Query 022304
Match_columns 299
No_of_seqs 119 out of 1356
Neff 9.5
Searched_HMMs 46136
Date Fri Mar 29 02:31:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022304.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/022304hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF03881 Fructosamin_kin: Fruc 100.0 9.6E-52 2.1E-56 356.7 21.7 283 8-295 2-287 (288)
2 COG3001 Uncharacterized protei 100.0 2.2E-50 4.7E-55 325.6 24.8 281 8-295 2-285 (286)
3 KOG3021 Predicted kinase [Gene 100.0 4.9E-46 1.1E-50 296.9 22.0 287 12-298 2-312 (313)
4 PRK10593 hypothetical protein; 100.0 8.1E-40 1.8E-44 286.2 24.8 277 9-298 2-297 (297)
5 PRK05231 homoserine kinase; Pr 100.0 1.6E-28 3.5E-33 217.9 23.0 242 5-266 6-268 (319)
6 cd05153 HomoserineK_II Homoser 100.0 2.9E-28 6.3E-33 214.0 23.0 235 9-267 2-257 (296)
7 TIGR00938 thrB_alt homoserine 100.0 5.6E-28 1.2E-32 213.2 23.0 241 5-266 6-268 (307)
8 COG2334 Putative homoserine ki 100.0 7.3E-27 1.6E-31 205.0 22.6 241 4-266 9-277 (331)
9 PRK11768 serine/threonine prot 99.9 1.4E-25 3E-30 199.1 20.2 249 3-274 8-278 (325)
10 TIGR02721 ycfN_thiK thiamine k 99.9 1.2E-24 2.6E-29 187.2 20.9 207 27-269 1-223 (256)
11 cd05150 APH Aminoglycoside 3'- 99.9 1.7E-23 3.8E-28 178.7 19.8 218 26-270 2-241 (244)
12 cd05155 APH_ChoK_like_1 Unchar 99.9 3.3E-23 7.1E-28 176.0 18.5 216 27-266 2-233 (235)
13 PLN02876 acyl-CoA dehydrogenas 99.9 1.5E-22 3.3E-27 199.6 22.5 251 6-273 18-328 (822)
14 TIGR02172 Fb_sc_TIGR02172 Fibr 99.9 4.3E-23 9.3E-28 173.6 15.9 191 25-252 4-213 (226)
15 PF01636 APH: Phosphotransfera 99.9 2.5E-23 5.4E-28 176.0 14.0 191 26-237 1-208 (239)
16 TIGR02906 spore_CotS spore coa 99.9 3.3E-22 7.1E-27 177.0 20.8 224 36-271 10-271 (313)
17 cd05152 MPH2' Macrolide 2'-Pho 99.9 8.6E-22 1.9E-26 170.5 21.4 212 19-254 8-247 (276)
18 PRK09550 mtnK methylthioribose 99.9 1.7E-21 3.7E-26 175.0 22.0 221 3-237 4-263 (401)
19 PRK06149 hypothetical protein; 99.9 4.8E-21 1E-25 191.4 24.6 240 5-266 16-292 (972)
20 COG3173 Predicted aminoglycosi 99.9 3.1E-21 6.8E-26 167.6 19.8 233 5-256 7-273 (321)
21 PLN02756 S-methyl-5-thioribose 99.9 3.3E-21 7.1E-26 172.3 20.3 213 4-237 7-270 (418)
22 PRK06148 hypothetical protein; 99.9 5.5E-21 1.2E-25 191.1 23.3 245 4-271 9-290 (1013)
23 cd05157 ETNK_euk Ethanolamine 99.9 2.3E-21 5E-26 164.6 17.2 195 26-237 2-212 (235)
24 cd05154 ACAD10_11_like Acyl-Co 99.9 5.2E-21 1.1E-25 160.6 18.7 192 26-237 2-217 (223)
25 TIGR02904 spore_ysxE spore coa 99.9 3.9E-21 8.5E-26 169.8 16.0 236 13-264 3-273 (309)
26 cd05156 ChoK_euk Choline Kinas 99.9 2.3E-20 5E-25 164.4 18.1 189 26-236 2-223 (302)
27 cd05151 ChoK Choline Kinase (C 99.8 4.4E-20 9.6E-25 148.7 16.0 152 26-253 2-168 (170)
28 PRK12396 5-methylribose kinase 99.8 6.3E-20 1.4E-24 163.2 17.1 213 4-237 8-267 (409)
29 PLN02236 choline kinase 99.8 6E-18 1.3E-22 151.2 23.2 199 8-236 16-241 (344)
30 PLN02421 phosphotransferase, a 99.8 2.1E-18 4.6E-23 153.4 19.4 200 23-252 15-253 (330)
31 TIGR01767 MTRK 5-methylthiorib 99.8 3.8E-18 8.2E-23 150.2 15.6 195 29-237 2-232 (370)
32 PTZ00296 choline kinase; Provi 99.7 8.6E-16 1.9E-20 140.8 22.6 187 25-236 108-323 (442)
33 COG3231 Aph Aminoglycoside pho 99.7 2.9E-16 6.3E-21 127.3 15.3 218 26-269 22-262 (266)
34 PTZ00384 choline kinase; Provi 99.7 1.3E-14 2.9E-19 130.8 21.1 207 8-236 31-266 (383)
35 TIGR02905 spore_yutH spore coa 99.6 8.6E-14 1.9E-18 123.0 20.7 221 17-259 6-259 (313)
36 PRK10271 thiK thiamine kinase; 99.6 2.9E-14 6.2E-19 114.9 13.8 171 95-294 1-185 (188)
37 cd05120 APH_ChoK_like Aminogly 99.6 3.5E-14 7.7E-19 111.1 13.6 145 27-237 3-149 (155)
38 PF07914 DUF1679: Protein of u 99.6 5.2E-14 1.1E-18 128.0 16.2 220 6-237 13-314 (414)
39 PF04655 APH_6_hur: Aminoglyco 99.6 1.4E-13 3E-18 116.9 17.3 211 28-272 8-243 (253)
40 PF02958 EcKinase: Ecdysteroid 99.5 1.3E-13 2.8E-18 121.0 12.9 217 31-251 2-283 (294)
41 PF01633 Choline_kinase: Choli 99.5 9.4E-14 2E-18 116.0 7.4 170 46-237 3-185 (211)
42 COG0510 ycfN Thiamine kinase a 99.4 6.2E-11 1.3E-15 102.1 19.0 199 26-256 10-218 (269)
43 KOG4720 Ethanolamine kinase [L 99.4 6.8E-12 1.5E-16 105.9 11.5 222 11-253 68-321 (391)
44 COG3178 Predicted phosphotrans 99.4 2E-11 4.3E-16 103.2 14.2 178 61-255 67-270 (351)
45 COG4857 Predicted kinase [Gene 99.3 1.6E-11 3.6E-16 102.9 12.5 194 24-236 32-267 (408)
46 TIGR03724 arch_bud32 Kae1-asso 99.3 4E-11 8.7E-16 99.0 12.6 155 30-256 2-182 (199)
47 COG3642 Mn2+-dependent serine/ 99.3 3.8E-11 8.2E-16 95.4 10.7 153 30-254 4-181 (204)
48 PRK10359 lipopolysaccharide co 99.3 9E-11 2E-15 98.1 12.2 92 12-105 22-130 (232)
49 PRK01723 3-deoxy-D-manno-octul 99.2 2.3E-10 5E-15 97.2 13.8 71 32-103 42-131 (239)
50 COG0478 RIO-like serine/threon 99.2 7.1E-11 1.5E-15 99.3 9.8 136 28-234 97-260 (304)
51 PRK14879 serine/threonine prot 99.2 1.7E-10 3.6E-15 96.1 12.1 139 28-235 2-152 (211)
52 TIGR02457 TreS_Cterm trehalose 99.1 5E-09 1.1E-13 97.7 17.3 252 26-293 169-527 (528)
53 PRK09902 hypothetical protein; 99.0 1E-08 2.2E-13 84.3 13.6 181 8-251 7-215 (216)
54 TIGR01982 UbiB 2-polyprenylphe 99.0 3.3E-09 7.2E-14 97.8 11.9 100 3-106 93-246 (437)
55 cd05146 RIO3_euk RIO kinase fa 99.0 5.9E-09 1.3E-13 85.3 11.4 37 62-104 74-110 (197)
56 PRK15123 lipopolysaccharide co 99.0 1.2E-08 2.5E-13 88.0 13.3 66 37-103 37-120 (268)
57 PRK09605 bifunctional UGMP fam 99.0 3.2E-09 6.9E-14 100.8 10.5 161 27-261 338-523 (535)
58 PF01163 RIO1: RIO1 family; I 99.0 4.2E-09 9.1E-14 85.7 9.4 39 61-105 55-95 (188)
59 KOG3087 Serine/threonine prote 98.9 4.1E-08 9E-13 78.1 13.7 165 26-251 11-203 (229)
60 cd05145 RIO1_like RIO kinase f 98.9 2.3E-08 5E-13 82.0 12.4 71 28-104 3-103 (190)
61 smart00090 RIO RIO-like kinase 98.9 3.3E-08 7.2E-13 83.9 12.2 95 2-105 11-135 (237)
62 KOG2686 Choline kinase [Cell w 98.8 5.2E-08 1.1E-12 85.2 11.4 182 24-235 42-252 (366)
63 cd05147 RIO1_euk RIO kinase fa 98.8 3.5E-08 7.6E-13 80.9 9.9 71 29-105 4-104 (190)
64 smart00587 CHK ZnF_C4 abd HLH 98.8 1.4E-08 3E-13 83.8 7.5 58 195-252 118-189 (196)
65 PRK14705 glycogen branching en 98.8 2.7E-07 5.8E-12 93.3 17.7 250 28-295 150-471 (1224)
66 COG1718 RIO1 Serine/threonine 98.8 8.6E-08 1.9E-12 80.0 11.8 142 23-230 48-220 (268)
67 PF06176 WaaY: Lipopolysacchar 98.8 2.2E-07 4.8E-12 76.7 13.4 93 11-105 21-130 (229)
68 PF06293 Kdo: Lipopolysacchari 98.7 6.3E-08 1.4E-12 80.4 9.7 119 58-236 55-185 (206)
69 cd05144 RIO2_C RIO kinase fami 98.7 1.7E-07 3.6E-12 77.4 11.4 73 27-105 20-118 (198)
70 PRK04750 ubiB putative ubiquin 98.7 5.6E-08 1.2E-12 91.2 8.7 99 3-105 95-248 (537)
71 KOG2268 Serine/threonine prote 98.7 2.4E-08 5.3E-13 86.2 5.6 137 24-232 93-258 (465)
72 PRK12274 serine/threonine prot 98.7 2.2E-07 4.8E-12 76.5 10.6 72 27-105 7-85 (218)
73 TIGR02569 TIGR02569_actnb cons 98.7 1.4E-06 3E-11 72.8 14.7 219 26-268 17-248 (272)
74 cd05119 RIO RIO kinase family, 98.6 5.6E-07 1.2E-11 73.3 11.6 70 29-104 4-101 (187)
75 COG0661 AarF Predicted unusual 98.6 1.1E-07 2.4E-12 88.7 8.0 100 3-106 101-254 (517)
76 COG3570 StrB Streptomycin 6-ki 98.6 5.5E-07 1.2E-11 72.7 9.5 165 34-238 24-202 (274)
77 KOG0592 3-phosphoinositide-dep 98.5 7.4E-07 1.6E-11 81.3 9.6 133 28-223 79-219 (604)
78 COG2187 Uncharacterized protei 98.5 4.3E-07 9.3E-12 76.7 7.4 95 180-276 190-298 (337)
79 cd00180 PKc Catalytic domain o 98.5 2.3E-06 4.9E-11 69.9 11.3 71 30-104 1-77 (215)
80 KOG0605 NDR and related serine 98.4 2.2E-06 4.8E-11 78.1 10.8 138 23-224 142-287 (550)
81 PRK09188 serine/threonine prot 98.3 5.2E-06 1.1E-10 74.7 10.2 73 26-105 22-105 (365)
82 KOG1989 ARK protein kinase fam 98.2 2.5E-05 5.3E-10 75.1 12.8 174 21-256 35-236 (738)
83 cd05598 STKc_LATS Catalytic do 98.2 1.5E-05 3.3E-10 72.3 10.9 76 26-105 5-88 (376)
84 KOG0608 Warts/lats-like serine 98.1 6.1E-06 1.3E-10 76.9 7.3 161 6-230 602-781 (1034)
85 cd05626 STKc_LATS2 Catalytic d 98.1 1.7E-05 3.6E-10 72.2 10.2 76 25-104 4-87 (381)
86 cd05627 STKc_NDR2 Catalytic do 98.1 2.2E-05 4.9E-10 70.8 10.6 77 25-105 4-88 (360)
87 cd05628 STKc_NDR1 Catalytic do 98.1 2E-05 4.3E-10 71.2 10.2 76 26-105 5-88 (363)
88 KOG1235 Predicted unusual prot 98.1 2.1E-05 4.6E-10 73.5 10.3 98 6-107 140-291 (538)
89 cd05084 PTKc_Fes Catalytic dom 98.1 3.3E-05 7.1E-10 65.7 10.8 73 29-105 2-80 (252)
90 PLN00034 mitogen-activated pro 98.1 2.2E-05 4.8E-10 70.6 9.9 76 26-105 78-159 (353)
91 cd05614 STKc_MSK2_N N-terminal 98.1 3.2E-05 6.9E-10 68.9 10.4 76 27-105 5-92 (332)
92 cd05587 STKc_cPKC Catalytic do 98.1 3.3E-05 7.1E-10 68.6 10.4 76 27-105 5-88 (324)
93 KOG2270 Serine/threonine prote 98.1 1.9E-05 4.1E-10 69.8 8.4 75 23-103 144-249 (520)
94 cd05102 PTKc_VEGFR3 Catalytic 98.1 1.8E-05 3.8E-10 70.7 8.5 77 27-105 12-99 (338)
95 cd05104 PTKc_Kit Catalytic dom 98.0 4.4E-05 9.6E-10 69.3 11.0 76 27-105 40-126 (375)
96 KOG1187 Serine/threonine prote 98.0 8.9E-05 1.9E-09 66.9 12.5 142 28-228 81-228 (361)
97 cd05573 STKc_ROCK_NDR_like Cat 98.0 2.7E-05 5.9E-10 69.7 9.1 75 27-105 6-88 (350)
98 cd05071 PTKc_Src Catalytic dom 98.0 8.6E-05 1.9E-09 63.7 11.9 75 26-105 10-87 (262)
99 cd05085 PTKc_Fer Catalytic dom 98.0 6.6E-05 1.4E-09 63.7 11.0 73 29-105 2-79 (250)
100 cd05590 STKc_nPKC_eta Catalyti 98.0 4E-05 8.7E-10 68.0 10.1 73 29-104 2-82 (320)
101 cd05600 STKc_Sid2p_Dbf2p Catal 98.0 3.5E-05 7.5E-10 68.7 9.7 75 27-105 6-88 (333)
102 cd07871 STKc_PCTAIRE3 Catalyti 98.0 5.5E-05 1.2E-09 65.9 10.7 73 26-102 9-87 (288)
103 cd05597 STKc_DMPK_like Catalyt 98.0 5.4E-05 1.2E-09 67.5 10.8 75 27-105 6-88 (331)
104 cd05082 PTKc_Csk Catalytic dom 98.0 9.8E-05 2.1E-09 62.9 12.1 76 27-105 11-87 (256)
105 cd05625 STKc_LATS1 Catalytic d 98.0 4.4E-05 9.6E-10 69.4 10.3 77 25-105 4-88 (382)
106 PTZ00267 NIMA-related protein 98.0 8.9E-05 1.9E-09 69.7 12.6 75 27-105 72-152 (478)
107 cd05601 STKc_CRIK Catalytic do 98.0 4.4E-05 9.5E-10 67.9 10.1 75 27-105 6-88 (330)
108 cd05591 STKc_nPKC_epsilon Cata 98.0 5.1E-05 1.1E-09 67.3 10.4 74 29-105 2-83 (321)
109 cd05629 STKc_NDR_like_fungal C 98.0 4E-05 8.7E-10 69.6 9.9 75 27-105 6-88 (377)
110 cd05582 STKc_RSK_N N-terminal 98.0 4.4E-05 9.5E-10 67.6 9.8 73 28-104 2-84 (318)
111 PTZ00263 protein kinase A cata 98.0 5.7E-05 1.2E-09 67.3 10.6 75 27-105 23-105 (329)
112 cd05599 STKc_NDR_like Catalyti 98.0 5E-05 1.1E-09 68.5 10.3 74 27-104 6-87 (364)
113 cd05068 PTKc_Frk_like Catalyti 98.0 0.00011 2.3E-09 63.0 11.7 76 26-105 10-88 (261)
114 KOG0610 Putative serine/threon 98.0 5.2E-05 1.1E-09 67.4 9.6 136 26-223 81-224 (459)
115 PRK13184 pknD serine/threonine 98.0 0.00013 2.7E-09 72.7 13.1 75 27-105 7-89 (932)
116 cd05584 STKc_p70S6K Catalytic 98.0 5E-05 1.1E-09 67.4 9.6 73 28-104 2-86 (323)
117 cd05617 STKc_aPKC_zeta Catalyt 98.0 4.9E-05 1.1E-09 67.7 9.5 74 29-105 2-83 (327)
118 cd05588 STKc_aPKC Catalytic do 98.0 5.2E-05 1.1E-09 67.5 9.6 74 29-105 2-83 (329)
119 cd05069 PTKc_Yes Catalytic dom 97.9 8.7E-05 1.9E-09 63.5 10.5 74 27-105 11-87 (260)
120 cd06649 PKc_MEK2 Catalytic dom 97.9 0.00011 2.3E-09 65.5 11.3 78 24-105 7-90 (331)
121 cd05589 STKc_PKN Catalytic dom 97.9 8.8E-05 1.9E-09 65.9 10.7 78 27-105 4-89 (324)
122 PF00069 Pkinase: Protein kina 97.9 9.2E-05 2E-09 63.0 10.3 73 27-103 4-83 (260)
123 cd07869 STKc_PFTAIRE1 Catalyti 97.9 0.00014 3E-09 63.8 11.7 73 26-102 9-87 (303)
124 smart00219 TyrKc Tyrosine kina 97.9 0.00024 5.2E-09 60.3 12.8 74 28-105 5-88 (258)
125 cd05574 STKc_phototropin_like 97.9 0.00014 3E-09 64.2 11.6 75 27-105 6-88 (316)
126 cd06644 STKc_STK10_LOK Catalyt 97.9 0.00025 5.5E-09 61.7 13.2 75 27-105 17-96 (292)
127 cd05615 STKc_cPKC_alpha Cataly 97.9 8E-05 1.7E-09 66.1 10.1 76 27-105 5-88 (323)
128 cd06638 STKc_myosinIIIA Cataly 97.9 0.00022 4.7E-09 61.8 12.6 77 27-105 23-107 (286)
129 cd05618 STKc_aPKC_iota Catalyt 97.9 6.8E-05 1.5E-09 66.8 9.6 74 29-105 2-83 (329)
130 cd07872 STKc_PCTAIRE2 Catalyti 97.9 0.00012 2.5E-09 64.5 11.0 74 25-102 9-88 (309)
131 cd05072 PTKc_Lyn Catalytic dom 97.9 0.00016 3.4E-09 61.8 11.5 78 24-105 8-88 (261)
132 cd05592 STKc_nPKC_theta_delta 97.9 8.9E-05 1.9E-09 65.6 10.2 74 29-105 2-83 (316)
133 cd05610 STKc_MASTL Catalytic d 97.9 0.0001 2.2E-09 72.1 11.3 75 27-105 9-91 (669)
134 cd05612 STKc_PRKX_like Catalyt 97.9 6E-05 1.3E-09 65.8 8.8 75 27-105 6-88 (291)
135 cd05595 STKc_PKB_beta Catalyti 97.9 7.9E-05 1.7E-09 66.2 9.7 73 29-105 2-82 (323)
136 cd05114 PTKc_Tec_Rlk Catalytic 97.9 0.0002 4.3E-09 61.0 11.8 76 26-105 8-86 (256)
137 cd05616 STKc_cPKC_beta Catalyt 97.9 8.6E-05 1.9E-09 65.9 9.8 76 27-105 5-88 (323)
138 cd05594 STKc_PKB_alpha Catalyt 97.9 0.00026 5.6E-09 62.9 12.8 72 29-104 2-81 (325)
139 cd05596 STKc_ROCK Catalytic do 97.9 0.0001 2.3E-09 66.8 10.4 76 26-105 47-130 (370)
140 PRK10345 hypothetical protein; 97.9 0.00012 2.6E-09 60.8 9.9 77 24-102 4-88 (210)
141 cd05624 STKc_MRCK_beta Catalyt 97.9 0.00012 2.5E-09 65.3 10.5 75 27-105 6-88 (331)
142 cd05041 PTKc_Fes_like Catalyti 97.9 0.00018 4E-09 61.0 11.2 73 29-105 2-79 (251)
143 cd05620 STKc_nPKC_delta Cataly 97.9 0.00012 2.5E-09 64.9 10.2 74 29-105 2-83 (316)
144 KOG0595 Serine/threonine-prote 97.9 8E-05 1.7E-09 66.1 8.8 74 28-105 16-96 (429)
145 cd05083 PTKc_Chk Catalytic dom 97.9 0.00012 2.5E-09 62.4 9.8 74 27-105 11-85 (254)
146 cd05049 PTKc_Trk Catalytic dom 97.9 8.2E-05 1.8E-09 64.2 9.0 74 28-105 11-95 (280)
147 cd05039 PTKc_Csk_like Catalyti 97.9 0.00024 5.3E-09 60.5 11.7 75 27-105 11-87 (256)
148 cd05621 STKc_ROCK2 Catalytic d 97.9 0.00017 3.7E-09 65.4 11.2 76 26-105 47-130 (370)
149 KOG0581 Mitogen-activated prot 97.8 6.2E-05 1.3E-09 65.9 7.8 136 23-223 80-224 (364)
150 cd05593 STKc_PKB_gamma Catalyt 97.8 0.0001 2.2E-09 65.6 9.5 73 29-105 2-82 (328)
151 cd05067 PTKc_Lck_Blk Catalytic 97.8 0.00021 4.6E-09 61.0 11.2 74 27-105 11-87 (260)
152 cd05619 STKc_nPKC_theta Cataly 97.8 0.00014 3.1E-09 64.3 10.2 74 29-105 2-83 (316)
153 PTZ00426 cAMP-dependent protei 97.8 0.00014 3.1E-09 65.1 10.2 75 27-105 35-118 (340)
154 cd05034 PTKc_Src_like Catalyti 97.8 0.00018 4E-09 61.4 10.4 75 27-105 11-88 (261)
155 cd05623 STKc_MRCK_alpha Cataly 97.8 0.00015 3.3E-09 64.6 10.1 75 27-105 6-88 (332)
156 cd05059 PTKc_Tec_like Catalyti 97.8 0.00016 3.4E-09 61.8 9.9 76 26-105 8-86 (256)
157 cd07873 STKc_PCTAIRE1 Catalyti 97.8 0.00023 5E-09 62.3 11.1 74 25-102 9-88 (301)
158 cd05585 STKc_YPK1_like Catalyt 97.8 0.00013 2.8E-09 64.5 9.4 72 30-105 1-80 (312)
159 cd05570 STKc_PKC Catalytic dom 97.8 0.00014 3E-09 64.4 9.7 74 29-105 2-83 (318)
160 cd06650 PKc_MEK1 Catalytic dom 97.8 0.00031 6.8E-09 62.7 12.0 76 26-105 9-90 (333)
161 cd05079 PTKc_Jak1_rpt2 Catalyt 97.8 0.00024 5.1E-09 61.7 10.9 78 25-105 7-95 (284)
162 cd05622 STKc_ROCK1 Catalytic d 97.8 0.00018 3.9E-09 65.3 10.4 77 25-105 46-130 (371)
163 cd05580 STKc_PKA Catalytic dom 97.8 0.00021 4.5E-09 62.3 10.4 75 27-105 6-88 (290)
164 cd06631 STKc_YSK4 Catalytic do 97.8 0.00026 5.7E-09 60.6 10.9 74 28-105 6-89 (265)
165 cd05070 PTKc_Fyn_Yrk Catalytic 97.8 0.00017 3.8E-09 61.6 9.7 74 27-105 11-87 (260)
166 cd06656 STKc_PAK3 Catalytic do 97.8 0.00041 9E-09 60.7 12.3 78 24-105 21-103 (297)
167 cd08219 STKc_Nek3 Catalytic do 97.8 0.00036 7.7E-09 59.4 11.6 74 27-104 5-84 (255)
168 cd05096 PTKc_DDR1 Catalytic do 97.8 0.00034 7.3E-09 61.4 11.7 76 26-105 9-106 (304)
169 cd05122 PKc_STE Catalytic doma 97.8 0.00056 1.2E-08 57.6 12.7 75 27-105 5-84 (253)
170 cd00192 PTKc Catalytic domain 97.8 0.00033 7.3E-09 59.4 11.4 73 29-105 2-83 (262)
171 KOG0583 Serine/threonine prote 97.8 0.00039 8.5E-09 62.9 12.1 138 27-227 22-171 (370)
172 cd05602 STKc_SGK1 Catalytic do 97.8 0.00021 4.4E-09 63.5 10.2 27 197-223 115-141 (325)
173 cd06621 PKc_MAPKK_Pek1_like Ca 97.8 0.00055 1.2E-08 59.5 12.7 79 24-105 3-88 (287)
174 cd05609 STKc_MAST Catalytic do 97.8 0.00025 5.4E-09 62.3 10.6 75 27-105 6-88 (305)
175 cd05571 STKc_PKB Catalytic dom 97.8 0.00032 6.9E-09 62.3 11.4 73 29-105 2-82 (323)
176 PHA03212 serine/threonine kina 97.8 0.00028 6.1E-09 64.5 11.2 70 26-102 96-167 (391)
177 PHA03209 serine/threonine kina 97.8 0.00027 5.8E-09 63.7 11.0 70 26-102 70-141 (357)
178 cd07862 STKc_CDK6 Catalytic do 97.8 0.00035 7.7E-09 60.7 11.4 76 27-102 6-93 (290)
179 cd05052 PTKc_Abl Catalytic dom 97.8 0.00044 9.5E-09 59.2 11.8 77 25-105 9-89 (263)
180 cd05613 STKc_MSK1_N N-terminal 97.8 0.00032 7E-09 61.0 11.1 76 27-105 5-92 (290)
181 cd07848 STKc_CDKL5 Catalytic d 97.8 0.00029 6.3E-09 61.1 10.7 73 27-103 6-85 (287)
182 cd05088 PTKc_Tie2 Catalytic do 97.8 0.00018 3.8E-09 63.3 9.4 74 28-104 13-94 (303)
183 PHA03211 serine/threonine kina 97.7 0.00038 8.1E-09 65.0 11.9 69 27-102 174-244 (461)
184 cd05603 STKc_SGK2 Catalytic do 97.7 0.0003 6.5E-09 62.3 10.7 27 197-223 115-141 (321)
185 KOG0598 Ribosomal protein S6 k 97.7 0.0002 4.4E-09 62.7 9.1 133 27-223 30-170 (357)
186 cd05604 STKc_SGK3 Catalytic do 97.7 0.00035 7.6E-09 62.0 10.8 27 197-223 115-141 (325)
187 cd05608 STKc_GRK1 Catalytic do 97.7 0.00016 3.4E-09 62.8 8.4 72 30-105 1-80 (280)
188 cd06625 STKc_MEKK3_like Cataly 97.7 0.00049 1.1E-08 58.7 11.3 75 27-105 7-91 (263)
189 cd06615 PKc_MEK Catalytic doma 97.7 0.0006 1.3E-08 60.0 12.1 76 26-105 5-86 (308)
190 cd05113 PTKc_Btk_Bmx Catalytic 97.7 0.00049 1.1E-08 58.7 11.3 76 26-105 8-86 (256)
191 cd08228 STKc_Nek6 Catalytic do 97.7 0.00024 5.3E-09 60.8 9.4 75 27-105 7-89 (267)
192 cd05631 STKc_GRK4 Catalytic do 97.7 0.00044 9.5E-09 60.1 11.1 76 26-105 4-87 (285)
193 KOG0596 Dual specificity; seri 97.7 7.9E-05 1.7E-09 68.6 6.4 71 27-100 366-442 (677)
194 cd05073 PTKc_Hck Catalytic dom 97.7 0.00046 1E-08 59.0 11.0 78 23-105 7-87 (260)
195 cd05581 STKc_PDK1 Catalytic do 97.7 0.00019 4.2E-09 61.7 8.7 75 28-105 7-89 (280)
196 cd06608 STKc_myosinIII_like Ca 97.7 0.00069 1.5E-08 58.0 12.1 77 27-105 11-96 (275)
197 cd05112 PTKc_Itk Catalytic dom 97.7 0.00068 1.5E-08 57.6 11.9 77 25-105 7-86 (256)
198 KOG0615 Serine/threonine prote 97.7 0.00047 1E-08 61.5 10.8 72 28-105 178-263 (475)
199 cd05106 PTKc_CSF-1R Catalytic 97.7 0.00036 7.9E-09 63.3 10.6 77 26-105 42-129 (374)
200 cd06654 STKc_PAK1 Catalytic do 97.7 0.0012 2.7E-08 57.6 13.7 94 8-105 2-104 (296)
201 cd06639 STKc_myosinIIIB Cataly 97.7 0.00085 1.8E-08 58.3 12.6 79 25-105 25-111 (291)
202 cd07863 STKc_CDK4 Catalytic do 97.7 0.00065 1.4E-08 58.9 11.7 76 27-102 5-91 (288)
203 cd06611 STKc_SLK_like Catalyti 97.7 0.00052 1.1E-08 59.3 11.0 74 28-105 11-89 (280)
204 KOG0594 Protein kinase PCTAIRE 97.7 0.00041 8.8E-09 60.5 10.1 149 25-232 14-176 (323)
205 cd08215 STKc_Nek Catalytic dom 97.7 0.00089 1.9E-08 56.6 12.2 75 27-105 5-86 (258)
206 cd05579 STKc_MAST_like Catalyt 97.7 0.00045 9.7E-09 58.8 10.4 71 31-105 2-80 (265)
207 cd05038 PTKc_Jak_rpt2 Catalyti 97.7 0.00067 1.4E-08 58.5 11.6 77 26-105 8-95 (284)
208 PHA03207 serine/threonine kina 97.7 0.00042 9.1E-09 63.3 10.8 71 26-102 96-170 (392)
209 cd06614 STKc_PAK Catalytic dom 97.7 0.00057 1.2E-08 59.3 11.1 76 26-105 23-102 (286)
210 cd05103 PTKc_VEGFR2 Catalytic 97.7 0.00078 1.7E-08 60.3 12.2 80 24-105 9-99 (343)
211 cd05586 STKc_Sck1_like Catalyt 97.6 0.00046 1E-08 61.4 10.6 27 197-223 115-141 (330)
212 cd08217 STKc_Nek2 Catalytic do 97.6 0.00062 1.3E-08 57.9 11.0 75 28-105 6-88 (265)
213 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 97.6 0.00058 1.2E-08 59.1 10.9 77 26-105 8-94 (284)
214 cd08224 STKc_Nek6_Nek7 Catalyt 97.6 0.00038 8.3E-09 59.5 9.7 75 27-105 7-89 (267)
215 KOG0192 Tyrosine kinase specif 97.6 0.0009 1.9E-08 60.3 12.2 75 28-105 47-127 (362)
216 cd06629 STKc_MAPKKK_Bck1_like 97.6 0.00067 1.4E-08 58.3 11.0 75 27-105 6-95 (272)
217 cd07870 STKc_PFTAIRE2 Catalyti 97.6 0.00099 2.2E-08 57.9 12.2 74 25-102 8-87 (291)
218 cd05118 STKc_CMGC Catalytic do 97.6 0.00066 1.4E-08 58.5 11.0 72 27-102 4-82 (283)
219 cd07861 STKc_CDK1_euk Catalyti 97.6 0.00057 1.2E-08 59.1 10.5 72 27-102 5-83 (285)
220 cd07841 STKc_CDK7 Catalytic do 97.6 0.00055 1.2E-08 59.7 10.5 72 27-103 5-86 (298)
221 cd06627 STKc_Cdc7_like Catalyt 97.6 0.0015 3.3E-08 55.1 12.9 74 27-104 5-85 (254)
222 cd06648 STKc_PAK_II Catalytic 97.6 0.0016 3.5E-08 56.6 13.2 79 23-105 20-103 (285)
223 cd05148 PTKc_Srm_Brk Catalytic 97.6 0.00074 1.6E-08 57.6 11.0 75 27-105 11-89 (261)
224 cd05575 STKc_SGK Catalytic dom 97.6 0.00047 1E-08 61.2 9.9 27 197-223 115-141 (323)
225 cd06613 STKc_MAP4K3_like Catal 97.6 0.0024 5.3E-08 54.3 14.1 76 26-105 7-87 (262)
226 cd06633 STKc_TAO3 Catalytic do 97.6 0.0011 2.3E-08 58.6 12.1 91 8-102 7-105 (313)
227 cd05097 PTKc_DDR_like Catalyti 97.6 0.00088 1.9E-08 58.4 11.5 74 28-105 11-104 (295)
228 cd07859 STKc_TDY_MAPK_plant Ca 97.6 0.00046 1E-08 61.4 9.8 73 27-102 5-88 (338)
229 cd07876 STKc_JNK2 Catalytic do 97.6 0.00067 1.5E-08 61.1 10.9 75 26-103 25-111 (359)
230 COG3281 Ble Uncharacterized pr 97.6 0.0018 4E-08 56.6 12.8 98 197-295 284-430 (438)
231 cd05633 STKc_GRK3 Catalytic do 97.6 0.00066 1.4E-08 58.8 10.5 27 197-223 116-142 (279)
232 cd06917 STKc_NAK1_like Catalyt 97.6 0.00069 1.5E-08 58.4 10.5 78 27-105 6-89 (277)
233 cd06605 PKc_MAPKK Catalytic do 97.6 0.00038 8.3E-09 59.5 8.8 75 27-105 6-86 (265)
234 cd08529 STKc_FA2-like Catalyti 97.6 0.0012 2.5E-08 56.1 11.7 74 28-105 6-86 (256)
235 cd05605 STKc_GRK4_like Catalyt 97.6 0.00069 1.5E-08 58.9 10.5 75 27-105 5-87 (285)
236 cd05607 STKc_GRK7 Catalytic do 97.6 0.00091 2E-08 57.9 11.1 72 30-105 1-80 (277)
237 cd05583 STKc_MSK_N N-terminal 97.6 0.00053 1.1E-08 59.5 9.6 76 27-105 5-92 (288)
238 cd07832 STKc_CCRK Catalytic do 97.6 0.00073 1.6E-08 58.4 10.5 73 28-105 6-85 (286)
239 cd06606 STKc_MAPKKK Catalytic 97.6 0.00091 2E-08 56.5 10.8 74 27-104 5-87 (260)
240 cd06628 STKc_MAPKKK_Byr2_like 97.6 0.00072 1.6E-08 57.8 10.3 74 28-105 6-93 (267)
241 cd05053 PTKc_FGFR Catalytic do 97.6 0.00066 1.4E-08 59.0 10.2 79 24-105 14-103 (293)
242 cd05105 PTKc_PDGFR_alpha Catal 97.6 0.00091 2E-08 61.4 11.4 76 27-105 42-128 (400)
243 cd07837 STKc_CdkB_plant Cataly 97.5 0.0015 3.2E-08 56.9 12.1 74 27-102 6-90 (295)
244 cd05572 STKc_cGK_PKG Catalytic 97.5 0.00061 1.3E-08 58.2 9.5 72 30-105 1-80 (262)
245 cd05632 STKc_GRK5 Catalytic do 97.5 0.0013 2.8E-08 57.1 11.7 76 26-105 4-87 (285)
246 cd08528 STKc_Nek10 Catalytic d 97.5 0.0012 2.7E-08 56.5 11.4 27 197-223 133-159 (269)
247 cd05123 STKc_AGC Catalytic dom 97.5 0.00077 1.7E-08 57.0 10.0 72 30-105 1-80 (250)
