++++||++|||||
T Consensus 52 Al~~Gi~~~DTA~~Yg~~~G~sE~~lG~al~~~~~~~R~~~~I~TK~g~~~~~~~~~~~~s~~~i~~~~e~SL~rL~~dy 131 (346)
T 3n6q_A 52 AFDLGITHFDLANNYGPPPGSAEENFGRLLREDFAAYRDELIISTKAGYDMWPGPYGSGGSRKYLLASLDQSLKRMGLEY 131 (346)
T ss_dssp HHHTTCCEEECCTTCTTTTTHHHHHHHHHHHHHCTTTGGGCEEEEEECSCCSSSTTSSSSCHHHHHHHHHHHHHHHTCSC
T ss_pred HHHcCCCEEECccccCCCCCcHHHHHHHHHHhhcccccccEEEEEEecccCCCCCCCCCCCHHHHHHHHHHHHHHhCCCc
Confidence 467898999886 5689999987 399999999986321 12389999999999999999999
Q ss_pred ccEEEEecCCCCCCcHHHHHHHHHHHHHcCcccEEEecCCCHHHHHHHHHc----CCCeeEeeecccccccChhh-HHHH
Q 022300 77 LDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN----GIPVVSNQVQHSVVDMRPQQ-KMAE 151 (299)
Q Consensus 77 iDl~~lH~pd~~~~~~~~~~~~L~~l~~~Gkir~iGvs~~~~~~l~~~~~~----~~~~~~~q~~~n~~~~~~~~-~~~~ 151 (299)
||+|++|+|+...+ ++++|++|++|+++||||+||||||+.++++++... +.+++++|++||++++..+. ++++
T Consensus 132 iDl~~lH~p~~~~~-~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~~~~Q~~~~l~~~~~~~~~l~~ 210 (346)
T 3n6q_A 132 VDIFYSHRVDENTP-MEETASALAHAVQSGKALYVGISSYSPERTQKMVELLREWKIPLLIHQPSYNLLNRWVDKSGLLD 210 (346)
T ss_dssp EEEEEECSCCTTSC-HHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHHHTTTCCCCEEECBCBTTBCHHHHTTHHH
T ss_pred EeEEEEeCCCCCCC-HHHHHHHHHHHHHcCCeeEEEeCCCCHHHHHHHHHHHHHcCCCeEEEeccCchhhcCcchhhHHH
Confidence 99999999998887 899999999999999999999999999999887653 57899999999999988766 7999
Q ss_pred HHHHhCCeEEEcccccccccCCcccCCCCCCCCCCCCCCCchhHHHHhhhhhcCCchHHHHHHHHHHHHHHHhCCCHHHH
Q 022300 152 LCQLTGVKLITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASKHGVSIPVV 231 (299)
Q Consensus 152 ~~~~~gi~v~~~~pl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~la~~~~~s~aq~ 231 (299)
+|+++||++++|+||++|+|++++... .|.. .+.... ...|......+. .+...++++.+.++|+++|+|++|+
T Consensus 211 ~~~~~gi~v~a~spL~~G~L~g~~~~~---~~~~-~r~~~~-~~~~~~~~~~~~-~~~~~~~~~~l~~iA~~~g~t~aqv 284 (346)
T 3n6q_A 211 TLQNNGVGCIAFTPLAQGLLTGKYLNG---IPQD-SRMHRE-GNKVRGLTPKML-TEANLNSLRLLNEMAQQRGQSMAQM 284 (346)
T ss_dssp HHHHHTCEEEEBSTTGGGGGGTSCC----------------------------C-CHHHHHHHHHHHHHHHHTTCCHHHH
T ss_pred HHHHcCCeEEEeccccCeecCCCccCC---CCCc-cccccc-cccccccchhhh-hHHHHHHHHHHHHHHHHhCcCHHHH
Confidence 999999999999999999999988753 1101 110000 000000001111 1234456789999999999999999
Q ss_pred HHHHHHhCCCCceeeeccCCCCHHHHHHhHhhh-cCCCCHHHHHHHHHHHhcCCCCCccc
Q 022300 232 AVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIF-MLSLDEDDVNSIQEVTKKGKDLLGVI 290 (299)
Q Consensus 232 al~~~l~~~~v~~~i~g~~~~~~e~l~enl~a~-~~~Lt~e~~~~i~~~~~~~~~~~~~~ 290 (299)
||+|+++++.|+++|+|++ +++||++|++++ +++||+++++.|+++.++ .....|.
T Consensus 285 aL~w~l~~~~v~~~I~g~~--~~~~l~en~~a~~~~~Ls~e~~~~i~~~~~~-~~~~~w~ 341 (346)
T 3n6q_A 285 ALSWLLKDDRVTSVLIGAS--RAEQLEENVQALNNLTFSTKELAQIDQHIAD-GELNLWQ 341 (346)
T ss_dssp HHHHHTSSTTCSEEEECCS--SHHHHHHHHGGGGCCCCCHHHHHHHHHHHHH-TTCC---
T ss_pred HHHHHHhCCCCcEEEcCCC--CHHHHHHHHhhccCCCCCHHHHHHHHHHHhc-cCCcchh
Confidence 9999999999999999999 999999999998 689999999999999866 3455563
No 3
>1pyf_A IOLS protein; beta-alpha barrel, aldo-keto reductase, TIM barrel, oxidoreductase; 1.80A {Bacillus subtilis} SCOP: c.1.7.1 PDB: 1pz0_A*
Probab=100.00 E-value=7.4e-51 Score=369.27 Aligned_cols=250 Identities=21% Similarity=0.338 Sum_probs=212.1
Q ss_pred ceeeccccccCCC-----ccHHHhhhcC----CCcEEEEecccCCC------CCCCHHHHHHHHHHHHhhcCCCcccEEE
Q 022300 17 PITMGLLKISMAS-----SSIEFVERGH----QSSWISLTKWVPPP------VKMTSSIVRESIDVSRRRMDVPCLDMLQ 81 (299)
Q Consensus 17 ~~~~g~~~~~~ag-----~sE~~lg~~~----R~~i~I~tK~~~~~------~~~~~~~i~~~ve~SL~~Lg~d~iDl~~ 81 (299)
.++.|++.||+|. .||+++|+++ |++++|+||++... .+.+++.+++++++||++|||||||+|+
T Consensus 44 Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~~R~~~~i~TK~g~~~~~~~~~~~~~~~~i~~~~~~SL~rL~~dyiDl~~ 123 (312)
T 1pyf_A 44 AIRNGVTMLDTAYIYGIGRSEELIGEVLREFNREDVVIATKAAHRKQGNDFVFDNSPDFLKKSVDESLKRLNTDYIDLFY 123 (312)
T ss_dssp HHHTTCCEEECCTTTTTTHHHHHHHHHHTTSCGGGCEEEEEECEEEETTEEEECCCHHHHHHHHHHHHHHHTSSCBSEEE
T ss_pred HHHcCCCEEECccccCCCchHHHHHHHhhhcCCCeEEEEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEE
Confidence 4678999999874 5999999973 78999999975211 3578999999999999999999999999
Q ss_pred EecCCCCCCcHHHHHHHHHHHHHcCcccEEEecCCCHHHHHHHHHcCCCeeEeeecccccccChhhHHHHHHHHhCCeEE
Q 022300 82 FHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILENGIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLI 161 (299)
Q Consensus 82 lH~pd~~~~~~~~~~~~L~~l~~~Gkir~iGvs~~~~~~l~~~~~~~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~ 161 (299)
+|||+...+ .+++|++|++|+++||||+||||||+.++++++++. .+|+++|++||++++..+.+++++|+++||+++
T Consensus 124 lH~p~~~~~-~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~-~~~~~~Q~~~~~~~~~~e~~l~~~~~~~gi~v~ 201 (312)
T 1pyf_A 124 IHFPDEHTP-KDEAVNALNEMKKAGKIRSIGVSNFSLEQLKEANKD-GLVDVLQGEYNLLNREAEKTFFPYTKEHNISFI 201 (312)
T ss_dssp ECSCCSSSC-HHHHHHHHHHHHHTTSBSCEEEESCCHHHHHHHTTT-SCCCEEEEECBTTBCGGGTTHHHHHHHHTCEEE
T ss_pred eCCCCCCCC-HHHHHHHHHHHHHCCCcCEEEecCCCHHHHHHHHhh-CCceEEeccCCccccchHHHHHHHHHHcCCeEE
Confidence 999998877 899999999999999999999999999999999875 579999999999999887789999999999999
Q ss_pred EcccccccccCCcccCCCCCCCCCCCCCCCchhHHHHhhhhhcCCc--hHHHHHHHHHHHHHHHhCCCHHHHHHHHHHhC
Q 022300 162 TYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGW--SQFQVLLQTLKRIASKHGVSIPVVAVRYILDQ 239 (299)
Q Consensus 162 ~~~pl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~la~~~~~s~aq~al~~~l~~ 239 (299)
+|+||++|+|++++... ..+...+.+. ...+|..+ +......+.+.++|+++|+|++|+||+|++++
T Consensus 202 a~spL~~G~L~~~~~~~---~~~~~~~~r~--------~~~~~~~~~~~~~~~~~~~l~~ia~~~g~s~aqvaL~w~l~~ 270 (312)
T 1pyf_A 202 PYFPLVSGLLAGKYTED---TTFPEGDLRN--------EQEHFKGERFKENIRKVNKLAPIAEKHNVDIPHIVLAWYLAR 270 (312)
T ss_dssp EESTTTTTGGGTCCCTT---CCCCTTCGGG--------GSGGGSHHHHHHHHHHHHTTHHHHHHTTSCHHHHHHHHHHHS
T ss_pred EecccccccccCCCCCC---CCCCCccccc--------ccccccchhHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHhC
Confidence 99999999999987643 1111111110 01111111 11234568899999999999999999999999
Q ss_pred CCCceeeeccCCCCHHHHHHhHhhhcCCCCHHHHHHHHHHHh
Q 022300 240 PAVAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTK 281 (299)
Q Consensus 240 ~~v~~~i~g~~~~~~e~l~enl~a~~~~Lt~e~~~~i~~~~~ 281 (299)
+.|+++|+|++ +++||++|+++++++||+++++.|++++.
T Consensus 271 ~~v~~~I~g~~--~~~~l~en~~a~~~~L~~~~~~~l~~~~~ 310 (312)
T 1pyf_A 271 PEIDILIPGAK--RADQLIDNIKTADVTLSQEDISFIDKLFA 310 (312)
T ss_dssp TTCCCBCCCCS--SHHHHHHHHGGGGCCCCHHHHHHHHHHTC
T ss_pred CCCeEEEeCCC--CHHHHHHHHhhccCCCCHHHHHHHHHHhc
Confidence 99999999999 99999999999999999999999999864
No 4
>3eau_A Voltage-gated potassium channel subunit beta-2; kvbeta, cortisone, NADPH, cytoplasm, ION transport, ionic channel, NADP, phosphoprotein; HET: NDP PDN; 1.82A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 2r9r_A* 2a79_A* 3lnm_A* 1exb_A* 3eb4_A* 3eb3_A* 1qrq_A* 1zsx_A*
Probab=100.00 E-value=2.1e-50 Score=368.62 Aligned_cols=256 Identities=18% Similarity=0.241 Sum_probs=212.6
Q ss_pred ceeeccccccCC-----CccHHHhhhc------CCCcEEEEecccCC-----CCCCCHHHHHHHHHHHHhhcCCCcccEE
Q 022300 17 PITMGLLKISMA-----SSSIEFVERG------HQSSWISLTKWVPP-----PVKMTSSIVRESIDVSRRRMDVPCLDML 80 (299)
Q Consensus 17 ~~~~g~~~~~~a-----g~sE~~lg~~------~R~~i~I~tK~~~~-----~~~~~~~~i~~~ve~SL~~Lg~d~iDl~ 80 (299)
.++.|++.||+| |.||+++|++ .|++++|+||++.. ..+++++.+++++++||++||+||||+|
T Consensus 42 Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~~~~R~~v~I~TK~~~~~~~~~~~~~s~~~i~~~~e~SL~rLg~dyiDl~ 121 (327)
T 3eau_A 42 AYDNGINLFDTAEVYAAGKAEVVLGNIIKKKGWRRSSLVITTKIFWGGKAETERGLSRKHIIEGLKASLERLQLEYVDVV 121 (327)
T ss_dssp HHHTTCCEEEEETTGGGGHHHHHHHHHHHHHTCCGGGCEEEEEESBCCSSGGGBSSSHHHHHHHHHHHHHHHTCSCEEEE
T ss_pred HHHcCCCEEECccccCCCChHHHHHHHHHhcCCccCeEEEEEeecCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCccceE
Confidence 477888888876 5789999987 48999999998532 1246899999999999999999999999
Q ss_pred EEecCCCCCCcHHHHHHHHHHHHHcCcccEEEecCCCHHHHHHHHHc-----CCCeeEeeecccccccCh-hhHHHHHHH
Q 022300 81 QFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-----GIPVVSNQVQHSVVDMRP-QQKMAELCQ 154 (299)
Q Consensus 81 ~lH~pd~~~~~~~~~~~~L~~l~~~Gkir~iGvs~~~~~~l~~~~~~-----~~~~~~~q~~~n~~~~~~-~~~~~~~~~ 154 (299)
++|||+...+ ++++|++|++|+++||||+||||||+.+++.++... .++|+++|++||++++.. +.+++++|+
T Consensus 122 ~lH~p~~~~~-~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~~~~~Q~~~~~~~~~~~~~~l~~~~~ 200 (327)
T 3eau_A 122 FANRPDPNTP-MEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAYSVARQFNLIPPICEQAEYHMFQREKVEVQLPELFH 200 (327)
T ss_dssp EESSCCTTSC-HHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHHHHTTCCCCCEEEEECBTTBCHHHHHHHHHHHH
T ss_pred EEeCCCCCCC-HHHHHHHHHHHHHcCCeeEEeecCCCHHHHHHHHHHHHHcCCCCceeecccccccccchhHhhHHHHHH
Confidence 9999998887 899999999999999999999999999999888764 368999999999998864 456899999
Q ss_pred HhCCeEEEcccccccccCCcccCCCCCCCCCCCCCCCchhHHHHhhhhhcCCc--hHHHHHHHHHHHHHHHhCCCHHHHH
Q 022300 155 LTGVKLITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGW--SQFQVLLQTLKRIASKHGVSIPVVA 232 (299)
Q Consensus 155 ~~gi~v~~~~pl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~la~~~~~s~aq~a 232 (299)
++||++++|+||++|+|++++... .+.. .+... ..+.....++..+ .....+.+.+.++|+++|+|++|+|
T Consensus 201 ~~gi~v~a~spL~~G~Ltg~~~~~---~~~~-~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~ia~~~g~s~aqva 273 (327)
T 3eau_A 201 KIGVGAMTWSPLACGIVSGKYDSG---IPPY-SRASL---KGYQWLKDKILSEEGRRQQAKLKELQAIAERLGCTLPQLA 273 (327)
T ss_dssp HHCCEEEEECTTGGGGGGTTTTTS---CCTT-SGGGS---TTCHHHHHHHHSHHHHHHHHHHHHHHHHHHHHTSCHHHHH
T ss_pred HcCCeEEEeccccCceecCcccCC---CCCC-ccccc---ccccccccccccchhHHHHHHHHHHHHHHHHhCcCHHHHH
Confidence 999999999999999999998764 1111 11110 1111111111111 1223557899999999999999999
Q ss_pred HHHHHhCCCCceeeeccCCCCHHHHHHhHhhhcC--CCCHHHHHHHHHHHhc
Q 022300 233 VRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFML--SLDEDDVNSIQEVTKK 282 (299)
Q Consensus 233 l~~~l~~~~v~~~i~g~~~~~~e~l~enl~a~~~--~Lt~e~~~~i~~~~~~ 282 (299)
|+|++++++|+++|+|++ +++||++|++++++ +||+++++.|+++.++
T Consensus 274 L~w~l~~~~v~~vI~g~~--~~~~l~en~~a~~~~~~L~~e~~~~i~~~~~~ 323 (327)
T 3eau_A 274 IAWCLRNEGVSSVLLGAS--NAEQLMENIGAIQVLPKLSSSIVHEIDSILGN 323 (327)
T ss_dssp HHHHHSSTTCCEEEECCS--SHHHHHHHHGGGGGGGGCCHHHHHHHHHHHCC
T ss_pred HHHHHhCCCCceEEeCCC--CHHHHHHHHHHhccCCCCCHHHHHHHHHHhhc
Confidence 999999999999999999 99999999999998 9999999999999754
No 5
>1gve_A Aflatoxin B1 aldehyde reductase member 3; oxidoreductase, aldo-keto reductase, succinic semialdehyde oxidoreductase, AKR7 family; HET: NAP CIT; 1.38A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 2clp_A* 2c91_A*
Probab=100.00 E-value=7e-50 Score=365.12 Aligned_cols=261 Identities=16% Similarity=0.198 Sum_probs=214.7
Q ss_pred ceeeccccccCC-----CccHHHhhhcC------CCcEEEEecccCC-CCCCCHHHHHHHHHHHHhhcCCCcccEEEEec
Q 022300 17 PITMGLLKISMA-----SSSIEFVERGH------QSSWISLTKWVPP-PVKMTSSIVRESIDVSRRRMDVPCLDMLQFHW 84 (299)
Q Consensus 17 ~~~~g~~~~~~a-----g~sE~~lg~~~------R~~i~I~tK~~~~-~~~~~~~~i~~~ve~SL~~Lg~d~iDl~~lH~ 84 (299)
.++.|++.||+| |.||+++|+++ |++++|+||+++. ..+.+++.+++++++||++||+||||+|++|+
T Consensus 31 Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~~~~r~~~~i~TK~~~~~~~~~~~~~i~~~~~~SL~rL~~dyiDl~~lH~ 110 (327)
T 1gve_A 31 FLQRGHTEIDTAFVYANGQSETILGDLGLGLGRSGCKVKIATKAAPMFGKTLKPADVRFQLETSLKRLQCPRVDLFYLHF 110 (327)
T ss_dssp HHHTTCCEEECCTTGGGGHHHHHHTTSCCCTTSTTCCSEEEEEECSCTTCCSSHHHHHHHHHHHHHHTTCSCEEEEEECS
T ss_pred HHHcCCCEEEchhhcCCCchHHHHHHHHhhcCCCCCeEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCeEeEEEecC
Confidence 366788888887 57999999984 6789999999752 12578999999999999999999999999999
Q ss_pred CCCCCCcHHHHHHHHHHHHHcCcccEEEecCCCHHHHHHHHHc----C-CCeeEeeecccccccChhhHHHHHHHHhCCe
Q 022300 85 WDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN----G-IPVVSNQVQHSVVDMRPQQKMAELCQLTGVK 159 (299)
Q Consensus 85 pd~~~~~~~~~~~~L~~l~~~Gkir~iGvs~~~~~~l~~~~~~----~-~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~ 159 (299)
|+...+ ++++|++|++|+++||||+||||||+.+++.++.+. + ++|+++|++||++++..+.+++++|+++||+
T Consensus 111 p~~~~~-~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~g~~~~~~~Q~~~~~~~~~~e~~l~~~~~~~gi~ 189 (327)
T 1gve_A 111 PDHGTP-IEETLQACHQLHQEGKFVELGLSNYVSWEVAEICTLCKKNGWIMPTVYQGMYNAITRQVETELFPCLRHFGLR 189 (327)
T ss_dssp CCTTSC-HHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHHHHHTCCCEEEEEEECBTTBCGGGTTHHHHHHHHTCE
T ss_pred CCCCCC-HHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHcCCCCeEEEeccCcceecccHHHHHHHHHHcCCe
Confidence 998877 899999999999999999999999999999888764 3 6899999999999998777899999999999
Q ss_pred EEEcccccccccCCcccCCCCCCCCCCCCCCCc-hhHHHHhhhhhcCCchHHHHHHHHHHHHHHH----hCCCHHHHHHH
Q 022300 160 LITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTP-SLQKYKRMVDAWGGWSQFQVLLQTLKRIASK----HGVSIPVVAVR 234 (299)
Q Consensus 160 v~~~~pl~~G~L~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~la~~----~~~s~aq~al~ 234 (299)
+++|+||++|+|++++.....+......+.... ....|.. ++... ...+..+.+.++|++ +|+|++|+||+
T Consensus 190 v~a~spL~~G~Ltg~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-~~~~~~~~l~~ia~~~~~~~g~s~aqvaL~ 265 (327)
T 1gve_A 190 FYAFNPLAGGLLTGRYKYQDKDGKNPESRFFGNPFSQLYMD---RYWKE-EHFNGIALVEKALKTTYGPTAPSMISAAVR 265 (327)
T ss_dssp EEEECTTGGGGGGTCCCGGGGGSCCCSSSSSSCTTHHHHHH---HHCSH-HHHHHHHHHHHHHHHHHCTTCCCHHHHHHH
T ss_pred EEEecccccccccCcccCCCccccCCCccccccccchhhhh---cccCh-HHHHHHHHHHHHHHhhccccCCCHHHHHHH
Confidence 999999999999998764311000000111000 1112211 22222 233457899999999 99999999999
Q ss_pred HHHhCCCC-----ceeeeccCCCCHHHHHHhHhhhcC-CCCHHHHHHHHHHHhcCC
Q 022300 235 YILDQPAV-----AGSMIGVRLGLAEHIQDTNAIFML-SLDEDDVNSIQEVTKKGK 284 (299)
Q Consensus 235 ~~l~~~~v-----~~~i~g~~~~~~e~l~enl~a~~~-~Lt~e~~~~i~~~~~~~~ 284 (299)
|+++++.| .++|+|++ +++||++|+++++. +||+++++.|+++.+..+
T Consensus 266 w~l~~~~v~~~~g~~~I~g~~--~~~~l~en~~a~~~~~L~~e~~~~l~~~~~~~~ 319 (327)
T 1gve_A 266 WMYHHSQLKGTQGDAVILGMS--SLEQLEQNLALVEEGPLEPAVVDAFDQAWNLVA 319 (327)
T ss_dssp HHHHTSSCCGGGTCEEEECCS--SHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHG
T ss_pred HHHhCCCccccCCCeEEECCC--CHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcc
Confidence 99999999 78999999 99999999999987 899999999999976543
No 6
>3n2t_A Putative oxidoreductase; aldo/keto reductase superfamily, AKR, AKR11B4, TIM barrel; 2.00A {Gluconobacter oxydans} SCOP: c.1.7.0
Probab=100.00 E-value=4.4e-50 Score=369.21 Aligned_cols=252 Identities=22% Similarity=0.366 Sum_probs=214.6
Q ss_pred ceeeccccccCCC-----ccHHHhhhc---CCCcEEEEecccCCC-----------CCCCHHHHHHHHHHHHhhcCCCcc
Q 022300 17 PITMGLLKISMAS-----SSIEFVERG---HQSSWISLTKWVPPP-----------VKMTSSIVRESIDVSRRRMDVPCL 77 (299)
Q Consensus 17 ~~~~g~~~~~~ag-----~sE~~lg~~---~R~~i~I~tK~~~~~-----------~~~~~~~i~~~ve~SL~~Lg~d~i 77 (299)
.++.|++.||+|. .||+++|++ .|++++|+||++... .+.+++.+++++++||++||+|||
T Consensus 61 Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~R~~v~I~TK~g~~~~~~~~~~~~~~~~~~~~~i~~~~e~SL~rLg~dyi 140 (348)
T 3n2t_A 61 ALDEGINLIDTAPVYGFGHSEEIVGRALAEKPNKAHVATKLGLHWVGEDEKNMKVFRDSRPARIRKEVEDSLRRLRVETI 140 (348)
T ss_dssp HHHTTCCEEECCTTGGGGHHHHHHHHHHHHSCCCCEEEEEECEEEESSSTTTCEEEECCCHHHHHHHHHHHHHHHTCSSE
T ss_pred HHHcCCCEEEChhhcCCChHHHHHHHHHhhCCCeEEEEEeecCCCcCCCcccccccCCCCHHHHHHHHHHHHHHhCCCcE
Confidence 3667777887753 599999997 599999999995321 136899999999999999999999
Q ss_pred cEEEEecCCCCCCcHHHHHHHHHHHHHcCcccEEEecCCCHHHHHHHHHcCCCeeEeeecccccccChhhHHHHHHHHhC
Q 022300 78 DMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILENGIPVVSNQVQHSVVDMRPQQKMAELCQLTG 157 (299)
Q Consensus 78 Dl~~lH~pd~~~~~~~~~~~~L~~l~~~Gkir~iGvs~~~~~~l~~~~~~~~~~~~~q~~~n~~~~~~~~~~~~~~~~~g 157 (299)
|+|++|||+...+ ++++|++|++|+++||||+||||||+.++++++++.. +|+++|++||++++..+.+++++|+++|
T Consensus 141 Dl~~lH~p~~~~~-~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~-~~~~~Q~~~nl~~~~~e~~l~~~~~~~g 218 (348)
T 3n2t_A 141 DLEQIHWPDDKTP-IDESARELQKLHQDGKIRALGVSNFSPEQMDIFREVA-PLATIQPPLNLFERTIEKDILPYAEKHN 218 (348)
T ss_dssp EEEEESSCCTTSC-HHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHS-CCCEEECBCBTTBCGGGGTHHHHHHHHT
T ss_pred EEEEecCCCCCCC-HHHHHHHHHHHHHhCcceEEecCCCCHHHHHHHHHhC-CccEEEeeecCccCchHHHHHHHHHHcC
Confidence 9999999998887 8999999999999999999999999999999999874 7999999999999988888999999999
Q ss_pred CeEEEcccccccccCCcccCCCCCCCCCCCCCCCchhHHHHhhhhhcCCc--hHHHHHHHHHHHHHHHhCCCHHHHHHHH
Q 022300 158 VKLITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGW--SQFQVLLQTLKRIASKHGVSIPVVAVRY 235 (299)
Q Consensus 158 i~v~~~~pl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~la~~~~~s~aq~al~~ 235 (299)
|++++|+||++|+|++++.... ++...+.+.. . ..|..+ ....++.+.+.++|+++|+|++|+||+|
T Consensus 219 i~v~a~spL~~G~Ltg~~~~~~---~~~~~~~r~~-~-------~~~~~~~~~~~~~~~~~l~~iA~~~g~t~aqvaL~w 287 (348)
T 3n2t_A 219 AVVLAYGALCRGLLTGKMNRDT---TFPKDDLRSN-D-------PKFQKPNFEKYLAAMDEFEKLAEKRGKSVMAFAVRW 287 (348)
T ss_dssp CEEEEBCTTGGGGGGTCCCTTC---CCCTTSGGGG-C-------GGGSTTHHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred CeEEEeecccCccccCCccCCC---CCCCcchhhc-c-------cccchhhHHHHHHHHHHHHHHHHHhCCCHHHHHHHH
Confidence 9999999999999999987641 1111111100 0 011111 2234567899999999999999999999
Q ss_pred HHhCCCCceeeeccCCCCHHHHHHhHhhhcCCCCHHHHHHHHHHHhcCC
Q 022300 236 ILDQPAVAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKKGK 284 (299)
Q Consensus 236 ~l~~~~v~~~i~g~~~~~~e~l~enl~a~~~~Lt~e~~~~i~~~~~~~~ 284 (299)
++++ +|+++|+|++ +++||++|+++++++||+++++.|+++.++..
T Consensus 288 ~l~~-~v~~~I~g~~--~~~~l~enl~a~~~~L~~e~~~~l~~~~~~~~ 333 (348)
T 3n2t_A 288 VLDQ-GPVIALWGAR--KPGQVSGVKDVFGWSLTDEEKKAVDDILARHV 333 (348)
T ss_dssp HHTT-TTEEEEEECS--SGGGGTTHHHHSSCCCCHHHHHHHHHHHHHHS
T ss_pred HHHC-CCcEEEeCCC--CHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhc
Confidence 9999 8889999999 99999999999999999999999999988754
No 7
>3lut_A Voltage-gated potassium channel subunit beta-2; voltage gating, potassium channel, KV1.2, gating charges, no analysis, ION transport; HET: NAP; 2.90A {Rattus norvegicus}
Probab=100.00 E-value=5.6e-50 Score=371.07 Aligned_cols=258 Identities=18% Similarity=0.226 Sum_probs=212.4
Q ss_pred ceeeccccccCC-----CccHHHhhhc------CCCcEEEEecccCC-----CCCCCHHHHHHHHHHHHhhcCCCcccEE
Q 022300 17 PITMGLLKISMA-----SSSIEFVERG------HQSSWISLTKWVPP-----PVKMTSSIVRESIDVSRRRMDVPCLDML 80 (299)
Q Consensus 17 ~~~~g~~~~~~a-----g~sE~~lg~~------~R~~i~I~tK~~~~-----~~~~~~~~i~~~ve~SL~~Lg~d~iDl~ 80 (299)
.++.|++.||+| |.||+++|++ .|++++|+||++.. ..+++++.+++++++||++||+||||||
T Consensus 76 Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~~~~R~~v~I~TK~~~~~~~~~~~~~s~~~i~~~~e~SL~rLg~dyiDl~ 155 (367)
T 3lut_A 76 AYDNGINLFDTAEVYAAGKAEVVLGNIIKKKGWRRSSLVITTKIFWGGKAETERGLSRKHIIEGLKASLERLQLEYVDVV 155 (367)
T ss_dssp HHHTTCCEEEEETTGGGGHHHHHHHHHHHHHTCCGGGCEEEEEESBCCSSGGGBSSCHHHHHHHHHHHHHHHTCSCEEEE
T ss_pred HHHcCCCEEECccccCCCchHHHHHHHHHhCCCCCceEEEEeccccCCCCccCCCCCHHHHHHHHHHHHHHhCCCccceE
Confidence 367788888875 5689999987 38999999999532 1246899999999999999999999999
Q ss_pred EEecCCCCCCcHHHHHHHHHHHHHcCcccEEEecCCCHHHHHHHHHc-----CCCeeEeeecccccccCh-hhHHHHHHH
Q 022300 81 QFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-----GIPVVSNQVQHSVVDMRP-QQKMAELCQ 154 (299)
Q Consensus 81 ~lH~pd~~~~~~~~~~~~L~~l~~~Gkir~iGvs~~~~~~l~~~~~~-----~~~~~~~q~~~n~~~~~~-~~~~~~~~~ 154 (299)
++|||+...+ ++++|++|++|+++||||+||||||+.+++.++... .++|+++|++||++++.. +.+++++|+
T Consensus 156 ~lH~pd~~~~-~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~~~~~Q~~~~~~~~~~~e~~l~~~~~ 234 (367)
T 3lut_A 156 FANRPDPNTP-MEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAYSVARQFNLIPPICEQAEYHMFQREKVEVQLPELFH 234 (367)
T ss_dssp EESSCCTTSC-HHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHHHHHTCCCCCEEEEECBTTBCHHHHTHHHHHHH
T ss_pred EecCCCCCCC-HHHHHHHHHHHHHcCCeeEEEecCCCHHHHHHHHHHHHHcCCCCceeeeccccceecchhHhHHHHHHH
Confidence 9999998887 899999999999999999999999999999888764 368999999999999876 558999999
Q ss_pred HhCCeEEEcccccccccCCcccCCCCCCCCCCCCCCCchhHHHHhhhhhcCCc--hHHHHHHHHHHHHHHHhCCCHHHHH
Q 022300 155 LTGVKLITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGW--SQFQVLLQTLKRIASKHGVSIPVVA 232 (299)
Q Consensus 155 ~~gi~v~~~~pl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~la~~~~~s~aq~a 232 (299)
++||++++|+||++|+|++++... .+. ..+.......++. .++..+ .......+.+.++|+++|+|++|+|
T Consensus 235 ~~gi~v~a~spL~~G~Ltgk~~~~---~~~-~~r~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~iA~~~g~t~aqva 307 (367)
T 3lut_A 235 KIGVGAMTWSPLACGIVSGKYDSG---IPP-YSRASLKGYQWLK---DKILSEEGRRQQAKLKELQAIAERLGCTLPQLA 307 (367)
T ss_dssp HHCCEEEEECTTGGGGGGTTTTTS---CCT-TSGGGSTTCHHHH---HHHTSHHHHHHHHHHHHHHHHHHHTTSCHHHHH
T ss_pred HcCCeEEEecccccccccCCcCCC---CCC-ccccccccccccc---ccccchhhHHHHHHHHHHHHHHHHhCCCHHHHH
Confidence 999999999999999999998764 111 0111000111111 111111 1123456899999999999999999
Q ss_pred HHHHHhCCCCceeeeccCCCCHHHHHHhHhhhcC--CCCHHHHHHHHHHHhcCC
Q 022300 233 VRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFML--SLDEDDVNSIQEVTKKGK 284 (299)
Q Consensus 233 l~~~l~~~~v~~~i~g~~~~~~e~l~enl~a~~~--~Lt~e~~~~i~~~~~~~~ 284 (299)
|+|++++++|+++|+|++ +++||++|++++++ +||+++++.|+++.+..+
T Consensus 308 L~w~l~~~~v~~vI~g~~--~~~~l~en~~a~~~~~~Ls~e~~~~i~~~~~~~~ 359 (367)
T 3lut_A 308 IAWCLRNEGVSSVLLGAS--NAEQLMENIGAIQVLPKLSSSIVHEIDSILGNKP 359 (367)
T ss_dssp HHHHHTSTTEEEEEECCS--SHHHHHHHHTHHHHGGGCCHHHHHHHHHHHCCCC
T ss_pred HHHHHhCCCCcEEecCCC--CHHHHHHHHHhhcccCCCCHHHHHHHHHHHhcCC
Confidence 999999999999999999 99999999999986 899999999999976544
No 8
>1pz1_A GSP69, general stress protein 69; beta-alpha barrel, aldo-keto reductase, TIM barrel, oxidoreductase; HET: NAP; 2.20A {Bacillus subtilis} SCOP: c.1.7.1
Probab=100.00 E-value=6e-50 Score=366.30 Aligned_cols=254 Identities=21% Similarity=0.360 Sum_probs=215.0
Q ss_pred ceeeccccccCCC-----ccHHHhhhc-----CCCcEEEEeccc---CCCC---CCCHHHHHHHHHHHHhhcCCCcccEE
Q 022300 17 PITMGLLKISMAS-----SSIEFVERG-----HQSSWISLTKWV---PPPV---KMTSSIVRESIDVSRRRMDVPCLDML 80 (299)
Q Consensus 17 ~~~~g~~~~~~ag-----~sE~~lg~~-----~R~~i~I~tK~~---~~~~---~~~~~~i~~~ve~SL~~Lg~d~iDl~ 80 (299)
.++.|++.||+|. .||+++|++ .|++++|+||++ +... +.+++.+++++++||++||+||||+|
T Consensus 43 Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~~~R~~~~i~TK~~~~~~~~~~~~~~~~~~i~~~~~~SL~rLg~dyiDl~ 122 (333)
T 1pz1_A 43 ALDQGITLIDTAPAYGFGQSEEIVGKAIKEYMKRDQVILATKTALDWKNNQLFRHANRARIVEEVENSLKRLQTDYIDLY 122 (333)
T ss_dssp HHHTTCCEEECCTTGGGGHHHHHHHHHHHHHTCGGGCEEEEEECEEESSSCEEECCCHHHHHHHHHHHHHHTTSSCBSEE
T ss_pred HHHcCCCeEECccccCCCchHHHHHHHHhcCCCcCeEEEEEeeCccCCCCCCCCCCCHHHHHHHHHHHHHHhCCCceeEE
Confidence 3677999999874 599999987 489999999996 2111 46899999999999999999999999
Q ss_pred EEecCCCCCCcHHHHHHHHHHHHHcCcccEEEecCCCHHHHHHHHHcCCCeeEeeecccccccChhhHHHHHHHHhCCeE
Q 022300 81 QFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILENGIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKL 160 (299)
Q Consensus 81 ~lH~pd~~~~~~~~~~~~L~~l~~~Gkir~iGvs~~~~~~l~~~~~~~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v 160 (299)
++|+|+...+ .+++|++|++|+++||||+||||||+.++++++++. .+|+++|++||++++..+.+++++|+++||++
T Consensus 123 ~lH~p~~~~~-~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~-~~~~~~Q~~~nl~~~~~e~~l~~~~~~~gi~v 200 (333)
T 1pz1_A 123 QVHWPDPLVP-IEETAEVMKELYDAGKIRAIGVSNFSIEQMDTFRAV-APLHTIQPPYNLFEREMEESVLPYAKDNKITT 200 (333)
T ss_dssp EECSCCTTSC-HHHHHHHHHHHHHTTSBSCEEECSCCHHHHHHHHTT-SCCCEECCBCBTTBCGGGGTHHHHHHHTTCEE
T ss_pred EecCCCCCCC-HHHHHHHHHHHHHCCcCCEEEecCCCHHHHHHHHhc-CCcEEEeccccCccCchHHHHHHHHHHcCceE
Confidence 9999998877 899999999999999999999999999999999986 78999999999999988778999999999999
Q ss_pred EEcccccccccCCcccCCCCCCCCCCCCCCCchhHHHHhhhhhcCCchHHHHHHHHHHHHHHHhCC-CHHHHHHHHHHhC
Q 022300 161 ITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASKHGV-SIPVVAVRYILDQ 239 (299)
Q Consensus 161 ~~~~pl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~la~~~~~-s~aq~al~~~l~~ 239 (299)
++|+||++|+|++++..... +...+.+.. ...|.. .......++++.+.++|+++|+ |++|+||+|++++
T Consensus 201 ~a~spL~~G~Ltg~~~~~~~---~~~~~~r~~-~~~~~~-----~~~~~~~~~~~~l~~ia~~~g~~s~aqvaL~w~l~~ 271 (333)
T 1pz1_A 201 LLYGSLCRGLLTGKMTEEYT---FEGDDLRNH-DPKFQK-----PRFKEYLSAVNQLDKLAKTRYGKSVIHLAVRWILDQ 271 (333)
T ss_dssp EEBCTTGGGTTSSCCCTTCC---CCTTCGGGS-CGGGST-----TTHHHHHHHHHHHHHHHHHHHSCCHHHHHHHHHHTS
T ss_pred EEeecccCCccCCCcccccc---CCCcccccc-ccccch-----hhHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHhC
Confidence 99999999999998765311 111111100 000100 0012344667899999999999 9999999999999
Q ss_pred CCCceeeeccCCCCHHHHHHhHhhhcCCCCHHHHHHHHHHHhcC
Q 022300 240 PAVAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKKG 283 (299)
Q Consensus 240 ~~v~~~i~g~~~~~~e~l~enl~a~~~~Lt~e~~~~i~~~~~~~ 283 (299)
+.|+++|+|++ +++||++|+++++++||+++++.|+++....
T Consensus 272 ~~v~~vI~g~~--~~~~l~en~~a~~~~L~~e~~~~l~~~~~~~ 313 (333)
T 1pz1_A 272 PGADIALWGAR--KPGQLEALSEITGWTLNSEDQKDINTILENT 313 (333)
T ss_dssp TTCCEEEEECC--SGGGGTTCTTSSSCCCCHHHHHHHHHHHHHH
T ss_pred CCCeEEEeCCC--CHHHHHHHHHhcCCCCCHHHHHHHHHHHhhc
Confidence 99999999999 9999999999999999999999999998754
No 9
>1lqa_A TAS protein; TIM barrel, structure 2 function project, S2F, structural GE oxidoreductase; HET: NDP; 1.60A {Escherichia coli} SCOP: c.1.7.1
Probab=100.00 E-value=2.3e-49 Score=364.30 Aligned_cols=257 Identities=23% Similarity=0.333 Sum_probs=212.1
Q ss_pred ceeeccccccCC------------CccHHHhhhc-----CCCcEEEEecccCC------C----CCCCHHHHHHHHHHHH
Q 022300 17 PITMGLLKISMA------------SSSIEFVERG-----HQSSWISLTKWVPP------P----VKMTSSIVRESIDVSR 69 (299)
Q Consensus 17 ~~~~g~~~~~~a------------g~sE~~lg~~-----~R~~i~I~tK~~~~------~----~~~~~~~i~~~ve~SL 69 (299)
.++.|++.||+| |.||+++|++ .|++++|+||++.. . .+++++.+++++++||
T Consensus 39 Al~~Gi~~~DTA~~Yg~~~~~~~~G~sE~~lG~al~~~~~R~~~~i~TK~~~~~~~~~~~~~~~~~~~~~~i~~~~~~SL 118 (346)
T 1lqa_A 39 AVAQGINLIDVAEMYPVPPRPETQGLTETYVGNWLAKHGSREKLIIASKVSGPSRNNDKGIRPDQALDRKNIREALHDSL 118 (346)
T ss_dssp HHHTTCCEEECCTTCSSSCCTTTTTHHHHHHHHHHHHHCCGGGCEEEEEECCSCCTTCCCSSTTCCSSHHHHHHHHHHHH
T ss_pred HHHcCCCEEEChhhcCCCccCCCCCccHHHHHHHHhhcCCCceEEEEEeECCCcCCcccccCCCCCCCHHHHHHHHHHHH
Confidence 367788888886 4799999987 38999999999742 1 2378999999999999
Q ss_pred hhcCCCcccEEEEecCC---------------C--CCCcHHHHHHHHHHHHHcCcccEEEecCCCHHHHHHHHHc----C
Q 022300 70 RRMDVPCLDMLQFHWWD---------------Y--SNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN----G 128 (299)
Q Consensus 70 ~~Lg~d~iDl~~lH~pd---------------~--~~~~~~~~~~~L~~l~~~Gkir~iGvs~~~~~~l~~~~~~----~ 128 (299)
++||+||||+|+||||+ . ..+ ++++|++|++|+++||||+||||||+.+++++++.. +
T Consensus 119 ~rL~~dyiDl~~lH~p~~~~~~~~~~~~~~~d~~~~~~-~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~ 197 (346)
T 1lqa_A 119 KRLQTDYLDLYQVHWPQRPTNCFGKLGYSWTDSAPAVS-LLDTLDALAEYQRAGKIRYIGVSNETAFGVMRYLHLADKHD 197 (346)
T ss_dssp HHHTSSCEEEEEECSCSSCCSCTTCCSCCCCSSCCSSC-HHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHHHHHT
T ss_pred HHhCCCceeEEEecCccccccccccccccccccccCCC-HHHHHHHHHHHHHcCCeEEEEecCCCHHHHHHHHHHHHHcC
Confidence 99999999999999993 2 234 789999999999999999999999999888776543 4
Q ss_pred -CCeeEeeecccccccChhhHHHHHHHHhCCeEEEcccccccccCCcccCCCCCCCCCCCCCCCchhHHHHhhhhhcCCc
Q 022300 129 -IPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGW 207 (299)
Q Consensus 129 -~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~~~~pl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (299)
.+|+++|++||++++..+.+++++|+++||++++|+||++|+|++++.... .|.+ .....+.. ...+ ..
T Consensus 198 ~~~~~~~Q~~~~l~~~~~~~~l~~~~~~~gi~v~a~spL~~G~L~g~~~~~~--~p~~------~~~~~~~~-~~~~-~~ 267 (346)
T 1lqa_A 198 LPRIVTIQNPYSLLNRSFEVGLAEVSQYEGVELLAYSCLGFGTLTGKYLNGA--KPAG------ARNTLFSR-FTRY-SG 267 (346)
T ss_dssp CCCCCEEEEECBTTBCTHHHHHHHHHHHHCCEEEEECTTGGGGGGTTTGGGC--CCTT------CHHHHCTT-CCTT-CS
T ss_pred CCCceEEeccCChhhchhHHHHHHHHHHcCCeEEEecchhhhhhcCcccccc--CCCc------chhhcchh-hccc-cc
Confidence 479999999999999887889999999999999999999999999876531 1100 00000000 0011 12
Q ss_pred hHHHHHHHHHHHHHHHhCCCHHHHHHHHHHhCCCCceeeeccCCCCHHHHHHhHhhhcCCCCHHHHHHHHHHHhcCCCC
Q 022300 208 SQFQVLLQTLKRIASKHGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKKGKDL 286 (299)
Q Consensus 208 ~~~~~~~~~l~~la~~~~~s~aq~al~~~l~~~~v~~~i~g~~~~~~e~l~enl~a~~~~Lt~e~~~~i~~~~~~~~~~ 286 (299)
+...++++.+.++|+++|+|++|+||+|+++++.|+++|+|++ +++||++|+++++++||+++++.|+++.+....+
T Consensus 268 ~~~~~~~~~l~~ia~~~g~s~aqvaL~w~l~~~~v~~~I~g~~--~~~~l~enl~a~~~~L~~e~~~~l~~~~~~~~~p 344 (346)
T 1lqa_A 268 EQTQKAVAAYVDIARRHGLDPAQMALAFVRRQPFVASTLLGAT--TMDQLKTNIESLHLELSEDVLAEIEAVHQVYTYP 344 (346)
T ss_dssp HHHHHHHHHHHHHHHHTTCCHHHHHHHHHHTCTTEEEEEECCS--SHHHHHHHHGGGGCCCCHHHHHHHHHHHHHSCSC
T ss_pred HHHHHHHHHHHHHHHHHCcCHHHHHHHHHHhCCCCeEEEeCCC--CHHHHHHHHHhccCCCCHHHHHHHHHHHhhccCC
Confidence 3345667899999999999999999999999999999999999 9999999999999999999999999998765543
No 10
>3v0s_A Perakine reductase; AKR superfamily, oxidoreductase; HET: MLZ M3L MLY ATR; 1.77A {Rauvolfia serpentina} PDB: 3v0u_A 3v0t_A* 3uyi_A*
Probab=100.00 E-value=1.7e-50 Score=370.50 Aligned_cols=251 Identities=20% Similarity=0.309 Sum_probs=207.4
Q ss_pred ceeeccccccCC------CccHHHhhhc----CCCcEEEEecccCCC-------CCCCHHHHHHHHHHHHhhcCCCcccE
Q 022300 17 PITMGLLKISMA------SSSIEFVERG----HQSSWISLTKWVPPP-------VKMTSSIVRESIDVSRRRMDVPCLDM 79 (299)
Q Consensus 17 ~~~~g~~~~~~a------g~sE~~lg~~----~R~~i~I~tK~~~~~-------~~~~~~~i~~~ve~SL~~Lg~d~iDl 79 (299)
.++.|++.||+| |.||+++|++ .|++++|+||++... .+.+++.+++++++||++||+||||+
T Consensus 43 Al~~Gi~~~DTA~~Yg~~G~sE~~lG~al~~~~R~~~~i~TK~~~~~~~~~~~~~~~~~~~i~~~~~~SL~rLg~dyiDl 122 (337)
T 3v0s_A 43 AFNCGITFFDTSDIYGENGSNEELLGKALKQLPREXIQVGTKFGIHEIGFSGVKAXGTPDYVRSCCEASLKRLDVDYIDL 122 (337)
T ss_dssp HHHTTCCEEECCTTSSSTTHHHHHHHHHHTTSCGGGCEEEEEECEEEEETTEEEECCCHHHHHHHHHHHHHHHTCSCEEE
T ss_pred HHHcCCCEEEChhhhCCCCcHHHHHHHHHhhcCCcceEEEeeeccccCCCCcccCCCCHHHHHHHHHHHHHHhCCCCeeE
Confidence 467899999975 3599999987 489999999998632 25689999999999999999999999
Q ss_pred EEEecCCCCCCcHHHHHHHHHHHHHcCcccEEEecCCCHHHHHHHHHcCCCeeEeeecccccccChhhHHHHHHHHhCCe
Q 022300 80 LQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILENGIPVVSNQVQHSVVDMRPQQKMAELCQLTGVK 159 (299)
Q Consensus 80 ~~lH~pd~~~~~~~~~~~~L~~l~~~Gkir~iGvs~~~~~~l~~~~~~~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~ 159 (299)
|++|||+...+ .+++|++|++|+++||||+||||||+.++++++... .+++++|++||++++..+.+++++|+++||+
T Consensus 123 ~~lH~p~~~~~-~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~-~~~~~~Q~~~~~~~~~~e~~l~~~~~~~gi~ 200 (337)
T 3v0s_A 123 FYIHRIDTTVP-IEITMGELXXLVEEGKIXYVGLSEASPDTIRRAHAV-HPVTALQIEYSLWTRDIEDEIVPLCRQLGIG 200 (337)
T ss_dssp EEESSCCTTSC-HHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHH-SCCCEEEEECBTTBCGGGTTHHHHHHHHTCE
T ss_pred EEecCCCCCCC-HHHHHHHHHHHHHCCCeeEEeccCCCHHHHHHHhcc-CCceEEEeeccccccchhHHHHHHHHHcCce
Confidence 99999998887 899999999999999999999999999999999886 6789999999999998877899999999999
Q ss_pred EEEcccccccccCCcccCCCCCCCCCCCCCCCchhHHHHhhhhhcCC--chHHHHHHHHHHHHHHHhCCCHHHHHHHHHH
Q 022300 160 LITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGG--WSQFQVLLQTLKRIASKHGVSIPVVAVRYIL 237 (299)
Q Consensus 160 v~~~~pl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~la~~~~~s~aq~al~~~l 237 (299)
+++|+||++|+|+++..... .+ ..+.+. ...+|.. .+....+.+.+.++|+++|+|++|+||+|++
T Consensus 201 v~a~spL~~G~L~g~~~~~~--~~--~~~~~~--------~~~~~~~~~~~~~~~~~~~l~~ia~~~g~t~aqvaL~w~l 268 (337)
T 3v0s_A 201 IVPYSPIGRGLFWGKAIKES--LP--ENSVLT--------SHPRFVGENLEKNKQIYYRIEALSQKHGCTPVQLALAWVL 268 (337)
T ss_dssp EEEESTTHHHHHHHHHHHC-------------------------------------CHHHHHHHHHTTSCHHHHHHHHHH
T ss_pred EEEeccccCcccCCCCCCCC--CC--Ccchhh--------cccccchhhhhhHHHHHHHHHHHHHHhCCCHHHHHHHHHH
Confidence 99999999999998732211 11 111000 0011111 1112345688999999999999999999999
Q ss_pred hCCCCceeeeccCCCCHHHHHHhHhhhcCCCCHHHHHHHHHHHhcC
Q 022300 238 DQPAVAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKKG 283 (299)
Q Consensus 238 ~~~~v~~~i~g~~~~~~e~l~enl~a~~~~Lt~e~~~~i~~~~~~~ 283 (299)
+++.|+++|+|++ +++||++|+++++++||+++++.|+++++..
T Consensus 269 ~~~~v~~~I~g~~--~~~~l~en~~a~~~~L~~e~~~~l~~~~~~~ 312 (337)
T 3v0s_A 269 HQGEDVVPIPGTT--KIKNLHNNVGALKVXLTKEDLKEISDAVPLD 312 (337)
T ss_dssp TTCTTBCCCCCCS--CHHHHHHHHHGGGCCCCHHHHHHHHHTCC--
T ss_pred hCCCCeEEEcCCC--CHHHHHHHHHHhccCCCHHHHHHHHHhhccc
Confidence 9999999999999 9999999999999999999999999987554
No 11
>2bp1_A Aflatoxin B1 aldehyde reductase member 2; oxidoreductase, aldo-keto reductase family 7, SSA reductase, barrel; HET: FLC NDP; 2.4A {Homo sapiens}
Probab=100.00 E-value=4.6e-49 Score=363.91 Aligned_cols=260 Identities=16% Similarity=0.198 Sum_probs=211.6
Q ss_pred eeeccccccCC-----CccHHHhhhcC------CCcEEEEecccCC-CCCCCHHHHHHHHHHHHhhcCCCcccEEEEecC
Q 022300 18 ITMGLLKISMA-----SSSIEFVERGH------QSSWISLTKWVPP-PVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWW 85 (299)
Q Consensus 18 ~~~g~~~~~~a-----g~sE~~lg~~~------R~~i~I~tK~~~~-~~~~~~~~i~~~ve~SL~~Lg~d~iDl~~lH~p 85 (299)
++.|++.||+| |.||+++|+++ |++++|+||+++. ..+++++.+++++++||++||+||||+|++|+|
T Consensus 65 l~~Gin~~DTA~~Yg~G~sE~~lG~al~~~~~~r~~v~I~TK~~~~~~~~~~~~~i~~~~e~SL~rLg~dyiDl~~lH~p 144 (360)
T 2bp1_A 65 LERGHTELDTAFMYSDGQSETILGGLGLGLGGGDCRVKIATKANPWDGKSLKPDSVRSQLETSLKRLQCPQVDLFYLHAP 144 (360)
T ss_dssp HHTTCCEEECCTTGGGGHHHHHHHTSCCCTTSTTCCCEEEEEECCCTTCCSSHHHHHHHHHHHHHHHTCSCEEEEEECSC
T ss_pred HHcCCCEEECccccCCCChHHHHHHHHhhccCCCCeEEEEeeecCCCCCCCCHHHHHHHHHHHHHHhCCCeEeEEEecCC
Confidence 34566667765 57999999985 5689999999753 125789999999999999999999999999999
Q ss_pred CCCCCcHHHHHHHHHHHHHcCcccEEEecCCCHHHHHHHHHc----C-CCeeEeeecccccccChhhHHHHHHHHhCCeE
Q 022300 86 DYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN----G-IPVVSNQVQHSVVDMRPQQKMAELCQLTGVKL 160 (299)
Q Consensus 86 d~~~~~~~~~~~~L~~l~~~Gkir~iGvs~~~~~~l~~~~~~----~-~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v 160 (299)
+...+ ++++|++|++|+++||||+||||||+.+++.++... + ++|+++|++||++++..+.+++++|+++||++
T Consensus 145 ~~~~~-~~e~~~aL~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~g~~~~~~~Q~~yn~~~~~~e~~l~~~~~~~gi~v 223 (360)
T 2bp1_A 145 DHGTP-VEETLHACQRLHQEGKFVELGLSNYASWEVAEICTLCKSNGWILPTVYQGMYNATTRQVETELFPCLRHFGLRF 223 (360)
T ss_dssp CTTSC-HHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHHHHHTCCCEEEEEEECBTTBCGGGTTHHHHHHHHTCEE
T ss_pred CCCCC-HHHHHHHHHHHHHCCCccEEEEeCCCHHHHHHHHHHHHHcCCCCceEEeeccchhhccchhhHHHHHHHcCCeE
Confidence 98877 899999999999999999999999999999888764 3 68999999999999887778999999999999
Q ss_pred EEcccccccccCCcccCCCCCCCCCCCCCCCc-hhHHHHhhhhhcCCchHHHHHHHHHHHHHHH----hCCCHHHHHHHH
Q 022300 161 ITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTP-SLQKYKRMVDAWGGWSQFQVLLQTLKRIASK----HGVSIPVVAVRY 235 (299)
Q Consensus 161 ~~~~pl~~G~L~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~la~~----~~~s~aq~al~~ 235 (299)
++|+||++|+|++++.....+......+.... ....|. .++.... ..+..+.+.++|++ +|+|++|+||+|
T Consensus 224 ~a~spL~~G~Ltg~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-~~~~~~~l~~ia~~~~~~~g~s~aqvaL~w 299 (360)
T 2bp1_A 224 YAYNPLAGGLLTGKYKYEDKDGKQPVGRFFGNSWAETYR---NRFWKEH-HFEAIALVEKALQAAYGASAPSVTSAALRW 299 (360)
T ss_dssp EEECTTGGGGGGTCCCGGGGTTTCCSBTTBSSTTHHHHH---HHHCCHH-HHHHHHHHHHHHHHHHGGGCCCHHHHHHHH
T ss_pred EEecccccCcccCCccCcCcccccccccccccccchhhh---hcccchh-HHHHHHHHHHHHHHhhhhcCCCHHHHHHHH
Confidence 99999999999998764311000000111000 111121 1122222 23457889999999 999999999999
Q ss_pred HHhCCCC-----ceeeeccCCCCHHHHHHhHhhhcC-CCCHHHHHHHHHHHhcCC
Q 022300 236 ILDQPAV-----AGSMIGVRLGLAEHIQDTNAIFML-SLDEDDVNSIQEVTKKGK 284 (299)
Q Consensus 236 ~l~~~~v-----~~~i~g~~~~~~e~l~enl~a~~~-~Lt~e~~~~i~~~~~~~~ 284 (299)
+++++.| .++|+|++ +++||++|+++++. +||+++++.|+++.+..+
T Consensus 300 ~l~~~~v~~~~g~~vI~G~~--~~~~l~enl~a~~~~~L~~e~~~~l~~~~~~~~ 352 (360)
T 2bp1_A 300 MYHHSQLQGAHGDAVILGMS--SLEQLEQNLAATEEGPLEPAVVDAFNQAWHLVA 352 (360)
T ss_dssp HHHHSSCCGGGTCEEEECCS--SHHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHG
T ss_pred HHhCCcccccCCCeEEECCC--CHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcc
Confidence 9999998 78999999 99999999999987 899999999999977653
No 12
>1ur3_M Hypothetical oxidoreductase YDHF; NADP binding, aldo-keto reductase; 2.57A {Escherichia coli} SCOP: c.1.7.1 PDB: 1og6_A*
Probab=100.00 E-value=1e-48 Score=355.86 Aligned_cols=231 Identities=17% Similarity=0.194 Sum_probs=205.2
Q ss_pred eeeccccccCCC-----ccHHHhhhc------CCCcEEEEecccCCC----------CCCCHHHHHHHHHHHHhhcCCCc
Q 022300 18 ITMGLLKISMAS-----SSIEFVERG------HQSSWISLTKWVPPP----------VKMTSSIVRESIDVSRRRMDVPC 76 (299)
Q Consensus 18 ~~~g~~~~~~ag-----~sE~~lg~~------~R~~i~I~tK~~~~~----------~~~~~~~i~~~ve~SL~~Lg~d~ 76 (299)
++.|++.||+|. .||+++|++ .|++++|+||++... .+.+++.+++++++||++||+||
T Consensus 63 l~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~~~~R~~v~I~TK~~~~~~~~~~~~~~~~~~~~~~i~~~~e~SL~rLg~dy 142 (319)
T 1ur3_M 63 LDLGVTTVDHADIYGGYQCEAAFGEALKLAPHLRERMEIVSKCGIATTAREENVIGHYITDRDHIIKSAEQSLINLATDH 142 (319)
T ss_dssp HHHTCCEEECCSSTTTTTHHHHHHHHHHHCGGGTTTCEEEEEECEECTTSTTCSSCEECCCHHHHHHHHHHHHHHHTCSC
T ss_pred HHcCCCeEEcccccCCCcHHHHHHHHHHhCCCCCCeEEEEEeeccCCCCCcccccccCCCCHHHHHHHHHHHHHHhCCCC
Confidence 567888888763 699999987 389999999997421 25789999999999999999999
Q ss_pred ccEEEEecCCCCCCcHHHHHHHHHHHHHcCcccEEEecCCCHHHHHHHHHc-CCCeeEeeecccccccCh-hhHHHHHHH
Q 022300 77 LDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-GIPVVSNQVQHSVVDMRP-QQKMAELCQ 154 (299)
Q Consensus 77 iDl~~lH~pd~~~~~~~~~~~~L~~l~~~Gkir~iGvs~~~~~~l~~~~~~-~~~~~~~q~~~n~~~~~~-~~~~~~~~~ 154 (299)
||+|++|||+...+ .+++|++|++|+++||||+||||||+.++++++.+. +.+|+++|++||++++.. +.+++++|+
T Consensus 143 iDl~~lH~p~~~~~-~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~~~~~~ll~~~~ 221 (319)
T 1ur3_M 143 LDLLLIHRPDPLMD-ADEVADAFKHLHQSGKVRHFGVSNFTPAQFALLQSRLPFTLATNQVEISPVHQPLLLDGTLDQLQ 221 (319)
T ss_dssp BSEEEECSCCTTCC-HHHHHHHHHHHHHTTSBCCEEEESCCHHHHHHHHTTCSSCCCCEEEECBTTBCGGGTSSHHHHHH
T ss_pred eeEEEecCCCCCCC-HHHHHHHHHHHHHCCCccEEEecCCCHHHHHHHHHhcCCCcEEEEccCchhhCchhhHHHHHHHH
Confidence 99999999998777 899999999999999999999999999999998876 568999999999999875 456999999
Q ss_pred HhCCeEEEcccccccccCCcccCCCCCCCCCCCCCCCchhHHHHhhhhhcCCchHHHHHHHHHHHHHHHhCCCH-HHHHH
Q 022300 155 LTGVKLITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASKHGVSI-PVVAV 233 (299)
Q Consensus 155 ~~gi~v~~~~pl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~la~~~~~s~-aq~al 233 (299)
++||++++|+||++|.|.. . +....+.+.+.++|+++|+|+ +|+||
T Consensus 222 ~~gi~v~a~spL~~G~L~~---~------------------------------~~~~~~~~~l~~ia~~~g~t~~aqvaL 268 (319)
T 1ur3_M 222 QLRVRPMAWSCLGGGRLFN---D------------------------------DYFQPLRDELAVVAEELNAGSIEQVVN 268 (319)
T ss_dssp HHTCCCEEECCCTTTCSSS---C------------------------------GGGHHHHHHHHHHHHHTTCSCHHHHHH
T ss_pred HcCCeEEEeccccCccccC---C------------------------------chhHHHHHHHHHHHHHcCCChHHHHHH
Confidence 9999999999999998732 0 001234688999999999999 99999
Q ss_pred HHHHhCCCCceeeeccCCCCHHHHHHhHhhhcCCCCHHHHHHHHHHHhcCC
Q 022300 234 RYILDQPAVAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKKGK 284 (299)
Q Consensus 234 ~~~l~~~~v~~~i~g~~~~~~e~l~enl~a~~~~Lt~e~~~~i~~~~~~~~ 284 (299)
+|++++|.++++|+|++ +++||++|+++++++||+++++.|+++.++.+
T Consensus 269 ~w~l~~~~~~~~I~G~~--~~~~l~en~~a~~~~Ls~ee~~~l~~~~~~~~ 317 (319)
T 1ur3_M 269 AWVLRLPSQPLPIIGSG--KIERVRAAVEAETLKMTRQQWFRIRKAALGYD 317 (319)
T ss_dssp HHHHTSTTCCEEEECCS--CHHHHHHHHGGGGCCCCHHHHHHHHHHHHSSC
T ss_pred HHHHhCCCCeEEEeCCC--CHHHHHHHHHhccCCCCHHHHHHHHHHhcCCC
Confidence 99999999999999999 99999999999999999999999999876543
No 13
>1ynp_A Oxidoreductase, AKR11C1; aldo-keto reductase, NADPH; HET: SUC; 1.25A {Bacillus halodurans} PDB: 1ynq_A*
Probab=100.00 E-value=1.4e-48 Score=354.72 Aligned_cols=236 Identities=21% Similarity=0.317 Sum_probs=199.8
Q ss_pred eeeccccccCC-----CccHHHhhhcC---CCcEEEEecccCCC--------CCCCHHHHHHHHHHHHhhcCCCcccEEE
Q 022300 18 ITMGLLKISMA-----SSSIEFVERGH---QSSWISLTKWVPPP--------VKMTSSIVRESIDVSRRRMDVPCLDMLQ 81 (299)
Q Consensus 18 ~~~g~~~~~~a-----g~sE~~lg~~~---R~~i~I~tK~~~~~--------~~~~~~~i~~~ve~SL~~Lg~d~iDl~~ 81 (299)
++.|++.||+| |.||+++|+++ |++++|+||++... .+.+++.+++++++||++||+||||+|+
T Consensus 58 l~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~R~~v~I~TK~~~~~~~~~~~~~~~~~~~~v~~~~e~SL~rL~~dyiDl~l 137 (317)
T 1ynp_A 58 LELGINYLDTADLYNQGLNEQFVGKALKGRRQDIILATKVGNRFEQGKEGWWWDPSKAYIKEAVKDSLRRLQTDYIDLYQ 137 (317)
T ss_dssp HHTTCCEEECSCBTTBCCCHHHHHHHHTTCGGGCEEEEEC---------------CHHHHHHHHHHHHHHHTCSCEEEEE
T ss_pred HHcCCCeEECccccCCCchHHHHHHHHhcCCCeEEEEeeeCCCcCCCCccccCCCCHHHHHHHHHHHHHHHCCCcEeEEE
Confidence 56788888886 45999999984 89999999997531 3568999999999999999999999999
Q ss_pred EecCCCCCCcHHHHHHHHHHHHHcCcccEEEecCCCHHHHHHHHHcCCCeeEeeecccccccChhhHHHHHHHHhCCeEE
Q 022300 82 FHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILENGIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLI 161 (299)
Q Consensus 82 lH~pd~~~~~~~~~~~~L~~l~~~Gkir~iGvs~~~~~~l~~~~~~~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~ 161 (299)
+|||+...+ .+++|++|++|+++||||+||||||+.++++++++. .+++++|++||++++..+. ++++|+++||+++
T Consensus 138 lH~p~~~~~-~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~-~~~~~~Q~~~nl~~~~~e~-l~~~~~~~gI~v~ 214 (317)
T 1ynp_A 138 LHGGTIDDP-IDETIEAFEELKQEGVIRYYGISSIRPNVIKEYLKR-SNIVSIMMQYSILDRRPEE-WFPLIQEHGVSVV 214 (317)
T ss_dssp ECSCCTTSC-HHHHHHHHHHHHHHTSEEEEEEECCCHHHHHHHHHH-SCCCEEEEECBTTBCGGGG-GHHHHHHTTCEEE
T ss_pred ecCCCCCCC-hHHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHhc-CCCEEEeccCCchhCCHHH-HHHHHHHcCCeEE
Confidence 999998777 899999999999999999999999999999999887 4689999999999988765 9999999999999
Q ss_pred EcccccccccCCcccCCCCCCCCCCCCCCCchhHHHHhhhhhcCCchHHHHHHHHHHHHHHHhCCCHHHHHHHHHHhCCC
Q 022300 162 TYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASKHGVSIPVVAVRYILDQPA 241 (299)
Q Consensus 162 ~~~pl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~la~~~~~s~aq~al~~~l~~~~ 241 (299)
+|+||++|.|+++ ... .. .. +... ....+.+.+.++|+ |+|++|+||+|+++++.
T Consensus 215 a~spL~~G~L~~~-~~~--------~~-~~------------~~~~-~~~~~~~~l~~ia~--g~s~aqvaL~w~l~~~~ 269 (317)
T 1ynp_A 215 VRGPVARGLLSRR-PLP--------EG-EG------------YLNY-RYDELKLLRESLPT--DRPLHELALQYCLAHDV 269 (317)
T ss_dssp EECTTGGGTTSSS-CCC--------TT-CC------------BTTB-CHHHHHHHHHHSCS--SSCHHHHHHHHHHTSTT
T ss_pred EecCccCcccCCC-CCc--------cc-cc------------cccc-cHHHHHHHHHHHHc--CCCHHHHHHHHHHhCCC
Confidence 9999999999876 210 00 00 0000 11234578888888 99999999999999999
Q ss_pred CceeeeccCCCCHHHHHHhHhhhc-CCCCHHHHHHHHHHHhcC
Q 022300 242 VAGSMIGVRLGLAEHIQDTNAIFM-LSLDEDDVNSIQEVTKKG 283 (299)
Q Consensus 242 v~~~i~g~~~~~~e~l~enl~a~~-~~Lt~e~~~~i~~~~~~~ 283 (299)
|.++|+|++ +++||++|+++++ ++||+++++.|+++.+..
