Your job contains 1 sequence.
>022303
MERTRSSRRSPPPKKRSSKPRATIESLNGDIICMIFSSLGFFDLVRCSAVCKSWNAIINR
CKLLQLLYCKLHGFSNTSGSSMRLHLEELAMKHHRFALEEGRIDIDQWKAHSVGVDQCRM
KRGLILTGVGDKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIVGLIGTRICIWRRN
GLRSVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLS
LSEDQLIISGSSLGSIAISGLSSDQRVATLRSTDCTGHIICLMYPQFLHMLFFLCFLPL
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 022303
(299 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2083735 - symbol:AT3G52030 "AT3G52030" species... 475 1.1e-82 2
ZFIN|ZDB-GENE-050522-303 - symbol:fbxw2 "F-box and WD rep... 144 2.1e-07 1
UNIPROTKB|Q58D00 - symbol:FBXW2 "F-box/WD repeat-containi... 133 4.0e-06 1
UNIPROTKB|E2R6D8 - symbol:FBXW2 "Uncharacterized protein"... 132 5.3e-06 1
UNIPROTKB|Q9UKT8 - symbol:FBXW2 "F-box/WD repeat-containi... 132 5.3e-06 1
RGD|1310460 - symbol:Fbxw2 "F-box and WD repeat domain co... 129 1.2e-05 1
MGI|MGI:1353435 - symbol:Fbxw2 "F-box and WD-40 domain pr... 128 1.3e-05 1
UNIPROTKB|Q5ZK75 - symbol:FBXW2 "Uncharacterized protein"... 123 5.7e-05 1
>TAIR|locus:2083735 [details] [associations]
symbol:AT3G52030 "AT3G52030" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0080008 "Cul4-RING ubiquitin ligase
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00646 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
EMBL:CP002686 GenomeReviews:BA000014_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 SUPFAM:SSF81383 EMBL:AL049711
IPI:IPI00523171 PIR:T49082 RefSeq:NP_190771.2 UniGene:At.3207
UniGene:At.53898 ProteinModelPortal:Q9SV01 SMR:Q9SV01
EnsemblPlants:AT3G52030.1 GeneID:824366 KEGG:ath:AT3G52030
GeneFarm:4037 TAIR:At3g52030 eggNOG:NOG273878 HOGENOM:HOG000006186
InParanoid:Q9SV01 OMA:RVFDMYS PhylomeDB:Q9SV01
ProtClustDB:CLSN2690597 ArrayExpress:Q9SV01 Genevestigator:Q9SV01
Uniprot:Q9SV01
Length = 454
Score = 475 (172.3 bits), Expect = 1.1e-82, Sum P(2) = 1.1e-82
Identities = 91/150 (60%), Positives = 114/150 (76%)
Query: 23 TIESLNGDIICMIFSSLGFFDLVRCSAVCKSWNAIINRCKLLQLLYCKLHGFSNTSGSSM 82
+IESL+ DI+C+IFS L FDLV C+ VC SWNA+I R KLLQ K+H + S SS
Sbjct: 22 SIESLDADILCIIFSFLDLFDLVHCTVVCNSWNAVIKRLKLLQASCRKMHHLGSDSPSSS 81
Query: 83 -------RLHLEELAMKHHRFALEEGRIDIDQWKAHSVGVDQCRMKRGLILTGVGDKVMR 135
+ +E+ AMKHH+ AL GRI+I++W+AHS V QCRMK+GL+LTGVGDKVMR
Sbjct: 82 TSLDRPAEIDVEDFAMKHHKMALLRGRIEIERWEAHSHRVSQCRMKKGLLLTGVGDKVMR 141
Query: 136 LWSLEGYKCVEEYSLPNAASLVDFDFDESK 165
LWSL+ YKC+EEYSLP+A+SL+DFDFDESK
Sbjct: 142 LWSLKSYKCMEEYSLPDASSLIDFDFDESK 171
Score = 373 (136.4 bits), Expect = 1.1e-82, Sum P(2) = 1.1e-82
Identities = 75/128 (58%), Positives = 87/128 (67%)
Query: 165 KIVGLIGTRICIWRRNGLRSVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRK 224