248 cd05042 PTKc_Aatyk Catalytic d 97.5 0.0014 3E-08 56.2 11.7 73 29-105 2-82 (269)
249 cd05033 PTKc_EphR Catalytic do 97.5 0.0012 2.7E-08 56.5 11.3 76 26-105 8-92 (266)
250 cd06612 STKc_MST1_2 Catalytic 97.5 0.00077 1.7E-08 57.2 10.0 75 27-105 8-85 (256)
251 PHA03390 pk1 serine/threonine- 97.5 0.0015 3.3E-08 56.1 12.0 78 23-105 17-96 (267)
252 cd05611 STKc_Rim15_like Cataly 97.5 0.00084 1.8E-08 57.2 10.2 75 28-105 2-84 (260)
253 cd07844 STKc_PCTAIRE_like Cata 97.5 0.00084 1.8E-08 58.3 10.4 74 25-102 8-87 (291)
254 cd06610 STKc_OSR1_SPAK Catalyt 97.5 0.0016 3.5E-08 55.5 12.0 75 27-105 6-86 (267)
255 cd05080 PTKc_Tyk2_rpt2 Catalyt 97.5 0.0014 3E-08 56.7 11.7 77 26-105 8-95 (283)
256 cd05578 STKc_Yank1 Catalytic d 97.5 0.00052 1.1E-08 58.5 8.7 75 27-105 5-87 (258)
257 cd07835 STKc_CDK1_like Catalyt 97.5 0.00089 1.9E-08 57.9 10.3 72 27-102 4-82 (283)
258 cd06623 PKc_MAPKK_plant_like C 97.5 0.00084 1.8E-08 57.2 10.0 75 27-105 6-86 (264)
259 cd08223 STKc_Nek4 Catalytic do 97.5 0.003 6.6E-08 53.6 13.4 75 28-105 6-87 (257)
260 cd05048 PTKc_Ror Catalytic Dom 97.5 0.00071 1.5E-08 58.5 9.6 76 26-105 9-95 (283)
261 cd05066 PTKc_EphR_A Catalytic 97.5 0.001 2.2E-08 57.1 10.4 75 27-105 9-92 (267)
262 cd07846 STKc_CDKL2_3 Catalytic 97.5 0.00086 1.9E-08 58.0 9.9 74 26-103 5-85 (286)
263 cd05065 PTKc_EphR_B Catalytic 97.5 0.0013 2.9E-08 56.3 11.0 75 27-105 9-92 (269)
264 cd06619 PKc_MKK5 Catalytic dom 97.5 0.0013 2.9E-08 56.8 11.1 75 27-105 6-86 (279)
265 cd07875 STKc_JNK1 Catalytic do 97.5 0.0015 3.2E-08 59.0 11.7 75 26-103 28-114 (364)
266 cd06641 STKc_MST3 Catalytic do 97.5 0.0025 5.5E-08 55.0 12.7 76 26-105 8-89 (277)
267 cd08221 STKc_Nek9 Catalytic do 97.5 0.0014 2.9E-08 55.8 10.9 76 26-105 4-86 (256)
268 cd07867 STKc_CDC2L6 Catalytic 97.5 0.0017 3.7E-08 57.1 11.8 72 28-102 7-84 (317)
269 KOG0198 MEKK and related serin 97.5 0.0013 2.8E-08 57.8 10.7 133 26-223 21-163 (313)
270 cd05045 PTKc_RET Catalytic dom 97.5 0.002 4.2E-08 56.1 12.0 74 28-105 6-90 (290)
271 cd05101 PTKc_FGFR2 Catalytic d 97.5 0.0007 1.5E-08 59.4 9.2 77 26-105 19-108 (304)
272 KOG0575 Polo-like serine/threo 97.5 0.0011 2.4E-08 61.8 10.5 132 28-223 24-163 (592)
273 cd07839 STKc_CDK5 Catalytic do 97.5 0.00098 2.1E-08 57.6 10.0 72 27-102 5-83 (284)
274 cd07836 STKc_Pho85 Catalytic d 97.5 0.0017 3.7E-08 56.1 11.5 73 26-102 4-82 (284)
275 smart00221 STYKc Protein kinas 97.5 0.0014 3.1E-08 54.1 10.6 73 28-104 5-83 (225)
276 cd07868 STKc_CDK8 Catalytic do 97.5 0.0018 3.9E-08 57.1 11.7 72 28-102 7-84 (317)
277 cd08218 STKc_Nek1 Catalytic do 97.5 0.0013 2.8E-08 55.8 10.5 75 27-105 5-86 (256)
278 cd05046 PTK_CCK4 Pseudokinase 97.5 0.0029 6.3E-08 54.4 12.7 78 24-105 7-95 (275)
279 cd05047 PTKc_Tie Catalytic dom 97.5 0.00062 1.3E-08 58.6 8.5 74 29-105 2-83 (270)
280 cd05050 PTKc_Musk Catalytic do 97.5 0.0024 5.2E-08 55.4 12.2 76 26-105 9-95 (288)
281 cd05098 PTKc_FGFR1 Catalytic d 97.5 0.00092 2E-08 58.7 9.7 76 27-105 23-111 (307)
282 cd06626 STKc_MEKK4 Catalytic d 97.5 0.0016 3.5E-08 55.5 11.0 74 28-105 6-86 (264)
283 cd07838 STKc_CDK4_6_like Catal 97.4 0.0026 5.6E-08 54.9 12.3 76 27-102 4-90 (287)
284 cd06655 STKc_PAK2 Catalytic do 97.4 0.0045 9.8E-08 54.1 13.9 78 24-105 21-103 (296)
285 cd05087 PTKc_Aatyk1_Aatyk3 Cat 97.4 0.0027 5.8E-08 54.5 12.2 73 29-105 2-82 (269)
286 PTZ00024 cyclin-dependent prot 97.4 0.0011 2.3E-08 59.1 9.9 70 29-102 16-104 (335)
287 cd07833 STKc_CDKL Catalytic do 97.4 0.0013 2.9E-08 56.8 10.2 73 27-103 6-85 (288)
288 cd06646 STKc_MAP4K5 Catalytic 97.4 0.0026 5.7E-08 54.4 12.0 76 26-105 13-93 (267)
289 cd05115 PTKc_Zap-70 Catalytic 97.4 0.0015 3.3E-08 55.7 10.4 72 29-105 2-81 (257)
290 cd05109 PTKc_HER2 Catalytic do 97.4 0.0027 5.8E-08 54.8 12.0 77 23-104 8-94 (279)
291 cd06632 STKc_MEKK1_plant Catal 97.4 0.0023 5E-08 54.3 11.4 74 28-105 6-89 (258)
292 cd06640 STKc_MST4 Catalytic do 97.4 0.0025 5.4E-08 55.0 11.7 76 26-105 8-89 (277)
293 cd07853 STKc_NLK Catalytic dom 97.4 0.001 2.2E-08 60.3 9.5 73 27-102 5-88 (372)
294 cd07874 STKc_JNK3 Catalytic do 97.4 0.0019 4.1E-08 58.0 11.3 75 26-103 21-107 (355)
295 KOG0585 Ca2+/calmodulin-depend 97.4 0.0014 3E-08 59.6 9.9 76 27-105 102-197 (576)
296 cd06617 PKc_MKK3_6 Catalytic d 97.4 0.0029 6.3E-08 54.6 12.0 74 26-102 5-84 (283)
297 cd05094 PTKc_TrkC Catalytic do 97.4 0.00055 1.2E-08 59.6 7.5 75 27-105 10-94 (291)
298 cd06607 STKc_TAO Catalytic dom 97.4 0.0033 7.1E-08 55.2 12.4 90 10-103 3-100 (307)
299 cd06635 STKc_TAO1 Catalytic do 97.4 0.0041 9E-08 54.9 13.1 75 24-102 27-109 (317)
300 cd05630 STKc_GRK6 Catalytic do 97.4 0.0025 5.5E-08 55.3 11.6 75 27-105 5-87 (285)
301 cd08229 STKc_Nek7 Catalytic do 97.4 0.0013 2.8E-08 56.2 9.6 74 28-105 8-89 (267)
302 KOG3653 Transforming growth fa 97.4 0.0013 2.9E-08 59.6 9.6 184 27-268 215-410 (534)
303 cd05099 PTKc_FGFR4 Catalytic d 97.4 0.0017 3.6E-08 57.3 10.4 80 23-105 13-105 (314)
304 cd08225 STKc_Nek5 Catalytic do 97.4 0.0015 3.2E-08 55.5 9.8 75 27-105 5-86 (257)
305 cd05055 PTKc_PDGFR Catalytic d 97.4 0.0019 4E-08 56.7 10.6 77 26-105 39-126 (302)
306 cd06643 STKc_SLK Catalytic dom 97.4 0.0036 7.7E-08 54.1 12.3 74 28-105 11-89 (282)
307 cd06642 STKc_STK25-YSK1 Cataly 97.4 0.0013 2.9E-08 56.7 9.5 75 27-105 9-89 (277)
308 cd05037 PTK_Jak_rpt1 Pseudokin 97.4 0.0028 6.1E-08 53.8 11.4 72 29-105 2-87 (259)
309 cd07847 STKc_CDKL1_4 Catalytic 97.4 0.0024 5.1E-08 55.2 11.0 73 27-103 6-85 (286)
310 cd05108 PTKc_EGFR Catalytic do 97.4 0.0029 6.2E-08 55.9 11.7 78 23-105 8-95 (316)
311 cd06637 STKc_TNIK Catalytic do 97.4 0.0018 3.9E-08 55.5 10.2 77 27-105 11-96 (272)
312 cd05090 PTKc_Ror1 Catalytic do 97.4 0.0036 7.9E-08 54.1 12.1 74 28-105 11-94 (283)
313 KOG0668 Casein kinase II, alph 97.4 0.00018 4E-09 59.4 3.6 75 27-103 43-120 (338)
314 PTZ00036 glycogen synthase kin 97.4 0.0034 7.3E-08 58.4 12.5 75 24-102 68-151 (440)
315 cd05062 PTKc_IGF-1R Catalytic 97.4 0.0041 9E-08 53.6 12.4 75 27-105 11-96 (277)
316 cd06636 STKc_MAP4K4_6 Catalyti 97.4 0.0022 4.8E-08 55.4 10.7 77 27-105 21-106 (282)
317 cd07840 STKc_CDK9_like Catalyt 97.3 0.0017 3.6E-08 56.1 9.9 73 27-102 4-84 (287)
318 cd05051 PTKc_DDR Catalytic dom 97.3 0.0021 4.5E-08 55.9 10.5 75 27-105 10-106 (296)
319 cd07845 STKc_CDK10 Catalytic d 97.3 0.0021 4.6E-08 56.4 10.6 74 26-102 11-92 (309)
320 cd05063 PTKc_EphR_A2 Catalytic 97.3 0.0029 6.2E-08 54.2 11.2 78 24-105 7-93 (268)
321 cd05060 PTKc_Syk_like Catalyti 97.3 0.0028 6.2E-08 53.9 11.0 72 29-105 2-82 (257)
322 cd06652 STKc_MEKK2 Catalytic d 97.3 0.0039 8.5E-08 53.3 11.9 76 27-105 7-93 (265)
323 cd05577 STKc_GRK Catalytic dom 97.3 0.0018 3.9E-08 55.9 9.9 72 30-105 1-80 (277)
324 cd05116 PTKc_Syk Catalytic dom 97.3 0.003 6.6E-08 53.8 11.2 72 29-105 2-82 (257)
325 cd05100 PTKc_FGFR3 Catalytic d 97.3 0.0044 9.6E-08 55.1 12.6 76 27-105 17-105 (334)
326 cd05061 PTKc_InsR Catalytic do 97.3 0.0023 5.1E-08 55.6 10.6 75 27-105 11-96 (288)
327 KOG0612 Rho-associated, coiled 97.3 0.00018 3.9E-09 71.4 3.8 131 28-223 81-220 (1317)
328 cd05606 STKc_beta_ARK Catalyti 97.3 0.0029 6.3E-08 54.7 11.1 27 197-223 116-142 (278)
329 cd05107 PTKc_PDGFR_beta Cataly 97.3 0.0015 3.3E-08 59.9 9.7 76 27-105 42-128 (401)
330 cd08227 PK_STRAD_alpha Pseudok 97.3 0.0025 5.5E-08 56.5 10.9 73 29-105 5-86 (327)
331 KOG0667 Dual-specificity tyros 97.3 0.0015 3.3E-08 61.2 9.6 73 27-100 191-270 (586)
332 PTZ00284 protein kinase; Provi 97.3 0.0026 5.6E-08 59.6 11.4 77 26-102 133-216 (467)
333 cd06609 STKc_MST3_like Catalyt 97.3 0.002 4.4E-08 55.4 10.0 74 28-105 7-86 (274)
334 cd06657 STKc_PAK4 Catalytic do 97.3 0.0011 2.3E-08 58.0 8.3 75 27-105 25-104 (292)
335 cd07831 STKc_MOK Catalytic dom 97.3 0.0028 6.1E-08 54.6 10.9 74 27-102 4-84 (282)
336 cd05089 PTKc_Tie1 Catalytic do 97.3 0.0021 4.7E-08 56.1 10.2 75 28-105 8-90 (297)
337 cd05095 PTKc_DDR2 Catalytic do 97.3 0.0031 6.8E-08 55.0 11.2 76 26-105 9-106 (296)
338 cd08220 STKc_Nek8 Catalytic do 97.3 0.0033 7.2E-08 53.2 11.1 76 26-105 4-86 (256)
339 cd08530 STKc_CNK2-like Catalyt 97.3 0.0025 5.3E-08 54.0 10.3 75 27-105 5-86 (256)
340 cd06620 PKc_MAPKK_Byr1_like Ca 97.3 0.0011 2.4E-08 57.5 8.2 75 27-105 10-90 (284)
341 cd07860 STKc_CDK2_3 Catalytic 97.3 0.0027 5.9E-08 54.8 10.6 73 26-102 4-83 (284)
342 cd05086 PTKc_Aatyk2 Catalytic 97.3 0.0035 7.6E-08 53.8 11.2 73 29-105 2-82 (268)
343 cd07830 STKc_MAK_like Catalyti 97.3 0.0022 4.8E-08 55.3 9.8 72 28-102 5-82 (283)
344 KOG4250 TANK binding protein k 97.3 0.00087 1.9E-08 63.6 7.5 80 23-105 14-104 (732)
345 cd05057 PTKc_EGFR_like Catalyt 97.3 0.0048 1E-07 53.2 11.8 78 23-105 8-95 (279)
346 KOG0600 Cdc2-related protein k 97.3 0.0018 3.9E-08 59.2 9.1 137 25-223 120-263 (560)
347 cd06651 STKc_MEKK3 Catalytic d 97.3 0.0036 7.8E-08 53.6 10.8 76 27-105 7-93 (266)
348 cd05044 PTKc_c-ros Catalytic d 97.3 0.0024 5.2E-08 54.7 9.7 73 29-105 2-86 (269)
349 cd06616 PKc_MKK4 Catalytic dom 97.2 0.003 6.5E-08 54.7 10.3 74 26-102 8-87 (288)
350 PTZ00266 NIMA-related protein 97.2 0.0039 8.4E-08 62.8 12.1 77 26-105 17-101 (1021)
351 cd06622 PKc_MAPKK_PBS2_like Ca 97.2 0.0029 6.3E-08 54.7 10.1 75 27-105 6-86 (286)
352 cd06630 STKc_MEKK1 Catalytic d 97.2 0.0036 7.9E-08 53.4 10.4 74 28-105 6-90 (268)
353 cd06618 PKc_MKK7 Catalytic dom 97.2 0.003 6.4E-08 55.1 9.9 75 25-102 18-98 (296)
354 cd07850 STKc_JNK Catalytic dom 97.2 0.0042 9E-08 55.8 10.8 75 25-102 19-105 (353)
355 cd06659 STKc_PAK6 Catalytic do 97.2 0.0045 9.8E-08 54.1 10.8 76 26-105 25-105 (297)
356 KOG0616 cAMP-dependent protein 97.2 0.0041 8.9E-08 53.4 9.8 131 26-223 48-189 (355)
357 PLN00009 cyclin-dependent kina 97.2 0.0067 1.4E-07 52.8 11.8 73 26-102 6-85 (294)
358 cd05077 PTK_Jak1_rpt1 Pseudoki 97.2 0.0071 1.5E-07 51.8 11.7 73 29-105 2-91 (262)
359 cd06653 STKc_MEKK3_like_1 Cata 97.2 0.0029 6.2E-08 54.2 9.2 76 27-105 7-93 (264)
360 cd06624 STKc_ASK Catalytic dom 97.2 0.011 2.3E-07 50.6 12.8 74 28-105 14-92 (268)
361 cd07855 STKc_ERK5 Catalytic do 97.2 0.0029 6.2E-08 56.4 9.4 73 27-102 10-92 (334)
362 cd07842 STKc_CDK8_like Catalyt 97.1 0.0068 1.5E-07 53.2 11.7 73 27-102 5-88 (316)
363 KOG0663 Protein kinase PITSLRE 97.1 0.0062 1.3E-07 53.2 10.8 146 27-234 81-235 (419)
364 PTZ00283 serine/threonine prot 97.1 0.0042 9.1E-08 58.7 10.9 27 197-223 162-188 (496)
365 cd05093 PTKc_TrkB Catalytic do 97.1 0.0038 8.3E-08 54.2 10.0 76 26-105 9-94 (288)
366 cd05056 PTKc_FAK Catalytic dom 97.1 0.011 2.5E-07 50.5 12.8 74 27-105 11-93 (270)
367 cd05054 PTKc_VEGFR Catalytic d 97.1 0.004 8.6E-08 55.7 10.2 77 27-105 12-99 (337)
368 cd07834 STKc_MAPK Catalytic do 97.1 0.0032 7E-08 55.8 9.5 73 27-102 5-88 (330)
369 KOG1163 Casein kinase (serine/ 97.1 0.016 3.5E-07 48.5 12.6 77 21-100 14-93 (341)
370 cd08226 PK_STRAD_beta Pseudoki 97.1 0.0045 9.8E-08 54.9 10.4 67 34-104 12-85 (328)
371 cd05035 PTKc_Axl_like Catalyti 97.1 0.0091 2E-07 51.1 12.0 75 28-105 5-94 (273)
372 cd07843 STKc_CDC2L1 Catalytic 97.1 0.0035 7.6E-08 54.5 9.5 73 27-102 10-90 (293)
373 KOG0578 p21-activated serine/t 97.1 0.0017 3.7E-08 60.1 7.5 95 6-106 253-358 (550)
374 cd05036 PTKc_ALK_LTK Catalytic 97.1 0.01 2.3E-07 51.1 12.2 78 24-105 8-96 (277)
375 cd05064 PTKc_EphR_A10 Catalyti 97.1 0.011 2.3E-07 50.7 12.2 75 27-105 10-93 (266)
376 cd06658 STKc_PAK5 Catalytic do 97.1 0.0037 8E-08 54.6 9.4 76 26-105 26-106 (292)
377 KOG0577 Serine/threonine prote 97.1 0.00067 1.5E-08 63.3 4.6 160 8-233 12-182 (948)
378 cd07878 STKc_p38beta_MAPK11 Ca 97.1 0.0058 1.3E-07 54.6 10.6 27 197-223 137-163 (343)
379 cd06647 STKc_PAK_I Catalytic d 97.1 0.0097 2.1E-07 51.9 11.7 77 25-105 22-103 (293)
380 cd05075 PTKc_Axl Catalytic dom 97.0 0.0063 1.4E-07 52.1 10.2 75 28-105 5-93 (272)
381 cd07865 STKc_CDK9 Catalytic do 97.0 0.008 1.7E-07 52.5 11.0 74 26-102 16-103 (310)
382 cd06645 STKc_MAP4K3 Catalytic 97.0 0.0078 1.7E-07 51.4 10.7 75 27-105 14-93 (267)
383 cd05092 PTKc_TrkA Catalytic do 97.0 0.0053 1.1E-07 53.1 9.7 78 24-105 7-94 (280)
384 cd05111 PTK_HER3 Pseudokinase 97.0 0.015 3.2E-07 50.3 12.5 27 197-223 128-154 (279)
385 cd05076 PTK_Tyk2_rpt1 Pseudoki 97.0 0.0074 1.6E-07 52.1 10.4 55 47-105 46-103 (274)
386 cd07849 STKc_ERK1_2_like Catal 97.0 0.0095 2.1E-07 53.1 11.3 74 26-102 9-92 (336)
387 cd05040 PTKc_Ack_like Catalyti 97.0 0.012 2.7E-07 49.8 11.6 72 29-105 2-82 (257)
388 cd05091 PTKc_Ror2 Catalytic do 97.0 0.0041 8.8E-08 53.8 8.4 74 27-104 10-94 (283)
389 cd07829 STKc_CDK_like Catalyti 97.0 0.0077 1.7E-07 51.8 10.1 71 28-102 5-82 (282)
390 cd07880 STKc_p38gamma_MAPK12 C 97.0 0.012 2.6E-07 52.7 11.5 78 23-100 16-102 (343)
391 cd07866 STKc_BUR1 Catalytic do 96.9 0.0084 1.8E-07 52.4 10.3 74 26-102 12-99 (311)
392 cd08216 PK_STRAD Pseudokinase 96.9 0.0077 1.7E-07 52.9 10.0 27 197-223 120-146 (314)
393 KOG1151 Tousled-like protein k 96.9 0.0034 7.5E-08 56.7 7.5 73 30-105 471-555 (775)
394 cd05576 STKc_RPK118_like Catal 96.9 0.0086 1.9E-07 50.4 9.9 27 197-223 104-130 (237)
395 KOG0587 Traf2- and Nck-interac 96.9 0.019 4E-07 56.1 12.8 74 28-103 25-106 (953)
396 cd06634 STKc_TAO2 Catalytic do 96.9 0.0076 1.7E-07 53.0 9.8 76 24-103 17-100 (308)
397 PHA02988 hypothetical protein; 96.9 0.011 2.4E-07 51.4 10.4 75 28-105 26-109 (283)
398 cd07864 STKc_CDK12 Catalytic d 96.8 0.0091 2E-07 52.0 9.7 73 27-102 12-100 (302)
399 PHA03210 serine/threonine kina 96.8 0.0045 9.8E-08 58.5 8.1 27 197-223 286-312 (501)
400 cd05110 PTKc_HER4 Catalytic do 96.8 0.016 3.4E-07 50.8 10.9 76 24-104 9-94 (303)
401 cd05032 PTKc_InsR_like Catalyt 96.8 0.019 4.2E-07 49.2 11.3 76 26-105 10-96 (277)
402 cd07856 STKc_Sty1_Hog1 Catalyt 96.8 0.016 3.5E-07 51.5 11.0 74 26-102 14-94 (328)
403 KOG0607 MAP kinase-interacting 96.8 0.0045 9.8E-08 53.8 7.0 64 47-123 105-171 (463)
404 cd07852 STKc_MAPK15 Catalytic 96.8 0.013 2.8E-07 52.2 10.3 73 28-102 13-93 (337)
405 KOG0591 NIMA (never in mitosis 96.8 0.0009 2E-08 57.0 2.4 71 28-104 25-106 (375)
406 cd07857 STKc_MPK1 Catalytic do 96.7 0.014 3.1E-07 51.8 10.3 73 28-102 6-90 (332)
407 PF07714 Pkinase_Tyr: Protein 96.7 0.015 3.2E-07 49.8 10.0 75 27-105 4-88 (259)
408 smart00220 S_TKc Serine/Threon 96.7 0.0096 2.1E-07 49.5 8.7 66 36-105 3-74 (244)
409 KOG0032 Ca2+/calmodulin-depend 96.7 0.015 3.4E-07 52.8 10.4 75 28-105 41-123 (382)
410 KOG0197 Tyrosine kinases [Sign 96.7 0.0085 1.8E-07 55.0 8.6 143 27-231 211-358 (468)
411 COG2112 Predicted Ser/Thr prot 96.7 0.0033 7.1E-08 50.3 5.1 72 27-105 27-99 (201)
412 cd07858 STKc_TEY_MAPK_plant Ca 96.7 0.014 2.9E-07 52.1 9.8 74 26-102 9-93 (337)
413 cd05058 PTKc_Met_Ron Catalytic 96.7 0.032 6.9E-07 47.4 11.6 27 197-223 117-143 (262)
414 KOG1164 Casein kinase (serine/ 96.6 0.026 5.6E-07 50.2 11.2 75 26-100 22-103 (322)
415 cd05078 PTK_Jak2_Jak3_rpt1 Pse 96.6 0.0091 2E-07 50.9 7.8 74 28-105 1-86 (258)
416 cd05043 PTK_Ryk Pseudokinase d 96.6 0.037 8E-07 47.6 11.6 75 27-104 11-95 (280)
417 KOG4236 Serine/threonine prote 96.5 0.021 4.6E-07 52.9 9.7 69 28-103 570-648 (888)
418 PLN00113 leucine-rich repeat r 96.5 0.022 4.8E-07 58.3 10.8 73 28-105 696-770 (968)
419 KOG0588 Serine/threonine prote 96.5 0.014 3.1E-07 55.3 8.5 73 29-105 19-99 (786)
420 KOG1167 Serine/threonine prote 96.4 0.016 3.5E-07 51.9 8.3 78 23-103 37-120 (418)
421 KOG0582 Ste20-like serine/thre 96.4 0.038 8.3E-07 50.2 10.6 70 28-103 32-109 (516)
422 PLN03224 probable serine/threo 96.4 0.052 1.1E-06 51.3 12.2 27 197-223 328-354 (507)
423 KOG0586 Serine/threonine prote 96.4 0.029 6.3E-07 52.6 10.0 72 28-103 62-140 (596)
424 KOG0659 Cdk activating kinase 96.4 0.033 7.2E-07 47.3 9.4 37 196-232 119-157 (318)
425 KOG1094 Discoidin domain recep 96.3 0.0092 2E-07 55.8 6.2 86 15-105 532-622 (807)
426 cd07879 STKc_p38delta_MAPK13 C 96.3 0.058 1.3E-06 48.2 11.5 75 24-101 17-103 (342)
427 cd07854 STKc_MAPK4_6 Catalytic 96.2 0.046 9.9E-07 48.8 10.4 79 21-102 4-100 (342)
428 cd07851 STKc_p38 Catalytic dom 96.2 0.037 8E-07 49.5 9.7 27 197-223 137-163 (343)
429 KOG1166 Mitotic checkpoint ser 96.2 0.014 3.1E-07 58.4 7.4 81 22-105 697-781 (974)
430 KOG1152 Signal transduction se 96.1 0.062 1.3E-06 50.5 10.5 140 24-223 563-715 (772)
431 KOG2052 Activin A type IB rece 96.1 0.14 3E-06 46.7 12.3 77 23-103 212-294 (513)
432 KOG0193 Serine/threonine prote 96.1 0.038 8.3E-07 52.0 9.0 136 23-223 393-533 (678)
433 cd07877 STKc_p38alpha_MAPK14 C 96.1 0.12 2.6E-06 46.2 12.3 27 197-223 139-165 (345)
434 PLN03225 Serine/threonine-prot 96.0 0.054 1.2E-06 52.1 10.1 27 197-223 274-301 (566)
435 KOG2345 Serine/threonine prote 96.0 0.012 2.5E-07 49.5 4.7 141 27-224 26-175 (302)
436 PF10707 YrbL-PhoP_reg: PhoP r 95.9 0.17 3.7E-06 41.6 11.4 76 26-103 5-102 (199)
437 cd08222 STKc_Nek11 Catalytic d 95.8 0.051 1.1E-06 46.1 8.2 74 28-105 6-89 (260)
438 KOG0593 Predicted protein kina 95.7 0.064 1.4E-06 46.5 7.9 146 27-236 7-164 (396)
439 KOG0694 Serine/threonine prote 95.0 0.17 3.6E-06 48.4 9.2 133 27-223 373-513 (694)
440 KOG2269 Serine/threonine prote 95.0 0.057 1.2E-06 47.6 5.7 36 62-103 333-368 (531)
441 KOG0597 Serine-threonine prote 95.0 0.11 2.5E-06 48.7 7.9 69 28-102 8-85 (808)
442 KOG0984 Mitogen-activated prot 94.9 0.015 3.2E-07 47.7 1.9 28 196-223 167-194 (282)
443 KOG0611 Predicted serine/threo 94.9 0.047 1E-06 49.2 5.1 72 28-105 59-140 (668)
444 KOG0658 Glycogen synthase kina 94.9 0.021 4.5E-07 50.4 2.9 48 24-72 26-75 (364)
445 KOG1165 Casein kinase (serine/ 94.8 0.29 6.3E-06 43.2 9.5 52 45-100 53-106 (449)
446 PHA02882 putative serine/threo 94.8 0.032 6.9E-07 48.7 3.8 27 197-223 145-171 (294)
447 PF10009 DUF2252: Uncharacteri 94.7 0.037 8E-07 50.4 3.9 58 194-252 40-119 (385)
448 KOG0584 Serine/threonine prote 94.4 0.18 3.9E-06 47.7 7.9 43 176-221 146-189 (632)
449 KOG0603 Ribosomal protein S6 k 94.4 0.047 1E-06 51.5 4.0 27 197-223 434-461 (612)
450 KOG0589 Serine/threonine prote 94.1 0.25 5.3E-06 45.3 7.9 73 27-105 9-91 (426)
451 KOG0983 Mitogen-activated prot 93.4 0.056 1.2E-06 46.2 2.4 28 195-222 209-236 (391)
452 cd05124 AFK Actin-Fragmin Kina 93.3 0.34 7.3E-06 40.5 6.7 73 27-105 4-104 (238)
453 KOG4721 Serine/threonine prote 93.0 0.2 4.3E-06 47.2 5.5 71 23-103 125-197 (904)
454 KOG0580 Serine/threonine prote 92.8 0.15 3.4E-06 42.7 4.0 72 28-103 28-107 (281)
455 KOG1035 eIF-2alpha kinase GCN2 92.0 0.15 3.4E-06 51.8 3.7 50 24-73 481-536 (1351)
456 KOG0599 Phosphorylase kinase g 92.0 0.15 3.2E-06 43.7 3.0 53 178-235 128-184 (411)
457 PHA00451 protein kinase 91.9 0.12 2.7E-06 43.8 2.5 37 198-234 189-225 (362)
458 PF07387 Seadorna_VP7: Seadorn 91.6 0.12 2.7E-06 43.1 2.1 30 195-224 160-189 (308)
459 PF09192 Act-Frag_cataly: Acti 91.4 1 2.2E-05 38.8 7.5 77 23-105 26-135 (275)
460 KOG1006 Mitogen-activated prot 91.4 0.12 2.6E-06 44.1 1.8 28 196-223 186-213 (361)
461 KOG4278 Protein tyrosine kinas 91.0 1.2 2.6E-05 42.7 8.2 149 23-233 268-423 (1157)
462 cd05074 PTKc_Tyro3 Catalytic d 90.3 0.34 7.3E-06 41.3 3.8 27 197-223 132-158 (273)
463 PLN00181 protein SPA1-RELATED; 90.3 0.38 8.2E-06 48.3 4.6 26 197-222 99-124 (793)
464 KOG0670 U4/U6-associated splic 90.0 0.42 9.1E-06 44.6 4.2 33 196-228 554-589 (752)
465 KOG4158 BRPK/PTEN-induced prot 89.4 0.36 7.9E-06 43.6 3.2 35 196-230 359-397 (598)
466 KOG0664 Nemo-like MAPK-related 89.2 0.45 9.8E-06 40.8 3.5 28 196-223 174-201 (449)
467 KOG0665 Jun-N-terminal kinase 88.7 0.32 7E-06 42.5 2.4 28 196-223 136-163 (369)
468 KOG0660 Mitogen-activated prot 88.5 0.5 1.1E-05 41.8 3.4 32 196-227 143-175 (359)
469 PF14531 Kinase-like: Kinase-l 88.0 0.3 6.6E-06 42.5 1.9 36 196-231 163-200 (288)
470 KOG0194 Protein tyrosine kinas 87.9 5.1 0.00011 37.5 9.8 138 28-228 163-313 (474)
471 COG4320 Uncharacterized protei 87.6 1.3 2.8E-05 38.7 5.3 61 194-254 55-136 (410)
472 KOG0604 MAP kinase-activated p 87.3 0.85 1.8E-05 39.8 4.1 75 25-103 65-144 (400)
473 KOG0199 ACK and related non-re 86.3 0.79 1.7E-05 44.5 3.6 138 23-223 111-257 (1039)
474 KOG1290 Serine/threonine prote 84.5 7.6 0.00017 36.3 8.9 48 27-74 83-134 (590)
475 KOG1026 Nerve growth factor re 84.5 3.4 7.4E-05 40.7 7.1 78 23-104 487-575 (774)
476 PF07805 HipA_N: HipA-like N-t 84.5 5 0.00011 27.5 6.2 52 47-101 28-80 (81)
477 KOG1095 Protein tyrosine kinas 83.6 9.2 0.0002 39.2 9.8 79 23-105 693-782 (1025)
478 KOG0661 MAPK related serine/th 81.7 2 4.4E-05 39.7 4.1 56 176-236 113-172 (538)
479 KOG1236 Predicted unusual prot 81.5 0.73 1.6E-05 42.1 1.2 25 197-221 364-392 (565)
480 COG5072 ALK1 Serine/threonine 79.6 5.3 0.00012 36.2 5.9 29 195-224 339-367 (488)
481 KOG0662 Cyclin-dependent kinas 79.3 1.2 2.7E-05 35.8 1.7 73 26-102 6-85 (292)
482 KOG0669 Cyclin T-dependent kin 78.3 4.3 9.3E-05 34.7 4.7 28 196-223 142-169 (376)
483 KOG4279 Serine/threonine prote 77.9 29 0.00063 34.3 10.5 72 30-105 583-659 (1226)
484 KOG0666 Cyclin C-dependent kin 77.4 1.6 3.6E-05 38.3 2.0 72 28-102 30-112 (438)
485 KOG0579 Ste20-like serine/thre 76.6 1.4 3.1E-05 42.3 1.6 27 196-222 148-174 (1187)
486 smart00146 PI3Kc Phosphoinosit 76.0 2.2 4.7E-05 35.2 2.4 29 197-225 101-129 (202)
487 PF03109 ABC1: ABC1 family; I 74.4 1.8 3.9E-05 32.4 1.4 46 28-73 17-63 (119)
488 KOG0590 Checkpoint kinase and 74.4 4 8.7E-05 39.6 4.1 28 196-223 438-465 (601)
489 cd05172 PIKKc_DNA-PK DNA-depen 74.0 2.4 5.2E-05 35.9 2.2 32 196-227 135-167 (235)
490 cd05170 PIKKc_SMG1 Suppressor 71.1 3 6.5E-05 36.8 2.2 33 195-227 207-240 (307)
491 cd00142 PI3Kc_like Phosphoinos 69.1 3.5 7.6E-05 34.4 2.1 29 197-225 128-157 (219)
492 cd05171 PIKKc_ATM Ataxia telan 69.0 3.6 7.7E-05 35.8 2.2 32 195-226 179-211 (279)
493 cd00892 PIKKc_ATR ATR (Ataxia 69.0 3.6 7.8E-05 34.8 2.2 32 196-227 138-170 (237)
494 cd05168 PI4Kc_III_beta Phospho 68.6 3.5 7.7E-05 36.1 2.1 31 196-226 140-170 (293)
495 cd00891 PI3Kc Phosphoinositide 68.4 3.3 7.2E-05 37.3 1.9 32 196-227 202-233 (352)
496 cd05169 PIKKc_TOR TOR (Target 68.2 3.1 6.8E-05 36.2 1.7 31 195-225 179-210 (280)
497 cd05164 PIKKc Phosphoinositide 67.3 3.9 8.6E-05 34.2 2.1 30 196-225 130-160 (222)
498 KOG1240 Protein kinase contain 66.6 2.9 6.2E-05 42.9 1.3 43 11-55 14-56 (1431)
499 cd00893 PI4Kc_III Phosphoinosi 65.7 4.5 9.7E-05 35.4 2.1 30 196-225 138-167 (289)
500 PF13575 DUF4135: Domain of un 65.5 4.3 9.2E-05 36.9 2.1 26 202-228 153-178 (370)
No 1
>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []. Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.