T Consensus 270 v~~vI~g~~--~~~~l~en~~a~~~~~Ls~ee~~~l~~~~~~~ 310 (317)
T 1ynp_A 270 VATVAAGAS--SIDQVKANVQAVEATPLTAEERQHIQKLAKAA 310 (317)
T ss_dssp EEEEECCCS--SHHHHHHHHHHHTSCCCCHHHHHHHHHHSCCC
T ss_pred CeEEEeCCC--CHHHHHHHHHhccCCCCCHHHHHHHHHHHhhh
Confidence 999999999 9999999999999 899999999999986543
No 14
>3up8_A Putative 2,5-diketo-D-gluconic acid reductase B; nysgrc, PSI-biology, structural genomics; 1.96A {Sinorhizobium meliloti}
Probab=100.00 E-value=3.2e-48 Score=348.92 Aligned_cols=221 Identities=19% Similarity=0.347 Sum_probs=199.6
Q ss_pred ceeeccccccCCCc--cHHHhhhc------CCCcEEEEecccCCCCCCCHHHHHHHHHHHHhhcCCCcccEEEEecCCCC
Q 022300 17 PITMGLLKISMASS--SIEFVERG------HQSSWISLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYS 88 (299)
Q Consensus 17 ~~~~g~~~~~~ag~--sE~~lg~~------~R~~i~I~tK~~~~~~~~~~~~i~~~ve~SL~~Lg~d~iDl~~lH~pd~~ 88 (299)
.++.|++.||+|.. +|+.+|++ .|+++||+||+++ .+.+++.+++++++||++||+||||+|++|||+..
T Consensus 56 Al~~Gi~~~DTA~~Yg~E~~lG~al~~~~~~R~~v~I~TK~~~--~~~~~~~i~~~~e~SL~rLg~dyiDl~llH~p~~~ 133 (298)
T 3up8_A 56 ALKLGFRHVDTAQIYGNEAEVGEAIQKSGIPRADVFLTTKVWV--DNYRHDAFIASVDESLRKLRTDHVDLLLLHWPGSD 133 (298)
T ss_dssp HHHHTCCEEECCTTTTCHHHHHHHHHHHTCCGGGCEEEEEECG--GGCSHHHHHHHHHHHHHHHTSSCEEEEEESCSCCS
T ss_pred HHHcCCCEEECCCcccCHHHHHHHHHHcCCChHHEEEEeccCC--CCCCHHHHHHHHHHHHHHhCCCcEEEEEEccCCCC
Confidence 35678888887642 89999986 4999999999986 46789999999999999999999999999999988
Q ss_pred CCcHHHHHHHHHHHHHcCcccEEEecCCCHHHHHHHHHc-CCCeeEeeecccccccChhhHHHHHHHHhCCeEEEccccc
Q 022300 89 NPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-GIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYGTVM 167 (299)
Q Consensus 89 ~~~~~~~~~~L~~l~~~Gkir~iGvs~~~~~~l~~~~~~-~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~~~~pl~ 167 (299)
.+ .+++|++|++|+++||||+||||||+.++++++++. +++|+++|++||++.+. .+++++|+++||++++|+||+
T Consensus 134 ~~-~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~--~~l~~~~~~~gi~v~a~spL~ 210 (298)
T 3up8_A 134 VP-MAERIGALNEVRNAGKVRHIGISNFNTTQMEEAARLSDAPIATNQVEYHPYLDQ--TKVLQTARRLGMSLTSYYAMA 210 (298)
T ss_dssp SC-HHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHCSSCEEEEEEECBTTBCC--HHHHHHHHHHTCEEEEECTTG
T ss_pred CC-HHHHHHHHHHHHHcCCccEEEEcCCCHHHHHHHHHhCCCCceEEEEeccccccc--HHHHHHHHHCCCEEEEECCCc
Confidence 76 899999999999999999999999999999999887 67899999999998764 579999999999999999999
Q ss_pred ccccCCcccCCCCCCCCCCCCCCCchhHHHHhhhhhcCCchHHHHHHHHHHHHHHHhCCCHHHHHHHHHHhCCCCceeee
Q 022300 168 GGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASKHGVSIPVVAVRYILDQPAVAGSMI 247 (299)
Q Consensus 168 ~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~la~~~~~s~aq~al~~~l~~~~v~~~i~ 247 (299)
+|.|.. .+.+.++|+++|+|++|+||+|++++|+|+ +|+
T Consensus 211 ~G~l~~----------------------------------------~~~l~~ia~~~g~s~aqvaL~w~l~~p~v~-~I~ 249 (298)
T 3up8_A 211 NGKVPA----------------------------------------DPLLTEIGGRHGKTAAQVALRWLVQQQDVI-VLS 249 (298)
T ss_dssp GGHHHH----------------------------------------CHHHHHHHHHHTCCHHHHHHHHHHTSTTEE-EEE
T ss_pred CCcccc----------------------------------------cchHHHHHHHcCCCHHHHHHHHHHHCCCcE-EEE
Confidence 996521 167899999999999999999999998886 799
Q ss_pred ccCCCCHHHHHHhHhhhcCCCCHHHHHHHHHHHhcCCC
Q 022300 248 GVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKKGKD 285 (299)
Q Consensus 248 g~~~~~~e~l~enl~a~~~~Lt~e~~~~i~~~~~~~~~ 285 (299)
|++ +++||++|+++++++||++|++.|+++.+++.+
T Consensus 250 g~~--~~~~l~en~~a~~~~L~~ee~~~l~~l~~~~~r 285 (298)
T 3up8_A 250 KTA--TEARLKENFAIFDFALTREEMAAVRELARPNGR 285 (298)
T ss_dssp CCC--SHHHHHHHHCCSSCCCCHHHHHHHHTTCCTTCC
T ss_pred CCC--CHHHHHHHHHhCCCCCCHHHHHHHHHHhccCCc
Confidence 999 999999999999999999999999998555443
No 15
>4f40_A Prostaglandin F2-alpha synthase/D-arabinose dehyd; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: CIT; 1.60A {Leishmania major} PDB: 4g5d_A*
Probab=100.00 E-value=1.9e-47 Score=342.94 Aligned_cols=217 Identities=21% Similarity=0.316 Sum_probs=193.1
Q ss_pred ceeeccccccCCCc--cHHHhhhc------CCCcEEEEecccCCCCCCCHHHHHHHHHHHHhhcCCCcccEEEEecCCCC
Q 022300 17 PITMGLLKISMASS--SIEFVERG------HQSSWISLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYS 88 (299)
Q Consensus 17 ~~~~g~~~~~~ag~--sE~~lg~~------~R~~i~I~tK~~~~~~~~~~~~i~~~ve~SL~~Lg~d~iDl~~lH~pd~~ 88 (299)
.++.|++.||+|.. +|+.+|++ .|+++||+||+++ ...+++.+++++++||++||+||||+|++|||+..
T Consensus 44 Al~~G~~~~DTA~~Yg~E~~vG~al~~~~~~R~~~~I~TK~~~--~~~~~~~i~~~~~~SL~rLg~dyiDl~llH~p~~~ 121 (288)
T 4f40_A 44 ALCAGYRHIDTAAIYKNEESVGAGLRASGVPREDVFITTKLWN--TEQGYESTLAAFEESRQKLGVDYIDLYLIHWPRGK 121 (288)
T ss_dssp HHHTTCCEEECCGGGTCHHHHHHHHHHHTCCGGGCEEEEEECG--GGCSHHHHHHHHHHHHHHHTCSCEEEEEECCCCCH
T ss_pred HHHcCCCeEECcccccCHHHHHHHHHhcCCChhhEEEEEecCC--CcCCHHHHHHHHHHHHHHhCCCcEEEEEEecCCCC
Confidence 36778888887652 89999986 4899999999986 45679999999999999999999999999999864
Q ss_pred C------CcHHHHHHHHHHHHHcCcccEEEecCCCHHHHHHHHHc-CCCeeEeeecccccccChhhHHHHHHHHhCCeEE
Q 022300 89 N------PGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-GIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLI 161 (299)
Q Consensus 89 ~------~~~~~~~~~L~~l~~~Gkir~iGvs~~~~~~l~~~~~~-~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~ 161 (299)
. ....++|++|++|+++||||+||||||+.++++++++. .++++++|++||++++. .+++++|+++||+++
T Consensus 122 ~~~~~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~--~~l~~~~~~~gi~v~ 199 (288)
T 4f40_A 122 DILSKEGKKYLDSWRAFEQLYKEKKVRAIGVSNFHIHHLEDVLAMCTVTPMVNQVELHPLNNQ--ADLRAFCDAKQIKVE 199 (288)
T ss_dssp HHHHHHCCHHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHTTCSSCCCEEEEECBTTBCC--HHHHHHHHHTTCEEE
T ss_pred cccccccccHHHHHHHHHHHHHcCCccEEEeccCCHHHHHHHHHhCCCCCeEEeccCccccCC--HHHHHHHHHCCCEEE
Confidence 2 23789999999999999999999999999999999887 57899999999998876 479999999999999
Q ss_pred EcccccccccCCcccCCCCCCCCCCCCCCCchhHHHHhhhhhcCCchHHHHHHHHHHHHHHHhCCCHHHHHHHHHHhCCC
Q 022300 162 TYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASKHGVSIPVVAVRYILDQPA 241 (299)
Q Consensus 162 ~~~pl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~la~~~~~s~aq~al~~~l~~~~ 241 (299)
+|+||++|.|.+ .+.+.++|+++|+|++|+||+|+++++
T Consensus 200 a~spl~~G~l~~----------------------------------------~~~l~~ia~~~g~t~aqvaL~w~l~~~- 238 (288)
T 4f40_A 200 AWSPLGQGKLLS----------------------------------------NPILSAIGAKYNKTAAQVILRWNIQKN- 238 (288)
T ss_dssp EESTTC--CGGG----------------------------------------CHHHHHHHHHHTCCHHHHHHHHHHHTT-
T ss_pred EecCCCCCcccc----------------------------------------cHHHHHHHHHhCCCHHHHHHHHHHhCC-
Confidence 999999997743 167899999999999999999999999
Q ss_pred CceeeeccCCCCHHHHHHhHhhhcCCCCHHHHHHHHHHHh
Q 022300 242 VAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTK 281 (299)
Q Consensus 242 v~~~i~g~~~~~~e~l~enl~a~~~~Lt~e~~~~i~~~~~ 281 (299)
.++|+|++ +++||++|+++++++||++|++.|+++.+
T Consensus 239 -~~~i~g~~--~~~~l~en~~~~~~~L~~ee~~~i~~l~~ 275 (288)
T 4f40_A 239 -LITIPKSV--HRERIEENADIFDFELGAEDVMSIDALNT 275 (288)
T ss_dssp -CEECCBCS--SHHHHHHHHCCSSCCCCHHHHHHHHTTCC
T ss_pred -CeEeeCCC--CHHHHHHHhhhcCCCCCHHHHHHHHhhcc
Confidence 56899999 99999999999999999999999999853
No 16
>3f7j_A YVGN protein; aldo-keto reductase, oxidoreductase; 1.70A {Bacillus subtilis} PDB: 3d3f_A*
Probab=100.00 E-value=2.5e-47 Score=340.11 Aligned_cols=216 Identities=24% Similarity=0.379 Sum_probs=194.9
Q ss_pred ceeeccccccCCCc--cHHHhhhc------CCCcEEEEecccCCCCCCCHHHHHHHHHHHHhhcCCCcccEEEEecCCCC
Q 022300 17 PITMGLLKISMASS--SIEFVERG------HQSSWISLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYS 88 (299)
Q Consensus 17 ~~~~g~~~~~~ag~--sE~~lg~~------~R~~i~I~tK~~~~~~~~~~~~i~~~ve~SL~~Lg~d~iDl~~lH~pd~~ 88 (299)
.++.|++.||+|.. +|+.+|++ .|++++|+||+++ .+.+++.+++++++||++||+||||+|++|||+..
T Consensus 40 Al~~G~~~~DTA~~Yg~E~~lG~al~~~~~~R~~~~i~TK~~~--~~~~~~~v~~~~~~SL~rLg~dyiDl~~lH~p~~~ 117 (276)
T 3f7j_A 40 AIKNGYRSIDTAAIYKNEEGVGIGIKESGVAREELFITSKVWN--EDQGYETTLAAFEKSLERLQLDYLDLYLIHWPGKD 117 (276)
T ss_dssp HHHTTCCEEECCGGGSCHHHHHHHHHHHCSCGGGCEEEEEECG--GGCSHHHHHHHHHHHHHHHTCSCEEEEEESCCCSS
T ss_pred HHHcCCCEEECcCcccCHHHHHHHHhhcCCCcccEEEEEeeCC--CCCCHHHHHHHHHHHHHHhCCCeeEEEEEecCCCC
Confidence 46778888888752 79999986 4899999999976 35689999999999999999999999999999765
Q ss_pred CCcHHHHHHHHHHHHHcCcccEEEecCCCHHHHHHHHHc-CCCeeEeeecccccccChhhHHHHHHHHhCCeEEEccccc
Q 022300 89 NPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-GIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYGTVM 167 (299)
Q Consensus 89 ~~~~~~~~~~L~~l~~~Gkir~iGvs~~~~~~l~~~~~~-~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~~~~pl~ 167 (299)
. .+++|++|++|+++||||+||||||+.++++++++. ++++.++|++||++.+. .+++++|+++||++++|+||+
T Consensus 118 ~--~~~~~~~l~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~--~~l~~~~~~~gi~v~a~spl~ 193 (276)
T 3f7j_A 118 K--YKDTWRALEKLYKDGKIRAIGVSNFQVHHLEELLKDAEIKPMVNQVEFHPRLTQ--KELRDYCKGQGIQLEAWSPLM 193 (276)
T ss_dssp S--HHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHCSSCCSEEEEECBTTBCC--HHHHHHHHHHTCEEEEESTTG
T ss_pred c--HHHHHHHHHHHHHcCCccEEEeccCCHHHHHHHHHhcCCCceeeeeeeccccCC--HHHHHHHHHCCCEEEEecCCC
Confidence 4 789999999999999999999999999999999886 67899999999998764 579999999999999999999
Q ss_pred ccccCCcccCCCCCCCCCCCCCCCchhHHHHhhhhhcCCchHHHHHHHHHHHHHHHhCCCHHHHHHHHHHhCCCCceeee
Q 022300 168 GGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASKHGVSIPVVAVRYILDQPAVAGSMI 247 (299)
Q Consensus 168 ~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~la~~~~~s~aq~al~~~l~~~~v~~~i~ 247 (299)
+|.|.. .+.+.++|+++|+|++|+||+|+++++.| +|+
T Consensus 194 ~G~l~~----------------------------------------~~~l~~ia~~~g~t~aqval~w~l~~~~v--~i~ 231 (276)
T 3f7j_A 194 QGQLLD----------------------------------------NEVLTQIAEKHNKSVAQVILRWDLQHGVV--TIP 231 (276)
T ss_dssp GGTTTT----------------------------------------CHHHHHHHHHHTCCHHHHHHHHHHHTTCE--ECC
T ss_pred CCccCC----------------------------------------CHHHHHHHHHhCCCHHHHHHHHHHhCCCE--Eee
Confidence 997632 16789999999999999999999999965 799
Q ss_pred ccCCCCHHHHHHhHhhhcCCCCHHHHHHHHHHHhc
Q 022300 248 GVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKK 282 (299)
Q Consensus 248 g~~~~~~e~l~enl~a~~~~Lt~e~~~~i~~~~~~ 282 (299)
|++ +++||++|+++++++||+++++.|+++.+.
T Consensus 232 g~~--~~~~l~en~~a~~~~L~~e~~~~l~~l~~~ 264 (276)
T 3f7j_A 232 KSI--KEHRIIENADIFDFELSQEDMDKIDALNKD 264 (276)
T ss_dssp BCC--SHHHHHHHTCCSSCCCCHHHHHHHHTTCCC
T ss_pred CCC--CHHHHHHHHhhCCCCCCHHHHHHHHhhccC
Confidence 999 999999999999999999999999998543
No 17
>1hw6_A 2,5-diketo-D-gluconic acid reductase; aldo-keto reductase, TIM barrel, oxidoreductase; 1.90A {Corynebacterium SP} SCOP: c.1.7.1 PDB: 1a80_A* 1m9h_A*
Probab=100.00 E-value=2.5e-47 Score=340.46 Aligned_cols=219 Identities=16% Similarity=0.264 Sum_probs=190.0
Q ss_pred eeeccccccCCCc--cHHHhhhc------CCCcEEEEecccCCCCCCCHHHHHHHHHHHHhhcCCCcccEEEEecCCCCC
Q 022300 18 ITMGLLKISMASS--SIEFVERG------HQSSWISLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSN 89 (299)
Q Consensus 18 ~~~g~~~~~~ag~--sE~~lg~~------~R~~i~I~tK~~~~~~~~~~~~i~~~ve~SL~~Lg~d~iDl~~lH~pd~~~ 89 (299)
++.|++.||+|.. +|+.+|++ .|++++|+||+++ .+.+++.+++++++||++||+||||+|++|||+...
T Consensus 37 l~~G~~~iDTA~~Yg~E~~vG~al~~~~~~R~~~~i~TK~~~--~~~~~~~v~~~~~~SL~rLg~dyiDl~llH~p~~~~ 114 (278)
T 1hw6_A 37 LEVGYRHIDTAAIYGNEEGVGAAIAASGIARDDLFITTKLWN--DRHDGDEPAAAIAESLAKLALDQVDLYLVHWPTPAA 114 (278)
T ss_dssp HHHTCCEEECGGGTTCCHHHHHHHHHHCCCGGGCEEEEEECC--C-----CHHHHHHHHHHHHTCSCEEEEEECCCCTTC
T ss_pred HHcCCCEEECcccccCHHHHHHHHHHcCCChhhEEEEEeeCC--CCCCHHHHHHHHHHHHHHhCCCCEEEEEEcCCCCCC
Confidence 6678899998753 79999987 4899999999976 456789999999999999999999999999998743
Q ss_pred CcHHHHHHHHHHHHHcCcccEEEecCCCHHHHHHHHHc-CCCeeEeeecccccccChhhHHHHHHHHhCCeEEEcccccc
Q 022300 90 PGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-GIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYGTVMG 168 (299)
Q Consensus 90 ~~~~~~~~~L~~l~~~Gkir~iGvs~~~~~~l~~~~~~-~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~~~~pl~~ 168 (299)
....++|++|++|+++||||+||||||+.++++++++. +++|+++|++||++++. .+++++|+++||++++|+||++
T Consensus 115 ~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~p~~~Q~~~~~~~~~--~~l~~~~~~~gi~v~a~spl~~ 192 (278)
T 1hw6_A 115 DNYVHAWEKMIELRAAGLTRSIGVSNHLVPHLERIVAATGVVPAVNQIELHPAYQQ--REITDWAAAHDVKIESWGPLGQ 192 (278)
T ss_dssp SSHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHHSCCCSEEEEECBTTBCC--HHHHHHHHHTTCEEEEESTTGG
T ss_pred CCHHHHHHHHHHHHHcCCccEEEecCCCHHHHHHHHHhcCCCceeEEEEeCcccCC--HHHHHHHHHcCCEEEEeccccC
Confidence 33899999999999999999999999999999999887 77889999999998876 4799999999999999999999
Q ss_pred cccCCcccCCCCCCCCCCCCCCCchhHHHHhhhhhcCCchHHHHHHHHHHHHHHHhCCCHHHHHHHHHHhCCCCceeeec
Q 022300 169 GLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASKHGVSIPVVAVRYILDQPAVAGSMIG 248 (299)
Q Consensus 169 G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~la~~~~~s~aq~al~~~l~~~~v~~~i~g 248 (299)
|. ++... .+.+.++|+++|+|++|+||+|+++++ | ++|+|
T Consensus 193 G~--~~~~~------------------------------------~~~l~~ia~~~g~s~aqvaL~w~l~~~-v-~~I~g 232 (278)
T 1hw6_A 193 GK--YDLFG------------------------------------AEPVTAAAAAHGKTPAQAVLRWHLQKG-F-VVFPK 232 (278)
T ss_dssp GS--SCCTT------------------------------------SHHHHHHHHHHTCCHHHHHHHHHHHTT-C-BBCCC
T ss_pred CC--ccccc------------------------------------cHHHHHHHHHhCCCHHHHHHHHHHHCC-C-EEEcC
Confidence 83 11111 167899999999999999999999995 5 68999
Q ss_pred cCCCCHHHHHHhHhhhcCCCCHHHHHHHHHHHhc
Q 022300 249 VRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKK 282 (299)
Q Consensus 249 ~~~~~~e~l~enl~a~~~~Lt~e~~~~i~~~~~~ 282 (299)
++ +++||++|+++++++||+++++.|+++.+.
T Consensus 233 ~~--~~~~l~en~~~~~~~L~~~~~~~l~~~~~~ 264 (278)
T 1hw6_A 233 SV--RRERLEENLDVFDFDLTDTEIAAIDAMDPG 264 (278)
T ss_dssp CC--SHHHHHHHHCCSSCCCCHHHHHHHHTTCC-
T ss_pred CC--CHHHHHHHHhhcCCCCCHHHHHHHHHhhcc
Confidence 99 999999999999999999999999988544
No 18
>3o0k_A Aldo/keto reductase; ssgcid, ALS collaborative crystallography; 1.80A {Brucella melitensis biovar}
Probab=100.00 E-value=1.5e-47 Score=342.49 Aligned_cols=215 Identities=21% Similarity=0.316 Sum_probs=192.0
Q ss_pred ceeeccccccCCCc--cHHHhhhc------CCCcEEEEecccCCCCCCCHHHHHHHHHHHHhhcCCCcccEEEEecCCCC
Q 022300 17 PITMGLLKISMASS--SIEFVERG------HQSSWISLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYS 88 (299)
Q Consensus 17 ~~~~g~~~~~~ag~--sE~~lg~~------~R~~i~I~tK~~~~~~~~~~~~i~~~ve~SL~~Lg~d~iDl~~lH~pd~~ 88 (299)
.++.|++.||+|.. +|+.+|++ .|+++||+||+++ ...+++.+++++++||++||+||||+|++|||+..
T Consensus 59 Al~~Gi~~~DTA~~Yg~E~~lG~al~~~~~~R~~~~i~TK~~~--~~~~~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~ 136 (283)
T 3o0k_A 59 ALKAGYRHIDTATIYGNEEGVGKAINGSGIARADIFLTTKLWN--SDQGYESTLKAFDTSLKKLGTDYVDLYLIHWPMPS 136 (283)
T ss_dssp HHHHTCCEEECCGGGSCHHHHHHHHHTSSSCGGGCEEEEEECG--GGCSHHHHHHHHHHHHHHHTSSCEEEEEECCSCSC
T ss_pred HHHcCCCEEECcccccCHHHHHHHHHHcCCCcccEEEEEccCC--CCCCHHHHHHHHHHHHHHhCCCceeEEEECCCCCC
Confidence 35678888888742 69999986 3899999999986 34679999999999999999999999999999876
Q ss_pred CCcHHHHHHHHHHHHHcCcccEEEecCCCHHHHHHHHHc-CCCeeEeeecccccccChhhHHHHHHHHhCCeEEEccccc
Q 022300 89 NPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-GIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYGTVM 167 (299)
Q Consensus 89 ~~~~~~~~~~L~~l~~~Gkir~iGvs~~~~~~l~~~~~~-~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~~~~pl~ 167 (299)
....+++|++|++|+++||||+||||||+.++++++++. ++++.++|++||++.+. .+++++|+++||++++|+||+
T Consensus 137 ~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~p~~~Q~~~~~~~~~--~~l~~~~~~~gi~v~a~spL~ 214 (283)
T 3o0k_A 137 KDLFMETWRAFIKLKEEGRVKSIGVSNFRTADLERLIKESGVTPVLNQIELHPQFQQ--DELRLFHGKHDIATEAWSPLG 214 (283)
T ss_dssp HHHHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHHSCCCSEEEEECBTTBCC--HHHHHHHHHTTCEEEEESTTC
T ss_pred cccHHHHHHHHHHHHHCCCcceEEeccCcHHHHHHHHHhCCCCeEEEEeecCcccCc--HHHHHHHHHCCcEEEEecCCC
Confidence 433789999999999999999999999999999999876 77889999999998764 579999999999999999999
Q ss_pred ccccCCcccCCCCCCCCCCCCCCCchhHHHHhhhhhcCCchHHHHHHHHHHHHHHHhCCCHHHHHHHHHHhCCCCceeee
Q 022300 168 GGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASKHGVSIPVVAVRYILDQPAVAGSMI 247 (299)
Q Consensus 168 ~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~la~~~~~s~aq~al~~~l~~~~v~~~i~ 247 (299)
+|.|.. .+.+.++|+++|+|++|+||+|+++++.| +|+
T Consensus 215 ~G~l~~----------------------------------------~~~l~~ia~~~g~t~aqvaL~w~l~~~~v--~I~ 252 (283)
T 3o0k_A 215 QGKLLE----------------------------------------DPTLKSIAEKHAKSVAQIILRWHIETGNI--VIP 252 (283)
T ss_dssp CC-CTT----------------------------------------CHHHHHHHHHHTSCHHHHHHHHHHHHTCE--ECC
T ss_pred CCcccc----------------------------------------chHHHHHHHHhCCCHHHHHHHHHHHCCCE--EEe
Confidence 997631 16789999999999999999999999976 799
Q ss_pred ccCCCCHHHHHHhHhhhcCCCCHHHHHHHHHH
Q 022300 248 GVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEV 279 (299)
Q Consensus 248 g~~~~~~e~l~enl~a~~~~Lt~e~~~~i~~~ 279 (299)
|++ +++||++|+++++++||++|++.|+++
T Consensus 253 g~~--~~~~l~en~~a~~~~Ls~ee~~~i~~l 282 (283)
T 3o0k_A 253 KSI--TPARIKENFDIFDFTLNGTDHDAITKL 282 (283)
T ss_dssp CCC--SHHHHHHHHCCSSCCCCHHHHHHHHTT
T ss_pred CCC--CHHHHHHHHHhCCCCCCHHHHHHHhcc
Confidence 999 999999999999999999999999864
No 19
>3b3e_A YVGN protein; aldo-keto reductase, oxidoreductase; 1.80A {Bacillus subtilis} PDB: 3b3d_A
Probab=100.00 E-value=4.9e-47 Score=343.01 Aligned_cols=217 Identities=24% Similarity=0.376 Sum_probs=195.1
Q ss_pred ceeeccccccCCCc--cHHHhhhc------CCCcEEEEecccCCCCCCCHHHHHHHHHHHHhhcCCCcccEEEEecCCCC
Q 022300 17 PITMGLLKISMASS--SIEFVERG------HQSSWISLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYS 88 (299)
Q Consensus 17 ~~~~g~~~~~~ag~--sE~~lg~~------~R~~i~I~tK~~~~~~~~~~~~i~~~ve~SL~~Lg~d~iDl~~lH~pd~~ 88 (299)
.++.|++.||+|.. +|+.+|++ .|+++||+||+++ .+.+++.+++++++||++||+||||+|++|||+..
T Consensus 74 Al~~Gi~~~DTA~~Yg~E~~lG~al~~~~~~R~~v~I~TK~~~--~~~~~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~ 151 (310)
T 3b3e_A 74 AIKNGYRSIDTAAIYKNEEGVGIGIKESGVAREELFITSKVWN--EDQGYETTLAAFEKSLERLQLDYLDLYLIHWPGKD 151 (310)
T ss_dssp HHHTTCCEEECCGGGSCHHHHHHHHHHSSSCGGGCEEEEEECG--GGCSHHHHHHHHHHHHHHHTCSCEEEEEESCCCSS
T ss_pred HHHcCCCEEECCCccCCHHHHHHHHHhcCCCcceEEEEEeCCC--CCCCHHHHHHHHHHHHHHhCCCeeEEEEeeCCCcc
Confidence 35678888887752 79999986 4899999999986 35689999999999999999999999999999865
Q ss_pred CCcHHHHHHHHHHHHHcCcccEEEecCCCHHHHHHHHHc-CCCeeEeeecccccccChhhHHHHHHHHhCCeEEEccccc
Q 022300 89 NPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-GIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYGTVM 167 (299)
Q Consensus 89 ~~~~~~~~~~L~~l~~~Gkir~iGvs~~~~~~l~~~~~~-~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~~~~pl~ 167 (299)
. .+++|++|++|+++||||+||||||+.++++++++. ++++.++|++||++.+. .+++++|+++||++++|+||+
T Consensus 152 ~--~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~p~~~Q~~~~~~~~~--~~l~~~~~~~gi~v~a~spL~ 227 (310)
T 3b3e_A 152 K--YKDTWRALEKLYKDGKIRAIGVSNFQVHHLEELLKDAEIKPMVNQVEFHPRLTQ--KELRDYCKGQGIQLEAWSPLM 227 (310)
T ss_dssp C--HHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHCSSCCSEEEEECBTTBCC--HHHHHHHHHHTCEEEEESTTG
T ss_pred c--HHHHHHHHHHHHHcCCcceEeecCCCHHHHHHHHHhcCCCcceeeeeccCccCC--HHHHHHHHHcCCEEEEecccc
Confidence 4 789999999999999999999999999999999887 67899999999998764 579999999999999999999
Q ss_pred ccccCCcccCCCCCCCCCCCCCCCchhHHHHhhhhhcCCchHHHHHHHHHHHHHHHhCCCHHHHHHHHHHhCCCCceeee
Q 022300 168 GGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASKHGVSIPVVAVRYILDQPAVAGSMI 247 (299)
Q Consensus 168 ~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~la~~~~~s~aq~al~~~l~~~~v~~~i~ 247 (299)
+|.|.. .+.+.++|+++|+|++|+||+|+++++.| +|+
T Consensus 228 ~G~l~~----------------------------------------~~~l~~iA~~~g~t~aqvaL~w~l~~~~v--~I~ 265 (310)
T 3b3e_A 228 QGQLLD----------------------------------------NEVLTQIAEKHNKSVAQVILRWDLQHGVV--TIP 265 (310)
T ss_dssp GGTTTT----------------------------------------CHHHHHHHHHHTCCHHHHHHHHHHHTTCE--ECC
T ss_pred CCCcCC----------------------------------------CHHHHHHHHHhCCCHHHHHHHHHHcCCCe--EEe
Confidence 997632 16789999999999999999999999966 799
Q ss_pred ccCCCCHHHHHHhHhhhcCCCCHHHHHHHHHHHhcC
Q 022300 248 GVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKKG 283 (299)
Q Consensus 248 g~~~~~~e~l~enl~a~~~~Lt~e~~~~i~~~~~~~ 283 (299)
|++ +++||++|+++++++||++|++.|+++.++.
T Consensus 266 gs~--~~~~l~en~~a~~~~Ls~ee~~~l~~l~~~~ 299 (310)
T 3b3e_A 266 KSI--KEHRIIENADIFDFELSQEDMDKIDALNKDE 299 (310)
T ss_dssp BCC--SHHHHHHHTCCSSCCCCHHHHHHHHTTCCCC
T ss_pred CCC--CHHHHHHHHHhccCCCCHHHHHHHHhhhhCC
Confidence 999 9999999999999999999999999985433
No 20
>2wzm_A Aldo-keto reductase; oxidoreductase; HET: NA7; 1.64A {Mycobacterium smegmatis} PDB: 2wzt_A
Probab=100.00 E-value=3.2e-47 Score=340.43 Aligned_cols=218 Identities=19% Similarity=0.259 Sum_probs=194.6
Q ss_pred eeeccccccCCCc--cHHHhhhc------CCCcEEEEecccCCCCCCCHHHHHHHHHHHHhhcCCCcccEEEEecCCCCC
Q 022300 18 ITMGLLKISMASS--SIEFVERG------HQSSWISLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSN 89 (299)
Q Consensus 18 ~~~g~~~~~~ag~--sE~~lg~~------~R~~i~I~tK~~~~~~~~~~~~i~~~ve~SL~~Lg~d~iDl~~lH~pd~~~ 89 (299)
+..|++.||+|.. +|+.+|++ .|+++||+||+++ .+++++.+++++++||++||+||||+|++|||+...
T Consensus 45 l~~Gi~~iDTA~~Yg~E~~lG~al~~~~~~R~~v~i~TK~~~--~~~~~~~v~~~~~~SL~rL~~dyiDl~llH~p~~~~ 122 (283)
T 2wzm_A 45 LEAGYRLIDTAAAYGNEAAVGRAIAASGIPRDEIYVTTKLAT--PDQGFTSSQAAARASLERLGLDYVDLYLIHWPGGDT 122 (283)
T ss_dssp HHHTCCEEECCGGGTCHHHHHHHHHHTCCCGGGCEEEEEECG--GGCSHHHHHHHHHHHHHHHTCSCEEEEEECCCTTCH
T ss_pred HHcCCCEEECCCcccCHHHHHHHHHhcCCCcccEEEEeccCC--CCCCHHHHHHHHHHHHHHhCCCCEeEEEEcCCCCCC
Confidence 5678888988753 79999987 4899999999976 356899999999999999999999999999998642
Q ss_pred CcHHHHHHHHHHHHHcCcccEEEecCCCHHHHHHHHHc-CCCeeEeeecccccccChhhHHHHHHHHhCCeEEEcccccc
Q 022300 90 PGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-GIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYGTVMG 168 (299)
Q Consensus 90 ~~~~~~~~~L~~l~~~Gkir~iGvs~~~~~~l~~~~~~-~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~~~~pl~~ 168 (299)
....++|++|++|+++||||+||||||+.++++++++. +++|+++|++||++++. .+++++|+++||++++|+||++
T Consensus 123 ~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~p~~~Q~~~~~~~~~--~~l~~~~~~~gi~v~a~spl~~ 200 (283)
T 2wzm_A 123 SKYVDSWGGLMKVKEDGIARSIGVCNFGAEDLETIVSLTYFTPAVNQIELHPLLNQ--AALREVNAGYNIVTEAYGPLGV 200 (283)
T ss_dssp HHHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHHCCCCSEEEEECBTTBCC--HHHHHHHHHTTCEEEEECTTTT
T ss_pred CCHHHHHHHHHHHHHcCCccEEEEcCCCHHHHHHHHHhcCCCcccccccCCcccCC--HHHHHHHHHCCCEEEEecCCCC
Confidence 23789999999999999999999999999999999887 77899999999998876 4699999999999999999999
Q ss_pred cccCCcccCCCCCCCCCCCCCCCchhHHHHhhhhhcCCchHHHHHHHHHHHHHHHhCCCHHHHHHHHHHhCCCCceeeec
Q 022300 169 GLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASKHGVSIPVVAVRYILDQPAVAGSMIG 248 (299)
Q Consensus 169 G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~la~~~~~s~aq~al~~~l~~~~v~~~i~g 248 (299)
|.|.. .+.+.++|+++|+|++|+||+|+++++ + ++|+|
T Consensus 201 G~l~~----------------------------------------~~~l~~ia~~~g~s~aqvaL~w~l~~~-~-~~I~g 238 (283)
T 2wzm_A 201 GRLLD----------------------------------------HPAVTAIAEAHGRTAAQVLLRWSIQLG-N-VVISR 238 (283)
T ss_dssp TGGGG----------------------------------------CHHHHHHHHHHTCCHHHHHHHHHHHTT-C-EEEEC
T ss_pred Ccccc----------------------------------------hHHHHHHHHHhCCCHHHHHHHHHHHCC-C-EEEeC
Confidence 85411 167899999999999999999999996 4 68999
Q ss_pred cCCCCHHHHHHhHhhhcCCCCHHHHHHHHHHHhcC
Q 022300 249 VRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKKG 283 (299)
Q Consensus 249 ~~~~~~e~l~enl~a~~~~Lt~e~~~~i~~~~~~~ 283 (299)
++ +++||++|+++++++||+++++.|+++.+..
T Consensus 239 ~~--~~~~l~en~~~~~~~L~~~~~~~l~~~~~~~ 271 (283)
T 2wzm_A 239 SA--NPERIASNLDVFGFELTADEMETLNGLDDGT 271 (283)
T ss_dssp CS--SHHHHHHHHCCSSCCCCHHHHHHHHTCCCCC
T ss_pred CC--CHHHHHHHHHhcCCCCCHHHHHHHHHHhhcC
Confidence 99 9999999999999999999999999986443
No 21
>1vbj_A Prostaglandin F synthase; TIM barrel, oxidoreductase; HET: NAP CIT; 2.10A {Trypanosoma brucei}
Probab=100.00 E-value=5.7e-47 Score=338.48 Aligned_cols=216 Identities=18% Similarity=0.312 Sum_probs=193.3
Q ss_pred eeeccccccCCCc--cHHHhhhc------CCCcEEEEecccCCCCCCCHHHHHHHHHHHHhhcCCCcccEEEEecCCCCC
Q 022300 18 ITMGLLKISMASS--SIEFVERG------HQSSWISLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSN 89 (299)
Q Consensus 18 ~~~g~~~~~~ag~--sE~~lg~~------~R~~i~I~tK~~~~~~~~~~~~i~~~ve~SL~~Lg~d~iDl~~lH~pd~~~ 89 (299)
++.|++.||+|.. +|+.+|++ .|++++|+||+++ .+.+++.+++++++||++||+||||+|++|||+ ..
T Consensus 44 l~~G~~~iDTA~~Yg~E~~vG~al~~~~~~R~~~~i~TK~~~--~~~~~~~v~~~~~~SL~rL~~dyiDl~~lH~p~-~~ 120 (281)
T 1vbj_A 44 IKSGYRHIDTAAIYKNEESAGRAIASCGVPREELFVTTKLWN--SDQGYESTLSAFEKSIKKLGLEYVDLYLIHWPG-KD 120 (281)
T ss_dssp HHHTCCEEECCGGGTCHHHHHHHHHHSSSCGGGCEEEEEECG--GGCSHHHHHHHHHHHHHHHTCSCBSEEEESCCC-SS
T ss_pred HHcCCCEEECCcccCCHHHHHHHHHhcCCChhHEEEEeccCC--CCCCHHHHHHHHHHHHHHhCCCcEEEEEEcCCC-CC
Confidence 5678888888753 79999987 4899999999986 356899999999999999999999999999998 44
Q ss_pred CcHHHHHHHHHHHHHcCcccEEEecCCCHHHHHHHHHc-CCCeeEeeecccccccChhhHHHHHHHHhCCeEEEcccccc
Q 022300 90 PGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-GIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYGTVMG 168 (299)
Q Consensus 90 ~~~~~~~~~L~~l~~~Gkir~iGvs~~~~~~l~~~~~~-~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~~~~pl~~ 168 (299)
+ ..++|++|++|+++||||+||||||+.++++++++. +++|.++|++||++++. .+++++|+++||++++|+||++
T Consensus 121 ~-~~~~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~p~~~Q~~~~~~~~~--~~l~~~~~~~gi~v~a~spL~~ 197 (281)
T 1vbj_A 121 K-FIDTWKAFEKLYADKKVRAIGVSNFHEHHIEELLKHCKVAPMVNQIELHPLLNQ--KALCEYCKSKNIAVTAWSPLGQ 197 (281)
T ss_dssp C-HHHHHHHHHHHHHTTSBSCEEEESCCHHHHHHHHTSCSSCCSEEEEECBTTBCC--HHHHHHHHHTTCEEEEESTTGG
T ss_pred C-HHHHHHHHHHHHHCCCccEEEeeCCCHHHHHHHHHhCCCCceeeeEEeccccCC--HHHHHHHHHcCCEEEEecCCcC
Confidence 5 889999999999999999999999999999999886 67889999999998875 4799999999999999999999
Q ss_pred cccCCcccCCCCCCCCCCCCCCCchhHHHHhhhhhcCCchHHHHHHHHHHHHHHHhCCCHHHHHHHHHHhCCCCceeeec
Q 022300 169 GLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASKHGVSIPVVAVRYILDQPAVAGSMIG 248 (299)
Q Consensus 169 G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~la~~~~~s~aq~al~~~l~~~~v~~~i~g 248 (299)
|.+. . .+.+.++|+++|+|++|+||+|+++++ + ++|+|
T Consensus 198 G~~~----~------------------------------------~~~l~~ia~~~g~s~aqvaL~w~l~~~-~-~~I~g 235 (281)
T 1vbj_A 198 GHLV----E------------------------------------DARLKAIGGKYGKTAAQVMLRWEIQAG-V-ITIPK 235 (281)
T ss_dssp GTTT----T------------------------------------CHHHHHHHHTTTCCHHHHHHHHHHHTT-C-EECCB
T ss_pred CCCC----C------------------------------------CHHHHHHHHHhCCCHHHHHHHHHHHCC-C-EEecC
Confidence 9431 0 167899999999999999999999996 4 68999
Q ss_pred cCCCCHHHHHHhHhhhcCCCCHHHHHHHHHHHhcC
Q 022300 249 VRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKKG 283 (299)
Q Consensus 249 ~~~~~~e~l~enl~a~~~~Lt~e~~~~i~~~~~~~ 283 (299)
++ +++||++|+++++++||+++++.|+++.+..
T Consensus 236 ~~--~~~~l~en~~a~~~~L~~e~~~~l~~~~~~~ 268 (281)
T 1vbj_A 236 SG--NEARIKENGNIFDFELTAEDIQVIDGMNAGH 268 (281)
T ss_dssp CS--CHHHHHHHHCCSSCCCCHHHHHHHHTTCCCC
T ss_pred CC--CHHHHHHHHhhcCCCCCHHHHHHHHHhhccC
Confidence 99 9999999999999999999999999986543
No 22
>3o3r_A Aldo-keto reductase family 1, member B7; aldose reductase like protein, AKR1B14, oxidoreductase; HET: NAP; 1.86A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 3qkz_A*
Probab=100.00 E-value=1.3e-46 Score=341.99 Aligned_cols=229 Identities=20% Similarity=0.360 Sum_probs=194.4
Q ss_pred ceeeccccccCCCc--cHHHhhhc----------CCCcEEEEecccCCCCCCCHHHHHHHHHHHHhhcCCCcccEEEEec
Q 022300 17 PITMGLLKISMASS--SIEFVERG----------HQSSWISLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHW 84 (299)
Q Consensus 17 ~~~~g~~~~~~ag~--sE~~lg~~----------~R~~i~I~tK~~~~~~~~~~~~i~~~ve~SL~~Lg~d~iDl~~lH~ 84 (299)
.++.|++.||+|.. +|+.+|++ .|+++||+||+|+ ...+++.+++++++||++|||||||+|++||
T Consensus 35 Al~~Gi~~~DTA~~Yg~E~~lG~al~~~~~~~~~~R~~v~I~TK~~~--~~~~~~~i~~~~~~SL~rL~~dyiDl~~lH~ 112 (316)
T 3o3r_A 35 AIDAGYRHFDCAYVYQNESEVGEAIQEKIKEKAVRREDLFIVSKLWS--TFFEKSLMKEAFQKTLSDLKLDYLDLYLIHW 112 (316)
T ss_dssp HHHTTCCEEECCGGGSCHHHHHHHHHHHHHTTSCCGGGCEEEEEECG--GGCSHHHHHHHHHHHHHHHTCSCEEEEEESC
T ss_pred HHHcCCCEEEccCccCCHHHHHHHHHHHHhhCCCChHHcEEEeeeCC--CcCCHHHHHHHHHHHHHHcCCCeeeEEEEcC
Confidence 46789999999863 79999974 4899999999986 3468999999999999999999999999999
Q ss_pred CC-------------------CCCCcHHHHHHHHHHHHHcCcccEEEecCCCHHHHHHHHHc-CC--CeeEeeecccccc
Q 022300 85 WD-------------------YSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-GI--PVVSNQVQHSVVD 142 (299)
Q Consensus 85 pd-------------------~~~~~~~~~~~~L~~l~~~Gkir~iGvs~~~~~~l~~~~~~-~~--~~~~~q~~~n~~~ 142 (299)
|+ ...+ ++++|++|++|+++||||+||||||+.++++++++. ++ +|+++|++||++.
T Consensus 113 p~~~~~~~~~~~~~~~~~~~~~~~~-~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~p~~~Q~~~~~~~ 191 (316)
T 3o3r_A 113 PQGLQAGKEFLPKDSQGKVLMSKST-FLDAWEGMEELVDQGLVKALGVSNFNHFQIERLLNKPGLKHKPVTNQVECHPYL 191 (316)
T ss_dssp SSCBCCSSCSSCBCTTSCBCBCSCC-HHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHTCTTCCSCCCEEEEECBTTB
T ss_pred CccccCccccccccccccccccccc-HHHHHHHHHHHHHcCCCcEEEEecCCHHHHHHHHHhCCCCCCceEeeccCCccc
Confidence 96 2234 789999999999999999999999999999999886 33 5999999999987
Q ss_pred cChhhHHHHHHHHhCCeEEEcccccccccCCcccCCCCCCCCCCCCCCCchhHHHHhhhhhcCCchHHHHHHHHHHHHHH
Q 022300 143 MRPQQKMAELCQLTGVKLITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIAS 222 (299)
Q Consensus 143 ~~~~~~~~~~~~~~gi~v~~~~pl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~la~ 222 (299)
+. .+++++|+++||++++|+||++|... +... .. ...+. .+.+.++|+
T Consensus 192 ~~--~~l~~~~~~~gi~v~a~spL~~G~~~--~~~~---------~~-----------------~~~~~--~~~l~~ia~ 239 (316)
T 3o3r_A 192 TQ--EKLIQYCHSKGIAVIAYSPLGSPDRP--YAKP---------ED-----------------PVVLE--IPKIKEIAA 239 (316)
T ss_dssp CC--HHHHHHHHTTTCEEEEECTTCCTTCT--TCCT---------TS-----------------CCSTT--CHHHHHHHH
T ss_pred ch--HHHHHHHHHcCCEEEEecccCCCCCc--cccc---------cc-----------------hhhhc--CHHHHHHHH
Confidence 64 57999999999999999999998311 1100 00 00000 268999999
Q ss_pred HhCCCHHHHHHHHHHhCCCCceeeeccCCCCHHHHHHhHhhhcCCCCHHHHHHHHHHHhcCC
Q 022300 223 KHGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKKGK 284 (299)
Q Consensus 223 ~~~~s~aq~al~~~l~~~~v~~~i~g~~~~~~e~l~enl~a~~~~Lt~e~~~~i~~~~~~~~ 284 (299)
++|+|++|+||+|+++++. ++|+|++ +++||++|+++++++||++|++.|+++.+..+
T Consensus 240 ~~g~t~aqvaL~w~l~~~~--~vi~g~~--~~~~l~en~~a~~~~L~~ee~~~l~~l~~~~r 297 (316)
T 3o3r_A 240 KHKKTIAQVLIRFHVQRNV--AVIPKSV--TLSHIKENIQVFDFQLSEEDMAAILSLNRNWR 297 (316)
T ss_dssp HHTCCHHHHHHHHHHTTTC--EECCBCC--SHHHHHHHTCCSSCCCCHHHHHHHHTTCCCCC
T ss_pred HhCCCHHHHHHHHHHhCCC--EEeCCCC--CHHHHHHHHhhCCCCcCHHHHHHHHccccCCc
Confidence 9999999999999999984 5899999 99999999999999999999999999865544
No 23
>3ln3_A Dihydrodiol dehydrogenase; putative reductase, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: MLY MSE NAD; 1.18A {Mus musculus} SCOP: c.1.7.1
Probab=100.00 E-value=2.6e-46 Score=341.07 Aligned_cols=231 Identities=17% Similarity=0.314 Sum_probs=196.3
Q ss_pred ceeeccccccCCCc--cHHHhhhc----------CCCcEEEEecccCCCCCCCHHHHHHHHHHHHhhcCCCcccEEEEec
Q 022300 17 PITMGLLKISMASS--SIEFVERG----------HQSSWISLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHW 84 (299)
Q Consensus 17 ~~~~g~~~~~~ag~--sE~~lg~~----------~R~~i~I~tK~~~~~~~~~~~~i~~~ve~SL~~Lg~d~iDl~~lH~ 84 (299)
.++.|++.||+|.. +|+.+|++ .|+++||+||+++ ...+++.+++++++||++||+||||+|++||
T Consensus 42 Al~~Gi~~~DTA~~Yg~E~~lG~al~~~~~~~~~~R~~~~I~TK~~~--~~~~~~~v~~~~~~SL~rL~~dyiDl~llH~ 119 (324)
T 3ln3_A 42 ALDVGYRHVDTAYAYQVEEEIGQAIQSXIXAGVVXREDLFVTTKLWC--TCFRPELVXPALEXSLXXLQLDYVDLYIMHY 119 (324)
T ss_dssp HHHHTCCEEECCGGGTCHHHHHHHHHHHHHTTSCCGGGCEEEEEECG--GGCSHHHHHHHHHHHHHHHTCSCEEEEEESC
T ss_pred HHHcCCCEEECcccccCHHHHHHHHHHhhccCCcccceeEEEeeeCC--ccCCHHHHHHHHHHHHHHhCCCcceEEEEec
Confidence 46789999998853 79999975 4899999999986 3568999999999999999999999999999
Q ss_pred CCCC------------------CCcHHHHHHHHHHHHHcCcccEEEecCCCHHHHHHHHHc-CCC--eeEeeeccccccc
Q 022300 85 WDYS------------------NPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-GIP--VVSNQVQHSVVDM 143 (299)
Q Consensus 85 pd~~------------------~~~~~~~~~~L~~l~~~Gkir~iGvs~~~~~~l~~~~~~-~~~--~~~~q~~~n~~~~ 143 (299)
|+.. ...++++|++|++|+++||||+||||||+.++++++++. +++ |.++|++||++.+
T Consensus 120 p~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~p~~~Q~~~~~~~~ 199 (324)
T 3ln3_A 120 PVPMXSGDNDFPVNEQGXSLLDTVDFCDTWERLEECXDAGLVXSIGVSNFNHRQLERILNXPGLXYXPVCNQVECHLYLN 199 (324)
T ss_dssp SCCBCCSSCSSCBCTTCCBCBCCCCHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHTCTTCCCCCSEEEEECBTTBC
T ss_pred CccccccccccccccccccccccCCHHHHHHHHHHHHhcCCeeEEEecCCcHHHHHHHHHhcCccCCceeeEeeeCcccc
Confidence 9752 112789999999999999999999999999999999887 555 8999999999876
Q ss_pred ChhhHHHHHHHHhCCeEEEcccccccccCCcccCCCCCCCCCCCCCCCchhHHHHhhhhhcCCchHHHHHHHHHHHHHHH
Q 022300 144 RPQQKMAELCQLTGVKLITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASK 223 (299)
Q Consensus 144 ~~~~~~~~~~~~~gi~v~~~~pl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~la~~ 223 (299)
. .+++++|+++||++++|+||++|.+.. +.... .+ ..+. .+.+.++|++
T Consensus 200 ~--~~l~~~~~~~gi~v~a~spL~~g~~~~-~~~~~--~~------------------------~~~~--~~~l~~ia~~ 248 (324)
T 3ln3_A 200 Q--RXLLDYCESXDIVLVAYGALGTQRYXE-WVDQN--SP------------------------VLLN--DPVLCDVAXX 248 (324)
T ss_dssp C--HHHHHHHHHTTCEEEEESTTSCCCCTT-TSCTT--SC------------------------CGGG--CHHHHHHHHH
T ss_pred h--HHHHHHHHHcCCEEEEecCCCCCCccc-ccccC--Cc------------------------chhc--CHHHHHHHHh
Confidence 3 579999999999999999999997532 11100 00 0011 2689999999
Q ss_pred hCCCHHHHHHHHHHhCCCCceeeeccCCCCHHHHHHhHhhhcCCCCHHHHHHHHHHHhcCC
Q 022300 224 HGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKKGK 284 (299)
Q Consensus 224 ~~~s~aq~al~~~l~~~~v~~~i~g~~~~~~e~l~enl~a~~~~Lt~e~~~~i~~~~~~~~ 284 (299)
+|+|++|+||+|+++++. ++|+|++ +++||++|+++++++||+++++.|+++.+..+
T Consensus 249 ~g~t~aqvaL~w~l~~~~--~~I~g~~--~~~~l~en~~~~~~~L~~e~~~~l~~l~~~~r 305 (324)
T 3ln3_A 249 NXRSPALIALRYLIQRGI--VPLAQSF--XENEMRENLQVFGFQLSPEDMXTLDGLNXNFR 305 (324)
T ss_dssp HTSCHHHHHHHHHHHTTC--EEEECCS--SHHHHHHHGGGGGCCCCHHHHHHHHTTCCCCC
T ss_pred hCCCHHHHHHHHHHhCCC--EEEeCCC--CHHHHHHHHhhCCCCcCHHHHHHHHhcccCCc
Confidence 999999999999999984 5899999 99999999999999999999999999865443
No 24
>1qwk_A Aldose reductase, aldo-keto reductase family 1 member C1, XH961; structural genomics, PSI, protein structure initiative; 1.60A {Caenorhabditis elegans} SCOP: c.1.7.1
Probab=100.00 E-value=8.1e-47 Score=343.34 Aligned_cols=238 Identities=18% Similarity=0.225 Sum_probs=199.3
Q ss_pred ceeeccccccCCCc--cHHHhhhc----------CCCcEEEEecccCCCCCCCHHHHHHHHHHHHhhcCCCcccEEEEec
Q 022300 17 PITMGLLKISMASS--SIEFVERG----------HQSSWISLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHW 84 (299)
Q Consensus 17 ~~~~g~~~~~~ag~--sE~~lg~~----------~R~~i~I~tK~~~~~~~~~~~~i~~~ve~SL~~Lg~d~iDl~~lH~ 84 (299)
.++.|++.||+|.. +|+.+|++ .|++++|+||+++ ...+++.+++++++||++||+||||+|++||
T Consensus 38 Al~~Gi~~~DTA~~Yg~E~~vG~al~~~~~~~~~~R~~~~i~TK~~~--~~~~~~~i~~~~~~SL~rL~~dyiDl~~lH~ 115 (317)
T 1qwk_A 38 AVKAGYRLIDTASVYQNEEAIGTAIKELLEEGVVKREELFITTKAWT--HELAPGKLEGGLRESLKKLQLEYVDLYLAHM 115 (317)
T ss_dssp HHHHTCCEEECCGGGTCHHHHHHHHHHHHHHTSCCGGGCEEEEEECT--TTSSTTTHHHHHHHHHHHHTCSCBSEEEESC
T ss_pred HHHcCCCEEEccccccCHHHHHHHHHHHhhcCCCChhheEEEeeeCC--CcCCHHHHHHHHHHHHHHhCCCceeEEEEec
Confidence 35678899998853 79999976 4899999999986 3567899999999999999999999999999
Q ss_pred CCC---------CCCcHHHHHHHHHHHHHcCcccEEEecCCCHHHHHHHHHc-CCCeeEeeecccccccChhhHHHHHHH
Q 022300 85 WDY---------SNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-GIPVVSNQVQHSVVDMRPQQKMAELCQ 154 (299)
Q Consensus 85 pd~---------~~~~~~~~~~~L~~l~~~Gkir~iGvs~~~~~~l~~~~~~-~~~~~~~q~~~n~~~~~~~~~~~~~~~ 154 (299)
|+. ..+ .+++|++|++|+++||||+||||||+.++++++++. +++|+++|++||++++. .+++++|+
T Consensus 116 p~~~~~~~~~~~~~~-~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~--~~l~~~~~ 192 (317)
T 1qwk_A 116 PAAFNDDMSEHIASP-VEDVWRQFDAVYKAGLAKAVGVSNWNNDQISRALALGLTPVHNSQVELHLYFPQ--HDHVDFCK 192 (317)
T ss_dssp SCEECTTSCSEECCC-HHHHHHHHHHHHHTTSBSSEEEESCCHHHHHHHHTTCSSCCCEEEEECBTTBCC--HHHHHHHH
T ss_pred cCccccccccccCCC-HHHHHHHHHHHHHcCCeeEEEecCCCHHHHHHHHHhcCCccceecceeccccCc--HHHHHHHH
Confidence 974 224 789999999999999999999999999999999887 67899999999998765 57999999
Q ss_pred HhCCeEEEcccccccccCCcccCCCCCCCCCCCCCCCchhHHHHhhhhhcCCchHHHHHHHHHHHHHHHhCCCHHHHHHH
Q 022300 155 LTGVKLITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASKHGVSIPVVAVR 234 (299)
Q Consensus 155 ~~gi~v~~~~pl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~la~~~~~s~aq~al~ 234 (299)
++||++++|+||++|.|+ ++..... .+ ...+ ..+..++ .+.+.++|+++|+|++|+||+
T Consensus 193 ~~gI~v~a~spL~~G~l~-~~~~~~~-~~-~~~~----------------~~~~~~~--~~~l~~ia~~~g~s~aqvaL~ 251 (317)
T 1qwk_A 193 KHNISVTSYATLGSPGRV-NFTLPTG-QK-LDWA----------------PAPSDLQ--DQNVLALAEKTHKTPAQVLLR 251 (317)
T ss_dssp HTTCEEEEESTTCSCCEE-CCBCTTC-CB-CCCE----------------ECSSGGG--CHHHHHHHHHHTCCHHHHHHH
T ss_pred HcCCEEEEecCccCCCcc-ccccccc-cc-cccc----------------ccchhhc--cHHHHHHHHHHCcCHHHHHHH
Confidence 999999999999999876 4432100 00 0000 0001111 278899999999999999999
Q ss_pred HHHhCCCCceeeeccCCCCHHHHHHhHhhhcCCCCHHHHHHHHHHHhcCC
Q 022300 235 YILDQPAVAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKKGK 284 (299)
Q Consensus 235 ~~l~~~~v~~~i~g~~~~~~e~l~enl~a~~~~Lt~e~~~~i~~~~~~~~ 284 (299)
|+++++ + ++|+|++ +++||++|+++++++||+++++.|+++.+..+
T Consensus 252 w~l~~~-~-~vI~g~~--~~~~l~en~~a~~~~L~~e~~~~l~~~~~~~~ 297 (317)
T 1qwk_A 252 YALDRG-C-AILPKSI--QENRIKENFEVFDFSLTEEDIAKLEESKNSQR 297 (317)
T ss_dssp HHHHTT-C-EEECCCC--SHHHHHHHHCCSSCCCCHHHHHHHTTTCCCCC
T ss_pred HHHhCC-C-eEEeCCC--CHHHHHHHHhhcCCCCCHHHHHHHHHHhhcCc
Confidence 999998 3 7999999 99999999999999999999999999865543
No 25
>3buv_A 3-OXO-5-beta-steroid 4-dehydrogenase; 5-beta-reductase, catalytic tetrad, hepes, NADP, bIle catabolism, disease mutation, lipid metabolism; HET: NAP EPE; 1.35A {Homo sapiens} PDB: 3bur_A* 3bv7_A* 3caq_A* 3cas_A* 3cav_A* 3g1r_A* 3cot_A* 3dop_A* 3cmf_A* 3uzx_A* 3uzw_A* 3uzy_A* 3uzz_A*
Probab=100.00 E-value=3.1e-46 Score=340.74 Aligned_cols=230 Identities=17% Similarity=0.264 Sum_probs=197.1
Q ss_pred ceeeccccccCCCc--cHHHhhhc----------CCCcEEEEecccCCCCCCCHHHHHHHHHHHHhhcCCCcccEEEEec
Q 022300 17 PITMGLLKISMASS--SIEFVERG----------HQSSWISLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHW 84 (299)
Q Consensus 17 ~~~~g~~~~~~ag~--sE~~lg~~----------~R~~i~I~tK~~~~~~~~~~~~i~~~ve~SL~~Lg~d~iDl~~lH~ 84 (299)
.+..|++.||+|.. +|+.+|++ .|++++|+||+|+ ...+++.+++++++||++||+||||+|++||
T Consensus 44 Al~~G~~~iDTA~~Yg~E~~vG~al~~~~~~g~~~R~~~~i~TK~~~--~~~~~~~v~~~~~~SL~rL~~dyiDl~llH~ 121 (326)
T 3buv_A 44 AIDTGYRHIDGAYIYQNEHEVGEAIREKIAEGKVRREDIFYCGKLWA--TNHVPEMVRPTLERTLRVLQLDYVDLYIIEV 121 (326)
T ss_dssp HHHHTCCEEECCGGGTCHHHHHHHHHHHHHTTSCCGGGCEEEEEECG--GGCSHHHHHHHHHHHHHHHTCSCEEEEEESC
T ss_pred HHHcCCCEEECccccCCHHHHHHHHHHHHhcCCCChhHeEEEeeeCC--CcCCHHHHHHHHHHHHHHhCCCceeEEEEcc
Confidence 36778888998753 79999976 3899999999976 3568999999999999999999999999999
Q ss_pred CCCC------------------CCcHHHHHHHHHHHHHcCcccEEEecCCCHHHHHHHHHc-CCC--eeEeeeccccccc
Q 022300 85 WDYS------------------NPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-GIP--VVSNQVQHSVVDM 143 (299)
Q Consensus 85 pd~~------------------~~~~~~~~~~L~~l~~~Gkir~iGvs~~~~~~l~~~~~~-~~~--~~~~q~~~n~~~~ 143 (299)
|+.. ...+.++|++|++|+++||||+||||||+.++++++++. +++ |+++|++||++.+
T Consensus 122 p~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ale~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~p~~~Q~~~~~~~~ 201 (326)
T 3buv_A 122 PMAFKPGDEIYPRDENGKWLYHKSNLCATWEAMEACKDAGLVKSLGVSNFNRRQLELILNKPGLKHKPVSNQVECHPYFT 201 (326)
T ss_dssp SCCBCCSSCSSCBCTTCCBCBCCCCHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHTCTTCCSCCCEEEEECBTTBC
T ss_pred CCccCCccccCccccccccccccccHHHHHHHHHHHHHcCCccEEEEeCCCHHHHHHHHHhCCCCCCCeeeeeecccccC
Confidence 9641 113789999999999999999999999999999999887 566 8999999999876
Q ss_pred ChhhHHHHHHHHhCCeEEEcccccccccCCcccCCCCCCCCCCCCCCCchhHHHHhhhhhcCCchHHHHHHHHHHHHHHH
Q 022300 144 RPQQKMAELCQLTGVKLITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASK 223 (299)
Q Consensus 144 ~~~~~~~~~~~~~gi~v~~~~pl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~la~~ 223 (299)
. .+++++|+++||++++|+||++|.|+ ++.... .+ ..+. .+.+.++|++
T Consensus 202 ~--~~l~~~~~~~gI~v~a~spL~~G~l~-~~~~~~--~~------------------------~~~~--~~~l~~ia~~ 250 (326)
T 3buv_A 202 Q--PKLLKFCQQHDIVITAYSPLGTSRNP-IWVNVS--SP------------------------PLLK--DALLNSLGKR 250 (326)
T ss_dssp C--HHHHHHHHHTTCEEEEESTTCCCCCT-TTSCTT--SC------------------------CGGG--CHHHHHHHHH
T ss_pred c--HHHHHHHHHcCCEEEEeccccCCccc-cccccC--Cc------------------------cccc--cHHHHHHHHH
Confidence 5 47999999999999999999999886 443210 00 0000 2788999999
Q ss_pred hCCCHHHHHHHHHHhCCCCceeeeccCCCCHHHHHHhHhhhcCCCCHHHHHHHHHHHhcC
Q 022300 224 HGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKKG 283 (299)
Q Consensus 224 ~~~s~aq~al~~~l~~~~v~~~i~g~~~~~~e~l~enl~a~~~~Lt~e~~~~i~~~~~~~ 283 (299)
+|+|++|+||+|+++++ .++|+|++ +++||++|+++++++||+++++.|+++.+..
T Consensus 251 ~g~s~aqvaL~w~l~~~--~~~I~g~~--~~~~l~en~~~~~~~L~~e~~~~l~~~~~~~ 306 (326)
T 3buv_A 251 YNKTAAQIVLRFNIQRG--VVVIPKSF--NLERIKENFQIFDFSLTEEEMKDIEALNKNV 306 (326)
T ss_dssp HTCCHHHHHHHHHHHTT--CEECCBCC--SHHHHHHHHCCSSCCCCHHHHHHHHTTCCSC
T ss_pred hCCCHHHHHHHHHHhCC--CEEEeCCC--CHHHHHHHHhhcCCCCCHHHHHHHHHhccCC
Confidence 99999999999999998 46899999 9999999999999999999999999986543
No 26
>1us0_A Aldose reductase; oxidoreductase, NADP, IDD594; HET: NDP LDT CIT; 0.66A {Homo sapiens} SCOP: c.1.7.1 PDB: 1pwl_A* 1t41_A* 1pwm_A* 1x96_A* 1x97_A* 1x98_A* 1z89_A* 1z8a_A* 2dux_A* 2duz_A* 2dv0_A* 2fz8_A* 2fz9_A* 2fzb_A* 2fzd_A* 2hv5_A* 2hvn_A* 2hvo_A* 2i16_A* 2i17_A* ...