+IVGL+GTRI IWRRNG RS+FPSR GTF KGLCMRY DPEAVVGCEDGTARVFDMYS+
Sbjct: 192 EIVGLVGTRISIWRRNGQRSIFPSRAGTFPKGLCMRYIDPEAVVGCEDGTARVFDMYSKT 251
Query: 225 CSQIIRMHCAPVTSLSLSEDQXXXXXXXXXXXXXXXXXXDQRVATLRSTDCTGHIICLMY 284
CSQIIR P+T LSLS++Q DQ VATL+ST G I + +
Sbjct: 252 CSQIIRTQGGPITCLSLSDNQLFLSGSSLGRVTVSDPLMDQPVATLKSTITAGGIQTICF 311
Query: 285 PQFLHMLF 292
Q ++ F
Sbjct: 312 NQGTNLAF 319
>ZFIN|ZDB-GENE-050522-303 [details] [associations]
symbol:fbxw2 "F-box and WD repeat domain containing
2" species:7955 "Danio rerio" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320
ZFIN:ZDB-GENE-050522-303 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 CTD:26190 HOVERGEN:HBG051593
KO:K10261 EMBL:BC095232 IPI:IPI00832593 RefSeq:NP_001018175.1
UniGene:Dr.79396 ProteinModelPortal:Q503P7 STRING:Q503P7
GeneID:553942 KEGG:dre:553942 InParanoid:Q503P7 NextBio:20880537
ArrayExpress:Q503P7 Uniprot:Q503P7
Length = 455
Score = 144 (55.7 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 58/213 (27%), Positives = 88/213 (41%)
Query: 44 LVRCSAVCKSWNAIINRCKLLQLLYCKLHGFS-NTSGSSMR----LHLE-ELAMKHHRFA 97
L+ C VCK WN +IN C + C+ G+ + S R ++L+ +L MK R
Sbjct: 77 LLTCCLVCKQWNKVINGCTEVWQSVCRDLGWRIDESIQDARHWKVIYLKAKLRMKQLR-- 134
Query: 98 LEEGRIDIDQWKAHSVGVDQCRMKRGLILTGVGDKVMRLWSLEGYKCVEEYSLPNAASLV 157
EE + HS V + GL+ TG D +LW + +CV A++
Sbjct: 135 -EEDAFETSSLIGHSARVYALYYRDGLLCTGSDDLSAKLWDVRTGQCVYGIQTHTCATV- 192
Query: 158 DFDFDESKIV-GLIGTRICIWR-RNGLR-SVFPSREGTFMKGLCMRYFDP-EAVV-GCED 212
FDE K+V G I W G + F G + Y D + +V G D
Sbjct: 193 --KFDEQKLVTGSFDNTIACWEWSTGAKIQQFRGHTGAVFS---IDYNDELDTLVSGSAD 247
Query: 213 GTARVFDMYSRKCSQIIRMHCAPVTSLSLSEDQ 245
T +V+ + + C + H VT + L + Q
Sbjct: 248 FTVKVWSLSAGTCVNTLTGHTEWVTKVHLQKSQ 280
>UNIPROTKB|Q58D00 [details] [associations]
symbol:FBXW2 "F-box/WD repeat-containing protein 2"
species:9913 "Bos taurus" [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00700000104359 HSSP:Q9Y297
EMBL:BT021554 EMBL:BT021797 EMBL:BC120224 IPI:IPI00690435
RefSeq:NP_001070442.1 UniGene:Bt.12194 ProteinModelPortal:Q58D00
STRING:Q58D00 PRIDE:Q58D00 Ensembl:ENSBTAT00000000956 GeneID:767863
KEGG:bta:767863 CTD:26190 HOGENOM:HOG000231971 HOVERGEN:HBG051593
InParanoid:Q58D00 KO:K10261 OMA:QTHTCAT OrthoDB:EOG4KD6M1
NextBio:20918222 Uniprot:Q58D00
Length = 454
Score = 133 (51.9 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 52/208 (25%), Positives = 83/208 (39%)
Query: 44 LVRCSAVCKSWNAIINRCKLLQLLYCKLHGFSNTSGSSMRLHLEELAMKH--HRFALEEG 101
L+ C V K WN +I+ C + CK G+ LH +++ +K LE+
Sbjct: 77 LLTCCLVSKQWNKVISACTEVWQTACKSLGWQIDDSVQDALHWKKVYLKAILRMKQLEDH 136
Query: 102 R-IDIDQWKAHSVGVDQCRMKRGLILTGVGDKVMRLWSLEGYKCVEEYSLPNAASLVDFD 160
+ HS V K GL+ TG D +LW + +CV A++