Probab=100.00 E-value=9.6e-52 Score=356.69 Aligned_cols=283 Identities=46% Similarity=0.792 Sum_probs=211.9
Q ss_pred cchHHHHHHhc-CCCcceeeeeeeCCccccceEEEEeCCccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCCccceeec
Q 022304 8 DDPIREWILSE-GKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVG 86 (299)
Q Consensus 8 ~~~i~~~l~~~-~~~~~~~~~~~~~~G~~n~~y~v~~~~g~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~ 86 (299)
++.|.+.|++. +.+.+|.++++++||..|.+|++++++++||||+........++.|++.|+.|++..++.||+|+..+
T Consensus 2 w~~i~~~~~~~~~~~~~i~~~~~v~GG~i~~a~~~~~~~~~~FvK~~~~~~~~~f~~Ea~gL~~L~~~~~~~vP~vi~~G 81 (288)
T PF03881_consen 2 WQAIEQQISEQLGADFKITSIEPVSGGDINEAYRLDTDGGSYFVKVNSESGRDMFEGEAEGLKALAEANPIRVPKVIAWG 81 (288)
T ss_dssp HHHHHHHHHHHHTS-----EEEEE--SSSSEEEEEETTS-EEEEEEEEGGGCCHHHHHHHHHHHHCHTTTSBS--EEEEE
T ss_pred hHHHHHHHHHHhCCCCceeeeEecCCCChhheEEEECCCccEEEEecChhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEE
Confidence 56788999888 55567999999999999999999988889999999865567799999999999877789999999998
Q ss_pred ccCCCceEEEEecccCCCC-CCcHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCCCCHHHHHHHhhhHHHHHH
Q 022304 87 ALPTGGSYIIMEFIEFGSS-RGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKL 165 (299)
Q Consensus 87 ~~~~~~~~~v~e~l~G~~~-~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (299)
.. .+..|++|||++.... +..++++|+.||+||+... .+.|||+.++++|..|+.|.|..+|.+||.++|+.++++.
T Consensus 82 ~~-~~~~fLlle~l~~~~~~~~~~~~lg~~LA~LH~~~~-~~~FGf~~~~~~G~~~q~N~w~~~W~~Ff~~~RL~~~l~~ 159 (288)
T PF03881_consen 82 EY-DDDAFLLLEFLEMGSPSPPDWEELGRQLAALHQWSP-AGKFGFPVDTYIGSLPQPNTWTDSWEEFFAEQRLRPQLEL 159 (288)
T ss_dssp E--SSCCEEEEE--------CCHHHHHHHHHHHHHH-T---SSBB-SS-EEETTEEE----BS-HHHHHHHHCCHHHHHH
T ss_pred ee-cCCceEEEEeecCCCCCchhHHHHHHHHHHHhhhcC-CCCcCCCcCCcccCcCCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 76 5667999999998833 4789999999999999332 2569999999999999999999999999998889998887
Q ss_pred HHhhcCChHHHHHHHHHHHHHhccccCCCCCcceeccCCCCCCeeecCCCCeEEEccccccCCchhhhhhh-hhcCCChh
Q 022304 166 ALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFGMS-WCAGFGGS 244 (299)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~liHgDl~~~Nvl~~~~~~~~iID~~~~~g~~~~Dla~~-~~~~~~~~ 244 (299)
+.+.+.. ...++++.+++...+.....+|+|+|||||+||++++.++.+.|||+.+++||+++|||++ ++++|+++
T Consensus 160 ~~~~~~~---~~~~~~l~~~~~~~l~~~~~~PsLlHGDLW~GN~~~~~~g~p~l~DPa~yygh~E~DLam~~lfggf~~~ 236 (288)
T PF03881_consen 160 AREKGGL---DAELERLVERLPSLLPGREPKPSLLHGDLWSGNVGFDADGEPVLFDPACYYGHREVDLAMTRLFGGFPDE 236 (288)
T ss_dssp HHHCTSS----CHHHHHHHHHHHCCTTS----EEE-SS-SGGGEEEETTE-EEE-S---EEE-CHHHHHHHCCCSTTHHH
T ss_pred HHhhCCc---hhHHHHHHHHHHHHhcCCCCCceeeEcCccccceeecCCCCceeeccccccCchHhhhhhhhhhCCCCHH
Confidence 7765543 2345566677776666555788999999999999999988899999999999999999987 56889999
Q ss_pred hHHHhhhhCCCCCCHHHHHHHHHHHHHHHHHHhhCcccHHHHHHHHHHHHH
Q 022304 245 FYNSYFEVMPKQPGFEKRRDLYMLYHYLNHYNLFGSGYRSSALSIIDDYLR 295 (299)
Q Consensus 245 f~~~Y~~~~~l~~~~~~r~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~ 295 (299)
|+++|.++.|++++|.+|..+|+|++.|+|...||.+|..+.+++|++|++
T Consensus 237 f~~~Y~~~~Pl~~g~~~R~~lY~Ly~lL~H~~lFG~~Y~~~~~~~l~~ll~ 287 (288)
T PF03881_consen 237 FYDAYQEHYPLSEGWEDRNPLYQLYHLLNHLNLFGGSYRSQVRRILKRLLS 287 (288)
T ss_dssp HHHHHHHHS---TTHHHHHHHHHHHHHHHHHHHC-GCHHHHHHHHHHHHHT
T ss_pred HHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHhh
Confidence 999999999999999999999999999999999999999999999999986
No 2
>COG3001 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=100.00 E-value=2.2e-50 Score=325.61 Aligned_cols=281 Identities=39% Similarity=0.682 Sum_probs=252.9
Q ss_pred cchHHHHHHhc-CCCcceeeeeeeCCccccceEEEEeCCccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCCccceeec
Q 022304 8 DDPIREWILSE-GKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVG 86 (299)
Q Consensus 8 ~~~i~~~l~~~-~~~~~~~~~~~~~~G~~n~~y~v~~~~g~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~ 86 (299)
++.|.+.|+++ |.+ +|...+++.||..|..|+|..+..+||+|.+.......+.+|++-|+.|+....+.||+|+..+
T Consensus 2 w~~i~~qlse~~g~~-~i~er~~v~gG~inea~~v~dg~~~~FvK~n~~~~~~~f~AEa~gL~~la~s~ti~VP~vi~~G 80 (286)
T COG3001 2 WQAISQQLSEQLGEG-EIKEREEVSGGDINEAWRLRDGTDPFFVKCNQREQLSMFTAEADGLELLARSNTITVPKVIAVG 80 (286)
T ss_pred hHHHHHHHHHHhCch-hhhcccccCCccccceeEeecCCcceEEEecchhhHHHHHHHHHHHHHHHhcCCccccceEEec
Confidence 56788888888 555 8889999999999999999988889999999876566789999999999987669999999998
Q ss_pred ccCCCceEEEEecccCCCCC-CcHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCCCCHHHHHHHhhhHHHHHH
Q 022304 87 ALPTGGSYIIMEFIEFGSSR-GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKL 165 (299)
Q Consensus 87 ~~~~~~~~~v~e~l~G~~~~-~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (299)
.. .+..|+||+|++-.++. ..++++|..||+||+...+. .|||.-++.+|+.+++|.|.++|..||.+.|+..+++.
T Consensus 81 ~~-~~~sylVle~L~~~~~d~~~~~~~GqqLA~LH~~~~~~-~fG~d~dn~iG~t~QpN~W~~~Wa~FfaeqRig~qlql 158 (286)
T COG3001 81 AS-RDHSYLVLEYLPTGPLDAHSAFILGQQLARLHQWGGQA-QFGLDFDNYIGTTPQPNTWQRRWATFFAEQRIGWQLQL 158 (286)
T ss_pred CC-CCeeEEEEeeccCCCCCchhHHHHHHHHHHHHhhcCcc-ccCcccccccCCCCCCCCCcchHHHHHHHhhhhHHHHH
Confidence 76 67899999999987774 57899999999999999864 69999999999999999999999999999999999988
Q ss_pred HHhhcCChHHHHHHHHHHHHHhccccCCCCCcceeccCCCCCCeeecCCCCeEEEccccccCCchhhhhhh-hhcCCChh
Q 022304 166 ALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFGMS-WCAGFGGS 244 (299)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~liHgDl~~~Nvl~~~~~~~~iID~~~~~g~~~~Dla~~-~~~~~~~~ 244 (299)
+.+.+.+-. .++.+++++.+++.++++.|+|+|||||.+|..+..+| +.|+|+.|.+||++.|||++ .+++|+.+
T Consensus 159 ar~rg~~f~---did~~~~~v~elL~~hqpqPsLlHGDLW~gN~a~~~~G-Pv~fDPA~y~GDrE~Dlam~elFggfp~e 234 (286)
T COG3001 159 ARERGLTFG---DIDAIVEKIQELLADHQPQPSLLHGDLWSGNCAFGKDG-PVIFDPACYWGDRECDLAMLELFGGFPPE 234 (286)
T ss_pred HHHhCCCcc---CHHHHHHHHHHHHhcCCCCcceeecccccccccccCCC-CeeeccccccCCcccceehhhhhcCCcHH
Confidence 887765422 23566777777888777889999999999999999998 99999999999999999998 56899999
Q ss_pred hHHHhhhhCCCCCCHHHHHHHHHHHHHHHHHHhhCcccHHHHHHHHHHHHH
Q 022304 245 FYNSYFEVMPKQPGFEKRRDLYMLYHYLNHYNLFGSGYRSSALSIIDDYLR 295 (299)
Q Consensus 245 f~~~Y~~~~~l~~~~~~r~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~ 295 (299)
|++||.++.|++.++.+|..+|+|+..++|...||+.|.+.+..+|++.++
T Consensus 235 fy~gY~sv~PL~~G~~eRk~iYqLY~llnh~~~FGg~Y~~~a~k~i~~iL~ 285 (286)
T COG3001 235 FYDGYQSVSPLPAGYLERKPIYQLYHLLNHANLFGGHYLVEAQKSIDRILS 285 (286)
T ss_pred HHHhhhccCCCCCchHHHhHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999999999875
No 3
>KOG3021 consensus Predicted kinase [General function prediction only]
Probab=100.00 E-value=4.9e-46 Score=296.93 Aligned_cols=287 Identities=48% Similarity=0.868 Sum_probs=251.6
Q ss_pred HHHHHhcCCCcceeeeeeeCCccccceEEEEeCCccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCCccceeecccCCC
Q 022304 12 REWILSEGKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTG 91 (299)
Q Consensus 12 ~~~l~~~~~~~~~~~~~~~~~G~~n~~y~v~~~~g~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~ 91 (299)
.++|.....-.++..+-.+++|+.|..--.+|+.|++|||.+++..+..++.|.+.|+.+.+...+.||+|+...+...|
T Consensus 2 ee~l~ael~~~~vr~~gs~gggcI~~~r~ydtDaG~~FvK~nr~~~~~mfeGE~~sLeAi~sT~tv~vprpikvid~p~G 81 (313)
T KOG3021|consen 2 EELLRAELGLNNVRALGSVGGGCISDGRHYDTDAGKVFVKVNRSIARDMFEGELASLEAIQSTETVLVPRPIKVIDLPGG 81 (313)
T ss_pred hHHHHHhcCcceeeeecCCCCceeccccccccCCccEEEEeccccchHHHhhHHHHHHHHHhcCceecCCceeeEecCCC
Confidence 35565551222566666778888887767788899999999988667889999999999998777899999998776568
Q ss_pred ceEEEEecccCCCCCCcHHHHHHHHHHHH------------hcCCCC-----------CCCCCCCCCcccccccCCCCCC
Q 022304 92 GSYIIMEFIEFGSSRGNQSVFGKKLAEMH------------KAGKSS-----------KGFGFDVDNTIGSTPQINKWTS 148 (299)
Q Consensus 92 ~~~~v~e~l~G~~~~~~~~~lg~~La~lH------------~~~~~~-----------~~~~~~~~~~~g~~~~~~~~~~ 148 (299)
..+++||+++-..+..++..+|+.||.|| ....-. .-|||...+++|.+||.|.|.+
T Consensus 82 gs~lime~idf~~lr~~~a~lG~qlAdmHl~n~kl~e~r~~~~~tv~rgge~~e~~~v~~FGF~v~tccG~lpQvNdW~e 161 (313)
T KOG3021|consen 82 GSSLIMEHIDFQGLRSDAAKLGSQLADMHLKNEKLAEARRTEAGTVGRGGEEGEQIGVENFGFHVVTCCGRLPQVNDWQE 161 (313)
T ss_pred ceeeeeehhhcccchhHHHHHHHHHHHHhhhhHHHHHHHHHhccccccCcccccccchhccceeeeeecccCcccccchh
Confidence 89999999999988889999999999999 222211 1289999999999999999999
Q ss_pred CHHHHHHHhhhHHHHHHHHhhcCChHHHHHHHHHHHHHhccccCCCCCcceeccCCCCCCeeecCCCCeEEEccccccCC
Q 022304 149 NWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGH 228 (299)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~liHgDl~~~Nvl~~~~~~~~iID~~~~~g~ 228 (299)
+|.+|+...|+.++++.+.+...+.+..+....+..+++.++.+...-|+|+|||+|.|||--|+.++|.|+|+...||+
T Consensus 162 dW~eFf~rhRlq~Qldl~~~~~~Dre~~el~~~L~~kia~Lf~~~eI~PaLlHGDLW~GNva~D~~~ePiIfDPasfYgh 241 (313)
T KOG3021|consen 162 DWEEFFARHRLQPQLDLLEKTYGDREAFELWSILQTKIADLFKCLEILPALLHGDLWSGNVAEDGAGEPIIFDPASFYGH 241 (313)
T ss_pred hHHHHHHHHhhhHHHHHHHHhhccHHHHHHHHHHHHhhHHHhccceeehhhhccccccCcccccCCCCceEeCchhhcCC
Confidence 99999998899999998888878877788888888888999988778899999999999999888888999999999999
Q ss_pred chhhhhhh-hhcCCChhhHHHhhhhCCCCCCHHHHHHHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHHhc
Q 022304 229 NEAEFGMS-WCAGFGGSFYNSYFEVMPKQPGFEKRRDLYMLYHYLNHYNLFGSGYRSSALSIIDDYLRMLK 298 (299)
Q Consensus 229 ~~~Dla~~-~~~~~~~~f~~~Y~~~~~l~~~~~~r~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (299)
+++|++++ ++++|++.|+.+|.+..|-.+++.+|+.+|+|+..|+||..||.+|+.+...+|+.|+++++
T Consensus 242 ~Efefgia~mfGgf~~sF~naY~k~ipka~G~eqR~~LYqLyhyLNHwNhFGs~YRs~sl~i~~n~lk~~~ 312 (313)
T KOG3021|consen 242 SEFEFGIAKMFGGFTQSFYNAYHKKIPKAPGFEQRLLLYQLYHYLNHWNHFGSGYRSSSLDIMRNLLKNCY 312 (313)
T ss_pred cHHHHHHHHHhCCCcHHHHHHHhhhcCCCCcHHHHHHHHHHHHHhhhhhhhccccccchhHHHHHHHHHhc
Confidence 99999987 56889999999999999999999999999999999999999999999999999999999886
No 4
>PRK10593 hypothetical protein; Provisional
Probab=100.00 E-value=8.1e-40 Score=286.21 Aligned_cols=277 Identities=18% Similarity=0.190 Sum_probs=217.2
Q ss_pred chHHHHHHhcCCCcceeeeeeeCCccccceEEEEeCCccEEEEecCCC-CcchHHHHHHHHHHHHhcCCCCCccceeecc
Q 022304 9 DPIREWILSEGKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRSI-GPSMFEGEALGLGAMYETRTIRAPRPFKVGA 87 (299)
Q Consensus 9 ~~i~~~l~~~~~~~~~~~~~~~~~G~~n~~y~v~~~~g~~vlK~~~~~-~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~ 87 (299)
+.|++.+.+. ++..+.+++++++|..+.+|++++.++++|+|+.... ....+..|++.+++|++.+.+|||+|+..+.
T Consensus 2 ~~~~~~~~~~-~~~~~~~~~~i~~G~~~~vy~~~~~~~~~~~k~~~~~~~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~ 80 (297)
T PRK10593 2 EQLRAELSHL-LGEKLSRVECISEQPYAALWALYDSQGNPMPLMARSFSTPGVAQQEAWKLSMLARSGTVRMPTVYGVMT 80 (297)
T ss_pred hHHHHHHHHH-hchhhheeeecCCccceeEEEEEcCCCCEEEEEecccccchHHHHHHHHHHHHccCCCCCcCcEEEEec
Confidence 4567777666 6669999999999999999999988889999997653 4567899999999999875699999998654
Q ss_pred cC--CCceEEEEecccCCCCC------C----cHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCCCCHHHHHH
Q 022304 88 LP--TGGSYIIMEFIEFGSSR------G----NQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYA 155 (299)
Q Consensus 88 ~~--~~~~~~v~e~l~G~~~~------~----~~~~lg~~La~lH~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 155 (299)
.. .|..+++||+++|.+.. . ...++++.|++||+... +|+ .|. ..+.|..+|..|+.
T Consensus 81 ~~~~~g~~~LVmE~i~G~~~~~~~~~~~~~~~l~~~l~~~La~LH~~~~----~g~-----~g~--~~~~~~~~w~~f~~ 149 (297)
T PRK10593 81 HEQSPGPDVLLLERLRGVSVEAPARTPERWEQLKDQIVEGLLAWHRIDS----RGC-----VGA--VDSTQENLWPSWYQ 149 (297)
T ss_pred cCCcCCCeEEEEeccCCEecCCCCCCHHHHHHHHHHHHHHHHHHhCCCh----hhc-----ccC--CCCcccccHHHHHH
Confidence 32 47799999999997641 1 13456799999999763 343 232 23456678888886
Q ss_pred HhhhHHHH---HHHHhhcCChHHHHHHHHHHHHHhccccCCCCCcceeccCCCCCCeeecCC-CC-eEEEccc-cccCCc
Q 022304 156 EHRLGYQL---KLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKN-GE-PVILDPA-CYYGHN 229 (299)
Q Consensus 156 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~liHgDl~~~Nvl~~~~-~~-~~iID~~-~~~g~~ 229 (299)
.++..+. +............+.+.++.+.+++.+...+.+++|||||||++||+++++ +. ++|||+. +.|||+
T Consensus 150 -~rl~~~~~~~~~~~~~~l~~~~~~~~~~l~~~l~~~L~~~~~~psLlHGDlw~gNvl~~~~~~~i~~liDPa~~~~g~r 228 (297)
T PRK10593 150 -QRVEVLWTTLNQFNNTGLTMQDRRILFRTRECLPALFEGFNDNCVLVHGNFTLRSMLKDPRSDQLLAMLNPGLMLWAPR 228 (297)
T ss_pred -HHHHHHHhhhhhccccCCChhHHHHHHHHHHhchhhhccCCCCCeeEeCCCCcccEEECCCCCceEEEECchHhCCCCH
Confidence 4554322 222222222222344455566666766654457899999999999999864 33 7899997 789999
Q ss_pred hhhhhhhhhcCCChhhHHHhhhhCCCCCCHHHHHHHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHHhc
Q 022304 230 EAEFGMSWCAGFGGSFYNSYFEVMPKQPGFEKRRDLYMLYHYLNHYNLFGSGYRSSALSIIDDYLRMLK 298 (299)
Q Consensus 230 ~~Dla~~~~~~~~~~f~~~Y~~~~~l~~~~~~r~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (299)
++|++++.+++|++.|+++|.+..|++++|++|..+|.||+.|+|...||.-+...++.+++.+++||.
T Consensus 229 E~DLa~~~~~~f~~~f~~~Y~~~~pl~~g~~~R~~ly~Ly~~l~h~~~fG~~~~~~~~~~~~~~~~~~~ 297 (297)
T PRK10593 229 EYELFRLMDNGLAEQLLWRYLQKAPVAESFIWRRWLYVLWDEVAQLVNTGRFDRRRFDLAAKSLLPWLA 297 (297)
T ss_pred HHhHHHhhcCCccHHHHHHHHHhCCCCccHHHHHHHHHHHHHHHHHHHhCccchhhHHHHHHHhccccC
Confidence 999998876889999999999999999999999999999999999999999998999999999999873
No 5
>PRK05231 homoserine kinase; Provisional
Probab=99.97 E-value=1.6e-28 Score=217.94 Aligned_cols=242 Identities=16% Similarity=0.161 Sum_probs=164.5
Q ss_pred cCCcchHHHHHHhcCCCcceeeeeeeCCccccceEEEEeCCccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCCcccee
Q 022304 5 ALSDDPIREWILSEGKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFK 84 (299)
Q Consensus 5 ~~~~~~i~~~l~~~~~~~~~~~~~~~~~G~~n~~y~v~~~~g~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~~~vP~~~~ 84 (299)
-++.+++.++|+.++.| ++.+++++.+|..|.+|+|++++|+||||++.......+..|.+++++|++. ++|||+|+.
T Consensus 6 ~ls~~~l~~~l~~y~~~-~~~~~~~l~~G~~n~~y~v~t~~g~~vLK~~~~~~~~~l~~~~~~l~~L~~~-glpvP~~i~ 83 (319)
T PRK05231 6 DVSDDELAAFLAPYDLG-ELLSLKGIAEGIENSNFFLTTTQGEYVLTLFERLTAEDLPFFLGLMQHLAAR-GVPVPAPVA 83 (319)
T ss_pred cCCHHHHHHHHHhcCCc-hhhccchhccccccceEEEEeCCCcEEEEEeccCChHHhHHHHHHHHHHHHC-CCCCCccee
Confidence 57889999999766654 8899999999999999999999999999998633345567789999999987 799999997
Q ss_pred ecccC-----CCceEEEEecccCCCCC----CcHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCCCCHHHHHH
Q 022304 85 VGALP-----TGGSYIIMEFIEFGSSR----GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYA 155 (299)
Q Consensus 85 ~~~~~-----~~~~~~v~e~l~G~~~~----~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 155 (299)
..+.. .|..+++++|++|.... ..++++|+.||+||.+... |+.+..+.. .+ ..|.+.+.
T Consensus 84 ~~~G~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~G~~LA~lH~~~~~---f~~~~~~~~-------~~-~~~~~~~~ 152 (319)
T PRK05231 84 RRDGAALGELAGKPAAIVTFLEGKWPRAPTAAHCAEVGEMLARMHLAGRD---FPLERPNLR-------GL-AWWRELAP 152 (319)
T ss_pred CCCCCEeeeeCCEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHhhhhc---CCccCCCCC-------Ch-HHHHHHHH
Confidence 65432 46789999999998652 3478999999999998853 432211110 00 11222211
Q ss_pred HhhhHHHHHHHHhhcCChHHHHHHHHHHHHHhccccCCCCCcceeccCCCCCCeeecCCCCeEEEcc-ccccCCchhhhh
Q 022304 156 EHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDP-ACYYGHNEAEFG 234 (299)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~liHgDl~~~Nvl~~~~~~~~iID~-~~~~g~~~~Dla 234 (299)
. +...+.... ...+.+.+..+.+.+...... ..+.++||||+|++|||+++++..+|||| ++++|++.+|+|
T Consensus 153 ~--~~~~~~~~~----~~~l~~~~~~~~~~~~~~~~~-~lp~~liHgD~~~~Nil~~~~~~~~iIDf~~~~~~~~~~DlA 225 (319)
T PRK05231 153 R--LLPFLADEQ----AALLEAELAAQLAFLASAAWP-ALPRGVIHADLFRDNVLFEGDRLSGFIDFYFACNDKLLYDVA 225 (319)
T ss_pred H--HhhccChhH----HHHHHHHHHHHHHhhhccccc-cCCcccCCCCCCCCcEEEECCceEEEEecccccCCchHHHHH
Confidence 1 111110000 011122233333333211111 25779999999999999987765699999 588999999999
Q ss_pred hhh---h----cCCC----hhhHHHhhhhCCCCCCHHHHHHHH
Q 022304 235 MSW---C----AGFG----GSFYNSYFEVMPKQPGFEKRRDLY 266 (299)
Q Consensus 235 ~~~---~----~~~~----~~f~~~Y~~~~~l~~~~~~r~~~~ 266 (299)
.+. + ..++ .+|++||.+.+|++++..+.+..+
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~l~gY~~~~~Ls~~E~~~l~~~ 268 (319)
T PRK05231 226 ITLNDWCFEADGSLDATKARALLAAYQSVRPLTAAERAALPVM 268 (319)
T ss_pred HHHHHHHccCCCCcCHHHHHHHHHHHhhcCCCCHHHHHHHHHH
Confidence 752 2 1122 579999999999987544444433
No 6
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=99.96 E-value=2.9e-28 Score=214.05 Aligned_cols=235 Identities=14% Similarity=0.163 Sum_probs=166.9
Q ss_pred chHHHHHHhcCCCcceeeeeeeCCccccceEEEEeCCccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCCccceeeccc
Q 022304 9 DPIREWILSEGKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGAL 88 (299)
Q Consensus 9 ~~i~~~l~~~~~~~~~~~~~~~~~G~~n~~y~v~~~~g~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~ 88 (299)
+++..++++++.+ ++.+++++.+|.+|.+|++.+++++||+|+++......+..|++++++|++. +++||+|+.....