Probab=100.00 E-value=3.6e-46 Score=338.98 Aligned_cols=229 Identities=19% Similarity=0.317 Sum_probs=195.6
Q ss_pred ceeeccccccCCCc--cHHHhhhc----------CCCcEEEEecccCCCCCCCHHHHHHHHHHHHhhcCCCcccEEEEec
Q 022300 17 PITMGLLKISMASS--SIEFVERG----------HQSSWISLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHW 84 (299)
Q Consensus 17 ~~~~g~~~~~~ag~--sE~~lg~~----------~R~~i~I~tK~~~~~~~~~~~~i~~~ve~SL~~Lg~d~iDl~~lH~ 84 (299)
.++.|++.||+|.. +|+.+|++ .|++++|+||+++ ...+++.+++++++||++||+||||+|++||
T Consensus 35 Al~~G~~~iDTA~~Yg~E~~vG~al~~~~~~g~~~R~~~~I~TK~~~--~~~~~~~v~~~~~~SL~rL~~dyiDl~llH~ 112 (316)
T 1us0_A 35 AIDVGYRHIDCAHVYQNENEVGVAIQEKLREQVVKREELFIVSKLWC--TYHEKGLVKGACQKTLSDLKLDYLDLYLIHW 112 (316)
T ss_dssp HHHHTCCEEECCGGGTCHHHHHHHHHHHHHTTSSCGGGCEEEEEECG--GGCSHHHHHHHHHHHHHHHTCSCBSEEEESS
T ss_pred HHHcCCCEEEcccccCCHHHHHHHHHHHHhcCCCChhHeEEEEeeCC--CcCCHHHHHHHHHHHHHHhCCCceeeEEEec
Confidence 36678889998753 79999976 4899999999976 3568999999999999999999999999999
Q ss_pred CCCC------------------CCcHHHHHHHHHHHHHcCcccEEEecCCCHHHHHHHHHc-CC--CeeEeeeccccccc
Q 022300 85 WDYS------------------NPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-GI--PVVSNQVQHSVVDM 143 (299)
Q Consensus 85 pd~~------------------~~~~~~~~~~L~~l~~~Gkir~iGvs~~~~~~l~~~~~~-~~--~~~~~q~~~n~~~~ 143 (299)
|+.. ...++++|++|++|+++||||+||||||+.++++++++. .+ +|+++|++||++.+
T Consensus 113 p~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ale~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~p~~~Q~~~~~~~~ 192 (316)
T 1us0_A 113 PTGFKPGKEFFPLDESGNVVPSDTNILDTWAAMEELVDEGLVKAIGISNFNHLQVEMILNKPGLKYKPAVNQIECHPYLT 192 (316)
T ss_dssp SCCBCCSSCSSCBCTTSCBCBCSCCHHHHHHHHHHHHHTTSBSCEEEESCCHHHHHHHHTCTTCCSCCSEEEEECBTTBC
T ss_pred CccccccccccccccccccccccccHHHHHHHHHHHHHCCCccEEEEecCCHHHHHHHHHhCcccCCceeeehhcCCccC
Confidence 9641 113789999999999999999999999999999999887 56 88999999999876
Q ss_pred ChhhHHHHHHHHhCCeEEEcccccccccCCcccCCCCCCCCCCCCCCCchhHHHHhhhhhcCCchHHHHHHHHHHHHHHH
Q 022300 144 RPQQKMAELCQLTGVKLITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASK 223 (299)
Q Consensus 144 ~~~~~~~~~~~~~gi~v~~~~pl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~la~~ 223 (299)
. .+++++|+++||++++|+||++|.|. +.... .+ ..+. .+.+.++|++
T Consensus 193 ~--~~l~~~~~~~gI~v~a~spL~~G~l~--~~~~~--~~------------------------~~~~--~~~l~~ia~~ 240 (316)
T 1us0_A 193 Q--EKLIQYCQSKGIVVTAYSPLGSPDRP--WAKPE--DP------------------------SLLE--DPRIKAIAAK 240 (316)
T ss_dssp C--HHHHHHHHHTTCEEEEESTTCCTTCT--TCCTT--SC------------------------CTTT--CHHHHHHHHH
T ss_pred C--HHHHHHHHHcCCEEEEecccccCccc--cccCC--Cc------------------------cccc--CHHHHHHHHH
Confidence 5 47999999999999999999999762 22110 00 0000 2788999999
Q ss_pred hCCCHHHHHHHHHHhCCCCceeeeccCCCCHHHHHHhHhhhcCCCCHHHHHHHHHHHhcC
Q 022300 224 HGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKKG 283 (299)
Q Consensus 224 ~~~s~aq~al~~~l~~~~v~~~i~g~~~~~~e~l~enl~a~~~~Lt~e~~~~i~~~~~~~ 283 (299)
+|+|++|+||+|+++++ + ++|+|++ +++||++|+++++++||+++++.|+++.+..
T Consensus 241 ~g~s~aqvaL~w~l~~~-~-~~I~g~~--~~~~l~en~~~~~~~L~~e~~~~l~~~~~~~ 296 (316)
T 1us0_A 241 HNKTTAQVLIRFPMQRN-L-VVIPKSV--TPERIAENFKVFDFELSSQDMTTLLSYNRNW 296 (316)
T ss_dssp HTCCHHHHHHHHHHHTT-C-EECCBCC--CHHHHHHHHCCSSCCCCHHHHHHHHTTCCCC
T ss_pred hCCCHHHHHHHHHHHCC-C-EEEeCCC--CHHHHHHHhhhcCCCCCHHHHHHHHhhccCC
Confidence 99999999999999998 3 7999999 9999999999999999999999999986544
No 27
>1vp5_A 2,5-diketo-D-gluconic acid reductase; TM1009, structural genomics, joint center for structural genomics, PSI, protein structure initiative; HET: NAP; 2.40A {Thermotoga maritima} SCOP: c.1.7.1
Probab=100.00 E-value=2.8e-46 Score=336.34 Aligned_cols=217 Identities=18% Similarity=0.274 Sum_probs=193.4
Q ss_pred ceeeccccccCCCc--cHHHhhhc----------CCCcEEEEecccCCCCCCCHHHHHHHHHHHHhhcCCCcccEEEEec
Q 022300 17 PITMGLLKISMASS--SIEFVERG----------HQSSWISLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHW 84 (299)
Q Consensus 17 ~~~~g~~~~~~ag~--sE~~lg~~----------~R~~i~I~tK~~~~~~~~~~~~i~~~ve~SL~~Lg~d~iDl~~lH~ 84 (299)
.++.|++.||+|.. +|+.+|++ .|++++|+||+++ .+.+++.+++++++||++||+||||+|++||
T Consensus 48 Al~~Gi~~~DTA~~Yg~E~~vG~al~~~~~~~~~~R~~v~I~TK~~~--~~~~~~~v~~~~~~SL~rLg~dyiDl~llH~ 125 (298)
T 1vp5_A 48 AIKVGYRLIDTAASYMNEEGVGRAIKRAIDEGIVRREELFVTTKLWV--SDVGYESTKKAFEKSLKKLQLEYIDLYLIHQ 125 (298)
T ss_dssp HHHHTCCEEECCGGGTCHHHHHHHHHHHHHTTSCCGGGCEEEEEECG--GGCSSHHHHHHHHHHHHHHTCSCEEEEEECS
T ss_pred HHHcCCCEEECCCcccCHHHHHHHHHHhhhccCCChhhEEEEeccCC--CCCCHHHHHHHHHHHHHHHCCCcEEEEEecC
Confidence 36778999998753 79999986 3899999999976 3567899999999999999999999999999
Q ss_pred CCCCCCcHHHHHHHHHHHHHcCcccEEEecCCCHHHHHHHHHc-CCCeeEeeecccccccChhhHHHHHHHHhCCeEEEc
Q 022300 85 WDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-GIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITY 163 (299)
Q Consensus 85 pd~~~~~~~~~~~~L~~l~~~Gkir~iGvs~~~~~~l~~~~~~-~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~~~ 163 (299)
|+. + ..++|++|++|+++||||+||||||++++++++++. +++|+++|++||++++. .+++++|+++||++++|
T Consensus 126 p~~--~-~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~p~v~Q~~~~~~~~~--~~l~~~~~~~gI~v~a~ 200 (298)
T 1vp5_A 126 PFG--D-VHCAWKAMEEMYKDGLVRAIGVSNFYPDRLMDLMVHHEIVPAVNQIEIHPFYQR--QEEIEFMRNYNIQPEAW 200 (298)
T ss_dssp SCS--C-HHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHCSSCCSEEEEECBTTBCC--HHHHHHHHHTTCEEEEE
T ss_pred CCC--C-HHHHHHHHHHHHHcCCccEEEecCCCHHHHHHHHHhCCCCceEEEEecccccCC--HHHHHHHHHCCCEEEEe
Confidence 976 4 889999999999999999999999999999999987 67899999999998876 47999999999999999
Q ss_pred ccccccccCCcccCCCCCCCCCCCCCCCchhHHHHhhhhhcCCchHHHHHHHHHHHHHHHhCCCHHHHHHHHHHhCCCCc
Q 022300 164 GTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASKHGVSIPVVAVRYILDQPAVA 243 (299)
Q Consensus 164 ~pl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~la~~~~~s~aq~al~~~l~~~~v~ 243 (299)
+||++|. +++.. .+.+.++|+++|+|++|+||+|+++++ +
T Consensus 201 spL~~G~--~~~l~------------------------------------~~~l~~ia~~~g~s~aqvaL~w~l~~~-v- 240 (298)
T 1vp5_A 201 GPFAEGR--KNIFQ------------------------------------NGVLRSIAEKYGKTVAQVILRWLTQKG-I- 240 (298)
T ss_dssp STTGGGG--GGGGG------------------------------------CHHHHHHHHHHTCCHHHHHHHHHHHTT-C-
T ss_pred cccccCC--ccccC------------------------------------cHHHHHHHHHhCCCHHHHHHHHHHhCC-C-
Confidence 9999983 11111 167899999999999999999999997 4
Q ss_pred eeeeccCCCCHHHHHHhHhhhcCCCCHHHHHHHHHHHhc
Q 022300 244 GSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKK 282 (299)
Q Consensus 244 ~~i~g~~~~~~e~l~enl~a~~~~Lt~e~~~~i~~~~~~ 282 (299)
++|+|++ +++||++|+++++++||+++++.|+++.+.
T Consensus 241 ~vI~g~~--~~~~l~enl~a~~~~Ls~e~~~~l~~~~~~ 277 (298)
T 1vp5_A 241 VAIPKTV--RRERMKENISIFDFELTQEDMEKIATLDEG 277 (298)
T ss_dssp EECCCCS--CHHHHHHHHCCSSCCCCHHHHHHHHTTCCS
T ss_pred EEEeCCC--CHHHHHHHHhhcCCCCCHHHHHHHHHhhcc
Confidence 7899999 999999999999999999999999998654
No 28
>4gie_A Prostaglandin F synthase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: NAP; 1.25A {Trypanosoma cruzi} PDB: 4fzi_A*
Probab=100.00 E-value=3e-46 Score=335.47 Aligned_cols=219 Identities=21% Similarity=0.315 Sum_probs=195.8
Q ss_pred ceeeccccccCCCc--cHHHhhhc------CCCcEEEEecccCCCCCCCHHHHHHHHHHHHhhcCCCcccEEEEecCCCC
Q 022300 17 PITMGLLKISMASS--SIEFVERG------HQSSWISLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYS 88 (299)
Q Consensus 17 ~~~~g~~~~~~ag~--sE~~lg~~------~R~~i~I~tK~~~~~~~~~~~~i~~~ve~SL~~Lg~d~iDl~~lH~pd~~ 88 (299)
.++.|++.||+|-. +|+.+|++ .|++++|+||++. ...+++.+++++++||++|||||||+|++|||+..
T Consensus 47 Al~~Gin~~DTA~~YgsE~~vG~~l~~~~~~r~~~~i~tk~~~--~~~~~~~~~~~~e~SL~rL~~dyiDly~lH~p~~~ 124 (290)
T 4gie_A 47 AIEAGYRHIDTAYIYSNERGVGQGIRESGVPREEVWVTTKVWN--SDQGYEKTLAAFERSRELLGLEYIDLYLIHWPGKK 124 (290)
T ss_dssp HHHHTCCEEECCGGGTCHHHHHHHHHHHCCCGGGSEEEEEECG--GGCSHHHHHHHHHHHHHHHTCSCEEEEEECCCCSS
T ss_pred HHHcCCCEEecccccCCHHHHHHHHHhcCCcchhccccccccc--cCCChHHHHHHHHHHHHHhCCCceeeEEecCCCCC
Confidence 47789999999863 89999987 4889999999976 45679999999999999999999999999998754
Q ss_pred CCcHHHHHHHHHHHHHcCcccEEEecCCCHHHHHHHHHc-CCCeeEeeecccccccChhhHHHHHHHHhCCeEEEccccc
Q 022300 89 NPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-GIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYGTVM 167 (299)
Q Consensus 89 ~~~~~~~~~~L~~l~~~Gkir~iGvs~~~~~~l~~~~~~-~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~~~~pl~ 167 (299)
+ ..++|++|++|+++||||+||||||+.+++.++... .+.+.++|+++++... +.+++++|+++||++++|+||+
T Consensus 125 -~-~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~q~~~~~~~~--~~~l~~~~~~~gi~~~a~spl~ 200 (290)
T 4gie_A 125 -K-FVDTWKALEKLYEEKKVRAIGVSNFEPHHLTELFKSCKIRPMVNQVELHPLFQ--QRTLREFCKQHNIAITAWSPLG 200 (290)
T ss_dssp -S-HHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHTTCSSCCSEEEEECBTTBC--CHHHHHHHHHTTCEEEEESTTC
T ss_pred -c-chHHHHHHHHHHHCCCcceeeecCCCHHHHHHHHHhccCCCceeeEeccccch--hHHHHHHHHHcCceEeeecccc
Confidence 4 789999999999999999999999999999999887 6778888988887544 4679999999999999999999
Q ss_pred ccccCCcccCCCCCCCCCCCCCCCchhHHHHhhhhhcCCchHHHHHHHHHHHHHHHhCCCHHHHHHHHHHhCCCCceeee
Q 022300 168 GGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASKHGVSIPVVAVRYILDQPAVAGSMI 247 (299)
Q Consensus 168 ~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~la~~~~~s~aq~al~~~l~~~~v~~~i~ 247 (299)
+|.|++.+.. +.+.++|+++|+|++|+||+|+++++.| +|+
T Consensus 201 ~G~l~~~~~~-------------------------------------~~l~~iA~~~g~t~aqvaL~w~l~~~~v--~I~ 241 (290)
T 4gie_A 201 SGEEAGILKN-------------------------------------HVLGEIAKKHNKSPAQVVIRWDIQHGIV--TIP 241 (290)
T ss_dssp SSGGGCGGGC-------------------------------------HHHHHHHHHHTCCHHHHHHHHHHHTTCE--ECC
T ss_pred cccccccchh-------------------------------------HHHHHHHHHhCCCHHHHHHHHHHhCCCE--EEE
Confidence 9998764443 6789999999999999999999999965 799
Q ss_pred ccCCCCHHHHHHhHhhhcCCCCHHHHHHHHHHHhc
Q 022300 248 GVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKK 282 (299)
Q Consensus 248 g~~~~~~e~l~enl~a~~~~Lt~e~~~~i~~~~~~ 282 (299)
|++ +++||++|+++++++||+||++.|+++.+.
T Consensus 242 G~~--~~~~l~eNl~a~~~~Ls~ee~~~ld~l~~~ 274 (290)
T 4gie_A 242 KST--NKGRIQENFNVWDFKLTEEEMRQIDELNED 274 (290)
T ss_dssp BCC--SHHHHHHHHCCSSCCCCHHHHHHHHTTCCC
T ss_pred CCC--CHHHHHHHHhhcCCCCCHHHHHHHhccCCC
Confidence 999 999999999999999999999999998543
No 29
>1afs_A 3-alpha-HSD, 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, NAD; HET: NAP TES; 2.50A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 1lwi_A*
Probab=100.00 E-value=2.7e-46 Score=340.69 Aligned_cols=230 Identities=20% Similarity=0.297 Sum_probs=196.8
Q ss_pred ceeeccccccCCCc--cHHHhhhc----------CCCcEEEEecccCCCCCCCHHHHHHHHHHHHhhcCCCcccEEEEec
Q 022300 17 PITMGLLKISMASS--SIEFVERG----------HQSSWISLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHW 84 (299)
Q Consensus 17 ~~~~g~~~~~~ag~--sE~~lg~~----------~R~~i~I~tK~~~~~~~~~~~~i~~~ve~SL~~Lg~d~iDl~~lH~ 84 (299)
.++.|++.||+|.. +|+.+|++ .|++++|+||+++ ...+++.+++++++||++||+||||+|++||
T Consensus 41 Al~~G~~~iDTA~~Yg~E~~vG~al~~~~~~g~~~R~~~~I~TK~~~--~~~~~~~v~~~~~~SL~rLg~dyiDl~llH~ 118 (323)
T 1afs_A 41 AIDNGFRHFDSAYLYEVEEEVGQAIRSKIEDGTVKREDIFYTSKLWS--TFHRPELVRTCLEKTLKSTQLDYVDLYIIHF 118 (323)
T ss_dssp HHHTTCCEEECCTTTTCHHHHHHHHHHHHHTTSCCGGGCEEEEEECG--GGCSTTTHHHHHHHHHHHHCCSSEEEEEESC
T ss_pred HHHcCCCEEECcccccCHHHHHHHHHHHHhcCCCChHHeEEEEecCC--CcCCHHHHHHHHHHHHHHhCCCceeEEEecC
Confidence 46788899998753 79999976 4899999999976 3457899999999999999999999999999
Q ss_pred CCCC------------------CCcHHHHHHHHHHHHHcCcccEEEecCCCHHHHHHHHHc-CC--CeeEeeeccccccc
Q 022300 85 WDYS------------------NPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-GI--PVVSNQVQHSVVDM 143 (299)
Q Consensus 85 pd~~------------------~~~~~~~~~~L~~l~~~Gkir~iGvs~~~~~~l~~~~~~-~~--~~~~~q~~~n~~~~ 143 (299)
|+.. ...++++|++|++|+++||||+||||||+.++++++++. .+ +|+++|++||++.+
T Consensus 119 p~~~~~~~~~~~~d~~~~~~~~~~~~~e~~~ale~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~p~~~Q~~~~~~~~ 198 (323)
T 1afs_A 119 PMALQPGDIFFPRDEHGKLLFETVDICDTWEAMEKCKDAGLAKSIGVSNFNCRQLERILNKPGLKYKPVCNQVECHLYLN 198 (323)
T ss_dssp SCEECSSSSSSCBCTTCCBCEECCCHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHTCTTCCSCCSEEEEECBTTBC
T ss_pred cCcCCCCcccCcccccccccccCCCHHHHHHHHHHHHHcCCcCEEEeeCCCHHHHHHHHHhcCcCCCCEEEeeccccccc
Confidence 9421 113789999999999999999999999999999999987 56 88999999999876
Q ss_pred ChhhHHHHHHHHhCCeEEEcccccccccCCcccCCCCCCCCCCCCCCCchhHHHHhhhhhcCCchHHHHHHHHHHHHHHH
Q 022300 144 RPQQKMAELCQLTGVKLITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASK 223 (299)
Q Consensus 144 ~~~~~~~~~~~~~gi~v~~~~pl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~la~~ 223 (299)
. .+++++|+++||++++|+||++|.|++ +.... .+ ..+. .+.+.++|++
T Consensus 199 ~--~~l~~~~~~~gI~v~a~spL~~G~l~~-~~~~~--~~------------------------~~~~--~~~l~~ia~~ 247 (323)
T 1afs_A 199 Q--SKMLDYCKSKDIILVSYCTLGSSRDKT-WVDQK--SP------------------------VLLD--DPVLCAIAKK 247 (323)
T ss_dssp C--HHHHHHHHHHTCEEEEESTTSCCCCTT-TSCTT--SC------------------------CGGG--CHHHHHHHHH
T ss_pred h--HHHHHHHHHcCCEEEEecCccCCcccc-ccccC--Cc------------------------chhc--CHHHHHHHHH
Confidence 5 479999999999999999999999875 32210 00 0000 2788999999
Q ss_pred hCCCHHHHHHHHHHhCCCCceeeeccCCCCHHHHHHhHhhhcCCCCHHHHHHHHHHHhcC
Q 022300 224 HGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKKG 283 (299)
Q Consensus 224 ~~~s~aq~al~~~l~~~~v~~~i~g~~~~~~e~l~enl~a~~~~Lt~e~~~~i~~~~~~~ 283 (299)
+|+|++|+||+|+++++ .++|+|++ +++||++|+++++++||+++++.|+++.+..
T Consensus 248 ~g~s~aqvaL~w~l~~~--~~vI~g~~--~~~~l~en~~~~~~~L~~e~~~~l~~~~~~~ 303 (323)
T 1afs_A 248 YKQTPALVALRYQLQRG--VVPLIRSF--NAKRIKELTQVFEFQLASEDMKALDGLNRNF 303 (323)
T ss_dssp TTCCHHHHHHHHHHHTT--CEEEECCS--CHHHHHHHTTTTSCCCCHHHHHHHHTTCCCC
T ss_pred hCCCHHHHHHHHHHhCC--CEEeeCCC--CHHHHHHHHhhccCCCCHHHHHHHHhhcccC
Confidence 99999999999999998 37899999 9999999999999999999999999986543
No 30
>1mzr_A 2,5-diketo-D-gluconate reductase A; alpha/beta-barrel, aldo-ketoreductase, NADPH dependant, BACT targets at IGS-CNRS, france, BIGS; 2.13A {Escherichia coli} SCOP: c.1.7.1
Probab=100.00 E-value=2.3e-46 Score=336.61 Aligned_cols=217 Identities=18% Similarity=0.334 Sum_probs=191.9
Q ss_pred eeeccccccCCCc--cHHHhhhc------CCCcEEEEecccCCCCCCCHHHHHHHHHHHHhhcCCCcccEEEEecCCCC-
Q 022300 18 ITMGLLKISMASS--SIEFVERG------HQSSWISLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYS- 88 (299)
Q Consensus 18 ~~~g~~~~~~ag~--sE~~lg~~------~R~~i~I~tK~~~~~~~~~~~~i~~~ve~SL~~Lg~d~iDl~~lH~pd~~- 88 (299)
++.|++.||+|.. +|+.+|++ .|++++|+||+++. +. +.+++++++||++||+||||+|++|||+..
T Consensus 59 l~~Gi~~~DTA~~Yg~E~~vG~al~~~~~~R~~v~I~TK~~~~--~~--~~v~~~~e~SL~rLg~dyiDl~llH~p~~~~ 134 (296)
T 1mzr_A 59 LEVGYRSIDTAAAYKNEEGVGKALKNASVNREELFITTKLWND--DH--KRPREALLDSLKKLQLDYIDLYLMHWPVPAI 134 (296)
T ss_dssp HHHTCCEEECCGGGTCHHHHHHHHHHSCSCGGGCEEEEEECGG--GT--TCHHHHHHHHHHHHTCSCEEEEEESCCCTTT
T ss_pred HHcCCCEEECCccccCHHHHHHHHHhcCCCcccEEEEeccCCC--cH--HHHHHHHHHHHHHhCCCcEEEEEEccCCCCc
Confidence 6678888888753 79999987 48999999999763 22 889999999999999999999999999873
Q ss_pred CCcHHHHHHHHHHHHHcCcccEEEecCCCHHHHHHHHHc-CCCeeEeeecccccccChhhHHHHHHHHhCCeEEEccccc
Q 022300 89 NPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-GIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYGTVM 167 (299)
Q Consensus 89 ~~~~~~~~~~L~~l~~~Gkir~iGvs~~~~~~l~~~~~~-~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~~~~pl~ 167 (299)
.+ ..++|++|++|+++||||+||||||+.++++++++. +++|.++|++||++++. .+++++|+++||++++|+||+
T Consensus 135 ~~-~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~p~v~Q~~~~~~~~~--~~l~~~~~~~gI~v~a~spL~ 211 (296)
T 1mzr_A 135 DH-YVEAWKGMIELQKEGLIKSIGVCNFQIHHLQRLIDETGVTPVINQIELHPLMQQ--RQLHAWNATHKIQTESWSPLA 211 (296)
T ss_dssp CC-HHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHHSCCCSEEEEECBTTBCC--HHHHHHHHHTTCEEEEESTTT
T ss_pred CC-HHHHHHHHHHHHHCCCcCEEEEeCCCHHHHHHHHHhcCCCceEEeeecccccCC--HHHHHHHHHCCCeEEEecccc
Confidence 45 899999999999999999999999999999999886 77899999999998875 479999999999999999999
Q ss_pred ccccCCcccCCCCCCCCCCCCCCCchhHHHHhhhhhcCCchHHHHHHHHHHHHHHHhCCCHHHHHHHHHHhCCCCceeee
Q 022300 168 GGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASKHGVSIPVVAVRYILDQPAVAGSMI 247 (299)
Q Consensus 168 ~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~la~~~~~s~aq~al~~~l~~~~v~~~i~ 247 (299)
+|.+. ... .+.+.++|+++|+|++|+||+|+++++ + ++|+
T Consensus 212 ~G~~~--~l~------------------------------------~~~l~~ia~~~g~s~aqvaL~w~l~~~-v-~vI~ 251 (296)
T 1mzr_A 212 QGGKG--VFD------------------------------------QKVIRDLADKYGKTPAQIVIRWHLDSG-L-VVIP 251 (296)
T ss_dssp TTCTT--TTT------------------------------------SHHHHHHHHHHTCCHHHHHHHHHHHTT-C-EECC
T ss_pred CCcch--hcC------------------------------------hHHHHHHHHHhCCCHHHHHHHHHHhCC-C-EEEe
Confidence 99431 011 167899999999999999999999995 4 6899
Q ss_pred ccCCCCHHHHHHhHhhhcCCCCHHHHHHHHHHHhcC
Q 022300 248 GVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKKG 283 (299)
Q Consensus 248 g~~~~~~e~l~enl~a~~~~Lt~e~~~~i~~~~~~~ 283 (299)
|++ +++||++|+++++++||+++++.|+++.+..
T Consensus 252 g~~--~~~~l~enl~a~~~~Ls~e~~~~l~~~~~~~ 285 (296)
T 1mzr_A 252 KSV--TPSRIAENFDVWDFRLDKDELGEIAKLDQGK 285 (296)
T ss_dssp BCC--CHHHHHHTTCCSSCCCCHHHHHHHHTTCCCC
T ss_pred CCC--CHHHHHHHHhhcCCCCCHHHHHHHHHhhhcC
Confidence 999 9999999999999999999999999986543
No 31
>1s1p_A Aldo-keto reductase family 1 member C3; TIM-barrel, oxidoreductase; HET: NAP; 1.20A {Homo sapiens} SCOP: c.1.7.1 PDB: 1s1r_A* 1s2a_A* 1s2c_A* 3uwe_A* 3r58_A* 3r43_A* 3r7m_A* 3r6i_A* 3r8h_A* 3r94_A* 3r8g_A* 1zq5_A* 1ry8_A* 1xf0_A* 1ry0_A* 2f38_A* 2fgb_A* 4dbs_A* 4dbu_A* 3gug_A* ...
Probab=100.00 E-value=6.8e-46 Score=339.09 Aligned_cols=230 Identities=20% Similarity=0.304 Sum_probs=196.8
Q ss_pred ceeeccccccCCCc--cHHHhhhc----------CCCcEEEEecccCCCCCCCHHHHHHHHHHHHhhcCCCcccEEEEec
Q 022300 17 PITMGLLKISMASS--SIEFVERG----------HQSSWISLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHW 84 (299)
Q Consensus 17 ~~~~g~~~~~~ag~--sE~~lg~~----------~R~~i~I~tK~~~~~~~~~~~~i~~~ve~SL~~Lg~d~iDl~~lH~ 84 (299)
.++.|++.||+|.. +|+.+|++ .|++++|+||+++ ...+++.+++++++||++||+||||+|++||
T Consensus 41 Al~~G~~~iDTA~~Yg~E~~vG~al~~~~~~~~~~R~~~~I~TK~~~--~~~~~~~v~~~~e~SL~rLg~dyiDl~llH~ 118 (331)
T 1s1p_A 41 AIEAGFRHIDSAHLYNNEEQVGLAIRSKIADGSVKREDIFYTSKLWS--TFHRPELVRPALENSLKKAQLDYVDLYLIHS 118 (331)
T ss_dssp HHHHTCCEEECCGGGTCHHHHHHHHHHHHHTTSCCGGGCEEEEEECG--GGCSHHHHHHHHHHHHHHHTCSCEEEEEECC
T ss_pred HHHcCCCEEEccccccCHHHHHHHHHHHHhcCCCCchheEEEeccCC--ccCCHHHHHHHHHHHHHHhCCCcEEEEEecc
Confidence 36778889998853 79999976 4899999999976 3568999999999999999999999999999
Q ss_pred CCCC------------------CCcHHHHHHHHHHHHHcCcccEEEecCCCHHHHHHHHHc-CC--CeeEeeeccccccc
Q 022300 85 WDYS------------------NPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-GI--PVVSNQVQHSVVDM 143 (299)
Q Consensus 85 pd~~------------------~~~~~~~~~~L~~l~~~Gkir~iGvs~~~~~~l~~~~~~-~~--~~~~~q~~~n~~~~ 143 (299)
|+.. ...++++|++|++|+++||||+||||||+.++++++++. ++ +|+++|++||++.+
T Consensus 119 p~~~~~~~~~~~~d~~g~~~~~~~~~~e~~~ale~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~p~v~Q~~~~~~~~ 198 (331)
T 1s1p_A 119 PMSLKPGEELSPTDENGKVIFDIVDLCTTWEAMEKCKDAGLAKSIGVSNFNRRQLEMILNKPGLKYKPVCNQVECHPYFN 198 (331)
T ss_dssp SCCBCCSSCSSCBCTTSCBCBCCCCHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHTCTTCCCCCSEEEEECBTTBC
T ss_pred CcccCCCcccCCccccccccccccCHHHHHHHHHHHHHcCCccEEEEeCCCHHHHHHHHHhcCccCCCceeeeecCCCcC
Confidence 9531 113789999999999999999999999999999999987 56 89999999999876
Q ss_pred ChhhHHHHHHHHhCCeEEEcccccccccCCcccCCCCCCCCCCCCCCCchhHHHHhhhhhcCCchHHHHHHHHHHHHHHH
Q 022300 144 RPQQKMAELCQLTGVKLITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASK 223 (299)
Q Consensus 144 ~~~~~~~~~~~~~gi~v~~~~pl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~la~~ 223 (299)
. .+++++|+++||++++|+||++|.|++ +.... .+ ..+. .+.+.++|++
T Consensus 199 ~--~~l~~~~~~~gI~v~a~spL~~G~l~~-~~~~~--~~------------------------~~~~--~~~l~~ia~~ 247 (331)
T 1s1p_A 199 R--SKLLDFCKSKDIVLVAYSALGSQRDKR-WVDPN--SP------------------------VLLE--DPVLCALAKK 247 (331)
T ss_dssp C--HHHHHHHHHTTCEEEEESTTSCCCCTT-TSCTT--SC------------------------CGGG--CHHHHHHHHH
T ss_pred h--HHHHHHHHHcCCEEEEeccccCCcccc-cccCC--Cc------------------------cccc--CHHHHHHHHH
Confidence 5 479999999999999999999999875 32110 00 0011 2788999999
Q ss_pred hCCCHHHHHHHHHHhCCCCceeeeccCCCCHHHHHHhHhhhcCCCCHHHHHHHHHHHhcC
Q 022300 224 HGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKKG 283 (299)
Q Consensus 224 ~~~s~aq~al~~~l~~~~v~~~i~g~~~~~~e~l~enl~a~~~~Lt~e~~~~i~~~~~~~ 283 (299)
+|+|++|+||+|+++++ + ++|+|++ +++||++|+++++++||+++++.|+++.+..
T Consensus 248 ~g~s~aqvaL~w~l~~~-~-~vI~g~~--~~~~l~en~~~~~~~L~~e~~~~l~~~~~~~ 303 (331)
T 1s1p_A 248 HKRTPALIALRYQLQRG-V-VVLAKSY--NEQRIRQNVQVFEFQLTAEDMKAIDGLDRNL 303 (331)
T ss_dssp HTSCHHHHHHHHHHHTT-C-EEEEECC--SHHHHHHHGGGGGCCCCHHHHHHHHTTCCCC
T ss_pred hCCCHHHHHHHHHHhCC-C-EEeeCCC--CHHHHHHHhhhcCCCcCHHHHHHHHHHhcCC
Confidence 99999999999999998 3 6899999 9999999999999999999999999985543
No 32
>3h7r_A Aldo-keto reductase; stress response, NADP, drought tolerance, oxidoreductase; HET: NAP; 1.40A {Arabidopsis thaliana}
Probab=100.00 E-value=2.3e-46 Score=341.92 Aligned_cols=240 Identities=18% Similarity=0.251 Sum_probs=198.8
Q ss_pred eeeccccccCCCc--cHHHhhhc----------CCCcEEEEecccCCCCCCCHHHHHHHHHHHHhhcCCCcccEEEEecC
Q 022300 18 ITMGLLKISMASS--SIEFVERG----------HQSSWISLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWW 85 (299)
Q Consensus 18 ~~~g~~~~~~ag~--sE~~lg~~----------~R~~i~I~tK~~~~~~~~~~~~i~~~ve~SL~~Lg~d~iDl~~lH~p 85 (299)
++.|++.||+|.. +|+.+|++ .|+++||+||++. .+.+++.+++++++||++||+||||+|++|||
T Consensus 55 l~~Gi~~~DTA~~YgsE~~lG~al~~~~~~g~~~R~~v~I~TK~~~--~~~~~~~i~~~~e~SL~rLg~dyiDl~llH~p 132 (331)
T 3h7r_A 55 IKIGYRHIDCASIYGNEKEIGGVLKKLIGDGFVKREELFITSKLWS--NDHLPEDVPKALEKTLQDLQIDYVDLYLIHWP 132 (331)
T ss_dssp HHHTCCEEECCGGGSCHHHHHHHHHHHHHTTSSCGGGCEEEEEECG--GGCSTTHHHHHHHHHHHHHTCSCBSEEEECCS
T ss_pred HHcCCCEEECccccCCHHHHHHHHHHHhhcCCCCchhEEEEEeeCC--CCCCHHHHHHHHHHHHHHcCCCeeEEEEEecC
Confidence 5678888988752 89999974 5899999999976 45678999999999999999999999999999
Q ss_pred CCC-------------CCcHHHHHHHHHHHHHcCcccEEEecCCCHHHHHHHHHc-CCCeeEeeecccccccChhhHHHH
Q 022300 86 DYS-------------NPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-GIPVVSNQVQHSVVDMRPQQKMAE 151 (299)
Q Consensus 86 d~~-------------~~~~~~~~~~L~~l~~~Gkir~iGvs~~~~~~l~~~~~~-~~~~~~~q~~~n~~~~~~~~~~~~ 151 (299)
+.. ....+++|++|++|+++||||+||||||+.++++++++. .++|+++|++||++.+. .++++
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~e~~~aL~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~--~~l~~ 210 (331)
T 3h7r_A 133 ASLKKESLMPTPEMLTKPDITSTWKAMEALYDSGKARAIGVSNFSSKKLTDLLNVARVTPAVNQVECHPVWQQ--QGLHE 210 (331)
T ss_dssp CEECTTCSSCCGGGEECCCHHHHHHHHHHHHHTTSBSSEEEESCCHHHHHHHHHHCSSCCSEEEEECBTTBCC--HHHHH
T ss_pred cccccccccccccccccCCHHHHHHHHHHHHHcCCCcEEEecCCCHHHHHHHHHhcCCCceeEEeecccccCC--HHHHH
Confidence 642 123789999999999999999999999999999999887 67899999999998775 57999
Q ss_pred HHHHhCCeEEEcccccccccCCcccCCCCCCCCCCCCCCCchhHHHHhhhhhcCCchHHHHHHHHHHHHHHHhCCCHHHH
Q 022300 152 LCQLTGVKLITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASKHGVSIPVV 231 (299)
Q Consensus 152 ~~~~~gi~v~~~~pl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~la~~~~~s~aq~ 231 (299)
+|+++||++++|+||++|-.. +. ....+. .+.+.++|+++|+|++|+
T Consensus 211 ~~~~~gI~v~a~spL~~g~~~--~~-----------------------------~~~~~~--~~~l~~iA~~~g~t~aqv 257 (331)
T 3h7r_A 211 LCKSKGVHLSGYSPLGSQSKG--EV-----------------------------RLKVLQ--NPIVTEVAEKLGKTTAQV 257 (331)
T ss_dssp HHHHHTCEEEEESTTSCSCTT--TT-----------------------------THHHHT--CHHHHHHHHHHTCCHHHH
T ss_pred HHHHCCCEEEEeCCCCCCCCC--CC-----------------------------ccchhc--CHHHHHHHHHHCcCHHHH
Confidence 999999999999999986210 00 000111 278999999999999999
Q ss_pred HHHHHHhCCCCceeeeccCCCCHHHHHHhHhhhcCCCCHHHHHHHHHHHhcCCCCC-cccCCCccccc
Q 022300 232 AVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKKGKDLL-GVIGDCGDEYR 298 (299)
Q Consensus 232 al~~~l~~~~v~~~i~g~~~~~~e~l~enl~a~~~~Lt~e~~~~i~~~~~~~~~~~-~~~~~~~~~~~ 298 (299)
||+|+++++ .++|+|++ +++||++|+++++++||+++++.|+++.++..... .|.....++|+
T Consensus 258 aL~w~l~~~--~~vI~g~~--~~~~l~en~~a~~~~L~~ee~~~l~~l~~~~~~~~~~~~~~~~~~~~ 321 (331)
T 3h7r_A 258 ALRWGLQTG--HSVLPKSS--SGARLKENLDVFDWSIPEDLFTKFSNIPQEKFCRATEFAHETHGFYK 321 (331)
T ss_dssp HHHHHHHTT--CEECCCCS--CHHHHHHHTCCSSCCCCHHHHGGGGGSCCCCSCCCGGGCCTTTCSSC
T ss_pred HHHHHHHCC--CEEEeCCC--CHHHHHHHHhhCCCCcCHHHHHHHHHhhhcCcccCcccccCCCCccc
Confidence 999999998 46899999 99999999999999999999999999865433221 23334445554
No 33
>1mi3_A Xylose reductase, XR; aldo-keto reductase, beta-alpha barrel, dimer, oxidoreductase; HET: NAD; 1.80A {Candida tenuis} SCOP: c.1.7.1 PDB: 1jez_A* 1k8c_A* 1ye6_A* 1ye4_A* 1sm9_A* 1r38_A* 1z9a_A*
Probab=100.00 E-value=7.6e-46 Score=337.69 Aligned_cols=232 Identities=20% Similarity=0.230 Sum_probs=193.7
Q ss_pred ceeeccccccCCCc--cHHHhhhc----------CCCcEEEEecccCCCCCCCHHHHHHHHHHHHhhcCCCcccEEEEec
Q 022300 17 PITMGLLKISMASS--SIEFVERG----------HQSSWISLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHW 84 (299)
Q Consensus 17 ~~~~g~~~~~~ag~--sE~~lg~~----------~R~~i~I~tK~~~~~~~~~~~~i~~~ve~SL~~Lg~d~iDl~~lH~ 84 (299)
.++.|++.||+|.. +|+.+|++ .|++++|+||+++ ...+++.+++++++||++||+||||+|++||
T Consensus 38 Al~~G~~~iDTA~~Yg~E~~vG~al~~~~~~g~~~R~~~~i~TK~~~--~~~~~~~v~~~~~~SL~rL~~dyiDl~llH~ 115 (322)
T 1mi3_A 38 AIKAGYRLFDGAEDYGNEKEVGDGVKRAIDEGLVKREEIFLTSKLWN--NYHDPKNVETALNKTLADLKVDYVDLFLIHF 115 (322)
T ss_dssp HHHTTCCEEECCGGGSCHHHHHHHHHHHHHTTSCCGGGCEEEEEECG--GGCSHHHHHHHHHHHHHHHTCSCEEEEEECC
T ss_pred HHHcCCCEEEccccccCHHHHHHHHHHHhhcCCCChhhEEEEEeeCC--CCCCHHHHHHHHHHHHHHhCCCCeeeEEEec
Confidence 36678888998753 79999976 4899999999976 3568999999999999999999999999999
Q ss_pred CCCC------------------------CCcHHHHHHHHHHHHHcCcccEEEecCCCHHHHHHHHHc-CCCeeEeeeccc
Q 022300 85 WDYS------------------------NPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-GIPVVSNQVQHS 139 (299)
Q Consensus 85 pd~~------------------------~~~~~~~~~~L~~l~~~Gkir~iGvs~~~~~~l~~~~~~-~~~~~~~q~~~n 139 (299)
|+.. ...++++|++|++|+++||||+||||||+.++++++++. +++|+++|++||
T Consensus 116 p~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~Q~~~~ 195 (322)
T 1mi3_A 116 PIAFKFVPIEEKYPPGFYCGDGNNFVYEDVPILETWKALEKLVAAGKIKSIGVSNFPGALLLDLLRGATIKPAVLQVEHH 195 (322)
T ss_dssp SCCBCCCCTTTCSSCTTCCSSTTCCCBCCCCHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHCSSCCCEEEEECB
T ss_pred CcccccCcccccccccccccccccccccCCCHHHHHHHHHHHHHcCCcCEEEEcCCCHHHHHHHHHhCCCCceEeecccC
Confidence 9531 113789999999999999999999999999999999887 678999999999
Q ss_pred ccccChhhHHHHHHHHhCCeEEEcccccccccCCcccCCCCCCCCCCCCCCCchhHHHHhhhhhcCCchHHHHHHHHHHH
Q 022300 140 VVDMRPQQKMAELCQLTGVKLITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKR 219 (299)
Q Consensus 140 ~~~~~~~~~~~~~~~~~gi~v~~~~pl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 219 (299)
++.+. .+++++|+++||++++|+||++|.+.. .+ . ... . ..+..+. .+.+.+
T Consensus 196 ~~~~~--~~l~~~~~~~gi~v~a~spL~~G~~~~----~~-------~-----~~~---~-----~~~~~~~--~~~l~~ 247 (322)
T 1mi3_A 196 PYLQQ--PKLIEFAQKAGVTITAYSSFGPQSFVE----MN-------Q-----GRA---L-----NTPTLFA--HDTIKA 247 (322)
T ss_dssp TTBCC--HHHHHHHHHTTCEEEEECTTTTHHHHT----TT-------C-----HHH---H-----TSCCTTS--CHHHHH
T ss_pred cCcCc--HHHHHHHHHcCCEEEEECCCCCCCccc----cc-------c-----ccc---c-----cCccccc--CHHHHH
Confidence 98764 579999999999999999999994321 00 0 000 0 0000011 277899
Q ss_pred HHHHhCCCHHHHHHHHHHhCCCCceeeeccCCCCHHHHHHhHhhhcCCCCHHHHHHHHHHHhc
Q 022300 220 IASKHGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKK 282 (299)
Q Consensus 220 la~~~~~s~aq~al~~~l~~~~v~~~i~g~~~~~~e~l~enl~a~~~~Lt~e~~~~i~~~~~~ 282 (299)
+|+++|+|++|+||+|+++++ + ++|+|++ +++||++|+++++++||+++++.|+++.+.
T Consensus 248 iA~~~g~t~aqvaL~w~l~~~-~-~vI~g~~--~~~~l~en~~~~~~~L~~e~~~~l~~~~~~ 306 (322)
T 1mi3_A 248 IAAKYNKTPAEVLLRWAAQRG-I-AVIPKSN--LPERLVQNRSFNTFDLTKEDFEEIAKLDIG 306 (322)
T ss_dssp HHHHHTCCHHHHHHHHHHTTT-C-EECCCCC--SHHHHHHTTSCCSSCCCHHHHHHHHTTCCC
T ss_pred HHHHcCCCHHHHHHHHHHhCC-C-EEEcCCC--CHHHHHHHHhhcCCCcCHHHHHHHHhhccc
Confidence 999999999999999999998 4 7999999 999999999999999999999999998543
No 34
>3h7u_A Aldo-keto reductase; stress response, NADP, drought tolerance, oxidoreductase; HET: NAP; 1.25A {Arabidopsis thaliana}
Probab=100.00 E-value=7.7e-46 Score=339.10 Aligned_cols=226 Identities=19% Similarity=0.272 Sum_probs=193.7
Q ss_pred ceeeccccccCCCc--cHHHhhhc----------CCCcEEEEecccCCCCCCCHHHHHHHHHHHHhhcCCCcccEEEEec
Q 022300 17 PITMGLLKISMASS--SIEFVERG----------HQSSWISLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHW 84 (299)
Q Consensus 17 ~~~~g~~~~~~ag~--sE~~lg~~----------~R~~i~I~tK~~~~~~~~~~~~i~~~ve~SL~~Lg~d~iDl~~lH~ 84 (299)
.++.|++.||+|.. +|+.+|++ .|+++||+||++. ...+++.+++++++||++||+||||+|++||
T Consensus 58 Al~~Gi~~~DTA~~YgsE~~lG~al~~~~~~g~~~R~~v~I~TK~~~--~~~~~~~v~~~~e~SL~rLg~dyiDl~llH~ 135 (335)
T 3h7u_A 58 AVKIGYRHIDCAQIYGNEKEIGAVLKKLFEDRVVKREDLFITSKLWC--TDHDPQDVPEALNRTLKDLQLEYVDLYLIHW 135 (335)
T ss_dssp HHHHTCCEEECCGGGSCHHHHHHHHHHHHHTTSCCGGGCEEEEEECG--GGCSTTHHHHHHHHHHHHHTCSCBSEEEECS
T ss_pred HHHcCCCEEECCcccCCHHHHHHHHHHHHhcCCCCcceeEEEeeeCC--CCCCHHHHHHHHHHHHHHcCCCceeEEEEcC
Confidence 35678888888752 89999975 5899999999976 4567899999999999999999999999999
Q ss_pred CCCCC-------------CcHHHHHHHHHHHHHcCcccEEEecCCCHHHHHHHHHc-CCCeeEeeecccccccChhhHHH
Q 022300 85 WDYSN-------------PGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-GIPVVSNQVQHSVVDMRPQQKMA 150 (299)
Q Consensus 85 pd~~~-------------~~~~~~~~~L~~l~~~Gkir~iGvs~~~~~~l~~~~~~-~~~~~~~q~~~n~~~~~~~~~~~ 150 (299)
|+... ...+++|++|++|+++||||+||||||+.++++++++. .++|+++|++||++.+. .+++
T Consensus 136 p~~~~~~~~~~~~~~~~~~~~~e~~~aL~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~--~~l~ 213 (335)
T 3h7u_A 136 PARIKKGSVGIKPENLLPVDIPSTWKAMEALYDSGKARAIGVSNFSTKKLADLLELARVPPAVNQVECHPSWRQ--TKLQ 213 (335)
T ss_dssp SCEECSSCSSCCGGGEECCCHHHHHHHHHHHHHTTSBSSEEEESCCHHHHHHHHHHCSSCCSEEEEECBTTBCC--HHHH
T ss_pred CCccccccccccccccccCCHHHHHHHHHHHHHcCCccEEEecCCCHHHHHHHHHhCCCCeEEEecccccccCC--HHHH
Confidence 96421 12789999999999999999999999999999999886 67899999999998875 5799
Q ss_pred HHHHHhCCeEEEcccccccccCCcccCCCCCCCCCCCCCCCchhHHHHhhhhhcCCchHHHHHHHHHHHHHHHhCCCHHH
Q 022300 151 ELCQLTGVKLITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASKHGVSIPV 230 (299)
Q Consensus 151 ~~~~~~gi~v~~~~pl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~la~~~~~s~aq 230 (299)
++|+++||++++|+||++|.+. +... +.+. .+.+.++|+++|+|++|
T Consensus 214 ~~~~~~gI~v~a~sPL~~g~~~--~~~~-----------------------------~~~~--~~~l~~iA~~~g~t~aq 260 (335)
T 3h7u_A 214 EFCKSKGVHLSAYSPLGSPGTT--WLKS-----------------------------DVLK--NPILNMVAEKLGKSPAQ 260 (335)
T ss_dssp HHHHHHTCEEEEESTTCCTTCT--TSCC-----------------------------CGGG--CHHHHHHHHHHTCCHHH
T ss_pred HHHHHCCCEEEEeccCcCCCCC--CCCc-----------------------------cccc--cHHHHHHHHHHCcCHHH
Confidence 9999999999999999976321 0000 0000 27889999999999999
Q ss_pred HHHHHHHhCCCCceeeeccCCCCHHHHHHhHhhhcCCCCHHHHHHHHHHHhcC
Q 022300 231 VAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKKG 283 (299)
Q Consensus 231 ~al~~~l~~~~v~~~i~g~~~~~~e~l~enl~a~~~~Lt~e~~~~i~~~~~~~ 283 (299)
+||+|+++++ .++|+|++ +++||++|+++++++||+++++.|+++.+..
T Consensus 261 vaL~w~l~~~--~~vI~g~~--~~~~l~enl~a~~~~L~~e~~~~i~~l~~~~ 309 (335)
T 3h7u_A 261 VALRWGLQMG--HSVLPKST--NEGRIKENFNVFDWSIPDYMFAKFAEIEQAR 309 (335)
T ss_dssp HHHHHHHHTT--CEECCBCS--CHHHHHHHHCCSSCCCCHHHHHHGGGSCCCC
T ss_pred HHHHHHHHCC--CEEEeCCC--CHHHHHHHHhhCCCCcCHHHHHHHHhHhhcC
Confidence 9999999998 57899999 9999999999999999999999999985443
No 35
>1zgd_A Chalcone reductase; polyketide, deoxychalcone, isoflavonoid, biosynthesis, plant protein; HET: NAP; 1.70A {Medicago sativa}
Probab=100.00 E-value=5.3e-46 Score=337.27 Aligned_cols=223 Identities=20% Similarity=0.301 Sum_probs=193.8
Q ss_pred ceeeccccccCCCc--cHHHhhhc----------CCCcEEEEecccCCCCCCCHHHHHHHHHHHHhhcCCCcccEEEEec
Q 022300 17 PITMGLLKISMASS--SIEFVERG----------HQSSWISLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHW 84 (299)
Q Consensus 17 ~~~~g~~~~~~ag~--sE~~lg~~----------~R~~i~I~tK~~~~~~~~~~~~i~~~ve~SL~~Lg~d~iDl~~lH~ 84 (299)
.+..|++.||+|.. +|+.+|++ .|++++|+||++. ...+++.+++++++||++||+||||+|++||
T Consensus 44 Al~~G~~~iDTA~~YgsE~~vG~al~~~~~~g~~~R~~~~i~TK~~~--~~~~~~~v~~~~~~SL~rL~~dyiDl~llH~ 121 (312)
T 1zgd_A 44 AIKQGYRHFDTAAAYGSEQALGEALKEAIELGLVTRDDLFVTSKLWV--TENHPHLVIPALQKSLKTLQLDYLDLYLIHW 121 (312)
T ss_dssp HHHHTCCEEECCGGGTCHHHHHHHHHHHHHTTSCCGGGCEEEEEECG--GGCSGGGHHHHHHHHHHHHTCSCBSEEEECC
T ss_pred HHHcCCCEEECccccCCHHHHHHHHHHHHhcCCCcchheEEEeccCC--CCCCHHHHHHHHHHHHHHhCCCceeEEEEec
Confidence 36678888888752 89999976 4899999999976 3567999999999999999999999999999
Q ss_pred CCCC----------------CCcHHHHHHHHHHHHHcCcccEEEecCCCHHHHHHHHHc-CCCeeEeeecccccccChhh
Q 022300 85 WDYS----------------NPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-GIPVVSNQVQHSVVDMRPQQ 147 (299)
Q Consensus 85 pd~~----------------~~~~~~~~~~L~~l~~~Gkir~iGvs~~~~~~l~~~~~~-~~~~~~~q~~~n~~~~~~~~ 147 (299)
|+.. .+ .+++|++|++|+++||||+||||||+.++++++++. .++|+++|++||++++. .
T Consensus 122 p~~~~~~~~~~~~~~~~~~~~~-~~e~~~ale~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~p~~~Q~~~~~~~~~--~ 198 (312)
T 1zgd_A 122 PLSSQPGKFSFPIDVADLLPFD-VKGVWESMEESLKLGLTKAIGVSNFSVKKLENLLSVATVLPAVNQVEMNLAWQQ--K 198 (312)
T ss_dssp SCEECTTCCCSSEEGGGEECCC-HHHHHHHHHHHHHTTSBSCEEEESCCHHHHHHHHTTCSSCCSEEEEECBTTBCC--H
T ss_pred cCcccCcccccccccccccccc-HHHHHHHHHHHHHcCCCCEEEEeCCCHHHHHHHHHhCCCCceEEeeecCcccCC--H
Confidence 9641 23 789999999999999999999999999999999887 57899999999998875 5
Q ss_pred HHHHHHHHhCCeEEEcccccccccCCcccCCCCCCCCCCCCCCCchhHHHHhhhhhcCCchHHHHHHHHHHHHHHHhCCC
Q 022300 148 KMAELCQLTGVKLITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASKHGVS 227 (299)
Q Consensus 148 ~~~~~~~~~gi~v~~~~pl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~la~~~~~s 227 (299)
+++++|+++||++++|+||++|.+.+.. + .+. .+.+.++|+++|+|
T Consensus 199 ~l~~~~~~~gi~v~a~spl~~G~~~~~~-------~-------------------------~~~--~~~l~~ia~~~g~s 244 (312)
T 1zgd_A 199 KLREFCNAHGIVLTAFSPVRKGASRGPN-------E-------------------------VME--NDMLKEIADAHGKS 244 (312)
T ss_dssp HHHHHHHHTTCEEEEESTTTTTTTTSSC-------T-------------------------TTT--CHHHHHHHHHHTSC
T ss_pred HHHHHHHHcCCEEEEecCCCCCCCCCCc-------c-------------------------ccc--cHHHHHHHHHcCCC
Confidence 7999999999999999999988643200 0 000 16789999999999
Q ss_pred HHHHHHHHHHhCCCCceeeeccCCCCHHHHHHhHhhhcCCCCHHHHHHHHHHHhc
Q 022300 228 IPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKK 282 (299)
Q Consensus 228 ~aq~al~~~l~~~~v~~~i~g~~~~~~e~l~enl~a~~~~Lt~e~~~~i~~~~~~ 282 (299)
++|+||+|+++++ + ++|+|++ +++||++|+++++++||+++++.|+++...
T Consensus 245 ~aqvaL~w~l~~~-~-~~I~g~~--~~~~l~en~~~~~~~L~~e~~~~l~~~~~~ 295 (312)
T 1zgd_A 245 VAQISLRWLYEQG-V-TFVPKSY--DKERMNQNLRIFDWSLTKEDHEKIAQIKQN 295 (312)
T ss_dssp HHHHHHHHHHHTT-C-EECCCCC--SHHHHHHTTCCSSCCCCHHHHHHHTTSCCC
T ss_pred HHHHHHHHHHHCC-C-EEEeCCC--CHHHHHHHHHhccCCCCHHHHHHHHHHhcc
Confidence 9999999999996 4 6999999 999999999999999999999999988543
No 36
>3krb_A Aldose reductase; ssgcid, SBRI, emerald biostructures, university of washingto niaid, oxidoreductase, S genomics; HET: NAP; 1.75A {Giardia lamblia}
Probab=100.00 E-value=1e-45 Score=338.23 Aligned_cols=230 Identities=20% Similarity=0.261 Sum_probs=193.7
Q ss_pred ceeeccccccCCCc--cHHHhhhc------------CCCcEEEEecccCCCCCCCHHHHHHHHHHHHhhcCCCcccEEEE
Q 022300 17 PITMGLLKISMASS--SIEFVERG------------HQSSWISLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQF 82 (299)
Q Consensus 17 ~~~~g~~~~~~ag~--sE~~lg~~------------~R~~i~I~tK~~~~~~~~~~~~i~~~ve~SL~~Lg~d~iDl~~l 82 (299)
.++.|++.||+|.. +|+.+|++ .|+++||+||+++ ...+++.+++++++||++||+||||+|++
T Consensus 47 Al~~Gi~~~DTA~~YgsE~~vG~al~~~~~~~~~g~~R~~v~I~TK~~~--~~~~~~~v~~~~e~SL~rLg~dyiDl~ll 124 (334)
T 3krb_A 47 ALMTGYRHIDCAYVYQNEEAIGRAFGKIFKDASSGIKREDVWITSKLWN--YNHRPELVREQCKKTMSDLQVDYLDLFLV 124 (334)
T ss_dssp HHHHTCCEEECCGGGSCHHHHHHHHHHHHHCTTSSCCGGGCEEEEEECG--GGCSGGGHHHHHHHHHHHHTCSCEEEEEE
T ss_pred HHHcCCCEEECcccccCHHHHHHHHHHHhhhccCCCChhhEEEEeeeCC--CCCCHHHHHHHHHHHHHHcCCCceeEEEE
Confidence 36778899998753 89999963 5889999999986 34679999999999999999999999999
Q ss_pred ecCCCC---------------------CCcHHHHHHHHHHHHHcCcccEEEecCCCHHHHHHHHHc-CCCeeEeeecccc
Q 022300 83 HWWDYS---------------------NPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-GIPVVSNQVQHSV 140 (299)
Q Consensus 83 H~pd~~---------------------~~~~~~~~~~L~~l~~~Gkir~iGvs~~~~~~l~~~~~~-~~~~~~~q~~~n~ 140 (299)
|||+.. .+ .+++|++|++|+++||||+||||||+.++++++++. +++|+++|++||+
T Consensus 125 H~p~~~~~~~~~~~~~~d~~g~~~~~~~~-~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~Q~~~~~ 203 (334)
T 3krb_A 125 HWPLAFVRNDVGDLFPKDAEGRAMLEKVP-LADTWRAMEQLVEEGLVKHIGVSNYTVPLLADLLNYAKIKPLVNQIEIHP 203 (334)
T ss_dssp CCSCCBCCCTTCCSSCBCTTSCBCBCCCC-HHHHHHHHHHHHHHTSEEEEEEESCCHHHHHHHHHHCSSCCSEEEEECBT
T ss_pred ccccccccccccccCcccccccccccCCC-HHHHHHHHHHHHHcCCccEEEEecCCHHHHHHHHHhCCCceEEeeeecCc
Confidence 999431 23 789999999999999999999999999999999887 6789999999999
Q ss_pred cccChhhHHHHHHHHhCCeEEEcccccccccCCcccCCCCCCCCCCCCCCCchhHHHHhhhhhcCCchHHHHHHHHHHHH
Q 022300 141 VDMRPQQKMAELCQLTGVKLITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRI 220 (299)
Q Consensus 141 ~~~~~~~~~~~~~~~~gi~v~~~~pl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 220 (299)
+++. .+++++|+++||++++|+||++|+|++++.... .. .+.+. .+.+.++
T Consensus 204 ~~~~--~~l~~~c~~~gI~v~ayspL~~G~L~~~~~~~~---------~~----------------~~~~~--~~~l~~i 254 (334)
T 3krb_A 204 WHPN--DATVKFCLDNGIGVTAYSPMGGSYADPRDPSGT---------QK----------------NVILE--CKTLKAI 254 (334)
T ss_dssp TBCC--HHHHHHHHHTTCEEEEESTTCCSBC-------C---------CB----------------CGGGG--CHHHHHH
T ss_pred cccc--HHHHHHHHHcCCEEEEEecCCCCcccCCCCCCC---------cc----------------cchhc--cHHHHHH
Confidence 8765 579999999999999999999999988653320 00 00111 2789999
Q ss_pred HHHhCCCHHHHHH-----HHHHhCCCCceeeeccCCCCHHHHHHhHhhhcCCCCHHHHHHHHHHHhcC
Q 022300 221 ASKHGVSIPVVAV-----RYILDQPAVAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKKG 283 (299)
Q Consensus 221 a~~~~~s~aq~al-----~~~l~~~~v~~~i~g~~~~~~e~l~enl~a~~~~Lt~e~~~~i~~~~~~~ 283 (299)
|+++|+|++|+|| +|+++ + .++|+|++ +++||++|+++++++||+++++.|+++.+..
T Consensus 255 A~~~g~s~aqvaLaw~~~~w~l~-~--~~vI~gs~--~~~~l~en~~a~~~~Ls~ee~~~l~~l~~~~ 317 (334)
T 3krb_A 255 ADAKGTSPHCVALAWHVKKWNTS-M--YSVIPKSQ--TPARIEANFKCTEVQLSDDDMDAINNIHLNK 317 (334)
T ss_dssp HHHHTSCHHHHHHHHHHHHSCST-T--EEECCBCS--SHHHHHHHGGGGGCCCCHHHHHHHHHHHHHC
T ss_pred HHHhCcCHHHhHHhhHhhhhhcC-C--eEEeeCCC--CHHHHHHHHhhcCCCCCHHHHHHHHHhhcCC
Confidence 9999999999999 77777 3 67899999 9999999999999999999999999997665
No 37
>2bgs_A Aldose reductase; holoenzyme, aldo/keto reductase, oxidoreductase; HET: NDP; 1.64A {Hordeum vulgare} PDB: 2bgq_A* 2vdg_A*
Probab=100.00 E-value=2.1e-45 Score=336.87 Aligned_cols=220 Identities=16% Similarity=0.288 Sum_probs=192.7
Q ss_pred ee-eccccccCCCc--cHHHhhhc---------CCCcEEEEecccCCCCCCCHHHHHHHHHHHHhhcCCCcccEEEEecC
Q 022300 18 IT-MGLLKISMASS--SIEFVERG---------HQSSWISLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWW 85 (299)
Q Consensus 18 ~~-~g~~~~~~ag~--sE~~lg~~---------~R~~i~I~tK~~~~~~~~~~~~i~~~ve~SL~~Lg~d~iDl~~lH~p 85 (299)
+. .|++.||+|.. +|+.+|++ .|++++|+||+++ ...+++.+++++++||++||+||||+|+||||
T Consensus 70 l~~~Gi~~iDTA~~Yg~E~~vG~al~~~~~~g~~R~~v~I~TK~~~--~~~~~~~v~~ale~SL~rLg~dyIDl~llH~p 147 (344)
T 2bgs_A 70 ITEAGYRHVDTAAEYGVEKEVGKGLKAAMEAGIDRKDLFVTSKIWC--TNLAPERVRPALENTLKDLQLDYIDLYHIHWP 147 (344)
T ss_dssp HHTTCCCEEECCGGGTCHHHHHHHHHHHHHTTCCGGGCEEEEEECG--GGCSHHHHHHHHHHHHHHHTCSCEEEEEESSS
T ss_pred HHhcCCCEEECCCccCCHHHHHHHHHHhhhcCCCcccEEEEeccCC--CCCCHHHHHHHHHHHHHHhCCCcEEEEEEecC
Confidence 55 89999998753 79999976 4899999999976 35689999999999999999999999999999
Q ss_pred CCC--------------CCcHHHHHHHHHHHHHcCcccEEEecCCCHHHHHHHHHc-CCCeeEeeecccccccChhhHHH
Q 022300 86 DYS--------------NPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-GIPVVSNQVQHSVVDMRPQQKMA 150 (299)
Q Consensus 86 d~~--------------~~~~~~~~~~L~~l~~~Gkir~iGvs~~~~~~l~~~~~~-~~~~~~~q~~~n~~~~~~~~~~~ 150 (299)
+.. .....++|++|++|+++||||+||||||+.++++++++. +++|+++|++||++.+. .+++
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~e~~~aLe~l~~~GkIr~iGvSn~~~~~l~~~~~~~~i~p~v~Q~e~~~~~~~--~~ll 225 (344)
T 2bgs_A 148 FRLKDGAHMPPEAGEVLEFDMEGVWKEMENLVKDGLVKDIGVCNYTVTKLNRLLRSAKIPPAVCQMEMHPGWKN--DKIF 225 (344)
T ss_dssp CEECTTCCSSCCTTCEECCCHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHCSSCCSEEEEECBTTBCC--HHHH
T ss_pred CccccccccccccccccCCCHHHHHHHHHHHHHcCCccEEEEecCCHHHHHHHHHhcCCCceeeecccCcccCc--HHHH
Confidence 631 113789999999999999999999999999999999887 67899999999998764 5799
Q ss_pred HHHHHhCCeEEEcccccccccCCcccCCCCCCCCCCCCCCCchhHHHHhhhhhcCCchHHHHHHHHHHHHHHHhCCCHHH
Q 022300 151 ELCQLTGVKLITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASKHGVSIPV 230 (299)
Q Consensus 151 ~~~~~~gi~v~~~~pl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~la~~~~~s~aq 230 (299)
++|+++||++++|+||++|- ..... .+.+.++|+++|+|++|
T Consensus 226 ~~~~~~gI~v~a~spL~~G~--~~~~~------------------------------------~~~l~~iA~~~g~s~aq 267 (344)
T 2bgs_A 226 EACKKHGIHITAYSPLGSSE--KNLAH------------------------------------DPVVEKVANKLNKTPGQ 267 (344)
T ss_dssp HHHHHTTCEEEEESTTCTTT--TCCTT------------------------------------CHHHHHHHHHHTCCHHH
T ss_pred HHHHHCCCEEEEeCcccCCC--chhhc------------------------------------cHHHHHHHHHhCCCHHH
Confidence 99999999999999999881 00000 16789999999999999
Q ss_pred HHHHHHHhCCCCceeeeccCCCCHHHHHHhHhhhcCCCCHHHHHHHHHHHhcC
Q 022300 231 VAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKKG 283 (299)
Q Consensus 231 ~al~~~l~~~~v~~~i~g~~~~~~e~l~enl~a~~~~Lt~e~~~~i~~~~~~~ 283 (299)
+||+|+++++ .++|+|++ +++||++|+++++++||+++++.|+++.++.
T Consensus 268 vaL~w~l~~~--~~vI~gs~--~~~~l~eNl~a~~~~Ls~ee~~~l~~l~~~~ 316 (344)
T 2bgs_A 268 VLIKWALQRG--TSVIPKSS--KDERIKENIQVFGWEIPEEDFKVLCSIKDEK 316 (344)
T ss_dssp HHHHHHHHHT--CEECCBCS--SHHHHHHTTCCSSCCCCHHHHHHHHHSCTTC
T ss_pred HHHHHHHhCC--CeEEECCC--CHHHHHHHHHhcCCCCCHHHHHHHHHHhhcC
Confidence 9999999998 37899999 9999999999999999999999999986554
No 38
>4gac_A Alcohol dehydrogenase [NADP(+)]; TIM barrel, aldheyde reductase AKR1A4, SMAR1, oxidoreductase; HET: FLC; 1.64A {Mus musculus} PDB: 2alr_A 3h4g_A* 3cv7_A* 3fx4_A* 1ae4_A* 1cwn_A* 1hqt_A*
Probab=100.00 E-value=2.1e-45 Score=335.07 Aligned_cols=229 Identities=16% Similarity=0.256 Sum_probs=199.7
Q ss_pred ceeeccccccCCCc--cHHHhhhc-----------CCCcEEEEecccCCCCCCCHHHHHHHHHHHHhhcCCCcccEEEEe
Q 022300 17 PITMGLLKISMASS--SIEFVERG-----------HQSSWISLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFH 83 (299)
Q Consensus 17 ~~~~g~~~~~~ag~--sE~~lg~~-----------~R~~i~I~tK~~~~~~~~~~~~i~~~ve~SL~~Lg~d~iDl~~lH 83 (299)
.++.|++.||+|.. +|+++|++ .|+++++++|+++ .+.+++.+++++++||++||+||||||++|
T Consensus 35 Al~~Gin~~DTA~~YgsE~~vG~al~~~~~~~~~~~r~~~~~~~~~~~--~~~~~~~i~~~~~~SL~rL~~dyiDl~~lH 112 (324)
T 4gac_A 35 ALSAGYRHIDCASVYGNETEIGEALKESVGSGKAVPREELFVTSKLWN--TKHHPEDVEPALRKTLADLQLEYLDLYLMH 112 (324)
T ss_dssp HHHTTCCEEECCGGGSCHHHHHHHHHHHBSTTSSBCGGGCEEEEEECG--GGCSHHHHHHHHHHHHHHHTCSCBSEEEES
T ss_pred HHHcCCCEEECCcccCCHHHHHHHHHhhhcccceecccccccccccCC--CCCCHHHHHHHHHHHHHHhCCCccceeeec
Confidence 46789999999863 89999986 2789999999976 456899999999999999999999999999
Q ss_pred cCCC-------------------CCCcHHHHHHHHHHHHHcCcccEEEecCCCHHHHHHHHHc-CCCeeEeeeccccccc
Q 022300 84 WWDY-------------------SNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-GIPVVSNQVQHSVVDM 143 (299)
Q Consensus 84 ~pd~-------------------~~~~~~~~~~~L~~l~~~Gkir~iGvs~~~~~~l~~~~~~-~~~~~~~q~~~n~~~~ 143 (299)
||+. ..+ ++++|++|++|+++||||+||+|||+.++++++... .+.+.++|+.+|++..