Sbjct: 137 EAFETSSLIGHSARVYALYYKDGLLCTGSDDLSAKLWDVSTGQCVYGIQTHTCAAV---K 193
Query: 161 FDESKIV-GLIGTRICIWR-RNGLRSV-FPSREGTFMKGLCMRYFDPEAVV--GCEDGTA 215
FDE K+V G + W +G R+ F G + Y D ++ G D T
Sbjct: 194 FDEQKLVTGSFDNTVACWEWSSGARTQHFRGHTGAVFS---VDYNDELDILVSGSADFTV 250
Query: 216 RVFDMYSRKCSQIIRMHCAPVTSLSLSE 243
+V+ + + C + H VT + L +
Sbjct: 251 KVWALSAGTCLNTLTGHTEWVTKVVLQK 278
>UNIPROTKB|E2R6D8 [details] [associations]
symbol:FBXW2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00700000104359 CTD:26190 KO:K10261
OMA:QTHTCAT EMBL:AAEX03008163 EMBL:AAEX03008164 EMBL:AAEX03008165
EMBL:AAEX03008166 EMBL:AAEX03008167 RefSeq:XP_853711.1 SMR:E2R6D8
Ensembl:ENSCAFT00000005736 GeneID:610990 KEGG:cfa:610990
NextBio:20896534 Uniprot:E2R6D8
Length = 454
Score = 132 (51.5 bits), Expect = 5.3e-06, P = 5.3e-06
Identities = 52/208 (25%), Positives = 83/208 (39%)
Query: 44 LVRCSAVCKSWNAIINRCKLLQLLYCKLHGFSNTSGSSMRLHLEELAMKH--HRFALEEG 101
L+ C V K WN +I+ C + CK G+ LH +++ +K LE+
Sbjct: 77 LLTCCLVSKQWNKVISACTEVWQTACKNLGWQIDDSVQDALHWKKVYLKAILRMKQLEDH 136
Query: 102 R-IDIDQWKAHSVGVDQCRMKRGLILTGVGDKVMRLWSLEGYKCVEEYSLPNAASLVDFD 160
+ HS V K GL+ TG D +LW + +CV A++
Sbjct: 137 EAFETSSLIGHSARVYALYYKDGLLCTGSDDLSAKLWDVSTGQCVYGIQTHTCAAV---K 193
Query: 161 FDESKIV-GLIGTRICIWR-RNGLRSV-FPSREGTFMKGLCMRYFDPEAVV--GCEDGTA 215
FDE K+V G + W +G R+ F G + Y D ++ G D T
Sbjct: 194 FDEQKLVTGSFDNTVACWEWSSGARTQHFRGHTGAVFS---VDYNDELDILVSGSADFTV 250
Query: 216 RVFDMYSRKCSQIIRMHCAPVTSLSLSE 243
+V+ + + C + H VT + L +
Sbjct: 251 KVWALSAGTCLNTLTGHTEWVTKVVLQK 278
>UNIPROTKB|Q9UKT8 [details] [associations]
symbol:FBXW2 "F-box/WD repeat-containing protein 2"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=TAS]
[GO:0006464 "cellular protein modification process" evidence=TAS]
[GO:0006508 "proteolysis" evidence=TAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0016567 "protein ubiquitination"
evidence=TAS] Reactome:REACT_17015 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006508 SUPFAM:SSF81383 GO:GO:0004842 CTD:26190
HOVERGEN:HBG051593 KO:K10261 OMA:QTHTCAT OrthoDB:EOG4KD6M1
EMBL:AF176698 EMBL:AF145024 EMBL:AF193594 EMBL:AK022484
EMBL:AK091860 EMBL:AL161911 EMBL:BC018738 EMBL:BC110334
EMBL:AF129531 IPI:IPI00103023 IPI:IPI00385182 RefSeq:NP_036296.2
UniGene:Hs.494985 ProteinModelPortal:Q9UKT8 SMR:Q9UKT8
IntAct:Q9UKT8 MINT:MINT-108586 STRING:Q9UKT8 PhosphoSite:Q9UKT8
DMDM:60416443 PRIDE:Q9UKT8 DNASU:26190 Ensembl:ENST00000340778
Ensembl:ENST00000373926 GeneID:26190 KEGG:hsa:26190 UCSC:uc004bkl.1
UCSC:uc010mvj.1 GeneCards:GC09M123514 HGNC:HGNC:13608 MIM:609071
neXtProt:NX_Q9UKT8 PharmGKB:PA28052 InParanoid:Q9UKT8
PhylomeDB:Q9UKT8 ChiTaRS:FBXW2 GenomeRNAi:26190 NextBio:48322
ArrayExpress:Q9UKT8 Bgee:Q9UKT8 CleanEx:HS_FBXW2