T Consensus 2 ~~l~~~l~~y~~~-~~~~i~~i~~G~~n~~y~v~~~~~~~vLr~~~~~~~~~~~~e~~~l~~L~~~-g~~vp~~i~~~~g 79 (296)
T cd05153 2 EELASFLADYDLG-ELLSFEGISAGIENTNYFVTTDSGRYVLTLFEKVSAEELPFFLALLDHLAER-GLPVPRPIADRDG 79 (296)
T ss_pred HHHHHHHHHcCCC-chhheecccCccccceEEEEeCCCcEEEEEcCCCChHhccHHHHHHHHHHHC-CCCCCccccCCCC
Confidence 6788999888655 7889999999999999999999899999998764455678899999999886 6999999986543
Q ss_pred C-----CCceEEEEecccCCCCC----CcHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCCCCHHHHHHHhhh
Q 022304 89 P-----TGGSYIIMEFIEFGSSR----GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRL 159 (299)
Q Consensus 89 ~-----~~~~~~v~e~l~G~~~~----~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 159 (299)
. .+..+++++|++|..+. ....++|+.|++||..... |....+ . .-...|...... +.
T Consensus 80 ~~~~~~~~~~~~l~~~i~G~~~~~~~~~~~~~lg~~La~lH~~~~~---~~~~~~-------~--~~~~~~~~~~~~-~~ 146 (296)
T cd05153 80 EYLSELAGKPAALVEFLAGEHLTRPTAAHCRQIGEALARLHLAAQS---FPGERN-------N--LRGLAWIRELGK-DL 146 (296)
T ss_pred cEeeeeCCceEEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHhcc---CCccCC-------C--cCCcHHHHHHHH-Hh
Confidence 2 46789999999998763 3578999999999999853 221100 0 011234322111 01
Q ss_pred HHHHHHHHhhcCChHHHHHHHHHHHHHhccccCCCCCcceeccCCCCCCeeecCCCCeEEEccc-cccCCchhhhhhhh-
Q 022304 160 GYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA-CYYGHNEAEFGMSW- 237 (299)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~liHgDl~~~Nvl~~~~~~~~iID~~-~~~g~~~~Dla~~~- 237 (299)
.. .........+++.++.+...... ..+.++||||+|++|||+++++.++||||+ +++|++++|++.+.
T Consensus 147 ~~--------~l~~~~~~~~~~~~~~l~~~~~~-~~~~~l~HgD~~~~Nil~~~~~~~~iIDfe~a~~g~~~~Dla~~~~ 217 (296)
T cd05153 147 LP--------LLSAEDRALLADELARQDAFDPS-DLPRGVIHADLFRDNVLFDGDELSGVIDFYFACTDAFLYDLAITLN 217 (296)
T ss_pred cc--------ccCHHHHHHHHHHHHHHHhhhhh-cCCCcCCccCcCcccEEEeCCceEEEeehhhhcCchHHHHHHHHHH
Confidence 00 01122233444444444432211 357799999999999999887767999995 78999999999652
Q ss_pred --h----cCCC----hhhHHHhhhhCCCCCCHHHHHHHHH
Q 022304 238 --C----AGFG----GSFYNSYFEVMPKQPGFEKRRDLYM 267 (299)
Q Consensus 238 --~----~~~~----~~f~~~Y~~~~~l~~~~~~r~~~~~ 267 (299)
+ .+++ +.|+++|++..|++++....+..+.
T Consensus 218 ~~~~~~~~~~~~~~~~~~l~gY~~~~~ls~~e~~~l~~~~ 257 (296)
T cd05153 218 DWCFDEDGALDPERAQALLAGYQAVRPLTEAERAALPIML 257 (296)
T ss_pred HHHhCccCCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Confidence 1 1123 5799999999999876555555544
No 7
>TIGR00938 thrB_alt homoserine kinase, Neisseria type. Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.
Probab=99.96 E-value=5.6e-28 Score=213.24 Aligned_cols=241 Identities=15% Similarity=0.178 Sum_probs=168.4
Q ss_pred cCCcchHHHHHHhcCCCcceeeeeeeCCccccceEEEEeCCccEEEEecCCC-CcchHHHHHHHHHHHHhcCCCCCccce
Q 022304 5 ALSDDPIREWILSEGKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRSI-GPSMFEGEALGLGAMYETRTIRAPRPF 83 (299)
Q Consensus 5 ~~~~~~i~~~l~~~~~~~~~~~~~~~~~G~~n~~y~v~~~~g~~vlK~~~~~-~~~~~~~E~~~l~~L~~~~~~~vP~~~ 83 (299)
-++.++|.++|.+++.+ .+.+++++.+|..|.+|++++++|+||+|++... ....+..|.+++++|++. ++|||+++
T Consensus 6 ~~~~~~l~~~l~~y~~~-~~~~i~~~~~G~~n~~y~v~t~~~~~vLK~~~~~~~~~~i~~e~~~l~~L~~~-g~pvp~~i 83 (307)
T TIGR00938 6 SVSDEEMSSFLDGYDLG-ELLSLKGIAEGVENSNYLLTTDVGRYILTLYEKRVKAEELPFFLALTTHLAAR-GLPVPKPV 83 (307)
T ss_pred cCCHHHHHHHHHhcCCC-CceeccccCCccccceEEEEeCCCcEEEEEecCCCCHHHHHHHHHHHHHHHHC-CCCCCccc
Confidence 35778999999988665 6889999999999999999999999999998653 345677899999999886 68999999
Q ss_pred eecccC-----CCceEEEEecccCCCCC----CcHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCCCCHHHHH
Q 022304 84 KVGALP-----TGGSYIIMEFIEFGSSR----GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFY 154 (299)
Q Consensus 84 ~~~~~~-----~~~~~~v~e~l~G~~~~----~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 154 (299)
...... .|..+++++|++|.... ...+++|+.||+||..... |+.+... ..+...|...+
T Consensus 84 ~t~~g~~~~~~~g~~~~l~e~i~G~~~~~~~~~~~~~~G~~LA~lH~~~~~---~~~~~~~--------~~~~~~w~~~~ 152 (307)
T TIGR00938 84 KSRDGRQLSTLAGKPACLVEFLQGLSVGRPTAMHCRPVGEVLAWMHLAGAH---FPENRKN--------SLRLEAWHILA 152 (307)
T ss_pred cCCCCCeehhcCCeEEEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHhhhcc---CCCCCCC--------CCChHHHHHHH
Confidence 865432 46789999999998653 3468999999999998752 3322110 01123454433
Q ss_pred HHhhhHHHHHHHHhhcCChHHHHHHHHHHHHHhccccCCCCCcceeccCCCCCCeeecCCCCeEEEccc-cccCCchhhh
Q 022304 155 AEHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA-CYYGHNEAEF 233 (299)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~liHgDl~~~Nvl~~~~~~~~iID~~-~~~g~~~~Dl 233 (299)
... . .... .......+.+.+.++.+...... ..+.++||||+|++|+++++++..+||||+ +++|++.+|+
T Consensus 153 ~~~-~-~~~~-----~l~~~~~~~l~~~~~~l~~~~~~-~~~~~l~HgD~~~~Nvl~~~~~~~~vIDfd~~~~~~~~~DL 224 (307)
T TIGR00938 153 EKC-F-EAAP-----QLEAHMGAELDKELDYLDKFWPR-DLPRGVIHADLFPDNVLFDGDSVKGVIDFYFACTDARAYDL 224 (307)
T ss_pred Hhh-h-hccc-----ccCHHHHHHHHHHHHHHHhhhhh-cCCCccCCCCCCcCcEEEECCceEEEeecccccCcchHHHH
Confidence 211 0 0000 01111122333333333322222 357899999999999999888767999995 7899999999
Q ss_pred hhhh---h----cCCC----hhhHHHhhhhCCCCCCHHHHHHHH
Q 022304 234 GMSW---C----AGFG----GSFYNSYFEVMPKQPGFEKRRDLY 266 (299)
Q Consensus 234 a~~~---~----~~~~----~~f~~~Y~~~~~l~~~~~~r~~~~ 266 (299)
+.+. . ..+. ..|++||.+..|+++...+.+...
T Consensus 225 A~~~~~~~~~~~~~~~~~~~~~~l~gY~~~~~Ls~~e~~~l~~~ 268 (307)
T TIGR00938 225 AITVNAWCFDADDHFDADHAKALIKGYHQSRPLTEEEKAAFPVL 268 (307)
T ss_pred HHHHHHHHcCCCCCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHH
Confidence 9752 2 1233 689999999999997655544444
No 8
>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]
Probab=99.96 E-value=7.3e-27 Score=204.95 Aligned_cols=241 Identities=18% Similarity=0.183 Sum_probs=167.8
Q ss_pred ccCCcchHHHHHHhcCCCcceeeeeeeCCccccceEEEEeCCccEEEEecCCC-CcchHHHHHHHHHHHHhcCCCCCccc
Q 022304 4 AALSDDPIREWILSEGKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRSI-GPSMFEGEALGLGAMYETRTIRAPRP 82 (299)
Q Consensus 4 ~~~~~~~i~~~l~~~~~~~~~~~~~~~~~G~~n~~y~v~~~~g~~vlK~~~~~-~~~~~~~E~~~l~~L~~~~~~~vP~~ 82 (299)
...+.+++...|...++| ...+..++.+ ..|.||+|++++|+||||++++. +...+..|.+++++|+++ +++||.|
T Consensus 9 ~~~~~~~~~~~l~~~~~g-~~~~~~~l~s-~eN~~f~~~~~~g~~iLki~~~~~~~~~i~~el~~l~~La~~-~i~v~~P 85 (331)
T COG2334 9 TPLTSDEAAAALEAYHYG-LDGSLRGLNS-EENSNFRVQTEDGRYILKIYRPGWTRAEIPFELALLQHLAER-GIPVPAP 85 (331)
T ss_pred cCcChHHHHHHHHhcCcC-cccccccccc-ccCceEEEEecCCCeEEEEecCCCCHHHHHHHHHHHHHHHHc-CCCCCCC
Confidence 467788899999888777 4556777775 78999999999999999999974 667889999999999997 6888888
Q ss_pred eeecccC-----CC--ceEEEEecccCCCCC-----CcHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCCCCH
Q 022304 83 FKVGALP-----TG--GSYIIMEFIEFGSSR-----GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNW 150 (299)
Q Consensus 83 ~~~~~~~-----~~--~~~~v~e~l~G~~~~-----~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 150 (299)
+..-+.. .+ +.+.+.+|++|..+. .+.+.+|++||+||..... |.+.+++... ...|
T Consensus 86 l~~~dG~~l~~~~~~~r~a~lf~~l~G~~~~~~~~~~~~~~lG~~LgrlH~a~~~---f~~~~p~~~~----~~~w---- 154 (331)
T COG2334 86 LPSLDGELLEALSGGPRPAALFEYLPGRPLERDDNAEQLEELGRMLGRLHLALRG---FPFERPNALR----RLEW---- 154 (331)
T ss_pred ccCCCcchhhhccCCceeEEEEEecCCcCcCCCCcHHHHHHHHHHHHHHHHHhCc---CCccCCCccc----ccch----
Confidence 6554432 57 899999999998764 3578999999999999964 5443443321 1223
Q ss_pred HHHHHHhhhHHHHHHHHhhcCChHHHH----HHHHHHHHHhccccCCCCCcceeccCCCCCCeeecCCCC-eEEEcc-cc
Q 022304 151 IEFYAEHRLGYQLKLALDQYGDSTIYQ----RGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGE-PVILDP-AC 224 (299)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~l~~~~~~~~liHgDl~~~Nvl~~~~~~-~~iID~-~~ 224 (299)
.-.... ... ......+..+.. .++++.+.++..++. .+..+||||+|++||++++++. +++||| +|
T Consensus 155 ~~~~~~--~~~----~~~~~~~~~l~a~~~~~~~~~~~~~~~~lp~--~~~~iIH~D~~~~NVl~d~~~~~~g~iDFdDa 226 (331)
T COG2334 155 DILEPR--ALL----RLDLVEPEDLRAALLAALDRLLARLPAHLPA--LGDQIIHGDLHPDNVLFDDDTDVSGFIDFDDA 226 (331)
T ss_pred hhhcch--hhh----hhcccCchhhHHHHHHHHHHHHhhchhhCCc--ccceeeecCCCccceeEcCCCCeeeEEEcccc
Confidence 210000 000 000011222223 333444444443332 1234999999999999988764 899998 68
Q ss_pred ccCCchhhhhhhh---hcC--CC----hhhHHHhhhhCCCCCCHHHHHHHH
Q 022304 225 YYGHNEAEFGMSW---CAG--FG----GSFYNSYFEVMPKQPGFEKRRDLY 266 (299)
Q Consensus 225 ~~g~~~~Dla~~~---~~~--~~----~~f~~~Y~~~~~l~~~~~~r~~~~ 266 (299)
++|+.++|++++. ... .. .+|++||++++|+++...+-+..+
T Consensus 227 ~~~~~i~DlAi~l~~~~~d~~~~~~~~~a~l~GY~~v~pl~~~El~~Lp~l 277 (331)
T COG2334 227 GYGWFIYDLAIALNAWNGDEADPRAAIAAFLEGYEEVRPLTAAELELLPDL 277 (331)
T ss_pred ccchHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHhcCCCCHHHHHHHHHH
Confidence 9999999999874 221 11 489999999999987554444433
No 9
>PRK11768 serine/threonine protein kinase; Provisional
Probab=99.94 E-value=1.4e-25 Score=199.08 Aligned_cols=249 Identities=16% Similarity=0.136 Sum_probs=164.8
Q ss_pred cccCCcchHHHHHHhcCCCcceeeeeeeCCccccceEEEEeCCc-cEEEEecCCC--CcchHHHHHHHHHHHHhcCCCCC
Q 022304 3 VAALSDDPIREWILSEGKATHITKICPVGGGCINLASRYGTDAG-SFFVKTNRSI--GPSMFEGEALGLGAMYETRTIRA 79 (299)
Q Consensus 3 ~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~G~~n~~y~v~~~~g-~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~~~v 79 (299)
...++.+.|.+.+...|+. .-..+.+++ |..|.||+|+++++ +||+|++++. ....+..|++++.+|++. ++||
T Consensus 8 ~~~l~p~~~~~a~~~~g~~-~~~~~~~l~-s~eN~vy~v~~~~~~~~vlKv~r~~~~~~~~i~~E~~~l~~L~~~-gipv 84 (325)
T PRK11768 8 FQTLTPDLILDALESLGLR-VDGRLLALN-SYENRVYQFGDEDGRRVVAKFYRPERWSDAQILEEHAFALELAEA-EIPV 84 (325)
T ss_pred CCCCChHHHHHHHHHcCCC-CccceEeec-cccceEEEEecCCCCEEEEEEcCcccCCHHHHHHHHHHHHHHHHC-CCCC
Confidence 3578999999999877542 123456675 67899999999766 8999998753 346688999999999986 6898
Q ss_pred ccceeec-ccC---CCceEEEEecccCCCCC----CcHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCCCCHH
Q 022304 80 PRPFKVG-ALP---TGGSYIIMEFIEFGSSR----GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWI 151 (299)
Q Consensus 80 P~~~~~~-~~~---~~~~~~v~e~l~G~~~~----~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 151 (299)
|.|+..+ .+- +|..+.+++|++|+... ..++++|+.||+||.++.. +++.+. ..| ++.
T Consensus 85 ~~p~~~~G~~~~~~~g~~~~l~~~~~G~~~~~~~~~~~~~lG~~LarlH~~~~~---~~~~~r---------~~~--~~~ 150 (325)
T PRK11768 85 VAPLAFNGQTLHEHQGFRFALFPRRGGRAPELDNLDQLEWVGRFLGRIHQVGAK---RPFEHR---------PTL--DLQ 150 (325)
T ss_pred CCCccCCCCEEEEECCEEEEEEeeeCCCCCCCCCHHHHHHHHHHHHHHHhhccC---CCCCCC---------CcC--CHH
Confidence 8875322 110 46788999999998753 4578999999999998863 122110 112 111
Q ss_pred HHHHHhhhHHHHHHHHhhcCChH----HHHHHHHHHHHHhccccCCCCCcceeccCCCCCCeeecCCCCeEEEcc-cccc
Q 022304 152 EFYAEHRLGYQLKLALDQYGDST----IYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDP-ACYY 226 (299)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~~l~~~~~~~~liHgDl~~~Nvl~~~~~~~~iID~-~~~~ 226 (299)
.+..+ ....+. .....+.. +.+.++++.+.+...+...+.+.++||||+|++|||++ + .++|||| +|++
T Consensus 151 ~~~~~--~~~~l~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~liHgD~h~~NvL~~-d-~~~iIDFDd~~~ 224 (325)
T PRK11768 151 EYGIE--PRDWLL--ASDLIPSDLRPAYLAAADQLLAAVEACWARGDVRLLRLHGDCHPGNILWR-D-GPHFVDLDDARM 224 (325)
T ss_pred HHHHH--HHHHHH--hCCCCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCccceecCCCchhcccc-C-CcEEEeCCCCCC
Confidence 11110 000010 01111111 22334444444444333213577999999999999995 4 4899999 5889
Q ss_pred CCchhhhhhhhhcCC------ChhhHHHhhhhCCCCCCHHHHHHHHHHHHHHHH
Q 022304 227 GHNEAEFGMSWCAGF------GGSFYNSYFEVMPKQPGFEKRRDLYMLYHYLNH 274 (299)
Q Consensus 227 g~~~~Dla~~~~~~~------~~~f~~~Y~~~~~l~~~~~~r~~~~~l~~~l~~ 274 (299)
|++++||+++..+.. -.+|++||++++|+++.....+..+...+.+.+
T Consensus 225 g~~i~DLa~~l~~~~~~~~~~~~~~l~GY~~~r~l~~~e~~~l~~l~~lR~~~~ 278 (325)
T PRK11768 225 GPAVQDLWMLLSGDRAEQLMQLETLLEGYEEFCEFDPRELALIEPLRALRLIHY 278 (325)
T ss_pred CCHHHHHHHHhccCcchhHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHH
Confidence 999999998653221 247999999999999876666666665555543
No 10
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=99.93 E-value=1.2e-24 Score=187.20 Aligned_cols=207 Identities=16% Similarity=0.140 Sum_probs=138.2
Q ss_pred eeeeCCccccceEEEEeCCccEEEEecCCCCc---chHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEecccCC
Q 022304 27 ICPVGGGCINLASRYGTDAGSFFVKTNRSIGP---SMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFG 103 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~~~g~~vlK~~~~~~~---~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~ 103 (299)
++++.+|.+|.+|++++++++||+|+++.... ...+.|.++++.++.. ++ +|+++..+. .+++++|++|.
T Consensus 1 ~~~~~~G~tn~~y~~~~~~~~~vlR~~~~~~~~~~~~r~~E~~~l~~l~~~-g~-~P~~i~~~~-----~~~v~e~i~G~ 73 (256)
T TIGR02721 1 VQTLSGGLTNRSWRIEHPGISFVWRPQSPVCKALGVDRQREYQILQALSAL-GL-APKPILVNE-----HWLLVEWLEGE 73 (256)
T ss_pred CCcCCCcCcCCeEEEEeCCccEEEeeCCcccccccCcHHHHHHHHHHHHhc-CC-CCceEEEeC-----CEEEEEeccCc
Confidence 35778999999999998877999999875322 2357899999999876 44 799998863 37999999998
Q ss_pred CCC-------CcHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCCCCHHHHHHHhhhHHHHHHHHhhcCChHHH
Q 022304 104 SSR-------GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIY 176 (299)
Q Consensus 104 ~~~-------~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (299)
+++ ....++++.|+++|+.+.+ +.+ .+.. .++..+..........+
T Consensus 74 ~~~~~~~~~~~~~~~la~~l~~lH~~~~~----~~~---------------~~~~-----~~~~~~~~~l~~~~~~~--- 126 (256)
T TIGR02721 74 VITLDQFVALDLLLELAALLHQLHSQPRF----GYP---------------LSLK-----ARIAHYWLQIDPARRTP--- 126 (256)
T ss_pred ccccccccCchhHHHHHHHHHHHhCCCCC----CCC---------------CCHH-----HHHHHHHHhcccccCCh---
Confidence 753 2468999999999998752 110 0000 01111111111111111
Q ss_pred HHHHHHHHHHhccccCCCCCcceeccCCCCCCeeecCCCCeEEEccc-cccCCchhhhhhhhhc---CCChhhHHHhhhh
Q 022304 177 QRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA-CYYGHNEAEFGMSWCA---GFGGSFYNSYFEV 252 (299)
Q Consensus 177 ~~~~~~~~~l~~~l~~~~~~~~liHgDl~~~Nvl~~~~~~~~iID~~-~~~g~~~~Dla~~~~~---~~~~~f~~~Y~~~ 252 (299)
.+.++.+.+.......+.++++||||++++|||+++++ .+||||+ +.+|||++|||.+... ...+.|++.|.+.
T Consensus 127 -~~~~~~~~~~~~~~~~~~~~~l~H~Dl~~~Nil~~~~~-~~lIDwE~a~~gdp~~DLa~~~~~~~~~~~~~~l~~Y~~~ 204 (256)
T TIGR02721 127 -EWLRLYKQFRSAPEPAPLPLAPLHMDVHAYNLVVTPQG-LKLIDWEYASDGDIALELAAIIRANDEEQQQDFVQRYCQR 204 (256)
T ss_pred -HHHHHHHHHHhccCCCCCCCeeecCCCCcCcEEEeCCC-CEEEeccccCcCCHHHHHHHHHHhCCHHHHHHHHHHHHHh
Confidence 12233333322222113578999999999999998776 7899995 7899999999986432 1225799999988
Q ss_pred CCCC--CCHHHHHHHHHHH
Q 022304 253 MPKQ--PGFEKRRDLYMLY 269 (299)
Q Consensus 253 ~~l~--~~~~~r~~~~~l~ 269 (299)
.+.. +.+..++..|..+
T Consensus 205 ~~~~~~~~~~~~~~~~~~~ 223 (256)
T TIGR02721 205 RRIYSISVLWRQVKAWQPW 223 (256)
T ss_pred hCCccHHHHHHHHHHHHHH
Confidence 6543 3455555555433
No 11
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=99.92 E-value=1.7e-23 Score=178.71 Aligned_cols=218 Identities=15% Similarity=0.127 Sum_probs=142.6
Q ss_pred eeeeeCCccc-cceEEEEeCCccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEecccCCC
Q 022304 26 KICPVGGGCI-NLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGS 104 (299)
Q Consensus 26 ~~~~~~~G~~-n~~y~v~~~~g~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~~ 104 (299)
.+++|..|.+ |.+|+++.+++++|+|+.+......+.+|+++++.|++. +++|+++..+.. .+..+++|++++|.+
T Consensus 2 ~~~~~~~g~~~~~v~~~~~~~~~~~vk~~~~~~~~~~~~E~~~l~~l~~~--~~vP~v~~~~~~-~~~~~lv~e~i~G~~ 78 (244)
T cd05150 2 RWERVTEGQSGATVYRLDGKNPGLYLKIAPSGPTYELEREAERLRWLAGK--LPVPEVIDYGSD-DGRAWLLTSAVPGVP 78 (244)
T ss_pred cceecCCCCCcCeEEEEcCCCCcEEEEecCCCcccchHHHHHHHHHHHhc--CCCCeEEEEEec-CCccEEEEEeeCCcc
Confidence 3568877865 899999987779999999764345678999999999875 899999988754 467899999999987
Q ss_pred CC---------CcHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCCCCHHHHHHHhhhHHHHHHH-Hh-hcCCh
Q 022304 105 SR---------GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLA-LD-QYGDS 173 (299)
Q Consensus 105 ~~---------~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~ 173 (299)
+. ....++|+.+++||+.+.+. +.+. + .+...... ........ .. ...+.
T Consensus 79 l~~~~~~~~~~~~~~~l~~~l~~lH~i~~~~--~~~~-----~----------~~~~~~~~--~~~~~~~~~~~~~~~~~ 139 (244)
T cd05150 79 AAALWEELEPERLVDALAEALRRLHALPVAD--CPFD-----R----------RLDRRLAE--ARARVENGLVDEDDFDD 139 (244)
T ss_pred HhHhhcccCHHHHHHHHHHHHHHHhcCCccc--CCcc-----h----------hHHHHHHH--HHHHHhcCCcChhhCcH
Confidence 53 23678999999999987521 1110 0 00000000 00000000 00 00000
Q ss_pred HH-HHHHHHHHHHHhccccCCCCCcceeccCCCCCCeeecCCCCeEEEccc-cccCCchhhhhhhhh---cC-----CCh
Q 022304 174 TI-YQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA-CYYGHNEAEFGMSWC---AG-----FGG 243 (299)
Q Consensus 174 ~~-~~~~~~~~~~l~~~l~~~~~~~~liHgDl~~~Nvl~~~~~~~~iID~~-~~~g~~~~Dla~~~~---~~-----~~~ 243 (299)
.. .....++.+.+...... ..++++||||+|++|||+++++.++||||+ +.+|||++|++.+.. .. ..+
T Consensus 140 ~~~~~~~~~~~~~l~~~~~~-~~~~~l~HgD~~~~Nil~~~~~~~~iIDwe~a~~gdp~~Dla~~~~~~~~~~~~~~~~~ 218 (244)
T cd05150 140 ERRGWSAEELYAELEATRPA-EEDLVVTHGDACLPNIIVDPGKFSGFIDLGRLGVADRYQDLALAVRSLRENLGGEEYAA 218 (244)
T ss_pred hhcCCCHHHHHHHHHhhCCC-cCceEEECCCCCCccEEEeCCcEEEEEEccccccccHHHHHHHHHHHhhhhcCChHHHH
Confidence 00 01122333333332222 357899999999999999887767999996 679999999997631 11 225
Q ss_pred hhHHHhhhhCCCCCCHHHHHHHHHHHH
Q 022304 244 SFYNSYFEVMPKQPGFEKRRDLYMLYH 270 (299)
Q Consensus 244 ~f~~~Y~~~~~l~~~~~~r~~~~~l~~ 270 (299)
+|+++|.... .+ .+|+.+|+++.
T Consensus 219 ~f~~~Y~~~~-~~---~~~~~~~~~~~ 241 (244)
T cd05150 219 RFLDRYGIDA-PD---PEKLAYYRLLD 241 (244)
T ss_pred HHHHHcCCCC-CC---HHHHHHHHHHh
Confidence 7899997631 22 58899987764
No 12
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=99.91 E-value=3.3e-23 Score=176.01 Aligned_cols=216 Identities=16% Similarity=0.097 Sum_probs=135.5
Q ss_pred eeeeC-CccccceEEEEeCCccEEEEecCCC-CcchHHHHHHHHHHHHhcCCCCCccceeecccCC--CceEEEEecccC
Q 022304 27 ICPVG-GGCINLASRYGTDAGSFFVKTNRSI-GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPT--GGSYIIMEFIEF 102 (299)
Q Consensus 27 ~~~~~-~G~~n~~y~v~~~~g~~vlK~~~~~-~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~--~~~~~v~e~l~G 102 (299)
++++. +|..|.+|++. ++||+|+++.. ....++.|.+++++|++..++++|+++..+...+ +..|++|++++|
T Consensus 2 ~~~~~~gG~~n~vy~~~---~~~VlR~~~~~~~~~~~~~E~~~l~~L~~~~~v~vP~~~~~~~~~~~~~~~~~l~~~i~G 78 (235)
T cd05155 2 IEPVDSGGTDNATFRLG---DDMSVRLPSAAGYAGQVRKEQRWLPRLAPHLPLPVPEPLGKGEPGEGYPWPWSVYRWLEG 78 (235)
T ss_pred ceeccCCCcccceEEcC---CceEEEcCCccchHHHHHHHHHHHHHHhccCCCCCCceeecCCCccCCCcceEEEEeecC
Confidence 46775 66778999983 47999998763 3456889999999998766799999998765422 356999999999
Q ss_pred CCCC--------CcHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCCCCHHHHHHHhhhHHHHHHHHhhcCChH
Q 022304 103 GSSR--------GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDST 174 (299)
Q Consensus 103 ~~~~--------~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (299)
.++. ....++|+.|++||+.+.+. ..... ..... .......|...... ....... ..+.
T Consensus 79 ~~l~~~~~~~~~~l~~~la~~l~~LH~i~~~~--~~~~~--~~~~~--~~~~~~~~~~~~~~-----~~~~~~~-~l~~- 145 (235)
T cd05155 79 ETATAAALSDPSEFAEDLADFLAALRQIDPSG--GPPAG--RHNFL--RGGDLAVRDAETRE-----AIEALEG-VIDV- 145 (235)
T ss_pred CCCCccccCCHHHHHHHHHHHHHHHhCCCccc--CCccC--Ccccc--CCCChhHhhHHHHH-----HHHHccc-ccCh-
Confidence 8763 13578999999999988632 11100 00000 00001122211100 0000000 0111
Q ss_pred HHHHHHHHHHHHhccccCCCCCcceeccCCCCCCeeecCCCCeEEEccc-cccCCchhhhhhhhh--c-CCChhhHHHhh
Q 022304 175 IYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA-CYYGHNEAEFGMSWC--A-GFGGSFYNSYF 250 (299)
Q Consensus 175 ~~~~~~~~~~~l~~~l~~~~~~~~liHgDl~~~Nvl~~~~~~~~iID~~-~~~g~~~~Dla~~~~--~-~~~~~f~~~Y~ 250 (299)
+.+.++.+...+... ..+++|||||||++|||+++++.++||||+ +.+|||++|++.++. . ...+.|++.|+
T Consensus 146 --~~~~~~~~~~~~~~~--~~~~~l~HGD~~~~Nvlv~~~~i~giIDw~~a~~gDp~~Dla~~~~~~~~~~~~~~~~~y~ 221 (235)
T cd05155 146 --DAARALWEAALRAPW--WGPPVWFHGDLAPGNLLVQDGRLSAVIDFGCLGVGDPACDLAIAWTLLDEDSRAAFRAALG 221 (235)
T ss_pred --HHHHHHHHHHhcccc--cCCceEEeCCCCCCcEEEECCCEEEEEeCcccCcCChHHHHHHHHhcCCHHHHHHHHHHcC
Confidence 222233332222222 257899999999999999877667899995 789999999997642 1 22357899998
Q ss_pred hhCCCCCCHHHHHHHH
Q 022304 251 EVMPKQPGFEKRRDLY 266 (299)
Q Consensus 251 ~~~~l~~~~~~r~~~~ 266 (299)
+.+. -..|.++|
T Consensus 222 -~~~~---~~~~~~~~ 233 (235)
T cd05155 222 -VDDA---TWARGRGW 233 (235)
T ss_pred -CCHH---HHHHhccc
Confidence 4332 34666655
No 13
>PLN02876 acyl-CoA dehydrogenase
Probab=99.91 E-value=1.5e-22 Score=199.64 Aligned_cols=251 Identities=17% Similarity=0.212 Sum_probs=158.6
Q ss_pred CCcchHHHHHHhcCCC--cc--eeeeeeeCCccccceEEEEeCCc----cEEEEecCCC----CcchHHHHHHHHHHHHh
Q 022304 6 LSDDPIREWILSEGKA--TH--ITKICPVGGGCINLASRYGTDAG----SFFVKTNRSI----GPSMFEGEALGLGAMYE 73 (299)
Q Consensus 6 ~~~~~i~~~l~~~~~~--~~--~~~~~~~~~G~~n~~y~v~~~~g----~~vlK~~~~~----~~~~~~~E~~~l~~L~~ 73 (299)
++.+.+..||.+...+ .. ..+++++++|.+|.+|+++..++ +||+|..+.. ....+.+|+++++.|..