T Consensus 113 ~p~~~~~~~~~~~~~~~~~~~~~~~~-~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~q~~~~~~~~ 191 (324)
T 4gac_A 113 WPYAFERGDNPFPKNADGTVRYDSTH-YKETWKALEVLVAKGLVKALGLSNFNSRQIDDVLSVASVRPAVLQVECHPYLA 191 (324)
T ss_dssp CSSEECSSSCSSCBCTTSCBCEECCC-HHHHHHHHHHHHHTTSBSCEEEESCCHHHHHHHHHHCSSCCCEEEEECBTTBC
T ss_pred cCcccccccccccccccCccccCCCC-HHHHHHHHHHHHHCCCeeEecCCCCCHHHHHHHHHhCCCCcceeeeccCchhh
Confidence 9863 233 789999999999999999999999999999999887 7889999999999655
Q ss_pred ChhhHHHHHHHHhCCeEEEcccccccccCCcccCCCCCCCCCCCCCCCchhHHHHhhhhhcCCchHHHHHHHHHHHHHHH
Q 022300 144 RPQQKMAELCQLTGVKLITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASK 223 (299)
Q Consensus 144 ~~~~~~~~~~~~~gi~v~~~~pl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~la~~ 223 (299)
+ .+++++|+++||++++|+||++|.+++++.... .... .+.+.++|++
T Consensus 192 ~--~~l~~~~~~~gi~~~a~spL~~g~~~~~~~~~~----------------------------~~~~--~~~l~~iA~~ 239 (324)
T 4gac_A 192 Q--NELIAHCHARGLEVTAYSPLGSSDRAWRHPDEP----------------------------VLLE--EPVVLALAEK 239 (324)
T ss_dssp C--HHHHHHHHHHTCEEEEESTTCCGGGGGGSTTSC----------------------------CGGG--CHHHHHHHHH
T ss_pred H--HHHHHHHHHhceeeeecCCcccCccccCCCCCc----------------------------chhh--HHHHHHHHHH
Confidence 4 579999999999999999999999987665430 0000 2678999999
Q ss_pred hCCCHHHHHHHHHHhCCCCceeeeccCCCCHHHHHHhHhhhcCCCCHHHHHHHHHHHhcCC
Q 022300 224 HGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKKGK 284 (299)
Q Consensus 224 ~~~s~aq~al~~~l~~~~v~~~i~g~~~~~~e~l~enl~a~~~~Lt~e~~~~i~~~~~~~~ 284 (299)
+|+|++|+||+|+++++.| +|+|++ +++||+||+++++++||+||+++|+++.+..+
T Consensus 240 ~g~t~aqvaL~w~l~~~~v--~I~G~~--~~~~l~eN~~a~~~~Ls~ee~~~id~l~~~~R 296 (324)
T 4gac_A 240 HGRSPAQILLRWQVQRKVI--CIPKSI--NPSRILQNIQVFDFTFSPEEMKQLDALNKNWR 296 (324)
T ss_dssp HTCCHHHHHHHHHHHTTCE--ECCBCC--CHHHHHHHTCCSSCCCCHHHHHHHHTTCCCCC
T ss_pred hCCCHHHHHHHHHHHCCCE--EEECCC--CHHHHHHHHhhCCCCCCHHHHHHHhccCcCCC
Confidence 9999999999999999855 799999 99999999999999999999999999855443
No 39
>3b3d_A YTBE protein, putative morphine dehydrogenase; aldo-keto reductase, oxidoreductase; 2.30A {Bacillus subtilis}
Probab=100.00 E-value=5.9e-45 Score=330.42 Aligned_cols=215 Identities=22% Similarity=0.356 Sum_probs=190.7
Q ss_pred ceeeccccccCCCc--cHHHhhhc----------CCCcEEEEecccCCCCCCCHHHHHHHHHHHHhhcCCCcccEEEEec
Q 022300 17 PITMGLLKISMASS--SIEFVERG----------HQSSWISLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHW 84 (299)
Q Consensus 17 ~~~~g~~~~~~ag~--sE~~lg~~----------~R~~i~I~tK~~~~~~~~~~~~i~~~ve~SL~~Lg~d~iDl~~lH~ 84 (299)
.++.|++.||+|.. +|+.+|++ .|++++++||++. .+.+++.+++++++||++||+||||||++|+
T Consensus 74 Al~~Gi~~~DTA~~YgnE~~vG~~l~~~~~~~~i~r~~~~i~~k~~~--~~~~~~~~~~~~e~SL~rL~~dyiDL~~~H~ 151 (314)
T 3b3d_A 74 AIVHGYRSIDTAAIYGNEAGVGEGIREGIEEAGISREDLFITSKVWN--ADLGYEETLAAFETSLSKLGLDYLDLYLIHW 151 (314)
T ss_dssp HHHHTCCEEECCGGGTCHHHHHHHHHHHHHHHTCCGGGCEEEEEECG--GGCSHHHHHHHHHHHHHHHTCSCEEEEEESS
T ss_pred HHHcCCCEEECccccCChHHHHHHHHHHHHHhCCCcccccccccCcC--CCCCHHHHHHHHHHHHHHhCCCccccccccc
Confidence 47789999999753 78899874 3899999999976 4678999999999999999999999999999
Q ss_pred CCCCCCcHHHHHHHHHHHHHcCcccEEEecCCCHHHHHHHHHc-CCCeeEeeecccccccChhhHHHHHHHHhCCeEEEc
Q 022300 85 WDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-GIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITY 163 (299)
Q Consensus 85 pd~~~~~~~~~~~~L~~l~~~Gkir~iGvs~~~~~~l~~~~~~-~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~~~ 163 (299)
|+.. . ..++|++|++|+++||||+||||||+.+++.++... .+.+.++|++++. +..+.+++++|+++||++++|
T Consensus 152 ~~~~-~-~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~i~~~~nq~~~~~--~~~~~~ll~~c~~~gI~v~a~ 227 (314)
T 3b3d_A 152 PVEG-K-YKEAWRALETLYKEGRIKAIGVSNFQIHHLEDLMTAAEIKPMINQVEFHP--RLTQKELIRYCQNQGIQMEAW 227 (314)
T ss_dssp CCTT-T-HHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHTTTCSSCCSEEEEECBT--TBCCHHHHHHHHHHTCEEEEE
T ss_pred cccc-c-hhHHHHHHHHHHHCCCEeEEEecCCchHHHHHHHHhcCCCeEEEEecccc--ccchHHHHHHHHHcCCEEEEe
Confidence 8754 3 679999999999999999999999999999999887 6777778877765 555668999999999999999
Q ss_pred ccccccccCCcccCCCCCCCCCCCCCCCchhHHHHhhhhhcCCchHHHHHHHHHHHHHHHhCCCHHHHHHHHHHhCCCCc
Q 022300 164 GTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASKHGVSIPVVAVRYILDQPAVA 243 (299)
Q Consensus 164 ~pl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~la~~~~~s~aq~al~~~l~~~~v~ 243 (299)
+||++|.|++ ...+.++|+++|+|++|+||+|+++++.|
T Consensus 228 sPL~~G~L~~----------------------------------------~~~~~~ia~~~g~t~aqvaL~w~l~~~~v- 266 (314)
T 3b3d_A 228 SPLMQGQLLD----------------------------------------HPVLADIAQTYNKSVAQIILRWDLQHGII- 266 (314)
T ss_dssp STTGGGTTTT----------------------------------------CHHHHHHHHHTTCCHHHHHHHHHHHTTCE-
T ss_pred ccccCCcccC----------------------------------------chhhHHHHHHcCCCHHHHHHHHHHhCCCE-
Confidence 9999998864 14567899999999999999999999965
Q ss_pred eeeeccCCCCHHHHHHhHhhhcCCCCHHHHHHHHHHHh
Q 022300 244 GSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTK 281 (299)
Q Consensus 244 ~~i~g~~~~~~e~l~enl~a~~~~Lt~e~~~~i~~~~~ 281 (299)
+|+|++ +++||+||+++++++||+||+++|+++.+
T Consensus 267 -~I~G~~--~~~~l~eNl~a~~~~Ls~ee~~~ld~l~~ 301 (314)
T 3b3d_A 267 -TIPKST--KEHRIKENASVFDFELTQDDMNRIDALNE 301 (314)
T ss_dssp -ECCBCC--CHHHHHHHHCCSSCCCCHHHHHHHHTTCC
T ss_pred -EEECCC--CHHHHHHHHHhcCCCCCHHHHHHHhccCC
Confidence 799999 99999999999999999999999998743
No 40
>4exb_A Putative uncharacterized protein; aldo-keto reductase, NADP+ binding, oxidoreducta; 2.75A {Pseudomonas aeruginosa} PDB: 4exa_A
Probab=100.00 E-value=7.7e-45 Score=326.38 Aligned_cols=199 Identities=18% Similarity=0.203 Sum_probs=171.3
Q ss_pred ceeeccccccCCC---ccHHHhhhc---CCCcEEEEecccCC------CCCCCHHHHHHHHHHHHhhcCCCcccEEEEec
Q 022300 17 PITMGLLKISMAS---SSIEFVERG---HQSSWISLTKWVPP------PVKMTSSIVRESIDVSRRRMDVPCLDMLQFHW 84 (299)
Q Consensus 17 ~~~~g~~~~~~ag---~sE~~lg~~---~R~~i~I~tK~~~~------~~~~~~~~i~~~ve~SL~~Lg~d~iDl~~lH~ 84 (299)
.++.|++.||+|. .||+++|++ .|+++||+||++.. ..+.+++.+++++++||++||+||||+|++|+
T Consensus 79 Al~~Gi~~~DTA~~Yg~sE~~lG~al~~~R~~v~I~TK~~~~~~~~~~~~~~~~~~i~~~~e~SL~rLg~dyiDl~llH~ 158 (292)
T 4exb_A 79 ARDLGINLIDTAPAYGRSEERLGPLLRGQREHWVIVSKVGEEFVDGQSVFDFSAAHTRRSVERSLKRLETDRIELVLVHS 158 (292)
T ss_dssp HHHTTCCEEECCTTSTTHHHHHHHHHTTTGGGCEEEEEESBC--CCSCCBCCCHHHHHHHHHHHHHHTTSSCEEEEEEEC
T ss_pred HHHcCCCEEEcCCccchHHHHHHHHhccCCCcEEEEEeeccccCCCCccCCCCHHHHHHHHHHHHHHhCCCceeEEEEec
Confidence 3567777777654 699999997 48999999999842 23578999999999999999999999999999
Q ss_pred C--CCCCCcHH-HHHHHHHHHHHcCcccEEEecCCCHHHHHHHHHcCCCeeEeeecccccccChhhHHHHHHHHhCCeEE
Q 022300 85 W--DYSNPGYL-DALNHLTDLKEEGKIKTVALTNFDTERLRIILENGIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLI 161 (299)
Q Consensus 85 p--d~~~~~~~-~~~~~L~~l~~~Gkir~iGvs~~~~~~l~~~~~~~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~ 161 (299)
| +...+ .+ ++|++|++|+++||||+||||||+.++++++++. |+++|++||++++.. .+++++|+++||+++
T Consensus 159 p~~d~~~~-~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~---~~~~Q~~~~~~~~~~-~~l~~~~~~~gi~v~ 233 (292)
T 4exb_A 159 DGNDLDIL-ENSEVYPTLAALKREGLIGAYGLSGKTVEGGLRALRE---GDCAMVTYNLNERAE-RPVIEYAAAHAKGIL 233 (292)
T ss_dssp CSCHHHHH-HHSSHHHHHHHHHHTTSEEEEEEECSSHHHHHHHHHH---SSEEEEECSSSCCTT-HHHHHHHHHTTCEEE
T ss_pred CCCCcccc-chHHHHHHHHHHHHCCCceEEEeCCCCHHHHHHHHHh---hcEEeeccccccCCH-HHHHHHHHHCCcEEE
Confidence 9 44333 44 8999999999999999999999999999999886 899999999999887 689999999999999
Q ss_pred EcccccccccCCcccCCCCCCCCCCCCCCCchhHHHHhhhhhcCCchHHHHHHHHHHHHHHHhCCCHHHHHHHHHHhCCC
Q 022300 162 TYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASKHGVSIPVVAVRYILDQPA 241 (299)
Q Consensus 162 ~~~pl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~la~~~~~s~aq~al~~~l~~~~ 241 (299)
+|+||++|+|++ ++|+|++|+||+|+++++.
T Consensus 234 a~spL~~G~L~~-------------------------------------------------~~g~t~aqvaL~w~l~~~~ 264 (292)
T 4exb_A 234 VKKALASGHACL-------------------------------------------------GAGQDPVRASFELVFDQPG 264 (292)
T ss_dssp EECCSCC---------------------------------------------------------CCHHHHHHHHHHHSTT
T ss_pred EeccccCCccCC-------------------------------------------------CCCCCHHHHHHHHHHhCCC
Confidence 999999997632 2789999999999999999
Q ss_pred CceeeeccCCCCHHHHHHhHhhhcCCCCHH
Q 022300 242 VAGSMIGVRLGLAEHIQDTNAIFMLSLDED 271 (299)
Q Consensus 242 v~~~i~g~~~~~~e~l~enl~a~~~~Lt~e 271 (299)
|.++|+|++ +++||+||++++++.||+|
T Consensus 265 v~~vI~g~~--~~~~l~en~~a~~~~Ls~~ 292 (292)
T 4exb_A 265 VAAAIVGTI--NPLHLAHNVAMAAQALKKA 292 (292)
T ss_dssp CCEEEECCC--CHHHHHHHHHHHHHHHC--
T ss_pred CeEEEeCCC--CHHHHHHHHHHhhccCCCC
Confidence 999999999 9999999999999988875
No 41
>3cf4_A Acetyl-COA decarboxylase/synthase alpha subunit; methanomicrobia, iron-nikel-sulfur, 4Fe-NI-4S, oxidoreductas; 2.00A {Methanosarcina barkeri}
Probab=98.25 E-value=4e-07 Score=91.19 Aligned_cols=132 Identities=10% Similarity=0.027 Sum_probs=95.2
Q ss_pred HHHHHhhcCCCcccEEEEecCCCCCCcHHHHHHHHHHHHHcCcccEE--EecCCCH---H----------------HHHH
Q 022300 65 IDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTV--ALTNFDT---E----------------RLRI 123 (299)
Q Consensus 65 ve~SL~~Lg~d~iDl~~lH~pd~~~~~~~~~~~~L~~l~~~Gkir~i--Gvs~~~~---~----------------~l~~ 123 (299)
++.||..|++||+|| ++|.-+. ...++++++++++..+|+|+++ |+++|.. + ...+
T Consensus 231 ~e~sL~~L~~d~vdI-~I~Ghn~--~~~~~iLeaa~~a~~~g~I~~iG~c~T~he~lr~~~~~~~~~~~pv~G~~~~~~~ 307 (807)
T 3cf4_A 231 VEIGMGTIDKSKPFL-CVIGHNV--AGVTYMMDYMEDNNLTDKMEIAGLCCTAIDLTRYKEADRRPPYAKVIGSMSKELK 307 (807)
T ss_dssp EEESGGGSCTTSCEE-EEESSCC--HHHHHHHHHHHHTTCTTTSEEEEESHHHHHHTTTTCTTCCCCCSEEEESGGGHHH
T ss_pred eeccccccCCCCceE-EEECCcC--ccHHHHHHHHHHCCCCCCCcEEeeccCCCchhhccccccccccccccccHHHHHH
Confidence 567889999999999 4774322 2246889999999999999999 5554444 1 2233
Q ss_pred HHHcCCCeeEeeecccccccChhhHHHHHHHHhCCeEEEcccccc-cccCCcccCCCCCCCCCCCCCCCchhHHHHhhhh
Q 022300 124 ILENGIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYGTVMG-GLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVD 202 (299)
Q Consensus 124 ~~~~~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~~~~pl~~-G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (299)
++.. ..++++++.||.... .+++.|.++|++|++++|..+ |.+..
T Consensus 308 ~i~t-Ga~dv~vV~~n~i~~----~ll~~a~~~Gm~Vit~sp~~~~Grpd~----------------------------- 353 (807)
T 3cf4_A 308 VIRS-GMPDVIVVDEQCVRG----DIVPEAQKLKIPVIASNPKIMYGLPNR----------------------------- 353 (807)
T ss_dssp HHHH-TCCSEEEECSSSCCT----THHHHHHHTTCCEEECSTTCCTTCCBC-----------------------------
T ss_pred Hhhc-CCCeEEEEEecCCCh----HHHHHHHHCCCEEEEechhhhcCCCcc-----------------------------
Confidence 3443 469999999997542 578999999999999999876 54321
Q ss_pred hcCCchHHHHHHHHHHHHHHHhCCCHHHHHHHHHHhCCCCceeeeccCCCCHHHH
Q 022300 203 AWGGWSQFQVLLQTLKRIASKHGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHI 257 (299)
Q Consensus 203 ~~~~~~~~~~~~~~l~~la~~~~~s~aq~al~~~l~~~~v~~~i~g~~~~~~e~l 257 (299)
.+ .+++.+++|+++++...++.+|.. ++.++
T Consensus 354 ---------------------~d-~~~~~~le~LLs~~~~~~l~~g~~--~~~el 384 (807)
T 3cf4_A 354 ---------------------TD-ADVDETMEELKSGKIPGCVMLDYD--KLGEL 384 (807)
T ss_dssp ---------------------TT-SCHHHHHHHHHTTSSSEEECCCHH--HHHHH
T ss_pred ---------------------cc-chHHHHHHHHHhCCCCCceeeCCc--cHHHH
Confidence 01 227789999999885444567777 77665
No 42
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=77.68 E-value=8.6 Score=33.25 Aligned_cols=108 Identities=6% Similarity=0.020 Sum_probs=64.7
Q ss_pred CCCHHHHHHHHHHHHhhcCCCcccEEEEecCCCCCCcHHHHHHHHHHHHHcCcccEEEecCCCHHHHHHHHHcCCCeeEe
Q 022300 55 KMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILENGIPVVSN 134 (299)
Q Consensus 55 ~~~~~~i~~~ve~SL~~Lg~d~iDl~~lH~pd~~~~~~~~~~~~L~~l~~~Gkir~iGvs~~~~~~l~~~~~~~~~~~~~ 134 (299)
.++.+...+- -+.|.++|+++|.+-....+... +.+.+.++.+..+.+...++...+. -+.+.++.+.+.+.+...+
T Consensus 22 ~~~~e~k~~i-~~~L~~~Gv~~IE~g~~~~~~~~-p~~~~~~e~~~~i~~~~~~~v~~l~-~n~~~i~~a~~~G~~~V~i 98 (295)
T 1ydn_A 22 FVPTADKIAL-INRLSDCGYARIEATSFVSPKWV-PQLADSREVMAGIRRADGVRYSVLV-PNMKGYEAAAAAHADEIAV 98 (295)
T ss_dssp CCCHHHHHHH-HHHHTTTTCSEEEEEECSCTTTC-GGGTTHHHHHHHSCCCSSSEEEEEC-SSHHHHHHHHHTTCSEEEE
T ss_pred CcCHHHHHHH-HHHHHHcCcCEEEEccCcCcccc-ccccCHHHHHHHHHhCCCCEEEEEe-CCHHHHHHHHHCCCCEEEE
Confidence 3566665554 45578899999998765443311 2123556677777666566665655 5678888888876543322
Q ss_pred eecccc------cccCh------hhHHHHHHHHhCCeEEEccc
Q 022300 135 QVQHSV------VDMRP------QQKMAELCQLTGVKLITYGT 165 (299)
Q Consensus 135 q~~~n~------~~~~~------~~~~~~~~~~~gi~v~~~~p 165 (299)
-..-|- +.+.. -.+.+++|++.|+.|.++-.
T Consensus 99 ~~~~S~~h~~~~~~~~~~e~~~~~~~~v~~a~~~G~~V~~~l~ 141 (295)
T 1ydn_A 99 FISASEGFSKANINCTIAESIERLSPVIGAAINDGLAIRGYVS 141 (295)
T ss_dssp EEESCHHHHHHHTSSCHHHHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred EEecCHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCeEEEEEE
Confidence 221220 01121 13568999999999875433
No 43
>4djd_D C/Fe-SP, corrinoid/iron-sulfur protein small subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_D* 4djf_D*
Probab=72.59 E-value=15 Score=32.46 Aligned_cols=99 Identities=7% Similarity=0.050 Sum_probs=63.9
Q ss_pred HHHHHHHHHhhcCCCcccEEEE-ecCCCCCCcHHHHHHHHHHHHHcCcccEEEec-----CCCHHHHHHHHHcC--CCee
Q 022300 61 VRESIDVSRRRMDVPCLDMLQF-HWWDYSNPGYLDALNHLTDLKEEGKIKTVALT-----NFDTERLRIILENG--IPVV 132 (299)
Q Consensus 61 i~~~ve~SL~~Lg~d~iDl~~l-H~pd~~~~~~~~~~~~L~~l~~~Gkir~iGvs-----~~~~~~l~~~~~~~--~~~~ 132 (299)
+.+-.++..+..|.|.||+-.- -+|+...-..++..+.++.+++.-.+ -|-+. ++.++.++++++.+ ..+.
T Consensus 82 ~~~~A~~~v~~~GAdiIDIg~eStrP~~~~vs~ee~~~~V~~v~~~~~v-PlsIDg~~~~T~~~eV~eaAleagag~~~l 160 (323)
T 4djd_D 82 PGRWAQKCVAEYGADLIYLKLDGADPEGANHSVDQCVATVKEVLQAVGV-PLVVVGCGDVEKDHEVLEAVAEAAAGENLL 160 (323)
T ss_dssp HHHHHHHHHHTTCCSEEEEECGGGCTTTTCCCHHHHHHHHHHHHHHCCS-CEEEECCSCHHHHHHHHHHHHHHTTTSCCE
T ss_pred HHHHHHHHHHHcCCCEEEEcCccCCCCCCCCCHHHHHHHHHHHHhhCCc-eEEEECCCCCCCCHHHHHHHHHhcCCCCCe
Confidence 4343444346789999998644 35543333356667777777765222 35566 66788899998874 3455
Q ss_pred EeeecccccccChhhHHHHHHHHhCCeEEEccc
Q 022300 133 SNQVQHSVVDMRPQQKMAELCQLTGVKLITYGT 165 (299)
Q Consensus 133 ~~q~~~n~~~~~~~~~~~~~~~~~gi~v~~~~p 165 (299)
++-+... . ..++++.+.++|..|+.+.|
T Consensus 161 INsv~~~----~-~~~m~~laa~~g~~vVlmh~ 188 (323)
T 4djd_D 161 LGNAEQE----N-YKSLTAACMVHKHNIIARSP 188 (323)
T ss_dssp EEEEBTT----B-CHHHHHHHHHHTCEEEEECS
T ss_pred EEECCcc----c-HHHHHHHHHHhCCeEEEEcc
Confidence 5544332 1 24689999999999999875
No 44
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=71.91 E-value=46 Score=28.35 Aligned_cols=75 Identities=13% Similarity=0.022 Sum_probs=60.6
Q ss_pred CCCCCHHHHHHHHHHHHh-hcCCCcccEEEEecCCCCCCcHHHHHHHHHHHHHcCcccEEEecCCCHHHHHHHHHcC
Q 022300 53 PVKMTSSIVRESIDVSRR-RMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILENG 128 (299)
Q Consensus 53 ~~~~~~~~i~~~ve~SL~-~Lg~d~iDl~~lH~pd~~~~~~~~~~~~L~~l~~~Gkir~iGvs~~~~~~l~~~~~~~ 128 (299)
..+.+.+...+..+-..+ -++++.|-|..+..+....++..+++++.+.|+++|-.-. =+++-++...+.+.+.+
T Consensus 81 ag~~ta~eAv~~a~lare~~~~~~~iKlEv~~d~~~llpD~~~tv~aa~~L~~~Gf~Vl-py~~dd~~~akrl~~~G 156 (265)
T 1wv2_A 81 AGCYDAVEAVRTCRLARELLDGHNLVKLEVLADQKTLFPNVVETLKAAEQLVKDGFDVM-VYTSDDPIIARQLAEIG 156 (265)
T ss_dssp TTCCSHHHHHHHHHHHHTTTTSCCEEEECCBSCTTTCCBCHHHHHHHHHHHHTTTCEEE-EEECSCHHHHHHHHHSC
T ss_pred CCCCCHHHHHHHHHHHHHHcCCCCeEEEEeecCccccCcCHHHHHHHHHHHHHCCCEEE-EEeCCCHHHHHHHHHhC
Confidence 346789999999999999 8999999999888877777779999999999999997543 33555677777777654
No 45
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=68.01 E-value=59 Score=28.02 Aligned_cols=106 Identities=11% Similarity=0.102 Sum_probs=62.1
Q ss_pred CCCHHHHHHHHHHHHhhcCCCcccEEEEecCCCCCCcHHHHHHHHHHHHHcCcccEEEecCCCHHHHHHHHHcCCCeeEe
Q 022300 55 KMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILENGIPVVSN 134 (299)
Q Consensus 55 ~~~~~~i~~~ve~SL~~Lg~d~iDl~~lH~pd~~~~~~~~~~~~L~~l~~~Gkir~iGvs~~~~~~l~~~~~~~~~~~~~ 134 (299)
.++.+...+ +=+.|.++|+++|.......|.. .+.+.+.++.+..+.+...++..++. -+.+.++.+++.+++...+
T Consensus 26 ~~~~e~k~~-i~~~L~~~Gv~~IE~g~~~~~~~-~~~~~d~~~~~~~~~~~~~~~~~~l~-~~~~~i~~a~~aG~~~v~i 102 (302)
T 2ftp_A 26 PIEVADKIR-LVDDLSAAGLDYIEVGSFVSPKW-VPQMAGSAEVFAGIRQRPGVTYAALA-PNLKGFEAALESGVKEVAV 102 (302)
T ss_dssp CCCHHHHHH-HHHHHHHTTCSEEEEEECSCTTT-CGGGTTHHHHHHHSCCCTTSEEEEEC-CSHHHHHHHHHTTCCEEEE
T ss_pred CCCHHHHHH-HHHHHHHcCcCEEEECCCcCccc-cccccCHHHHHHHhhhcCCCEEEEEe-CCHHHHHHHHhCCcCEEEE
Confidence 456666554 44567999999999987554421 12122333444455545566665655 4788888888876543222
Q ss_pred eeccccc------ccCh------hhHHHHHHHHhCCeEEEc
Q 022300 135 QVQHSVV------DMRP------QQKMAELCQLTGVKLITY 163 (299)
Q Consensus 135 q~~~n~~------~~~~------~~~~~~~~~~~gi~v~~~ 163 (299)
-..-|-. .... -.+++++|+++|+.|.++
T Consensus 103 ~~~~s~~~~~~~~~~s~ee~l~~~~~~v~~a~~~G~~V~~~ 143 (302)
T 2ftp_A 103 FAAASEAFSQRNINCSIKDSLERFVPVLEAARQHQVRVRGY 143 (302)
T ss_dssp EEESCHHHHHHHHSSCHHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred EEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEE
Confidence 2222211 1111 246899999999988653
No 46
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A*
Probab=60.20 E-value=78 Score=26.75 Aligned_cols=100 Identities=16% Similarity=0.109 Sum_probs=59.4
Q ss_pred CHHHHHHHHHHHHhhcCCCcccEEEEecCCCCCCcHHHHHHHHHHHHHcCcccEEEecCCCHHHHHHHHHc--CCCeeEe
Q 022300 57 TSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN--GIPVVSN 134 (299)
Q Consensus 57 ~~~~i~~~ve~SL~~Lg~d~iDl~~lH~pd~~~~~~~~~~~~L~~l~~~Gkir~iGvs~~~~~~l~~~~~~--~~~~~~~ 134 (299)
+.+.+.+..++.. .-|.|.||+-. .. ...+ .++-++.+...+++--=--|.+-++.++.++++++. |. .-+|
T Consensus 23 ~~~~a~~~a~~~v-~~GAdiIDIg~--g~-~~v~-~~ee~~rvv~~i~~~~~~pisIDT~~~~v~~aAl~a~~Ga-~iIN 96 (262)
T 1f6y_A 23 DPAPVQEWARRQE-EGGARALDLNV--GP-AVQD-KVSAMEWLVEVTQEVSNLTLCLDSTNIKAIEAGLKKCKNR-AMIN 96 (262)
T ss_dssp CHHHHHHHHHHHH-HHTCSEEEEBC--C-----C-HHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHCSSC-EEEE
T ss_pred CHHHHHHHHHHHH-HCCCcEEEECC--CC-CCCC-hHHHHHHHHHHHHHhCCCeEEEeCCCHHHHHHHHhhCCCC-CEEE
Confidence 4566666665544 57999999986 11 1122 333344444444431112477889999999999987 53 2222
Q ss_pred eecccccccChhhHHHHHHHHhCCeEEEccc
Q 022300 135 QVQHSVVDMRPQQKMAELCQLTGVKLITYGT 165 (299)
Q Consensus 135 q~~~n~~~~~~~~~~~~~~~~~gi~v~~~~p 165 (299)
-+ |.. ..+..++++.+++.|+.++.+..
T Consensus 97 dv--s~~-~d~~~~~~~~~a~~~~~vvlmh~ 124 (262)
T 1f6y_A 97 ST--NAE-REKVEKLFPLAVEHGAALIGLTM 124 (262)
T ss_dssp EE--CSC-HHHHHHHHHHHHHTTCEEEEESC
T ss_pred EC--CCC-cccHHHHHHHHHHhCCcEEEEcC
Confidence 22 222 12223789999999999999743
No 47
>3k13_A 5-methyltetrahydrofolate-homocysteine methyltrans; 5-methyltetrahydrofolate,methyltransferase, TIM barrel, STRU genomics, PSI-2; HET: MSE THH GOL; 2.00A {Bacteroides thetaiotaomicron}
Probab=59.42 E-value=56 Score=28.38 Aligned_cols=105 Identities=10% Similarity=-0.014 Sum_probs=62.2
Q ss_pred CHHHHHHHHHHHHhhcCCCcccEEEEecCCCCCCcHHHHHHHHHHHHHc--Ccc-cEEEecCCCHHHHHHHHHc--CCCe
Q 022300 57 TSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEE--GKI-KTVALTNFDTERLRIILEN--GIPV 131 (299)
Q Consensus 57 ~~~~i~~~ve~SL~~Lg~d~iDl~~lH~pd~~~~~~~~~~~~L~~l~~~--Gki-r~iGvs~~~~~~l~~~~~~--~~~~ 131 (299)
+++.+.+..++.. .-|.|.||+-. . ....+ .++.++.+..+++. ... --|.+-++.++.++++++. |. .
T Consensus 35 ~~~~a~~~A~~~v-~~GAdiIDIg~--g-~~~v~-~~eem~rvv~~i~~~~~~~~vpisIDT~~~~V~eaaL~~~~Ga-~ 108 (300)
T 3k13_A 35 KYDEALSIARQQV-EDGALVIDVNM--D-DGLLD-ARTEMTTFLNLIMSEPEIARVPVMIDSSKWEVIEAGLKCLQGK-S 108 (300)
T ss_dssp CHHHHHHHHHHHH-HTTCSEEEEEC--C-CTTSC-HHHHHHHHHHHHHTCHHHHTSCEEEECSCHHHHHHHHHHCSSC-C
T ss_pred CHHHHHHHHHHHH-HCCCCEEEECC--C-CCCCC-HHHHHHHHHHHHHHhhhcCCCeEEEeCCCHHHHHHHHHhcCCC-C
Confidence 5666666666544 57999999987 1 11222 33333333343332 011 2478889999999999984 43 3
Q ss_pred eEeeecccccccCh-hhHHHHHHHHhCCeEEEccccccc
Q 022300 132 VSNQVQHSVVDMRP-QQKMAELCQLTGVKLITYGTVMGG 169 (299)
Q Consensus 132 ~~~q~~~n~~~~~~-~~~~~~~~~~~gi~v~~~~pl~~G 169 (299)
.+|-+. .....+ -.++++.++++|..++.+.--..|
T Consensus 109 iINdIs--~~~~d~~~~~~~~l~a~~ga~vV~mh~d~~G 145 (300)
T 3k13_A 109 IVNSIS--LKEGEEVFLEHARIIKQYGAATVVMAFDEKG 145 (300)
T ss_dssp EEEEEC--STTCHHHHHHHHHHHHHHTCEEEEESEETTE
T ss_pred EEEeCC--cccCChhHHHHHHHHHHhCCeEEEEeeCCCC
Confidence 344333 221111 126899999999999997443344
No 48
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=57.58 E-value=89 Score=26.58 Aligned_cols=102 Identities=10% Similarity=0.009 Sum_probs=67.2
Q ss_pred CHHHHHHHHHHHHhhcCCCcccEEEEecCCCCCCcHHHHHHHHHHHHHcCcccEEEecCCCHHHHHHHHHc--CCCeeEe
Q 022300 57 TSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN--GIPVVSN 134 (299)
Q Consensus 57 ~~~~i~~~ve~SL~~Lg~d~iDl~~lH~pd~~~~~~~~~~~~L~~l~~~Gkir~iGvs~~~~~~l~~~~~~--~~~~~~~ 134 (299)
+.+.+.+..++.. .-|.|.||+-.--. .....+.+...++.+++.-.+ -|.+-++.++.++++++. |.++ +|
T Consensus 32 ~~~~a~~~a~~~v-~~GAdiIDIg~~s~---~~eE~~rv~~vi~~l~~~~~~-pisIDT~~~~v~~aal~a~~Ga~i-IN 105 (271)
T 2yci_X 32 DPRPIQEWARRQA-EKGAHYLDVNTGPT---ADDPVRVMEWLVKTIQEVVDL-PCCLDSTNPDAIEAGLKVHRGHAM-IN 105 (271)
T ss_dssp CCHHHHHHHHHHH-HTTCSEEEEECCSC---SSCHHHHHHHHHHHHHHHCCC-CEEEECSCHHHHHHHHHHCCSCCE-EE
T ss_pred CHHHHHHHHHHHH-HCCCCEEEEcCCcC---chhHHHHHHHHHHHHHHhCCC-eEEEeCCCHHHHHHHHHhCCCCCE-EE
Confidence 4566666665554 68999999876552 222266777777777765222 377789999999999987 5332 22
Q ss_pred eecccccccChh--hHHHHHHHHhCCeEEEccccccc
Q 022300 135 QVQHSVVDMRPQ--QKMAELCQLTGVKLITYGTVMGG 169 (299)
Q Consensus 135 q~~~n~~~~~~~--~~~~~~~~~~gi~v~~~~pl~~G 169 (299)
-+. .. .+ .++++.+++.|..++.+..-..|
T Consensus 106 dvs--~~---~d~~~~~~~~~a~~~~~vv~m~~d~~G 137 (271)
T 2yci_X 106 STS--AD---QWKMDIFFPMAKKYEAAIIGLTMNEKG 137 (271)
T ss_dssp EEC--SC---HHHHHHHHHHHHHHTCEEEEESCBTTB
T ss_pred ECC--CC---ccccHHHHHHHHHcCCCEEEEecCCCC
Confidence 222 21 12 46899999999999997543244
No 49
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=57.52 E-value=91 Score=26.69 Aligned_cols=100 Identities=16% Similarity=0.083 Sum_probs=65.9
Q ss_pred CCHHHHHHHHHHHHhhcCCCcccEEEEe-cCC-----CCCCcHHHHHHHHHHHHHcCcccEEEecCCCHHHHHHHHHcCC
Q 022300 56 MTSSIVRESIDVSRRRMDVPCLDMLQFH-WWD-----YSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILENGI 129 (299)
Q Consensus 56 ~~~~~i~~~ve~SL~~Lg~d~iDl~~lH-~pd-----~~~~~~~~~~~~L~~l~~~Gkir~iGvs~~~~~~l~~~~~~~~ 129 (299)
.+.+.+.+..++ +-.-|.|.||+---- +|. .... +..+...++.+++.+. -|.+-++.++.++++++.|.
T Consensus 26 ~~~~~a~~~a~~-~v~~GAdiIDIGgestrpga~~v~~~eE-~~Rv~pvi~~l~~~~~--piSIDT~~~~va~aAl~aGa 101 (280)
T 1eye_A 26 LDLDDAVKHGLA-MAAAGAGIVDVGGESSRPGATRVDPAVE-TSRVIPVVKELAAQGI--TVSIDTMRADVARAALQNGA 101 (280)
T ss_dssp CSHHHHHHHHHH-HHHTTCSEEEEECC---------------HHHHHHHHHHHHHTTC--CEEEECSCHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHH-HHHCCCCEEEECCccCCCCCCCCCHHHH-HHHHHHHHHHhhcCCC--EEEEeCCCHHHHHHHHHcCC
Confidence 356777666644 445699999998532 232 1222 6678888888887743 47888999999999999864
Q ss_pred CeeEeeecccccccChhhHHHHHHHHhCCeEEEcc
Q 022300 130 PVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYG 164 (299)
Q Consensus 130 ~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~~~~ 164 (299)
++. |-+ |.... ..++++.+++.|+.++.+.
T Consensus 102 ~iI-Ndv--sg~~~--d~~m~~~~a~~~~~vVlmh 131 (280)
T 1eye_A 102 QMV-NDV--SGGRA--DPAMGPLLAEADVPWVLMH 131 (280)
T ss_dssp CEE-EET--TTTSS--CTTHHHHHHHHTCCEEEEC
T ss_pred CEE-EEC--CCCCC--CHHHHHHHHHhCCeEEEEc
Confidence 332 222 22211 3468999999999999974
No 50
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=52.69 E-value=40 Score=26.88 Aligned_cols=88 Identities=14% Similarity=0.197 Sum_probs=52.3
Q ss_pred CHHHHHHHHHHHHhhcCCCcccEEEEecCCCCCCcHHHHHHHHHHHHHc-CcccEEEecC-CCHHHHHHHHHcCCCeeEe
Q 022300 57 TSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEE-GKIKTVALTN-FDTERLRIILENGIPVVSN 134 (299)
Q Consensus 57 ~~~~i~~~ve~SL~~Lg~d~iDl~~lH~pd~~~~~~~~~~~~L~~l~~~-Gkir~iGvs~-~~~~~l~~~~~~~~~~~~~ 134 (299)
+.+.+.+.++. +..-| +|++-+|.-. +...+. +..+++. ++=..||+++ ++.+++..+.+.|.++.
T Consensus 20 ~~~~~~~~~~~-~~~~G---~~~iev~~~~---~~~~~~---i~~ir~~~~~~~~ig~~~v~~~~~~~~a~~~Gad~i-- 87 (205)
T 1wa3_A 20 SVEEAKEKALA-VFEGG---VHLIEITFTV---PDADTV---IKELSFLKEKGAIIGAGTVTSVEQCRKAVESGAEFI-- 87 (205)
T ss_dssp SHHHHHHHHHH-HHHTT---CCEEEEETTS---TTHHHH---HHHTHHHHHTTCEEEEESCCSHHHHHHHHHHTCSEE--
T ss_pred CHHHHHHHHHH-HHHCC---CCEEEEeCCC---hhHHHH---HHHHHHHCCCCcEEEecccCCHHHHHHHHHcCCCEE--
Confidence 45665555443 44555 4555677532 223333 4444443 3224588844 78999888888765554
Q ss_pred eecccccccChhhHHHHHHHHhCCeEEE
Q 022300 135 QVQHSVVDMRPQQKMAELCQLTGVKLIT 162 (299)
Q Consensus 135 q~~~n~~~~~~~~~~~~~~~~~gi~v~~ 162 (299)
+.-+ ...++++.|++.|+.+++
T Consensus 88 -v~~~-----~~~~~~~~~~~~g~~vi~ 109 (205)
T 1wa3_A 88 -VSPH-----LDEEISQFCKEKGVFYMP 109 (205)
T ss_dssp -ECSS-----CCHHHHHHHHHHTCEEEC
T ss_pred -EcCC-----CCHHHHHHHHHcCCcEEC
Confidence 2211 124689999999999886
No 51
>3qtp_A Enolase 1; glycolysis, lyase; HET: 2PG; 1.90A {Entamoeba histolytica}
Probab=48.95 E-value=1.6e+02 Score=27.00 Aligned_cols=96 Identities=7% Similarity=-0.001 Sum_probs=64.6
Q ss_pred CCHHHHHHHHHHHHhhcCCCcccEEEEecCCCCCCcHHHHHHHHHHHHHcC-cccEEEe--cCCCHHHHHHHHHcCCCee
Q 022300 56 MTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEG-KIKTVAL--TNFDTERLRIILENGIPVV 132 (299)
Q Consensus 56 ~~~~~i~~~ve~SL~~Lg~d~iDl~~lH~pd~~~~~~~~~~~~L~~l~~~G-kir~iGv--s~~~~~~l~~~~~~~~~~~ 132 (299)
.+++.+.+...+-++.. +++++-.|-...+ |+.+.+|.+.- +|--+|= ...+++.++++++. -..+
T Consensus 279 ~t~~elid~y~~lle~y-----pI~~IEDPl~~dD-----~eg~a~Lt~~lg~i~IvGDEl~vTn~~~i~~~Ie~-~a~n 347 (441)
T 3qtp_A 279 KDVDGLIAEYVDYGKHY-----PIASIEDPFAEDD-----WAAWNKFTVEHGNFQIVGDDLLVTNPARVQMAMDK-NACN 347 (441)
T ss_dssp ECHHHHHHHHHHHHHHS-----CEEEEESCSCTTC-----HHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHH-TCCS
T ss_pred cCHHHHHHHHHHHhhhc-----ceeeecCCCChHH-----HHHHHHHHHhcCCceEEeccccccCHHHHHHHHHc-CCCC
Confidence 47788888877777754 4888888765544 34445555543 5666662 23479999999886 3467
Q ss_pred Eeeeccccccc-ChhhHHHHHHHHhCCeEEE
Q 022300 133 SNQVQHSVVDM-RPQQKMAELCQLTGVKLIT 162 (299)
Q Consensus 133 ~~q~~~n~~~~-~~~~~~~~~~~~~gi~v~~ 162 (299)
++|+-.|-.-. ....++..+|+++|++++.
T Consensus 348 ~IlIKvnqiGGITEalkaa~lA~~~G~~vmv 378 (441)
T 3qtp_A 348 SVLIKVNQIGTLTETFKTIKMAQEKGWGVMA 378 (441)
T ss_dssp EEEECGGGTCCHHHHHHHHHHHHHTTCEEEE
T ss_pred EEEecccccccHHHHHHHHHHHHHcCCeEEE
Confidence 77777764321 2235688999999999775
No 52
>3gd6_A Muconate cycloisomerase; structural genomics, NYSGXRC, target 9375A, divergent enolase, lyase, PSI-2; 1.60A {Oceanobacillus iheyensis HTE831} PDB: 2oqy_A 3es8_A 3es7_A 3fyy_A 3hpf_A*
Probab=48.51 E-value=77 Score=28.36 Aligned_cols=104 Identities=8% Similarity=0.035 Sum_probs=66.1
Q ss_pred CCCHHHHHHHHHHHHhhcCCCcccEEEEecCCCCCCcHHHHHHHHHHHHHcCcccEEEecCCCHHHHHHHHHcCCCeeEe
Q 022300 55 KMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILENGIPVVSN 134 (299)
Q Consensus 55 ~~~~~~i~~~ve~SL~~Lg~d~iDl~~lH~pd~~~~~~~~~~~~L~~l~~~Gkir~iGvs~~~~~~l~~~~~~~~~~~~~ 134 (299)
.++.+...+-+ +.|+.+++ ++.++..|-... -++.+.++++.-.|.= |=+-++.+.++.+++. ..++++
T Consensus 197 ~~~~~~A~~~~-~~l~~~~i---~~~~iEqP~~~~-----d~~~~~~l~~~~~iPI-dE~~~~~~~~~~~~~~-~~~d~v 265 (391)
T 3gd6_A 197 LLNWKDAHRAI-KRLTKYDL---GLEMIESPAPRN-----DFDGLYQLRLKTDYPI-SEHVWSFKQQQEMIKK-DAIDIF 265 (391)
T ss_dssp CSCHHHHHHHH-HHHTTCCS---SCCEEECCSCTT-----CHHHHHHHHHHCSSCE-EEECCCHHHHHHHHHH-TCCSEE
T ss_pred CcCHHHHHHHH-HHHHhcCC---CcceecCCCChh-----hHHHHHHHHHHcCCCc-CCCCCCHHHHHHHHHc-CCCCEE
Confidence 34555544332 23444443 335666654322 2566777777766654 8888999999998876 347777
Q ss_pred eecccccc-cChhhHHHHHHHHhCCeEEEccccccc
Q 022300 135 QVQHSVVD-MRPQQKMAELCQLTGVKLITYGTVMGG 169 (299)
Q Consensus 135 q~~~n~~~-~~~~~~~~~~~~~~gi~v~~~~pl~~G 169 (299)
|+..+-+- -..-..+...|+++|+.++..+.+.++
T Consensus 266 ~~k~~~~GGit~~~~ia~~A~~~gi~~~~~~~~es~ 301 (391)
T 3gd6_A 266 NISPVFIGGLTSAKKAAYAAEVASKDVVLGTTQELS 301 (391)
T ss_dssp EECHHHHTSHHHHHHHHHHHHHTTCEEEECCCCCCH
T ss_pred EECchhcCCHHHHHHHHHHHHHcCCEEEecCCCccH
Confidence 87766432 122346899999999999987655444
No 53
>2nql_A AGR_PAT_674P, isomerase/lactonizing enzyme; enolase, structural genomics, protein structure initiative, nysgxrc; 1.80A {Agrobacterium tumefaciens str} PDB: 4dn1_A
Probab=48.05 E-value=33 Score=30.75 Aligned_cols=114 Identities=12% Similarity=0.035 Sum_probs=68.9
Q ss_pred CcEEEEecccCCCCCCCHHHHHHHHHHHHhhcCCCcccEEEEecCCCCCCcHHHHHHHHHHHHHcCcccEEEec-CCCHH
Q 022300 41 SSWISLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALT-NFDTE 119 (299)
Q Consensus 41 ~~i~I~tK~~~~~~~~~~~~i~~~ve~SL~~Lg~d~iDl~~lH~pd~~~~~~~~~~~~L~~l~~~Gkir~iGvs-~~~~~ 119 (299)
.++-|.-+.. ..++.+...+-++. |+.+++++| ..|-.. +-++.+.++++.-.|-=++-- -++.+
T Consensus 207 ~d~~l~vDan---~~~~~~~a~~~~~~-l~~~~i~~i-----EqP~~~-----~d~~~~~~l~~~~~iPI~~dE~~~~~~ 272 (388)
T 2nql_A 207 PQAKIAADMH---WNQTPERALELIAE-MQPFDPWFA-----EAPVWT-----EDIAGLEKVSKNTDVPIAVGEEWRTHW 272 (388)
T ss_dssp TTSEEEEECC---SCSCHHHHHHHHHH-HGGGCCSCE-----ECCSCT-----TCHHHHHHHHTSCCSCEEECTTCCSHH
T ss_pred CCCEEEEECC---CCCCHHHHHHHHHH-HhhcCCCEE-----ECCCCh-----hhHHHHHHHHhhCCCCEEEeCCcCCHH
Confidence 3455555542 24566766666554 777776654 333221 235677777776555544433 44778
Q ss_pred HHHHHHHcCCCeeEeeecccccccChhhHHHHHHHHhCCeEEEccccccc
Q 022300 120 RLRIILENGIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYGTVMGG 169 (299)
Q Consensus 120 ~l~~~~~~~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~~~~pl~~G 169 (299)
.++++++. ...+++|+-.+----..-.++..+|+++|+.++..+-+..+
T Consensus 273 ~~~~~i~~-~~~d~v~ik~~~GGit~~~~i~~~A~~~g~~~~~h~~~es~ 321 (388)
T 2nql_A 273 DMRARIER-CRIAIVQPEMGHKGITNFIRIGALAAEHGIDVIPHATVGAG 321 (388)
T ss_dssp HHHHHHTT-SCCSEECCCHHHHCHHHHHHHHHHHHHHTCEECCCCCSSCS
T ss_pred HHHHHHHc-CCCCEEEecCCCCCHHHHHHHHHHHHHcCCeEEeecCCCcH
Confidence 88888875 34777777655411111246889999999999887554443
No 54
>1kko_A 3-methylaspartate ammonia-lyase; enolase superfamily, TIM barrel; 1.33A {Citrobacter amalonaticus} SCOP: c.1.11.2 d.54.1.1 PDB: 1kkr_A*
Probab=47.26 E-value=1.6e+02 Score=26.49 Aligned_cols=107 Identities=13% Similarity=0.020 Sum_probs=69.7
Q ss_pred CCCHHHHHHHHHHHHhhcCCCcccEEEEecCCCCCCcHHHHHHHHHHHHHc------CcccEEEecCCCHHHHHHHHHcC
Q 022300 55 KMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEE------GKIKTVALTNFDTERLRIILENG 128 (299)
Q Consensus 55 ~~~~~~i~~~ve~SL~~Lg~d~iDl~~lH~pd~~~~~~~~~~~~L~~l~~~------Gkir~iGvs~~~~~~l~~~~~~~ 128 (299)
.++++...+-+++ |+.++.. +++ ++-.|-.... ..+-++.+.+|.+. +---..|=+-++.+.++.+++.
T Consensus 248 ~~~~~~A~~~~~~-L~~~~~~-~~l-~iEqP~~~~~-~~~d~~~~~~l~~~l~~~g~~ipIa~dE~~~~~~~~~~~i~~- 322 (413)
T 1kko_A 248 DMDPVRCAEYIAS-LEKEAQG-LPL-YIEGPVDAGN-KPDQIRMLTAITKELTRLGSGVKIVADEWCNTYQDIVDFTDA- 322 (413)
T ss_dssp TTCHHHHHHHHHH-TGGGGTT-SCE-EEECCCCCSS-HHHHHHHHHHHHHHHHHHTCCCEEEECTTCCSHHHHHHHHHT-
T ss_pred CCCHHHHHHHHHH-HHhccCC-cce-EEECCcCCCC-CcccHHHHHHHHHhcccCCCCCcEEcCCCCCCHHHHHHHHHh-
Confidence 3566766554443 5555542 665 7877754221 24556777777765 3334455566788999998876
Q ss_pred CCeeEeeeccccccc-ChhhHHHHHHHHhCCeEEEcccc
Q 022300 129 IPVVSNQVQHSVVDM-RPQQKMAELCQLTGVKLITYGTV 166 (299)
Q Consensus 129 ~~~~~~q~~~n~~~~-~~~~~~~~~~~~~gi~v~~~~pl 166 (299)
..++++|+-.+-+-. ..-.++..+|+++|+.++..+..
T Consensus 323 ~a~d~i~ik~~~~GGitea~~i~~~A~~~gi~~~~~~~~ 361 (413)
T 1kko_A 323 GSCHMVQIKTPDLGGIHNIVDAVLYCNKHGMEAYQGGTC 361 (413)
T ss_dssp TCCSEEEECGGGGSSTHHHHHHHHHHHHHTCEEEECCCT
T ss_pred CCCCEEEeCccccCCHHHHHHHHHHHHHcCCeEEecCCC
Confidence 457888887775322 22357899999999999997664
No 55
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=46.53 E-value=54 Score=28.90 Aligned_cols=106 Identities=15% Similarity=0.197 Sum_probs=61.2
Q ss_pred CCCCHHHHHHHHHHHHhhcCCCcccEE-----EEecCCCCCCcHHHHHHHHHHHHHc-CcccEEEec--CC-CHHHHHHH
Q 022300 54 VKMTSSIVRESIDVSRRRMDVPCLDML-----QFHWWDYSNPGYLDALNHLTDLKEE-GKIKTVALT--NF-DTERLRII 124 (299)
Q Consensus 54 ~~~~~~~i~~~ve~SL~~Lg~d~iDl~-----~lH~pd~~~~~~~~~~~~L~~l~~~-Gkir~iGvs--~~-~~~~l~~~ 124 (299)
..++.+...+-++ .|.++|+|+|.+- -.-.|+. .+.....++.++++++. ..++...+. +. ....++.+
T Consensus 25 ~~~~~e~k~~i~~-~L~~~Gvd~IEvG~~~g~p~ssp~~-g~~~~~~~e~l~~i~~~~~~~~i~~l~~p~~~~~~~i~~a 102 (345)
T 1nvm_A 25 HQYTLDDVRAIAR-ALDKAKVDSIEVAHGDGLQGSSFNY-GFGRHTDLEYIEAVAGEISHAQIATLLLPGIGSVHDLKNA 102 (345)
T ss_dssp TCCCHHHHHHHHH-HHHHHTCSEEECSCTTSTTCCBTTT-BCCSSCHHHHHHHHHTTCSSSEEEEEECBTTBCHHHHHHH
T ss_pred CCCCHHHHHHHHH-HHHHcCCCEEEEecCCCCCCCCCcc-cCCCCCHHHHHHHHHhhCCCCEEEEEecCCcccHHHHHHH
Confidence 3567777665555 5677999988883 2222221 11123455666666654 234444442 22 46677777
Q ss_pred HHcCCCeeEeeecccccccChhhHHHHHHHHhCCeEEEc
Q 022300 125 LENGIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITY 163 (299)
Q Consensus 125 ~~~~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~~~ 163 (299)
.+.+++...+-...|-. +...+.+++|+++|+.+...
T Consensus 103 ~~aGvd~v~I~~~~s~~--~~~~~~i~~ak~~G~~v~~~ 139 (345)
T 1nvm_A 103 YQAGARVVRVATHCTEA--DVSKQHIEYARNLGMDTVGF 139 (345)
T ss_dssp HHHTCCEEEEEEETTCG--GGGHHHHHHHHHHTCEEEEE
T ss_pred HhCCcCEEEEEEeccHH--HHHHHHHHHHHHCCCEEEEE
Confidence 77776544333333332 23357899999999988775
No 56
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=46.21 E-value=59 Score=28.20 Aligned_cols=106 Identities=15% Similarity=0.144 Sum_probs=62.5
Q ss_pred CCCHHHHHHHHHHHHhhcCCCcccEEEEecCCCCCCcHHHHHHHHHHHHHcCcccEEEecCCCHHHHHHHHHcCCCeeEe
Q 022300 55 KMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILENGIPVVSN 134 (299)
Q Consensus 55 ~~~~~~i~~~ve~SL~~Lg~d~iDl~~lH~pd~~~~~~~~~~~~L~~l~~~Gkir~iGvs~~~~~~l~~~~~~~~~~~~~ 134 (299)
.++.+...+ +-+.|.++|+++|.+-..-+|.. .+.+.+..+.+..+.+...++..++. -+...++.+.+.+++...+
T Consensus 24 ~~~~e~k~~-i~~~L~~~Gv~~IE~g~~~~~~~-~p~~~d~~~~~~~~~~~~~~~~~~l~-~~~~~i~~a~~~g~~~v~i 100 (307)
T 1ydo_A 24 WIATEDKIT-WINQLSRTGLSYIEITSFVHPKW-IPALRDAIDVAKGIDREKGVTYAALV-PNQRGLENALEGGINEACV 100 (307)
T ss_dssp CCCHHHHHH-HHHHHHTTTCSEEEEEECSCTTT-CGGGTTHHHHHHHSCCCTTCEEEEEC-CSHHHHHHHHHHTCSEEEE
T ss_pred CCCHHHHHH-HHHHHHHcCCCEEEECCCcCccc-ccccCCHHHHHHHhhhcCCCeEEEEe-CCHHhHHHHHhCCcCEEEE
Confidence 456666544 45568999999999987655431 12122333444455545566666666 3677888888876553333
Q ss_pred eeccccc------ccCh------hhHHHHHHHHhCCeEEEc
Q 022300 135 QVQHSVV------DMRP------QQKMAELCQLTGVKLITY 163 (299)
Q Consensus 135 q~~~n~~------~~~~------~~~~~~~~~~~gi~v~~~ 163 (299)
-..-|-. .... -.+.+++++++|+.|.++
T Consensus 101 ~~~~sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~v~~~ 141 (307)
T 1ydo_A 101 FMSASETHNRKNINKSTSESLHILKQVNNDAQKANLTTRAY 141 (307)
T ss_dssp EEESSHHHHHTTTCSCHHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred EeecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEE
Confidence 2322211 1111 146789999999988653
No 57
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=46.14 E-value=1.2e+02 Score=26.82 Aligned_cols=110 Identities=5% Similarity=-0.099 Sum_probs=64.2
Q ss_pred cEEEEecccCCCCCCCHHHHHHHHHHHHhhcCCCcccEEEEecCCCCCCcHHHHHHHHHHHHHcCcccEEEe-cCCCHHH
Q 022300 42 SWISLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVAL-TNFDTER 120 (299)
Q Consensus 42 ~i~I~tK~~~~~~~~~~~~i~~~ve~SL~~Lg~d~iDl~~lH~pd~~~~~~~~~~~~L~~l~~~Gkir~iGv-s~~~~~~ 120 (299)
++-|.-+.. ..++.+...+-++. |+.+| + ++..|-. -++.+.++++.-.|-=++- +-++.+.
T Consensus 189 d~~l~vDan---~~~~~~~a~~~~~~-l~~~~-----i-~iE~P~~-------~~~~~~~l~~~~~iPI~~de~i~~~~~ 251 (379)
T 2rdx_A 189 GEKAMADAN---QGWRVDNAIRLARA-TRDLD-----Y-ILEQPCR-------SYEECQQVRRVADQPMKLDECVTGLHM 251 (379)
T ss_dssp TCEEEEECT---TCSCHHHHHHHHHH-TTTSC-----C-EEECCSS-------SHHHHHHHHTTCCSCEEECTTCCSHHH
T ss_pred CCEEEEECC---CCCCHHHHHHHHHH-HHhCC-----e-EEeCCcC-------CHHHHHHHHhhCCCCEEEeCCcCCHHH
Confidence 455554442 23456555444332 44443 3 3444422 3566777777655544433 3456788
Q ss_pred HHHHHHcCCCeeEeeeccccccc-ChhhHHHHHHHHhCCeEEEccccccc
Q 022300 121 LRIILENGIPVVSNQVQHSVVDM-RPQQKMAELCQLTGVKLITYGTVMGG 169 (299)
Q Consensus 121 l~~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~~~gi~v~~~~pl~~G 169 (299)
++++++. ...+++|+..+-.-. ..-..+...|+++|+.++..+-+..+
T Consensus 252 ~~~~i~~-~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~~es~ 300 (379)
T 2rdx_A 252 AQRIVAD-RGAEICCLKISNLGGLSKARRTRDFLIDNRMPVVAEDSWGGE 300 (379)
T ss_dssp HHHHHHH-TCCSEEEEETTTTTSHHHHHHHHHHHHHTTCCEEEECSBCSH
T ss_pred HHHHHHc-CCCCEEEEeccccCCHHHHHHHHHHHHHcCCeEEEeeccCcH
Confidence 8888776 347777877765321 22346899999999999988544443
No 58
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=46.13 E-value=57 Score=29.07 Aligned_cols=102 Identities=13% Similarity=0.090 Sum_probs=59.6
Q ss_pred CCCHHHHHHHHHHHHhhcCCCcccEEEEecCCCCCCcHHHHHHHHHHHHHcCcccEEEec-CCCHHHHHHHHHcCCCeeE
Q 022300 55 KMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALT-NFDTERLRIILENGIPVVS 133 (299)
Q Consensus 55 ~~~~~~i~~~ve~SL~~Lg~d~iDl~~lH~pd~~~~~~~~~~~~L~~l~~~Gkir~iGvs-~~~~~~l~~~~~~~~~~~~ 133 (299)
.++.+...+-++ .|+.+|+++| ..|-.. +-++.+.++++.-.|-=++-- -++.+.++++++. ...++
T Consensus 200 ~~~~~~a~~~~~-~l~~~~i~~i-----EqP~~~-----~~~~~~~~l~~~~~iPI~~de~i~~~~~~~~~i~~-~~~d~ 267 (384)
T 2pgw_A 200 GWSVHDAINMCR-KLEKYDIEFI-----EQPTVS-----WSIPAMAHVREKVGIPIVADQAAFTLYDVYEICRQ-RAADM 267 (384)
T ss_dssp CCCHHHHHHHHH-HHGGGCCSEE-----ECCSCT-----TCHHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHT-TCCSE
T ss_pred CCCHHHHHHHHH-HHHhcCCCEE-----eCCCCh-----hhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHc-CCCCE
Confidence 345665555443 5666665543 333211 224566666665455444433 3467788887775 34677
Q ss_pred eeecccccc-cChhhHHHHHHHHhCCeEEEcccccc
Q 022300 134 NQVQHSVVD-MRPQQKMAELCQLTGVKLITYGTVMG 168 (299)
Q Consensus 134 ~q~~~n~~~-~~~~~~~~~~~~~~gi~v~~~~pl~~ 168 (299)
+|+-.+-.- -..-..+.+.|+++|+.++..+.+..
T Consensus 268 v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~~es 303 (384)
T 2pgw_A 268 ICIGPREIGGIQPMMKAAAVAEAAGLKICIHSSFTT 303 (384)
T ss_dssp EEECHHHHTSHHHHHHHHHHHHHTTCCEEECCCSCC
T ss_pred EEEcchhhCCHHHHHHHHHHHHHCCCeEeeccCcCC
Confidence 777665431 12234689999999999998764444
No 59
>2al1_A Enolase 1, 2-phospho-D-; beta barrel, lyase; HET: PEP 2PG; 1.50A {Saccharomyces cerevisiae} SCOP: c.1.11.1 d.54.1.1 PDB: 1ebg_A 1ebh_A* 1one_A* 2one_A* 1p48_A* 1p43_A* 1l8p_A 4enl_A 1nel_A 1els_A 3enl_A 5enl_A* 6enl_A 7enl_A* 2al2_A* 2al2_B* 2xh7_A* 2xgz_A* 2xh2_A* 2xh4_A* ...
Probab=45.59 E-value=1.8e+02 Score=26.54 Aligned_cols=96 Identities=10% Similarity=0.067 Sum_probs=65.5
Q ss_pred CCHHHHHHHHHHHHhhcCCCcccEEEEecCCCCCCcHHHHHHHHHHHHHcCcccEEEecC--CCHHHHHHHHHcCCCeeE
Q 022300 56 MTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTN--FDTERLRIILENGIPVVS 133 (299)
Q Consensus 56 ~~~~~i~~~ve~SL~~Lg~d~iDl~~lH~pd~~~~~~~~~~~~L~~l~~~Gkir~iGvs~--~~~~~l~~~~~~~~~~~~ 133 (299)
++++...+.+.+.++.. +++++-.|-...+ |+.+.+|.+..+|-=.|=-. .+++.++++++. -..++
T Consensus 273 ~t~~eai~~~~~~l~~y-----~i~~iEdPl~~dD-----~~g~~~l~~~~~ipI~gDE~~vt~~~~~~~~i~~-~a~d~ 341 (436)
T 2al1_A 273 LTGPQLADLYHSLMKRY-----PIVSIEDPFAEDD-----WEAWSHFFKTAGIQIVADDLTVTNPKRIATAIEK-KAADA 341 (436)
T ss_dssp BCHHHHHHHHHHHHHHS-----CEEEEECCSCTTC-----HHHHHHHHTTCCSEEEESTTTTTCHHHHHHHHHT-TCCSE
T ss_pred CCHHHHHHHHHHHHHhC-----CcEEEECCCCCcC-----HHHHHHHHhcCCCeEEECCcccCCHHHHHHHHHh-CCCCE
Confidence 36677666666666654 5888888754433 56777888887776555444 368999999886 34677
Q ss_pred eeecccccc-cChhhHHHHHHHHhCCeEEE
Q 022300 134 NQVQHSVVD-MRPQQKMAELCQLTGVKLIT 162 (299)
Q Consensus 134 ~q~~~n~~~-~~~~~~~~~~~~~~gi~v~~ 162 (299)
+|+-.|-.- -..-.++.++|+++|+.++.