Genevestigator:Q9UKT8 GermOnline:ENSG00000119402 Uniprot:Q9UKT8
Length = 454
Score = 132 (51.5 bits), Expect = 5.3e-06, P = 5.3e-06
Identities = 52/208 (25%), Positives = 83/208 (39%)
Query: 44 LVRCSAVCKSWNAIINRCKLLQLLYCKLHGFSNTSGSSMRLHLEELAMKH--HRFALEEG 101
L+ C V K WN +I+ C + CK G+ LH +++ +K LE+
Sbjct: 77 LLTCCLVSKQWNKVISACTEVWQTACKNLGWQIDDSVQDALHWKKVYLKAILRMKQLEDH 136
Query: 102 R-IDIDQWKAHSVGVDQCRMKRGLILTGVGDKVMRLWSLEGYKCVEEYSLPNAASLVDFD 160
+ HS V K GL+ TG D +LW + +CV A++
Sbjct: 137 EAFETSSLIGHSARVYALYYKDGLLCTGSDDLSAKLWDVSTGQCVYGIQTHTCAAV---K 193
Query: 161 FDESKIV-GLIGTRICIWR-RNGLRSV-FPSREGTFMKGLCMRYFDPEAVV--GCEDGTA 215
FDE K+V G + W +G R+ F G + Y D ++ G D T
Sbjct: 194 FDEQKLVTGSFDNTVACWEWSSGARTQHFRGHTGAVFS---VDYNDELDILVSGSADFTV 250
Query: 216 RVFDMYSRKCSQIIRMHCAPVTSLSLSE 243
+V+ + + C + H VT + L +
Sbjct: 251 KVWALSAGTCLNTLTGHTEWVTKVVLQK 278
>RGD|1310460 [details] [associations]
symbol:Fbxw2 "F-box and WD repeat domain containing 2"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 RGD:1310460
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00700000104359 CTD:26190
HOGENOM:HOG000231971 HOVERGEN:HBG051593 KO:K10261 OMA:QTHTCAT
OrthoDB:EOG4KD6M1 EMBL:CH474001 EMBL:BC166990 IPI:IPI00568489
RefSeq:NP_001101305.1 UniGene:Rn.103250 ProteinModelPortal:B2RZ17
STRING:B2RZ17 Ensembl:ENSRNOT00000025399 GeneID:311881
KEGG:rno:311881 UCSC:RGD:1310460 NextBio:664403 ArrayExpress:B2RZ17
Genevestigator:B2RZ17 Uniprot:B2RZ17
Length = 454
Score = 129 (50.5 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 51/208 (24%), Positives = 82/208 (39%)
Query: 44 LVRCSAVCKSWNAIINRCKLLQLLYCKLHGFSNTSGSSMRLHLEELAMKH--HRFALEEG 101
L+ C V K WN +I+ C + CK G+ LH +++ +K LE+
Sbjct: 77 LLTCCLVSKQWNKVISACTEVWQTACKNLGWQIDDSVQDALHWKKVYLKAILRMKQLEDH 136
Query: 102 R-IDIDQWKAHSVGVDQCRMKRGLILTGVGDKVMRLWSLEGYKCVEEYSLPNAASLVDFD 160
+ HS V K GL+ TG D +LW + +CV A++
Sbjct: 137 EAFETSSLIGHSARVYALYYKDGLLCTGSDDLSAKLWDVSTGQCVYGIQTHTCAAV---K 193
Query: 161 FDESKIV-GLIGTRICIWR-RNGLRSV-FPSREGTFMKGLCMRYFDPEAVV--GCEDGTA 215
FDE K+V G + W +G R+ F G + Y D ++ G D
Sbjct: 194 FDEQKLVTGSFDNTVACWEWSSGARTQHFRGHTGAVFS---VDYSDELDILVSGSADFAV 250
Query: 216 RVFDMYSRKCSQIIRMHCAPVTSLSLSE 243
+V+ + + C + H VT + L +
Sbjct: 251 KVWALSAGTCLNTLTGHTEWVTKVVLQQ 278
>MGI|MGI:1353435 [details] [associations]
symbol:Fbxw2 "F-box and WD-40 domain protein 2"
species:10090 "Mus musculus" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294
SMART:SM00256 SMART:SM00320 MGI:MGI:1353435 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 HOVERGEN:HBG051593 OrthoDB:EOG4KD6M1 ChiTaRS:FBXW2
EMBL:X54352 EMBL:AL929106 IPI:IPI00620767 PIR:A56640
UniGene:Mm.4465 ProteinModelPortal:Q60584 SMR:Q60584 STRING:Q60584