T Consensus 18 ~d~~~l~~~l~~~~~~~~~~~~~~~v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~ 97 (822)
T PLN02876 18 FDEDALLRYAAANVAGFPVPPSTFKVSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGE 97 (822)
T ss_pred CCHHHHHHHHHHhCCCcCCCccceeEEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHhh
Confidence 6678899999977322 22 35799999999999999987653 7999998652 23468899999999986
Q ss_pred cCCCCCccceeecccC--CCceEEEEecccCCCCC-------------CcHHHHHHHHHHHHhcCCCCCCCCCCCCCccc
Q 022304 74 TRTIRAPRPFKVGALP--TGGSYIIMEFIEFGSSR-------------GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIG 138 (299)
Q Consensus 74 ~~~~~vP~~~~~~~~~--~~~~~~v~e~l~G~~~~-------------~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~g 138 (299)
+.++|||+++..+... .|.+|+||||++|.... ....++++.|++||++... ..|+... |
T Consensus 98 ~~~vpVP~v~~~~~d~~v~G~~flVME~v~G~~~~~~~~~~~~~~~r~~l~~~l~~~La~LH~vd~~--~~gl~~~---g 172 (822)
T PLN02876 98 HTDVPVPKVYCLCTDASVIGTAFYIMEYLEGRIFVDPKLPGVAPERRRAIYRATAKVLAALHSADVD--AIGLGKY---G 172 (822)
T ss_pred cCCCCCCcEEEEecCCCcCCCceEEEEecCCcccCCccCCCCCHHHHHHHHHHHHHHHHHHhCCCch--hcChhhc---C
Confidence 5579999999875432 47899999999997531 1246799999999998753 2332210 1
Q ss_pred ccccCCCCCCCHHHHHHHhhhHHHHHHHHhhcC--ChHHHHHHHHHHHHHhccccCCC---CCcceeccCCCCCCeeecC
Q 022304 139 STPQINKWTSNWIEFYAEHRLGYQLKLALDQYG--DSTIYQRGHRLMKNLAPLFEGVN---VEPCLLHGDLWSGNISSDK 213 (299)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~~~---~~~~liHgDl~~~Nvl~~~ 213 (299)
.. .+|.. .++..+.+....... .......+.++.+.+....+... .+++||||||+++|||+++
T Consensus 173 ---~~----~~~~~----~~l~~w~~~~~~~~~~~~~~~~~~~~~l~~wL~~~~P~~~~~~~~~~LvHGD~~~~Nvl~~~ 241 (822)
T PLN02876 173 ---RR----DNYCK----RQVERWAKQYLASTGEGKPPRNPKMLELIDWLRENIPAEDSTGAGTGIVHGDFRIDNLVFHP 241 (822)
T ss_pred ---CC----CchHH----HHHHHHHHHHHHhhcccCCCCChhHHHHHHHHHhcCCCccccCCCcceEecCcccccEEEcC
Confidence 00 11110 011111111111000 00001223333344433332211 1578999999999999975
Q ss_pred C--CCeEEEccc-cccCCchhhhhhhhh----c-------------------CCC--hhhHHHhhhhCCCCCCHHHHHHH
Q 022304 214 N--GEPVILDPA-CYYGHNEAEFGMSWC----A-------------------GFG--GSFYNSYFEVMPKQPGFEKRRDL 265 (299)
Q Consensus 214 ~--~~~~iID~~-~~~g~~~~Dla~~~~----~-------------------~~~--~~f~~~Y~~~~~l~~~~~~r~~~ 265 (299)
+ +..+||||+ +++|||..||+.++. . |++ +++++.|++..+.+.. ...+.+
T Consensus 242 ~~~~v~aVLDWE~a~~GdPl~DLa~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~e~~~~Y~~~~g~~~~-~~~~~~ 320 (822)
T PLN02876 242 TEDRVIGILDWELSTLGNQMCDVAYSCLPYIVDINLDNQQVGKGFEFTGIPEGIPSLPEYLAEYCSASGKPWP-AANWKF 320 (822)
T ss_pred CCCeEEEEEeeeccccCChHHHHHHHhhhccccccCCccccccccccCcCCCCCCCHHHHHHHHHHHhCCCCC-CcccHH
Confidence 3 336899996 789999999996521 0 222 4799999998664311 134566
Q ss_pred HHHHHHHH
Q 022304 266 YMLYHYLN 273 (299)
Q Consensus 266 ~~l~~~l~ 273 (299)
|..+..+.
T Consensus 321 ~~~~~~~r 328 (822)
T PLN02876 321 YVAFSLFR 328 (822)
T ss_pred HHHHHHHH
Confidence 66555543
No 14
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=99.90 E-value=4.3e-23 Score=173.61 Aligned_cols=191 Identities=15% Similarity=0.195 Sum_probs=128.8
Q ss_pred eeeeeeCCccccceEEEEeCCccEEEEecCCC-CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEecccCC
Q 022304 25 TKICPVGGGCINLASRYGTDAGSFFVKTNRSI-GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFG 103 (299)
Q Consensus 25 ~~~~~~~~G~~n~~y~v~~~~g~~vlK~~~~~-~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~ 103 (299)
.+++++++|.+|.+|+. .++++|+|++++. ....+++|+++++.|+.. ++|||+|+..+.. .+..+++|+|++|.
T Consensus 4 ~~~~~i~~G~t~~~y~~--~~~~~VlR~~~~~~~~~~i~~E~~~l~~l~~~-glpvP~~~~~~~~-~~~~glv~e~i~G~ 79 (226)
T TIGR02172 4 SDWTQTGEGGNGESYTH--KTGKWMLKLYNPGFDKETIKREFDASRKVFSL-GIPTPHPFDLVED-GGRLGLIYELIVGK 79 (226)
T ss_pred hHheeecCCCCcceeEe--cCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHc-CCCCCceEEEEec-CCeeeeeeeecCCc
Confidence 46789999999999984 3558999999863 345578999999999975 7999999998754 45567899999997
Q ss_pred CC-----C-------CcHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCCCCHHHHHHHhhhHHHHHHHHhhcC
Q 022304 104 SS-----R-------GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYG 171 (299)
Q Consensus 104 ~~-----~-------~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (299)
+. . .....+|+.+++||+.+.+. .+++ . .. .++...+.... ..
T Consensus 80 ~~~~~~~~~~~~~~~~l~~~la~~l~~lH~~~~~~--~~l~----------------~---~~--~~~~~~l~~~~--~~ 134 (226)
T TIGR02172 80 RSFSRIISDNPSRLEEIAKIFAEMAKKLHSTKCDT--STFQ----------------S---YK--EKIRKFIEEKD--FV 134 (226)
T ss_pred cchhhhhcCCHHHHHHHHHHHHHHHHHHhCCCCCC--CcHH----------------H---HH--HHHHHHHHhcc--CC
Confidence 51 1 13467888888999976531 1110 0 00 01111111110 01
Q ss_pred ChHHHHHHHHHHHHHhccccCCCCCcceeccCCCCCCeeecCCCCeEEEccc-cccCCchhhhhhhhh-cCCC----hhh
Q 022304 172 DSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA-CYYGHNEAEFGMSWC-AGFG----GSF 245 (299)
Q Consensus 172 ~~~~~~~~~~~~~~l~~~l~~~~~~~~liHgDl~~~Nvl~~~~~~~~iID~~-~~~g~~~~Dla~~~~-~~~~----~~f 245 (299)
+....+.+.++++ . + +.++++||||+|++||++++++ ++||||+ +.+|||.+||+.++. ..++ ..|
T Consensus 135 ~~~~~~~l~~~l~---~-~---~~~~~~~HgD~~~~Nii~~~~~-~~iIDwe~a~~Gdp~~Dla~~~~~~~~~~~~~~~~ 206 (226)
T TIGR02172 135 PKDYKEKARAFIK---E-V---PDTSTCLHGDFQIGNLITSGKG-TYWIDLGDFGYGNPLFDLGLLFMFCHYLDDDKLQA 206 (226)
T ss_pred CHHHHHHHHHHHH---h-C---CCCCceEecCCCCCcEEEcCCC-cEEEechhcCcCCHHHHHHHHHHhccCChhHHHHH
Confidence 1112222222222 1 2 3466889999999999998877 9999996 789999999998642 3333 467
Q ss_pred HHHhhhh
Q 022304 246 YNSYFEV 252 (299)
Q Consensus 246 ~~~Y~~~ 252 (299)
+..|+..
T Consensus 207 ~~~y~~~ 213 (226)
T TIGR02172 207 IFHMNAE 213 (226)
T ss_pred HHhcCHH
Confidence 8888753
No 15
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=99.90 E-value=2.5e-23 Score=176.02 Aligned_cols=191 Identities=26% Similarity=0.354 Sum_probs=122.2
Q ss_pred eeeeeCCccccceEEEEeCCccEEEEecCCC-CcchHHHHHHHHHHHHhcCCCCCccceeecccC--CCceEEEEecccC
Q 022304 26 KICPVGGGCINLASRYGTDAGSFFVKTNRSI-GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP--TGGSYIIMEFIEF 102 (299)
Q Consensus 26 ~~~~~~~G~~n~~y~v~~~~g~~vlK~~~~~-~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~--~~~~~~v~e~l~G 102 (299)
.++++++|.+|.+|++++++++||+|+++.. ....+..|.+++++|+++ ++|||+++..+... .+..+++|++++|
T Consensus 1 ~i~~l~~G~~n~~~~v~~~~~~~vlK~~~~~~~~~~~~~e~~~~~~l~~~-~~pvP~~~~~~~~~~~~~~~~~~~~~i~g 79 (239)
T PF01636_consen 1 HIRPLSGGFSNRVYRVTTDDGRYVLKFYRPPDAAERLRREAAVLRQLAEH-GIPVPRVLAFDTSDEFNGFPYLLMEYIPG 79 (239)
T ss_dssp -EEEEEESSSSEEEEEEETTSEEEEEEESSHHHHHHHHHHHHHHHHHHHT-TSBS--EEEEEEETEETSEEEEEEEEESS
T ss_pred CCccCCCCCeeeEEEEEECCcEEEEEEeCCCCCHHHHHHHHHHHHHHHhc-CCCCceEEeecccccccccceEEEEEecc
Confidence 4789999999999999999999999999764 346688999999999987 56999999854332 4568999999999
Q ss_pred CCCC---------CcHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCCCCHHHHHHH--hhhHHHHHHHHhhcC
Q 022304 103 GSSR---------GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAE--HRLGYQLKLALDQYG 171 (299)
Q Consensus 103 ~~~~---------~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 171 (299)
.++. ....++|+.|++||+.+.+. .+. ..+..+... ............. .
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~--~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~-~ 140 (239)
T PF01636_consen 80 RPLDDELSPEQRPELLRQLGRALAQLHQVPPPF--SPF----------------ADWPEWRLEFLRQLESWTARLRAS-E 140 (239)
T ss_dssp EEHHHTSTHHHHHHHHHHHHHHHHHHHHSHTTC--CCH----------------THHHHHHHHHHHHHHHHHHHHHHH-C
T ss_pred ccccccccccccccccccchhhhhhcccccccc--ccc----------------ccccccccccccccccccccccch-h
Confidence 8642 23578999999999996321 110 011111110 0011110001111 1
Q ss_pred ChHHHHHHHH-HHHHHhccccCCCCCcceeccCCCCCCeeec-CCCCeEEEccc-cccCCchhhhhhhh
Q 022304 172 DSTIYQRGHR-LMKNLAPLFEGVNVEPCLLHGDLWSGNISSD-KNGEPVILDPA-CYYGHNEAEFGMSW 237 (299)
Q Consensus 172 ~~~~~~~~~~-~~~~l~~~l~~~~~~~~liHgDl~~~Nvl~~-~~~~~~iID~~-~~~g~~~~Dla~~~ 237 (299)
.......+.+ +.+.+...+.. ..+.++||||+|++|||++ +++.++||||+ +.+|+|++|++.+.
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~~~~~~~Dla~~~ 208 (239)
T PF01636_consen 141 LFDDLEELEERLLQELEALLPK-PLPPVLIHGDLHPGNILVDPSDGRIGIIDFEDAGWGDPAYDLARLL 208 (239)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHC-CSCEEEE-SS-SGGGEEEESSTTEEEE--GTT-EEEETHHHHHHHH
T ss_pred hhhhhHHHHHHHHHHHHhhhcc-CCCcEEEEeccccccceeeeccceeEEEecccceECCHHHHHHHHH
Confidence 1111223333 55555544432 3688999999999999998 34434899995 68999999999764
No 16
>TIGR02906 spore_CotS spore coat protein, CotS family. Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.
Probab=99.90 E-value=3.3e-22 Score=176.96 Aligned_cols=224 Identities=17% Similarity=0.144 Sum_probs=141.4
Q ss_pred cceEEEEeCCccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCCccceeecccC-----CCceEEEEecccCCCCC----
Q 022304 36 NLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALP-----TGGSYIIMEFIEFGSSR---- 106 (299)
Q Consensus 36 n~~y~v~~~~g~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~-----~~~~~~v~e~l~G~~~~---- 106 (299)
+.+|+|+|++|+||||..+.. ...+..|.+++++|+++ +++||+|+.+.+.. ++..+.+++|++|.+..
T Consensus 10 ~~v~~v~t~~g~~~LK~~~~~-~~~~~~~~~~~~~L~~~-g~~vp~~i~t~~g~~~~~~~~~~~~l~~~i~G~~~~~~~~ 87 (313)
T TIGR02906 10 RNVYKVETDSGNKCLKKINYP-PERLLFILGAQEHLRKN-GFNIPKILKTKDGELYVKYNGDLYVLTEWIEGRECDFNNP 87 (313)
T ss_pred ccEEEEEeCCCCeEEEEcCCC-HHHHHHHHHHHHHHHHc-CCCCCceeecCCCCEEEEECCEEEEEehhccCcCCCCCCH
Confidence 459999999999999997532 34467789999999987 57999999875432 46789999999998753
Q ss_pred CcHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCCCCHHHHHHHh--hhHHHHHHHHhhc-CC---hHHHHHHH
Q 022304 107 GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEH--RLGYQLKLALDQY-GD---STIYQRGH 180 (299)
Q Consensus 107 ~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~-~~---~~~~~~~~ 180 (299)
..+.++|+.||+||..... |..+.. ..+. .. ...|.+.+... .+........... .+ ....+.+.
T Consensus 88 ~~~~~~g~~La~lH~~~~~---~~~~~~----~~~~-~~-~~~w~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (313)
T TIGR02906 88 IDLKKAAKGLALFHHASKG---YVPPDG----SKIR-SK-LGKWPKQFEKRLKELERFKKIALEKKYKDEFDKLYLKEVD 158 (313)
T ss_pred HHHHHHHHHHHHHHHhCCC---CCCCCc----chhh-cc-ccchHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHH
Confidence 3578999999999999963 211110 0010 01 12344433211 1221111111100 01 00111111
Q ss_pred H-------HHHHHh-----ccccCCCCCcceeccCCCCCCeeecCCCCeEEEccc-cccCCchhhhhhhh---h---cCC
Q 022304 181 R-------LMKNLA-----PLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA-CYYGHNEAEFGMSW---C---AGF 241 (299)
Q Consensus 181 ~-------~~~~l~-----~~l~~~~~~~~liHgDl~~~Nvl~~~~~~~~iID~~-~~~g~~~~Dla~~~---~---~~~ 241 (299)
. .++.+. .+......+.++||||+|++||++++ +.++||||+ +++|++++||+.+. + ..+
T Consensus 159 ~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~liHgD~~~~Nil~~~-~~i~lIDfd~~~~~~~~~Dla~~l~~~~~~~~~~ 237 (313)
T TIGR02906 159 YFLERGKKALELLNKSKYYDLCKEAKKIRGFCHQDYAYHNILLKD-NEVYVIDFDYCTIDLPVRDLRKLIIKLMKKNGVW 237 (313)
T ss_pred HHHHHHHHHHHHHhhCcHHHHHHhhcCcCceEcCCCCcccEEEeC-CcEEEEECcccccCCcHHHHHHHHHHHHHhccCC
Confidence 1 111111 11111124689999999999999987 458999996 78999999999652 2 234
Q ss_pred C----hhhHHHhhhhCCCCCCHHHHHHHHHHHHH
Q 022304 242 G----GSFYNSYFEVMPKQPGFEKRRDLYMLYHY 271 (299)
Q Consensus 242 ~----~~f~~~Y~~~~~l~~~~~~r~~~~~l~~~ 271 (299)
+ ..|+++|.+..|+++.....+..+.+++.
T Consensus 238 d~~~~~~~l~gY~~~~~L~~~e~~~l~~~l~~p~ 271 (313)
T TIGR02906 238 DLEKAKEIIEAYSSINPLSKEEKEVLYIDLAFPH 271 (313)
T ss_pred CHHHHHHHHHHhhccCCCCHHHHHHHHHHHhChH
Confidence 4 47999999999999765555555544443
No 17
>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported
Probab=99.90 E-value=8.6e-22 Score=170.55 Aligned_cols=212 Identities=14% Similarity=0.073 Sum_probs=134.9
Q ss_pred CCCcceeeeeeeCCccccceEEEEeCCc-cEEEEecCCC-CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEE
Q 022304 19 GKATHITKICPVGGGCINLASRYGTDAG-SFFVKTNRSI-GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII 96 (299)
Q Consensus 19 ~~~~~~~~~~~~~~G~~n~~y~v~~~~g-~~vlK~~~~~-~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v 96 (299)
|+.....++...+.|+.|.+|++...+| ++|+|+++.. ....+++|.++++.|+.+.++|+|+++..+ ..+++
T Consensus 8 ~~~~~~~~~~~~~~g~~~~v~~i~~~~g~~~VlR~p~~~~~~~~l~rE~~vL~~L~~~l~vpvP~~~~~~-----~~~~~ 82 (276)
T cd05152 8 GLTLKPETLSLNESGLDFQVVFAKDTDGVPWVLRIPRRPDVSERAAAEKRVLALVRKHLPVQVPDWRVHT-----PELIA 82 (276)
T ss_pred CCccCCCcceecCCcceeEEEEEEcCCCCeEEEEecCCHHHHHHHHHHHHHHHHHHhcCCCCCCceeeec-----CceEE
Confidence 5555666788888888899999976544 8999999752 234578999999999986678889876543 23677
Q ss_pred EecccCCCCC--------------------CcHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCCCCHHHHHHH
Q 022304 97 MEFIEFGSSR--------------------GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAE 156 (299)
Q Consensus 97 ~e~l~G~~~~--------------------~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 156 (299)
|++++|.+.. ..+.++|++|++||+.+... ++.. | .+. .........
T Consensus 83 y~~i~G~p~~~~~~~~~~~~~~~~~~~~~~~la~~la~~La~LH~i~~~~--~~~~-----g-~~~--~~~~~~~~~--- 149 (276)
T cd05152 83 YPKLPGVPAATIDPEIGEYVWNFDHKNPPEVFIESLAKALAELHSIPQDE--AEAA-----G-IPV--ETPEEVRQT--- 149 (276)
T ss_pred EeccCCCcccccCcccccceecccCCCcCHHHHHHHHHHHHHHhCCChhh--cccc-----C-CCC--CCHHHHHHH---
Confidence 8888887531 12578999999999988631 1110 0 000 000111111
Q ss_pred hhhHHHHHHHHhhc-CChHHHHHHHHHHHHHhccccCCCCCcceeccCCCCCCeeecCCC-CeEEEccc-cccCCchhhh
Q 022304 157 HRLGYQLKLALDQY-GDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNG-EPVILDPA-CYYGHNEAEF 233 (299)
Q Consensus 157 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~liHgDl~~~Nvl~~~~~-~~~iID~~-~~~g~~~~Dl 233 (299)
+...++...... .+.. .++++.+.+..... .+.++++||||+|++|||+++++ ..+||||+ +++|||++||
T Consensus 150 --~~~~l~~~~~~~~~~~~---l~~~~~~~L~~~~~-~~~~~~lvHGD~~~~Nilv~~~~~~~gviDWe~a~iGDPa~Dl 223 (276)
T cd05152 150 --MADRMDRVKEEFGVSEA---LWNRWQAWLDDDSY-WPRHTVLVHGDLHPGHILIDEDARVTGLIDWTEAKVGDPARDF 223 (276)
T ss_pred --HHHHHHHHHHhcCCCHH---HHHHHHHHHhhcCC-CCCCCeeEeCCCCCCcEEEeCCCCEEEEECcHhcccCCHHHHH
Confidence 111112211111 1112 22222222321111 13578999999999999998744 46899995 7899999999
Q ss_pred hhhh-hc--CCChhhHHHhhhhCC
Q 022304 234 GMSW-CA--GFGGSFYNSYFEVMP 254 (299)
Q Consensus 234 a~~~-~~--~~~~~f~~~Y~~~~~ 254 (299)
+.++ +. ...++|+++|.+..+
T Consensus 224 a~~~~~~~~~~~~~~~~~Y~~~~g 247 (276)
T cd05152 224 VLHYRIFGEAGLERLIDAYEAAGG 247 (276)
T ss_pred HHHHHhcChHHHHHHHHHHHHcCC
Confidence 9763 22 234789999998664
No 18
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=99.89 E-value=1.7e-21 Score=174.98 Aligned_cols=221 Identities=19% Similarity=0.253 Sum_probs=140.9
Q ss_pred cccCCcchHHHHHHhc-CC--CcceeeeeeeCCccccceEEEEeCCc--cEEEEecCCC----------CcchHHHHHHH
Q 022304 3 VAALSDDPIREWILSE-GK--ATHITKICPVGGGCINLASRYGTDAG--SFFVKTNRSI----------GPSMFEGEALG 67 (299)
Q Consensus 3 ~~~~~~~~i~~~l~~~-~~--~~~~~~~~~~~~G~~n~~y~v~~~~g--~~vlK~~~~~----------~~~~~~~E~~~ 67 (299)
-..|+.+.+.++|.+. ++ .....+++++++|..|.||+|+..+| ++|||...+. ...+...|++.
T Consensus 4 y~~l~~~~v~~yl~~~~~~~~~~~~~~~~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~ 83 (401)
T PRK09550 4 YETLTEEDAVEYAALKLGLFDPKALLTAREIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEA 83 (401)
T ss_pred CeeCCHhHHHHHHHHhcCCCCCcccceeeEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHH
Confidence 3468999999999544 33 23456789999999999999999877 8999997631 22456789999
Q ss_pred HHHHHhcCCCCCccceeecccCCCceEEEEecccCCCC-----------CCcHHHHHHHHHHHHhcCCCCCCCCCCCCCc
Q 022304 68 LGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSS-----------RGNQSVFGKKLAEMHKAGKSSKGFGFDVDNT 136 (299)
Q Consensus 68 l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~~~-----------~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~ 136 (299)
|+.+++..+..||+|+.++. ...+++|||+++... +..++++|+.||++|-..+. +.......
T Consensus 84 L~~l~~~~p~~VPkV~~~D~---~~~~lVME~L~~~~~lr~~Ll~g~~~p~~a~~iG~~LA~~~f~tsd---~~~~~~~~ 157 (401)
T PRK09550 84 LKIQAKYVPDLVPKVYHYDE---ELAVTVMEDLSDHKILRKGLIDGKKYPKLAEHIGEFLARTLFYTSD---FGLSSEEK 157 (401)
T ss_pred HHHHHhhCCCCCCeEEEECC---CCCEEEEecCCCccHHHHHHhcCCccHHHHHHHHHHHHHHHhccch---hhcChhhh
Confidence 99998876788999999984 578999999998541 23478999999999965531 11110000
Q ss_pred cccccc-CCC----------CCCCHHHHHHHhhhHHHHHHHHhh-cCChHHHHHHHHHHHHHhccccCCCCCcceeccCC
Q 022304 137 IGSTPQ-INK----------WTSNWIEFYAEHRLGYQLKLALDQ-YGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDL 204 (299)
Q Consensus 137 ~g~~~~-~~~----------~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~~~~~~~liHgDl 204 (299)
...... .|. .......... +++.+.+....+. ..+..+... +++++..+. ..+.+|+||||
T Consensus 158 ~~~~~~f~N~~l~~ite~lvft~P~~~~~~-n~~~p~l~~~~~~l~~d~~L~~~----~~~L~~~~~--~~~~~l~HgDl 230 (401)
T PRK09550 158 KALVAKFTNPELCKITEDLVFTDPYFDHET-NNFEPELEPEVEELRADKELKLE----VAKLKHKFL--TKAEALLHGDL 230 (401)
T ss_pred hhHHhhcCCHHHhhhhHhhccccchhhhhh-ccCChhhHHHHHHHHhCHHHHHH----HHHHHHHHh--cCCCceeeccC
Confidence 000000 000 0000000000 1122222221111 112222222 333443333 24678999999
Q ss_pred CCCCeeecCCCCeEEEccc-cccCCchhhhhhhh
Q 022304 205 WSGNISSDKNGEPVILDPA-CYYGHNEAEFGMSW 237 (299)
Q Consensus 205 ~~~Nvl~~~~~~~~iID~~-~~~g~~~~Dla~~~ 237 (299)
|++|||+.+++ +.||||+ |.+|+|.+|++.+.
T Consensus 231 ~~gni~~~~~~-~~viD~E~a~~G~~~~Dlg~~l 263 (401)
T PRK09550 231 HTGSIFVTEEE-TKVIDPEFAFYGPIGFDIGTFI 263 (401)
T ss_pred CcccEEeeCCC-cEEEeccccccCChHHHHHHHH
Confidence 99999997664 8999996 78999999999763
No 19
>PRK06149 hypothetical protein; Provisional
Probab=99.88 E-value=4.8e-21 Score=191.41 Aligned_cols=240 Identities=15% Similarity=0.143 Sum_probs=159.7
Q ss_pred cCCcchHHHHHHhcCCCcceeeeeeeCCccccceEEEEeCCccEEEEecCCC-CcchHHHHHHHHHHHHhc-CCCCCccc
Q 022304 5 ALSDDPIREWILSEGKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRSI-GPSMFEGEALGLGAMYET-RTIRAPRP 82 (299)
Q Consensus 5 ~~~~~~i~~~l~~~~~~~~~~~~~~~~~G~~n~~y~v~~~~g~~vlK~~~~~-~~~~~~~E~~~l~~L~~~-~~~~vP~~ 82 (299)
.++.+++..+|.++ +|.. .++.+++ |..|.+|+|++++++||||++++. ....+..|..++++|+++ .+++||+|
T Consensus 16 ~ls~~~~~~ll~~~-ygl~-~~~~~L~-s~~d~nf~v~t~~~~yVLKi~~~~~~~~~l~~e~~~l~hL~~~~~glpvp~p 92 (972)
T PRK06149 16 DVSEAQAERILAEH-YGLS-GTLTELG-SQQDRNFRVDSDGGRFVLKICHAAYAAVELEAQHAALRHLAEREPALRVPVV 92 (972)
T ss_pred CCCHHHHHHHHHHh-cCCc-eEEEecC-CcCcceEEEEecCCcEEEEeCCccCChHHHHHHHHHHHHHHhhCCCCCCcee
Confidence 58899999999766 3322 2456775 566899999998899999999853 345678899999999876 36999999
Q ss_pred eeecccC-------C--CceEEEEecccCCCCC-------CcHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCC
Q 022304 83 FKVGALP-------T--GGSYIIMEFIEFGSSR-------GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKW 146 (299)
Q Consensus 83 ~~~~~~~-------~--~~~~~v~e~l~G~~~~-------~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~g~~~~~~~~ 146 (299)
+...+.. + +..+.+++|++|.... ..++++|+.+|+||..... |. ++... ....|
T Consensus 93 i~t~~G~~~~~~~~~g~~~~vrL~~~l~G~~~~~~~~~~~~~~~~lG~~lArlh~al~~---f~--hp~~~----r~~~W 163 (972)
T PRK06149 93 IPALDGEELLTLDVRGQGLRVRLLDYLPGQPLTRLGHLAPASVAGLGALCARVARALAD---FD--HPGLD----RTLQW 163 (972)
T ss_pred eECCCCCeEEEEecCCceEEEEEEEecCCccccccCCCCHHHHHHHHHHHHHHHHHHcC---CC--CCCCC----Ccccc
Confidence 9765432 1 3457899999997652 2478999999999999963 32 22110 11223
Q ss_pred CCCHHHHHHHhhhHHHHHHHHhhcCChHHHHHHHHHH----HHHhccccCCCCCcceeccCCCCCCeeecCCC-----Ce
Q 022304 147 TSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLM----KNLAPLFEGVNVEPCLLHGDLWSGNISSDKNG-----EP 217 (299)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~l~~~l~~~~~~~~liHgDl~~~Nvl~~~~~-----~~ 217 (299)
... +.......+.....++...+.+.+.+ +++...+. ..+.++||||++.+||+|+++. ..
T Consensus 164 dl~--------~~~~~~~~ll~~i~d~~~r~~l~~~~~~~~~~l~~~~~--~L~~g~IH~Dl~~~Nilv~~~~~~~~~v~ 233 (972)
T PRK06149 164 DLR--------HAGPVVAHLLSHITDPAQRARIAEATRDAARRLQPLAP--ALPLQAVHLDITDDNVVGSRDADGRWQPD 233 (972)
T ss_pred chh--------hhHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhhhhhh--hCcccccCCCCCcccEEEcCCCCCCccee
Confidence 211 00111111111112222233333333 33443333 3578999999999999998652 24
Q ss_pred EEEcc-ccccCCchhhhhhhh---hc--CCC----hhhHHHhhhhCCCCCCHHHHHHHH
Q 022304 218 VILDP-ACYYGHNEAEFGMSW---CA--GFG----GSFYNSYFEVMPKQPGFEKRRDLY 266 (299)
Q Consensus 218 ~iID~-~~~~g~~~~Dla~~~---~~--~~~----~~f~~~Y~~~~~l~~~~~~r~~~~ 266 (299)
+|||| ++++++..+|||++. +. ... .+|++||.+++|+++.+.+.+..+
T Consensus 234 giIDFgD~~~~~~i~DLAial~~~~~~~~~dp~~~~~~l~GY~svrpLt~~E~~~L~~l 292 (972)
T PRK06149 234 GVIDFGDLVRTWRVADLAVTCASLLHHAGGDPFSILPAVRAYHAVRPLSEAELKALWPL 292 (972)
T ss_pred EEEEcccchhhhHHHHHHHHHHHHhcccCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHH
Confidence 89998 689999999999752 21 111 369999999999998665544443
No 20
>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]
Probab=99.88 E-value=3.1e-21 Score=167.60 Aligned_cols=233 Identities=19% Similarity=0.259 Sum_probs=148.0
Q ss_pred cCCcchHHHHHHhcCCC-cceeeeeeeCCccccceEEEEeCCccEEEEecCC----CCcchHHHHHHHHHHHHhcCCCCC
Q 022304 5 ALSDDPIREWILSEGKA-THITKICPVGGGCINLASRYGTDAGSFFVKTNRS----IGPSMFEGEALGLGAMYETRTIRA 79 (299)
Q Consensus 5 ~~~~~~i~~~l~~~~~~-~~~~~~~~~~~G~~n~~y~v~~~~g~~vlK~~~~----~~~~~~~~E~~~l~~L~~~~~~~v 79 (299)
+++...+..+|..+.++ .....++...+|++|.+|++...+.+|+||.++. .......+|+.+++.|... .+||
T Consensus 7 ~~~~~~l~~~l~~~ip~~~~~~~v~~~~~G~sn~t~~~~~~~~~~vlR~P~~~~~~~~~~~~~re~~~i~~l~~~-~vP~ 85 (321)
T COG3173 7 ALDIAALAAYLRSQIPGYAGLLIVEEISGGWSNDTFRLGDTGQKYVLRKPPRGDPVESAHDEKREYRVIAALLDV-DVPV 85 (321)
T ss_pred cCCHHHHHHHHHhhCcCcCCCceeeeccCCcccceEEEecCCceEEEecCCccccchhhhHHHhHHHHHHHhcCC-CCCC
Confidence 34567788888877332 2444566678899999999988877999995432 1234467788888888765 6888
Q ss_pred ccceeecccCC-CceEEEEecccCCCCC--------C--cHH-HHHHHHHHHHhcCCCC-CCCCCCCCCcccccccCCCC
Q 022304 80 PRPFKVGALPT-GGSYIIMEFIEFGSSR--------G--NQS-VFGKKLAEMHKAGKSS-KGFGFDVDNTIGSTPQINKW 146 (299)
Q Consensus 80 P~~~~~~~~~~-~~~~~v~e~l~G~~~~--------~--~~~-~lg~~La~lH~~~~~~-~~~~~~~~~~~g~~~~~~~~ 146 (299)
|+++..+.... |.+|.+|+|++|+... . ... ++++.|+.||+++... +.+|.+.. +.+ .+.