T Consensus 342 i~ikv~qiGGitea~~ia~lA~~~g~~~~~ 371 (436)
T 2al1_A 342 LLLKVNQIGTLSESIKAAQDSFAAGWGVMV 371 (436)
T ss_dssp EEECHHHHCCHHHHHHHHHHHHHTTCEEEE
T ss_pred EEechhhcCCHHHHHHHHHHHHHcCCeEEE
Confidence 777666421 12234789999999998755
No 60
>1x87_A Urocanase protein; structural genomics, protein STR initiative, MCSG, PSI, midwest center for structural genomi; HET: MSE NAD; 2.40A {Geobacillus stearothermophilus} SCOP: e.51.1.1
Probab=45.32 E-value=58 Score=30.37 Aligned_cols=88 Identities=18% Similarity=0.171 Sum_probs=64.6
Q ss_pred HHhhhcCCCcEEEEecccCC----------------CCCCCHHHHHHHHHHHHhhcCCCcccEEEEecCCCCCCcHHHHH
Q 022300 33 EFVERGHQSSWISLTKWVPP----------------PVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDAL 96 (299)
Q Consensus 33 ~~lg~~~R~~i~I~tK~~~~----------------~~~~~~~~i~~~ve~SL~~Lg~d~iDl~~lH~pd~~~~~~~~~~ 96 (299)
+.+|..++..+|+++=+|.= ....++..|. +|+.+.|+|.+- .++++++
T Consensus 154 k~~gg~L~G~~~lTaGLGGMgGAQplA~~mag~v~i~~Evd~~ri~-------~R~~~gyld~~~--------~~ldeal 218 (551)
T 1x87_A 154 QHFGGTLAGTITLTAGLGGMGGAQPLAVTMNGGVCLAIEVDPARIQ-------RRIDTNYLDTMT--------DSLDAAL 218 (551)
T ss_dssp HHSTTCCTTCEEEEECCSTTGGGHHHHHHHTTCEEEEEESCHHHHH-------HHHHTTSCSEEE--------SCHHHHH
T ss_pred HhcCCCCCceEEEEecCCccchhhHHHHHHcCceEEEEEECHHHHH-------HHHhCCCceeEc--------CCHHHHH
Confidence 33444578999999998731 0123455544 455568888742 2289999
Q ss_pred HHHHHHHHcCcccEEEecCCCHHHHHHHHHcCCCeeEee
Q 022300 97 NHLTDLKEEGKIKTVALTNFDTERLRIILENGIPVVSNQ 135 (299)
Q Consensus 97 ~~L~~l~~~Gkir~iGvs~~~~~~l~~~~~~~~~~~~~q 135 (299)
+..++.+++|+..+||+-.--.+.+.++.+.++.++++-
T Consensus 219 ~~~~~a~~~~~~~SIg~~GNaadv~~~l~~~~i~~Dlvt 257 (551)
T 1x87_A 219 EMAKQAKEEKKALSIGLVGNAAEVLPRLVETGFVPDVLT 257 (551)
T ss_dssp HHHHHHHHTTCCEEEEEESCHHHHHHHHHHTTCCCSEEC
T ss_pred HHHHHHHHcCCceEEEEeccHHHHHHHHHHCCCCCCCCC
Confidence 999999999999999999878888899988877666653
No 61
>1uwk_A Urocanate hydratase; hydrolase, urocanase, imidazolonepropionate, histidine metabolism, lyase; HET: NAD URO; 1.19A {Pseudomonas putida} SCOP: e.51.1.1 PDB: 1w1u_A* 1uwl_A* 2v7g_A*
Probab=45.26 E-value=58 Score=30.42 Aligned_cols=88 Identities=17% Similarity=0.205 Sum_probs=64.2
Q ss_pred HHhhhcCCCcEEEEecccCCC----------------CCCCHHHHHHHHHHHHhhcCCCcccEEEEecCCCCCCcHHHHH
Q 022300 33 EFVERGHQSSWISLTKWVPPP----------------VKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDAL 96 (299)
Q Consensus 33 ~~lg~~~R~~i~I~tK~~~~~----------------~~~~~~~i~~~ve~SL~~Lg~d~iDl~~lH~pd~~~~~~~~~~ 96 (299)
+.+|..++..+|+++=+|.=. ...++..|. +|+.+.|+|.+ ..++++++
T Consensus 159 k~~gg~L~G~~~lTaGLGGMgGAQplA~~mag~v~i~~Evd~~ri~-------~R~~~gyld~~--------~~~ldeal 223 (557)
T 1uwk_A 159 QHYGGSLKGKWVLTAGLGGMGGAQPLAATLAGACSLNIESQQSRID-------FRLETRYVDEQ--------ATDLDDAL 223 (557)
T ss_dssp HHTSSCCTTCEEEEECCSTTTTHHHHHHHHTTCEEEEEESCHHHHH-------HHHHTTSCCEE--------CSSHHHHH
T ss_pred HhcCCCCCceEEEEecCCccchhhHHHHHHcCceEEEEEECHHHHH-------HHHhCCCceeE--------cCCHHHHH
Confidence 334445789999999987410 123455444 45556788864 22389999
Q ss_pred HHHHHHHHcCcccEEEecCCCHHHHHHHHHcCCCeeEee
Q 022300 97 NHLTDLKEEGKIKTVALTNFDTERLRIILENGIPVVSNQ 135 (299)
Q Consensus 97 ~~L~~l~~~Gkir~iGvs~~~~~~l~~~~~~~~~~~~~q 135 (299)
+..++.+++|+..+||+-.--.+.+.++.+.++.++++-
T Consensus 224 ~~~~~a~~~~~~~SIg~~GNaadv~~~l~~~~i~~Dlvt 262 (557)
T 1uwk_A 224 VRIAKYTAEGKAISIALHGNAAEILPELVKRGVRPDMVT 262 (557)
T ss_dssp HHHHHHHHTTCCCEEEEESCHHHHHHHHHHHTCCCSEEC
T ss_pred HHHHHHHHcCCceEEEEeccHHHHHHHHHHCCCCCCCCC
Confidence 999999999999999999877888888888877666653
No 62
>3rfa_A Ribosomal RNA large subunit methyltransferase N; radical SAM, S-adenosylmethionine, iron sulfur cluster, oxidoreductase; HET: SAM; 2.05A {Escherichia coli} PDB: 3rf9_A*
Probab=45.08 E-value=1.3e+02 Score=27.16 Aligned_cols=77 Identities=18% Similarity=0.123 Sum_probs=53.0
Q ss_pred HHHHHHHHHHHH-HcCc------ccEEEec--CCCHHHHHHHHHc--CCCeeEeeecccccccCh--------hhHHHHH
Q 022300 92 YLDALNHLTDLK-EEGK------IKTVALT--NFDTERLRIILEN--GIPVVSNQVQHSVVDMRP--------QQKMAEL 152 (299)
Q Consensus 92 ~~~~~~~L~~l~-~~Gk------ir~iGvs--~~~~~~l~~~~~~--~~~~~~~q~~~n~~~~~~--------~~~~~~~ 152 (299)
++++++++..+. +.|. ++++=+. |.+.+.+.++.+. +.+..++-++||+..... -..+.+.
T Consensus 254 le~vl~ai~~~~~~~g~~~~~V~ie~vLI~GvNDs~e~~~~La~ll~~l~~~VnLIpynP~~~~~~~~ps~e~i~~f~~i 333 (404)
T 3rfa_A 254 IETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFPGAPYGRSSNSRIDRFSKV 333 (404)
T ss_dssp HHHHHHHHHHHHHHCTTTTTCEEEEEEEBTTTTCSHHHHHHHHHHTTTSCEEEEEEECCCCTTCCCCBCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCcccEEEEEEEecCCCCCHHHHHHHHHHHHcCCCcEEEEeccCCCCCCCCCCCHHHHHHHHHH
Confidence 688999996654 4454 4444444 5567788887776 566778888999864211 1346777
Q ss_pred HHHhCCeEEEcccccc
Q 022300 153 CQLTGVKLITYGTVMG 168 (299)
Q Consensus 153 ~~~~gi~v~~~~pl~~ 168 (299)
++++|+.+....+.+.
T Consensus 334 L~~~Gi~vtiR~~~G~ 349 (404)
T 3rfa_A 334 LMSYGFTTIVRKTRGD 349 (404)
T ss_dssp HHHTTCEEEECCCCCC
T ss_pred HHHcCCcEEEcCCCCc
Confidence 8889999999877655
No 63
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=43.69 E-value=89 Score=25.01 Aligned_cols=65 Identities=11% Similarity=0.158 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHHHc-CcccEEEecCCC--HHHHHHHHHcCCCeeEeeecccccccChhhHHHHHHHHhCCeEEE
Q 022300 92 YLDALNHLTDLKEE-GKIKTVALTNFD--TERLRIILENGIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLIT 162 (299)
Q Consensus 92 ~~~~~~~L~~l~~~-Gkir~iGvs~~~--~~~l~~~~~~~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~~ 162 (299)
..+++.+|..+++. ++|.-+|+.|.. ...+..++. .++.+..|+- ...-...+..+++.|+.++.
T Consensus 80 ~~Dil~al~~a~~~~~kIavvg~~~~~~~~~~~~~ll~----~~i~~~~~~~--~~e~~~~i~~l~~~G~~vvV 147 (196)
T 2q5c_A 80 RFDTMRAVYNAKRFGNELALIAYKHSIVDKHEIEAMLG----VKIKEFLFSS--EDEITTLISKVKTENIKIVV 147 (196)
T ss_dssp HHHHHHHHHHHGGGCSEEEEEEESSCSSCHHHHHHHHT----CEEEEEEECS--GGGHHHHHHHHHHTTCCEEE
T ss_pred HhHHHHHHHHHHhhCCcEEEEeCcchhhHHHHHHHHhC----CceEEEEeCC--HHHHHHHHHHHHHCCCeEEE
Confidence 46999999999997 667777777654 344555543 3455555543 33335689999999999877
No 64
>2fkn_A Urocanate hydratase; rossman fold, lyase; HET: NAD; 2.20A {Bacillus subtilis}
Probab=43.11 E-value=59 Score=30.34 Aligned_cols=88 Identities=15% Similarity=0.139 Sum_probs=64.3
Q ss_pred HHhhhcCCCcEEEEecccCCC----------------CCCCHHHHHHHHHHHHhhcCCCcccEEEEecCCCCCCcHHHHH
Q 022300 33 EFVERGHQSSWISLTKWVPPP----------------VKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDAL 96 (299)
Q Consensus 33 ~~lg~~~R~~i~I~tK~~~~~----------------~~~~~~~i~~~ve~SL~~Lg~d~iDl~~lH~pd~~~~~~~~~~ 96 (299)
+.+|..++..+|+++=+|.=. ...++..|. +|+.+.|+|.+- .++++++
T Consensus 155 k~~gg~L~G~~~lTaGLGGMgGAQplA~~mag~v~i~~Evd~~ri~-------~R~~~gyld~~~--------~~ldeal 219 (552)
T 2fkn_A 155 QHFGGSLKGTLTLTAGLGGMGGAQPLSVTMNEGVVIAVEVDEKRID-------KRIETKYCDRKT--------ASIEEAL 219 (552)
T ss_dssp HHSSSCCTTCEEEEECCSTTTTHHHHHHHHTTCEEEEEESCHHHHH-------HHHHTTSCSEEE--------SCHHHHH
T ss_pred HhcCCCCCceEEEEecCCccchhhHHHHHHcCceEEEEEECHHHHH-------HHHhCCcceeEc--------CCHHHHH
Confidence 334444788999999987410 123455444 455568888742 2289999
Q ss_pred HHHHHHHHcCcccEEEecCCCHHHHHHHHHcCCCeeEee
Q 022300 97 NHLTDLKEEGKIKTVALTNFDTERLRIILENGIPVVSNQ 135 (299)
Q Consensus 97 ~~L~~l~~~Gkir~iGvs~~~~~~l~~~~~~~~~~~~~q 135 (299)
+..++.+++|+..+||+-.--.+.+.++.+.++.++++-
T Consensus 220 ~~~~~a~~~~~~~SIg~~GNaadv~~~l~~~~i~~Dlvt 258 (552)
T 2fkn_A 220 AWAEEAKLAGKPLSIALLGNAAEVHHTLLNRGVKIDIVT 258 (552)
T ss_dssp HHHHHHHHTTCCEEEEEESCHHHHHHHHHTTTCCCSEEC
T ss_pred HHHHHHHHcCCceEEEEeccHHHHHHHHHHCCCCCCCCC
Confidence 999999999999999999877888888988877666653
No 65
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=42.26 E-value=65 Score=28.31 Aligned_cols=108 Identities=6% Similarity=-0.035 Sum_probs=65.3
Q ss_pred cEEEEecccCCCCCCCHHHHHHHHHHHHhhcCCCcccEEEEecCCCCCCcHHHHHHHHHHHHHcCcccEEEec-CCCHHH
Q 022300 42 SWISLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALT-NFDTER 120 (299)
Q Consensus 42 ~i~I~tK~~~~~~~~~~~~i~~~ve~SL~~Lg~d~iDl~~lH~pd~~~~~~~~~~~~L~~l~~~Gkir~iGvs-~~~~~~ 120 (299)
++-|.-+.. ..++.+...+-++. |+.+|+++| ..|-.. +-++.+.++++.-.|-=++-- -++.+.
T Consensus 189 ~~~l~vDan---~~~~~~~a~~~~~~-l~~~~i~~i-----E~P~~~-----~~~~~~~~l~~~~~iPI~~de~~~~~~~ 254 (359)
T 1mdl_A 189 DFGIMVDYN---QSLDVPAAIKRSQA-LQQEGVTWI-----EEPTLQ-----HDYEGHQRIQSKLNVPVQMGENWLGPEE 254 (359)
T ss_dssp SSEEEEECT---TCSCHHHHHHHHHH-HHHHTCSCE-----ECCSCT-----TCHHHHHHHHHTCSSCEEECTTCCSHHH
T ss_pred CCEEEEECC---CCCCHHHHHHHHHH-HHHhCCCeE-----ECCCCh-----hhHHHHHHHHHhCCCCEEeCCCCCCHHH
Confidence 444444442 23456665555544 666776654 333221 235667777776555544433 457788
Q ss_pred HHHHHHcCCCeeEeeecccccc-cChhhHHHHHHHHhCCeEEEcc
Q 022300 121 LRIILENGIPVVSNQVQHSVVD-MRPQQKMAELCQLTGVKLITYG 164 (299)
Q Consensus 121 l~~~~~~~~~~~~~q~~~n~~~-~~~~~~~~~~~~~~gi~v~~~~ 164 (299)
++++++. ...+++|+-.+-.- -..-.++.+.|+++|+.++...
T Consensus 255 ~~~~i~~-~~~d~v~ik~~~~GGi~~~~~i~~~A~~~g~~~~~~~ 298 (359)
T 1mdl_A 255 MFKALSI-GACRLAMPDAMKIGGVTGWIRASALAQQFGIPMSSHL 298 (359)
T ss_dssp HHHHHHT-TCCSEECCBTTTTTHHHHHHHHHHHHHHTTCCBCCBS
T ss_pred HHHHHHc-CCCCEEeecchhhCCHHHHHHHHHHHHHcCCeEeecc
Confidence 8888875 35777787766532 1223468999999999988864
No 66
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=42.05 E-value=56 Score=28.08 Aligned_cols=106 Identities=11% Similarity=0.071 Sum_probs=60.1
Q ss_pred CCCHHHHHHHHHHHHhhcCCCcccEEEEecCCCCCCcHHHHHHHHHHHHHcCcccEEEecCCCHHHHHHHHHcCCCeeEe
Q 022300 55 KMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILENGIPVVSN 134 (299)
Q Consensus 55 ~~~~~~i~~~ve~SL~~Lg~d~iDl~~lH~pd~~~~~~~~~~~~L~~l~~~Gkir~iGvs~~~~~~l~~~~~~~~~~~~~ 134 (299)
.++.+... .+-+.|.++|+++|.+-..-.|.. .+.+.+..+.+..+++...++..++. .+...++.+.+.+.+...+
T Consensus 23 ~~~~e~k~-~i~~~L~~~Gv~~IE~g~~~~~~~-~p~~~d~~~~~~~~~~~~~~~~~~l~-~~~~~i~~a~~ag~~~v~i 99 (298)
T 2cw6_A 23 IVSTPVKI-KLIDMLSEAGLSVIETTSFVSPKW-VPQMGDHTEVLKGIQKFPGINYPVLT-PNLKGFEAAVAAGAKEVVI 99 (298)
T ss_dssp CCCHHHHH-HHHHHHHHTTCSEECCEECCCTTT-CGGGTTHHHHHHHSCCCTTCBCCEEC-CSHHHHHHHHHTTCSEEEE
T ss_pred CCCHHHHH-HHHHHHHHcCcCEEEECCCcCccc-ccccCCHHHHHHHHhhCCCCEEEEEc-CCHHhHHHHHHCCCCEEEE
Confidence 46677766 555568999999999987555421 11112222333334333233433433 4678888888876654333
Q ss_pred eeccccc------ccC------hhhHHHHHHHHhCCeEEEc
Q 022300 135 QVQHSVV------DMR------PQQKMAELCQLTGVKLITY 163 (299)
Q Consensus 135 q~~~n~~------~~~------~~~~~~~~~~~~gi~v~~~ 163 (299)
-..-|-. ... .-.+.+++++++|+.+..+
T Consensus 100 ~~~~sd~~~~~~~~~~~~e~l~~~~~~i~~a~~~G~~v~~~ 140 (298)
T 2cw6_A 100 FGAASELFTKKNINCSIEESFQRFDAILKAAQSANISVRGY 140 (298)
T ss_dssp EEESCHHHHHHHHSCCHHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred EecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEE
Confidence 3332211 111 1235789999999988654
No 67
>3zxw_B Ribulose bisphosphate carboxylase small chain; CO2/O2 specificity, carbon dioxide fixation, photosynthesis, thermostability; HET: KCX CAP; 2.10A {Thermosynechococcus elongatus} PDB: 2ybv_B*
Probab=41.70 E-value=73 Score=23.59 Aligned_cols=64 Identities=16% Similarity=0.178 Sum_probs=43.4
Q ss_pred CCCCHHHHHHHHHHHHhh---cCCCccc-----EEEE---ecCCCCCCcHHHHHHHHHHHHHc---CcccEEEecCCC
Q 022300 54 VKMTSSIVRESIDVSRRR---MDVPCLD-----MLQF---HWWDYSNPGYLDALNHLTDLKEE---GKIKTVALTNFD 117 (299)
Q Consensus 54 ~~~~~~~i~~~ve~SL~~---Lg~d~iD-----l~~l---H~pd~~~~~~~~~~~~L~~l~~~---Gkir~iGvs~~~ 117 (299)
.+++.+.|.++|+-.|.+ .+++|-| --+. -.|..+..+..+++.+|++++++ ..||-||+.|..
T Consensus 17 P~Lt~eqI~kQV~yll~qGw~~~lE~~d~~~~~~~yW~mWklPmf~~~d~~~Vl~Ele~C~k~~p~~yVRliGfD~~~ 94 (118)
T 3zxw_B 17 PPLSDAQIARQIQYAIDQGYHPCVEFNETSNAEIRYWTMWKLPLFNCTNAQDVLNEVQQCRSEYPNCFIRVVAFDNIK 94 (118)
T ss_dssp CCCCHHHHHHHHHHHHHHTCEEEEEEESCCCTTCCCCEEESSCCTTCCCHHHHHHHHHHHHHHCTTSEEEEEEEETTT
T ss_pred CCCCHHHHHHHHHHHHhCCCeeEEEeccCCCcccCEEeecccCCcCCCCHHHHHHHHHHHHHHCCCceEEEEEEeCCc
Confidence 367889999999999887 2333322 1111 12334444467899999999987 789999998643
No 68
>3lqv_P Splicing factor 3B subunit 1; cysless mutant, PRE-mRNA splicing, adenine, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: ADE; 2.38A {Homo sapiens} PDB: 2f9d_P 2f9j_P
Probab=40.79 E-value=29 Score=20.24 Aligned_cols=24 Identities=13% Similarity=0.225 Sum_probs=16.1
Q ss_pred CHHHHHH-----hHhhhcCCCCHHHHHHH
Q 022300 253 LAEHIQD-----TNAIFMLSLDEDDVNSI 276 (299)
Q Consensus 253 ~~e~l~e-----nl~a~~~~Lt~e~~~~i 276 (299)
+++++.. -+..-+.+||+||+..+
T Consensus 3 tpe~~~~~~~~~ei~~RNrpltDEeLD~m 31 (39)
T 3lqv_P 3 TPEQLQAWRWEREIDERNRPLSDEELDAM 31 (39)
T ss_dssp CHHHHHHHHHHHHHHHTTCCCCHHHHHHT
T ss_pred CHHHHHHHHhhccchhhcCCCCHHHHHHh
Confidence 5555554 45566779999996653
No 69
>1vp8_A Hypothetical protein AF0103; putative pyruvate kinase, structural genomics, joint center structural genomics, JCSG; HET: MSE FMN; 1.30A {Archaeoglobus fulgidus} SCOP: c.49.1.2
Probab=40.53 E-value=1e+02 Score=24.92 Aligned_cols=78 Identities=17% Similarity=0.181 Sum_probs=52.1
Q ss_pred HHHHHHHHHHHHHcCcccEEEecCCCHHHHHHHHHc--CCCeeEeeecccc---cccChhhHHHHHHHHhCCeEEEcccc
Q 022300 92 YLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN--GIPVVSNQVQHSV---VDMRPQQKMAELCQLTGVKLITYGTV 166 (299)
Q Consensus 92 ~~~~~~~L~~l~~~Gkir~iGvs~~~~~~l~~~~~~--~~~~~~~q~~~n~---~~~~~~~~~~~~~~~~gi~v~~~~pl 166 (299)
.+++++...+--++.-|++|=|.+-+.+...++++. ++.+.++--.+.. -..+...+..+..++.|+.|+.-+-+
T Consensus 28 T~~tl~la~era~e~~Ik~iVVAS~sG~TA~k~~e~~~~i~lVvVTh~~GF~~pg~~e~~~e~~~~L~~~G~~V~t~tH~ 107 (201)
T 1vp8_A 28 TEETLRLAVERAKELGIKHLVVASSYGDTAMKALEMAEGLEVVVVTYHTGFVREGENTMPPEVEEELRKRGAKIVRQSHI 107 (201)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEEECSSSHHHHHHHHHCTTCEEEEEECCTTSSSTTCCSSCHHHHHHHHHTTCEEEECCCT
T ss_pred HHHHHHHHHHHHHHcCCCEEEEEeCCChHHHHHHHHhcCCeEEEEeCcCCCCCCCCCcCCHHHHHHHHhCCCEEEEEecc
Confidence 456666555555555699999999988888877775 4444444333332 12233567899999999999986655
Q ss_pred ccc
Q 022300 167 MGG 169 (299)
Q Consensus 167 ~~G 169 (299)
..|
T Consensus 108 lsg 110 (201)
T 1vp8_A 108 LSG 110 (201)
T ss_dssp TTT
T ss_pred ccc
Confidence 544
No 70
>3ik4_A Mandelate racemase/muconate lactonizing protein; structural genomics, enolase, epimerase, PSI-2, protein STRU initiative; 2.10A {Herpetosiphon aurantiacus atcc 23779}
Probab=40.43 E-value=84 Score=27.82 Aligned_cols=87 Identities=11% Similarity=0.040 Sum_probs=56.1
Q ss_pred cccEEEEecCCCCCCcHHHHHHHHHHHHHcCcc-cEEEecCCCHHHHHHHHHcCCCeeEeeeccccccc-ChhhHHHHHH
Q 022300 76 CLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKI-KTVALTNFDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAELC 153 (299)
Q Consensus 76 ~iDl~~lH~pd~~~~~~~~~~~~L~~l~~~Gki-r~iGvs~~~~~~l~~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~ 153 (299)
-+++.++-.|-...+ ++.+.+|++.-.+ -+.|=+-++.+.+..+++. ..++++|+..+- -. ..-..+.+.|
T Consensus 214 ~~~i~~iEeP~~~~d-----~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~-~a~d~v~ik~~~-GGit~~~~i~~~A 286 (365)
T 3ik4_A 214 SIPMVLFEQPLPRED-----WAGMAQVTAQSGFAVAADESARSAHDVLRIARE-GTASVINIKLMK-AGVAEGLKMIAIA 286 (365)
T ss_dssp TCCEEEEECCSCTTC-----HHHHHHHHHHSSSCEEESTTCSSHHHHHHHHHH-TCCSEEEECHHH-HCHHHHHHHHHHH
T ss_pred CCCceEEECCCCccc-----HHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHh-CCCCEEEEcCCc-cCHHHHHHHHHHH
Confidence 346777776643322 3456666665333 3555667788888887765 346777777654 11 1234689999
Q ss_pred HHhCCeEEEccccccc
Q 022300 154 QLTGVKLITYGTVMGG 169 (299)
Q Consensus 154 ~~~gi~v~~~~pl~~G 169 (299)
+++|+.++..+.+.++
T Consensus 287 ~~~gi~~~~~~~~es~ 302 (365)
T 3ik4_A 287 QAAGLGLMIGGMVESI 302 (365)
T ss_dssp HHHTCEEEECCSSCCH
T ss_pred HHcCCeEEecCCcccH
Confidence 9999999998776554
No 71
>3qp1_A CVIR transcriptional regulator; quorum sensing, agonist, antagonist, LUXR, acylated homoseri lactone, transcription factor; HET: HL6; 1.55A {Chromobacterium violaceum} PDB: 3qp2_A* 3qp4_A* 3qp8_A*
Probab=40.38 E-value=1e+02 Score=24.10 Aligned_cols=88 Identities=8% Similarity=0.023 Sum_probs=59.5
Q ss_pred CCCHHHHHHHHHHHHhhcCCCcccEEEEecCCCCCCcHHHHHHHHHHHHHcCcccEEEecCCCHHHHHHHHHc---CCCe
Q 022300 55 KMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN---GIPV 131 (299)
Q Consensus 55 ~~~~~~i~~~ve~SL~~Lg~d~iDl~~lH~pd~~~~~~~~~~~~L~~l~~~Gkir~iGvs~~~~~~l~~~~~~---~~~~ 131 (299)
..+.+.+.+.+++..+.+|.+++=+..++.+...... .+..+-++||+.+..+...+. .+.|
T Consensus 29 a~s~~~l~~~l~~~~~~~Gf~~~~y~~~~~~~~~~~~---------------~~~~~~~~nyP~~W~~~Y~~~~y~~~DP 93 (182)
T 3qp1_A 29 IETENELKAFLDQVLSQAPSERLLLALGRLNNQNQIQ---------------RLERVLNVSYPSDWLDQYMKENYAQHDP 93 (182)
T ss_dssp CCSHHHHHHHHHHHHTTSSCSEEEEEEEEECTTSCEE---------------EEEEEEESSSCHHHHHHHHHTTGGGTCG
T ss_pred cCCHHHHHHHHHHHHHhcCCCeEEEEeecCCCccccc---------------chhhhhhcCCCHHHHHHHHHCCCcccCc
Confidence 3478999999999999999999977776654322110 111367899999988887776 3556
Q ss_pred eEeeecccc--ccc---------ChhhHHHHHHHHhCC
Q 022300 132 VSNQVQHSV--VDM---------RPQQKMAELCQLTGV 158 (299)
Q Consensus 132 ~~~q~~~n~--~~~---------~~~~~~~~~~~~~gi 158 (299)
.+.... +. +.. ..+..+++.++++|+
T Consensus 94 vv~~~~-~~~p~~W~~~~~~~~~~~~~~~~~~a~~~Gl 130 (182)
T 3qp1_A 94 ILRIHL-GQGPVMWEERFNRAKGAEEKRFIAEATQNGM 130 (182)
T ss_dssp GGGSCT-TSCCEEHHHHHHTCCSHHHHHHHHHHHHTTC
T ss_pred chHhhc-CCCCEecCchhhcccChHHHHHHHHHHHcCC
Confidence 655544 32 211 113568999999986
No 72
>3s5s_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-biology, structural genomics, NEW YORK structural genomi research consortium; 2.40A {Sorangium cellulosum}
Probab=40.03 E-value=83 Score=28.17 Aligned_cols=87 Identities=8% Similarity=0.018 Sum_probs=57.1
Q ss_pred cccEEEEecCCCCCCcHHHHHHHHHHHHHcC-cccEEEecCCCHHHHHHHHHcCCCeeEeeeccccccc-ChhhHHHHHH
Q 022300 76 CLDMLQFHWWDYSNPGYLDALNHLTDLKEEG-KIKTVALTNFDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAELC 153 (299)
Q Consensus 76 ~iDl~~lH~pd~~~~~~~~~~~~L~~l~~~G-kir~iGvs~~~~~~l~~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~ 153 (299)
-+++.++-.|-...+ ++.+.+|.+.- ---+.|=|-++...+..+++. ..++++|+..+. -. ..-..+.+.|
T Consensus 215 ~~~i~~iEeP~~~~d-----~~~~~~l~~~~~iPIa~dEs~~~~~~~~~~i~~-~a~d~v~~k~~~-GGit~~~~i~~~A 287 (389)
T 3s5s_A 215 GADVALLEQPVPRDD-----WDGMKEVTRRAGVDVAADESAASAEDVLRVAAE-RAATVVNIKLMK-GGIAEALDIAAVA 287 (389)
T ss_dssp TCEEEEEECCSCTTC-----HHHHHHHHHHSSSCEEESTTCSSHHHHHHHHHT-TCCSEEEECHHH-HHHHHHHHHHHHH
T ss_pred CCCeEEEECCCCccc-----HHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHc-CCCCEEEecCCC-CCHHHHHHHHHHH
Confidence 457777777654333 34555666543 334566677788888888775 346777777654 11 1234688999
Q ss_pred HHhCCeEEEccccccc
Q 022300 154 QLTGVKLITYGTVMGG 169 (299)
Q Consensus 154 ~~~gi~v~~~~pl~~G 169 (299)
+++|+.++..+.+.++
T Consensus 288 ~~~gi~~~~~~~~es~ 303 (389)
T 3s5s_A 288 RAAGLGLMIGGMVESV 303 (389)
T ss_dssp HHTTCEEEECCSSCCH
T ss_pred HHcCCeEEecCCcccH
Confidence 9999999998776554
No 73
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=39.91 E-value=2e+02 Score=25.49 Aligned_cols=106 Identities=13% Similarity=0.001 Sum_probs=63.1
Q ss_pred cEEEEecccCCCCCCCHHHHHHHHHHHHhhcCCCcccEEEEecCCCCCCcHHHHHHHHHHHHHcC-cccEEEecCCCHHH
Q 022300 42 SWISLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEG-KIKTVALTNFDTER 120 (299)
Q Consensus 42 ~i~I~tK~~~~~~~~~~~~i~~~ve~SL~~Lg~d~iDl~~lH~pd~~~~~~~~~~~~L~~l~~~G-kir~iGvs~~~~~~ 120 (299)
++-|.-... ..++.+...+-++. |+..| .|+.++..|-.. +-++.+.++++.- .|-=.+--+.+.+.
T Consensus 190 ~~~l~vDan---~~~~~~~a~~~~~~-l~~~g---~~i~~iEqP~~~-----~~~~~~~~l~~~~~~iPIa~dE~~~~~~ 257 (389)
T 2oz8_A 190 GSKVMIDPN---EAWTSKEALTKLVA-IREAG---HDLLWVEDPILR-----HDHDGLRTLRHAVTWTQINSGEYLDLQG 257 (389)
T ss_dssp TCEEEEECT---TCBCHHHHHHHHHH-HHHTT---CCCSEEESCBCT-----TCHHHHHHHHHHCCSSEEEECTTCCHHH
T ss_pred CCeEEEECC---CCCCHHHHHHHHHH-HHhcC---CCceEEeCCCCC-----cCHHHHHHHHhhCCCCCEEeCCCCCHHH
Confidence 444444432 24567776666544 66622 233345555322 2356677777764 45433333337888
Q ss_pred HHHHHHcCCCeeEeeecccccccChhhHHHHHHHHhCCeEEEc
Q 022300 121 LRIILENGIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITY 163 (299)
Q Consensus 121 l~~~~~~~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~~~ 163 (299)
++++++. ..++++|+. .= -..-..+...|+++|+.++..
T Consensus 258 ~~~~i~~-~~~d~v~ik-GG--it~a~~i~~~A~~~gi~~~~~ 296 (389)
T 2oz8_A 258 KRLLLEA-HAADILNVH-GQ--VTDVMRIGWLAAELGIPISIG 296 (389)
T ss_dssp HHHHHHT-TCCSEEEEC-SC--HHHHHHHHHHHHHHTCCEEEC
T ss_pred HHHHHHc-CCCCEEEEC-cC--HHHHHHHHHHHHHcCCeEeec
Confidence 8888876 347777877 11 112346899999999999998
No 74
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=39.68 E-value=63 Score=28.92 Aligned_cols=100 Identities=8% Similarity=-0.044 Sum_probs=59.4
Q ss_pred CCCHHHHHHHHHHHHhhcCCCcccEEEEecCCCCCCcHHHHHHHHHHHHHcCcccEEE-ecCCCHHHHHHHHHcCCCeeE
Q 022300 55 KMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVA-LTNFDTERLRIILENGIPVVS 133 (299)
Q Consensus 55 ~~~~~~i~~~ve~SL~~Lg~d~iDl~~lH~pd~~~~~~~~~~~~L~~l~~~Gkir~iG-vs~~~~~~l~~~~~~~~~~~~ 133 (299)
.++.+...+-++. |+.+++++| ..|-.. +-++.+.++++.-.|-=++ =+-++.+.++++++. ...++
T Consensus 217 ~~~~~~a~~~~~~-l~~~~i~~i-----E~P~~~-----~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~-~~~d~ 284 (393)
T 2og9_A 217 QWDRPTAQRMCRI-FEPFNLVWI-----EEPLDA-----YDHEGHAALALQFDTPIATGEMLTSAAEHGDLIRH-RAADY 284 (393)
T ss_dssp CCCHHHHHHHHHH-HGGGCCSCE-----ECCSCT-----TCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHT-TCCSE
T ss_pred CCCHHHHHHHHHH-HHhhCCCEE-----ECCCCc-----ccHHHHHHHHHhCCCCEEeCCCcCCHHHHHHHHHC-CCCCE
Confidence 4566666655544 676766654 233221 2245666666654444333 234577888888775 34677
Q ss_pred eeecccccc-cChhhHHHHHHHHhCCeEEEcccc
Q 022300 134 NQVQHSVVD-MRPQQKMAELCQLTGVKLITYGTV 166 (299)
Q Consensus 134 ~q~~~n~~~-~~~~~~~~~~~~~~gi~v~~~~pl 166 (299)
+|+-.+-.- -..-..+.+.|+++|+.++.....
T Consensus 285 v~ik~~~~GGit~~~~i~~~A~~~gi~~~~h~~~ 318 (393)
T 2og9_A 285 LMPDAPRVGGITPFLKIASLAEHAGLMLAPHFAM 318 (393)
T ss_dssp ECCCHHHHTSHHHHHHHHHHHHHTTCEECCCSCH
T ss_pred EeeCccccCCHHHHHHHHHHHHHcCCEEeccCcc
Confidence 777655421 112346899999999999876543
No 75
>2qde_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-II, NYSGXRC, enolase, structural genomics, protei structure initiative, PSI-2; 1.93A {Azoarcus SP}
Probab=39.44 E-value=80 Score=28.26 Aligned_cols=103 Identities=13% Similarity=0.064 Sum_probs=60.3
Q ss_pred CCCHHHHHHHHHHHHhhcCCCcccEEEEecCCCCCCcHHHHHHHHHHHHHcCcccEEE-ecCCCHHHHHHHHHcCCCeeE
Q 022300 55 KMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVA-LTNFDTERLRIILENGIPVVS 133 (299)
Q Consensus 55 ~~~~~~i~~~ve~SL~~Lg~d~iDl~~lH~pd~~~~~~~~~~~~L~~l~~~Gkir~iG-vs~~~~~~l~~~~~~~~~~~~ 133 (299)
.++.+...+-++ .|+.+++++| ..|-.. +-++.+.++++.-.|-=.+ =+-++.+.++++++. ...++
T Consensus 199 ~~~~~~a~~~~~-~l~~~~i~~i-----EqP~~~-----~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~-~~~d~ 266 (397)
T 2qde_A 199 AWTYDQALTTIR-ALEKYNLSKI-----EQPLPA-----WDLDGMARLRGKVATPIYADESAQELHDLLAIINK-GAADG 266 (397)
T ss_dssp CCCHHHHHHHHH-HHGGGCCSCE-----ECCSCT-----TCHHHHHHHHTTCSSCEEESTTCCSHHHHHHHHHH-TCCSE
T ss_pred CCCHHHHHHHHH-HHHhCCCCEE-----ECCCCh-----hhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHc-CCCCE
Confidence 345665555444 4666665543 333221 2355666666664443332 334567788887775 34677
Q ss_pred eeecccccc-cChhhHHHHHHHHhCCeEEEccccccc
Q 022300 134 NQVQHSVVD-MRPQQKMAELCQLTGVKLITYGTVMGG 169 (299)
Q Consensus 134 ~q~~~n~~~-~~~~~~~~~~~~~~gi~v~~~~pl~~G 169 (299)
+|+-.+-.- -..-..+.+.|+++|+.++..+-+.+|
T Consensus 267 v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~~es~ 303 (397)
T 2qde_A 267 LMIKTQKAGGLLKAQRWLTLARLANLPVICGCMVGSG 303 (397)
T ss_dssp EEECHHHHTSHHHHHHHHHHHHHHTCCEEECCCSCCH
T ss_pred EEEeccccCCHHHHHHHHHHHHHcCCeEEEecCcccH
Confidence 777665421 112246899999999999998655544
No 76
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=39.04 E-value=1.9e+02 Score=25.39 Aligned_cols=103 Identities=9% Similarity=-0.021 Sum_probs=60.4
Q ss_pred CCCHHHHHHHHHHHHhhcCCCcccEEEEecCCCCCCcHHHHHHHHHHHHHcCcccEE-EecCCCHHHHHHHHHcCCCeeE
Q 022300 55 KMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTV-ALTNFDTERLRIILENGIPVVS 133 (299)
Q Consensus 55 ~~~~~~i~~~ve~SL~~Lg~d~iDl~~lH~pd~~~~~~~~~~~~L~~l~~~Gkir~i-Gvs~~~~~~l~~~~~~~~~~~~ 133 (299)
.++.+...+-++ .|+.+++++ +..|-.. +-++.+.++++.-.|.=. |=+-++.+.++++++. ...++
T Consensus 198 ~~~~~~a~~~~~-~l~~~~i~~-----iEqP~~~-----~~~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~-~~~d~ 265 (370)
T 1nu5_A 198 GWDEQTASIWIP-RLEEAGVEL-----VEQPVPR-----ANFGALRRLTEQNGVAILADESLSSLSSAFELARD-HAVDA 265 (370)
T ss_dssp CCCHHHHHHHHH-HHHHHTCCE-----EECCSCT-----TCHHHHHHHHHHCSSEEEESTTCCSHHHHHHHHHT-TCCSE
T ss_pred CCCHHHHHHHHH-HHHhcCcce-----EeCCCCc-----ccHHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHh-CCCCE
Confidence 345565555443 466665543 3444221 224556666665444322 2334577888888775 34677
Q ss_pred eeecccccc-cChhhHHHHHHHHhCCeEEEccccccc
Q 022300 134 NQVQHSVVD-MRPQQKMAELCQLTGVKLITYGTVMGG 169 (299)
Q Consensus 134 ~q~~~n~~~-~~~~~~~~~~~~~~gi~v~~~~pl~~G 169 (299)
+|+-.+-.- -..-..+...|+++|+.++..+.+..+
T Consensus 266 v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~~es~ 302 (370)
T 1nu5_A 266 FSLKLCNMGGIANTLKVAAVAEAAGISSYGGTMLDST 302 (370)
T ss_dssp EEECHHHHTSHHHHHHHHHHHHHHTCEEEECCSSCCH
T ss_pred EEEchhhcCCHHHHHHHHHHHHHcCCcEEecCCcchH
Confidence 777665421 122346899999999999988765544
No 77
>2zad_A Muconate cycloisomerase; muconate lactonizing enzyme (MLE), TM0006, struct genomics, NPPSFA; HET: 1PE; 1.60A {Thermotoga maritima} PDB: 3deq_A 3der_A* 3des_A* 3dfy_A
Probab=38.88 E-value=65 Score=28.17 Aligned_cols=105 Identities=8% Similarity=-0.001 Sum_probs=58.8
Q ss_pred CCCHHHHHHHHHHHHhhcCCCcccEEEEecCCCCCCcHHHHHHHHHHHHHcCcccEE-EecCCCHHHHHHHHHcCCCeeE
Q 022300 55 KMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTV-ALTNFDTERLRIILENGIPVVS 133 (299)
Q Consensus 55 ~~~~~~i~~~ve~SL~~Lg~d~iDl~~lH~pd~~~~~~~~~~~~L~~l~~~Gkir~i-Gvs~~~~~~l~~~~~~~~~~~~ 133 (299)
.++.+...+-++. |+.++++ +.++..|-.. +-++.+.++++.-.|.=. |=+-++.+.++++++. ...++
T Consensus 192 ~~~~~~a~~~~~~-l~~~~i~---~~~iE~P~~~-----~~~~~~~~l~~~~~ipia~dE~~~~~~~~~~~i~~-~~~d~ 261 (345)
T 2zad_A 192 GYTQKEAVEFARA-VYQKGID---IAVYEQPVRR-----EDIEGLKFVRFHSPFPVAADESARTKFDVMRLVKE-EAVDY 261 (345)
T ss_dssp CSCHHHHHHHHHH-HHHTTCC---CSEEECCSCT-----TCHHHHHHHHHHSSSCEEESTTCCSHHHHHHHHHH-TCCSE
T ss_pred CCCHHHHHHHHHH-HHhcCCC---eeeeeCCCCc-----ccHHHHHHHHHhCCCCEEEeCCcCCHHHHHHHHHh-CCCCE
Confidence 3456665554433 6665544 1134454322 224555666665444333 3334577788877765 34666
Q ss_pred eeecccccccChhhHHHHHHHHhCCeEEEccccccc
Q 022300 134 NQVQHSVVDMRPQQKMAELCQLTGVKLITYGTVMGG 169 (299)
Q Consensus 134 ~q~~~n~~~~~~~~~~~~~~~~~gi~v~~~~pl~~G 169 (299)
+|+-.+----..-..+...|+++|+.++..+.+..+
T Consensus 262 v~ik~~~GGit~~~~i~~~A~~~g~~~~~~~~~es~ 297 (345)
T 2zad_A 262 VNIKLMKSGISDALAIVEIAESSGLKLMIGCMGESS 297 (345)
T ss_dssp EEECHHHHHHHHHHHHHHHHHTTTCEEEECCSSCCH
T ss_pred EEEecccccHHHHHHHHHHHHHcCCeEEEecCcccH
Confidence 776444300111246889999999999988665443
No 78
>2c35_A Human RPB4, DNA-directed RNA polymerase II 16 kDa polypeptide; transcription, nucleotidyltransferase; 2.70A {Homo sapiens} SCOP: a.60.8.2
Probab=38.67 E-value=1.3e+02 Score=23.09 Aligned_cols=60 Identities=8% Similarity=0.083 Sum_probs=44.2
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHhCCCCceeeeccCCCCHHHHHHhHhhhcCCCCHHHHHHHHHHHhcCCCC
Q 022300 215 QTLKRIASKHGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKKGKDL 286 (299)
Q Consensus 215 ~~l~~la~~~~~s~aq~al~~~l~~~~v~~~i~g~~~~~~e~l~enl~a~~~~Lt~e~~~~i~~~~~~~~~~ 286 (299)
..+.+...+++++..++|.--.+ .+. ++++++-.+...+..+++++++.|-++..+.+.+
T Consensus 91 ~~l~e~L~~~~L~~~E~a~L~NL----------~P~--t~dEar~lipsl~~r~sdEeLe~ILd~l~k~r~f 150 (152)
T 2c35_A 91 ASVRSLLLQKKLHKFELACLANL----------CPE--TAEESKALIPSLEGRFEDEELQQILDDIQTKRSF 150 (152)
T ss_dssp HHHHHHHHTSSCCHHHHHHHHHH----------CCS--SHHHHHHHCGGGTTTSCHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHhcCCCHHHHHHhccC----------CCC--CHHHHHHHHHhhccCCCHHHHHHHHHHHHHHHhh
Confidence 34445556678888776642221 245 8999999999998899999999998888776654
No 79
>1v0l_A Endo-1,4-beta-xylanase A; glycoside hydrolase family 10, xylan degradation, isofagomine, hydrolase; 0.98A {Streptomyces lividans} SCOP: c.1.8.3 PDB: 1e0x_A 1e0w_A* 1od8_A 1v0k_A 1v0m_A 1v0n_A 1e0v_A* 1xas_A 2g3i_A 2g3j_A* 2g4f_A 1v6y_A
Probab=37.76 E-value=1.2e+02 Score=26.24 Aligned_cols=73 Identities=18% Similarity=0.323 Sum_probs=45.0
Q ss_pred HHHHHHHHHHHHcCc-ccEEEecCC------CHHHHHHHHHc----CCCeeEeeecccccccCh--hhHHHHHHHHhC--
Q 022300 93 LDALNHLTDLKEEGK-IKTVALTNF------DTERLRIILEN----GIPVVSNQVQHSVVDMRP--QQKMAELCQLTG-- 157 (299)
Q Consensus 93 ~~~~~~L~~l~~~Gk-ir~iGvs~~------~~~~l~~~~~~----~~~~~~~q~~~n~~~~~~--~~~~~~~~~~~g-- 157 (299)
...++.++.|+++|. |..||+-.| +++.++..++. |.++.+-.+... .... ...+++.|.++.
T Consensus 183 ~~~~~~v~~l~~~G~~iDgIG~Q~H~~~~~~~~~~~~~~l~~~a~~G~pv~iTEldi~--~~qa~~y~~~~~~~~~~~~v 260 (313)
T 1v0l_A 183 QAMYNMVRDFKQRGVPIDCVGFQSHFNSGSPYNSNFRTTLQNFAALGVDVAITELDIQ--GAPASTYANVTNDCLAVSRC 260 (313)
T ss_dssp HHHHHHHHHHHHHTCCCCEEEECCEEBTTBCCCTTHHHHHHHHHTTTCEEEEEEEEET--TCCHHHHHHHHHHHHTCTTE
T ss_pred HHHHHHHHHHHHCCCCcceEEEeEEccCCCCCHHHHHHHHHHHHhcCCeEEEEeCCcc--HHHHHHHHHHHHHHHhcCCc
Confidence 456788888999986 899999644 13444444443 555555444443 1222 246788888875
Q ss_pred CeEEEccccc
Q 022300 158 VKLITYGTVM 167 (299)
Q Consensus 158 i~v~~~~pl~ 167 (299)
.+|+-|..-.
T Consensus 261 ~git~Wg~~D 270 (313)
T 1v0l_A 261 LGITVWGVRD 270 (313)
T ss_dssp EEEEESCSBG
T ss_pred eEEEEECCCC
Confidence 6777775543
No 80
>2o56_A Putative mandelate racemase; dehydratase, structural genomics, protein structure initiati 2; 2.00A {Salmonella typhimurium}
Probab=36.86 E-value=1e+02 Score=27.53 Aligned_cols=110 Identities=7% Similarity=-0.068 Sum_probs=63.3
Q ss_pred cEEEEecccCCCCCCCHHHHHHHHHHHHhhcCCCcccEEEEecCCCCCCcHHHHHHHHHHHHHcCcccEEEec-CCCHHH
Q 022300 42 SWISLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALT-NFDTER 120 (299)
Q Consensus 42 ~i~I~tK~~~~~~~~~~~~i~~~ve~SL~~Lg~d~iDl~~lH~pd~~~~~~~~~~~~L~~l~~~Gkir~iGvs-~~~~~~ 120 (299)
++-|.-... ..++.+...+-++. |+.+++++| ..|-.. +-++.+.++++.-.|-=.+-- -++.+.
T Consensus 215 d~~l~vDan---~~~~~~~a~~~~~~-l~~~~i~~i-----E~P~~~-----~~~~~~~~l~~~~~iPIa~dE~~~~~~~ 280 (407)
T 2o56_A 215 DVDIIAEMH---AFTDTTSAIQFGRM-IEELGIFYY-----EEPVMP-----LNPAQMKQVADKVNIPLAAGERIYWRWG 280 (407)
T ss_dssp TSEEEEECT---TCSCHHHHHHHHHH-HGGGCCSCE-----ECSSCS-----SSHHHHHHHHHHCCSCEEECTTCCHHHH
T ss_pred CCEEEEECC---CCCCHHHHHHHHHH-HHhcCCCEE-----eCCCCh-----hhHHHHHHHHHhCCCCEEeCCCcCCHHH
Confidence 444444442 23456665555543 666655543 333221 224566666665445433333 345677
Q ss_pred HHHHHHcCCCeeEeeecccccc-cChhhHHHHHHHHhCCeEEEcccc
Q 022300 121 LRIILENGIPVVSNQVQHSVVD-MRPQQKMAELCQLTGVKLITYGTV 166 (299)
Q Consensus 121 l~~~~~~~~~~~~~q~~~n~~~-~~~~~~~~~~~~~~gi~v~~~~pl 166 (299)
++++++. ...+++|+-.+-.- -..-..+...|+++|+.++.....
T Consensus 281 ~~~~i~~-~~~d~v~ik~~~~GGite~~~i~~~A~~~g~~~~~h~~~ 326 (407)
T 2o56_A 281 YRPFLEN-GSLSVIQPDICTCGGITEVKKICDMAHVYDKTVQIHVCG 326 (407)
T ss_dssp HHHHHHT-TCCSEECCCTTTTTHHHHHHHHHHHHHTTTCEECCCCCS
T ss_pred HHHHHHc-CCCCEEecCccccCCHHHHHHHHHHHHHcCCeEeecCCC
Confidence 7777775 34777777766431 112346899999999999887664
No 81
>2xvc_A ESCRT-III, SSO0910; cell cycle, cell division, cytokinesis, winged-helix; 2.15A {Sulfolobus solfataricus}
Probab=36.82 E-value=23 Score=22.71 Aligned_cols=18 Identities=28% Similarity=0.387 Sum_probs=16.6
Q ss_pred HHHHHHHHHHHHHcCccc
Q 022300 92 YLDALNHLTDLKEEGKIK 109 (299)
Q Consensus 92 ~~~~~~~L~~l~~~Gkir 109 (299)
-++++.+|..|.++|.|+
T Consensus 39 kdeV~~~LrrLe~KGLI~ 56 (59)
T 2xvc_A 39 KQEVVKLLEALKNKGLIA 56 (59)
T ss_dssp HHHHHHHHHHHHHTTSEE
T ss_pred HHHHHHHHHHHHHCCCee
Confidence 579999999999999987
No 82
>3ijw_A Aminoglycoside N3-acetyltransferase; anthrax, COA, acyltransferase, structural genom center for structural genomics of infectious diseases; HET: MSE ACO; 1.90A {Bacillus anthracis} SCOP: c.140.1.0 PDB: 3slf_A* 3n0s_A* 3slb_A* 3n0m_A* 3kzl_A* 3e4f_A*
Probab=36.38 E-value=53 Score=28.07 Aligned_cols=53 Identities=15% Similarity=0.103 Sum_probs=38.1
Q ss_pred HHHHHHHHhhcCCCcccEEEEecCCC----CCCcHHHHHHHHHHHHH-cCcccEEEec
Q 022300 62 RESIDVSRRRMDVPCLDMLQFHWWDY----SNPGYLDALNHLTDLKE-EGKIKTVALT 114 (299)
Q Consensus 62 ~~~ve~SL~~Lg~d~iDl~~lH~pd~----~~~~~~~~~~~L~~l~~-~Gkir~iGvs 114 (299)
++++.+.|++||+..=|.+++|.--. -...-+.++++|.+++. +|-+-.-..+
T Consensus 17 ~~~l~~~L~~LGi~~Gd~llVHsSl~~lG~v~gg~~~vi~AL~~~vg~~GTLvmPt~t 74 (268)
T 3ijw_A 17 IKTITNDLRKLGLKKGMTVIVHSSLSSIGWISGGAVAVVEALMEVITEEGTIIMPTQS 74 (268)
T ss_dssp HHHHHHHHHHHTCCTTCEEEEEECTGGGCCBTTHHHHHHHHHHHHHCTTSEEEEECCC
T ss_pred HHHHHHHHHHcCCCCCCEEEEEechHHhCCCCCCHHHHHHHHHHHhCCCCeEEEeccc
Confidence 35677788999999999999997421 11224688999988877 6766655443
No 83
>2h9a_B CO dehydrogenase/acetyl-COA synthase, iron- sulfur protein; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_B*
Probab=36.31 E-value=1.8e+02 Score=25.20 Aligned_cols=97 Identities=8% Similarity=0.021 Sum_probs=63.2
Q ss_pred HHHHHHHHHhhcCCCcccEEEEe-cCCCCCCcHHHHHHHHHHHHHc-CcccEEEe-cC----CCHHHHHHHHHcCC--Ce
Q 022300 61 VRESIDVSRRRMDVPCLDMLQFH-WWDYSNPGYLDALNHLTDLKEE-GKIKTVAL-TN----FDTERLRIILENGI--PV 131 (299)
Q Consensus 61 i~~~ve~SL~~Lg~d~iDl~~lH-~pd~~~~~~~~~~~~L~~l~~~-Gkir~iGv-s~----~~~~~l~~~~~~~~--~~ 131 (299)
+.+..++.. ..|.|.||+-.-- +|+......++.++.++.+++. +.. |.+ .+ ++++.++++++.+. ++
T Consensus 76 ~~~~A~~~v-~~GAdiIDIg~~StrP~~~~vs~eee~~vV~~v~~~~~vp--lsI~DT~~~~~~~~V~eaal~aga~~k~ 152 (310)
T 2h9a_B 76 PVAWAKKCV-EYGADIVALRLVSAHPDGQNRSGAELAEVCKAVADAIDVP--LMIIGCGVEEKDAEIFPVIGEALSGRNC 152 (310)
T ss_dssp HHHHHHHHH-HTTCSEEEEECGGGCTTTTCCCHHHHHHHHHHHHHHCSSC--EEEECCSCHHHHHHHHHHHHHHTTTSCC
T ss_pred HHHHHHHHH-HcCCcEEEEeCccCCCCCCCCCHHHHHHHHHHHHHhCCce--EEEECCCCCCCCHHHHHHHHHhCCCCCC
Confidence 333333433 7899999988753 4544323367777788888776 443 455 55 67888888888743 34
Q ss_pred eEeeecccccccChhhHHHHHHHHhCCeEEEccc
Q 022300 132 VSNQVQHSVVDMRPQQKMAELCQLTGVKLITYGT 165 (299)
Q Consensus 132 ~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~~~~p 165 (299)
-++-+.-. ...++++.|.+.|..++.+.+
T Consensus 153 iINdvs~~-----~~~~~~~~aa~~g~~vv~m~~ 181 (310)
T 2h9a_B 153 LLSSATKD-----NYKPIVATCMVHGHSVVASAP 181 (310)
T ss_dssp EEEEECTT-----THHHHHHHHHHHTCEEEEECS
T ss_pred EEEECCCC-----ccHHHHHHHHHhCCCEEEECh
Confidence 44444321 235789999999999999865
No 84
>3u9i_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, PSI-biology; 2.90A {Roseiflexus SP}
Probab=35.91 E-value=1e+02 Score=27.67 Aligned_cols=71 Identities=13% Similarity=0.078 Sum_probs=47.2
Q ss_pred HHHHHHHHcCcc-cEEEecCCCHHHHHHHHHcCCCeeEeeeccccccc-ChhhHHHHHHHHhCCeEEEccccccc
Q 022300 97 NHLTDLKEEGKI-KTVALTNFDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAELCQLTGVKLITYGTVMGG 169 (299)
Q Consensus 97 ~~L~~l~~~Gki-r~iGvs~~~~~~l~~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~~~gi~v~~~~pl~~G 169 (299)
+.+.+|.+.-.+ -+.|=+-++...+..+++. ..++++|+.... -. ..-..+.+.|+++|+.++..+.+.++
T Consensus 260 ~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~-~a~d~i~~k~~~-GGit~~~~ia~~A~~~gi~~~~~~~~es~ 332 (393)
T 3u9i_A 260 EGLRRLTATRRVPVAADESVASATDAARLARN-AAVDVLNIKLMK-CGIVEALDIAAIARTAGLHLMIGGMVESL 332 (393)
T ss_dssp THHHHHHHTCSSCEEESTTCCSHHHHHHHHHT-TCCSEEEECHHH-HCHHHHHHHHHHHHHHTCEEEECCSSCCH
T ss_pred HHHHHHHhhCCCcEEeCCcCCCHHHHHHHHHc-CCCCEEEecccc-cCHHHHHHHHHHHHHcCCeEEecCCcccH
Confidence 445555555333 3556667788888888775 346777777654 11 12346899999999999988766554
No 85
>2p8b_A Mandelate racemase/muconate lactonizing enzyme family protein; enolase superfamily, prediction of function; HET: NSK; 1.70A {Bacillus cereus atcc 14579} PDB: 2p88_A* 2p8c_A*
Probab=35.81 E-value=57 Score=28.82 Aligned_cols=72 Identities=10% Similarity=0.145 Sum_probs=45.9
Q ss_pred HHHHHHHHHcCcccEEE-ecCCCHHHHHHHHHcCCCeeEeeeccccccc-ChhhHHHHHHHHhCCeEEEcccccc
Q 022300 96 LNHLTDLKEEGKIKTVA-LTNFDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAELCQLTGVKLITYGTVMG 168 (299)
Q Consensus 96 ~~~L~~l~~~Gkir~iG-vs~~~~~~l~~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~~~gi~v~~~~pl~~ 168 (299)
++.+.++++.-.|-=.+ =+-++.+.++++++. ...+++|+..+-.-. ..-..+...|+++|+.++..+.+..
T Consensus 226 ~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~-~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~~es 299 (369)
T 2p8b_A 226 IDAMAHIRSKTDLPLMIDEGLKSSREMRQIIKL-EAADKVNIKLMKCGGIYPAVKLAHQAEMAGIECQVGSMVES 299 (369)
T ss_dssp HHHHHHHHHTCCSCEEESTTCCSHHHHHHHHHH-TCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEECCSSCC
T ss_pred HHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHh-CCCCEEEeecchhCCHHHHHHHHHHHHHcCCcEEecCCCcc
Confidence 55666777665544333 234577888887775 346777776654211 1224689999999999988765543
No 86
>2akz_A Gamma enolase, neural; fluoride inhibition, negative cooperativity, glycolysis, , isothermal titration calorimetry, lyase; 1.36A {Homo sapiens} SCOP: c.1.11.1 d.54.1.1 PDB: 2akm_A 1te6_A 2psn_A 3b97_A 2xsx_A 1pdz_A 1pdy_A
Probab=34.95 E-value=2.6e+02 Score=25.42 Aligned_cols=96 Identities=9% Similarity=0.033 Sum_probs=66.9
Q ss_pred CCHHHHHHHHHHHHhhcCCCcccEEEEecCCCCCCcHHHHHHHHHHHHHcCcccEEEecC--CCHHHHHHHHHcCCCeeE
Q 022300 56 MTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTN--FDTERLRIILENGIPVVS 133 (299)
Q Consensus 56 ~~~~~i~~~ve~SL~~Lg~d~iDl~~lH~pd~~~~~~~~~~~~L~~l~~~Gkir~iGvs~--~~~~~l~~~~~~~~~~~~ 133 (299)
++++.+.+.+.+.++.. +++++-.|-...+ |+.+.+|.+..+|-=.|=-. .+++.++++++. -..++
T Consensus 270 ~t~~e~~~~~~~ll~~y-----~i~~IEdPl~~dD-----~~g~~~L~~~~~ipI~gDE~~vt~~~~~~~~i~~-~a~d~ 338 (439)
T 2akz_A 270 ITGDQLGALYQDFVRDY-----PVVSIEDPFDQDD-----WAAWSKFTANVGIQIVGDDLTVTNPKRIERAVEE-KACNC 338 (439)
T ss_dssp BCHHHHHHHHHHHHHHS-----CEEEEECCSCTTC-----HHHHHHHHHTCSSEEEESTTTTTCHHHHHHHHHT-TCCSE
T ss_pred CCHHHHHHHHHHHHHhC-----CCcEEECCCCccc-----HHHHHHHHhCCCCEEEeCCCccCCHHHHHHHHHh-CCCCE
Confidence 36777767777666654 5888988754433 67788888887776655333 388999999886 34677
Q ss_pred eeecccccc-cChhhHHHHHHHHhCCeEEE
Q 022300 134 NQVQHSVVD-MRPQQKMAELCQLTGVKLIT 162 (299)
Q Consensus 134 ~q~~~n~~~-~~~~~~~~~~~~~~gi~v~~ 162 (299)
+|+-.|-.- -..-.++.++|+++|+.++.
T Consensus 339 i~iKv~qiGGitea~~ia~lA~~~g~~~~~ 368 (439)
T 2akz_A 339 LLLKVNQIGSVTEAIQACKLAQENGWGVMV 368 (439)
T ss_dssp EEECHHHHCCHHHHHHHHHHHHHTTCEEEE
T ss_pred EEechhhcCCHHHHHHHHHHHHHCCCeEEe
Confidence 777766421 12234789999999998755
No 87
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=34.72 E-value=2.3e+02 Score=24.66 Aligned_cols=101 Identities=7% Similarity=-0.010 Sum_probs=64.6
Q ss_pred CCHHHHHHHHHHHHhhcCCCcccEEEEe-cCCCC-----CC---cHHHHHHHHHHHHHcCcccEEEecCCCHHHHHHHHH
Q 022300 56 MTSSIVRESIDVSRRRMDVPCLDMLQFH-WWDYS-----NP---GYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILE 126 (299)
Q Consensus 56 ~~~~~i~~~ve~SL~~Lg~d~iDl~~lH-~pd~~-----~~---~~~~~~~~L~~l~~~Gkir~iGvs~~~~~~l~~~~~ 126 (299)
.+.+.+.+..++ +-.=|.|.||+-.-- +|... .+ .++.+...++.+++.-. --|.|-++.++.++++++
T Consensus 46 ~~~~~al~~A~~-~v~~GAdIIDIGgeSTrPga~~~~~~V~~~eE~~Rv~pvI~~l~~~~~-vpISIDT~~~~Va~aAl~ 123 (314)
T 3tr9_A 46 LDLNSALRTAEK-MVDEGADILDIGGEATNPFVDIKTDSPSTQIELDRLLPVIDAIKKRFP-QLISVDTSRPRVMREAVN 123 (314)
T ss_dssp CSHHHHHHHHHH-HHHTTCSEEEEECCCSCTTC-----CHHHHHHHHHHHHHHHHHHHHCC-SEEEEECSCHHHHHHHHH
T ss_pred CCHHHHHHHHHH-HHHCCCCEEEECCCCCCCCcccccCCCCHHHHHHHHHHHHHHHHhhCC-CeEEEeCCCHHHHHHHHH
Confidence 356666666555 334589999998543 44332 11 12236677777776522 358888999999999999
Q ss_pred cCCCeeEeeecccccccChhhHHHHHHHHhCCeEEEcc
Q 022300 127 NGIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYG 164 (299)
Q Consensus 127 ~~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~~~~ 164 (299)
.|..+. | ..|.+. ..++++.+++.|+.++.+-
T Consensus 124 aGa~iI-N--DVsg~~---~~~m~~v~a~~g~~vVlMh 155 (314)
T 3tr9_A 124 TGADMI-N--DQRALQ---LDDALTTVSALKTPVCLMH 155 (314)
T ss_dssp HTCCEE-E--ETTTTC---STTHHHHHHHHTCCEEEEC
T ss_pred cCCCEE-E--ECCCCC---chHHHHHHHHhCCeEEEEC
Confidence 864432 2 222222 2368999999999999864
No 88
>4hv0_A AVTR; ribbon-helix-helix, DNA, transcription, viral protein; 2.60A {Acidianus filamentous virus 6}
Probab=34.40 E-value=57 Score=23.34 Aligned_cols=27 Identities=26% Similarity=0.456 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHh
Q 022300 212 VLLQTLKRIASKHGVSIPVVAVRYILD 238 (299)
Q Consensus 212 ~~~~~l~~la~~~~~s~aq~al~~~l~ 238 (299)
++++.|+++|++-|.|++.++=+.+..
T Consensus 8 slY~~LkelAe~EGvSvSav~RkLL~E 34 (106)
T 4hv0_A 8 EVYEFLKKKAKEEGTSVPAVIRKILKE 34 (106)
T ss_dssp HHHHHHHHHHHHTTSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 457899999999999999988776654
No 89
>2nyg_A YOKD protein; PFAM02522, NYSGXRC, aminoglycoside 3-N- acetyltransferase, PSI-2, structural genomics, protein structure initiative; HET: COA; 2.60A {Bacillus subtilis} SCOP: c.140.1.2
Probab=34.32 E-value=63 Score=27.63 Aligned_cols=52 Identities=19% Similarity=0.193 Sum_probs=36.6
Q ss_pred HHHHHHHHhhcCCCcccEEEEecCC----CCCCcHHHHHHHHHHHHH-cCcccEEEe
Q 022300 62 RESIDVSRRRMDVPCLDMLQFHWWD----YSNPGYLDALNHLTDLKE-EGKIKTVAL 113 (299)
Q Consensus 62 ~~~ve~SL~~Lg~d~iDl~~lH~pd----~~~~~~~~~~~~L~~l~~-~Gkir~iGv 113 (299)
++.+.+.|+.||+..=|.+++|.-- .-...-+.++++|.+++. +|-+-.=.+
T Consensus 15 ~~~L~~~L~~LGI~~Gd~llVHsSl~~lG~v~gg~~~vi~AL~~~vg~~GTLvmPtf 71 (273)
T 2nyg_A 15 KQSITEDLKALGLKKGMTVLVHSSLSSIGWVNGGAVAVIQALIDVVTEEGTIVMPSQ 71 (273)
T ss_dssp HHHHHHHHHHHTCCTTCEEEEEECSGGGCCBTTHHHHHHHHHHHHHTTTSEEEEECC
T ss_pred HHHHHHHHHHcCCCCCCEEEEEechHHhCCCCCCHHHHHHHHHHHhCCCCeEEEecc
Confidence 3557777889999999999999742 112224678999988775 676554333
No 90
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=34.24 E-value=2.4e+02 Score=24.72 Aligned_cols=100 Identities=12% Similarity=0.012 Sum_probs=60.1
Q ss_pred CCCHHHHHHHHHHHHhhcCCCcccEEEEecCCCCCCcHHHHHHHHHHHHHcCcccEEE-ecCCCHHHHHHHHHcCCCeeE
Q 022300 55 KMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVA-LTNFDTERLRIILENGIPVVS 133 (299)
Q Consensus 55 ~~~~~~i~~~ve~SL~~Lg~d~iDl~~lH~pd~~~~~~~~~~~~L~~l~~~Gkir~iG-vs~~~~~~l~~~~~~~~~~~~ 133 (299)
.++.+...+-++. |+.+|+++ +..|-.. +-++.+.++++.-.|-=++ =+-++.+.++++++. ...++
T Consensus 201 ~~~~~~a~~~~~~-l~~~~i~~-----iEqP~~~-----~d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~-~~~d~ 268 (371)
T 2ovl_A 201 KWTVDGAIRAARA-LAPFDLHW-----IEEPTIP-----DDLVGNARIVRESGHTIAGGENLHTLYDFHNAVRA-GSLTL 268 (371)
T ss_dssp CSCHHHHHHHHHH-HGGGCCSE-----EECCSCT-----TCHHHHHHHHHHHCSCEEECTTCCSHHHHHHHHHH-TCCSE
T ss_pred CCCHHHHHHHHHH-HHhcCCCE-----EECCCCc-----ccHHHHHHHHhhCCCCEEeCCCCCCHHHHHHHHHc-CCCCE
Confidence 3466665555543 66666553 3444322 2245566666654444333 334577888888776 34777
Q ss_pred eeecccccc-cChhhHHHHHHHHhCCeEEEcccc
Q 022300 134 NQVQHSVVD-MRPQQKMAELCQLTGVKLITYGTV 166 (299)
Q Consensus 134 ~q~~~n~~~-~~~~~~~~~~~~~~gi~v~~~~pl 166 (299)
+|+-.+-.- -..-.++.+.|+++|+.++....+
T Consensus 269 v~ik~~~~GGi~~~~~i~~~A~~~gi~~~~h~~~ 302 (371)
T 2ovl_A 269 PEPDVSNIGGYTTFRKVAALAEANNMLLTSHGVH 302 (371)
T ss_dssp ECCCTTTTTSHHHHHHHHHHHHHTTCCEEECSCH
T ss_pred EeeCccccCCHHHHHHHHHHHHHcCCeEccccHH
Confidence 787766532 122346899999999999987654
No 91
>2pp0_A L-talarate/galactarate dehydratase; enolase superfamily, LYA; 2.20A {Salmonella typhimurium} PDB: 2pp1_A* 2pp3_A*
Probab=34.19 E-value=85 Score=28.14 Aligned_cols=100 Identities=9% Similarity=-0.061 Sum_probs=57.9
Q ss_pred CCCHHHHHHHHHHHHhhcCCCcccEEEEecCCCCCCcHHHHHHHHHHHHHcCcccEEE-ecCCCHHHHHHHHHcCCCeeE
Q 022300 55 KMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVA-LTNFDTERLRIILENGIPVVS 133 (299)
Q Consensus 55 ~~~~~~i~~~ve~SL~~Lg~d~iDl~~lH~pd~~~~~~~~~~~~L~~l~~~Gkir~iG-vs~~~~~~l~~~~~~~~~~~~ 133 (299)
.++.+...+-++. |+.+++++| ..|-.. +-++.+.++++.-.|-=.+ =+-++.+.++++++. ...++
T Consensus 230 ~~~~~~ai~~~~~-l~~~~i~~i-----EqP~~~-----~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~-~~~d~ 297 (398)
T 2pp0_A 230 QWDRETAIRMGRK-MEQFNLIWI-----EEPLDA-----YDIEGHAQLAAALDTPIATGEMLTSFREHEQLILG-NASDF 297 (398)
T ss_dssp CSCHHHHHHHHHH-HGGGTCSCE-----ECCSCT-----TCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHT-TCCSE
T ss_pred CCCHHHHHHHHHH-HHHcCCcee-----eCCCCh-----hhHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHc-CCCCE
Confidence 3456665555544 666665543 333221 2245566666654444333 334567888888775 34677
Q ss_pred eeecccccc-cChhhHHHHHHHHhCCeEEEcccc
Q 022300 134 NQVQHSVVD-MRPQQKMAELCQLTGVKLITYGTV 166 (299)
Q Consensus 134 ~q~~~n~~~-~~~~~~~~~~~~~~gi~v~~~~pl 166 (299)
+|+-.+-.- -..-..+.+.|+++|+.++.+...