PhosphoSite:Q60584 PRIDE:Q60584 InParanoid:Q60584 CleanEx:MM_FBXW2
Genevestigator:Q60584 GermOnline:ENSMUSG00000035949 Uniprot:Q60584
Length = 422
Score = 128 (50.1 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 51/208 (24%), Positives = 82/208 (39%)
Query: 44 LVRCSAVCKSWNAIINRCKLLQLLYCKLHGFSNTSGSSMRLHLEELAMKH--HRFALEEG 101
L+ C V K WN +I+ C + CK G+ LH +++ +K LE+
Sbjct: 77 LLTCCLVSKQWNKVISACTEVWQTACKNLGWQIDDSVQDSLHWKKVYLKAILRMKQLEDH 136
Query: 102 R-IDIDQWKAHSVGVDQCRMKRGLILTGVGDKVMRLWSLEGYKCVEEYSLPNAASLVDFD 160
+ HS V K GL+ TG D +LW + +CV A++
Sbjct: 137 EAFETSSLIGHSARVYALYYKDGLLCTGSDDLSAKLWDVSTGQCVYGIQTHTCAAV---K 193
Query: 161 FDESKIV-GLIGTRICIWR-RNGLRSV-FPSREGTFMKGLCMRYFDPEAVV--GCEDGTA 215
FDE K+V G + W +G R+ F G + Y D ++ G D
Sbjct: 194 FDEQKLVTGSFDNTVACWEWSSGARTQHFRGHTGAVFS---VDYSDELDILVSGSADFAV 250
Query: 216 RVFDMYSRKCSQIIRMHCAPVTSLSLSE 243
+V+ + + C + H VT + L +
Sbjct: 251 KVWALSAGTCLNTLTGHTEWVTKVVLQK 278
>UNIPROTKB|Q5ZK75 [details] [associations]
symbol:FBXW2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294
SMART:SM00256 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383
GeneTree:ENSGT00700000104359 CTD:26190 HOGENOM:HOG000231971
HOVERGEN:HBG051593 KO:K10261 OMA:QTHTCAT OrthoDB:EOG4KD6M1
EMBL:AADN02026293 EMBL:AJ720209 IPI:IPI00574710
RefSeq:NP_001007843.1 UniGene:Gga.22386 STRING:Q5ZK75
Ensembl:ENSGALT00000001266 GeneID:417088 KEGG:gga:417088
InParanoid:Q5ZK75 NextBio:20820447 Uniprot:Q5ZK75
Length = 454
Score = 123 (48.4 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 48/208 (23%), Positives = 82/208 (39%)
Query: 44 LVRCSAVCKSWNAIINRCKLLQLLYCKLHGFSNTSGSSMRLHLEELAMK---HHRFALEE 100
L+ C V K WN +I+ C + CK G+ LH +++ +K + +
Sbjct: 77 LLTCCLVSKQWNKVISACTEVWQTACKNLGWQIDDSVQDPLHWKKVYLKAILRMKQLKDH 136
Query: 101 GRIDIDQWKAHSVGVDQCRMKRGLILTGVGDKVMRLWSLEGYKCVEEYSLPNAASLVDFD 160
+ HS V + GL+ TG D +LW + +C+ A++
Sbjct: 137 EAFETSSLIGHSARVYALYYRDGLLCTGSDDLSAKLWDVSTGQCIYGIQTHTCATV---K 193
Query: 161 FDESKIV-GLIGTRICIWR-RNGLRSV-FPSREGTFMKGLCMRYFDPEAVV--GCEDGTA 215
FDE K+V G + W +G ++ F G + Y D V+ G D T
Sbjct: 194 FDEQKLVTGSFDNTVACWEWSSGAKTQHFRGHTGAVFS---VDYNDELDVLVSGSADFTV 250
Query: 216 RVFDMYSRKCSQIIRMHCAPVTSLSLSE 243
+V+ + + C + H VT + L +
Sbjct: 251 KVWALSTGTCLNTLTGHTEWVTKVVLQK 278
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.329 0.141 0.452 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 299 264 0.00092 114 3 11 22 0.36 33
32 0.50 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 8
No. of states in DFA: 619 (66 KB)
Total size of DFA: 225 KB (2122 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 18.70u 0.30s 19.00t Elapsed: 00:00:01
Total cpu time: 18.70u 0.30s 19.00t Elapsed: 00:00:01
Start: Tue May 21 01:55:16 2013 End: Tue May 21 01:55:17 2013