T Consensus 86 p~~~~~~~~~~~g~pf~v~~~veGe~~~~~~~~~~~~~~~~~~~l~~~La~LH~ida~~~~~~g~~~~-~~~--rql--- 159 (321)
T COG3173 86 PRAFGLCGEGYLGTPFYVMEWVEGEVVWSALPPESLGRQFALDALADFLAELHSIDAAGLPDPGKPNA-YRG--RQL--- 159 (321)
T ss_pred cccccccccCCCCCceEEEEEecceeccCcCCcccchHHHHHHHHHHHHHHHhCCCCcCCCCCCccCc-ccc--chh---
Confidence 88887665433 7899999999996421 2 234 8999999999999521 11111100 000 011
Q ss_pred CCCHHHHHHHhhhHHHHHHHHhhcCChHHHHHHHHHHHHHhccccCCCCCcceeccCCCCCCeeecCCCCeEEEccc-cc
Q 022304 147 TSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA-CY 225 (299)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~liHgDl~~~Nvl~~~~~~~~iID~~-~~ 225 (299)
..|...+. ... .+........+.+...++..... . +.+++++|||+|++|||+++++.++||||+ +.
T Consensus 160 -~~~~~~~~-----~~~---~~~~~~~p~~~~~~~Wl~~~~p~-~--~~~~~lvHGD~~~gNlii~~~~~~gVlDwe~~~ 227 (321)
T COG3173 160 -ARWDDEYR-----RAK---KELGGRIPLADRLIKWLEANRPP-W--AGPPVLVHGDYRPGNLIIDPGRPTGVLDWELAT 227 (321)
T ss_pred -hHHHHHHH-----HHH---HhccCCCchHHHHHHHHHhcCCC-c--CCCceeeeCCcccCCEEEeCCCeeEEEeccccc
Confidence 22222211 000 11111111122222222222211 2 468899999999999999988878999996 67
Q ss_pred cCCchhhhhhh-hh--c------CCC------hhhHHHhhhhCCCC
Q 022304 226 YGHNEAEFGMS-WC--A------GFG------GSFYNSYFEVMPKQ 256 (299)
Q Consensus 226 ~g~~~~Dla~~-~~--~------~~~------~~f~~~Y~~~~~l~ 256 (299)
+|||..||+.. +. . .++ ..+++.|.+..+++
T Consensus 228 lGDP~~Dl~~~~W~~~~~~~~~~~~~~~~~~~~~l~a~y~~~~G~~ 273 (321)
T COG3173 228 LGDPLEDLAIICWTIFDEPAARAIFRLGVPALDELLATYARARGLA 273 (321)
T ss_pred cCCcHHHHHHHHhccccchhhhhhcccCcccHHHHHHHHHHhcCcc
Confidence 99999999976 42 1 122 36788999888776
No 21
>PLN02756 S-methyl-5-thioribose kinase
Probab=99.88 E-value=3.3e-21 Score=172.27 Aligned_cols=213 Identities=19% Similarity=0.190 Sum_probs=138.1
Q ss_pred ccCCcchHHHHHHhc------CCC-cceeeeeeeCCccccceEEEEeCCccEEEEecCCC----------CcchHHHHHH
Q 022304 4 AALSDDPIREWILSE------GKA-THITKICPVGGGCINLASRYGTDAGSFFVKTNRSI----------GPSMFEGEAL 66 (299)
Q Consensus 4 ~~~~~~~i~~~l~~~------~~~-~~~~~~~~~~~G~~n~~y~v~~~~g~~vlK~~~~~----------~~~~~~~E~~ 66 (299)
..|+.+.+..||.+. ..+ ..+.+++++++|.+|.+|+|+++++++|||.+++. ...+-..|++
T Consensus 7 ~~l~~~~l~~yl~~~~~~~~~l~g~~~~l~~~eiggGn~N~VyrV~~~~~svVVKqa~p~~r~vga~wpl~~~R~~~Ea~ 86 (418)
T PLN02756 7 RPLDEKSLVEYIKATPALSSKIGNDLDDLKIKEVGDGNLNFVYIVVSSSGSFVIKQALPYIRCIGESWPMTKERAYFEAT 86 (418)
T ss_pred ccCCHHHHHHHHHHccchhhhcCCCCCCceEEEcCCCceeeEEEEEcCCccEEEEeCCccccCCCccccCCccHHHHHHH
Confidence 468899999999886 222 24568999999999999999988779999999731 2234456788
Q ss_pred HHHHHHhcCCCCCccceeecccCCCceEEEEecccCC-C-C----------CCcHHHHHHHHHHHHhcCCCCCCCCCCCC
Q 022304 67 GLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFG-S-S----------RGNQSVFGKKLAEMHKAGKSSKGFGFDVD 134 (299)
Q Consensus 67 ~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~-~-~----------~~~~~~lg~~La~lH~~~~~~~~~~~~~~ 134 (299)
.|+.+.+..+.+||+|+.++. +..+++|||+++. . + +...+++|..+++..-..+. +.....
T Consensus 87 aL~~~~~~~p~~VPkVy~~de---d~~vlvME~L~~~~~ilr~~Ll~G~~~p~~a~~ig~~la~tLf~tSd---~~~~~~ 160 (418)
T PLN02756 87 ALREHGRLCPDHVPEVYHFDR---TMALIGMRYLEPPHIILRKGLIAGIEYPLLAEHMSDYMAKTLFFTSL---LYHDTT 160 (418)
T ss_pred HHHHhhhcCCCCCCeEEEECC---CCCEEEEeecCCcceehhhhhccCCCCHHHHHHHHHHHHHHHhhcch---hccChh
Confidence 888787766789999999985 5789999999883 2 2 13468899999987322221 111100
Q ss_pred C-------cc-------------cccccCCCCCCCHHHHHHHhhhHHHHHHHHhh-cCChHHHHHHHHHHHHHhccccCC
Q 022304 135 N-------TI-------------GSTPQINKWTSNWIEFYAEHRLGYQLKLALDQ-YGDSTIYQRGHRLMKNLAPLFEGV 193 (299)
Q Consensus 135 ~-------~~-------------g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~~ 193 (299)
. +. -..|..+.....| ..+.+....+. ..++.+...+.+ ++..+.
T Consensus 161 ~kk~~~~~f~~N~elc~itEdlvFt~Py~~~~~n~~--------~~p~l~~~~~~l~~d~~L~~~v~~----Lk~~f~-- 226 (418)
T PLN02756 161 EHKRAVAEFCGNVELCRLTEQVVFSDPYKVSQYNRW--------TSPYLDRDAEAVREDNILKLEIAE----LKSMFC-- 226 (418)
T ss_pred hhhHHHHHhcCCHHHHHHHHhheeccccccchhcCC--------CCcchHHHHHHHhcCHHHHHHHHH----HHHHHH--
Confidence 0 00 0001100000001 11222211111 123333333333 343333
Q ss_pred CCCcceeccCCCCCCeeecCCCCeEEEccc-cccCCchhhhhhhh
Q 022304 194 NVEPCLLHGDLWSGNISSDKNGEPVILDPA-CYYGHNEAEFGMSW 237 (299)
Q Consensus 194 ~~~~~liHgDl~~~Nvl~~~~~~~~iID~~-~~~g~~~~Dla~~~ 237 (299)
...++|+|||+|+|||++++++ +.+||++ +.|||+++|++++.
T Consensus 227 ~~~~~L~HGDl~~g~i~~~~~~-~~~id~ef~~~g~~~~d~g~~~ 270 (418)
T PLN02756 227 ERAQALVHGDLHTGSVMVTPDS-TQVIDPEFAFYGPMGFDIGAFL 270 (418)
T ss_pred hcccceeecCCCCCcEEEcCCC-ceEecchhhccCchHHhHHHHH
Confidence 2578999999999999998776 8999987 78999999999853
No 22
>PRK06148 hypothetical protein; Provisional
Probab=99.88 E-value=5.5e-21 Score=191.15 Aligned_cols=245 Identities=13% Similarity=0.100 Sum_probs=163.6
Q ss_pred ccCCcchHHHHHHhcCCCcceeeeeeeCCccccceEEEEeCCc-cEEEEecCCC-CcchHHHHHHHHHHHHhc-CCCCCc
Q 022304 4 AALSDDPIREWILSEGKATHITKICPVGGGCINLASRYGTDAG-SFFVKTNRSI-GPSMFEGEALGLGAMYET-RTIRAP 80 (299)
Q Consensus 4 ~~~~~~~i~~~l~~~~~~~~~~~~~~~~~G~~n~~y~v~~~~g-~~vlK~~~~~-~~~~~~~E~~~l~~L~~~-~~~~vP 80 (299)
..++.+++.+.+.++ +|.. .++++++ |..|.+|+|++++| +||+|+.++. ....++.|.+++.+|+++ .++|||
T Consensus 9 p~~s~~~~~~~~~~~-ygl~-~~~~~L~-s~~d~nf~v~~~~g~~yVLKi~~~~~~~~~~~~q~~~L~hL~~~~~glpvP 85 (1013)
T PRK06148 9 PEFTTKDAEALLAQH-FGIS-ATATPLD-GERDLNFRLTTDDGADYILKIVNPSEPRVESDFQTAALDHLAAVAPDLPVP 85 (1013)
T ss_pred CCCCHHHHHHHHHHH-cCCc-eEEeecC-CcCCceEEEEeCCCCeEEEEEcCCccchhHHHHHHHHHHHHHhhCCCCCcC
Confidence 357889999999888 4433 3467885 56799999999877 8999999853 345567788899999875 468999
Q ss_pred cceeecccC--------CC--ceEEEEecccCCCCC-------CcHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccC
Q 022304 81 RPFKVGALP--------TG--GSYIIMEFIEFGSSR-------GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQI 143 (299)
Q Consensus 81 ~~~~~~~~~--------~~--~~~~v~e~l~G~~~~-------~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~g~~~~~ 143 (299)
+|+...+.. +| ..+.+++|++|.++. ...+++|+.|++||..... |..+.. . ..
T Consensus 86 ~~i~t~~G~~~~~v~~~~G~~~~vrLl~~l~G~~l~~~~~~t~~~~~~lG~~larlh~al~~---F~~p~~-----~-r~ 156 (1013)
T PRK06148 86 RLIPSLSGASLASAQDPDGEPRLLRLLSWLPGTPLAEAAPRTEALLDNLGRALGRLDRALQG---FMHPGA-----L-RD 156 (1013)
T ss_pred eeeecCCCCeEEEeecCCCceEEEEEEeccCCCcHHhccCCCHHHHHHHHHHHHHHHHHHhc---CCCCCc-----c-cc
Confidence 999764331 23 457899999998752 2478999999999999753 432211 0 11
Q ss_pred CCCCCCHHHHHHHhhhHHHHHHHHhhcCChHHHHHHHHHHHHHhc----cccCCCCCcceeccCCCCCCeeecCCC---C
Q 022304 144 NKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAP----LFEGVNVEPCLLHGDLWSGNISSDKNG---E 216 (299)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----~l~~~~~~~~liHgDl~~~Nvl~~~~~---~ 216 (299)
..|......+ +...+. ...++..++.++++++.+.+ .+. ..|.++||||++++|||+++++ .
T Consensus 157 ~~Wdl~~~~~-----l~~~l~----~i~d~~~r~~l~~~~~~~~~~v~p~l~--~Lp~~vIHgDln~~NiLv~~~~~~~i 225 (1013)
T PRK06148 157 LDWDLRHAGR-----ARDRLH----FIDDPEDRALVERFLARFERNVAPRLA--ALPAQVIHNDANDYNILVDADDGERI 225 (1013)
T ss_pred cccccccchh-----hhhhhh----hcCCHHHHHHHHHHHHHHHHHHHHHHh--cCCcceECCCCCcccEEEcCCCCcce
Confidence 2342211111 111111 11233334444444444332 233 3578899999999999998774 4
Q ss_pred eEEEcc-ccccCCchhhhhhhh--h--cCC-C----hhhHHHhhhhCCCCCCHHHHHHHHHHHHH
Q 022304 217 PVILDP-ACYYGHNEAEFGMSW--C--AGF-G----GSFYNSYFEVMPKQPGFEKRRDLYMLYHY 271 (299)
Q Consensus 217 ~~iID~-~~~~g~~~~Dla~~~--~--~~~-~----~~f~~~Y~~~~~l~~~~~~r~~~~~l~~~ 271 (299)
.+|||| +++++++.+|+|+.. + ... + .+|++||.+++|+++.+.+.+..+...+.
T Consensus 226 sGiIDFgDa~~~~~v~DLAialay~~~~~~~p~~~~~a~laGY~sv~pLt~~E~~~L~~li~~R~ 290 (1013)
T PRK06148 226 SGLIDFGDAVHAPRICEVAIAAAYAILDHPDPIGAAAALVAGYHAVYPLQAQELDLLFDLIRMRL 290 (1013)
T ss_pred EEEEECcccccccHHHHHHHHHHHHhcCCCChHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHH
Confidence 689999 689999999999753 1 111 1 37999999999999866555554433333
No 23
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=99.88 E-value=2.3e-21 Score=164.62 Aligned_cols=195 Identities=16% Similarity=0.187 Sum_probs=122.0
Q ss_pred eeeeeCCccccceEEEEeCC---ccEEEEecCCCCc--chHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEecc
Q 022304 26 KICPVGGGCINLASRYGTDA---GSFFVKTNRSIGP--SMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI 100 (299)
Q Consensus 26 ~~~~~~~G~~n~~y~v~~~~---g~~vlK~~~~~~~--~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l 100 (299)
+++++.+|.+|.+|+|++.+ ++||+|+++.... ...+.|..+++.|+.. ++ +|+++.... .+++|||+
T Consensus 2 ~i~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~~~~d~~~E~~~~~~l~~~-gl-~P~v~~~~~-----~~~l~e~i 74 (235)
T cd05157 2 TFKRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTELIIDRERELRIHKLLSKH-GL-APKLYATFQ-----NGLIYEFI 74 (235)
T ss_pred eEEEcCCcccceEEEEEcCCCCCCeEEEEEccCCccceecHHHHHHHHHHHHhC-CC-CCeEEEEeC-----CcEEEEee
Confidence 67899999999999999873 5899999875432 2346899999999876 45 799986542 25899999
Q ss_pred cCCCCC-------CcHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCCCCHHHHHHHhhhHHHHHHHHh--hcC
Q 022304 101 EFGSSR-------GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALD--QYG 171 (299)
Q Consensus 101 ~G~~~~-------~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 171 (299)
+|.++. ....++|+.|+++|+...+. .+..+. .+....| +....+... +......... ...
T Consensus 75 ~G~~l~~~~~~~~~~~~~la~~l~~lH~~~~~~---~~~~~~----~~~~~~~-~~i~~~~~~--~~~~~~~~~~~~~~~ 144 (235)
T cd05157 75 PGRTLEPEDLRNPKIYRLIARELAKLHSIKPPE---AISSPG----TPKPILW-PTIRKWINL--VPTEFKKPEKFQKKT 144 (235)
T ss_pred CCCcCCHHHccChHHHHHHHHHHHHHhcccccc---cccccC----CCCCcHH-HHHHHHHHH--hHHhhccccchhhhh
Confidence 998753 24688999999999988632 111000 0000001 011111110 0000000000 000
Q ss_pred ChHHHHHHHHHHHHHhccccCCCCCcceeccCCCCCCeeecC-CCCeEEEccc-cccCCchhhhhhhh
Q 022304 172 DSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDK-NGEPVILDPA-CYYGHNEAEFGMSW 237 (299)
Q Consensus 172 ~~~~~~~~~~~~~~l~~~l~~~~~~~~liHgDl~~~Nvl~~~-~~~~~iID~~-~~~g~~~~Dla~~~ 237 (299)
.......+.+.+..+...+.....+.++||||++++|||+++ ++.+++|||+ +.+|+|.+|||.+.
T Consensus 145 ~~~~~~~l~~~~~~l~~~l~~~~~~~~l~H~Dl~~~Nil~~~~~~~~~lIDwe~a~~~~~~~Dla~~~ 212 (235)
T cd05157 145 KAISFEQLRDEISWLKELLSALNSPIVFCHNDLLSGNIIYNEEKNSVKFIDYEYAGYNYRAFDIANHF 212 (235)
T ss_pred ccccHHHHHHHHHHHHHHhcccCCCEEEEcCCCCcCcEEEeCCCCCEEEEEcccCCcCchheeHHHHH
Confidence 001122333333444433333235789999999999999987 4668999996 88999999999763
No 24
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.88 E-value=5.2e-21 Score=160.61 Aligned_cols=192 Identities=19% Similarity=0.234 Sum_probs=128.2
Q ss_pred eeeeeCCccccceEEEEeCC-ccEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCCccceeecccC--CCceEEEEe
Q 022304 26 KICPVGGGCINLASRYGTDA-GSFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP--TGGSYIIME 98 (299)
Q Consensus 26 ~~~~~~~G~~n~~y~v~~~~-g~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~--~~~~~~v~e 98 (299)
.++++++|..|.+|++++.+ .+||+|++... ....++.|.++++.|+.. ++++|+++...... .+..+++|+
T Consensus 2 ~~~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~-~~~vp~~~~~~~~~~~~~~~~~v~e 80 (223)
T cd05154 2 EVRQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGT-GVPVPKVLALCEDPSVLGTPFYVME 80 (223)
T ss_pred cceecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCC-CCCCCCEEEECCCCCccCCceEEEE
Confidence 46789999999999999987 59999998753 245688999999999886 78999999876542 246799999
Q ss_pred cccCCCCCC--------------cHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCCCCHHHHHHHhhhHHHHH
Q 022304 99 FIEFGSSRG--------------NQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLK 164 (299)
Q Consensus 99 ~l~G~~~~~--------------~~~~lg~~La~lH~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (299)
|++|.++.. .+.++++.|++||+.+.+. .+.... + . . ..+.. ..+....+
T Consensus 81 ~i~G~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~--~~~~~~---~---~---~-~~~~~----~~~~~~~~ 144 (223)
T cd05154 81 RVDGRVLRDRLLRPELSPEERRALARALADTLAALHSVDPAA--VGLGDL---G---R---P-GGYLE----RQVARWRR 144 (223)
T ss_pred EeCCEecCCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCChhh--cCCccc---C---C---C-CchHH----HHHHHHHH
Confidence 999986521 1478999999999988632 221100 0 0 0 01100 11111111
Q ss_pred HHHhhcCChHHHHHHHHHHHHHhccccCCCCCcceeccCCCCCCeeecC--CCCeEEEccc-cccCCchhhhhhhh
Q 022304 165 LALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDK--NGEPVILDPA-CYYGHNEAEFGMSW 237 (299)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~liHgDl~~~Nvl~~~--~~~~~iID~~-~~~g~~~~Dla~~~ 237 (299)
.+....... ...+.++.+.+...... ..+.++||||+|++|||+++ ++.++||||+ +.+|+|++|++.++
T Consensus 145 ~~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~g~~~~Dla~~~ 217 (223)
T cd05154 145 QYDASRTDE--PPAMERLLRWLEAHLPA-DSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATLGDPLADLGWLL 217 (223)
T ss_pred HHHhhcccc--cHHHHHHHHHHHhhCCC-CCCcEEEECCCCcccEEEcCCCCcEEEEEeccccccCChHHHHHHHH
Confidence 111110000 11223333333333332 25789999999999999987 4557899996 68999999999763
No 25
>TIGR02904 spore_ysxE spore coat protein YsxE. Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.
Probab=99.87 E-value=3.9e-21 Score=169.75 Aligned_cols=236 Identities=12% Similarity=0.081 Sum_probs=144.1
Q ss_pred HHHHhcCCCcceeeeeeeCCccccceEEEEeCCccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCCccce-eecccC--
Q 022304 13 EWILSEGKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPF-KVGALP-- 89 (299)
Q Consensus 13 ~~l~~~~~~~~~~~~~~~~~G~~n~~y~v~~~~g~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~~~vP~~~-~~~~~~-- 89 (299)
.+|.++ |..+.+++++ .|.||+|.|++|.|+||..... ...+.....++++|+++ |+++|.++ .+.+..
T Consensus 3 ~vl~~Y--~l~v~~i~~~----~~~v~~v~T~~G~~~Lk~~~~~-~~~l~~~~~~~~~L~~~-G~~~~~~~~~t~~G~~~ 74 (309)
T TIGR02904 3 AVLEHY--GLQPEEMEQV----TGKLFKVYTDQGVFALKKLYAD-RNTIESFVSQIQVLSEK-GFSRIVPVYPTKDGSYY 74 (309)
T ss_pred hhHhhc--CCCceeeecc----cCcEEEEEeCCCCEEEEEeccc-hHhHHHHHHHHHHHHHc-CCCcCCceeecCCCCee
Confidence 445444 5567777554 4578999999999999998742 34466788889999887 68766666 443322
Q ss_pred ---CCceEEEEecccCCCC---CCcHHHHHHHHHHHHhcCCCCCCCCCCCCCccccccc-CCCCCCCHHHHHHHhhhHHH
Q 022304 90 ---TGGSYIIMEFIEFGSS---RGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQ-INKWTSNWIEFYAEHRLGYQ 162 (299)
Q Consensus 90 ---~~~~~~v~e~l~G~~~---~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~ 162 (299)
.+..+++++|++|... ...+.++|+.||+||.++....... . ...+. ...+...|..... .+...
T Consensus 75 ~~~~~~~~~L~~wi~G~~~~~~~~~~~~~~~~LA~lH~~~~~~~~~~--~----~~~~~~~~~~~~~~~~~~~--~l~~~ 146 (309)
T TIGR02904 75 LFHGHFLYYLMPWLDIERNEERNYQHESMFQELALLHRKTVKTERVT--E----EELKKHYERTLSRWENIPE--GLEEF 146 (309)
T ss_pred eEECCEEEEEeCCcccccccCCHHHHHHHHHHHHHHHHhhhCCCccc--H----hHHHhHHHHHHHHHHHHHH--HHHHH
Confidence 4678999999999533 1357999999999999997411110 0 00000 0111112221110 01111
Q ss_pred HHHHHh-hcCC----------hHHHHHHHHHHHHHhccc----cCCCCCcceeccCCCCCCeeecCCCCeEEEccc-ccc
Q 022304 163 LKLALD-QYGD----------STIYQRGHRLMKNLAPLF----EGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA-CYY 226 (299)
Q Consensus 163 ~~~~~~-~~~~----------~~~~~~~~~~~~~l~~~l----~~~~~~~~liHgDl~~~Nvl~~~~~~~~iID~~-~~~ 226 (299)
...... ...+ ....+.++.+.+.+.... .....+.++||||++++|+|+++++..+||||+ +++
T Consensus 147 ~~~~~~~~~~~~fe~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~lcHgD~~~~Nvl~~~~~~~~iIDfd~~~~ 226 (309)
T TIGR02904 147 IVEAEAKWYMSPFELQACTYYHEVMQAAEFAQNKLEDWHEATKEKESWRTVLVHGKLSLSHFLYDETRGGYFINFEKASF 226 (309)
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcceeeeCCCCcHHhEEEcCCCCEEEEEhhhccc
Confidence 111110 0001 011122333333222211 111357799999999999999888778999995 789
Q ss_pred CCchhhhhhhhh-----cCCC----hhhHHHhhhhCCCCCCHHHHHH
Q 022304 227 GHNEAEFGMSWC-----AGFG----GSFYNSYFEVMPKQPGFEKRRD 264 (299)
Q Consensus 227 g~~~~Dla~~~~-----~~~~----~~f~~~Y~~~~~l~~~~~~r~~ 264 (299)
|+|++||+.++. ..+. ..++++|++++|++++..+.+.
T Consensus 227 d~~~~DLa~~~~~~~~~~~~~~~~~~~~l~~Y~~~~pL~~~E~~~l~ 273 (309)
T TIGR02904 227 ASPLTDLAAFFRRSFGTYPQPIDEMFEWFYTYEKTLPLTDEEIHLLT 273 (309)
T ss_pred CCcHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhcCCCCHHHHHHHH
Confidence 999999996531 1232 5899999999999975433333
No 26
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=99.86 E-value=2.3e-20 Score=164.41 Aligned_cols=189 Identities=14% Similarity=0.126 Sum_probs=119.8
Q ss_pred eeeeeCCccccceEEEEeCC--------ccEEEEecCCCC--cchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEE
Q 022304 26 KICPVGGGCINLASRYGTDA--------GSFFVKTNRSIG--PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI 95 (299)
Q Consensus 26 ~~~~~~~G~~n~~y~v~~~~--------g~~vlK~~~~~~--~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~ 95 (299)
+++++.+|.+|.+|+|++.+ ++||+|++.... ......|.++++.|++. + .+|+++..... .+
T Consensus 2 ~i~~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~~~~~~r~~E~~~~~~l~~~-g-~~P~~~~~~~~-----~~ 74 (302)
T cd05156 2 EVSKISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSVELLIDRERELVVFARLSER-N-LGPKLYGIFPN-----GR 74 (302)
T ss_pred eEEEecCcccceeEEEEcCCcccccCCCCeEEEEEecCCCcceechHHHHHHHHHHHhC-C-CCCceEEEeCC-----Cc
Confidence 57899999999999999865 489999987642 24467899999999986 3 58999988642 46
Q ss_pred EEecccCCCCC-------CcHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCCCCHHHHHHHhhhHHHHHHHHh
Q 022304 96 IMEFIEFGSSR-------GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALD 168 (299)
Q Consensus 96 v~e~l~G~~~~-------~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (299)
+++|++|..+. ....++|+.|++||+...+. .+... . ..+ ..|.. +. ...........
T Consensus 75 v~e~i~G~~l~~~~~~~~~~~~~ia~~L~~lH~~~~~~--~~~~~--~--~~~------~~~~~-~~--~~~~~~~~~~~ 139 (302)
T cd05156 75 IEEFIPSRTLTTEELRDPDISAEIARRMAKLHSIVVPL--SPEER--D--LTP------AIWKL-LK--QWLDLAETVIE 139 (302)
T ss_pred hhheeCCCcCCHhHcCCcHHHHHHHHHHHHhhCCCCCC--CCCcC--c--ccc------hHHHH-HH--HHHHHhhhhhh
Confidence 89999998753 24689999999999998631 01000 0 000 11110 00 00000000000
Q ss_pred -------hcCCh---HHHHHHHHHHHHHhcccc-CCCCCcceeccCCCCCCeeecCC----CCeEEEccc-cccCCchhh
Q 022304 169 -------QYGDS---TIYQRGHRLMKNLAPLFE-GVNVEPCLLHGDLWSGNISSDKN----GEPVILDPA-CYYGHNEAE 232 (299)
Q Consensus 169 -------~~~~~---~~~~~~~~~~~~l~~~l~-~~~~~~~liHgDl~~~Nvl~~~~----~~~~iID~~-~~~g~~~~D 232 (299)
..... ...+.+.++.+.+..... ....+.++||||++++|||++++ +.+.+|||+ +.+|+|++|
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya~~~~p~~D 219 (302)
T cd05156 140 IVDSDSEKLLEVELSLFLEDEAKYLRFLLESTSEESGSPVVFCHNDLQEGNILLLNPSSETKKLVLIDFEYASYNYRGFD 219 (302)
T ss_pred hcccchhhhhhhhHHHHHHHHHHHHHHHHhhccCCCCCCceEEecCCCcCeEEecCCCCCCCcEEEEeeCCCCCCCcHHH
Confidence 00000 011122222222222111 01367899999999999999874 668999995 889999999
Q ss_pred hhhh
Q 022304 233 FGMS 236 (299)
Q Consensus 233 la~~ 236 (299)
||.+
T Consensus 220 lA~~ 223 (302)
T cd05156 220 IANH 223 (302)
T ss_pred HHHH
Confidence 9974
No 27
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.85 E-value=4.4e-20 Score=148.65 Aligned_cols=152 Identities=21% Similarity=0.217 Sum_probs=111.3
Q ss_pred eeeeeCCccccceEEEEeCCccEEEEecCCCC--cchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEecccCC
Q 022304 26 KICPVGGGCINLASRYGTDAGSFFVKTNRSIG--PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFG 103 (299)
Q Consensus 26 ~~~~~~~G~~n~~y~v~~~~g~~vlK~~~~~~--~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~ 103 (299)
.++++++|.+|.+|++++.+++|++|++.... ...++.|+..++.+++. ..+|+++..+. ...+++|||++|.
T Consensus 2 ~~~~l~~G~~~~vy~~~~~~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~~~--~~~P~~~~~~~---~~~~lv~e~i~G~ 76 (170)
T cd05151 2 HISPLKGGMTNKNYRVEVANKKYVVRIPGNGTELLINRENEAENSKLAAEA--GIGPKLYYFDP---ETGVLITEFIEGS 76 (170)
T ss_pred ceeecCCcccCceEEEEECCeEEEEEeCCCCcccccCHHHHHHHHHHHHHh--CCCCceEEEeC---CCCeEEEEecCCC
Confidence 47899999999999999988899999987543 24468899999999875 34799998763 3568999999998
Q ss_pred CCCC-------cHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCCCCHHHHHHHhhhHHHHHHHHhhcCChHHH
Q 022304 104 SSRG-------NQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIY 176 (299)
Q Consensus 104 ~~~~-------~~~~lg~~La~lH~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (299)
++.. ...++++.|++||+..
T Consensus 77 ~l~~~~~~~~~~~~~l~~~l~~LH~~~----------------------------------------------------- 103 (170)
T cd05151 77 ELLTEDFSDPENLEKIAKLLKKLHSSP----------------------------------------------------- 103 (170)
T ss_pred ccccccccCHHHHHHHHHHHHHHhCCC-----------------------------------------------------
Confidence 6521 0112222222222211
Q ss_pred HHHHHHHHHHhccccCCCCCcceeccCCCCCCeeecCCCCeEEEccc-cccCCchhhhhhhhh-cCCC----hhhHHHhh
Q 022304 177 QRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA-CYYGHNEAEFGMSWC-AGFG----GSFYNSYF 250 (299)
Q Consensus 177 ~~~~~~~~~l~~~l~~~~~~~~liHgDl~~~Nvl~~~~~~~~iID~~-~~~g~~~~Dla~~~~-~~~~----~~f~~~Y~ 250 (299)
..+.++||||++++||+++ ++...+|||+ +.+|+|.+|++.++. ..++ ..|++.|.
T Consensus 104 -----------------~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~~~~~~Dla~~~~~~~~~~~~~~~~~~~y~ 165 (170)
T cd05151 104 -----------------LPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGMNDPLFDLANFFSEAKLSEDQEEELLEAYF 165 (170)
T ss_pred -----------------CCCceeecCCCCcCcEEEE-CCeEEEEecccccCCChHHHHHHHHHhcCCCHHHHHHHHHHHh
Confidence 1267999999999999998 4458899996 679999999997642 3333 47899998
Q ss_pred hhC
Q 022304 251 EVM 253 (299)
Q Consensus 251 ~~~ 253 (299)
...
T Consensus 166 ~~~ 168 (170)
T cd05151 166 GRE 168 (170)
T ss_pred CCC
Confidence 654
No 28
>PRK12396 5-methylribose kinase; Reviewed
Probab=99.84 E-value=6.3e-20 Score=163.16 Aligned_cols=213 Identities=15% Similarity=0.154 Sum_probs=138.6
Q ss_pred ccCCcchHHHHHHhc-CC--CcceeeeeeeCCccccceEEEEeC--CccEEEEecCCC---------CcchHHHHHHHHH
Q 022304 4 AALSDDPIREWILSE-GK--ATHITKICPVGGGCINLASRYGTD--AGSFFVKTNRSI---------GPSMFEGEALGLG 69 (299)
Q Consensus 4 ~~~~~~~i~~~l~~~-~~--~~~~~~~~~~~~G~~n~~y~v~~~--~g~~vlK~~~~~---------~~~~~~~E~~~l~ 69 (299)
..|+.+++.+++.+. +. .....+++++|+|..|.||||... .+++|||.+.+. +..+...|+++|+
T Consensus 8 ~~l~~~~v~~yl~~~l~~~~~~~~~~~~eigdGnlN~VfrV~~~~~~~svIVKQAlp~vRv~~swpL~~~R~~~E~~aL~ 87 (409)
T PRK12396 8 FLMEANDVIVYVKEKLSKFEHAKGLQCKEIGDGNLNYVFRVWDEQKNISVIVKQAGDTARISDEFKLSTNRIRIESDVLQ 87 (409)
T ss_pred eeCCHhHHHHHHHHhcCCCCCcccceeeEcCCCceEEEEEEeeCCCCceEEEEeccHhhccCCCCCCChHHHHHHHHHHH
Confidence 368999999999885 32 222335899999999999999864 458999988541 2355678999999
Q ss_pred HHHhcCCCCCccceeecccCCCceEEEEecccCCC-----------CCCcHHHHHHHHHHHHhcCCCCCCCCCCCCCccc
Q 022304 70 AMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGS-----------SRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIG 138 (299)
Q Consensus 70 ~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~~-----------~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~g 138 (299)
.+++..+-.||++|.++. ....++||+++... .+..++++|..||+.|-..+. +.+.......