T Consensus 298 v~ik~~~~GGite~~~i~~~A~~~gi~~~~h~~~ 331 (398)
T 2pp0_A 298 VQPDAPRVGGISPFLKIMDLAAKHGRKLAPHFAM 331 (398)
T ss_dssp ECCCHHHHTSHHHHHHHHHHHHHTTCEECCCSCH
T ss_pred EEeCccccCCHHHHHHHHHHHHHcCCeEeecCcc
Confidence 777655321 112346899999999999876543
No 92
>3bjs_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI-2, protein struc initiative; 2.70A {Polaromonas SP}
Probab=33.24 E-value=92 Score=28.27 Aligned_cols=97 Identities=9% Similarity=0.016 Sum_probs=59.8
Q ss_pred CCCHHHHHHHHHHHHhhcCCCcccEEEEecCCCCCCcHHHHHHHHHHHHHcCc-ccEE-EecCCCHHHHHHHHHcCCCee
Q 022300 55 KMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGK-IKTV-ALTNFDTERLRIILENGIPVV 132 (299)
Q Consensus 55 ~~~~~~i~~~ve~SL~~Lg~d~iDl~~lH~pd~~~~~~~~~~~~L~~l~~~Gk-ir~i-Gvs~~~~~~l~~~~~~~~~~~ 132 (299)
.++.+...+-++. |+.+++++| ..|-.. +-++.+.++++.-. |-=. |=+-++.+.++++++. ...+
T Consensus 239 ~~~~~eai~~~~~-L~~~~i~~i-----EqP~~~-----~d~~~~~~l~~~~~~iPIa~dE~~~~~~~~~~~i~~-~~~d 306 (428)
T 3bjs_A 239 AYTMADARRVLPV-LAEIQAGWL-----EEPFAC-----NDFASYREVAKITPLVPIAAGENHYTRFEFGQMLDA-GAVQ 306 (428)
T ss_dssp CCCHHHHHHHHHH-HHHTTCSCE-----ECCSCT-----TCHHHHHHHTTTCSSSCEEECTTCCSHHHHHHHHTT-CCEE
T ss_pred CCCHHHHHHHHHH-HHhcCCCEE-----ECCCCc-----cCHHHHHHHHHhCCCCcEEcCCCcCCHHHHHHHHHh-CCCC
Confidence 4566666555544 666666543 333221 23566677776543 4333 3334578888888875 4588
Q ss_pred Eeeeccccccc-ChhhHHHHHHHHhCCeEEEc
Q 022300 133 SNQVQHSVVDM-RPQQKMAELCQLTGVKLITY 163 (299)
Q Consensus 133 ~~q~~~n~~~~-~~~~~~~~~~~~~gi~v~~~ 163 (299)
++|+-.+-.-. ..-..+.+.|+++|+.++..
T Consensus 307 ~v~ik~~~~GGitea~~ia~~A~~~gi~~~~~ 338 (428)
T 3bjs_A 307 VWQPDLSKCGGITEGIRIAAMASAYRIPINAH 338 (428)
T ss_dssp EECCBTTTSSCHHHHHHHHHHHHHTTCCBCCB
T ss_pred EEEeCccccCCHHHHHHHHHHHHHcCCeEEec
Confidence 88887765321 22357899999999998887
No 93
>1y14_A B32, RPB4, DNA-directed RNA polymerase II 32 kDa polypeptide; transferase; 2.30A {Saccharomyces cerevisiae} SCOP: a.60.8.2
Probab=32.97 E-value=1.9e+02 Score=23.17 Aligned_cols=57 Identities=11% Similarity=0.113 Sum_probs=41.0
Q ss_pred HHHHHHHhCCCHHHHHHHHHHhCCCCceeeeccCCCCHHHHHHhHhhhcCCCCHHHHHHHHHHHhcCCC
Q 022300 217 LKRIASKHGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKKGKD 285 (299)
Q Consensus 217 l~~la~~~~~s~aq~al~~~l~~~~v~~~i~g~~~~~~e~l~enl~a~~~~Lt~e~~~~i~~~~~~~~~ 285 (299)
+.+....++++..++|. +.+ +.+. ++++++-.+......+++++++.|-....+.+.
T Consensus 129 lre~L~~~kL~efE~aq--LaN--------L~Pe--TadEaraLIpSle~rlsdEeLeeILd~L~k~r~ 185 (187)
T 1y14_A 129 VIQLLKSTGLHPFEVAQ--LGS--------LACD--TADEAKTLIPSLNNKISDDELERILKELSNLET 185 (187)
T ss_dssp HHHHHHTTTCCHHHHHH--HHH--------SCCS--SHHHHHHHSGGGTTTSCHHHHHHHHHHHHHHCC
T ss_pred HHHHHHhcCCCHHHHHH--cCc--------CCCC--CHHHHHHHHHhhccCCCHHHHHHHHHHHHHhhc
Confidence 33333457788777654 111 1345 899999999999889999999999888777654
No 94
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=32.95 E-value=2.6e+02 Score=24.84 Aligned_cols=100 Identities=11% Similarity=0.152 Sum_probs=67.6
Q ss_pred CCHHHHHHHHHHHHhhcCCCcccEEEEecCCCCCCcHHHHHHHHHHHHHcCcccEEEecCCCHHHHHHHHHcCCCeeEee
Q 022300 56 MTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILENGIPVVSNQ 135 (299)
Q Consensus 56 ~~~~~i~~~ve~SL~~Lg~d~iDl~~lH~pd~~~~~~~~~~~~L~~l~~~Gkir~iGvs~~~~~~l~~~~~~~~~~~~~q 135 (299)
.+.+...+++.+ |.+-|.|-+++= .+ .++..+++..+++.=.+--++=-.|++..+.++++.+..-
T Consensus 43 ~D~~atv~Qi~~-l~~aG~diVRva--------vp-~~~~a~al~~I~~~~~vPlvaDiHf~~~lal~a~e~G~dk---- 108 (366)
T 3noy_A 43 HDVEATLNQIKR-LYEAGCEIVRVA--------VP-HKEDVEALEEIVKKSPMPVIADIHFAPSYAFLSMEKGVHG---- 108 (366)
T ss_dssp TCHHHHHHHHHH-HHHTTCCEEEEE--------CC-SHHHHHHHHHHHHHCSSCEEEECCSCHHHHHHHHHTTCSE----
T ss_pred cCHHHHHHHHHH-HHHcCCCEEEeC--------CC-ChHHHHHHHHHHhcCCCCEEEeCCCCHHHHHHHHHhCCCe----
Confidence 456666677664 778898888872 22 2455789999998866666666689999888888875432
Q ss_pred ecccccccC---hhhHHHHHHHHhCCeEEE---ccccccc
Q 022300 136 VQHSVVDMR---PQQKMAELCQLTGVKLIT---YGTVMGG 169 (299)
Q Consensus 136 ~~~n~~~~~---~~~~~~~~~~~~gi~v~~---~~pl~~G 169 (299)
+.+|+-+-. .-.++++.|+++|+.+-. +..|...
T Consensus 109 lRINPGNig~~~~~~~vv~~ak~~~~piRIGvN~GSL~~~ 148 (366)
T 3noy_A 109 IRINPGNIGKEEIVREIVEEAKRRGVAVRIGVNSGSLEKD 148 (366)
T ss_dssp EEECHHHHSCHHHHHHHHHHHHHHTCEEEEEEEGGGCCHH
T ss_pred EEECCcccCchhHHHHHHHHHHHcCCCEEEecCCcCCCHH
Confidence 455554332 124699999999987744 4445443
No 95
>3q45_A Mandelate racemase/muconate lactonizing enzyme FA possible chloromuconate cycloisomerase...; (beta/alpha)8-barrel; 3.00A {Cytophaga hutchinsonii} PDB: 3q4d_A
Probab=32.37 E-value=86 Score=27.75 Aligned_cols=73 Identities=8% Similarity=0.041 Sum_probs=48.7
Q ss_pred HHHHHHHHHcCccc-EEEecCCCHHHHHHHHHcCCCeeEeeeccccccc-ChhhHHHHHHHHhCCeEEEccccccc
Q 022300 96 LNHLTDLKEEGKIK-TVALTNFDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAELCQLTGVKLITYGTVMGG 169 (299)
Q Consensus 96 ~~~L~~l~~~Gkir-~iGvs~~~~~~l~~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~~~gi~v~~~~pl~~G 169 (299)
++.+.++++.-.|. ..|=+-++.+++..+++. ..++++|+..+-.-. ..-..+.+.|+++|+.++..+.+.++
T Consensus 224 ~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~-~~~d~v~~k~~~~GGit~~~~i~~~A~~~gi~~~~~~~~es~ 298 (368)
T 3q45_A 224 YTALPKIRQACRIPIMADESCCNSFDAERLIQI-QACDSFNLKLSKSAGITNALNIIRLAEQAHMPVQVGGFLESR 298 (368)
T ss_dssp GGGHHHHHHTCSSCEEESTTCCSHHHHHHHHHT-TCCSEEEECTTTTTSHHHHHHHHHHHHHTTCCEEECCSSCCH
T ss_pred HHHHHHHHhhCCCCEEEcCCcCCHHHHHHHHHc-CCCCeEEechhhcCCHHHHHHHHHHHHHcCCcEEecCccccH
Confidence 45566666654443 344456788888888875 357788887765321 22356899999999999987666443
No 96
>2p0o_A Hypothetical protein DUF871; structural genomics, TIM barrel, PF05 2, protein structure initiative, midwest center for structu genomics; 2.15A {Enterococcus faecalis}
Probab=32.14 E-value=2.5e+02 Score=25.07 Aligned_cols=150 Identities=11% Similarity=0.070 Sum_probs=86.5
Q ss_pred HHHhhcCCCcccEEEEecC-------CCCCCcHHHHHHHHHHHHHcCcccEEEecCCCHHHHHHHHHcCCCeeEeeeccc
Q 022300 67 VSRRRMDVPCLDMLQFHWW-------DYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILENGIPVVSNQVQHS 139 (299)
Q Consensus 67 ~SL~~Lg~d~iDl~~lH~p-------d~~~~~~~~~~~~L~~l~~~Gkir~iGvs~~~~~~l~~~~~~~~~~~~~q~~~n 139 (299)
.+|+.||.+|=|+-.+|.. |..-. .+ ....|-++ .--.+=.|+.+.+.+..+++.+..+.-+..-+|
T Consensus 73 ~~l~~Lg~s~~dl~~~~~lGi~glRLD~Gf~-~~----eia~ls~n-lkIeLNASti~~~~l~~l~~~~~n~~~l~a~HN 146 (372)
T 2p0o_A 73 EALKRAGFSFDELEPLIELGVTGLRMDYGIT-IE----QMAHASHK-IDIGLNASTITLEEVAELKAHQADFSRLEAWHN 146 (372)
T ss_dssp HHHHTTTCBTTBCHHHHHHTCCEEEECSSCC-HH----HHHHHHTT-SEEEEETTTCCHHHHHHHHHTTCCGGGEEEECC
T ss_pred HHHHHcCCCHHHHHHHHHcCCCEEEEcCCCC-HH----HHHHHhcC-CEEEEECccCCHHHHHHHHHcCCChHHeEEeec
Confidence 4567777777777666643 22222 12 22233333 333455667789999999998666665555566
Q ss_pred ccccCh-------hhHHHHHHHHhCCeEEEcccccccccCCcccCCCCCCCCCCCCCCCchhHHHHhhhhhcCCchHHHH
Q 022300 140 VVDMRP-------QQKMAELCQLTGVKLITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQV 212 (299)
Q Consensus 140 ~~~~~~-------~~~~~~~~~~~gi~v~~~~pl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (299)
..-+.. -.+--++.++.|+.+.|+.|-..+ +.|..... -
T Consensus 147 FYPr~~TGLs~~~f~~~n~~~k~~Gi~t~AFI~g~~~-~rGPl~eG------------L--------------------- 192 (372)
T 2p0o_A 147 YYPRPETGIGTTFFNEKNRWLKELGLQVFTFVPGDGQ-TRGPIFAG------------L--------------------- 192 (372)
T ss_dssp CCCSTTCSBCHHHHHHHHHHHHHTTCEEEEEECCSSS-CCTTTCSC------------C---------------------
T ss_pred cCCCCCCCCCHHHHHHHHHHHHHCCCcEEEEecCCCc-cCCCccCC------------C---------------------
Confidence 432221 123446677889999998776542 22211110 0
Q ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHhCCCCceeeeccCCCCHHHHHHhHh
Q 022300 213 LLQTLKRIASKHGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNA 262 (299)
Q Consensus 213 ~~~~l~~la~~~~~s~aq~al~~~l~~~~v~~~i~g~~~~~~e~l~enl~ 262 (299)
+.|.. ..+++| .++...+...+.|.-|++|-...+.+.|++..+
T Consensus 193 --PTLE~---HR~~~~-~~~a~~L~~~~~iD~V~IGd~~~S~~el~~l~~ 236 (372)
T 2p0o_A 193 --PTLEK---HRGQNP-FAAAVGLMADPYVDAVYIGDPTISERTMAQFGY 236 (372)
T ss_dssp --CSBGG---GTTSCH-HHHHHHHHHSTTCCEEEECSSCCCHHHHHHHHH
T ss_pred --CchHH---hCCCCH-HHHHHHHHhcCCCCEEEECCCCCCHHHHHHHHH
Confidence 11100 123444 456667888888999999987667777766655
No 97
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=32.13 E-value=68 Score=26.52 Aligned_cols=66 Identities=11% Similarity=0.046 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHHHc-CcccEEEecCCCHH--HHHHHHHcCCCeeEeeecccccccChhhHHHHHHHHhCCeEEEc
Q 022300 92 YLDALNHLTDLKEE-GKIKTVALTNFDTE--RLRIILENGIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITY 163 (299)
Q Consensus 92 ~~~~~~~L~~l~~~-Gkir~iGvs~~~~~--~l~~~~~~~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~~~ 163 (299)
..+++.+|..+++. ++|.-+|+.+.... .+..++ +. ++.+..|+- .+.-...+..+++.|+.++.-
T Consensus 92 ~~Dil~aL~~a~~~~~kIavVg~~~~~~~~~~i~~ll--~~--~i~~~~~~~--~ee~~~~i~~l~~~G~~vVVG 160 (225)
T 2pju_A 92 GYDVLQFLAKAGKLTSSIGVVTYQETIPALVAFQKTF--NL--RLDQRSYIT--EEDARGQINELKANGTEAVVG 160 (225)
T ss_dssp HHHHHHHHHHTTCTTSCEEEEEESSCCHHHHHHHHHH--TC--CEEEEEESS--HHHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHHHhhCCcEEEEeCchhhhHHHHHHHHh--CC--ceEEEEeCC--HHHHHHHHHHHHHCCCCEEEC
Confidence 46899999999987 66788888876553 334443 33 344444443 222346899999999998773
No 98
>3ec1_A YQEH GTPase; atnos1, atnoa1, trap, PVHL, hydrolase, signaling protein; HET: GDP; 2.36A {Geobacillus stearothermophilus}
Probab=31.96 E-value=2.6e+02 Score=24.52 Aligned_cols=83 Identities=11% Similarity=0.051 Sum_probs=58.0
Q ss_pred CCcEEEEecccCCCCCCCHHHHHHHHHHHHhhcCCCcccEEEEecCCCCCCcHHHHHHHHHHHHHcCcccEEEecCCCHH
Q 022300 40 QSSWISLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTE 119 (299)
Q Consensus 40 R~~i~I~tK~~~~~~~~~~~~i~~~ve~SL~~Lg~d~iDl~~lH~pd~~~~~~~~~~~~L~~l~~~Gkir~iGvs~~~~~ 119 (299)
+.-++|.+|.--.......+.+.+.+.+.++.+|....+++.+-. ... ..++++++.+.++.+...|--+|.+|-...
T Consensus 99 ~piilV~NK~DLl~~~~~~~~~~~~l~~~~~~~g~~~~~v~~iSA-~~g-~gi~~L~~~I~~~~~~~~i~~vG~~nvGKS 176 (369)
T 3ec1_A 99 NPILLVGNKADLLPRSVKYPKLLRWMRRMAEELGLCPVDVCLVSA-AKG-IGMAKVMEAINRYREGGDVYVVGCTNVGKS 176 (369)
T ss_dssp SCEEEEEECGGGSCTTCCHHHHHHHHHHHHHTTTCCCSEEEECBT-TTT-BTHHHHHHHHHHHHTTSCEEEECCTTSSHH
T ss_pred CCEEEEEEChhcCCCccCHHHHHHHHHHHHHHcCCCcccEEEEEC-CCC-CCHHHHHHHHHhhcccCcEEEEcCCCCchH
Confidence 456788899853223334677777777778888875456665542 222 337899999999888888999999998876
Q ss_pred HHHHH
Q 022300 120 RLRII 124 (299)
Q Consensus 120 ~l~~~ 124 (299)
.+...
T Consensus 177 tliN~ 181 (369)
T 3ec1_A 177 TFINR 181 (369)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 65443
No 99
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=31.78 E-value=2.1e+02 Score=23.23 Aligned_cols=22 Identities=14% Similarity=0.395 Sum_probs=14.6
Q ss_pred HHHHHHHHHhhcCCCcccEEEEe
Q 022300 61 VRESIDVSRRRMDVPCLDMLQFH 83 (299)
Q Consensus 61 i~~~ve~SL~~Lg~d~iDl~~lH 83 (299)
+.+.++. ++++|.+.|.+...+
T Consensus 24 ~~~~l~~-~~~~G~~~vEl~~~~ 45 (262)
T 3p6l_A 24 LTEALDK-TQELGLKYIEIYPGH 45 (262)
T ss_dssp HHHHHHH-HHHTTCCEEEECTTE
T ss_pred HHHHHHH-HHHcCCCEEeecCCc
Confidence 3344433 567999999988654
No 100
>1bxn_I Rubisco, protein (ribulose bisphosphate carboxylase small; lyase (carbon-carbon), lyase; 2.70A {Cupriavidus necator} SCOP: d.73.1.1
Probab=31.71 E-value=97 Score=23.61 Aligned_cols=64 Identities=8% Similarity=0.067 Sum_probs=43.7
Q ss_pred CCCCHHHHHHHHHHHHhh---cCCCcccE------EEE--ecCCCCCCcHHHHHHHHHHHHHc---CcccEEEecCCC
Q 022300 54 VKMTSSIVRESIDVSRRR---MDVPCLDM------LQF--HWWDYSNPGYLDALNHLTDLKEE---GKIKTVALTNFD 117 (299)
Q Consensus 54 ~~~~~~~i~~~ve~SL~~---Lg~d~iDl------~~l--H~pd~~~~~~~~~~~~L~~l~~~---Gkir~iGvs~~~ 117 (299)
.+++.+.|.++|+-.|++ .++++-|- |+- -.|.....+..+++..|++++++ ..||-||+.|..
T Consensus 12 P~ltdeqI~kQI~YlL~qGw~p~lE~~d~~~~r~~yW~mWkLPmF~~td~~~Vl~Ele~C~k~~p~~YVRliGfD~~~ 89 (139)
T 1bxn_I 12 PELTDEQITKQLEYCLNQGWAVGLEYTDDPHPRNTYWEMFGLPMFDLRDAAGILMEINNARNTFPNHYIRVTAFDSTH 89 (139)
T ss_dssp SCCCHHHHHHHHHHHHHHTCEEEEEEESCCCTTCCCCEESSSCBTTCCCHHHHHHHHHHHHHHCSSSEEEEEEECTTT
T ss_pred CCCCHHHHHHHHHHHHHCCCeEEEEeccCCccccCEEeecCCCCcCCCCHHHHHHHHHHHHHHCCCCeEEEEEEeCCC
Confidence 467889999999999887 44555442 111 11223333467999999999975 788999998643
No 101
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=31.70 E-value=2.5e+02 Score=24.15 Aligned_cols=100 Identities=11% Similarity=0.122 Sum_probs=61.3
Q ss_pred HHHHHHHHHHHHhhcCCCcccEEEEe-cCCCCCCc----HHHHHHHHHHHHHc-CcccEEEecCCCHHHHHHHHHcCCCe
Q 022300 58 SSIVRESIDVSRRRMDVPCLDMLQFH-WWDYSNPG----YLDALNHLTDLKEE-GKIKTVALTNFDTERLRIILENGIPV 131 (299)
Q Consensus 58 ~~~i~~~ve~SL~~Lg~d~iDl~~lH-~pd~~~~~----~~~~~~~L~~l~~~-Gkir~iGvs~~~~~~l~~~~~~~~~~ 131 (299)
.+.+.+..++.+ .-|.|.||+-.-- +|....-. ++.+...++.++++ +. -|.+-++.++.++++++.|..+
T Consensus 62 ~~~a~~~a~~~v-~~GAdiIDIGgeStrPga~~v~~~eE~~RvvpvI~~l~~~~~v--piSIDT~~~~V~~aAl~aGa~i 138 (297)
T 1tx2_A 62 VDAAVRHAKEMR-DEGAHIIDIGGESTRPGFAKVSVEEEIKRVVPMIQAVSKEVKL--PISIDTYKAEVAKQAIEAGAHI 138 (297)
T ss_dssp HHHHHHHHHHHH-HTTCSEEEEESCC----CCCCCHHHHHHHHHHHHHHHHHHSCS--CEEEECSCHHHHHHHHHHTCCE
T ss_pred HHHHHHHHHHHH-HcCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhcCCc--eEEEeCCCHHHHHHHHHcCCCE
Confidence 455555554444 5789999988643 34322111 23345555666654 33 3778899999999999985433
Q ss_pred eEeeecccccccChhhHHHHHHHHhCCeEEEccc
Q 022300 132 VSNQVQHSVVDMRPQQKMAELCQLTGVKLITYGT 165 (299)
Q Consensus 132 ~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~~~~p 165 (299)
. +..|.... +.++++.+++.|..++.+.-
T Consensus 139 I---Ndvsg~~~--d~~m~~~aa~~g~~vVlmh~ 167 (297)
T 1tx2_A 139 I---NDIWGAKA--EPKIAEVAAHYDVPIILMHN 167 (297)
T ss_dssp E---EETTTTSS--CTHHHHHHHHHTCCEEEECC
T ss_pred E---EECCCCCC--CHHHHHHHHHhCCcEEEEeC
Confidence 3 22333222 34789999999999998743
No 102
>2dqw_A Dihydropteroate synthase; dimer, structural genomics; 1.65A {Thermus thermophilus} PDB: 2dza_A* 2dzb_A*
Probab=31.49 E-value=2e+02 Score=24.79 Aligned_cols=98 Identities=14% Similarity=0.039 Sum_probs=62.0
Q ss_pred HHHHHHHHHHHHhhcCCCcccEEEEe-cCC----CCCCcHHHHHHHHHHHHHcCcccEEEecCCCHHHHHHHHHcCCCee
Q 022300 58 SSIVRESIDVSRRRMDVPCLDMLQFH-WWD----YSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILENGIPVV 132 (299)
Q Consensus 58 ~~~i~~~ve~SL~~Lg~d~iDl~~lH-~pd----~~~~~~~~~~~~L~~l~~~Gkir~iGvs~~~~~~l~~~~~~~~~~~ 132 (299)
.+.+.+..++ +-.-|.|.||+-.-- +|. .....++.+...++.+++++. -|.+-++.++.++++++.|..+.
T Consensus 51 ~~~a~~~a~~-~v~~GAdIIDIGgeSTrPga~~v~~~eE~~Rv~pvI~~l~~~~v--piSIDT~~~~Va~aAl~aGa~iI 127 (294)
T 2dqw_A 51 PERALERARE-MVAEGADILDLGAESTRPGAAPVPVEEEKRRLLPVLEAVLSLGV--PVSVDTRKPEVAEEALKLGAHLL 127 (294)
T ss_dssp --CCHHHHHH-HHHHTCSEEEEECC-----------CCHHHHHHHHHHHHHTTCS--CEEEECSCHHHHHHHHHHTCSEE
T ss_pred HHHHHHHHHH-HHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhCCC--eEEEECCCHHHHHHHHHhCCCEE
Confidence 3444443332 334589999998733 332 112226678888888887632 47888999999999999864422
Q ss_pred EeeecccccccChhhHHHHHHHHhCCeEEEcc
Q 022300 133 SNQVQHSVVDMRPQQKMAELCQLTGVKLITYG 164 (299)
Q Consensus 133 ~~q~~~n~~~~~~~~~~~~~~~~~gi~v~~~~ 164 (299)
+..|.. ...++++.+++.|+.++.+.
T Consensus 128 ---NdVsg~---~d~~m~~v~a~~~~~vVlmh 153 (294)
T 2dqw_A 128 ---NDVTGL---RDERMVALAARHGVAAVVMH 153 (294)
T ss_dssp ---ECSSCS---CCHHHHHHHHHHTCEEEEEC
T ss_pred ---EECCCC---CChHHHHHHHHhCCCEEEEc
Confidence 222222 23478999999999999974
No 103
>2poz_A Putative dehydratase; octamer, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics, nysgxrc; 2.04A {Mesorhizobium loti}
Probab=31.46 E-value=2.7e+02 Score=24.55 Aligned_cols=111 Identities=8% Similarity=-0.088 Sum_probs=65.3
Q ss_pred CcEEEEecccCCCCCCCHHHHHHHHHHHHhhcCCCcccEEEEecCCCCCCcHHHHHHHHHHHHHcCcccEEEec-CCCHH
Q 022300 41 SSWISLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALT-NFDTE 119 (299)
Q Consensus 41 ~~i~I~tK~~~~~~~~~~~~i~~~ve~SL~~Lg~d~iDl~~lH~pd~~~~~~~~~~~~L~~l~~~Gkir~iGvs-~~~~~ 119 (299)
.++-|..... ..++.+...+-++. |+.+ ++.++..|-.. +-++.+.++++.-.|.=.+-- -++.+
T Consensus 198 ~d~~l~vD~n---~~~~~~~a~~~~~~-l~~~-----~i~~iE~P~~~-----~~~~~~~~l~~~~~ipIa~dE~~~~~~ 263 (392)
T 2poz_A 198 PEIELMVDLS---GGLTTDETIRFCRK-IGEL-----DICFVEEPCDP-----FDNGALKVISEQIPLPIAVGERVYTRF 263 (392)
T ss_dssp TTSEEEEECT---TCSCHHHHHHHHHH-HGGG-----CEEEEECCSCT-----TCHHHHHHHHHHCSSCEEECTTCCHHH
T ss_pred CCCEEEEECC---CCCCHHHHHHHHHH-HHhc-----CCCEEECCCCc-----ccHHHHHHHHhhCCCCEEecCCcCCHH
Confidence 3455554442 24566665555444 5554 34455555322 225566677766555544433 34567
Q ss_pred HHHHHHHcCCCeeEeeeccccccc-ChhhHHHHHHHHhCCeEEEcccc
Q 022300 120 RLRIILENGIPVVSNQVQHSVVDM-RPQQKMAELCQLTGVKLITYGTV 166 (299)
Q Consensus 120 ~l~~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~~~gi~v~~~~pl 166 (299)
.++++++. ...+++|+-.+-.-. ..-..+.+.|+++|+.++.....
T Consensus 264 ~~~~~i~~-~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~h~~~ 310 (392)
T 2poz_A 264 GFRKIFEL-QACGIIQPDIGTAGGLMETKKICAMAEAYNMRVAPHVCG 310 (392)
T ss_dssp HHHHHHTT-TCCSEECCCTTTSSCHHHHHHHHHHHHTTTCEECCCCCS
T ss_pred HHHHHHHc-CCCCEEecCccccCCHHHHHHHHHHHHHcCCeEecCCCC
Confidence 78887765 347778877664321 22347899999999999887654
No 104
>3ks6_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Agrobacterium tumefaciens str} PDB: 3ks5_A*
Probab=31.23 E-value=90 Score=25.86 Aligned_cols=18 Identities=11% Similarity=0.220 Sum_probs=15.4
Q ss_pred hHHHHHHHHhCCeEEEcc
Q 022300 147 QKMAELCQLTGVKLITYG 164 (299)
Q Consensus 147 ~~~~~~~~~~gi~v~~~~ 164 (299)
.++++.++++|+.|.+|.
T Consensus 194 ~~~v~~~~~~G~~V~~WT 211 (250)
T 3ks6_A 194 AGLMAQVQAAGLDFGCWA 211 (250)
T ss_dssp HHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHCCCEEEEEe
Confidence 468899999999999984
No 105
>2vp8_A Dihydropteroate synthase 2; RV1207 transferase, folate biosynthesis, antibiotic resistance; 2.64A {Mycobacterium tuberculosis}
Probab=31.22 E-value=1.2e+02 Score=26.60 Aligned_cols=100 Identities=8% Similarity=0.036 Sum_probs=59.7
Q ss_pred CHHHHHHHHHHHHhhcCCCcccEEEEe-cCCCCCC---cHHHHHHHHHHHHHcC-cccEEEecCCCHHHHHHHHHcCCCe
Q 022300 57 TSSIVRESIDVSRRRMDVPCLDMLQFH-WWDYSNP---GYLDALNHLTDLKEEG-KIKTVALTNFDTERLRIILENGIPV 131 (299)
Q Consensus 57 ~~~~i~~~ve~SL~~Lg~d~iDl~~lH-~pd~~~~---~~~~~~~~L~~l~~~G-kir~iGvs~~~~~~l~~~~~~~~~~ 131 (299)
+.+.+.+..++ +-.-|.|.||+-.-- +|....+ .++.+...++.++++- . .-|.|-++.++.++++++.|..+
T Consensus 63 ~~~~a~~~A~~-~v~~GAdIIDIGgeSTrPG~~v~~~eEl~Rv~pvI~~l~~~~~~-vpISIDT~~~~VaeaAl~aGa~i 140 (318)
T 2vp8_A 63 SDAAARDAVHR-AVADGADVIDVGGVKAGPGERVDVDTEITRLVPFIEWLRGAYPD-QLISVDTWRAQVAKAACAAGADL 140 (318)
T ss_dssp -CHHHHHHHHH-HHHTTCSEEEEC----------CHHHHHHHHHHHHHHHHHHSTT-CEEEEECSCHHHHHHHHHHTCCE
T ss_pred CHHHHHHHHHH-HHHCCCCEEEECCCcCCCCCCCCHHHHHHHHHHHHHHHHhhCCC-CeEEEeCCCHHHHHHHHHhCCCE
Confidence 44555555543 444689999998643 3431122 1234555667777651 1 24788899999999999986442
Q ss_pred eEeeecccccccChhhHHHHHHHHhCCeEEEcc
Q 022300 132 VSNQVQHSVVDMRPQQKMAELCQLTGVKLITYG 164 (299)
Q Consensus 132 ~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~~~~ 164 (299)
. +..+.+. +.++++.+++.|+.++.+.
T Consensus 141 I---NDVsg~~---d~~m~~vaa~~g~~vVlmh 167 (318)
T 2vp8_A 141 I---NDTWGGV---DPAMPEVAAEFGAGLVCAH 167 (318)
T ss_dssp E---EETTSSS---STTHHHHHHHHTCEEEEEC
T ss_pred E---EECCCCC---chHHHHHHHHhCCCEEEEC
Confidence 2 2222221 3478999999999999974
No 106
>3uj2_A Enolase 1; enzyme function initiative, EFI, lyase; 2.00A {Anaerostipes caccae}
Probab=31.07 E-value=3.1e+02 Score=25.07 Aligned_cols=96 Identities=15% Similarity=0.091 Sum_probs=62.2
Q ss_pred CCHHHHHHHHHHHHhhcCCCcccEEEEecCCCCCCcHHHHHHHHHHHHHc-C-cccEEEecCC--CHHHHHHHHHcCCCe
Q 022300 56 MTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEE-G-KIKTVALTNF--DTERLRIILENGIPV 131 (299)
Q Consensus 56 ~~~~~i~~~ve~SL~~Lg~d~iDl~~lH~pd~~~~~~~~~~~~L~~l~~~-G-kir~iGvs~~--~~~~l~~~~~~~~~~ 131 (299)
.+++.+.+.+++.|+.+ +++++-.|-...+ |+.+.+|.+. | .|--.|=-.+ +++.++++++. -..
T Consensus 289 ~t~~eai~~~~~lle~y-----~i~~IEdPl~~dD-----~eg~~~L~~~~~~~ipI~gDE~~~tn~~~~~~~i~~-~a~ 357 (449)
T 3uj2_A 289 FASEELVAHWKSLCERY-----PIVSIEDGLDEED-----WEGWQYMTRELGDKIQLVGDDLFVTNTERLNKGIKE-RCG 357 (449)
T ss_dssp EEHHHHHHHHHHHHHHS-----CEEEEESCSCTTC-----HHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHT-TCC
T ss_pred cCHHHHHHHHHHHHHhc-----CceEEECCCCcch-----HHHHHHHHHHhCCCceEECCcceeCCHHHHHHHHHc-CCC
Confidence 36677776666666654 5888888755444 3455555554 3 4544453333 59999999886 347
Q ss_pred eEeeeccccccc-ChhhHHHHHHHHhCCeEEE
Q 022300 132 VSNQVQHSVVDM-RPQQKMAELCQLTGVKLIT 162 (299)
Q Consensus 132 ~~~q~~~n~~~~-~~~~~~~~~~~~~gi~v~~ 162 (299)
+++|+-.|-.-. ..-.++.+.|+++|+.++.
T Consensus 358 d~i~iKv~~iGGiTea~kia~lA~~~Gi~~~v 389 (449)
T 3uj2_A 358 NSILIKLNQIGTVSETLEAIKMAHKAGYTAVV 389 (449)
T ss_dssp SEEEECHHHHCSHHHHHHHHHHHHHTTCEEEE
T ss_pred CEEEECccccCCHHHHHHHHHHHHHcCCeEEE
Confidence 777877764321 2235789999999999544
No 107
>1r0m_A N-acylamino acid racemase; isomerase; 1.30A {Deinococcus radiodurans} SCOP: c.1.11.2 d.54.1.1 PDB: 1xpy_A* 1xs2_A 2ggj_A 2ggi_A 2ggh_A* 2ggg_A* 2fkp_A
Probab=30.90 E-value=65 Score=28.53 Aligned_cols=71 Identities=11% Similarity=0.022 Sum_probs=45.4
Q ss_pred HHHHHHHHHcCccc-EEEecCCCHHHHHHHHHcCCCeeEeeeccccccc-ChhhHHHHHHHHhCCeEEEccccc
Q 022300 96 LNHLTDLKEEGKIK-TVALTNFDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAELCQLTGVKLITYGTVM 167 (299)
Q Consensus 96 ~~~L~~l~~~Gkir-~iGvs~~~~~~l~~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~~~gi~v~~~~pl~ 167 (299)
++.+.++++.-.|. ..|=+-++.++++.+++. ...+++|+-.+-.-. ..-..+.+.|+++|+.++...-+.
T Consensus 228 ~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~-~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~~e 300 (375)
T 1r0m_A 228 LVDHAELARRIRTPLCLDESVASASDARKALAL-GAGGVINLKVARVGGHAESRRVHDVAQSFGAPVWCGGMLE 300 (375)
T ss_dssp SHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHH-TSCSEEEECTTTTTSHHHHHHHHHHHHHTTCCEEECCCCC
T ss_pred HHHHHHHHHhCCCCEEecCccCCHHHHHHHHHh-CCCCEEEECcchhcCHHHHHHHHHHHHHcCCcEEecCccc
Confidence 45566666654443 333445678889888876 357888887765321 123568999999999965544333
No 108
>1sjd_A N-acylamino acid racemase; lyase, isomerase; HET: NPG; 1.87A {Amycolatopsis SP} SCOP: c.1.11.2 d.54.1.1 PDB: 1sja_A* 1sjb_A* 1sjc_A*
Probab=30.89 E-value=2.4e+02 Score=24.65 Aligned_cols=101 Identities=7% Similarity=-0.009 Sum_probs=59.9
Q ss_pred CCCHHHHHHHHHHHHhhcCCCcccEEEEecCCCCCCcHHHHHHHHHHHHHcCcccE-EEecCCCHHHHHHHHHcCCCeeE
Q 022300 55 KMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKT-VALTNFDTERLRIILENGIPVVS 133 (299)
Q Consensus 55 ~~~~~~i~~~ve~SL~~Lg~d~iDl~~lH~pd~~~~~~~~~~~~L~~l~~~Gkir~-iGvs~~~~~~l~~~~~~~~~~~~ 133 (299)
.++.+. .+-++. |+.++++ ++..|-.. +-++.+.++++.-.|.= .|=+-++.+.++++++. ...++
T Consensus 193 ~~~~~~-~~~~~~-l~~~~i~-----~iE~P~~~-----~~~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~-~~~d~ 259 (368)
T 1sjd_A 193 AYTLGD-APQLAR-LDPFGLL-----LIEQPLEE-----EDVLGHAELARRIQTPICLDESIVSARAAADAIKL-GAVQI 259 (368)
T ss_dssp CCCGGG-HHHHHT-TGGGCCS-----EEECCSCT-----TCHHHHHHHHTTCSSCEEESTTCCSHHHHHHHHHT-TCCSE
T ss_pred CCCHHH-HHHHHH-HHhcCCC-----eEeCCCCh-----hhHHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHc-CCCCE
Confidence 345555 444333 6666554 34454322 23566777777644433 33345678889888876 35778
Q ss_pred eeeccccccc-ChhhHHHHHHHHhCCeEEEcccccc
Q 022300 134 NQVQHSVVDM-RPQQKMAELCQLTGVKLITYGTVMG 168 (299)
Q Consensus 134 ~q~~~n~~~~-~~~~~~~~~~~~~gi~v~~~~pl~~ 168 (299)
+|+..+-.-. ..-..+.+.|+++|+.++...-+..
T Consensus 260 v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~~es 295 (368)
T 1sjd_A 260 VNIKPGRVGGYLEARRVHDVCAAHGIPVWCGGMIET 295 (368)
T ss_dssp EEECTTTTTSHHHHHHHHHHHHHTTCCEEECCCCCC
T ss_pred EEecccccCCHHHHHHHHHHHHHcCCcEEeCCcccc
Confidence 8887765321 1235689999999999655443433
No 109
>1bwv_S Rubisco, protein (ribulose bisphosphate carboxylase); carbon dioxide fixation, complex (rubisco-reaction intermedi high specificity factor; HET: KCX CAP; 2.40A {Galdieria partita} SCOP: d.73.1.1 PDB: 1iwa_B
Probab=30.86 E-value=1.1e+02 Score=23.38 Aligned_cols=64 Identities=11% Similarity=0.080 Sum_probs=43.4
Q ss_pred CCCCHHHHHHHHHHHHhh---cCCCcccE------EEE--ecCCCCCCcHHHHHHHHHHHHHc---CcccEEEecCCC
Q 022300 54 VKMTSSIVRESIDVSRRR---MDVPCLDM------LQF--HWWDYSNPGYLDALNHLTDLKEE---GKIKTVALTNFD 117 (299)
Q Consensus 54 ~~~~~~~i~~~ve~SL~~---Lg~d~iDl------~~l--H~pd~~~~~~~~~~~~L~~l~~~---Gkir~iGvs~~~ 117 (299)
.+++.+.|.++|+-.|++ .++++-|- |+- -.|.....+..+++..|++++++ ..||-||+.|..
T Consensus 12 P~ltdeqI~kQI~Yll~qGw~p~iEf~d~~~~r~~yW~mWkLPmF~~td~~~Vl~Ele~C~k~~p~~YVRliGfD~~~ 89 (138)
T 1bwv_S 12 PDLTDEQIKKQIDYMISKKLAIGIEYTNDIHPRNAYWEIWGLPLFDVTDPAAVLFEINACRKARSNFYIKVVGFSSVR 89 (138)
T ss_dssp CCCCHHHHHHHHHHHHHTTCEEEEEEESCCCTTCCCCEECSSCBCSCCCHHHHHHHHHHHHHHCTTSEEEEEEEECCT
T ss_pred CCCCHHHHHHHHHHHHHCCCeeeEEecCCCCCccCEEeccCCCCcCCCCHHHHHHHHHHHHHHCCCCeEEEEEEeCCC
Confidence 467889999999998887 34444442 111 11233333467999999999975 789999998754
No 110
>1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A
Probab=30.33 E-value=2.7e+02 Score=24.21 Aligned_cols=105 Identities=10% Similarity=0.047 Sum_probs=58.8
Q ss_pred CCCHHHHHHHHHHHHhhcCCCcccEEEEecCCCCCCcHHHHHHHHHHHHHcCcccE-EEecCCCHHHHHHHHHcCCCeeE
Q 022300 55 KMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKT-VALTNFDTERLRIILENGIPVVS 133 (299)
Q Consensus 55 ~~~~~~i~~~ve~SL~~Lg~d~iDl~~lH~pd~~~~~~~~~~~~L~~l~~~Gkir~-iGvs~~~~~~l~~~~~~~~~~~~ 133 (299)
.++.+...+-++. |+..+ .++.++..|-.. +-++.+.++++.-.|.= .|=+-++.+.+.++++. ...++
T Consensus 195 ~~~~~~a~~~~~~-l~~~~---~~i~~iEqP~~~-----~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~-~~~d~ 264 (366)
T 1tkk_A 195 GWRPKEAVTAIRK-MEDAG---LGIELVEQPVHK-----DDLAGLKKVTDATDTPIMADESVFTPRQAFEVLQT-RSADL 264 (366)
T ss_dssp CSCHHHHHHHHHH-HHHTT---CCEEEEECCSCT-----TCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHH-TCCSE
T ss_pred CCCHHHHHHHHHH-HhhcC---CCceEEECCCCc-----ccHHHHHHHHhhCCCCEEEcCCCCCHHHHHHHHHh-CCCCE
Confidence 3455555544443 55411 244455555322 12455566665544432 23344577777777765 34667
Q ss_pred eeecccccc-cChhhHHHHHHHHhCCeEEEccccccc
Q 022300 134 NQVQHSVVD-MRPQQKMAELCQLTGVKLITYGTVMGG 169 (299)
Q Consensus 134 ~q~~~n~~~-~~~~~~~~~~~~~~gi~v~~~~pl~~G 169 (299)
+|+-.+-.- -..-..+.+.|+++|+.++..+.+..+
T Consensus 265 v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~~es~ 301 (366)
T 1tkk_A 265 INIKLMKAGGISGAEKINAMAEACGVECMVGSMIETK 301 (366)
T ss_dssp EEECHHHHTSHHHHHHHHHHHHHHTCCEEECCSSCCH
T ss_pred EEeehhhhcCHHHHHHHHHHHHHcCCcEEecCccccH
Confidence 777665421 112346899999999999887665443
No 111
>1rbl_M Ribulose 1,5 bisphosphate carboxylase/oxygenase ( chain); lyase(carbon-carbon), lyase; HET: CAP; 2.20A {Synechococcus elongatus} SCOP: d.73.1.1 PDB: 1rsc_M*
Probab=30.25 E-value=1.1e+02 Score=22.35 Aligned_cols=64 Identities=8% Similarity=0.115 Sum_probs=42.6
Q ss_pred CCCCHHHHHHHHHHHHhh---cCCCccc-----EEEEe---cCCCCCCcHHHHHHHHHHHHHc---CcccEEEecCCC
Q 022300 54 VKMTSSIVRESIDVSRRR---MDVPCLD-----MLQFH---WWDYSNPGYLDALNHLTDLKEE---GKIKTVALTNFD 117 (299)
Q Consensus 54 ~~~~~~~i~~~ve~SL~~---Lg~d~iD-----l~~lH---~pd~~~~~~~~~~~~L~~l~~~---Gkir~iGvs~~~ 117 (299)
.+++.+.|.++|+-.|++ .++++-| --+.- .|.....+..+++.++++++++ ..||-||+.|..
T Consensus 18 P~lt~eqI~kQI~Yll~qGw~p~lEf~d~~~~~~~yW~mwklPmf~~~d~~~Vl~Ele~C~k~~p~~yVRligfD~~~ 95 (109)
T 1rbl_M 18 PPLSDRQIAAQIEYMIEQGFHPLIEFNEHSNPEEFYWTMWKLPLFACAAPQQVLDEVRECRSEYGDCYIRVAGFDNIK 95 (109)
T ss_dssp SCCCHHHHHHHHHHHHHHTCEEEEEEESCCCTTCCCCEECSSCCTTCCCHHHHHHHHHHHHHHCTTSEEEEEEEETTT
T ss_pred CCCCHHHHHHHHHHHHHCCCEEEEEeccCccccccEEeecccCCcCCCCHHHHHHHHHHHHHHCCCCeEEEEEEeCCC
Confidence 367889999999998887 2333322 11111 2233333467999999999975 789999998754
No 112
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=29.93 E-value=1.4e+02 Score=24.61 Aligned_cols=61 Identities=8% Similarity=0.163 Sum_probs=40.6
Q ss_pred HHHHHHHHHHHcCcccEEEecCC-CHHHHHHHHHcCCCeeEeeecccccccChhhHHHHHHHHhCC------eEEE
Q 022300 94 DALNHLTDLKEEGKIKTVALTNF-DTERLRIILENGIPVVSNQVQHSVVDMRPQQKMAELCQLTGV------KLIT 162 (299)
Q Consensus 94 ~~~~~L~~l~~~Gkir~iGvs~~-~~~~l~~~~~~~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi------~v~~ 162 (299)
..++.++.++++=----||..+. +.++++.+++.|-.|.+. +....+++++|+++|+ .+++
T Consensus 50 ~a~~~I~~l~~~~p~~~IGAGTVlt~~~a~~ai~AGA~fivs--------P~~~~evi~~~~~~~v~~~~~~~~~P 117 (217)
T 3lab_A 50 AGLAAISAIKKAVPEAIVGAGTVCTADDFQKAIDAGAQFIVS--------PGLTPELIEKAKQVKLDGQWQGVFLP 117 (217)
T ss_dssp THHHHHHHHHHHCTTSEEEEECCCSHHHHHHHHHHTCSEEEE--------SSCCHHHHHHHHHHHHHCSCCCEEEE
T ss_pred cHHHHHHHHHHHCCCCeEeeccccCHHHHHHHHHcCCCEEEe--------CCCcHHHHHHHHHcCCCccCCCeEeC
Confidence 34455555555411146777644 789999999988777653 2234579999999998 6665
No 113
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=29.77 E-value=2.2e+02 Score=25.14 Aligned_cols=73 Identities=8% Similarity=0.133 Sum_probs=46.6
Q ss_pred HHHHHHHHHcCcc-cEEEecCCCHHHHHHHHHcCCCeeEeeecccccc-cChhhHHHHHHHHhCCeEEEccccccc
Q 022300 96 LNHLTDLKEEGKI-KTVALTNFDTERLRIILENGIPVVSNQVQHSVVD-MRPQQKMAELCQLTGVKLITYGTVMGG 169 (299)
Q Consensus 96 ~~~L~~l~~~Gki-r~iGvs~~~~~~l~~~~~~~~~~~~~q~~~n~~~-~~~~~~~~~~~~~~gi~v~~~~pl~~G 169 (299)
++.+.++++.-.| -..|=+-++.++++.+++. ..++++|+..+-.- -..-..+...|+++|+.++..+.+..+
T Consensus 234 ~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~-~~~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~~~~~es~ 308 (383)
T 3i4k_A 234 LETLREITRRTNVSVMADESVWTPAEALAVVKA-QAADVIALKTTKHGGLLESKKIAAIAEAGGLACHGATSLEGP 308 (383)
T ss_dssp HHHHHHHHHHHCCEEEESTTCSSHHHHHHHHHH-TCCSEEEECTTTTTSHHHHHHHHHHHHHTTCEEEECCSCCCH
T ss_pred HHHHHHHHhhCCCCEEecCccCCHHHHHHHHHc-CCCCEEEEcccccCCHHHHHHHHHHHHHcCCeEEeCCCCccH
Confidence 4455566654333 3344455678888888775 34777787766432 122346889999999999876655544
No 114
>2v5j_A 2,4-dihydroxyhept-2-ENE-1,7-dioic acid aldolase; lyase, class II aldolase, homoprotocatechuate, aromatic DEGR aromatic hydrocarbons catabolism; 1.60A {Escherichia coli} PDB: 2v5k_A
Probab=28.85 E-value=2.7e+02 Score=23.66 Aligned_cols=67 Identities=6% Similarity=-0.022 Sum_probs=41.2
Q ss_pred HHHHHHHcCcc-cEEEecCCCHHHHHHHHHcCCCeeEeeecccccccChhhHHHHHHHHhCCeEEEcc
Q 022300 98 HLTDLKEEGKI-KTVALTNFDTERLRIILENGIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYG 164 (299)
Q Consensus 98 ~L~~l~~~Gki-r~iGvs~~~~~~l~~~~~~~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~~~~ 164 (299)
.|.+..++|+. -.+=+..-+++.++++...+..+.++-.+..+.++..-...+..+...|..++.+.
T Consensus 29 ~~k~~l~~G~~~~gl~~~~~~p~~~e~a~~~GaD~v~lDlEh~~~~~~~~~~~l~a~~~~~~~~~VRv 96 (287)
T 2v5j_A 29 SFKAALKAGRPQIGLWLGLSSSYSAELLAGAGFDWLLIDGEHAPNNVQTVLTQLQAIAPYPSQPVVRP 96 (287)
T ss_dssp HHHHHHHTTCCEEEEEECSCCHHHHHHHHTSCCSEEEEESSSSSCCHHHHHHHHHHHTTSSSEEEEEC
T ss_pred HHHHHHHCCCcEEEEEEECCCHHHHHHHHhCCCCEEEEeCCCccchHHHHHHHHHHHHhcCCCEEEEE
Confidence 35566678873 23334455788888887778888888888887554333334444444456566653
No 115
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=28.77 E-value=2.3e+02 Score=22.97 Aligned_cols=88 Identities=10% Similarity=0.087 Sum_probs=42.6
Q ss_pred HhhcCCCcccEEEEecCCCCCCcHHHHHHHHHH-HHHcCcccEEEecC---CCHHHHHHHHHc----CCCeeEeeecccc
Q 022300 69 RRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTD-LKEEGKIKTVALTN---FDTERLRIILEN----GIPVVSNQVQHSV 140 (299)
Q Consensus 69 L~~Lg~d~iDl~~lH~pd~~~~~~~~~~~~L~~-l~~~Gkir~iGvs~---~~~~~l~~~~~~----~~~~~~~q~~~n~ 140 (299)
++++|.+.|.+...|.+. ... .+.++.+.+ +.+.|. .-.+++. -..+.+++.++. |.+..++...
T Consensus 39 ~~~~G~~~vEl~~~~~~~-~~~--~~~~~~~~~~l~~~gl-~i~~~~~~~~~~~~~~~~~i~~A~~lGa~~v~~~p~--- 111 (257)
T 3lmz_A 39 LERLDIHYLCIKDFHLPL-NST--DEQIRAFHDKCAAHKV-TGYAVGPIYMKSEEEIDRAFDYAKRVGVKLIVGVPN--- 111 (257)
T ss_dssp HHHTTCCEEEECTTTSCT-TCC--HHHHHHHHHHHHHTTC-EEEEEEEEEECSHHHHHHHHHHHHHHTCSEEEEEEC---
T ss_pred HHHhCCCEEEEecccCCC-CCC--HHHHHHHHHHHHHcCC-eEEEEeccccCCHHHHHHHHHHHHHhCCCEEEecCC---
Confidence 566777777777655421 111 222333333 333443 3333322 234455444443 5554443211
Q ss_pred cccChhhHHHHHHHHhCCeEEEcccc
Q 022300 141 VDMRPQQKMAELCQLTGVKLITYGTV 166 (299)
Q Consensus 141 ~~~~~~~~~~~~~~~~gi~v~~~~pl 166 (299)
...-..+.+.|+++||.+. +-+.
T Consensus 112 --~~~l~~l~~~a~~~gv~l~-lEn~ 134 (257)
T 3lmz_A 112 --YELLPYVDKKVKEYDFHYA-IHLH 134 (257)
T ss_dssp --GGGHHHHHHHHHHHTCEEE-EECC
T ss_pred --HHHHHHHHHHHHHcCCEEE-EecC
Confidence 1223468888889998654 3455
No 116
>3qn3_A Enolase; structural genomics, center for structural genomics of infec diseases, csgid, glycolysis, lyase; 2.13A {Campylobacter jejuni}
Probab=28.52 E-value=3.3e+02 Score=24.58 Aligned_cols=96 Identities=15% Similarity=0.063 Sum_probs=61.8
Q ss_pred CCHHHHHHHHHHHHhhcCCCcccEEEEecCCCCCCcHHHHHHHHHHHHHc-C-cccEEE-ecCCC-HHHHHHHHHcCCCe
Q 022300 56 MTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEE-G-KIKTVA-LTNFD-TERLRIILENGIPV 131 (299)
Q Consensus 56 ~~~~~i~~~ve~SL~~Lg~d~iDl~~lH~pd~~~~~~~~~~~~L~~l~~~-G-kir~iG-vs~~~-~~~l~~~~~~~~~~ 131 (299)
++++...+.+++.++.. +++++-.|-...+ |+.+.+|.+. | +|-=.| =+.++ ++.++++++. -..
T Consensus 261 ~t~~eai~~~~~ll~~y-----~i~~IEdPl~~dD-----~e~~~~L~~~~g~~ipI~gDE~~~tn~~~~~~~i~~-~a~ 329 (417)
T 3qn3_A 261 FSSEALIERYVELCAKY-----PICSIEDGLAEND-----FEGWIKLTEKLGNKIQLVGDDLFVTNEDILREGIIK-KMA 329 (417)
T ss_dssp ECHHHHHHHHHHHHHHS-----CEEEEESSSCTTC-----HHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHH-TCC
T ss_pred cCHHHHHHHHHHHHhhc-----ceeEEecCCCccc-----HHHHHHHHHhhCCCCceecCCcccCCHHHHHHHHHh-CCC
Confidence 45777777776666654 5888888755444 3455555554 3 454333 23444 8899998876 346
Q ss_pred eEeeeccccccc-ChhhHHHHHHHHhCCeEEE
Q 022300 132 VSNQVQHSVVDM-RPQQKMAELCQLTGVKLIT 162 (299)
Q Consensus 132 ~~~q~~~n~~~~-~~~~~~~~~~~~~gi~v~~ 162 (299)
+++|+-.|-.-. ..-.++...|+++|+.++.
T Consensus 330 d~i~iKv~qiGGiTea~kia~lA~~~G~~v~v 361 (417)
T 3qn3_A 330 NAVLIKPNQIGTITQTMRTVRLAQRNNYKCVM 361 (417)
T ss_dssp SEEEECHHHHCSHHHHHHHHHHHHHTTCEEEE
T ss_pred CEEEecCCCCCCHHHHHHHHHHHHHcCCeEEE
Confidence 777777764321 2235689999999999875
No 117
>2vef_A Dihydropteroate synthase; antibiotic resistance, transferase, folate biosynthesis; 1.8A {Streptococcus pneumoniae} PDB: 2veg_A*
Probab=28.42 E-value=2.9e+02 Score=23.90 Aligned_cols=101 Identities=10% Similarity=0.057 Sum_probs=62.1
Q ss_pred CHHHHHHHHHHHHhhcCCCcccEEEEe-cCCCCC----CcHHHHHHHHHHHHHcCcccEEEecCCCHHHHHHHHHcCCCe
Q 022300 57 TSSIVRESIDVSRRRMDVPCLDMLQFH-WWDYSN----PGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILENGIPV 131 (299)
Q Consensus 57 ~~~~i~~~ve~SL~~Lg~d~iDl~~lH-~pd~~~----~~~~~~~~~L~~l~~~Gkir~iGvs~~~~~~l~~~~~~~~~~ 131 (299)
+.+.+.+..++ +-.-|.|.||+---- +|.... ..+..+...++.++++-. --|.|-++.++.++++++.|.++
T Consensus 31 ~~~~a~~~a~~-~v~~GAdIIDIGgeSTrPGa~~v~~~eE~~Rv~pvI~~l~~~~~-vpiSIDT~~~~Va~aAl~aGa~i 108 (314)
T 2vef_A 31 ALEQALQQARK-LIAEGASMLDIGGESTRPGSSYVEIEEEIQRVVPVIKAIRKESD-VLISIDTWKSQVAEAALAAGADL 108 (314)
T ss_dssp HHHHHHHHHHH-HHHTTCSEEEEECCC-----CHHHHHHHHHHHHHHHHHHHHHCC-CEEEEECSCHHHHHHHHHTTCCE
T ss_pred CHHHHHHHHHH-HHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhhCC-ceEEEeCCCHHHHHHHHHcCCCE
Confidence 34555444433 334689999987643 343210 114456777777776622 24788899999999999986433
Q ss_pred eEeeecccccccChhhHHHHHHHHhCCeEEEcc
Q 022300 132 VSNQVQHSVVDMRPQQKMAELCQLTGVKLITYG 164 (299)
Q Consensus 132 ~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~~~~ 164 (299)
. | ..|.+.. +.++++.+.+.|+.++.+.
T Consensus 109 I-N--DVsg~~~--d~~m~~v~a~~~~~vvlmh 136 (314)
T 2vef_A 109 V-N--DITGLMG--DEKMPHVVAEARAQVVIMF 136 (314)
T ss_dssp E-E--ETTTTCS--CTTHHHHHHHHTCEEEEEC
T ss_pred E-E--ECCCCCC--ChHHHHHHHHcCCCEEEEe
Confidence 2 2 2222222 2368999999999999874
No 118
>4h1z_A Enolase Q92ZS5; dehydratase, magnesium binding site, enzyme function initiat isomerase; 2.01A {Sinorhizobium meliloti} PDB: 2ppg_A
Probab=28.17 E-value=1.8e+02 Score=26.11 Aligned_cols=87 Identities=8% Similarity=0.003 Sum_probs=53.6
Q ss_pred ccEEEEecCCCCCCcHHHHHHHHHHHHHcCcc-cEEEecCCCHHHHHHHHHcCCCeeEeeecccccccChhhHHHHHHHH
Q 022300 77 LDMLQFHWWDYSNPGYLDALNHLTDLKEEGKI-KTVALTNFDTERLRIILENGIPVVSNQVQHSVVDMRPQQKMAELCQL 155 (299)
Q Consensus 77 iDl~~lH~pd~~~~~~~~~~~~L~~l~~~Gki-r~iGvs~~~~~~l~~~~~~~~~~~~~q~~~n~~~~~~~~~~~~~~~~ 155 (299)
.+++++-.|-...+ ++.+.+|++.-.+ -+.|=+-++...+..+++. -.++++|+...-.--..-..+...|+.
T Consensus 258 ~~l~~iEqP~~~~d-----~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~-~a~div~~d~~~GGit~~~kia~~A~~ 331 (412)
T 4h1z_A 258 HGLWFAEAPVRTED-----IDGLARVAASVSTAIAVGEEWRTVHDMVPRVAR-RALAIVQPEMGHKGITQFMRIGAYAHV 331 (412)
T ss_dssp GCEEEEECCSCTTC-----HHHHHHHHHHCSSEEEECTTCCSHHHHHHHHHT-TCCSEECCCHHHHHHHHHHHHHHHHHH
T ss_pred cccceecCCCCccc-----hHHHHHHHhhcCCccccCCcccchHhHHHHHHc-CCCCEEEecCCCCChHHHHHHHHHHHH
Confidence 34555555533222 4456666665433 3455567788888888776 346777766431000112468889999
Q ss_pred hCCeEEEccccccc
Q 022300 156 TGVKLITYGTVMGG 169 (299)
Q Consensus 156 ~gi~v~~~~pl~~G 169 (299)
+|+.++..+.+..|
T Consensus 332 ~gi~v~~h~~~~~~ 345 (412)
T 4h1z_A 332 HHIKVIPHATIGAG 345 (412)
T ss_dssp TTCEECCCCCSSCS
T ss_pred CCCcEEecCCcchH
Confidence 99999998777665
No 119
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=28.01 E-value=3.1e+02 Score=24.17 Aligned_cols=99 Identities=8% Similarity=-0.049 Sum_probs=61.0
Q ss_pred CCCHHHHHHHHHHHHhhcCCCcccEEEEecCCCCCCcHHHHHHHHHHHHHcCcccEEEe-cCCCHHHHHHHHHcCCCeeE
Q 022300 55 KMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVAL-TNFDTERLRIILENGIPVVS 133 (299)
Q Consensus 55 ~~~~~~i~~~ve~SL~~Lg~d~iDl~~lH~pd~~~~~~~~~~~~L~~l~~~Gkir~iGv-s~~~~~~l~~~~~~~~~~~~ 133 (299)
.++.+...+-++. |+.+++++| ..|-.. +-++.+.++++.-.|-=++- +-++.+.++++++. ...++
T Consensus 204 ~~~~~~a~~~~~~-l~~~~i~~i-----EqP~~~-----~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~-~~~d~ 271 (391)
T 2qgy_A 204 PEDLDQTKSFLKE-VSSFNPYWI-----EEPVDG-----ENISLLTEIKNTFNMKVVTGEKQSGLVHFRELISR-NAADI 271 (391)
T ss_dssp CSCHHHHHHHHHH-HGGGCCSEE-----ECSSCT-----TCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHT-TCCSE
T ss_pred CCCHHHHHHHHHH-HHhcCCCeE-----eCCCCh-----hhHHHHHHHHhhCCCCEEEcCCcCCHHHHHHHHHc-CCCCE
Confidence 4566666655554 666666543 344221 23556667776655543333 34577888888875 34777
Q ss_pred eeeccccccc-ChhhHHHHHHHHhCCeEEEccc
Q 022300 134 NQVQHSVVDM-RPQQKMAELCQLTGVKLITYGT 165 (299)
Q Consensus 134 ~q~~~n~~~~-~~~~~~~~~~~~~gi~v~~~~p 165 (299)
+|+-.+-.-. ..-..+...|+++|+.++..+.
T Consensus 272 v~ik~~~~GGit~~~~i~~~A~~~gi~~~~~~~ 304 (391)
T 2qgy_A 272 FNPDISGMGGLIDIIEISNEASNNGIFISPHCW 304 (391)
T ss_dssp ECCBTTTSSCHHHHHHHHHHHHHTTCEECCBCC
T ss_pred EEECcchhCCHHHHHHHHHHHHHCCCEEeccCC
Confidence 7877664321 1234689999999999988764
No 120
>3dg3_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding; 1.60A {Mycobacterium smegmatis} PDB: 3dg6_A* 3dg7_A*
Probab=27.96 E-value=1e+02 Score=27.17 Aligned_cols=72 Identities=6% Similarity=-0.012 Sum_probs=49.4
Q ss_pred HHHHHHHHHcCccc-EEEecCCCHHHHHHHHHcCCCeeEeeecccccccCh-hhHHHHHHHHhCCeEEEccccccc
Q 022300 96 LNHLTDLKEEGKIK-TVALTNFDTERLRIILENGIPVVSNQVQHSVVDMRP-QQKMAELCQLTGVKLITYGTVMGG 169 (299)
Q Consensus 96 ~~~L~~l~~~Gkir-~iGvs~~~~~~l~~~~~~~~~~~~~q~~~n~~~~~~-~~~~~~~~~~~gi~v~~~~pl~~G 169 (299)
++.+.++++.-.+. ..|=+-++.+.+..+++. ..++++|+..+-. .-. -..+...|+++|+.++..+.+.++
T Consensus 225 ~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~-~~~d~v~~k~~~~-Git~~~~ia~~A~~~gi~~~~~~~~es~ 298 (367)
T 3dg3_A 225 VLSRRRLVGQLDMPFIADESVPTPADVTREVLG-GSATAISIKTART-GFTGSTRVHHLAEGLGLDMVMGNQIDGQ 298 (367)
T ss_dssp HHHHHHHHHHCSSCEEECTTCSSHHHHHHHHHH-TSCSEEEECHHHH-TTHHHHHHHHHHHHHTCEEEECCSSCCH
T ss_pred HHHHHHHHHhCCCCEEecCCcCCHHHHHHHHHc-CCCCEEEeehhhh-hHHHHHHHHHHHHHcCCeEEECCcCCcH
Confidence 45667777765443 344456788888888876 3477788877654 222 246899999999999987655544
No 121
>3l12_A Putative glycerophosphoryl diester phosphodiester; struct genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.60A {Silicibacter pomeroyi}
Probab=27.96 E-value=1.5e+02 Score=25.35 Aligned_cols=27 Identities=15% Similarity=0.108 Sum_probs=19.4
Q ss_pred HHHHcCcccEEEecCCCHHHHHHHHHc
Q 022300 101 DLKEEGKIKTVALTNFDTERLRIILEN 127 (299)
Q Consensus 101 ~l~~~Gkir~iGvs~~~~~~l~~~~~~ 127 (299)
.+++.|....+=+++|+.+.+..+.+.
T Consensus 173 ~l~~~~~~~~v~i~SF~~~~l~~~~~~ 199 (313)
T 3l12_A 173 DVRRYRMEPRTVMHSFDWALLGECRRQ 199 (313)
T ss_dssp HHHHTTCGGGEEEEESCHHHHHHHHHH
T ss_pred HHHHcCCCCCEEEEcCCHHHHHHHHHH
Confidence 344457677788888888888877664
No 122
>4dwd_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, EFI, enzyme function initiative, metal protein; HET: MSE; 1.50A {Paracoccus denitrificans} PDB: 3n4e_A*
Probab=27.88 E-value=1.1e+02 Score=27.41 Aligned_cols=68 Identities=15% Similarity=0.224 Sum_probs=46.2
Q ss_pred HHHHHHHHHcCccc-EEEecCCCHHHHHHHHHcCCCeeEeeecccccc-cChhhHHHHHHHHhCCeEEEccc
Q 022300 96 LNHLTDLKEEGKIK-TVALTNFDTERLRIILENGIPVVSNQVQHSVVD-MRPQQKMAELCQLTGVKLITYGT 165 (299)
Q Consensus 96 ~~~L~~l~~~Gkir-~iGvs~~~~~~l~~~~~~~~~~~~~q~~~n~~~-~~~~~~~~~~~~~~gi~v~~~~p 165 (299)
++.+.++++.-.|. ..|=+-++.+.++.+++.+ ++++|+..+-.- -..-..+.+.|+++|+.++..+.