T Consensus 88 ~~~~~~P~~VP~vy~~D~---e~~~~vMEdL~~~~ilR~~Li~G~~~p~~A~~ig~fla~tlf~tSd---~~l~~~~kk~ 161 (409)
T PRK12396 88 LEEELAPGLVPKVYLFDS---VMNCCVMEDLSDHTILRTALINHEIFPRLADDLTTFLVNTLLLTSD---VVMNHKEKKE 161 (409)
T ss_pred HHHhhCCCcCCeEEEECc---HHhhHHHHhCcccHHHHHHHHcCCcChhHHHHHHHHHHHHHhhcch---hccChHHHHH
Confidence 998876667999999984 58899999997632 124578999999999986542 2211110000
Q ss_pred -------------------ccccCCCC-CCCHHHHHHHhhhHHHHHHHHhh-cCChHHHHHHHHHHHHHhccccCCCCCc
Q 022304 139 -------------------STPQINKW-TSNWIEFYAEHRLGYQLKLALDQ-YGDSTIYQRGHRLMKNLAPLFEGVNVEP 197 (299)
Q Consensus 139 -------------------~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 197 (299)
..|..+.. ..++ ..+.+....+. ..+..+...+. +++..+. ....
T Consensus 162 ~v~~f~N~eLc~itedlvft~Py~~~~~~n~~--------~~~~~~~~~~~l~~D~~Lk~ev~----~Lk~~F~--~~~~ 227 (409)
T PRK12396 162 LVKNYINPELCEITEDLVYAEPFTNHNKRNEL--------FPLNEGWIREHIYSDKELRLEVA----KLKFSFM--TNAQ 227 (409)
T ss_pred hhHhcCCHHHHHHhcccccccCcccchhccCC--------CChhhHHHHHHHhcCHHHHHHHH----HHHHHHH--hcch
Confidence 01110000 0000 01111111111 12333333333 3343333 2467
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccc-cccCCchhhhhhhh
Q 022304 198 CLLHGDLWSGNISSDKNGEPVILDPA-CYYGHNEAEFGMSW 237 (299)
Q Consensus 198 ~liHgDl~~~Nvl~~~~~~~~iID~~-~~~g~~~~Dla~~~ 237 (299)
+|||||||+||||+++++ +.|||++ ++|||+.||++.+.
T Consensus 228 aLlHGDlHtGSI~v~~~~-~kvIDpEFAfyGP~gFDiG~~l 267 (409)
T PRK12396 228 ALIHGDLHTGSVFVKNDS-TKVIDPEFAFYGPMGYDIGNVM 267 (409)
T ss_pred hhccCcCCCCCEEecCCc-eEEEcccccccCCcHHHHHHHH
Confidence 999999999999998765 8999986 68999999999763
No 29
>PLN02236 choline kinase
Probab=99.81 E-value=6e-18 Score=151.15 Aligned_cols=199 Identities=19% Similarity=0.157 Sum_probs=128.5
Q ss_pred cchHHHHHHhcCCC------cceeeeeeeCCccccceEEEEeCC------ccEEEEecCCCCcch--HHHHHHHHHHHHh
Q 022304 8 DDPIREWILSEGKA------THITKICPVGGGCINLASRYGTDA------GSFFVKTNRSIGPSM--FEGEALGLGAMYE 73 (299)
Q Consensus 8 ~~~i~~~l~~~~~~------~~~~~~~~~~~G~~n~~y~v~~~~------g~~vlK~~~~~~~~~--~~~E~~~l~~L~~ 73 (299)
...|.+++++.... .+..+++++.||.+|.+|+++..+ .+|++|+++..+... .+.|..+++.|++
T Consensus 16 ~~~~~~~~~~~~~~w~~~~~~~~~~i~~l~gGlTN~~y~v~~~~~~~~~~~~~v~Ri~g~~t~~~idR~~E~~~~~~l~~ 95 (344)
T PLN02236 16 PDELKRILHSLASKWGDVVDDEALQVIPLKGAMTNEVFQIKWPTKEGNLGRKVLVRIYGEGVELFFDRDDEIRTFECMSR 95 (344)
T ss_pred hHHHHHHHHHhcchhcCCCCcCcEEEEEcCCcccceeEEEEeCCCCCCCCCeEEEEEccCCCCeeechHHHHHHHHHHHH
Confidence 44566666665322 346789999999999999998532 379999998643221 3679999999988
Q ss_pred cCCCCCccceeecccCCCceEEEEecccCCCCC-------CcHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCC
Q 022304 74 TRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSR-------GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKW 146 (299)
Q Consensus 74 ~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~~~~-------~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~g~~~~~~~~ 146 (299)
. ++ .|+++..... | .+.+|++|.++. ....++++.|+++|+...+.. . . +
T Consensus 96 ~-gl-~P~~~~~~~~--g---~v~efi~g~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~----~-------~-----~ 152 (344)
T PLN02236 96 H-GQ-GPRLLGRFPN--G---RVEEFIHARTLSAADLRDPEISALIAAKLREFHSLDMPGP----K-------N-----V 152 (344)
T ss_pred c-CC-CCceEEEECC--c---eEEEeeCCCCCCHHHcCChHHHHHHHHHHHHHhCCCCCCC----C-------C-----c
Confidence 6 44 8999977632 2 689999998763 235799999999999875310 0 0 0
Q ss_pred CCCHHHHHHHhhhHHHHHHHHhhcCC----hHHHHHHHHHHHHHhccccCCCCCcceeccCCCCCCeeecCC-CCeEEEc
Q 022304 147 TSNWIEFYAEHRLGYQLKLALDQYGD----STIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKN-GEPVILD 221 (299)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~~l~~~~~~~~liHgDl~~~Nvl~~~~-~~~~iID 221 (299)
..|. ++..+++...+...+ ......+.+.++.+...+.....+.++||+|++++|||++++ +...+||
T Consensus 153 -~~~~------~i~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~L~~~~~~~~~~~~~cH~Dl~~~Nil~~~~~~~~~lID 225 (344)
T PLN02236 153 -LLWD------RLRNWLKEAKNLCSPEEAKEFRLDSLEDEINLLEKELSGDDQEIGFCHNDLQYGNIMIDEETRAITIID 225 (344)
T ss_pred -hHHH------HHHHHHHHHHhhcCcchhhhcCHHHHHHHHHHHHHHhcccCCCceEEeCCCCcCcEEEeCCCCcEEEEe
Confidence 1111 111111111110000 000122333334444333322357799999999999999763 5689999
Q ss_pred cc-cccCCchhhhhhh
Q 022304 222 PA-CYYGHNEAEFGMS 236 (299)
Q Consensus 222 ~~-~~~g~~~~Dla~~ 236 (299)
|+ +.+|+|.+|||..
T Consensus 226 ~Eya~~~~~~~Dia~~ 241 (344)
T PLN02236 226 YEYASYNPVAYDIANH 241 (344)
T ss_pred ehhccccchHHHHHHH
Confidence 96 7899999999974
No 30
>PLN02421 phosphotransferase, alcohol group as acceptor/kinase
Probab=99.81 E-value=2.1e-18 Score=153.36 Aligned_cols=200 Identities=17% Similarity=0.228 Sum_probs=129.8
Q ss_pred ceeeeeeeCCccccceEEEEeCCc-----cEEEEecCCCCcc--hHHHHHHHHHHHHhcCCCCCccceeecccCCCceEE
Q 022304 23 HITKICPVGGGCINLASRYGTDAG-----SFFVKTNRSIGPS--MFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI 95 (299)
Q Consensus 23 ~~~~~~~~~~G~~n~~y~v~~~~g-----~~vlK~~~~~~~~--~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~ 95 (299)
.-++++++.||.+|.+|+|+..++ +||+|+++..+.. .-+.|..+++.|++. ++ .|+++..... | +
T Consensus 15 ~~i~i~~l~gGlTN~~~~v~~~~~~~~~~~~v~Ri~g~~t~~~IdR~~E~~il~~l~~~-gl-~P~~l~~~~~--G---~ 87 (330)
T PLN02421 15 SDFSVERISGGITNLLLKVSVKEENGNEVSVTVRLFGPNTDYVIDRERELQAIKYLSAA-GF-GAKLLGVFGN--G---M 87 (330)
T ss_pred CceEEEEeCCcccceEEEEEecCCCCCCceEEEEEecCCcCeEechHHHHHHHHHHHhc-CC-CCceeEEeCC--c---E
Confidence 467899999999999999986432 8999999864322 236799999999886 34 4888877532 2 6
Q ss_pred EEecccCCCCC-------CcHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCCCCHHHHHHHhhhHHHHHHHHh
Q 022304 96 IMEFIEFGSSR-------GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALD 168 (299)
Q Consensus 96 v~e~l~G~~~~-------~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (299)
+.+|++|.++. .....+++.|+++|+...+.. ..+ .-|. ++..++..+..
T Consensus 88 i~~fi~g~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~----~~~-------------~~~~------~i~~y~~~~~~ 144 (330)
T PLN02421 88 IQSFINARTLTPSDMRKPKVAAEIAKELRRLHQVEIPGS----KEP-------------QLWN------DIFKFYEKAST 144 (330)
T ss_pred eehhhcCCCCChHHCCCHHHHHHHHHHHHHHhCCCCCCC----CCC-------------cHHH------HHHHHHHHhhh
Confidence 99999998763 246899999999999875310 000 1111 11111111110
Q ss_pred -hcCChHH--------HHHHHHHHHHHhccccCCCCCcceeccCCCCCCeeecCC-CCeEEEccc-cccCCchhhhhhhh
Q 022304 169 -QYGDSTI--------YQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKN-GEPVILDPA-CYYGHNEAEFGMSW 237 (299)
Q Consensus 169 -~~~~~~~--------~~~~~~~~~~l~~~l~~~~~~~~liHgDl~~~Nvl~~~~-~~~~iID~~-~~~g~~~~Dla~~~ 237 (299)
....+.. ...+.+.+..++.++.....+.++||+|++++|||++++ +.+.+|||+ +.+++|.+|||...
T Consensus 145 ~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lID~EYag~nd~~fDIa~~f 224 (330)
T PLN02421 145 VKFEDPEKQKKYETISFEELRDEIVELKEITDSLKAPVVFAHNDLLSGNLMLNEDEGKLYFIDFEYGSYSYRGYDIGNHF 224 (330)
T ss_pred cccCcHHHhhhhcccCHHHHHHHHHHHHHHhccCCCCeEEEECCCCcccEEEeCCCCcEEEEcccccCCCccHHHHHHHH
Confidence 0001100 122233333344444332467899999999999999743 568999995 89999999999753
Q ss_pred h--cC-------CC-----hhhHHHhhhh
Q 022304 238 C--AG-------FG-----GSFYNSYFEV 252 (299)
Q Consensus 238 ~--~~-------~~-----~~f~~~Y~~~ 252 (299)
+ .+ +| ..|++.|.+.
T Consensus 225 ~E~~~~~~~~~~~p~~~~~~~fl~~Y~~~ 253 (330)
T PLN02421 225 NEYAGFDCDYSLYPSKEEQYHFFRHYLRP 253 (330)
T ss_pred HHHcccccCcccCcCHHHHHHHHHHhCCc
Confidence 1 11 22 2689999864
No 31
>TIGR01767 MTRK 5-methylthioribose kinase. This enzyme is involved in the methionine salvage pathway in certain bacteria.
Probab=99.79 E-value=3.8e-18 Score=150.20 Aligned_cols=195 Identities=21% Similarity=0.224 Sum_probs=119.4
Q ss_pred eeCCccccceEEEEeCCc--cEEEEecCCC----------CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEE
Q 022304 29 PVGGGCINLASRYGTDAG--SFFVKTNRSI----------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII 96 (299)
Q Consensus 29 ~~~~G~~n~~y~v~~~~g--~~vlK~~~~~----------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v 96 (299)
.+|+|..|.||||...+| ++|||.+.+. +..+...|++.|+.+++..+-.||++|.++. ....++
T Consensus 2 EigdGnlN~VfrV~~~~g~~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~~~P~~vP~vy~~D~---e~~~~v 78 (370)
T TIGR01767 2 EVGDGNLNLVFHVYDQEGDRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGEHVPHLVPRIFHFDT---EMAVTV 78 (370)
T ss_pred cCCCCceEEEEEEEcCCCCeeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhccCccccCeEEEEcc---ccceeh
Confidence 578999999999998764 8999988531 1355678899998888765556999999984 588899
Q ss_pred EecccCCCC-----------CCcHHHHHHHHHHHHhcCCCCCCCCCCCCCccccccc-CCC----------CCCCHHHHH
Q 022304 97 MEFIEFGSS-----------RGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQ-INK----------WTSNWIEFY 154 (299)
Q Consensus 97 ~e~l~G~~~-----------~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~g~~~~-~~~----------~~~~~~~~~ 154 (299)
||+++.... +..++++|+.||++|-..+. +............. .|. ....+....
T Consensus 79 MEdL~~~~ilR~~Li~g~~~p~~A~~iG~~La~tlf~tsd---~~~~~~~kk~l~~~f~N~eLc~itEdlvft~py~~~~ 155 (370)
T TIGR01767 79 MEDLSHHKIARKGLIEGENYPHLARHIGEFLAKTLFYSSD---YALEPKVKKALVAQFTNPELCDITERLVFTDPYFDHD 155 (370)
T ss_pred HhhCccchHHHHHHHcCCCChHHHHHHHHHHHHHHHhhcc---cccCHHHHHHHHHHhCCHHHHHHHHHhccccchhhhh
Confidence 999976431 24578999999999865531 22111000000000 000 000000000
Q ss_pred HHhhhHHHHHHHHhhc-CChHHHHHHHHHHHHHhccccCCCCCcceeccCCCCCCeeecCCCCeEEEccc-cccCCchhh
Q 022304 155 AEHRLGYQLKLALDQY-GDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA-CYYGHNEAE 232 (299)
Q Consensus 155 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~liHgDl~~~Nvl~~~~~~~~iID~~-~~~g~~~~D 232 (299)
..++.+.++...+.. .++. +...+.+++..+. ....+|||||||++||++++++ +.+|||+ +.+|++.+|
T Consensus 156 -~n~~~p~l~~~~~~l~~d~~----l~~~v~~Lk~~f~--~~~~~llHGDl~~gNi~~~~~~-~~~iD~e~~~~G~~~~D 227 (370)
T TIGR01767 156 -TNDFEEELRPFVAKLRNDDS----LKIEAAKLKHSFL--ASAETLLHGDLHSGSIFVSEHE-TKVIDPEFAFYGPIGFD 227 (370)
T ss_pred -hhcCChhHHHHHHHHhcCHH----HHHHHHHHHHhhc--cCcceeeeccCCcccEEEcCCC-CEEEcCcccccCchHhh
Confidence 001122222111110 1212 1222333443333 2467999999999999997665 7899997 789999999
Q ss_pred hhhhh
Q 022304 233 FGMSW 237 (299)
Q Consensus 233 la~~~ 237 (299)
++.+.
T Consensus 228 lg~~i 232 (370)
T TIGR01767 228 IGQFI 232 (370)
T ss_pred HHHHH
Confidence 99763
No 32
>PTZ00296 choline kinase; Provisional
Probab=99.73 E-value=8.6e-16 Score=140.79 Aligned_cols=187 Identities=10% Similarity=0.027 Sum_probs=117.2
Q ss_pred eeeeeeCCccccceEEEEeCC----------ccEEEEecCCCCcch--HHHHHHHHHHHHhcCCCCCccceeecccCCCc
Q 022304 25 TKICPVGGGCINLASRYGTDA----------GSFFVKTNRSIGPSM--FEGEALGLGAMYETRTIRAPRPFKVGALPTGG 92 (299)
Q Consensus 25 ~~~~~~~~G~~n~~y~v~~~~----------g~~vlK~~~~~~~~~--~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~ 92 (299)
++++++.||.+|.+|+|+..+ .+|++|+++..+... ...|..+++.|+.. + -.|+++... .
T Consensus 108 I~i~~l~gGlTN~~f~v~~~~~~~~~~~~~~~~~lvRiyG~~te~lIdR~~E~~v~~~ls~~-g-i~P~l~~~f-----~ 180 (442)
T PTZ00296 108 VRVNQILSGLTNQLFEVSLKEETANNYPSIRRRVLFRIYGKDVDELYNPISEFEVYKTMSKY-R-IAPQLLNTF-----S 180 (442)
T ss_pred EEEEEecCcccCceEEEEecCCCCccccCcCceEEEEecCCCccceeCHHHHHHHHHHHHHC-C-CCCceEEEe-----C
Confidence 489999999999999998652 379999998754322 35799999999886 3 468888654 2
Q ss_pred eEEEEecccCCCCC-------CcHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCCCCHHHHHHHhhhHHHHHH
Q 022304 93 SYIIMEFIEFGSSR-------GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKL 165 (299)
Q Consensus 93 ~~~v~e~l~G~~~~-------~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (299)
.+.+.+|++|.++. .....+++.|+++|+..... ..+. .. ..+..-|. ++..+...
T Consensus 181 gg~I~efi~g~~l~~~dl~~~~~~~~iA~~L~~lH~~~~~~---~~~~--~f------~~~p~~f~------~i~~~~~~ 243 (442)
T PTZ00296 181 GGRIEEWLYGDPLRIDDLKNPSILIGIANVLGKFHTLSRKR---HLPE--HW------DRTPCIFK------MMEKWKNQ 243 (442)
T ss_pred CCEEEEeeCCccCCHHHcCCHHHHHHHHHHHHHHhcccccc---cCch--hc------cCCCcHHH------HHHHHHHH
Confidence 36789999998653 34689999999999986311 0000 00 00111121 11111111
Q ss_pred HHhhc-CC------hHHHHHHHHHHHHHhc--cccCCCCCcceeccCCCCCCeeecCCCCeEEEccc-cccCCchhhhhh
Q 022304 166 ALDQY-GD------STIYQRGHRLMKNLAP--LFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA-CYYGHNEAEFGM 235 (299)
Q Consensus 166 ~~~~~-~~------~~~~~~~~~~~~~l~~--~l~~~~~~~~liHgDl~~~Nvl~~~~~~~~iID~~-~~~g~~~~Dla~ 235 (299)
+.+.. .. ..+.+.+..+.+.+.. .+.....+.++||+|+.++|||.++++ +.+|||+ +.+.+|++|||.
T Consensus 244 ~~~~~~~~~~~~~~~~l~~e~~~l~~~l~~~~~l~~~~~~~VfCHNDl~~~NiL~~~~~-l~LIDfEYAg~ndpafDIAn 322 (442)
T PTZ00296 244 LSKYKNIEKYQRDIHKYIKESEKFIKFMKVYSKSDNLANDIVFCHNDLQENNIINTNKC-LRLIDFEYSGYNFLATDIAN 322 (442)
T ss_pred HHhhccchHhHhhHHHHHHHHHHHHHHHHhhcccccccCCeeEEeCCCCccceeecCCC-EEEEeecccccccHHHHHHH
Confidence 11100 00 0011122222221110 011223578999999999999987555 8999995 899999999997
Q ss_pred h
Q 022304 236 S 236 (299)
Q Consensus 236 ~ 236 (299)
.
T Consensus 323 ~ 323 (442)
T PTZ00296 323 F 323 (442)
T ss_pred H
Confidence 5
No 33
>COG3231 Aph Aminoglycoside phosphotransferase [Translation, ribosomal structure and biogenesis]
Probab=99.72 E-value=2.9e-16 Score=127.32 Aligned_cols=218 Identities=15% Similarity=0.151 Sum_probs=145.5
Q ss_pred eeeeeCCcccc-ceEEEEeCCc-cEEEEecCCCCcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEecccCC
Q 022304 26 KICPVGGGCIN-LASRYGTDAG-SFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFG 103 (299)
Q Consensus 26 ~~~~~~~G~~n-~~y~v~~~~g-~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~ 103 (299)
.++++..|.+. .|||+..+.+ .+++|+........+..|++.++|++.. ++++|+|+..... .++.|++|+.++|.
T Consensus 22 ~w~~v~~geS~~~v~rl~a~~r~g~~~k~~~~~~~a~L~~Ea~RlrWla~~-~l~~P~V~~~~~~-~~~~wLl~salpG~ 99 (266)
T COG3231 22 RWRRVTEGESGAGVFRLFADSRPGLYLKIASSGPAAELEGEAARLRWLAGQ-GLGCPRVLGLEDD-ADQAWLLMSALPGE 99 (266)
T ss_pred ccceeeccCCCCeEEEEeccCCCceEEEEecCcchhhhhhHHHHHHHhccc-CCCCCceEeeccC-cchhHHhhhhcCCC
Confidence 45677777654 7999987655 7899998875556789999999999987 6999999988764 67999999999998
Q ss_pred CCC---------CcHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCCCCHHHHHHHhhhHHHHHH-H-HhhcCC
Q 022304 104 SSR---------GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKL-A-LDQYGD 172 (299)
Q Consensus 104 ~~~---------~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~ 172 (299)
+.. ..+..+++.|+.||..+...+.|+.... ..+.. .....+. . .+...+
T Consensus 100 ~~s~~~~~~~p~r~v~~la~aLR~LH~l~~~aCPFd~rl~-----------------~rl~~--a~~r~~a~~vdesdfd 160 (266)
T COG3231 100 DASHPRYALDPKRAVPLLAEALRRLHELPVEACPFDRRLA-----------------RRLAK--ARARVRAGLVDESDFD 160 (266)
T ss_pred cccchhhcCCHHHHHHHHHHHHHHHhcCChhhCCcchHHH-----------------HHHHH--HHHHHhccCCChhhcC
Confidence 752 2357899999999998764443432100 00000 0000000 0 000000
Q ss_pred hH-HHHHHHHHHHHHhccccCCCCCcceeccCCCCCCeeecCCCCeEEEccc-cccCCchhhhhhh-hh-------cCCC
Q 022304 173 ST-IYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA-CYYGHNEAEFGMS-WC-------AGFG 242 (299)
Q Consensus 173 ~~-~~~~~~~~~~~l~~~l~~~~~~~~liHgDl~~~Nvl~~~~~~~~iID~~-~~~g~~~~Dla~~-~~-------~~~~ 242 (299)
.+ .-....++++.+...... ....++||||...-|+|+++++-.++||.. ..+||+..||+.. +. ..+.
T Consensus 161 ~e~qgr~~~El~d~L~~~rp~-~edLVv~HGDACLPN~i~d~~rf~GfIDlGrlGVaDRh~DLala~~s~~~nl~g~~~~ 239 (266)
T COG3231 161 EERQGRTAEELFDELEARRPA-VEDLVVTHGDACLPNFILDGWRFSGFIDLGRLGVADRHQDLALATWSLRFNLGGDVWD 239 (266)
T ss_pred hhhcCCCHHHHHHHHHhcCCc-hhhceeecCcccCcceEecCCceEEeeecCcccchHHHHhHHHHHHHHHhccCcchhh
Confidence 00 011223344444333222 356799999999999999988778999985 5799999999965 21 1255
Q ss_pred hhhHHHhhhhCCCCCCHHHHHHHHHHH
Q 022304 243 GSFYNSYFEVMPKQPGFEKRRDLYMLY 269 (299)
Q Consensus 243 ~~f~~~Y~~~~~l~~~~~~r~~~~~l~ 269 (299)
+.|++.|+-..+ + ..|+.+|++.
T Consensus 240 ~~fl~~Yg~~~~--d--~~rl~~yr~l 262 (266)
T COG3231 240 DPFLDAYGRGAI--D--PARLAYYRLL 262 (266)
T ss_pred HHHHHHhCcCCC--C--HHHHHHHHHH
Confidence 789999994321 2 4788888653
No 34
>PTZ00384 choline kinase; Provisional
Probab=99.67 E-value=1.3e-14 Score=130.76 Aligned_cols=207 Identities=13% Similarity=0.062 Sum_probs=123.1
Q ss_pred cchHHHHHHhcCCC-----cceeeeeeeCCccccceEEEEeCCc---c-----EEEEecCCCCc--chHHHHHHHHHHHH
Q 022304 8 DDPIREWILSEGKA-----THITKICPVGGGCINLASRYGTDAG---S-----FFVKTNRSIGP--SMFEGEALGLGAMY 72 (299)
Q Consensus 8 ~~~i~~~l~~~~~~-----~~~~~~~~~~~G~~n~~y~v~~~~g---~-----~vlK~~~~~~~--~~~~~E~~~l~~L~ 72 (299)
...+.+++.+.-++ ....+++++.||.+|.+|+|+..++ . +++|++..... -.-+.|..+++.|+
T Consensus 31 ~~~~~~~~~~~~p~w~~~~~~~i~i~~l~gGLTN~l~~v~~~~~~~~~~~~k~Vl~R~~g~~~~l~IdR~~E~~i~~~Ls 110 (383)
T PTZ00384 31 HSNLKSLCIRHVPFWNNVNPEFIEIKKMNNGITNQVYQATLVDGDKDRYPIKSVCIKKSSTYNSLVIDNDLQYNIAKLLG 110 (383)
T ss_pred HHHHHHHHHHHCCccccCCcccEEEEEeCCcccceEEEEEecCCCCCccccceEEEEeccCCCceEeccHHHHHHHHHHH
Confidence 34566666665222 2346789999999999999986543 3 45566544322 11257999999998
Q ss_pred hcCCCCCccceeecccCCCceEEEEecccCCCCC-------CcHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCC
Q 022304 73 ETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSR-------GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINK 145 (299)
Q Consensus 73 ~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~~~~-------~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~g~~~~~~~ 145 (299)
.+ --.|+++.... .+++.+|++|+++. .....+++.|+++|+.... +. + . ..+.
T Consensus 111 ~~--glgP~l~~~f~-----~g~l~efIeGr~l~~~dl~~p~~~~~IA~~La~lH~~~~~---~~-p-~-~~~~------ 171 (383)
T PTZ00384 111 DN--NFGPKIIGRFG-----DFTIQEWVEGNTMGIDSLQNLSVLTGIASSLAKFHKRVTE---LV-P-K-EWDR------ 171 (383)
T ss_pred hC--CCCCeEEEecC-----CEEEEEEeccccCChhHhcCHHHHHHHHHHHHHHhccccc---CC-C-c-cccC------
Confidence 86 35799998864 37999999998763 2367999999999997632 10 0 0 0001
Q ss_pred CCCCHHHH--HHHhhhHHHHHHHHhhcCC-hHHHHHHHHHHHHHhccccC---CCCCcceeccCCCCCCeeecCCCCeEE
Q 022304 146 WTSNWIEF--YAEHRLGYQLKLALDQYGD-STIYQRGHRLMKNLAPLFEG---VNVEPCLLHGDLWSGNISSDKNGEPVI 219 (299)
Q Consensus 146 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~---~~~~~~liHgDl~~~Nvl~~~~~~~~i 219 (299)
+...|... +.. .+....... ....+ ..+.+.+..+...+...+.. ...+.++||.|++++|||.++++ +.+
T Consensus 172 ~p~~~~~i~~w~~-~~~~~~~~~-~~~~~~~~l~~~~~~~~~~L~~~l~~~~~~~~~~VfCHNDL~~gNIL~~~~~-l~l 248 (383)
T PTZ00384 172 TPMFLTKISTWSQ-HVERIIKKY-NLDFDYNELVQNYELFKKILNNHLNTSNSITNSVLFCHNDLFFTNILDFNQG-IYF 248 (383)
T ss_pred cchHHHHHHHHHH-HHHHHHHhh-ccccCHHHHHHHHHHHHHHHHHhhccccccccceeeeeccCCcccEEecCCC-EEE
Confidence 11111110 000 001000000 00011 11222233332222222211 12467999999999999986554 899
Q ss_pred Eccc-cccCCchhhhhhh
Q 022304 220 LDPA-CYYGHNEAEFGMS 236 (299)
Q Consensus 220 ID~~-~~~g~~~~Dla~~ 236 (299)
|||+ +.+++|++|||..
T Consensus 249 ID~EYA~~n~~~fDLAn~ 266 (383)
T PTZ00384 249 IDFDFAGFNYVGWEIANF 266 (383)
T ss_pred EEeccccCCchHhHHHHH
Confidence 9995 8999999999965
No 35
>TIGR02905 spore_yutH spore coat protein YutH. Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YutH, are found only in the family Bacillaceae from among the endospore-forming members of the Firmicutes branch of the Bacteria.
Probab=99.62 E-value=8.6e-14 Score=122.96 Aligned_cols=221 Identities=14% Similarity=0.164 Sum_probs=139.7
Q ss_pred hcCCCcceeeeeeeCCccccceEEEEeCCccEEEEecCCCCcchHHHHHHHHHHHHhcCCCC-CccceeecccC-----C
Q 022304 17 SEGKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIR-APRPFKVGALP-----T 90 (299)
Q Consensus 17 ~~~~~~~~~~~~~~~~G~~n~~y~v~~~~g~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~~~-vP~~~~~~~~~-----~ 90 (299)
++ +|..+.++++. | .+..|.|++|.|+||.....+...+.....++++|+++ |++ ||+++.+.++. .
T Consensus 6 ~~-Y~l~~~~~~~~--g---~~~~~~t~~g~y~Lk~~e~~~~~~l~f~~~~~~~L~~~-G~~~v~~~i~tk~G~~~~~~~ 78 (313)
T TIGR02905 6 DQ-FGLYCDERFRV--G---RYEAFRANNQAYLIVPVDGLEEEELAELMAMSDYLQQA-GDETVLELVKTKFGQSSALID 78 (313)
T ss_pred Hh-hCcCcccceec--C---ceeeEEeCCceEEEEEecCCCHHHHHHHHHHHHHHHHc-CCCcccceeecCCCCEeEEEC
Confidence 44 57778888886 3 25667999999999998544445577888899999987 676 99999876553 5
Q ss_pred CceEEEEecccCCCCCCcHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCCCCHHHHHHH--hhhHHHHHHHHh
Q 022304 91 GGSYIIMEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAE--HRLGYQLKLALD 168 (299)
Q Consensus 91 ~~~~~v~e~l~G~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 168 (299)
|.++++++|++|..... ..+|+.||+||..+.. |..+... ...| ..|.+.+.. .+++........
T Consensus 79 g~~y~L~~w~~~~~~~~--~~~~~~LA~lH~as~~---f~~~~~~-------~~~~-~~~~~~~~k~~~el~~~~~~~~~ 145 (313)
T TIGR02905 79 GVSYYLFKAPEFNERRG--VDLGRELATFHKRGRQ---YPRPIWK-------KSRI-GQWKELWAKRLDQLEDWWQSLLA 145 (313)
T ss_pred CEEEEEEeCCCcccchh--HHHHHHHHHHHHhcCC---CCCCccc-------cccc-cccHHHHHHHHHHHHHHHHHHHh
Confidence 89999999987765322 3999999999999973 3221111 1112 334444432 112222111111
Q ss_pred hc-CCh----------HHHHHHHHHHHHHhc-ccc---CCCCCcceeccCCCCCCeeecCCCCeEEEccccccCCchhhh
Q 022304 169 QY-GDS----------TIYQRGHRLMKNLAP-LFE---GVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEF 233 (299)
Q Consensus 169 ~~-~~~----------~~~~~~~~~~~~l~~-~l~---~~~~~~~liHgDl~~~Nvl~~~~~~~~iID~~~~~g~~~~Dl 233 (299)
.. .++ ......++.++.+.. -.. ......++||||+...|++ +++ ..++|+++.+++.|..||
T Consensus 146 ~~~~s~Fd~~fl~~~d~~~~~a~~ai~~l~~s~y~~~~~~~~~~~lCH~d~~~hn~l-~~~-~~~~i~~d~~~D~~~~DL 223 (313)
T TIGR02905 146 QGPQTLFDEQFLETFPYYLGLTENAIQYAADTELDDEPGLADSGTICHERFGETTWL-ERG-GLIKPPTEWVYDHPARDL 223 (313)
T ss_pred cCCCChHHHHHHHHhHHHHHHHHHHHHHHHHccchhhhhccccCccccCccCccccc-cCC-CeEecccccccccchhHH
Confidence 10 000 011222223332221 011 1124569999999999988 444 478888877799999999
Q ss_pred hhhh---h-c----CCC--hhhHHHhhhhCCCCCCH
Q 022304 234 GMSW---C-A----GFG--GSFYNSYFEVMPKQPGF 259 (299)
Q Consensus 234 a~~~---~-~----~~~--~~f~~~Y~~~~~l~~~~ 259 (299)
+.+. + . .++ ..++++|+++.|++++.