T Consensus 231 ~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~--~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~~ 300 (393)
T 4dwd_A 231 VGAMGEVAQRLDITVSAGEQTYTLQALKDLILSG--VRMVQPDIVKMGGITGMMQCAALAHAHGVEFVPHQT 300 (393)
T ss_dssp HHHHHHHHHHCSSEEEBCTTCCSHHHHHHHHHHT--CCEECCCTTTTTHHHHHHHHHHHHHHHTCEECCCCC
T ss_pred HHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcC--CCEEEeCccccCCHHHHHHHHHHHHHcCCEEeecCC
Confidence 45666666654443 3334456788888888765 888888776532 12234689999999999988766
No 123
>3ix3_A Transcriptional activator protein LASR; quorum sensing receptor, triphenyl mimics, DNA- binding, quorum sensing; HET: OHN; 1.40A {Pseudomonas aeruginosa} PDB: 3ix4_A* 3ix8_A* 3jpu_A* 2uv0_E*
Probab=27.88 E-value=1.2e+02 Score=23.24 Aligned_cols=82 Identities=7% Similarity=-0.030 Sum_probs=51.7
Q ss_pred CCHHHHHHHHHHHHhhcCCCcccEEEEecCCCCCCcHHHHHHHHHHHHHcCcccEEEecCCCHHHHHHHHHc--------
Q 022300 56 MTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-------- 127 (299)
Q Consensus 56 ~~~~~i~~~ve~SL~~Lg~d~iDl~~lH~pd~~~~~~~~~~~~L~~l~~~Gkir~iGvs~~~~~~l~~~~~~-------- 127 (299)
.+.+.+.+.+++..+.+|.+++=+..++.+.... -..+-++|++.+..+...+.
T Consensus 14 ~s~~~l~~~l~~~~~~~Gf~~~~y~~~~~~~~~~------------------~~~~~~~nyP~~W~~~Y~~~~y~~~DPv 75 (173)
T 3ix3_A 14 SGKLEWSAILQKMASDLGFSKILFGLLPKDSQDY------------------ENAFIVGNYPAAWREHYDRAGYARVDPT 75 (173)
T ss_dssp CHHHHHHHHHHHHHHHTTCSEEEEEEECTTCCCG------------------GGSEEEECSCHHHHHHHHHTTGGGTCHH
T ss_pred CCHHHHHHHHHHHHHHCCCCeEEEEeecCCCCcc------------------cceeEecCCCHHHHHHHHHCcCeecCch
Confidence 3678999999999999999998777766542111 12355778877776655543
Q ss_pred -------CCCeeEeeecccccccChhhHHHHHHHHhCC
Q 022300 128 -------GIPVVSNQVQHSVVDMRPQQKMAELCQLTGV 158 (299)
Q Consensus 128 -------~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi 158 (299)
..++...... ........+++.++++|+
T Consensus 76 v~~~~~~~~P~~W~~~~---~~~~~~~~~~~~a~~~Gl 110 (173)
T 3ix3_A 76 VSHCTQSVLPIFWEPSI---YQTRKQHEFFEEASAAGL 110 (173)
T ss_dssp HHHHHHCSSCEECCGGG---CCSHHHHHHHHHHHHTTC
T ss_pred hhhhccCCCCeEeCccc---ccChhHHHHHHHHHHcCC
Confidence 1222222211 112224579999999986
No 124
>2vvp_A Ribose-5-phosphate isomerase B; RPIB, RV2465C, RARE sugar, carbohydrate metabolism, pentose phosphate pathway; HET: R52 5RP; 1.65A {Mycobacterium tuberculosis} SCOP: c.121.1.1 PDB: 2vvo_A* 2vvq_A* 2bes_A* 2bet_A* 1usl_A
Probab=27.80 E-value=2.2e+02 Score=22.23 Aligned_cols=94 Identities=12% Similarity=0.002 Sum_probs=64.2
Q ss_pred HHHHHHHHHHHhhcCCCcccEEEEecCCCCCCcHHHHHHHHHHHHHcCcc-cEEEecCCCHHHHHHHHHc-CCCeeEeee
Q 022300 59 SIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKI-KTVALTNFDTERLRIILEN-GIPVVSNQV 136 (299)
Q Consensus 59 ~~i~~~ve~SL~~Lg~d~iDl~~lH~pd~~~~~~~~~~~~L~~l~~~Gki-r~iGvs~~~~~~l~~~~~~-~~~~~~~q~ 136 (299)
-.+++.+.+-|+..|-+.+|+-. +..+...+ +.+.-....+.+.+|.. +-|-++....-....+.+. |+....+.-
T Consensus 15 ~~lK~~i~~~L~~~G~eV~D~G~-~~~~~~~d-Ypd~a~~va~~V~~g~~d~GIliCGTGiG~siaANKv~GIRAAl~~d 92 (162)
T 2vvp_A 15 YELKQRIIEHLKQTGHEPIDCGA-LRYDADDD-YPAFCIAAATRTVADPGSLGIVLGGSGNGEQIAANKVPGARCALAWS 92 (162)
T ss_dssp HHHHHHHHHHHHHTTCEEEECSC-CSCCTTCC-HHHHHHHHHHHHHHSTTCEEEEEESSSHHHHHHHHTSTTCCEEECCS
T ss_pred HHHHHHHHHHHHHCCCEEEEeCC-CCCCCCCC-hHHHHHHHHHHHHcCCCceEEEEeCCcHHHHHHHhcCCCeEEEEeCC
Confidence 56788899999999999998853 33332334 78888888888899887 5577777777776677665 665554332
Q ss_pred cccccccChhhHHHHHHHHh-CCeEEEcc
Q 022300 137 QHSVVDMRPQQKMAELCQLT-GVKLITYG 164 (299)
Q Consensus 137 ~~n~~~~~~~~~~~~~~~~~-gi~v~~~~ 164 (299)
.| ....++++ |-.|+++.
T Consensus 93 ~~----------sA~~ar~hNnaNVL~lG 111 (162)
T 2vvp_A 93 VQ----------TAALAREHNNAQLIGIG 111 (162)
T ss_dssp HH----------HHHHHHHTTCCSEEEEE
T ss_pred HH----------HHHHHHHhCCCcEEEEc
Confidence 22 34556665 57777753
No 125
>3mel_A Thiamin pyrophosphokinase family protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium; HET: TPP; 2.79A {Enterococcus faecalis}
Probab=27.55 E-value=2.5e+02 Score=22.87 Aligned_cols=40 Identities=15% Similarity=0.111 Sum_probs=32.2
Q ss_pred CCHHHHHHHHHHhCCCC-ceeeeccCCCCHHHHHHhHhhhc
Q 022300 226 VSIPVVAVRYILDQPAV-AGSMIGVRLGLAEHIQDTNAIFM 265 (299)
Q Consensus 226 ~s~aq~al~~~l~~~~v-~~~i~g~~~~~~e~l~enl~a~~ 265 (299)
.|-.++||.++..++.- ..+++|+.-.+.+|.-.|+..+-
T Consensus 77 ~TD~e~Al~~~~~~~~~~~I~i~Ga~GgRlDH~lani~lL~ 117 (222)
T 3mel_A 77 DTDTQLALQEALQRFPQAEMTIIGATGGRIDHLLANLWLPF 117 (222)
T ss_dssp SCHHHHHHHHHHHHCTTSEEEEECCCSSCHHHHHHHHTGGG
T ss_pred CCHHHHHHHHHHHhCCCceEEEEccCCCCHHHHHHHHHHHH
Confidence 46678899999987764 66888998889999999997764
No 126
>2qq6_A Mandelate racemase/muconate lactonizing enzyme- like protein; enolase, Mg ION, PSI-2, NYSGXRC, structural genomics; 2.90A {Rubrobacter xylanophilus dsm 9941}
Probab=27.55 E-value=2.5e+02 Score=24.97 Aligned_cols=99 Identities=8% Similarity=0.044 Sum_probs=55.9
Q ss_pred CCHHHHHHHHHHHHhhcCCCcccEEEEecCCCCCCcHHHHHHHHHHHHHcCcccEEE-ecCCCHHHHHHHHHcCCCeeEe
Q 022300 56 MTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVA-LTNFDTERLRIILENGIPVVSN 134 (299)
Q Consensus 56 ~~~~~i~~~ve~SL~~Lg~d~iDl~~lH~pd~~~~~~~~~~~~L~~l~~~Gkir~iG-vs~~~~~~l~~~~~~~~~~~~~ 134 (299)
++.+...+-++. |+.++++ ++..|-.. +-++.+.++++.-.|-=.+ =+-++.+.++++++. ...+++
T Consensus 221 ~~~~~a~~~~~~-l~~~~i~-----~iEeP~~~-----~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~-~~~d~v 288 (410)
T 2qq6_A 221 FDIPSSIRFARA-MEPFGLL-----WLEEPTPP-----ENLDALAEVRRSTSTPICAGENVYTRFDFRELFAK-RAVDYV 288 (410)
T ss_dssp CCHHHHHHHHHH-HGGGCCS-----EEECCSCT-----TCHHHHHHHHTTCSSCEEECTTCCSHHHHHHHHHT-TCCSEE
T ss_pred CCHHHHHHHHHH-HhhcCCC-----eEECCCCh-----hhHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHc-CCCCEE
Confidence 455555544433 5555443 33343221 2255666666654444333 234467778877765 346777
Q ss_pred eecccccc-cChhhHHHHHHHHhCCeEEEcccc
Q 022300 135 QVQHSVVD-MRPQQKMAELCQLTGVKLITYGTV 166 (299)
Q Consensus 135 q~~~n~~~-~~~~~~~~~~~~~~gi~v~~~~pl 166 (299)
|+-.+-.- -..-..+...|+++|+.++.....
T Consensus 289 ~ik~~~~GGite~~~ia~~A~~~g~~~~~h~~~ 321 (410)
T 2qq6_A 289 MPDVAKCGGLAEAKRIANLAELDYIPFAPHNVS 321 (410)
T ss_dssp CCBHHHHTHHHHHHHHHHHHHTTTCCBCCBCCS
T ss_pred ecCccccCCHHHHHHHHHHHHHcCCeEeecCCC
Confidence 77655321 112346889999999998887653
No 127
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=27.47 E-value=50 Score=28.94 Aligned_cols=71 Identities=11% Similarity=0.077 Sum_probs=49.2
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHhCCCCceeeeccCCCCHHHHHHhHhhhc--------CC--CCHHHHHHHHHHHhcCC
Q 022300 215 QTLKRIASKHGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFM--------LS--LDEDDVNSIQEVTKKGK 284 (299)
Q Consensus 215 ~~l~~la~~~~~s~aq~al~~~l~~~~v~~~i~g~~~~~~e~l~enl~a~~--------~~--Lt~e~~~~i~~~~~~~~ 284 (299)
+...+++++++....---+.=++..+.|..|++.+- +..|..-.+++++ +| +|-+|.++|-++.++..
T Consensus 68 ~~a~~~a~~~g~~~~y~d~~ell~~~~iDaV~IatP--~~~H~~~a~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g 145 (393)
T 4fb5_A 68 GLAEARAGEFGFEKATADWRALIADPEVDVVSVTTP--NQFHAEMAIAALEAGKHVWCEKPMAPAYADAERMLATAERSG 145 (393)
T ss_dssp TTHHHHHHHHTCSEEESCHHHHHHCTTCCEEEECSC--GGGHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHSS
T ss_pred HHHHHHHHHhCCCeecCCHHHHhcCCCCcEEEECCC--hHHHHHHHHHHHhcCCeEEEccCCcccHHHHHHhhhhHHhcC
Confidence 456678888887432223445677888999988888 8888777776653 34 67789998888877665
Q ss_pred CCC
Q 022300 285 DLL 287 (299)
Q Consensus 285 ~~~ 287 (299)
...
T Consensus 146 ~~l 148 (393)
T 4fb5_A 146 KVA 148 (393)
T ss_dssp SCE
T ss_pred Ccc
Confidence 443
No 128
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=27.46 E-value=2.5e+02 Score=22.74 Aligned_cols=65 Identities=15% Similarity=0.144 Sum_probs=32.2
Q ss_pred HHHHHHHHcCcccEEEecCC------CHHH---HHHHHHc-CCCeeEeeecccccccChhhHHHHHHHHhCCeEEEc
Q 022300 97 NHLTDLKEEGKIKTVALTNF------DTER---LRIILEN-GIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITY 163 (299)
Q Consensus 97 ~~L~~l~~~Gkir~iGvs~~------~~~~---l~~~~~~-~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~~~ 163 (299)
+.++.+++.| ...|.+... +.+. ++++++. ++.+..+...+. -....-...++.|++.|...+..
T Consensus 34 ~~l~~~~~~G-~~~vEl~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~~~-~~~~~~~~~i~~A~~lGa~~v~~ 108 (257)
T 3lmz_A 34 TTLKTLERLD-IHYLCIKDFHLPLNSTDEQIRAFHDKCAAHKVTGYAVGPIYM-KSEEEIDRAFDYAKRVGVKLIVG 108 (257)
T ss_dssp HHHHHHHHTT-CCEEEECTTTSCTTCCHHHHHHHHHHHHHTTCEEEEEEEEEE-CSHHHHHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHhC-CCEEEEecccCCCCCCHHHHHHHHHHHHHcCCeEEEEecccc-CCHHHHHHHHHHHHHhCCCEEEe
Confidence 3445555555 455655532 3433 3333333 555554443322 11111245778888888777764
No 129
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=27.46 E-value=93 Score=26.51 Aligned_cols=72 Identities=14% Similarity=-0.020 Sum_probs=52.5
Q ss_pred CCCCHHHHHHHHHHHHhhcCCCcccEEEEecCCCCCCcHHHHHHHHHHHHHcCcc-cEEEecCCCHHHHHHHHHc
Q 022300 54 VKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKI-KTVALTNFDTERLRIILEN 127 (299)
Q Consensus 54 ~~~~~~~i~~~ve~SL~~Lg~d~iDl~~lH~pd~~~~~~~~~~~~L~~l~~~Gki-r~iGvs~~~~~~l~~~~~~ 127 (299)
...+.+...+..+-..+-+|++.|-|=.+.......++..+++++.+.|+++|.. --+. +-++...+++.+.
T Consensus 72 G~~taeeAv~~a~lare~~gt~~iKlEvi~d~~~l~pD~~~tv~aa~~L~k~Gf~Vlpy~--~~D~~~ak~l~~~ 144 (268)
T 2htm_A 72 GARTAEEAVRLARLGRLLTGERWVKLEVIPDPTYLLPDPLETLKAAERLIEEDFLVLPYM--GPDLVLAKRLAAL 144 (268)
T ss_dssp TCCSHHHHHHHHHHHHHHHCCSEEBCCCCSCTTTTCCCHHHHHHHHHHHHHTTCEECCEE--CSCHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHhhhHhcCcceeeeeeccCccccCcCHHHHHHHHHHHHHCCCEEeecc--CCCHHHHHHHHhc
Confidence 4568899888888888889999887555555555556689999999999999943 3232 3456666666554
No 130
>3mwc_A Mandelate racemase/muconate lactonizing protein; enolase, structural genomics, protein structure initiative, nysgrc; 1.80A {Kosmotoga olearia}
Probab=27.39 E-value=1.5e+02 Score=26.51 Aligned_cols=102 Identities=12% Similarity=-0.039 Sum_probs=63.5
Q ss_pred CCCHHHHHHHHHHHHhhcCCCcccEEEEecCCCCCCcHHHHHHHHHHHHHcCcc-cEEEecCCCHHHHHHHHHcCCCeeE
Q 022300 55 KMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKI-KTVALTNFDTERLRIILENGIPVVS 133 (299)
Q Consensus 55 ~~~~~~i~~~ve~SL~~Lg~d~iDl~~lH~pd~~~~~~~~~~~~L~~l~~~Gki-r~iGvs~~~~~~l~~~~~~~~~~~~ 133 (299)
.++.+. .+. -+.|+.+++++| ..|-... -++.+.+|++.-.| -..|=+-++.+.+..+++. ..+++
T Consensus 215 ~w~~~~-~~~-~~~l~~~~i~~i-----EqP~~~~-----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~-~~~d~ 281 (400)
T 3mwc_A 215 SFELDQ-WET-FKAMDAAKCLFH-----EQPLHYE-----ALLDLKELGERIETPICLDESLISSRVAEFVAKL-GISNI 281 (400)
T ss_dssp CCCGGG-HHH-HHHHGGGCCSCE-----ESCSCTT-----CHHHHHHHHHHSSSCEEESTTCCSHHHHHHHHHT-TCCSE
T ss_pred CCCHHH-HHH-HHHHHhcCCCEE-----eCCCChh-----hHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHhc-CCCCE
Confidence 345555 333 355676665544 4543222 25667777776444 3455567788999988876 34777
Q ss_pred eeecccccc-cChhhHHHHHHHHhCCeEEEccccccc
Q 022300 134 NQVQHSVVD-MRPQQKMAELCQLTGVKLITYGTVMGG 169 (299)
Q Consensus 134 ~q~~~n~~~-~~~~~~~~~~~~~~gi~v~~~~pl~~G 169 (299)
+|+..+-.- -..-..+.+.|+++|+.++..+.+..|
T Consensus 282 v~~k~~~~GGit~~~~ia~~A~~~gi~~~~~~~~es~ 318 (400)
T 3mwc_A 282 WNIKIQRVGGLLEAIKIYKIATDNGIKLWGGTMPESG 318 (400)
T ss_dssp EEECHHHHTSHHHHHHHHHHHHHTTCEEEECCSCCCH
T ss_pred EEEcchhhCCHHHHHHHHHHHHHcCCEEEecCCCCCH
Confidence 887766431 122356899999999999887655443
No 131
>2p3z_A L-rhamnonate dehydratase; enolase, structural genomics, PSI, protein structure initiat YORK structural genomics research consortium; 1.80A {Salmonella typhimurium LT2} PDB: 3box_A 3cxo_A* 2gsh_A 3d47_A 3d46_A 2i5q_A
Probab=27.39 E-value=1.9e+02 Score=26.07 Aligned_cols=97 Identities=11% Similarity=0.096 Sum_probs=58.7
Q ss_pred CCHHHHHHHHHHHHhhcCCCcccEEEEecCCCCCCcHHHHHHHHHHHHHcCc--c-cEEEecCCCHHHHHHHHHcCCCee
Q 022300 56 MTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGK--I-KTVALTNFDTERLRIILENGIPVV 132 (299)
Q Consensus 56 ~~~~~i~~~ve~SL~~Lg~d~iDl~~lH~pd~~~~~~~~~~~~L~~l~~~Gk--i-r~iGvs~~~~~~l~~~~~~~~~~~ 132 (299)
++.+...+-+++ |+. .++.++-.|-...+ ++.+.+|.+.-. | -..|=+-++...++++++.+ ++
T Consensus 233 ~~~~~Ai~~~~~-l~~-----~~i~~iEqPl~~~d-----~~~~~~l~~~~~~~ipIa~dE~~~~~~~~~~~i~~~--~d 299 (415)
T 2p3z_A 233 QDVNYATKLAHA-CAP-----FNLKWIEECLPPQQ-----YEGYRELKRNAPAGMMVTSGEHHGTLQSFRTLAETG--ID 299 (415)
T ss_dssp CCHHHHHHHHHH-HGG-----GTCCEEECCSCTTC-----HHHHHHHHHHSCTTCEEEECTTCCSHHHHHHHHHTT--CS
T ss_pred CCHHHHHHHHHH-Hhh-----cCCceEeCCCCcch-----HHHHHHHHHhcCCCCcEEcCCCCCCHHHHHHHHHcC--CC
Confidence 455554444433 443 35556666543322 445556665432 2 23455567888888888864 88
Q ss_pred Eeeecccccc-cChhhHHHHHHHHhCCeEEEccc
Q 022300 133 SNQVQHSVVD-MRPQQKMAELCQLTGVKLITYGT 165 (299)
Q Consensus 133 ~~q~~~n~~~-~~~~~~~~~~~~~~gi~v~~~~p 165 (299)
++|+-.+-.- -..-..+.+.|+++|+.++..+.
T Consensus 300 ~i~ik~~~~GGitea~~ia~lA~~~gi~v~~h~~ 333 (415)
T 2p3z_A 300 IMQPDVGWCGGLTTLVEIAALAKSRGQLVVPHGS 333 (415)
T ss_dssp EECCCHHHHTCHHHHHHHHHHHHHTTCCBCCCCC
T ss_pred EEEeCccccCCHHHHHHHHHHHHHcCCEEEecCh
Confidence 8888766431 12234689999999999887643
No 132
>3guv_A Site-specific recombinase, resolvase family prote; structural genomics, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae}
Probab=27.34 E-value=62 Score=24.91 Aligned_cols=30 Identities=13% Similarity=0.137 Sum_probs=16.6
Q ss_pred ccEEEEecCCCCCCcHHHHHHHHHHHHHcC
Q 022300 77 LDMLQFHWWDYSNPGYLDALNHLTDLKEEG 106 (299)
Q Consensus 77 iDl~~lH~pd~~~~~~~~~~~~L~~l~~~G 106 (299)
+|.++++..|.-.....+++..++.|.+.|
T Consensus 76 ~d~lvv~~ldRl~R~~~~~~~~~~~l~~~g 105 (167)
T 3guv_A 76 VSFVLVFKLSRFARNAADVLSTLQIMQDYG 105 (167)
T ss_dssp CSEEEESCGGGTCSSHHHHHHHHHHHHHTT
T ss_pred ccEEEEEeCchhcCCHHHHHHHHHHHHHCC
Confidence 566666655544444455555555555554
No 133
>3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A*
Probab=26.80 E-value=1.9e+02 Score=25.32 Aligned_cols=87 Identities=9% Similarity=0.051 Sum_probs=56.0
Q ss_pred ccEEEEecCCCCCCcHHHHHHHHHHHHHcCccc-EEEecCCCHHHHHHHHHcCCCeeEeeeccccccc-ChhhHHHHHHH
Q 022300 77 LDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIK-TVALTNFDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAELCQ 154 (299)
Q Consensus 77 iDl~~lH~pd~~~~~~~~~~~~L~~l~~~Gkir-~iGvs~~~~~~l~~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~ 154 (299)
.++.++..|-.... ++.+.++++.-.|. ..|=+-++.+.+..+++. ..++++|+..+-.-. ..-..+.+.|+
T Consensus 209 ~~i~~iEqP~~~~d-----~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~-~~~d~v~~k~~~~GGit~~~~i~~~A~ 282 (354)
T 3jva_A 209 YQIELVEQPVKRRD-----LEGLKYVTSQVNTTIMADESCFDAQDALELVKK-GTVDVINIKLMKCGGIHEALKINQICE 282 (354)
T ss_dssp SCEEEEECCSCTTC-----HHHHHHHHHHCSSEEEESTTCCSHHHHHHHHHH-TCCSEEEECHHHHTSHHHHHHHHHHHH
T ss_pred cCCCEEECCCChhh-----HHHHHHHHHhCCCCEEEcCCcCCHHHHHHHHHc-CCCCEEEECchhcCCHHHHHHHHHHHH
Confidence 55666766643322 45666777664443 344456778888888775 346777777654311 22357899999
Q ss_pred HhCCeEEEcccc-ccc
Q 022300 155 LTGVKLITYGTV-MGG 169 (299)
Q Consensus 155 ~~gi~v~~~~pl-~~G 169 (299)
++|+.++..+.+ ..+
T Consensus 283 ~~gi~~~~~~~~~es~ 298 (354)
T 3jva_A 283 TAGIECMIGCMAEETT 298 (354)
T ss_dssp HTTCEEEECCCTTCCH
T ss_pred HcCCeEEecCCCcccH
Confidence 999999987777 443
No 134
>2hxt_A L-fuconate dehydratase; enolase superfamily, D-erythromohydr unknown function; HET: EHM; 1.70A {Xanthomonas campestris PV} PDB: 1yey_A 2hxu_A* 2hne_A
Probab=26.71 E-value=1.1e+02 Score=27.72 Aligned_cols=97 Identities=9% Similarity=0.062 Sum_probs=56.9
Q ss_pred CCCHHHHHHHHHHHHhhcCCCcccEEEEecCCCCCCcHHHHHHHHHHHHHc-Ccc-cEEEecCCCHHHHHHHHHcCCCee
Q 022300 55 KMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEE-GKI-KTVALTNFDTERLRIILENGIPVV 132 (299)
Q Consensus 55 ~~~~~~i~~~ve~SL~~Lg~d~iDl~~lH~pd~~~~~~~~~~~~L~~l~~~-Gki-r~iGvs~~~~~~l~~~~~~~~~~~ 132 (299)
.++.+...+-++. |+.+++++ +..|-.. +-++.+.++++. +.| -..|=+-++.+.++.+++. ...+
T Consensus 252 ~~~~~~a~~~~~~-l~~~~i~~-----iEqP~~~-----~d~~~~~~l~~~~~~iPIa~dE~~~~~~~~~~~i~~-~~~d 319 (441)
T 2hxt_A 252 RWDVGPAIDWMRQ-LAEFDIAW-----IEEPTSP-----DDVLGHAAIRQGITPVPVSTGEHTQNRVVFKQLLQA-GAVD 319 (441)
T ss_dssp CCCHHHHHHHHHT-TGGGCCSC-----EECCSCT-----TCHHHHHHHHHHHTTSCEEECTTCCSHHHHHHHHHH-TCCS
T ss_pred CCCHHHHHHHHHH-HHhcCCCe-----eeCCCCH-----HHHHHHHHHHhhCCCCCEEEeCCcCCHHHHHHHHHc-CCCC
Confidence 3455655554444 55555543 3444221 224556666665 223 3444456678888888876 3477
Q ss_pred Eeeecccccc-cChhhHHHHHHHHhCCeEEEc
Q 022300 133 SNQVQHSVVD-MRPQQKMAELCQLTGVKLITY 163 (299)
Q Consensus 133 ~~q~~~n~~~-~~~~~~~~~~~~~~gi~v~~~ 163 (299)
++|+..+-.- -..-..+...|+++|+.++.+
T Consensus 320 ~v~ik~~~~GGite~~~ia~~A~~~g~~~~~h 351 (441)
T 2hxt_A 320 LIQIDAARVGGVNENLAILLLAAKFGVRVFPH 351 (441)
T ss_dssp EECCCTTTSSHHHHHHHHHHHHHHTTCEECCC
T ss_pred EEEeCcceeCCHHHHHHHHHHHHHcCCeEEEe
Confidence 7777766431 112346889999999998654
No 135
>3l8m_A Probable thiamine pyrophosphokinase; thiamin diphosphate biosynthetic process, ATP binding, structural genomics, PSI-2; 2.40A {Staphylococcus saprophyticus}
Probab=26.64 E-value=92 Score=25.33 Aligned_cols=41 Identities=10% Similarity=0.046 Sum_probs=35.5
Q ss_pred CCCHHHHHHHHHHhCCCCceeeeccCCCCHHHHHHhHhhhc
Q 022300 225 GVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFM 265 (299)
Q Consensus 225 ~~s~aq~al~~~l~~~~v~~~i~g~~~~~~e~l~enl~a~~ 265 (299)
..|-.++||+|+++++.-..+++|+.-.+.+|.-.|+..+-
T Consensus 74 D~TD~e~Al~~a~~~~~~~I~i~Ga~GgR~DH~lani~ll~ 114 (212)
T 3l8m_A 74 DDTDLALGIDQAVKRGYRNIDVYGATGGRLDHFMGALQILE 114 (212)
T ss_dssp CBCHHHHHHHHHHHTTCCEEEEESCSSSCHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHCCCCEEEEEcCCCCchhHHHHHHHHHH
Confidence 45788999999999988888999998889999999987763
No 136
>2hzg_A Mandelate racemase/muconate lactonizing enzyme/EN superfamily; structural genomics, predicted mandelate racemase, PSI; 2.02A {Rhodobacter sphaeroides}
Probab=26.30 E-value=3.1e+02 Score=24.26 Aligned_cols=95 Identities=9% Similarity=0.068 Sum_probs=55.5
Q ss_pred CHHHHHHHHHHHHhhcCCCcccEEEEecCCCCCCcHHHHHHHHHHHHH-cCcccEEEe-cCCCHHHHHHHHHcCCCeeEe
Q 022300 57 TSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKE-EGKIKTVAL-TNFDTERLRIILENGIPVVSN 134 (299)
Q Consensus 57 ~~~~i~~~ve~SL~~Lg~d~iDl~~lH~pd~~~~~~~~~~~~L~~l~~-~Gkir~iGv-s~~~~~~l~~~~~~~~~~~~~ 134 (299)
+.+...+-++. |+.+++++ +..|-.. +-++.+.++++ .-.|-=++- +-++.+.++++++. ...+++
T Consensus 207 ~~~~a~~~~~~-l~~~~i~~-----iEqP~~~-----~d~~~~~~l~~~~~~iPI~~dE~~~~~~~~~~~i~~-~~~d~v 274 (401)
T 2hzg_A 207 DVEAAAARLPT-LDAAGVLW-----LEEPFDA-----GALAAHAALAGRGARVRIAGGEAAHNFHMAQHLMDY-GRIGFI 274 (401)
T ss_dssp CHHHHHTTHHH-HHHTTCSE-----EECCSCT-----TCHHHHHHHHTTCCSSEEEECTTCSSHHHHHHHHHH-SCCSEE
T ss_pred CHHHHHHHHHH-HHhcCCCE-----EECCCCc-----cCHHHHHHHHhhCCCCCEEecCCcCCHHHHHHHHHC-CCCCEE
Confidence 55555444443 55555543 3343221 23566667776 544443332 24467888888775 346777
Q ss_pred eeccccccc-ChhhHHHHHHHHhCCeEEEc
Q 022300 135 QVQHSVVDM-RPQQKMAELCQLTGVKLITY 163 (299)
Q Consensus 135 q~~~n~~~~-~~~~~~~~~~~~~gi~v~~~ 163 (299)
|+-.+-.-. ..-.++.+.|+++|+.++..
T Consensus 275 ~ik~~~~GGit~~~~i~~~A~~~g~~~~~h 304 (401)
T 2hzg_A 275 QIDCGRIGGLGPAKRVADAAQARGITYVNH 304 (401)
T ss_dssp EECHHHHTSHHHHHHHHHHHHHHTCEEEEC
T ss_pred EeCcchhCCHHHHHHHHHHHHHcCCEEecC
Confidence 776654311 22346899999999999876
No 137
>3mz2_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics; HET: MSE PE4; 1.55A {Parabacteroides distasonis}
Probab=26.29 E-value=1.3e+02 Score=25.77 Aligned_cols=66 Identities=11% Similarity=0.021 Sum_probs=40.7
Q ss_pred HHHHHcCcccEEEecCCCHHHHHHHHHc--CCCeeEeee-------------c-------ccccccChhhHHHHHHHHhC
Q 022300 100 TDLKEEGKIKTVALTNFDTERLRIILEN--GIPVVSNQV-------------Q-------HSVVDMRPQQKMAELCQLTG 157 (299)
Q Consensus 100 ~~l~~~Gkir~iGvs~~~~~~l~~~~~~--~~~~~~~q~-------------~-------~n~~~~~~~~~~~~~~~~~g 157 (299)
+.+++.|....+=+++|+.+.+.++.+. .++...... + +++-......++++.|+++|
T Consensus 149 ~~l~~~~~~~~vii~Sf~~~~l~~~~~~~p~~~~~~l~~~~~~l~~~~~~g~~~~~~~~~~~~~~~~~~~~~V~~ah~~G 228 (292)
T 3mz2_A 149 QLITDMQAEPYVMITVHDGASARFFYEKNPNFMFEAFVKTKEAVQDYEDNGIPWSHIMAYVGPKITPEVREVIDMLHERG 228 (292)
T ss_dssp HHHHHTTCTTTEEEEESSHHHHHHHHHHCTTCCEEEECCSHHHHHHHHHTTCCGGGEEEEEESSCCHHHHHHHHHHHHTT
T ss_pred HHHHHcCCCCCEEEEECCHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHhCCChhheeeeecccccccCHHHHHHHHHCC
Confidence 3445557777788889999888888765 232222210 0 01100112346899999999
Q ss_pred CeEEEccc
Q 022300 158 VKLITYGT 165 (299)
Q Consensus 158 i~v~~~~p 165 (299)
+.|.+|.+
T Consensus 229 ~~V~vWTv 236 (292)
T 3mz2_A 229 VMCMISTA 236 (292)
T ss_dssp BCEEEECT
T ss_pred CEEEEEeC
Confidence 99999853
No 138
>1v5x_A PRA isomerase, phosphoribosylanthranilate isomerase; alpha-beta barrel, TRPF, riken structural genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.1.2.4
Probab=26.24 E-value=1.4e+02 Score=24.01 Aligned_cols=74 Identities=8% Similarity=-0.049 Sum_probs=45.8
Q ss_pred CHHHHHHHHHHHHhhcCCCcccEEEEecCCCCCCcHHHHHHHHHHHHHcCcccEEEec-CCCHHHHHHHHHcCCCeeEee
Q 022300 57 TSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALT-NFDTERLRIILENGIPVVSNQ 135 (299)
Q Consensus 57 ~~~~i~~~ve~SL~~Lg~d~iDl~~lH~pd~~~~~~~~~~~~L~~l~~~Gkir~iGvs-~~~~~~l~~~~~~~~~~~~~q 135 (299)
+++.++.+. ++|.||+=+.+. -+.+..- ..+....|.... ...+..+||- |-+.+.+.++.+. ..++++|
T Consensus 10 ~~eda~~a~-----~~GaD~iGfif~-~~SpR~V-~~~~a~~i~~~~-~~~~~~VgVfvn~~~~~i~~~~~~-~~ld~vQ 80 (203)
T 1v5x_A 10 RLEDALLAE-----ALGAFALGFVLA-PGSRRRI-APEAARAIGEAL-GPFVVRVGVFRDQPPEEVLRLMEE-ARLQVAQ 80 (203)
T ss_dssp CHHHHHHHH-----HHTCSEEEEECC-TTCTTBC-CHHHHHHHHHHS-CSSSEEEEEESSCCHHHHHHHHHH-TTCSEEE
T ss_pred cHHHHHHHH-----HcCCCEEEEEec-CCCCCcC-CHHHHHHHHHhC-CCCCCEEEEEeCCCHHHHHHHHHh-hCCCEEE
Confidence 456665544 579999887742 2222222 123333333222 2468899987 6788888888875 6789999
Q ss_pred eccc
Q 022300 136 VQHS 139 (299)
Q Consensus 136 ~~~n 139 (299)
++-+
T Consensus 81 LHG~ 84 (203)
T 1v5x_A 81 LHGE 84 (203)
T ss_dssp ECSC
T ss_pred ECCC
Confidence 9743
No 139
>1ta3_B Endo-1,4-beta-xylanase; beta alpha barrel (XIP-I), beta alpha barrel (xylanase), HYD inhibitor-hydrolase complex; HET: NAG; 1.70A {Emericella nidulans} SCOP: c.1.8.3
Probab=26.23 E-value=3.1e+02 Score=23.44 Aligned_cols=73 Identities=12% Similarity=0.137 Sum_probs=44.3
Q ss_pred HHHHHHHHHHHHHcCc-ccEEEecCC-----C-HHHHHHHHHc----CC-CeeEeeecccccccCh--hhHHHHHHHHhC
Q 022300 92 YLDALNHLTDLKEEGK-IKTVALTNF-----D-TERLRIILEN----GI-PVVSNQVQHSVVDMRP--QQKMAELCQLTG 157 (299)
Q Consensus 92 ~~~~~~~L~~l~~~Gk-ir~iGvs~~-----~-~~~l~~~~~~----~~-~~~~~q~~~n~~~~~~--~~~~~~~~~~~g 157 (299)
....++.++.|+++|. |..||+-.| . .+.+...++. |. ++.+..+...- ... -..+++.|.++.
T Consensus 183 ~~~~~~~v~~l~~~G~~iDgiG~Q~H~~~~~~~~~~~~~~l~~~a~~G~~pi~iTEldi~~--~qa~~y~~~~~~~~~~~ 260 (303)
T 1ta3_B 183 TQAMASYVKKWLAEGVPIDGIGSQAHYSSSHWSSTEAAGALSSLANTGVSEVAITELDIAG--AASSDYLNLLNACLNEQ 260 (303)
T ss_dssp HHHHHHHHHHHHHTTCCCCEEEECCEECTTCCCGGGHHHHHHHHHTTCCSEEEEEEEEETT--CCHHHHHHHHHHHHTCT
T ss_pred HHHHHHHHHHHHHCCCCcceEEEeeecCCCCCCHHHHHHHHHHHHHCCCCeEEEeeCCcCh--hHHHHHHHHHHHHHhCC
Confidence 3467788888999997 899998433 1 2444444443 66 55554444441 222 235788888875
Q ss_pred --CeEEEcccc
Q 022300 158 --VKLITYGTV 166 (299)
Q Consensus 158 --i~v~~~~pl 166 (299)
++|+.|+.-
T Consensus 261 ~v~git~Wg~~ 271 (303)
T 1ta3_B 261 KCVGITVWGVS 271 (303)
T ss_dssp TEEEEEESCSB
T ss_pred CceEEEEecCC
Confidence 667777543
No 140
>3sma_A FRBF; N-acetyl transferase, acetyl COA binding, transferase; HET: ACO; 2.00A {Streptomyces rubellomurinus}
Probab=25.90 E-value=1.2e+02 Score=26.20 Aligned_cols=53 Identities=17% Similarity=0.105 Sum_probs=39.0
Q ss_pred HHHHHHHHhhcCCCcccEEEEecCCCCCC----cHHHHHHHHHHHHH-cCcccEEEec
Q 022300 62 RESIDVSRRRMDVPCLDMLQFHWWDYSNP----GYLDALNHLTDLKE-EGKIKTVALT 114 (299)
Q Consensus 62 ~~~ve~SL~~Lg~d~iDl~~lH~pd~~~~----~~~~~~~~L~~l~~-~Gkir~iGvs 114 (299)
++++.+.|+.||+..=|.+++|.--.... .-+.++++|.+++- +|-+-.--++
T Consensus 24 ~~~L~~~L~~LGI~~Gd~llVHsSL~~lG~v~Gga~~vi~AL~~~vg~~GTLvmPt~t 81 (286)
T 3sma_A 24 RDRLASDLAALGVRPGGVLLVHASLSALGWVCGGAQAVVLALQDAVGKEGTLVMPTFS 81 (286)
T ss_dssp HHHHHHHHHHHTCCTTCEEEEEECSTTSCEETTHHHHHHHHHHHHHCTTCEEEEECCC
T ss_pred HHHHHHHHHHcCCCCCCEEEEEechHHhCCCCCCHHHHHHHHHHHhcCCCEEEEeccC
Confidence 46777889999999999999997422221 24678999988884 7877665544
No 141
>3p3b_A Mandelate racemase/muconate lactonizing protein; enolase superfamily fold, galacturonate dehydratase, D-tartr galacturonate, lyase; HET: TAR; 1.65A {Geobacillus SP} PDB: 3ops_A* 3n4f_A* 3qpe_A*
Probab=25.74 E-value=3e+02 Score=24.30 Aligned_cols=95 Identities=11% Similarity=-0.053 Sum_probs=55.7
Q ss_pred CCCHHHHHHHHHHHHhhcCCCcccEEEEecCCCCCCcHHHHHHHHHHHHHc-----CcccEEEecCCCHHHHHHHHHcCC
Q 022300 55 KMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEE-----GKIKTVALTNFDTERLRIILENGI 129 (299)
Q Consensus 55 ~~~~~~i~~~ve~SL~~Lg~d~iDl~~lH~pd~~~~~~~~~~~~L~~l~~~-----Gkir~iGvs~~~~~~l~~~~~~~~ 129 (299)
.++.+...+-+++ |+. .++.++..|-. . -++.+.++++. -.|.=.+---++.+.++++++. .
T Consensus 211 ~~~~~~ai~~~~~-l~~-----~~i~~iE~P~~--~----d~~~~~~l~~~l~~~g~~iPIa~dE~~~~~~~~~~i~~-~ 277 (392)
T 3p3b_A 211 AYNLNLTKEVLAA-LSD-----VNLYWLEEAFH--E----DEALYEDLKEWLGQRGQNVLIADGEGLASPHLIEWATR-G 277 (392)
T ss_dssp CCCHHHHHHHHHH-TTT-----SCEEEEECSSS--C----CHHHHHHHHHHHHHHTCCCEEEECCSSCCTTHHHHHHT-T
T ss_pred CCCHHHHHHHHHH-HHh-----cCCCEEecCCc--c----cHHHHHHHHHhhccCCCCccEEecCCCCHHHHHHHHHc-C
Confidence 3455554444333 333 34556666643 2 23455556654 2332222114567788888775 3
Q ss_pred CeeEeeecccccccCh-hhHHHHHHHHhCCeEEEc
Q 022300 130 PVVSNQVQHSVVDMRP-QQKMAELCQLTGVKLITY 163 (299)
Q Consensus 130 ~~~~~q~~~n~~~~~~-~~~~~~~~~~~gi~v~~~ 163 (299)
..+++|+-.+-. .-. -..+...|+++|+.++..
T Consensus 278 ~~d~v~ik~~~~-Git~~~~i~~~A~~~gi~~~~h 311 (392)
T 3p3b_A 278 RVDVLQYDIIWP-GFTHWMELGEKLDAHGLRSAPH 311 (392)
T ss_dssp SCCEECCBTTTB-CHHHHHHHHHHHHHTTCEECCB
T ss_pred CCCEEEeCcccc-CHHHHHHHHHHHHHcCCEEEec
Confidence 577888877764 222 246899999999999886
No 142
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=25.61 E-value=3.8e+02 Score=24.36 Aligned_cols=87 Identities=11% Similarity=0.070 Sum_probs=47.0
Q ss_pred CCCcEEEEecccCCCCCCCHHHHHHHHHHHHhhcCCC-----cccEEEEecCCCCCCcH---HHHHHHHHH-HHH-----
Q 022300 39 HQSSWISLTKWVPPPVKMTSSIVRESIDVSRRRMDVP-----CLDMLQFHWWDYSNPGY---LDALNHLTD-LKE----- 104 (299)
Q Consensus 39 ~R~~i~I~tK~~~~~~~~~~~~i~~~ve~SL~~Lg~d-----~iDl~~lH~pd~~~~~~---~~~~~~L~~-l~~----- 104 (299)
.-+-|+|.|-+-..--+ ..++...+++..+ -+.++.+|.|....... +.++++|.+ +.+
T Consensus 92 ~P~~I~V~tTC~~e~IG-------dDi~~v~~~~~~~~~~~~~~pVi~v~tpgf~gs~~~G~~~a~~al~~~l~~~~~~~ 164 (458)
T 3pdi_B 92 NPSVIGLLTTGLSETQG-------CDLHTALHEFRTQYEEYKDVPIVPVNTPDFSGCFESGFAAAVKAIVETLVPERRDQ 164 (458)
T ss_dssp CCSEEEEEECHHHHTTC-------TTHHHHHHHTTTSCCSCSCSCEEEECCCTTSSCHHHHHHHHHHHHHHHSSCSSSCT
T ss_pred CCCEEEEECCcHHHHhc-------CCHHHHHHHHHHhccccCCCeEEEeeCCCcCCchhHHHHHHHHHHHHHhhccccCc
Confidence 35677777777432222 2333333333332 47899999998775522 344454443 221
Q ss_pred ----cCcccEE-EecCCC--HHHHHHHHHc-CCCee
Q 022300 105 ----EGKIKTV-ALTNFD--TERLRIILEN-GIPVV 132 (299)
Q Consensus 105 ----~Gkir~i-Gvs~~~--~~~l~~~~~~-~~~~~ 132 (299)
.++|.-| |..++. .++++.+++. |+.+.
T Consensus 165 ~~~~~~~VNii~G~~~~~~D~~eik~lL~~~Gi~v~ 200 (458)
T 3pdi_B 165 VGKRPRQVNVLCSANLTPGDLEYIAESIESFGLRPL 200 (458)
T ss_dssp TCCCSSEEEEEECTTCCHHHHHHHHHHHHTTTCEEE
T ss_pred CCCCCCeEEEEeCCCCChHHHHHHHHHHHHcCCEEE
Confidence 2466777 765433 3456666665 54443
No 143
>1wdd_S Ribulose bisphosphate carboxylase small chain C; rubisco, photosynthesis, alpha/beta barrel, N-methylmethioni translational modification, lyase; HET: KCX CAP; 1.35A {Oryza sativa} SCOP: d.73.1.1 PDB: 3axm_S* 3axk_S* 8ruc_I* 1aus_S 1rbo_S* 1rco_S* 1rcx_S* 1rxo_S* 1upm_C* 1upp_I* 1aa1_S* 3rub_S 1rlc_S* 1rld_S 1ej7_S 1ir1_S* 4rub_S*
Probab=25.37 E-value=1.4e+02 Score=22.35 Aligned_cols=64 Identities=11% Similarity=0.080 Sum_probs=42.6
Q ss_pred CCCCHHHHHHHHHHHHhh---cCCCcccE-----------------EEE--ecCCCCCCcHHHHHHHHHHHHHc---Ccc
Q 022300 54 VKMTSSIVRESIDVSRRR---MDVPCLDM-----------------LQF--HWWDYSNPGYLDALNHLTDLKEE---GKI 108 (299)
Q Consensus 54 ~~~~~~~i~~~ve~SL~~---Lg~d~iDl-----------------~~l--H~pd~~~~~~~~~~~~L~~l~~~---Gki 108 (299)
.+++.+.|.++|+..|++ .++++-|- |+- -.|-....+..+++..+++++++ ..|
T Consensus 19 P~lt~eqI~kQI~Yll~qGw~p~lEf~d~~~~~R~~~~~~~~~~~~yW~mWkLPmFg~td~~~Vl~El~~C~k~~P~~YV 98 (128)
T 1wdd_S 19 PPLTVEDLLKQIEYLLRSKWVPCLEFSKVGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDATQVLKELEEAKKAYPDAFV 98 (128)
T ss_dssp SCCCHHHHHHHHHHHHHTTCEEEEEEESCCSCBCSSCCSTTCCBSCCCEEESCCCTTCCCHHHHHHHHHHHHHHCTTSEE
T ss_pred CCCCHHHHHHHHHHHHHCCCeeeEEecCCCceeeccCCCCCcccCCcccccCccCccCCCHHHHHHHHHHHHHHCCCCeE
Confidence 367889999999998886 22333221 111 12333444467999999999975 789
Q ss_pred cEEEecCCC
Q 022300 109 KTVALTNFD 117 (299)
Q Consensus 109 r~iGvs~~~ 117 (299)
|-||+.|..
T Consensus 99 RligfDn~~ 107 (128)
T 1wdd_S 99 RIIGFDNVR 107 (128)
T ss_dssp EEEEEETTT
T ss_pred EEEEEeCCC
Confidence 999998643
No 144
>2ox4_A Putative mandelate racemase; enolase, dehydratase, structural genomics, protein structure initiative, PSI, nysgrc; 1.80A {Zymomonas mobilis}
Probab=25.21 E-value=2.8e+02 Score=24.50 Aligned_cols=110 Identities=8% Similarity=-0.022 Sum_probs=61.2
Q ss_pred cEEEEecccCCCCCCCHHHHHHHHHHHHhhcCCCcccEEEEecCCCCCCcHHHHHHHHHHHHHcCcccEEEec-CCCHHH
Q 022300 42 SWISLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALT-NFDTER 120 (299)
Q Consensus 42 ~i~I~tK~~~~~~~~~~~~i~~~ve~SL~~Lg~d~iDl~~lH~pd~~~~~~~~~~~~L~~l~~~Gkir~iGvs-~~~~~~ 120 (299)
++-|.-... ..++.+...+-++. |+.+ ++.++..|-.. +-++.+.++++.-.|-=.+-- -++.+.
T Consensus 209 d~~l~vDan---~~~~~~~ai~~~~~-l~~~-----~i~~iE~P~~~-----~d~~~~~~l~~~~~iPIa~dE~~~~~~~ 274 (403)
T 2ox4_A 209 DVDIIVENH---GHTDLVSAIQFAKA-IEEF-----NIFFYEEINTP-----LNPRLLKEAKKKIDIPLASGERIYSRWG 274 (403)
T ss_dssp TSEEEEECT---TCSCHHHHHHHHHH-HGGG-----CEEEEECCSCT-----TSTHHHHHHHHTCCSCEEECTTCCHHHH
T ss_pred CCeEEEECC---CCCCHHHHHHHHHH-HHhh-----CCCEEeCCCCh-----hhHHHHHHHHHhCCCCEEecCCcCCHHH
Confidence 444444442 23455555444443 4444 33445554322 224566666666555444333 335677
Q ss_pred HHHHHHcCCCeeEeeecccccc-cChhhHHHHHHHHhCCeEEEcccc
Q 022300 121 LRIILENGIPVVSNQVQHSVVD-MRPQQKMAELCQLTGVKLITYGTV 166 (299)
Q Consensus 121 l~~~~~~~~~~~~~q~~~n~~~-~~~~~~~~~~~~~~gi~v~~~~pl 166 (299)
++++++. -..+++|+-.+-.- -..-..+...|+++|+.++.....
T Consensus 275 ~~~~i~~-~~~d~v~ik~~~~GGite~~~i~~~A~~~g~~~~~h~~~ 320 (403)
T 2ox4_A 275 FLPFLED-RSIDVIQPDLGTCGGFTEFKKIADMAHIFEVTVQAHVAG 320 (403)
T ss_dssp HHHHHHT-TCCSEECCCHHHHTHHHHHHHHHHHHHHTTCEECCCCCS
T ss_pred HHHHHHc-CCCCEEecCccccCCHHHHHHHHHHHHHcCCEEeecCCC
Confidence 7777765 34677777665421 112346899999999999987663
No 145
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=25.14 E-value=48 Score=28.83 Aligned_cols=69 Identities=13% Similarity=0.180 Sum_probs=47.5
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHhCCCCceeeeccCCCCHHHHHHhHhhhc--------CC--CCHHHHHHHHHHHhcCC
Q 022300 215 QTLKRIASKHGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFM--------LS--LDEDDVNSIQEVTKKGK 284 (299)
Q Consensus 215 ~~l~~la~~~~~s~aq~al~~~l~~~~v~~~i~g~~~~~~e~l~enl~a~~--------~~--Lt~e~~~~i~~~~~~~~ 284 (299)
+...++|+++|+..+=-.+.=++..+.|..|++.+- +..|..-.+++++ +| +|.+|.++|-++.++..
T Consensus 60 ~~a~~~a~~~g~~~~y~d~~ell~~~~iDaV~I~tP--~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~~ 137 (350)
T 4had_A 60 TRAREMADRFSVPHAFGSYEEMLASDVIDAVYIPLP--TSQHIEWSIKAADAGKHVVCEKPLALKAGDIDAVIAARDRNK 137 (350)
T ss_dssp HHHHHHHHHHTCSEEESSHHHHHHCSSCSEEEECSC--GGGHHHHHHHHHHTTCEEEECSCCCSSGGGGHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCeeeCCHHHHhcCCCCCEEEEeCC--CchhHHHHHHHHhcCCEEEEeCCcccchhhHHHHHHHHHHcC
Confidence 567788999987422123444567888999998888 7777766666553 34 56788888877766554
Q ss_pred C
Q 022300 285 D 285 (299)
Q Consensus 285 ~ 285 (299)
.
T Consensus 138 ~ 138 (350)
T 4had_A 138 V 138 (350)
T ss_dssp C
T ss_pred C
Confidence 3
No 146
>2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A*
Probab=24.54 E-value=3.7e+02 Score=23.80 Aligned_cols=110 Identities=5% Similarity=0.019 Sum_probs=65.4
Q ss_pred CcEEEEecccCCCCCCCHHHHHHHHHHHHhhcCCCcccEEEEecCCCCCCcHHHHHHHHHHHHHcCcccEEEe-cCCCHH
Q 022300 41 SSWISLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVAL-TNFDTE 119 (299)
Q Consensus 41 ~~i~I~tK~~~~~~~~~~~~i~~~ve~SL~~Lg~d~iDl~~lH~pd~~~~~~~~~~~~L~~l~~~Gkir~iGv-s~~~~~ 119 (299)
.++-|..... ..++.+...+-++. |+.+ ++.++..|-.. +-++.+.++++.-.|-=.+- +-++.+
T Consensus 217 ~d~~l~vDan---~~~~~~~ai~~~~~-l~~~-----~i~~iE~P~~~-----~~~~~~~~l~~~~~iPIa~dE~~~~~~ 282 (410)
T 2gl5_A 217 DDADIIVEIH---SLLGTNSAIQFAKA-IEKY-----RIFLYEEPIHP-----LNSDNMQKVSRSTTIPIATGERSYTRW 282 (410)
T ss_dssp SSSEEEEECT---TCSCHHHHHHHHHH-HGGG-----CEEEEECSSCS-----SCHHHHHHHHHHCSSCEEECTTCCTTH
T ss_pred CCCEEEEECC---CCCCHHHHHHHHHH-HHhc-----CCCeEECCCCh-----hhHHHHHHHHhhCCCCEEecCCcCCHH
Confidence 3555554442 24566666555544 5554 44456655332 22556666766655543333 344678
Q ss_pred HHHHHHHcCCCeeEeeecccccc-cChhhHHHHHHHHhCCeEEEccc
Q 022300 120 RLRIILENGIPVVSNQVQHSVVD-MRPQQKMAELCQLTGVKLITYGT 165 (299)
Q Consensus 120 ~l~~~~~~~~~~~~~q~~~n~~~-~~~~~~~~~~~~~~gi~v~~~~p 165 (299)
.++++++. ...+++|+..+-.- -..-..+..+|+++|+.++....
T Consensus 283 ~~~~~i~~-~~~d~v~ik~~~~GGit~~~~ia~~A~~~gi~~~~h~~ 328 (410)
T 2gl5_A 283 GYRELLEK-QSIAVAQPDLCLCGGITEGKKICDYANIYDTTVQVHVC 328 (410)
T ss_dssp HHHHHHHT-TCCSEECCCTTTTTHHHHHHHHHHHHHTTTCEECCCCC
T ss_pred HHHHHHHc-CCCCEEecCccccCCHHHHHHHHHHHHHcCCeEeecCC
Confidence 88888875 34777787766431 12234689999999999988765
No 147
>3aek_B Light-independent protochlorophyllide reductase S; iron/sulfur cluster, oxidoreductase, bacteriochlorophyll biosynthesis; HET: PMR; 2.30A {Rhodobacter capsulatus} PDB: 3aeq_B* 3aer_B 3aes_B* 3aeu_B 3aet_B
Probab=24.43 E-value=4.3e+02 Score=24.53 Aligned_cols=86 Identities=13% Similarity=0.142 Sum_probs=50.9
Q ss_pred CCcEEEEecccCCCCCCCHHHHHHHHHHHHhhcCCCcccEEEEecCCCCCCcHHHHHHHHHHHHH----------cCccc
Q 022300 40 QSSWISLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKE----------EGKIK 109 (299)
Q Consensus 40 R~~i~I~tK~~~~~~~~~~~~i~~~ve~SL~~Lg~d~iDl~~lH~pd~~~~~~~~~~~~L~~l~~----------~Gkir 109 (299)
-+-|+|.|-+-+.--+.+.+.+.+.++ . -+.++.+|.|..........-.++..+++ .++|.
T Consensus 86 P~~I~V~tTC~~elIGdDi~~v~~~~~-------~-~~pVi~v~tpgf~g~~~~G~~~al~alv~~~~~~~~~~~~~~VN 157 (525)
T 3aek_B 86 PQAMAVALTCTAELLQDDPNGISRALN-------L-PVPVVPLELPSYSRKENYGADETFRALVRALAVPMERTPEVTCN 157 (525)
T ss_dssp CSEEEEEECTTGGGSCCCHHHHHHHHT-------C-SSCEEECCCCTTTCCHHHHHHHHHHHHHHHHCCCCCCCSSCEEE
T ss_pred CCEEEEECCcHHHHhcccHHHHHHHhc-------C-CCCEEEEECCCcCCchhHHHHHHHHHHHHHhccCccCCCCCceE
Confidence 345888888755333445555555554 2 57899999998776533333334444432 24688
Q ss_pred EEEecCC------CHHHHHHHHHc-CCCeeE
Q 022300 110 TVALTNF------DTERLRIILEN-GIPVVS 133 (299)
Q Consensus 110 ~iGvs~~------~~~~l~~~~~~-~~~~~~ 133 (299)
-||..+. +.++++.+++. |+.+.+
T Consensus 158 IlG~~~~g~~~~gD~~eikrlL~~~Gi~v~~ 188 (525)
T 3aek_B 158 LLGATALGFRHRDDVAEVTKLLATMGIKVNV 188 (525)
T ss_dssp EEEECTTCTTHHHHHHHHHHHHHTTTCEEEE
T ss_pred EEecCCCCCCChhhHHHHHHHHHHCCCeEEE
Confidence 8898763 23566666665 554433
No 148
>3otr_A Enolase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel, TIM barrel; 2.75A {Toxoplasma gondii}
Probab=24.30 E-value=4.2e+02 Score=24.32 Aligned_cols=98 Identities=9% Similarity=0.055 Sum_probs=62.6
Q ss_pred CCHHHHHHHHHHHHhhcCCCcccEEEEecCCCCCCcHHHHHHHHHHHHHcCcccEEEe--cCCCHHHHHHHHHcCCCeeE
Q 022300 56 MTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVAL--TNFDTERLRIILENGIPVVS 133 (299)
Q Consensus 56 ~~~~~i~~~ve~SL~~Lg~d~iDl~~lH~pd~~~~~~~~~~~~L~~l~~~Gkir~iGv--s~~~~~~l~~~~~~~~~~~~ 133 (299)
.+++.+.+..++-+++. ++++|-.|-...+ + +.|..|.+-.. .+|-=+|= ...++..++++++. -...+
T Consensus 281 ~t~~Elid~y~~lle~y-----pIv~IEDPl~~dD-~-eg~a~Lt~~lg-~~iqIvGDDl~vTn~~~i~~~Ie~-~a~n~ 351 (452)
T 3otr_A 281 LTGEKLKEVYEGWLKKY-----PIISVEDPFDQDD-F-ASFSAFTKDVG-EKTQVIGDDILVTNILRIEKALKD-KACNC 351 (452)
T ss_dssp ECHHHHHHHHHHHHHHS-----CEEEEECCSCTTC-H-HHHHHHHHHHT-TTSEEEESTTTTTCHHHHHHHHHH-TCCSE
T ss_pred ccHHHHHHHHHHHHhhh-----CceEEecCCChhh-H-HHHHHHHHhhC-CCeEEEeCccccCCHHHHHHHHhc-CCCCE
Confidence 47888888888777764 4888988865554 2 33444433221 24655662 34478999998876 34566
Q ss_pred eeecccccc-cChhhHHHHHHHHhCCeEEE
Q 022300 134 NQVQHSVVD-MRPQQKMAELCQLTGVKLIT 162 (299)
Q Consensus 134 ~q~~~n~~~-~~~~~~~~~~~~~~gi~v~~ 162 (299)
+++-.|-.- -....+++..|+++|++++.
T Consensus 352 IlIKvnQIGgITEalka~~lA~~~G~~vmv 381 (452)
T 3otr_A 352 LLLKVNQIGSVTEAIEACLLAQKSGWGVQV 381 (452)
T ss_dssp EEECHHHHCCHHHHHHHHHHHHHTTCEEEE
T ss_pred EEeeccccccHHHHHHHHHHHHHcCCeEEE
Confidence 666665321 12234688999999999766
No 149
>1wuf_A Hypothetical protein LIN2664; structural genomics, unknown function, nysgxrc target T2186, superfamily, protein structure initiative, PSI; 2.90A {Listeria innocua} SCOP: c.1.11.2 d.54.1.1
Probab=24.19 E-value=1.5e+02 Score=26.43 Aligned_cols=87 Identities=13% Similarity=0.024 Sum_probs=56.2
Q ss_pred ccEEEEecCCCCCCcHHHHHHHHHHHHHcCcc-cEEEecCCCHHHHHHHHHcCCCeeEeeeccccccc-ChhhHHHHHHH
Q 022300 77 LDMLQFHWWDYSNPGYLDALNHLTDLKEEGKI-KTVALTNFDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAELCQ 154 (299)
Q Consensus 77 iDl~~lH~pd~~~~~~~~~~~~L~~l~~~Gki-r~iGvs~~~~~~l~~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~ 154 (299)
.++.++-.|-...+ ++.+.+|.+.-.| -..|=+-++.+.++.+++. ..++++|+-.+-.-. ..-..+.+.|+
T Consensus 227 ~~i~~iEqP~~~~d-----~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~-~a~d~v~ik~~~~GGit~~~~ia~~A~ 300 (393)
T 1wuf_A 227 YDLEMIEQPFGTKD-----FVDHAWLQKQLKTRICLDENIRSVKDVEQAHSI-GSCRAINLKLARVGGMSSALKIAEYCA 300 (393)
T ss_dssp GTCSEEECCSCSSC-----SHHHHHHHTTCSSEEEECTTCCSHHHHHHHHHH-TCCSEEEECTGGGTSHHHHHHHHHHHH
T ss_pred CCCeEEECCCCCcC-----HHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHh-CCCCEEEeChhhhCCHHHHHHHHHHHH
Confidence 45666766643322 3456666665443 3444556788888888876 347788887765321 22346899999
Q ss_pred HhCCeEEEccccccc
Q 022300 155 LTGVKLITYGTVMGG 169 (299)
Q Consensus 155 ~~gi~v~~~~pl~~G 169 (299)
++|+.++..+.+..|
T Consensus 301 ~~gi~~~~~~~~es~ 315 (393)
T 1wuf_A 301 LNEILVWCGGMLEAG 315 (393)
T ss_dssp HTTCEEEECCCCCCH
T ss_pred HcCCeEEecCCcccH
Confidence 999999887666543
No 150
>1q7z_A 5-methyltetrahydrofolate S-homocysteine methyltransferase; methionine, cobalamin, vitamin B12; 1.70A {Thermotoga maritima} SCOP: c.1.21.2 c.1.26.1 PDB: 1q7q_A 1q7m_A 1q85_A 1q8a_A 1q8j_A* 3bof_A 3bol_A
Probab=23.97 E-value=3.2e+02 Score=25.80 Aligned_cols=96 Identities=14% Similarity=0.077 Sum_probs=58.4
Q ss_pred CHHHHHHHHHHHHhhcCCCcccEEEEecCCCC-CCcHHHHHHHHHHHHHcCcccEEEecCCCHHHHHHHHHc--CCCeeE
Q 022300 57 TSSIVRESIDVSRRRMDVPCLDMLQFHWWDYS-NPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN--GIPVVS 133 (299)
Q Consensus 57 ~~~~i~~~ve~SL~~Lg~d~iDl~~lH~pd~~-~~~~~~~~~~L~~l~~~Gkir~iGvs~~~~~~l~~~~~~--~~~~~~ 133 (299)
+.+.+.+..++.. .-|.|.||+- |+.. .+..++.-+.+..+++.-. .-|.+-++.++.++++++. |.++ +
T Consensus 338 ~~~~a~~~A~~~v-~~GAdiIDIg----pg~~~v~~~ee~~rvv~~i~~~~~-vpisIDT~~~~v~eaal~~~~G~~i-I 410 (566)
T 1q7z_A 338 NEEIVIKEAKTQV-EKGAEVLDVN----FGIESQIDVRYVEKIVQTLPYVSN-VPLSLDIQNVDLTERALRAYPGRSL-F 410 (566)
T ss_dssp CCHHHHHHHHHHH-HTTCSEEEEE----CSSGGGSCHHHHHHHHHHHHHHTC-SCEEEECCCHHHHHHHHHHCSSCCE-E
T ss_pred CHHHHHHHHHHHH-HCCCCEEEEC----CCCCCCCHHHHHHHHHHHHHhhCC-ceEEEeCCCHHHHHHHHHhcCCCCE-E
Confidence 3455555444443 5799999998 4322 2213333333434433311 2477889999999999987 5433 3
Q ss_pred eeecccccccChh--hHHHHHHHHhCCeEEEcc
Q 022300 134 NQVQHSVVDMRPQ--QKMAELCQLTGVKLITYG 164 (299)
Q Consensus 134 ~q~~~n~~~~~~~--~~~~~~~~~~gi~v~~~~ 164 (299)
|-+.- .+ + .++++.+++.|..++.+.
T Consensus 411 Ndis~--~~---~~~~~~~~~~~~~g~~vV~m~ 438 (566)
T 1q7z_A 411 NSAKV--DE---EELEMKINLLKKYGGTLIVLL 438 (566)
T ss_dssp EEEES--CH---HHHHHHHHHHHHHCCEEEEES
T ss_pred EECCc--ch---hhHHHHHHHHHHhCCeEEEEe
Confidence 33322 11 3 478999999999999974
No 151
>2lr8_A CAsp8-associated protein 2; structural genomics, northeast structural genomics consortiu PSI-biology, apoptosis; NMR {Homo sapiens}
Probab=29.75 E-value=16 Score=24.26 Aligned_cols=18 Identities=17% Similarity=0.158 Sum_probs=11.9
Q ss_pred cccChhhHHHHHHHHhCC
Q 022300 141 VDMRPQQKMAELCQLTGV 158 (299)
Q Consensus 141 ~~~~~~~~~~~~~~~~gi 158 (299)
+.++.++.++..|++.|-
T Consensus 17 WTReeDR~IL~~cq~~G~ 34 (70)
T 2lr8_A 17 WTRNDDRVILLECQKRGP 34 (70)
Confidence 345556667778887774
No 152
>1i1w_A Endo-1,4-beta-xylanase; xylan degradation, hydrolase, glycosidase, enzyme, ultra HIG resolution, cryo temperature, 1; HET: PCA; 0.89A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1i1x_A* 2bnj_A* 1gok_A 1gom_A 1goo_A 1goq_A* 1gor_A* 1k6a_A 3o2l_A 3nyd_A* 1tux_A 1b31_A 1b30_A 1b3v_A* 1b3w_A* 1b3x_A* 1b3y_A* 1b3z_A* 1bg4_A
Probab=23.90 E-value=3.4e+02 Score=23.10 Aligned_cols=73 Identities=12% Similarity=0.195 Sum_probs=45.7
Q ss_pred HHHHHHHHHHHHHcCc-ccEEEecCC----CHHHHHHHHHc----CC-CeeEeeecccccccCh--hhHHHHHHHHhC--
Q 022300 92 YLDALNHLTDLKEEGK-IKTVALTNF----DTERLRIILEN----GI-PVVSNQVQHSVVDMRP--QQKMAELCQLTG-- 157 (299)
Q Consensus 92 ~~~~~~~L~~l~~~Gk-ir~iGvs~~----~~~~l~~~~~~----~~-~~~~~q~~~n~~~~~~--~~~~~~~~~~~g-- 157 (299)
....++.+..|++.|. |..||+-.| .++.+...++. |. ++.+..+...- ... -..+++.|.++.
T Consensus 184 ~~~~~~~v~~l~~~G~~iDgiG~Q~H~~~~~~~~~~~~l~~~a~~G~~pi~iTEldi~~--~qa~~y~~~~~~~~~~~~v 261 (303)
T 1i1w_A 184 TQAIVNRVKKWRAAGVPIDGIGSQTHLSAGQGASVLQALPLLASAGTPEVAITELDVAG--ASSTDYVNVVNACLNVSSC 261 (303)
T ss_dssp HHHHHHHHHHHHHTTCCCCEEEECCEECTTTHHHHHHHHHHHHTTCCSEEEEEEEEETT--CCHHHHHHHHHHHHHCTTE
T ss_pred HHHHHHHHHHHHHCCCcccEEEeccccCCCCHHHHHHHHHHHHHCCCCeEEEEeCCccc--hHHHHHHHHHHHHHhCCCc
Confidence 3467788888999987 899998543 34555555544 55 55544444431 222 235788888875
Q ss_pred CeEEEcccc
Q 022300 158 VKLITYGTV 166 (299)
Q Consensus 158 i~v~~~~pl 166 (299)
++|+-|..-
T Consensus 262 ~git~Wg~~ 270 (303)
T 1i1w_A 262 VGITVWGVA 270 (303)
T ss_dssp EEEEESCSB
T ss_pred eEEEEEcCC
Confidence 677777544
No 153
>2zc8_A N-acylamino acid racemase; octamer, TIM beta/alpha-barrel, metal-binding, metal binding; 1.95A {Thermus thermophilus}
Probab=23.85 E-value=76 Score=27.99 Aligned_cols=71 Identities=15% Similarity=0.089 Sum_probs=44.5
Q ss_pred HHHHHHHHHcCccc-EEEecCCCHHHHHHHHHcCCCeeEeeecccccc-cChhhHHHHHHHHhCCeEEEccccc
Q 022300 96 LNHLTDLKEEGKIK-TVALTNFDTERLRIILENGIPVVSNQVQHSVVD-MRPQQKMAELCQLTGVKLITYGTVM 167 (299)
Q Consensus 96 ~~~L~~l~~~Gkir-~iGvs~~~~~~l~~~~~~~~~~~~~q~~~n~~~-~~~~~~~~~~~~~~gi~v~~~~pl~ 167 (299)
++.+.+++++-.|. ..|=+-++.+.++.+++. ...+++|+-.+-.- -..-..+.+.|+++|+.++...-+.
T Consensus 221 ~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~-~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~~e 293 (369)
T 2zc8_A 221 LLDHAKLQRELSTPICLDESLTGAEKARKAIEL-GAGRVFNVKPARLGGHGESLRVHALAESAGIPLWMGGMLE 293 (369)
T ss_dssp SHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHH-TCCSEEEECHHHHTSHHHHHHHHHHHHHTTCCEEECCCCC
T ss_pred HHHHHHHHhhCCCCEEEcCccCCHHHHHHHHHh-CCCCEEEEchhhhCCHHHHHHHHHHHHHcCCcEEecCccc
Confidence 44566666654443 334445678888888876 34677777665421 1123568999999999965544343
No 154
>2chr_A Chloromuconate cycloisomerase; 3.00A {Cupriavidus necator} SCOP: c.1.11.2 d.54.1.1
Probab=23.60 E-value=1.3e+02 Score=26.36 Aligned_cols=73 Identities=10% Similarity=0.036 Sum_probs=47.5
Q ss_pred HHHHHHHHHcCccc-EEEecCCCHHHHHHHHHcCCCeeEeeeccccccc-ChhhHHHHHHHHhCCeEEEccccccc
Q 022300 96 LNHLTDLKEEGKIK-TVALTNFDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAELCQLTGVKLITYGTVMGG 169 (299)
Q Consensus 96 ~~~L~~l~~~Gkir-~iGvs~~~~~~l~~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~~~gi~v~~~~pl~~G 169 (299)
++.+.+|++.-.|. +.|=+-++...+..+++. ..++++|+...-+-. ..-..+...|+++|+.++..+.+.++
T Consensus 228 ~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~~-~a~d~i~~d~~~~GGit~~~~ia~~A~~~gi~~~~~~~~~~~ 302 (370)
T 2chr_A 228 TQALRRLSDNNRVAIMADESLSTLASAFDLARD-RSVDVFSLKLCNMGGVSATQKIAAVAEASGIASYGGTMLDST 302 (370)
T ss_dssp HHHHHHHHHHCSSEEEESSSCCSHHHHHHHHTT-TCCSEECCCHHHHTSHHHHHHHHHHHHHHTCEECCCCCSCCH
T ss_pred hhhhhHHhhhccCCccCCccCCCHHHHHHHHHc-CCCcEEEeCCcccCCHHHHHHHHHHHHHcCCeEEeCCCcccH
Confidence 45666676665443 455566778888888775 346777766553211 12356899999999999877666554
No 155
>1y7y_A C.AHDI; helix-turn-helix, DNA-binding protein, transcriptional regulator, transcription regulator; 1.69A {Aeromonas hydrophila} SCOP: a.35.1.3
Probab=23.45 E-value=39 Score=21.54 Aligned_cols=23 Identities=22% Similarity=0.284 Sum_probs=16.5
Q ss_pred HHHHHHHHHHHhCCCHHHHHHHH
Q 022300 213 LLQTLKRIASKHGVSIPVVAVRY 235 (299)
Q Consensus 213 ~~~~l~~la~~~~~s~aq~al~~ 235 (299)
+.+.++.+-.+.|+|..++|-+-
T Consensus 14 ~~~~l~~~r~~~g~s~~~lA~~~ 36 (74)
T 1y7y_A 14 FGQRLRELRTAKGLSQETLAFLS 36 (74)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHH
Confidence 34667777778888888777554
No 156
>3emz_A Xylanase, endo-1,4-beta-xylanase; (alpha/beta)8 barrel, GH10 enzyme complex, hydrolase; HET: HXH; 2.08A {Bacillus SP} SCOP: c.1.8.3 PDB: 3emq_A* 3emc_A*
Probab=23.44 E-value=2.2e+02 Score=24.80 Aligned_cols=76 Identities=12% Similarity=0.246 Sum_probs=47.7
Q ss_pred HHHHHHHHHHHHcCc-ccEEEecCC------CHHHHHHHHHc----CCCeeEeeeccccccc----------C-------
Q 022300 93 LDALNHLTDLKEEGK-IKTVALTNF------DTERLRIILEN----GIPVVSNQVQHSVVDM----------R------- 144 (299)
Q Consensus 93 ~~~~~~L~~l~~~Gk-ir~iGvs~~------~~~~l~~~~~~----~~~~~~~q~~~n~~~~----------~------- 144 (299)
...++.+..|+++|. |..||+=.| +.+.+...++. |.++.+-.+..+.... .
T Consensus 187 ~~~~~~v~~l~~~GvpidgiG~Q~H~~~~~p~~~~~~~~l~~~a~lGl~v~iTElDi~~~~~~~~~~~~~~~t~~~~~~Q 266 (331)
T 3emz_A 187 EKIYNLVRSLLDQGAPVHGIGMQGHWNIHGPSMDEIRQAIERYASLDVQLHVTELDLSVFRHEDQRTDLTEPTAEMAELQ 266 (331)
T ss_dssp HHHHHHHHHHHHHTCCCCEEEECCEEETTBSCHHHHHHHHHHHHTTSCEEEEEEEEEESSCTTCCCCCCSSCCHHHHHHH
T ss_pred HHHHHHHHHHHHCCCccceEEECceecCCCCCHHHHHHHHHHHHHcCCcEEEeecccCCccccccccccCCCCHHHHHHH
Confidence 467888999999996 999997654 45666666554 6665555544443210 0
Q ss_pred --hhhHHHHHHHHh--CC-eEEEcccccc
Q 022300 145 --PQQKMAELCQLT--GV-KLITYGTVMG 168 (299)
Q Consensus 145 --~~~~~~~~~~~~--gi-~v~~~~pl~~ 168 (299)
.-..+++.|.++ .| +|+.|+.-.+
T Consensus 267 a~~y~~~~~~~~~~~~~v~giT~WG~~D~ 295 (331)
T 3emz_A 267 QKRYEDIFGLFREYRSNITSVTFWGVADN 295 (331)
T ss_dssp HHHHHHHHHHHHHTTTTEEEEEESSSSTT
T ss_pred HHHHHHHHHHHHhcCCCeeEEEEECCCCC
Confidence 023578888885 34 6777754433
No 157
>2c4w_A 3-dehydroquinate dehydratase; 3-dehydroquinase, shikimate pathway, aromatic amino acid biosynthesis, lyase, sulphonamide; HET: GAJ; 1.55A {Helicobacter pylori} PDB: 2c57_A* 2xda_A* 1j2y_A* 2wks_A* 2xb9_A* 2c4v_A* 2xd9_A*
Probab=23.12 E-value=2.2e+02 Score=22.52 Aligned_cols=80 Identities=11% Similarity=0.107 Sum_probs=56.4
Q ss_pred CCCHHHHHHHHHHHHh--hcCCCcccEEEEecCCCCCCcHHHHHHHHHHHHHc---CcccEEEecCCCHHHHHHHHHcCC
Q 022300 55 KMTSSIVRESIDVSRR--RMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEE---GKIKTVALTNFDTERLRIILENGI 129 (299)
Q Consensus 55 ~~~~~~i~~~ve~SL~--~Lg~d~iDl~~lH~pd~~~~~~~~~~~~L~~l~~~---Gkir~iGvs~~~~~~l~~~~~~~~ 129 (299)
..+.+.|.+.+.+.-+ .+|+ .++.++--. -.++++.+.+...+ |-|-.=|.-+|+.-.++.++.. +
T Consensus 33 ~~Tl~di~~~l~~~a~~~~~g~-~l~~~QSN~-------EGeLId~Ih~a~~~~~dgIIINpgAyTHtSvAlrDAl~~-v 103 (176)
T 2c4w_A 33 MVTLDQIHEIMQTFVKQGNLDV-ELEFFQTNF-------EGEIIDKIQESVGSEYEGIIINPGAFSHTSIAIADAIML-A 103 (176)
T ss_dssp SCCHHHHHHHHHHHHHHTTCCE-EEEEEECSC-------HHHHHHHHHHHHSSSCCEEEEECGGGGGTCHHHHHHHHT-S
T ss_pred cCCHHHHHHHHHHHhccccCCC-EEEEEeeCc-------HHHHHHHHHHhccCCeeEEEECcchhccchHHHHHHHHh-C
Confidence 4578999999999888 8886 455554322 35778888888665 5566666668888888888776 5
Q ss_pred CeeEeeeccccccc
Q 022300 130 PVVSNQVQHSVVDM 143 (299)
Q Consensus 130 ~~~~~q~~~n~~~~ 143 (299)
..-++.++++-.+.
T Consensus 104 ~~P~VEVHiSNi~a 117 (176)
T 2c4w_A 104 GKPVIEVHLTNIQA 117 (176)
T ss_dssp SSCEEEEESSCGGG
T ss_pred CCCEEEEEecCccc
Confidence 56667778776553
No 158
>3h0g_D DNA-directed RNA polymerase II subunit RPB4; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=23.11 E-value=1.7e+02 Score=21.95 Aligned_cols=58 Identities=12% Similarity=0.055 Sum_probs=40.8
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHhCCCCceeeeccCCCCHHHHHHhHhhhcCCCCHHHHHHHHHHHhcCCCC
Q 022300 216 TLKRIASKHGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKKGKDL 286 (299)
Q Consensus 216 ~l~~la~~~~~s~aq~al~~~l~~~~v~~~i~g~~~~~~e~l~enl~a~~~~Lt~e~~~~i~~~~~~~~~~ 286 (299)
.+.++-.. +.+..++|. +.+. .+. ++++++..+..++.++++++++.|-+...+.+++
T Consensus 76 ~v~~lL~~-~L~~fEia~--L~NL--------~P~--t~dEak~LIpsL~~r~~de~L~~IL~~l~~~r~f 133 (135)
T 3h0g_D 76 ACERILGN-RFHKFERAQ--LGTL--------CCE--DAEEARTLIPSLANKIDDQNLQGILDELSTLRKF 133 (135)
T ss_dssp HHHHHCCC-CSCHHHHHH--HHHH--------CCC--CHHHHHHHCGGGTTTSCSHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHh-cCCHHHHHH--HccC--------CCC--CHHHHHHHHHHhcccCCHHHHHHHHHHHHHHhcc
Confidence 33333333 778877765 2221 245 8999999999887779999999998777776654
No 159
>3obe_A Sugar phosphate isomerase/epimerase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=23.11 E-value=3.2e+02 Score=22.94 Aligned_cols=17 Identities=18% Similarity=0.274 Sum_probs=14.2
Q ss_pred hHHHHHHHHhCCeEEEc
Q 022300 147 QKMAELCQLTGVKLITY 163 (299)
Q Consensus 147 ~~~~~~~~~~gi~v~~~ 163 (299)
...++.|++.|+..+..
T Consensus 117 ~~~i~~A~~lG~~~v~~ 133 (305)
T 3obe_A 117 KKATDIHAELGVSCMVQ 133 (305)
T ss_dssp HHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHcCCCEEEe
Confidence 45789999999988884
No 160
>4e5v_A Putative THUA-like protein; THUA-like proteins, trehalose utilisation, structural genomi center for structural genomics, JCSG; 1.75A {Parabacteroides merdae}
Probab=23.02 E-value=3.4e+02 Score=22.89 Aligned_cols=66 Identities=5% Similarity=-0.001 Sum_probs=44.3
Q ss_pred cEEEEecccCCCCCCCHHHHHHHHHHHHhhcC----------------------CCcccEEEEecCCCCCCcHHHHHHHH
Q 022300 42 SWISLTKWVPPPVKMTSSIVRESIDVSRRRMD----------------------VPCLDMLQFHWWDYSNPGYLDALNHL 99 (299)
Q Consensus 42 ~i~I~tK~~~~~~~~~~~~i~~~ve~SL~~Lg----------------------~d~iDl~~lH~pd~~~~~~~~~~~~L 99 (299)
++.|.++.. .++.+.....+.+.|+..| ++..|++.+.. ..... .++..++|
T Consensus 6 kvLiv~G~~----~H~~~~~~~~l~~~l~~~g~f~V~~~~d~~~~~d~~~f~~~L~~~D~vV~~~-~~~~l-~~~~~~~l 79 (281)
T 4e5v_A 6 KTLLITGQN----NHNWQVSHVVLKQILENSGRFDVDFVISPEQGKDMSGFVLDFSPYQLVVLDY-NGDSW-PEETNRRF 79 (281)
T ss_dssp EEEEEESCC----SSCHHHHHHHHHHHHHHTTSEEEEEEECCCTTSCCTTCCCCCTTCSEEEECC-CSSCC-CHHHHHHH
T ss_pred EEEEEcCCC----CCChHHHHHHHHHHHHhcCCEEEEEEeCCccccchhHHhhhhhcCCEEEEeC-CCCcC-CHHHHHHH
Confidence 566666653 2347777788888887666 34577777433 22222 46899999
Q ss_pred HHHHHcCcccEEEec
Q 022300 100 TDLKEEGKIKTVALT 114 (299)
Q Consensus 100 ~~l~~~Gkir~iGvs 114 (299)
++.+++|. ..+|+-
T Consensus 80 ~~yV~~Gg-glv~~H 93 (281)
T 4e5v_A 80 LEYVQNGG-GVVIYH 93 (281)
T ss_dssp HHHHHTTC-EEEEEG
T ss_pred HHHHHcCC-CEEEEe
Confidence 99999995 667764
No 161
>1n82_A Xylanase, intra-cellular xylanase; hydrolase; 1.45A {Geobacillus stearothermophilus} SCOP: c.1.8.3 PDB: 3mua_A* 2q8x_A* 3msd_A* 3msg_A* 3mui_A* 3ms8_A
Probab=22.68 E-value=2.1e+02 Score=24.80 Aligned_cols=73 Identities=12% Similarity=0.312 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHHcCc-ccEEEecCC------CHHHHHHHHHc----CCCeeEeeeccccccc-----------------C
Q 022300 93 LDALNHLTDLKEEGK-IKTVALTNF------DTERLRIILEN----GIPVVSNQVQHSVVDM-----------------R 144 (299)
Q Consensus 93 ~~~~~~L~~l~~~Gk-ir~iGvs~~------~~~~l~~~~~~----~~~~~~~q~~~n~~~~-----------------~ 144 (299)
...++.+..|+++|. |..||+-.| +.+.+.+.++. |.++.+-.+....... .
T Consensus 188 ~~~~~~v~~l~~~g~~idgiG~Q~H~~~~~~~~~~~~~~l~~~a~~G~pi~iTEldi~~~~~~~~~~~~~~~~~~~~~~q 267 (331)
T 1n82_A 188 EKIFALVKSLRDKGIPIHGIGMQAHWSLTRPSLDEIRAAIERYASLGVVLHITELDVSMFEFHDRRTDLAAPTSEMIERQ 267 (331)
T ss_dssp HHHHHHHHHHHHTTCCCCEEEECCEEESSSSCHHHHHHHHHHHHTTTCEEEEEEEEEESSCTTCCCCCCSSCCHHHHHHH
T ss_pred HHHHHHHHHHHHCCCccceEEeceecCCCCCCHHHHHHHHHHHHhcCCeEEEEeceecCCCCcccccccCCCCHHHHHHH
Confidence 456788888999997 889998544 46667666654 5555554444433210 0
Q ss_pred --hhhHHHHHHHHhC--Ce-EEEccc
Q 022300 145 --PQQKMAELCQLTG--VK-LITYGT 165 (299)
Q Consensus 145 --~~~~~~~~~~~~g--i~-v~~~~p 165 (299)
.-..+++.|.++. |+ |+-|+-
T Consensus 268 A~~~~~~~~~~~~~~~~v~git~Wg~ 293 (331)
T 1n82_A 268 AERYGQIFALFKEYRDVIQSVTFWGI 293 (331)
T ss_dssp HHHHHHHHHHHHHTTTTEEEEEESCS
T ss_pred HHHHHHHHHHHHhCcCcccEEEEECC
Confidence 0135788888876 55 555643
No 162
>2ewt_A BLDD, putative DNA-binding protein; the DNA-binding domain of BLDD; 1.81A {Streptomyces coelicolor}
Probab=22.60 E-value=39 Score=21.38 Aligned_cols=22 Identities=27% Similarity=0.401 Sum_probs=15.7
Q ss_pred HHHHHHHHHHHhCCCHHHHHHH
Q 022300 213 LLQTLKRIASKHGVSIPVVAVR 234 (299)
Q Consensus 213 ~~~~l~~la~~~~~s~aq~al~ 234 (299)
....++.+-++.|+|..++|-.
T Consensus 9 ~g~~l~~~r~~~glsq~~lA~~ 30 (71)
T 2ewt_A 9 LGAKLRAIRTQQGLSLHGVEEK 30 (71)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHH
Confidence 3466777777788888777654
No 163
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=22.56 E-value=2.9e+02 Score=22.78 Aligned_cols=57 Identities=14% Similarity=0.220 Sum_probs=37.8
Q ss_pred HHHHHHHHHc--CcccEEEec-CCCHHHHHHHHHcCCCeeEeeecccccccChhhHHHHHHHHhCCeEEE
Q 022300 96 LNHLTDLKEE--GKIKTVALT-NFDTERLRIILENGIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLIT 162 (299)
Q Consensus 96 ~~~L~~l~~~--Gkir~iGvs-~~~~~~l~~~~~~~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~~ 162 (299)
.+.+++++++ +. .+|.. -.+.++++.+++.|-.|.+. .....+++++|++.|+.+++
T Consensus 73 ~e~I~~l~~~~~~~--~iGaGTVlt~~~a~~Ai~AGA~fIvs--------P~~~~~vi~~~~~~gi~~ip 132 (232)
T 4e38_A 73 VEAIRLLRQAQPEM--LIGAGTILNGEQALAAKEAGATFVVS--------PGFNPNTVRACQEIGIDIVP 132 (232)
T ss_dssp HHHHHHHHHHCTTC--EEEEECCCSHHHHHHHHHHTCSEEEC--------SSCCHHHHHHHHHHTCEEEC
T ss_pred HHHHHHHHHhCCCC--EEeECCcCCHHHHHHHHHcCCCEEEe--------CCCCHHHHHHHHHcCCCEEc
Confidence 3444444543 33 44543 45789999999987776642 22345799999999988876
No 164
>2vws_A YFAU, 2-keto-3-deoxy sugar aldolase; lyase, escherichia coli K-12 protein YFAU, 2-keto-3-deoxy SU aldolase, degradation of homoprotocatechuate; 1.39A {Escherichia coli} PDB: 2vwt_A
Probab=22.56 E-value=3.4e+02 Score=22.64 Aligned_cols=67 Identities=7% Similarity=0.043 Sum_probs=38.7
Q ss_pred HHHHHHcCccc-EEEecCCCHHHHHHHHHcCCCeeEeeecccccccChhhHHHHHHHHhCCeEEEccc
Q 022300 99 LTDLKEEGKIK-TVALTNFDTERLRIILENGIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYGT 165 (299)
Q Consensus 99 L~~l~~~Gkir-~iGvs~~~~~~l~~~~~~~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~~~~p 165 (299)
|.+..++|+.. ..-+..-+++.++++...|.++.++-.+..+.+...-...+..+...|..++.+.+
T Consensus 9 ~k~~l~~g~~~~g~~~~~~~p~~~e~a~~~GaD~v~lDlE~~~~~~~~~~~~~~a~~~~~~~~~VRv~ 76 (267)
T 2vws_A 9 FKERLRKGEVQIGLWLSSTTAYMAEIAATSGYDWLLIDGEHAPNTIQDLYHQLQAVAPYASQPVIRPV 76 (267)
T ss_dssp HHHHHHTTCCEEEEEECSCCHHHHHHHHTTCCSEEEEETTTSCCCHHHHHHHHHHHTTSSSEEEEECS
T ss_pred HHHHHHCCCCEEEEEEeCCCHHHHHHHHhCCCCEEEEcCCCCCCCHHHHHHHHHHHHhCCCcEEEEeC
Confidence 33444567722 22223337788888877788888888888876543323334444434555666543
No 165
>1nsj_A PRAI, phosphoribosyl anthranilate isomerase; thermostability; 2.00A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1lbm_A 1dl3_A
Probab=22.55 E-value=1.4e+02 Score=24.06 Aligned_cols=74 Identities=7% Similarity=-0.037 Sum_probs=45.3
Q ss_pred CHHHHHHHHHHHHhhcCCCcccEEEEecCCCCCCcHHHHHHHHHHHHHcCcccEEEec-CCCHHHHHHHHHcCCCeeEee
Q 022300 57 TSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALT-NFDTERLRIILENGIPVVSNQ 135 (299)
Q Consensus 57 ~~~~i~~~ve~SL~~Lg~d~iDl~~lH~pd~~~~~~~~~~~~L~~l~~~Gkir~iGvs-~~~~~~l~~~~~~~~~~~~~q 135 (299)
+++.++.+. .+|.||+=+.+. -+.+..- ..+....|.... ...+..+||- |-+.+.+.++.+. ..++++|
T Consensus 11 ~~eda~~a~-----~~GaD~iGfif~-~~SpR~V-~~~~a~~i~~~~-~~~~~~VgVfvn~~~~~i~~~~~~-~~ld~vQ 81 (205)
T 1nsj_A 11 NLEDALFSV-----ESGADAVGFVFY-PKSKRYI-SPEDARRISVEL-PPFVFRVGVFVNEEPEKILDVASY-VQLNAVQ 81 (205)
T ss_dssp SHHHHHHHH-----HHTCSEEEEECC-TTCTTBC-CHHHHHHHHHHS-CSSSEEEEEESSCCHHHHHHHHHH-HTCSEEE
T ss_pred cHHHHHHHH-----HcCCCEEEEEec-CCCCCcC-CHHHHHHHHHhC-CCCCCEEEEEeCCCHHHHHHHHHh-hCCCEEE
Confidence 456665544 579999887742 2222222 123333333222 2468899986 6788888888775 5689999
Q ss_pred eccc
Q 022300 136 VQHS 139 (299)
Q Consensus 136 ~~~n 139 (299)
++-+
T Consensus 82 LHG~ 85 (205)
T 1nsj_A 82 LHGE 85 (205)
T ss_dssp ECSC
T ss_pred ECCC
Confidence 9743
No 166
>3k94_A Thiamin pyrophosphokinase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.10A {Geobacillus thermodenitrificans}
Probab=22.50 E-value=1.2e+02 Score=24.87 Aligned_cols=39 Identities=15% Similarity=0.230 Sum_probs=34.2
Q ss_pred CCHHHHHHHHHHhCCCCceeeeccCCCCHHHHHHhHhhh
Q 022300 226 VSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIF 264 (299)
Q Consensus 226 ~s~aq~al~~~l~~~~v~~~i~g~~~~~~e~l~enl~a~ 264 (299)
.|-.++||+|++.++.-..+++|+.-.+.+|.-.|+..+
T Consensus 78 ~TD~e~Al~~a~~~g~~~I~i~Ga~GGR~DH~lani~lL 116 (223)
T 3k94_A 78 KTDMEIALDWAVEQTARCIRLFGATGGRLDHLFGNVELL 116 (223)
T ss_dssp BCHHHHHHHHHHTTCCSEEEEESCSSSSHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHcCCCEEEEEcCCCCchhHHHHHHHHH
Confidence 477899999999998888889999888999999998765
No 167
>2d1z_A Endo-1,4-beta-D-xylanase; TIM-barrel, retaining enzyme, catalytic-site mutant, chemica hydrolase; 1.60A {Streptomyces olivaceoviridis} PDB: 2d20_A* 2d22_A 2d23_A 2d24_A* 1xyf_A 1isw_A* 1isx_A* 1isy_A* 1isv_A* 1it0_A* 1v6u_A* 1v6v_A* 1v6w_A* 1v6x_A* 1isz_A
Probab=22.47 E-value=1e+02 Score=27.99 Aligned_cols=74 Identities=18% Similarity=0.319 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHHcCc-ccEEEecCC------CHHHHHHHHHc----CCCeeEeeecccccccChhhHHHHHHHHhC--Ce
Q 022300 93 LDALNHLTDLKEEGK-IKTVALTNF------DTERLRIILEN----GIPVVSNQVQHSVVDMRPQQKMAELCQLTG--VK 159 (299)
Q Consensus 93 ~~~~~~L~~l~~~Gk-ir~iGvs~~------~~~~l~~~~~~----~~~~~~~q~~~n~~~~~~~~~~~~~~~~~g--i~ 159 (299)
+..++.++.|+++|. |..||+..| +++.+...++. +.++.+..+.+.-........+++.|.++. ++
T Consensus 183 ~~~~~~v~~l~~~g~~iDgiG~q~H~~~~~~~~~~~~~~l~~~a~~g~~v~iTEldv~~~qa~~y~~~~~~~~~~~~~~g 262 (436)
T 2d1z_A 183 QGVYNMVRDFKQRGVPIDCVGFQSHFNSGSPYNSNFRTTLQNFAALGVDVAITELDIQGASSSTYAAVTNDCLAVSRCLG 262 (436)
T ss_dssp HHHHHHHHHHHHHTCCCCEEEECCEEBTTBCCCTTHHHHHHHHHTTTCEEEEEEEEETTCCHHHHHHHHHHHHTCTTEEE
T ss_pred HHHHHHHHHHHhCCCcccEEEEeeEEcCCCCCHHHHHHHHHHHHHcCCeEEEeecchhHHHHHHHHHHHHHHHhcCCceE
Confidence 466777888888887 899999655 23444444433 555555555444111111245788888775 66
Q ss_pred EEEcccc
Q 022300 160 LITYGTV 166 (299)
Q Consensus 160 v~~~~pl 166 (299)
|+-|..-
T Consensus 263 vt~Wg~~ 269 (436)
T 2d1z_A 263 ITVWGVR 269 (436)
T ss_dssp EEESCSB
T ss_pred EEecccc
Confidence 7777543
No 168
>3no3_A Glycerophosphodiester phosphodiesterase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.89A {Parabacteroides distasonis} SCOP: c.1.18.0
Probab=22.38 E-value=1.2e+02 Score=24.82 Aligned_cols=66 Identities=11% Similarity=0.107 Sum_probs=38.8
Q ss_pred HHHHHcCcccEEEecCCCHHHHHHHHHc--CCCeeEeeecc----------cccccCh-----hhHHHHHHHHhCCeEEE
Q 022300 100 TDLKEEGKIKTVALTNFDTERLRIILEN--GIPVVSNQVQH----------SVVDMRP-----QQKMAELCQLTGVKLIT 162 (299)
Q Consensus 100 ~~l~~~Gkir~iGvs~~~~~~l~~~~~~--~~~~~~~q~~~----------n~~~~~~-----~~~~~~~~~~~gi~v~~ 162 (299)
+.+++.|....+=+++|+.+.+..+.+. .++........ ..++... ..++++.++++|+.|.+
T Consensus 122 ~~l~~~~~~~~v~~~Sf~~~~l~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~G~~v~~ 201 (238)
T 3no3_A 122 QMVKRMKLAKRTDYISFNMDACKEFIRLCPKSEVSYLNGELSPMELKELGFTGLDYHYKVLQSHPDWVKDCKVLGMTSNV 201 (238)
T ss_dssp HHHHHTTCGGGEEEEESCHHHHHHHHHHCTTSCEEECSSCSCHHHHHHTTCCEEEEEHHHHHHSTTHHHHHHHTTCEEEE
T ss_pred HHHHHcCCcCCEEEEECCHHHHHHHHHHCCCCeEEEEeCCCCHHHHHHCCCceEeccHHhhhCCHHHHHHHHHCCCEEEE
Confidence 3444556667788888888888877665 22222211110 1011110 13578999999999999
Q ss_pred ccc
Q 022300 163 YGT 165 (299)
Q Consensus 163 ~~p 165 (299)
|..
T Consensus 202 WTV 204 (238)
T 3no3_A 202 WTV 204 (238)
T ss_dssp ECC
T ss_pred ECC
Confidence 953
No 169
>2uyg_A 3-dehydroquinate dehydratase; typeii 3-dehydroquinase, lyase; 2.2A {Thermus thermophilus}
Probab=22.32 E-value=2.4e+02 Score=21.62 Aligned_cols=80 Identities=8% Similarity=0.030 Sum_probs=57.0
Q ss_pred CCCHHHHHHHHHHHHhhcCCCcccEEEEecCCCCCCcHHHHHHHHHHHHHc---CcccEEEecCCCHHHHHHHHHcCCCe
Q 022300 55 KMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEE---GKIKTVALTNFDTERLRIILENGIPV 131 (299)
Q Consensus 55 ~~~~~~i~~~ve~SL~~Lg~d~iDl~~lH~pd~~~~~~~~~~~~L~~l~~~---Gkir~iGvs~~~~~~l~~~~~~~~~~ 131 (299)
..+.+.+.+.+.+.-+.+|+ .++.+|--. -.++++.+.+...+ |-|-.=|.-+|+.-.++.++.. +..
T Consensus 23 ~~tl~di~~~l~~~a~~~g~-~v~~~QSN~-------EgeLId~Ih~a~~~~~dgiIINpgA~THtSvAlrDAl~~-v~~ 93 (149)
T 2uyg_A 23 RTTLEELEALCEAWGAELGL-GVVFRQTNY-------EGQLIEWVQQAHQEGFLAIVLNPGALTHYSYALLDAIRA-QPL 93 (149)
T ss_dssp SCCHHHHHHHHHHHHHHTTC-CEEEEECSC-------HHHHHHHHHHTTTTTCSEEEEECGGGGGTCHHHHHHHHT-SCS
T ss_pred cCCHHHHHHHHHHHHHHcCC-EEEEEeeCC-------HHHHHHHHHHhccCCeeEEEEccchhccccHHHHHHHHh-CCC
Confidence 45789999999999999997 466665322 35777777777654 4455556668888888888776 555
Q ss_pred eEeeeccccccc
Q 022300 132 VSNQVQHSVVDM 143 (299)
Q Consensus 132 ~~~q~~~n~~~~ 143 (299)
-++.++++-.+.
T Consensus 94 P~VEVHiSNi~a 105 (149)
T 2uyg_A 94 PVVEVHLTNLHA 105 (149)
T ss_dssp CEEEEESSCGGG
T ss_pred CEEEEEecCccc
Confidence 667777776544
No 170
>4ggi_A UDP-2,3-diacylglucosamine pyrophosphatase LPXI; structural genomics, PSI-biology; HET: UDG; 2.52A {Caulobacter crescentus} PDB: 4ggm_X*
Probab=22.27 E-value=1.3e+02 Score=25.66 Aligned_cols=46 Identities=9% Similarity=0.117 Sum_probs=37.6
Q ss_pred HHHHHHHHHcCCCeeEeeecccccccChhhHHHHHHHHhCCeEEEccc
Q 022300 118 TERLRIILENGIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYGT 165 (299)
Q Consensus 118 ~~~l~~~~~~~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~~~~p 165 (299)
.+.++.+.+.|+.-.++|-.-+++-+. .+++++|.++||.+++..|
T Consensus 234 ~dti~~~~~ag~~~ivi~~g~si~~~~--~~~i~~a~~~gi~~~~~~~ 279 (283)
T 4ggi_A 234 VATIHRAARAGLAGIVGEAGRLLVVDR--EAVIAAADDLGLFVLGVDP 279 (283)
T ss_dssp HHHHHHHHHTTCCEEEEETTBCEETTH--HHHHHHHHHHTCEEEEECC
T ss_pred HHHHHHHHHcCCeEEEEcCCCcEEeCH--HHHHHHHHHcCCEEEEeCC
Confidence 577888888888888889999985432 4799999999999998765
No 171
>4e2i_2 DNA polymerase alpha subunit B; replication initiation, hydrolase-DNA binding complex, hydro binding protein complex; HET: DNA; 5.00A {Homo sapiens}
Probab=22.26 E-value=93 Score=21.18 Aligned_cols=33 Identities=18% Similarity=0.236 Sum_probs=26.3
Q ss_pred CCHHHHHHhHhhhcCCCCHHHHHHHHHHHhcCC
Q 022300 252 GLAEHIQDTNAIFMLSLDEDDVNSIQEVTKKGK 284 (299)
Q Consensus 252 ~~~e~l~enl~a~~~~Lt~e~~~~i~~~~~~~~ 284 (299)
++.++|.+.++.++..-+++.++++.++-..++
T Consensus 3 vs~e~l~~el~~Fgi~c~d~v~eKl~ElC~~y~ 35 (78)
T 4e2i_2 3 ASAQQLAEELQIFGLDCEEALIEKLVELCVQYG 35 (78)
T ss_dssp CCHHHHHHHHHHTTCCCCHHHHHHHHTHHHHSC
T ss_pred cCHHHHHHHHHHcCCCCcHHHHHHHHHHHHHcC
Confidence 489999999999999888887777776654443
No 172
>3ta6_A Triosephosphate isomerase; HET: FLC; 1.41A {Mycobacterium tuberculosis} SCOP: c.1.1.0 PDB: 3tao_A* 3gvg_A
Probab=21.96 E-value=1.6e+02 Score=25.06 Aligned_cols=47 Identities=28% Similarity=0.222 Sum_probs=27.0
Q ss_pred hCCCHHHHHHHHHHhCCCCceeeeccCCCCHHHHHHhHhhhcC-CCCH
Q 022300 224 HGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFML-SLDE 270 (299)
Q Consensus 224 ~~~s~aq~al~~~l~~~~v~~~i~g~~~~~~e~l~enl~a~~~-~Lt~ 270 (299)
||-|...--.+=+++++.|...++|-.|-+++...+.+++... +|+.
T Consensus 215 YGGSV~~~N~~el~~~~diDG~LVGgASL~~~~F~~Ii~~~~~~~~~~ 262 (267)
T 3ta6_A 215 YGGSVNAKNVGDIVAQDDVDGGLVGGASLDGEHFATLAAIAAGGPLPH 262 (267)
T ss_dssp ECSCCCTTTHHHHHTSTTCCEEEECGGGGSHHHHHHHHHHHHC-----
T ss_pred EcCCcCHhHHHHHhcCCCCCEEEechHhcCHHHHHHHHHHHhcCCCCc
Confidence 3334333344556777888888888776666666666665543 5543
No 173
>3qz6_A HPCH/HPAI aldolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.00A {Desulfitobacterium hafniense} SCOP: c.1.12.0
Probab=21.89 E-value=3.5e+02 Score=22.53 Aligned_cols=65 Identities=17% Similarity=0.272 Sum_probs=42.4
Q ss_pred HHHHcCccc-EEEecC-CCHHHHHHHHHcCCCeeEeeecccccccChhhHHHHHHHHhCCeEEEccc
Q 022300 101 DLKEEGKIK-TVALTN-FDTERLRIILENGIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYGT 165 (299)
Q Consensus 101 ~l~~~Gkir-~iGvs~-~~~~~l~~~~~~~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~~~~p 165 (299)
+..++|+.- ..-++. -++..++++...+.++.++-++..+.+.......+..+...|+.++.+-+
T Consensus 8 ~~l~~g~~~~g~~~~~~~~p~~~e~a~~~g~D~vilDlEhav~~~~k~~~~l~a~~~~~~~~~VRVn 74 (261)
T 3qz6_A 8 KKLSAGKSVVGTMLNLVYNPDIVRIYAEAGLDYFIVDCEHAAYTFREINHLVSVAKNAGVSVLVRIP 74 (261)
T ss_dssp HHHHTTCCEEEEEESSCCCTTHHHHHHHTTCSEEEEESSSSCCCHHHHHHHHHHHHHHTCEEEEECS
T ss_pred HHHHCCCCEEEEEEecCCCHHHHHHHhcCCcCEEEEeccCCCCCHHHHHHHHHHHhhcCCeEEEEeC
Confidence 344566542 233445 56888888888788899999999987654444455556666776666533
No 174
>3szu_A ISPH, 4-hydroxy-3-methylbut-2-ENYL diphosphate reductas; 3Fe-4S iron-sulfur cluster, conserved cysteine, IPP and DMAP production final STEP; HET: H6P; 1.40A {Escherichia coli} PDB: 3szl_A* 3f7t_A* 3szo_A* 3t0f_A* 3t0g_A* 3urk_A* 3utc_A* 3utd_A* 3uv3_A* 3uv6_A* 3uv7_A* 3uwm_A* 3ke8_A* 3ke9_A* 3kef_A* 3kel_A 3kem_A*
Probab=21.57 E-value=1.3e+02 Score=26.40 Aligned_cols=108 Identities=10% Similarity=0.127 Sum_probs=65.7
Q ss_pred CcccEEEecCCCHHHHHHHHHc---CCCeeEeeeccccccc---ChhhHHHHHHHHhCCeEEEcccccccccCCcccCCC
Q 022300 106 GKIKTVALTNFDTERLRIILEN---GIPVVSNQVQHSVVDM---RPQQKMAELCQLTGVKLITYGTVMGGLLSEKFLDTN 179 (299)
Q Consensus 106 Gkir~iGvs~~~~~~l~~~~~~---~~~~~~~q~~~n~~~~---~~~~~~~~~~~~~gi~v~~~~pl~~G~L~~~~~~~~ 179 (299)
.++-.+-=.+++.+...++.+. .. +.+.-..+|-+++ +.+..+.++|.+.++-++.-++-.+
T Consensus 171 ~kv~~vsQTT~s~~~~~~iv~~L~~r~-p~i~~~~~ntIC~AT~~RQ~av~~lA~~vD~miVVGg~nSS----------- 238 (328)
T 3szu_A 171 EKLSFMTQTTLSVDDTSDVIDALRKRF-PKIVGPRKDDICYATTNRQEAVRALAEQAEVVLVVGSKNSS----------- 238 (328)
T ss_dssp TSEEEEECTTSCHHHHHHHHHHHHHHC-TTCBCCSSCSCCHHHHHHHHHHHHHHHHCSEEEEECCTTCH-----------
T ss_pred CeEEEEEecCCcHHHHHHHHHHHHHhC-cccccCCCCCcCHHHHHHHHHHHHHHHhCCEEEEeCCCCCc-----------
Confidence 3555555557777776665554 11 1111112444443 2245688888888876665322211
Q ss_pred CCCCCCCCCCCCchhHHHHhhhhhcCCchHHHHHHHHHHHHHHHhCC------CHHHHHHHHHHhCCCCceeeeccCCCC
Q 022300 180 LSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASKHGV------SIPVVAVRYILDQPAVAGSMIGVRLGL 253 (299)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~la~~~~~------s~aq~al~~~l~~~~v~~~i~g~~~~~ 253 (299)
--..|.++|++.|. +..++-..|+-.... ..+..|+| +
T Consensus 239 ---------------------------------NT~rL~eia~~~g~~ty~Ie~~~el~~~wl~g~~~-VGITAGAS--T 282 (328)
T 3szu_A 239 ---------------------------------NSNRLAELAQRMGKRAFLIDDAKDIQEEWVKEVKC-VGVTAGAS--A 282 (328)
T ss_dssp ---------------------------------HHHHHHHHHHHTTCEEEEESSGGGCCHHHHTTCSE-EEEEECTT--C
T ss_pred ---------------------------------hHHHHHHHHHHhCCCEEEeCChHHCCHHHhCCCCE-EEEeecCC--C
Confidence 02789999999885 678899999965443 34678999 9
Q ss_pred HHHHHHhH
Q 022300 254 AEHIQDTN 261 (299)
Q Consensus 254 ~e~l~enl 261 (299)
|+.|-+.+
T Consensus 283 P~~lieeV 290 (328)
T 3szu_A 283 PDILVQNV 290 (328)
T ss_dssp CHHHHHHH
T ss_pred CHHHHHHH
Confidence 99875554
No 175
>1t57_A Conserved protein MTH1675; structural genomics, FMN; HET: FMN; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.49.1.2
Probab=21.47 E-value=3.3e+02 Score=22.07 Aligned_cols=88 Identities=13% Similarity=0.114 Sum_probs=56.2
Q ss_pred EEEEecCCCCCCcHHHHHHHHHHHHHcCcccEEEecCCCHHHHHHHHHcCC--CeeEeeecccc---cccChhhHHHHHH
Q 022300 79 MLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILENGI--PVVSNQVQHSV---VDMRPQQKMAELC 153 (299)
Q Consensus 79 l~~lH~pd~~~~~~~~~~~~L~~l~~~Gkir~iGvs~~~~~~l~~~~~~~~--~~~~~q~~~n~---~~~~~~~~~~~~~ 153 (299)
++|+-.|.... .+++++...+--++.-|++|=|.+-+.+...++++. . .+.++-..+.. -..+...+..+..
T Consensus 25 i~YF~~~G~eN--T~~tl~la~era~e~~Ik~iVVASssG~TA~k~~e~-~~~~lVvVTh~~GF~~pg~~e~~~e~~~~L 101 (206)
T 1t57_A 25 ICYFEEPGKEN--TERVLELVGERADQLGIRNFVVASVSGETALRLSEM-VEGNIVSVTHHAGFREKGQLELEDEARDAL 101 (206)
T ss_dssp EEEESSCSGGG--HHHHHHHHHHHHHHHTCCEEEEECSSSHHHHHHHTT-CCSEEEEECCCTTSSSTTCCSSCHHHHHHH
T ss_pred EEEecCCCccc--HHHHHHHHHHHHHHcCCCEEEEEeCCCHHHHHHHHH-ccCCEEEEeCcCCCCCCCCCcCCHHHHHHH
Confidence 45665554332 456666555555555699999999999888888875 2 34433333221 1223356789999
Q ss_pred HHhCCeEEEccccccc
Q 022300 154 QLTGVKLITYGTVMGG 169 (299)
Q Consensus 154 ~~~gi~v~~~~pl~~G 169 (299)
++.|+.|+.-+-+..|
T Consensus 102 ~~~G~~V~t~tH~lsG 117 (206)
T 1t57_A 102 LERGVNVYAGSHALSG 117 (206)
T ss_dssp HHHTCEEECCSCTTTT
T ss_pred HhCCCEEEEeeccccc
Confidence 9999999886555444
No 176
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=21.46 E-value=4.3e+02 Score=23.39 Aligned_cols=100 Identities=9% Similarity=0.037 Sum_probs=58.2
Q ss_pred CCCHHHHHHHHHHHHhhcCCCcccEEEEecCCCCCCcHHHHHHHHHHHHHcCc-ccEEEecCCCHHHHHHHHHcCCCeeE
Q 022300 55 KMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGK-IKTVALTNFDTERLRIILENGIPVVS 133 (299)
Q Consensus 55 ~~~~~~i~~~ve~SL~~Lg~d~iDl~~lH~pd~~~~~~~~~~~~L~~l~~~Gk-ir~iGvs~~~~~~l~~~~~~~~~~~~ 133 (299)
.++.+...+- -+.|.++|+++|.+-+ |.. .....++++.+.+.|. ++-.+.+....+.++.+.+.+.+..-
T Consensus 21 ~~~~~~k~~i-a~~L~~~Gv~~IE~g~---p~~----~~~~~~~~~~i~~~~~~~~v~~~~r~~~~di~~a~~~g~~~v~ 92 (382)
T 2ztj_A 21 NFSTQDKVEI-AKALDEFGIEYIEVTT---PVA----SPQSRKDAEVLASLGLKAKVVTHIQCRLDAAKVAVETGVQGID 92 (382)
T ss_dssp CCCHHHHHHH-HHHHHHHTCSEEEECC---TTS----CHHHHHHHHHHHTSCCSSEEEEEEESCHHHHHHHHHTTCSEEE
T ss_pred CcCHHHHHHH-HHHHHHcCcCEEEEcC---CcC----CHHHHHHHHHHHhcCCCcEEEEEcccChhhHHHHHHcCCCEEE
Confidence 5666665544 4557889999999843 321 2344567777777663 44444444457778888887655332
Q ss_pred eeecccc-----cccCh------hhHHHHHHHHhC--CeEEE
Q 022300 134 NQVQHSV-----VDMRP------QQKMAELCQLTG--VKLIT 162 (299)
Q Consensus 134 ~q~~~n~-----~~~~~------~~~~~~~~~~~g--i~v~~ 162 (299)
+-...|. +.... -.+.+++++++| +.+..
T Consensus 93 i~~~~s~~~~~~~~~s~~e~l~~~~~~v~~ak~~g~~~~v~~ 134 (382)
T 2ztj_A 93 LLFGTSKYLRAPHGRDIPRIIEEAKEVIAYIREAAPHVEVRF 134 (382)
T ss_dssp EEECC--------CCCHHHHHHHHHHHHHHHHHHCTTSEEEE
T ss_pred EEeccCHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEE
Confidence 2222221 11111 246789999999 76654
No 177
>2a6c_A Helix-turn-helix motif; putative transcriptional regulator, structural genomics, JOI for structural genomics, JCSG; HET: CIT; 1.90A {Nitrosomonas europaea} SCOP: a.35.1.13
Probab=21.11 E-value=51 Score=21.97 Aligned_cols=27 Identities=22% Similarity=0.124 Sum_probs=18.4
Q ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHhC
Q 022300 213 LLQTLKRIASKHGVSIPVVAVRYILDQ 239 (299)
Q Consensus 213 ~~~~l~~la~~~~~s~aq~al~~~l~~ 239 (299)
....++++-++.|+|..++|-+.-+++
T Consensus 19 ~~~~l~~~r~~~glsq~elA~~~gis~ 45 (83)
T 2a6c_A 19 LLIVLQEHLRNSGLTQFKAAELLGVTQ 45 (83)
T ss_dssp HHHHHHHHHHTTTCCHHHHHHHHTSCH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHCcCH
Confidence 346777777888888888776654333
No 178
>3v7e_A Ribosome-associated protein L7AE-like; RNA-protein complex, K-turn, L7AE-like, A member L7AE/L30E superfamily; HET: SAM; 2.80A {Bacillus subtilis}
Probab=21.00 E-value=2e+02 Score=19.32 Aligned_cols=57 Identities=12% Similarity=0.121 Sum_probs=36.0
Q ss_pred HHHHHHcCcccEEEecCCCHHHHHHHHHcC-CCeeEeeecccccccChhhHHHHHHHHhCCeEEEcc
Q 022300 99 LTDLKEEGKIKTVALTNFDTERLRIILENG-IPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYG 164 (299)
Q Consensus 99 L~~l~~~Gkir~iGvs~~~~~~l~~~~~~~-~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~~~~ 164 (299)
++.+++.|++.. ...+..++++.+ ..+.++--.-++ ..-..+..+|.++||.++-+.
T Consensus 3 ~~~~~kagk~~~------G~~~v~kai~~gkaklViiA~D~~~---~~~~~i~~lc~~~~Ip~~~v~ 60 (82)
T 3v7e_A 3 YDKVSQAKSIII------GTKQTVKALKRGSVKEVVVAKDADP---ILTSSVVSLAEDQGISVSMVE 60 (82)
T ss_dssp HHHHHHCSEEEE------SHHHHHHHHTTTCEEEEEEETTSCH---HHHHHHHHHHHHHTCCEEEES
T ss_pred HHHHHHcCCeeE------cHHHHHHHHHcCCeeEEEEeCCCCH---HHHHHHHHHHHHcCCCEEEEC
Confidence 577888888664 455777777652 233333333322 223468889999999998754
No 179
>3h2y_A GTPase family protein; GTP-binding protein YQEH, possibly involved in replication initiation, csgid, IDP90222; HET: DGI; 1.80A {Bacillus anthracis str}
Probab=20.99 E-value=4.2e+02 Score=23.15 Aligned_cols=83 Identities=11% Similarity=0.066 Sum_probs=56.8
Q ss_pred CCcEEEEecccCCCCCCCHHHHHHHHHHHHhhcCCCcccEEEEecCCCCCCcHHHHHHHHHHHHHcCcccEEEecCCCHH
Q 022300 40 QSSWISLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTE 119 (299)
Q Consensus 40 R~~i~I~tK~~~~~~~~~~~~i~~~ve~SL~~Lg~d~iDl~~lH~pd~~~~~~~~~~~~L~~l~~~Gkir~iGvs~~~~~ 119 (299)
..-++|.+|.--.......+.+.+.+++..+..|....+++.+-- -.. ..++++++.+.++.+...|--+|.+|-...
T Consensus 97 ~p~ilV~NK~DL~~~~~~~~~~~~~l~~~~~~~g~~~~~v~~iSA-~~g-~gi~~L~~~l~~~~~~~~i~~vG~~nvGKS 174 (368)
T 3h2y_A 97 NKVLLVGNKADLIPKSVKHDKVKHWMRYSAKQLGLKPEDVFLISA-AKG-QGIAELADAIEYYRGGKDVYVVGCTNVGKS 174 (368)
T ss_dssp SCEEEEEECGGGSCTTSCHHHHHHHHHHHHHHTTCCCSEEEECCT-TTC-TTHHHHHHHHHHHHTTSCEEEEEBTTSSHH
T ss_pred CcEEEEEEChhcCCcccCHHHHHHHHHHHHHHcCCCcccEEEEeC-CCC-cCHHHHHhhhhhhcccceEEEecCCCCChh
Confidence 456888999854223334566777777777788864446655432 222 237899999988888888999999998876
Q ss_pred HHHHH
Q 022300 120 RLRII 124 (299)
Q Consensus 120 ~l~~~ 124 (299)
.+...
T Consensus 175 tliN~ 179 (368)
T 3h2y_A 175 TFINR 179 (368)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 65443
No 180
>3g13_A Putative conjugative transposon recombinase; resolvase, PSI-II, target 11223F, structural genomics, prote structure initiative; 2.00A {Clostridium difficile}
Probab=20.78 E-value=43 Score=25.87 Aligned_cols=43 Identities=19% Similarity=0.045 Sum_probs=19.4
Q ss_pred HHHHHHhhcCCCcccEEEEecCCCCCCcHHHHHHHHHHHHHcC
Q 022300 64 SIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEG 106 (299)
Q Consensus 64 ~ve~SL~~Lg~d~iDl~~lH~pd~~~~~~~~~~~~L~~l~~~G 106 (299)
.+.+.|+.+....+|.++++..|.-.....+++..++.|.+.|
T Consensus 63 ~l~~ll~~~~~g~id~vvv~~ldRl~R~~~~~~~~~~~l~~~g 105 (169)
T 3g13_A 63 DFQRMINDCMNGEIDMVFTKSISRFARNTLDTLKYVRMLKERN 105 (169)
T ss_dssp HHHHHHHHHHTTCCSEEEESCHHHHCSSHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHcCCCcEEEEEeccccccChHHHHHHHHHHHHcC
Confidence 3344444444444555555544333333444555555554443
No 181
>3lm8_A Thiamine pyrophosphokinase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: VIB; 2.60A {Bacillus subtilis}
Probab=20.72 E-value=1.1e+02 Score=25.15 Aligned_cols=39 Identities=15% Similarity=0.226 Sum_probs=33.6
Q ss_pred CCHHHHHHHHHHhCCCCceeeeccCCCCHHHHHHhHhhh
Q 022300 226 VSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIF 264 (299)
Q Consensus 226 ~s~aq~al~~~l~~~~v~~~i~g~~~~~~e~l~enl~a~ 264 (299)
.|-.++||+|++.++.-..+++|+.-.+.+|.-.|+..+
T Consensus 79 ~TD~e~Al~~a~~~g~~~I~i~Ga~GgR~DH~lani~ll 117 (222)
T 3lm8_A 79 QTDLDLALDWALEKQPDIIQIFGITGGRADHFLGNIQLL 117 (222)
T ss_dssp SCHHHHHHHHHHHHCCSEEEEESCCCSCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHcCCCEEEEEcCCCCchhHHHHHHHHH
Confidence 577899999999988878889999888999988888765
No 182
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=20.68 E-value=94 Score=27.72 Aligned_cols=69 Identities=16% Similarity=0.145 Sum_probs=47.9
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHhCCCCceeeeccCCCCHHHHHHhHhhhc--------CC--CCHHHHHHHHHHHhcCC
Q 022300 215 QTLKRIASKHGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFM--------LS--LDEDDVNSIQEVTKKGK 284 (299)
Q Consensus 215 ~~l~~la~~~~~s~aq~al~~~l~~~~v~~~i~g~~~~~~e~l~enl~a~~--------~~--Lt~e~~~~i~~~~~~~~ 284 (299)
+...+++++++....---+.=++..+.|..|++.+- +..|..-.+++++ +| +|.+|.++|-++.++..
T Consensus 70 ~~a~~~a~~~~~~~~y~d~~~ll~~~~vD~V~I~tp--~~~H~~~~~~al~aGkhVl~EKP~a~~~~ea~~l~~~a~~~g 147 (412)
T 4gqa_A 70 AMAERHAAKLGAEKAYGDWRELVNDPQVDVVDITSP--NHLHYTMAMAAIAAGKHVYCEKPLAVNEQQAQEMAQAARRAG 147 (412)
T ss_dssp HHHHHHHHHHTCSEEESSHHHHHHCTTCCEEEECSC--GGGHHHHHHHHHHTTCEEEEESCSCSSHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCeEECCHHHHhcCCCCCEEEECCC--cHHHHHHHHHHHHcCCCeEeecCCcCCHHHHHHHHHHHHHhC
Confidence 567788889887532223444567888999888888 7777776666553 34 57889998887776554
Q ss_pred C
Q 022300 285 D 285 (299)
Q Consensus 285 ~ 285 (299)
.
T Consensus 148 ~ 148 (412)
T 4gqa_A 148 V 148 (412)
T ss_dssp C
T ss_pred C
Confidence 3
No 183
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=20.62 E-value=2e+02 Score=25.13 Aligned_cols=100 Identities=13% Similarity=0.165 Sum_probs=57.3
Q ss_pred CCCHHHHHHHHHHHHhhcCCCcccEEEEe-cCCCCCCcHHHHHHHHHHHHHc-------CcccEEEecCCCHHHHHHHHH
Q 022300 55 KMTSSIVRESIDVSRRRMDVPCLDMLQFH-WWDYSNPGYLDALNHLTDLKEE-------GKIKTVALTNFDTERLRIILE 126 (299)
Q Consensus 55 ~~~~~~i~~~ve~SL~~Lg~d~iDl~~lH-~pd~~~~~~~~~~~~L~~l~~~-------Gkir~iGvs~~~~~~l~~~~~ 126 (299)
.++.+...+-++..|.++|+++|.+-..- +++ -|+.+.++++. ..++..++..-.. .++.+.+
T Consensus 37 ~~~~~~k~~i~~~~L~~~Gv~~IE~g~~~~~~~--------~~~~v~~~~~~~~~~~~~~~~~i~~l~~~~~-~i~~a~~ 107 (337)
T 3ble_A 37 SFSTSEKLNIAKFLLQKLNVDRVEIASARVSKG--------ELETVQKIMEWAATEQLTERIEILGFVDGNK-TVDWIKD 107 (337)
T ss_dssp CCCHHHHHHHHHHHHHTTCCSEEEEEETTSCTT--------HHHHHHHHHHHHHHTTCGGGEEEEEESSTTH-HHHHHHH
T ss_pred CcCHHHHHHHHHHHHHHcCCCEEEEeCCCCChh--------HHHHHHHHHhhhhhhccCCCCeEEEEccchh-hHHHHHH
Confidence 46777777776657899999999985433 221 13344444442 2245555554333 6777777
Q ss_pred cCCCeeEeeecccccc------cC------hhhHHHHHHHHhCCeEEEc
Q 022300 127 NGIPVVSNQVQHSVVD------MR------PQQKMAELCQLTGVKLITY 163 (299)
Q Consensus 127 ~~~~~~~~q~~~n~~~------~~------~~~~~~~~~~~~gi~v~~~ 163 (299)
.+.+..-+-..-|..+ .. .-.+.+++++++|+.|..+
T Consensus 108 ~g~~~v~i~~~~s~~~~~~~~~~s~~e~l~~~~~~v~~ak~~G~~v~~~ 156 (337)
T 3ble_A 108 SGAKVLNLLTKGSLHHLEKQLGKTPKEFFTDVSFVIEYAIKSGLKINVY 156 (337)
T ss_dssp HTCCEEEEEEECSHHHHHHHTCCCHHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCCEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEE
Confidence 7654333332222211 11 1245788999999887754
No 184
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=20.54 E-value=2.9e+02 Score=23.24 Aligned_cols=9 Identities=11% Similarity=0.165 Sum_probs=5.9
Q ss_pred CHHHHHHhH
Q 022300 253 LAEHIQDTN 261 (299)
Q Consensus 253 ~~e~l~enl 261 (299)
+++|+++.+
T Consensus 217 ~~e~~~~~~ 225 (267)
T 3vnd_A 217 EPEQVRAAI 225 (267)
T ss_dssp SHHHHHHHH
T ss_pred CHHHHHHHH
Confidence 777777444
No 185
>3mcm_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase/dihydropteroate...; folate, TIM barrel, synthase, HPPK, DHPS; 2.20A {Francisella tularensis subsp} PDB: 3mcn_A* 3mco_A*
Probab=20.40 E-value=4.2e+02 Score=24.20 Aligned_cols=102 Identities=15% Similarity=0.088 Sum_probs=63.6
Q ss_pred CCHHHHHHHHHHHHhhcCCCcccEEEEe-cCCCC-CC---cHHHHHHHHHHHHHc-Cc---ccEEEecCCCHHHHHHHHH
Q 022300 56 MTSSIVRESIDVSRRRMDVPCLDMLQFH-WWDYS-NP---GYLDALNHLTDLKEE-GK---IKTVALTNFDTERLRIILE 126 (299)
Q Consensus 56 ~~~~~i~~~ve~SL~~Lg~d~iDl~~lH-~pd~~-~~---~~~~~~~~L~~l~~~-Gk---ir~iGvs~~~~~~l~~~~~ 126 (299)
++.+.+.+..++ +-.=|.|.||+---- +|... .+ .+..+...++.++++ .. =--|.|-++.++.++++++
T Consensus 209 ~~~~~al~~A~~-mv~~GAdIIDIGgeSTrPGa~~Vs~~EE~~Rv~pvI~~l~~~~~~~~~~vpISIDT~~~~VaeaAL~ 287 (442)
T 3mcm_A 209 FDDNQRKLNLDE-LIQSGAEIIDIGAESTKPDAKPISIEEEFNKLNEFLEYFKSQLANLIYKPLVSIDTRKLEVMQKILA 287 (442)
T ss_dssp SCCCHHHHHHHH-HHHHTCSEEEEECCCCCC----CCHHHHHHHHHHHHHHHHHHTTTCSSCCEEEEECCCHHHHHHHHH
T ss_pred CCHHHHHHHHHH-HHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCCCeEEEeCCCHHHHHHHHh
Confidence 555665555554 334589999998432 33221 11 133456667777762 11 1258889999999999998
Q ss_pred --cCCCeeEeeecccccccChhhHHHHHHHHhCCeEEEc
Q 022300 127 --NGIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITY 163 (299)
Q Consensus 127 --~~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~~~ 163 (299)
.|..+.+|-+.- ....++++.+++.|+.++.+
T Consensus 288 ~~aGa~i~INDVsg-----~~d~~m~~v~a~~g~~vVlM 321 (442)
T 3mcm_A 288 KHHDIIWMINDVEC-----NNIEQKAQLIAKYNKKYVII 321 (442)
T ss_dssp HHGGGCCEEEECCC-----TTHHHHHHHHHHHTCEEEEE
T ss_pred hCCCCCEEEEcCCC-----CCChHHHHHHHHhCCeEEEE
Confidence 564442333332 12357999999999999985
No 186
>1chr_A Chloromuconate cycloisomerase; 3.00A {Ralstonia eutropha} PDB: 2chr_A
Probab=20.38 E-value=4.3e+02 Score=23.03 Aligned_cols=86 Identities=8% Similarity=-0.016 Sum_probs=54.2
Q ss_pred cEEEEecCCCCCCcHHHHHHHHHHHHHcCcc-cEEEecCCCHHHHHHHHHcCCCeeEeeecccccc-cChhhHHHHHHHH
Q 022300 78 DMLQFHWWDYSNPGYLDALNHLTDLKEEGKI-KTVALTNFDTERLRIILENGIPVVSNQVQHSVVD-MRPQQKMAELCQL 155 (299)
Q Consensus 78 Dl~~lH~pd~~~~~~~~~~~~L~~l~~~Gki-r~iGvs~~~~~~l~~~~~~~~~~~~~q~~~n~~~-~~~~~~~~~~~~~ 155 (299)
++.++..|-... -++.+.++++.-.| -..|=+-++.+++..+++. ..++++|+..+-.- -..-..+...|++
T Consensus 215 ~i~~iEqP~~~~-----~~~~~~~l~~~~~iPia~dE~~~~~~~~~~~~~~-~~~d~v~~k~~~~GGit~~~~i~~~A~~ 288 (370)
T 1chr_A 215 GVELIEQPVGRE-----NTQALRRLSDNNRVAIMADESLSTLASAFDLARD-RSVDVFSLKLCNMGGVSATQKIAAVAEA 288 (370)
T ss_dssp TEEEEECCSCTT-----CHHHHHHHHHHSCSEEEESSSCCSHHHHHHHHTT-TSCSEEEECTTTSCSHHHHHHHHHHHHH
T ss_pred CCCEEECCCCcc-----cHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHc-CCCCEEEECccccCCHHHHHHHHHHHHH
Confidence 445555553322 24566667665444 3344456778888888775 34777888776532 1223568999999
Q ss_pred hCCeEEEccccccc
Q 022300 156 TGVKLITYGTVMGG 169 (299)
Q Consensus 156 ~gi~v~~~~pl~~G 169 (299)
+|+.++..+.+.++
T Consensus 289 ~g~~~~~~~~~es~ 302 (370)
T 1chr_A 289 SGIASYGGTMLDST 302 (370)
T ss_dssp HTCEEEECCSCCTT
T ss_pred cCCeEEecCCCccH
Confidence 99999987666554
No 187
>2ppw_A Conserved domain protein; the putative RPIB, PSI-2, protein initiative, MCSG, structural genomics, midwest center for S genomics; HET: MSE; 2.01A {Streptococcus pneumoniae}
Probab=20.11 E-value=3.6e+02 Score=22.04 Aligned_cols=93 Identities=9% Similarity=-0.049 Sum_probs=63.1
Q ss_pred HHHHHHHHHhhcCCCcccEEEEecC--CCCCCcHHHHHHHHHHHHHcCcc-cEEEecCCCHHHHHHHHHc-CCCeeEeee
Q 022300 61 VRESIDVSRRRMDVPCLDMLQFHWW--DYSNPGYLDALNHLTDLKEEGKI-KTVALTNFDTERLRIILEN-GIPVVSNQV 136 (299)
Q Consensus 61 i~~~ve~SL~~Lg~d~iDl~~lH~p--d~~~~~~~~~~~~L~~l~~~Gki-r~iGvs~~~~~~l~~~~~~-~~~~~~~q~ 136 (299)
+.+.+.+-|+..|-+.+|+-. +.. +...+ +.+.-....+.+.+|.. +-|-+|....-....+.+. |+....+.-
T Consensus 21 lk~~i~~~L~~~G~eV~D~G~-~s~~d~~s~D-YPd~a~~vA~~V~~g~~d~GIliCGTGiG~sIAANKv~GIRAAlc~d 98 (216)
T 2ppw_A 21 IYDSLKEATDKKGYQLFNYGM-RGEEGESQLT-YVQNGLMAAILLNTKAVDFVVTGCGTGVGAMLALNSFPGVVCGLAVD 98 (216)
T ss_dssp HHHHHHHHHHHHTCEEEECSC-CSCTTCCCCC-HHHHHHHHHHHHHTTSCSEEEEEESSSHHHHHHHTTSTTCCEEECSS
T ss_pred HHHHHHHHHHHCCCEEEEeCC-CCCCCCCCCC-hHHHHHHHHHHHHcCCCCeEEEEcCCcHHHHHHhhcCCCeEEEEeCC
Confidence 668899999999999888853 332 22334 78888888999999988 5677787777766666655 665553322
Q ss_pred cccccccChhhHHHHHHHHh-CCeEEEccc
Q 022300 137 QHSVVDMRPQQKMAELCQLT-GVKLITYGT 165 (299)
Q Consensus 137 ~~n~~~~~~~~~~~~~~~~~-gi~v~~~~p 165 (299)
. .....++++ |-.|++++.
T Consensus 99 ~----------~sA~laR~HNnANVL~lG~ 118 (216)
T 2ppw_A 99 P----------TDAYLYSQINGGNALSIPY 118 (216)
T ss_dssp H----------HHHHHHHHHTCCSEEEEES
T ss_pred H----------HHHHHHHHhcCceEEEeCC
Confidence 2 234455555 577877654
Done!