T Consensus 224 ~~firk~~~k~~~~~~~~~~~~l~~Y~~~~pL~~~e 259 (313)
T TIGR02905 224 AEWIRERYMGEIRQNQRAIASFLQEYEQAAPLTPFS 259 (313)
T ss_pred HHHHHHHHHHhccccHHHHHHHHHHhhhcCCCCHHH
Confidence 9652 2 1 122 47899999999998743
No 36
>PRK10271 thiK thiamine kinase; Provisional
Probab=99.60 E-value=2.9e-14 Score=114.89 Aligned_cols=171 Identities=14% Similarity=0.191 Sum_probs=105.2
Q ss_pred EEEecccCCCCC--CcHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCCCCHHHHHHHhhhHHHHHHHHhhcCC
Q 022304 95 IIMEFIEFGSSR--GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGD 172 (299)
Q Consensus 95 ~v~e~l~G~~~~--~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (299)
++.+|++|...+ ....+++..++++|+.+. ++.+. +.. .++..+.........+
T Consensus 1 llv~Wl~Ge~~~~~~~~~~La~~l~~LH~~p~----~~~~~---------------~l~-----~~i~~Yw~~l~~~~~~ 56 (188)
T PRK10271 1 MAVDYLPGEVKSYLPDTNELAGLLYHLHQQPR----FGWRI---------------TLL-----PLLEQYWQQSDPARRT 56 (188)
T ss_pred CcccccCCCcCCCccCHHHHHHHHHHHhcCCC----CCCCC---------------CHH-----HHHHHHHHHhccccCC
Confidence 467999998774 357899999999999774 33211 111 1233333333222222
Q ss_pred hHHHHHHHHHHHHHhccccCCCCCcceeccCCCCCCeeecCCCCeEEEccc-cccCCchhhhhhhhhcC--CChhhHHHh
Q 022304 173 STIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA-CYYGHNEAEFGMSWCAG--FGGSFYNSY 249 (299)
Q Consensus 173 ~~~~~~~~~~~~~l~~~l~~~~~~~~liHgDl~~~Nvl~~~~~~~~iID~~-~~~g~~~~Dla~~~~~~--~~~~f~~~Y 249 (299)
+... +....+.......+.+.++||||+||+|+++++++ ..+|||+ +..|||.+|++.++... -.+.|++.|
T Consensus 57 ~~wl----~~~~~~~~~~~~~~l~~~p~H~D~~~~N~~~~~~~-~~lIDwe~a~~gDp~~DLa~~~~~~~~~~~~~l~~Y 131 (188)
T PRK10271 57 PFWL----RMLKRLRKAGEPRPLRLAPLHMDVHAGNLVHSASG-LRLIDWEYAGDGDIALELAAVWVENTEQHRQLVNDY 131 (188)
T ss_pred HHHH----HHHHHHHhcccCCCCCeeeecCCCCCccEEEECCC-EEEEeCCcccCCCHHHHHHHHHcCCHHHHHHHHHHH
Confidence 2222 23333333333224678999999999999998777 8899995 78999999999875321 124799999
Q ss_pred hhhCCCCCC-HHHHHHHHHHHHHHH-------HHHhhC-cccHHHHHHHHHHHH
Q 022304 250 FEVMPKQPG-FEKRRDLYMLYHYLN-------HYNLFG-SGYRSSALSIIDDYL 294 (299)
Q Consensus 250 ~~~~~l~~~-~~~r~~~~~l~~~l~-------~~~~~~-~~~~~~~~~~~~~~~ 294 (299)
....-.+.. +..|+.-+..+.... ++...| ..|...+.++.+++-
T Consensus 132 ~~~~~~d~~~~~~~~~~W~p~~~~m~llWyev~~qq~~d~~fl~~a~~~~~~~~ 185 (188)
T PRK10271 132 ATRAKIDAAQLWRQVRRWFPWVLMLKAGWFEYRWRQTGDQQFIRLADDTWRQLL 185 (188)
T ss_pred hCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHhhh
Confidence 954334443 455555554433322 233333 467777777777653
No 37
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.59 E-value=3.5e-14 Score=111.13 Aligned_cols=145 Identities=26% Similarity=0.270 Sum_probs=103.8
Q ss_pred eeeeCCccccceEEEEeCCccEEEEecCCCC-cchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEecccCCCC
Q 022304 27 ICPVGGGCINLASRYGTDAGSFFVKTNRSIG-PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSS 105 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~~~g~~vlK~~~~~~-~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~~~ 105 (299)
+++++.|..+.+|+++..++.+++|...... ...+..|...++.|+.. +.++|+++..... .+..+++++|++|..+
T Consensus 3 ~~~i~~g~~~~v~~~~~~~~~~~iK~~~~~~~~~~~~~e~~~~~~l~~~-~~~~p~~~~~~~~-~~~~~~v~e~~~g~~~ 80 (155)
T cd05120 3 IKLLKGGLTNRVYLLGTKDEDYVLKINPSREKGADREREVAILQLLARK-GLPVPKVLASGES-DGWSYLLMEWIEGETL 80 (155)
T ss_pred ceecccccccceEEEEecCCeEEEEecCCCCchhHHHHHHHHHHHHHHc-CCCCCeEEEEcCC-CCccEEEEEecCCeec
Confidence 4678889999999999988899999987532 24578999999999876 6789999887654 4689999999998755
Q ss_pred CCcHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCCCCHHHHHHHhhhHHHHHHHHhhcCChHHHHHHHHHHHH
Q 022304 106 RGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKN 185 (299)
Q Consensus 106 ~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (299)
... .. ..+. .....+.+.
T Consensus 81 ~~~--------------~~-----------------------~~~~-------------------------~~~~~~~~~ 98 (155)
T cd05120 81 DEV--------------SE-----------------------EEKE-------------------------DIAEQLAEL 98 (155)
T ss_pred ccC--------------CH-----------------------HHHH-------------------------HHHHHHHHH
Confidence 211 00 0000 000111111
Q ss_pred HhccccCCCCCcceeccCCCCCCeeecCCCCeEEEccc-cccCCchhhhhhhh
Q 022304 186 LAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA-CYYGHNEAEFGMSW 237 (299)
Q Consensus 186 l~~~l~~~~~~~~liHgDl~~~Nvl~~~~~~~~iID~~-~~~g~~~~Dla~~~ 237 (299)
+..+.. ....+++|||++++||++++++...++||+ +.++++.+|++.+.
T Consensus 99 l~~lh~--~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~~~~~~d~~~~~ 149 (155)
T cd05120 99 LAKLHQ--LPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGYGPPAFDLAAAL 149 (155)
T ss_pred HHHHhC--CCceEEEecCCCcceEEEECCcEEEEEecccccCCChHHHHHHHH
Confidence 121211 123689999999999999886678999995 67999999999763
No 38
>PF07914 DUF1679: Protein of unknown function (DUF1679); InterPro: IPR012877 This region is found in a number of Caenorhabditis elegans and Caenorhabditis briggsae proteins, in one case (Q19034 from SWISSPROT) as a repeat. In many of the family members, this region is associated with the CHK region described by SMART as being found in zinc finger-C4 and HLH domain-containing kinases. In fact, one member of this family (Q9GUC1 from SWISSPROT) is annotated as being a member of the nuclear hormone receptor family, and contains regions typical of such proteins (IPR000536 from INTERPRO, IPR008946 from INTERPRO, and IPR001628 from INTERPRO).
Probab=99.59 E-value=5.2e-14 Score=127.97 Aligned_cols=220 Identities=19% Similarity=0.250 Sum_probs=130.2
Q ss_pred CCcchHHHHHHhcCCCc-----ceeeeeeeC--CccccceEEEEeC-----Cc-----cEEEEecCCC---------C--
Q 022304 6 LSDDPIREWILSEGKAT-----HITKICPVG--GGCINLASRYGTD-----AG-----SFFVKTNRSI---------G-- 57 (299)
Q Consensus 6 ~~~~~i~~~l~~~~~~~-----~~~~~~~~~--~G~~n~~y~v~~~-----~g-----~~vlK~~~~~---------~-- 57 (299)
.+++++.+-|++. +++ +-.+++.|| .|++|.+.+|+.+ ++ +|||||+..- .
T Consensus 13 vtw~dve~~l~~~-l~t~a~~g~~~~~~~Igdg~GFmS~I~lV~~dW~~~~~~~~LP~k~vlKI~S~~~~~~~~~~~~~~ 91 (414)
T PF07914_consen 13 VTWEDVEEALQEA-LGTKAKFGENKKATNIGDGKGFMSRIALVEPDWTGEEEDENLPKKFVLKIPSQLALRALSENMKFE 91 (414)
T ss_pred eeHHHHHHHHHHH-hCCCcCcCCCcceeeccCCcchheeEEEEEeeeccCccccCCCceEEEEeccHhhHHHHHHhhccc
Confidence 4678888888877 322 234566665 5678999999852 11 7999998520 0
Q ss_pred ------c------------chHHHHHHHHHHHHhc--CCCCCccceeecccC---CCceEEEEecccCCCC-------C-
Q 022304 58 ------P------------SMFEGEALGLGAMYET--RTIRAPRPFKVGALP---TGGSYIIMEFIEFGSS-------R- 106 (299)
Q Consensus 58 ------~------------~~~~~E~~~l~~L~~~--~~~~vP~~~~~~~~~---~~~~~~v~e~l~G~~~-------~- 106 (299)
. ..-.+|..+++.+... .++|+|++|...... .-.++++|||+++... +
T Consensus 92 ~~~~~~~e~~~~~~~~~l~~~HNrEv~~Y~~~~k~~~~~l~~PKvY~~k~f~~en~~kG~IimE~ven~~~~~~~e~~~~ 171 (414)
T PF07914_consen 92 GGKGFDEEKEWEEFEKFLREMHNREVNFYKIFEKFNHPNLPYPKVYFGKKFDEENKLKGFIIMEYVENVHSMDMYENLSV 171 (414)
T ss_pred cccccchhhHHHHHHHHHHHhhHHHHHHHHHHHhcCCCCCCCCceeEEEecCCCCCCCCEEEEeccCCceeecccCCCCH
Confidence 0 1124788888888765 478999999876543 2368999999998642 1
Q ss_pred CcHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCC-CCCHHHHHHHhhhHHHHHHHHhhcCChHHHHHHHHHHHH
Q 022304 107 GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKW-TSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKN 185 (299)
Q Consensus 107 ~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (299)
.+..++.+.||++|+.+...+.-.+ ....| ..+ ...+..++....+............. ...+.+.+.++.
T Consensus 172 eql~~iv~aLA~~~A~sl~ls~ee~--~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~e~~~~~i~~ 243 (414)
T PF07914_consen 172 EQLLQIVRALAKFHALSLKLSEEEK--KSISG-----PDFLEEMFGEFFSEEGMKKIFENLRKIFGF-FSPEKLEELIEK 243 (414)
T ss_pred HHHHHHHHHHHHHHHhHccCCHHHh--hhccC-----chHHHHHHHHHhchHHHHHHHHHHHhhccc-cChHHHHHHHHH
Confidence 5678999999999999864110000 00000 000 00011121111111111111111100 001111222221
Q ss_pred H----------------hccccCCCCCcceeccCCCCCCeeecCCCC-----eEEEccc-cccCCchhhhhhhh
Q 022304 186 L----------------APLFEGVNVEPCLLHGDLWSGNISSDKNGE-----PVILDPA-CYYGHNEAEFGMSW 237 (299)
Q Consensus 186 l----------------~~~l~~~~~~~~liHgDl~~~Nvl~~~~~~-----~~iID~~-~~~g~~~~Dla~~~ 237 (299)
+ .+.+ ..+++|||||+|..||||++++. .+||||. ...|.|+.|++.+.
T Consensus 244 ~~~~~~~~~~~~~~~~i~~~l---G~~~VL~HGDLw~~NiLw~k~~~g~~~l~AIIDwQ~vh~G~~~eDl~Rll 314 (414)
T PF07914_consen 244 FEHYLPDIKNFEKASNINKQL---GIKPVLVHGDLWSSNILWDKDSDGKLKLKAIIDWQCVHRGSPAEDLARLL 314 (414)
T ss_pred HHHhcccHHhHHHHhhhHHhc---CCCcceecCCccHHheeeecCCchhHHHHHHHHHHHhhcCchHHHHHHHH
Confidence 1 2222 35899999999999999987543 3799996 57999999999764
No 39
>PF04655 APH_6_hur: Aminoglycoside/hydroxyurea antibiotic resistance kinase; InterPro: IPR006748 The aminoglycosides are a large group of biologically active bacterial secondary metabolites, best known for their antibiotic properties []. Aminoglycoside phosphotransferases achieve inactivation of these enzymes by phosphorylation, utilising ATP. Likewise, hydroxyurea is inactivated by phosphorylation of the hydroxy group in the hydroxylamine moiety.; GO: 0016773 phosphotransferase activity, alcohol group as acceptor, 0006468 protein phosphorylation, 0019748 secondary metabolic process
Probab=99.58 E-value=1.4e-13 Score=116.91 Aligned_cols=211 Identities=16% Similarity=0.124 Sum_probs=127.5
Q ss_pred eeeCCccccceEEEEeCCc-cEEEEecCCCCcchHHHHH---HHHHHHHhcCCCCCccceeecccCCCceEEEEecccC-
Q 022304 28 CPVGGGCINLASRYGTDAG-SFFVKTNRSIGPSMFEGEA---LGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEF- 102 (299)
Q Consensus 28 ~~~~~G~~n~~y~v~~~~g-~~vlK~~~~~~~~~~~~E~---~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G- 102 (299)
.++.+|.++.|+.|.+.+| +.|||+..+... ...|. ..|++... --+.+++..+. ....+++|++.+
T Consensus 8 ~~~~~g~~s~V~pv~~~dG~~avLKl~~p~~~--~~~E~~g~~~L~~w~G---~GaVrll~~d~---~~~AlLLErl~~g 79 (253)
T PF04655_consen 8 GPPAHGSSSLVVPVRRADGTPAVLKLAPPHAE--AEHEARGEAALRWWNG---RGAVRLLAADP---ERGALLLERLDPG 79 (253)
T ss_pred CCCCCCcceEEEEEEcCCCCeEEEEecCCccc--chhhhhHHhHhheeCC---CCceeeecccc---ccchhhhhhccCC
Confidence 3456788899999999887 899999986322 33444 44666654 34568998873 578999999954
Q ss_pred CCCC---------CcHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCCCCHHHHHHHhhhHHHHHHHHhhcCCh
Q 022304 103 GSSR---------GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDS 173 (299)
Q Consensus 103 ~~~~---------~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (299)
.++. .....++..+++||.....+...+++ . ..+|...+.. ........ .+.
T Consensus 80 ~~L~~~~~~g~d~~a~~i~a~l~~~L~~~~~~~~p~~l~---------~----l~~~~~~l~~-----~~~~~~~~-~~~ 140 (253)
T PF04655_consen 80 RSLASLPREGDDDEATRIAAGLLRRLHRPAPEPLPSGLP---------P----LADWFARLFA-----RARERAGA-PPR 140 (253)
T ss_pred CchhhcccccCchHHHHHHHHHHHHHhCCCCCCCCccch---------h----HHHHHHHHHH-----HhHhhhcc-ccH
Confidence 4442 12578899999999876421000110 0 1123222211 11110000 111
Q ss_pred HHHHHHHHHHHHHhccccCCCCCcceeccCCCCCCeeecCCCCeEEEccccccCCchhhhhhhhhc---CC----C----
Q 022304 174 TIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFGMSWCA---GF----G---- 242 (299)
Q Consensus 174 ~~~~~~~~~~~~l~~~l~~~~~~~~liHgDl~~~Nvl~~~~~~~~iID~~~~~g~~~~Dla~~~~~---~~----~---- 242 (299)
..+++..+...+++.. +.+.+++|||+|++|||-...+.-..||+..+.|+|+||++.+... .. .
T Consensus 141 ---~l~~~a~~~~~~Ll~~-~~~~~lLHGDLH~~NIL~~~~~~WlaIDPkgl~Gdp~yd~a~~l~n~~~~~~~~~~~~~i 216 (253)
T PF04655_consen 141 ---RLVDAAAALARELLAS-PGEEVLLHGDLHHGNILAAGRRGWLAIDPKGLVGDPAYDLAPLLRNPLDELPDADDPERI 216 (253)
T ss_pred ---HHHHHHHHHHHHHhcC-CCcceeeccccchHhhhccCCCCceEeCCcccccccccCHHHHHhCccccccccccHHHH
Confidence 2223333323344443 4567999999999999986644356899999999999999976431 11 1
Q ss_pred hhhHHHhhhhCCCCCCHHHHHHHHHHHHHH
Q 022304 243 GSFYNSYFEVMPKQPGFEKRRDLYMLYHYL 272 (299)
Q Consensus 243 ~~f~~~Y~~~~~l~~~~~~r~~~~~l~~~l 272 (299)
...++...+..+++ .+|+.-+.+.+.+
T Consensus 217 ~~r~~~la~~~gld---~~R~~~W~~~~~v 243 (253)
T PF04655_consen 217 RRRAALLAEAAGLD---RERILAWAFARAV 243 (253)
T ss_pred HHHHHHHHHHHCcC---HHHHHHHHHHHHH
Confidence 13355555666666 3677666665554
No 40
>PF02958 EcKinase: Ecdysteroid kinase; InterPro: IPR004119 This family includes proteins of unknown function. All known members of this group are proteins from drosophila and Caenorhabditis elegans.
Probab=99.53 E-value=1.3e-13 Score=121.01 Aligned_cols=217 Identities=17% Similarity=0.226 Sum_probs=121.3
Q ss_pred CCccccceEEEEeCC-----c-----cEEEEecCCC--------CcchHHHHHHHHHHHHhcC----------CCCCccc
Q 022304 31 GGGCINLASRYGTDA-----G-----SFFVKTNRSI--------GPSMFEGEALGLGAMYETR----------TIRAPRP 82 (299)
Q Consensus 31 ~~G~~n~~y~v~~~~-----g-----~~vlK~~~~~--------~~~~~~~E~~~l~~L~~~~----------~~~vP~~ 82 (299)
|.|+.+.+|||+... + ++|+|..+.. ....+++|+.+++.+.... ...+|+.
T Consensus 2 Gd~y~s~~~rv~v~~~~~~~~~~~~~s~ivK~~p~~~~~~~~~~~~~~f~~E~~fY~~~~p~l~~~~~~~~~~~~~~P~~ 81 (294)
T PF02958_consen 2 GDNYLSDMYRVTVTYELKGDGKNEPLSLIVKSPPTNPSRREFLREMGSFRREIFFYRELLPELEELQKEAGDPFKFFPKC 81 (294)
T ss_pred CCcceeEEEEEEEEEEEccCCCceEEEEEEEeCCCchhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhccccceeeceE
Confidence 567888899977521 1 7999998731 1256789999888665321 1236888
Q ss_pred eeecccCCCceEEEEecccCCCC---------C-CcHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccc---cCCCCC--
Q 022304 83 FKVGALPTGGSYIIMEFIEFGSS---------R-GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTP---QINKWT-- 147 (299)
Q Consensus 83 ~~~~~~~~~~~~~v~e~l~G~~~---------~-~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~g~~~---~~~~~~-- 147 (299)
+..... .+..++|||.+..... + +.+..+.+.||++|+.+.....- .+....... ......
T Consensus 82 ~~~~~~-~~~~~lvlEDL~~~g~~~~~~~~~l~~~~~~~~l~~LA~fHA~s~~~~~~---~~~~~~~~~~~~~~~~~~~~ 157 (294)
T PF02958_consen 82 YYADED-PGDEVLVLEDLSEKGYRMGDRRDGLDLEHAELVLKKLAKFHAASWALEEK---DPELFEELSSGLFEEPFFRE 157 (294)
T ss_pred EEeccC-CCceeeehhhhhhcCCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHh---Cchhhhhccccceeccchhh
Confidence 887643 3468999999864321 1 35788999999999998631100 000000000 000000
Q ss_pred --CCHHHHHHHhhhHHHHHHHHhhcCC-----hHHHHHHHHHHHHHhccccC-CCCCcceeccCCCCCCeeecCCC----
Q 022304 148 --SNWIEFYAEHRLGYQLKLALDQYGD-----STIYQRGHRLMKNLAPLFEG-VNVEPCLLHGDLWSGNISSDKNG---- 215 (299)
Q Consensus 148 --~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~l~~-~~~~~~liHgDl~~~Nvl~~~~~---- 215 (299)
..|..-+....+....+........ ..+......+.+.+..+... .....+|||||+|.+|||+..++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~vl~HGD~w~nNilf~~~~~g~~ 237 (294)
T PF02958_consen 158 ELEEWFEEFFEQGLKAFIESLDDEWPEYEEYSEKLEALLDKFFERMQELVDPSKEPFNVLCHGDFWTNNILFKYDDDGKP 237 (294)
T ss_pred hhhHHHHHHHHHHHHHHHHHHhhccchhhhhhHHHHHHHHHHHHHHHHHhccccCCceEEEcCccCHHhEeEcccccccc
Confidence 0111111111111111111111000 11122223344444444422 13577999999999999996542
Q ss_pred -CeEEEccc-cccCCchhhhhhhhhcCCC--------hhhHHHhhh
Q 022304 216 -EPVILDPA-CYYGHNEAEFGMSWCAGFG--------GSFYNSYFE 251 (299)
Q Consensus 216 -~~~iID~~-~~~g~~~~Dla~~~~~~~~--------~~f~~~Y~~ 251 (299)
.+.+|||. +.+|.|+.||+.+.+.+.+ +.+++.|.+
T Consensus 238 ~~~~liDfQ~~~~g~p~~Dl~~fl~~s~~~~~r~~~~~~ll~~Y~~ 283 (294)
T PF02958_consen 238 IDVVLIDFQLARYGSPAIDLAYFLYTSLDPELRREHEDELLRHYHE 283 (294)
T ss_pred ccceeeccccccCCCcHhHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Confidence 35899996 6799999999987543333 345666664
No 41
>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2.7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....
Probab=99.47 E-value=9.4e-14 Score=115.98 Aligned_cols=170 Identities=19% Similarity=0.179 Sum_probs=92.7
Q ss_pred ccEEEEecCCCCcch--HHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEecccCCCCC-------CcHHHHHHHH
Q 022304 46 GSFFVKTNRSIGPSM--FEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSR-------GNQSVFGKKL 116 (299)
Q Consensus 46 g~~vlK~~~~~~~~~--~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~~~~-------~~~~~lg~~L 116 (299)
.+|++|+++..+... .+.|..+++.++.. --.|+++..... ..+.+|++|.++. .....+++.|
T Consensus 3 ~~~~~Ri~g~~t~~~idr~~E~~~~~~l~~~--g~~p~~~~~~~~-----g~v~e~i~g~~l~~~~~~~~~~~~~iA~~l 75 (211)
T PF01633_consen 3 EKYLVRIPGEGTENFIDRENENEALKLLSEA--GLGPKIIYFFEN-----GRVEEFIEGRTLSPEDFRNPEILKRIAKLL 75 (211)
T ss_dssp SEEEEEEEESCGCSHHHHHHHHHHHHHHHHT--TSSS-EEEEETT-----EEEEE--SSEE--CGGGGSHHHHHHHHHHH
T ss_pred CEEEEEeCCCCcccccCHHHHHHHHHHHHHc--CCCCeEEEEcCC-----CcEEEEecccccChhhccChHHHHHHHHHH
Confidence 479999998753323 35788889999875 367889988643 4677999998763 2368999999
Q ss_pred HHHHhcCCCCCCCCCCCCCcccccccCCCCCCCHHHHHHH-hhhHHHHHHHHhhc-CChHHHHHHHHHHHHHhccccCCC
Q 022304 117 AEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAE-HRLGYQLKLALDQY-GDSTIYQRGHRLMKNLAPLFEGVN 194 (299)
Q Consensus 117 a~lH~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~ 194 (299)
++||+...+. .. . ....| ..+..+... .... ........ ........+...+..+...+....
T Consensus 76 ~~lH~~~~~~--~~--~--------~~~~~-~~i~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~ 140 (211)
T PF01633_consen 76 AKLHSIPISP--NS--K--------KPDLW-DRIDKYMNKKSEFL--FKRKKKKKSIDKEDLEDLQEELEELEKLLEKSN 140 (211)
T ss_dssp HHHHTHHHTT--SS--S--------S-HHH-HHHHHHHHHHHTCC--CCHHTTTCHHHHHHHHHHHHHHHHHHHHHHTSC
T ss_pred HHHhhccccc--cc--C--------cchHH-HHhhhhccchhhhh--hhhhhhccccccCCHHHHHHHHhhhhhhhhccC
Confidence 9999988611 00 0 00000 001111000 0000 00000000 000111223333344444443334
Q ss_pred CCcceeccCCCCCCeee-cCCCCeEEEccc-cccCCchhhhhhhh
Q 022304 195 VEPCLLHGDLWSGNISS-DKNGEPVILDPA-CYYGHNEAEFGMSW 237 (299)
Q Consensus 195 ~~~~liHgDl~~~Nvl~-~~~~~~~iID~~-~~~g~~~~Dla~~~ 237 (299)
.+.++||+|++++|||+ +.++...+|||+ +.++++.+|||.+.
T Consensus 141 ~~~v~cHnDl~~~Nil~~~~~~~~~lIDfEya~~n~~~fDia~~f 185 (211)
T PF01633_consen 141 SPLVFCHNDLNPGNILINNKDGEVKLIDFEYAGYNDRAFDIANFF 185 (211)
T ss_dssp GGEEEE-S--SGGGEEETSSSSCEEE--GTT-EEEEHHHHHHHHH
T ss_pred CCceEeeccCccccEEeccCCCeEEEecHHHHhhccchhhHHHHH
Confidence 67899999999999999 556668999996 88999999999764
No 42
>COG0510 ycfN Thiamine kinase and related kinases [Coenzyme transport and metabolism]
Probab=99.38 E-value=6.2e-11 Score=102.12 Aligned_cols=199 Identities=16% Similarity=0.154 Sum_probs=105.7
Q ss_pred eeeeeCCccccceEEEEeCCccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEecccCCCC
Q 022304 26 KICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSS 105 (299)
Q Consensus 26 ~~~~~~~G~~n~~y~v~~~~g~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~~~ 105 (299)
.+.+++ |.++.+|++...+.+.|+|.........+ .... .. |+++.......+.......+..|..+
T Consensus 10 ~~~~~~-g~t~~~~~~~~~g~~~~~~r~~~p~~~~~----------~~~~-~~-~~l~~~~~~~~~~~~~~q~~~~~~~l 76 (269)
T COG0510 10 KITPLN-GLTGYAFRIEGEGTRVFLKRNFEPFLPAL----------IFRL-IV-PKLLWLKRIANGGVLVAQYWENGRTL 76 (269)
T ss_pred eeeecc-CCcceeEEeeCCCCeeeeecCCCcchHHH----------HHHh-hh-hhhhhhcccccCCceEEeeecccccc
Confidence 456666 77899999965555888887654322111 1111 11 44443322112333444444445444
Q ss_pred C---CcHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCCCCHHHHHHHhhhHHHHHHHHhhcCChHHHHHHHHH
Q 022304 106 R---GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRL 182 (299)
Q Consensus 106 ~---~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (299)
+ .....++..|+++|........+. ........|..... .+......... ....+...+.++
T Consensus 77 ~~~~~~~~~ia~~L~~lH~~~~~~~~~~-----------~~~~~~~~~~~~l~--~~~~~~~~~~~--~~~~~~~~~~~l 141 (269)
T COG0510 77 TPEDMNLKKIAHILKKLHNSVPLLHQLP-----------RSGSSFIEPKDYLE--LLWQQNSRAYR--DNHLLRKKLKEL 141 (269)
T ss_pred CccccchHHHHHHHHHhcCccchHHHHH-----------hhcchHhhHHHHHH--HHHhhchHHhh--hhHHHHHHHHHH
Confidence 3 345788889999999554211111 00000022322221 11111111100 011122233334
Q ss_pred HHHHhccccCCCCC-cceeccCCCCCCeeecCCCCeEEEccc-cccCCchhhhhhhhhc-CCCh----hhHHHhhhhCCC
Q 022304 183 MKNLAPLFEGVNVE-PCLLHGDLWSGNISSDKNGEPVILDPA-CYYGHNEAEFGMSWCA-GFGG----SFYNSYFEVMPK 255 (299)
Q Consensus 183 ~~~l~~~l~~~~~~-~~liHgDl~~~Nvl~~~~~~~~iID~~-~~~g~~~~Dla~~~~~-~~~~----~f~~~Y~~~~~l 255 (299)
...+.+. +.+ .++||+|++++|+|.++.+...+|||+ ++.+||++|||.+... .+.. ..+..|.+..+.
T Consensus 142 ~~~l~~~----~~~~~v~cH~Dl~~~N~l~t~~~~l~LIDWEyAg~~D~~~DLA~~~~e~~~~~~~~~~~~~~~~~~~~~ 217 (269)
T COG0510 142 RRALEEV----PKDDLVPCHNDLNPGNLLLTDKGGLFLIDWEYAGLNDPAFDLAALLSEYIFNHNELEDLYSAYLEKYGF 217 (269)
T ss_pred HHHhhhc----CCCceeeecCCCCccceEEcCCCcEEEEecccCCCccHHHHHHHHHHHhccchhHHHHHHHHHHHhCCc
Confidence 3333333 334 799999999999999885669999996 8999999999987542 2322 255566655554
Q ss_pred C
Q 022304 256 Q 256 (299)
Q Consensus 256 ~ 256 (299)
.
T Consensus 218 ~ 218 (269)
T COG0510 218 E 218 (269)
T ss_pred h
Confidence 4
No 43
>KOG4720 consensus Ethanolamine kinase [Lipid transport and metabolism]
Probab=99.37 E-value=6.8e-12 Score=105.86 Aligned_cols=222 Identities=14% Similarity=0.132 Sum_probs=136.7
Q ss_pred HHHHHHhcCC--CcceeeeeeeCCccccceEEEEeCC---ccEEEEecCCCCcchHHH--HHHHHHHHHhcCCCCCccce
Q 022304 11 IREWILSEGK--ATHITKICPVGGGCINLASRYGTDA---GSFFVKTNRSIGPSMFEG--EALGLGAMYETRTIRAPRPF 83 (299)
Q Consensus 11 i~~~l~~~~~--~~~~~~~~~~~~G~~n~~y~v~~~~---g~~vlK~~~~~~~~~~~~--E~~~l~~L~~~~~~~vP~~~ 83 (299)
+.++|++.-+ +..-++.+..++|-+|..+.+...+ ..+.+|++...+...+.+ |....+.|+.+ | -.|++|
T Consensus 68 a~eLlk~Lrp~W~~~~v~~~~fs~gitNkL~~~~vg~~~e~~v~vrvyg~~te~vIdre~Ev~afk~L~a~-G-~ap~Ly 145 (391)
T KOG4720|consen 68 ALELLKKLRPHWKPPEVTFKRFSDGITNKLFSCYVGENMEDHVLVRVYGHNTELVIDRENEVIAFKLLAAY-G-FAPKLY 145 (391)
T ss_pred HHHHHHHhcccCCccceeeeeeccchhHHHHHhhcccccceeEEEEeccCCCceeeccHHHHHHHHHHHHc-C-cChhhh
Confidence 4556666622 4455667788899888777665544 378889998755444444 45555677776 2 457788
Q ss_pred eecccCCCceEEEEecccCCCCC-------CcHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCCCCHHHHHHH
Q 022304 84 KVGALPTGGSYIIMEFIEFGSSR-------GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAE 156 (299)
Q Consensus 84 ~~~~~~~~~~~~v~e~l~G~~~~-------~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 156 (299)
..- ...++++|++|..+. ..+..+++.+|+||+.-.+ | ..|..+-|. ....|+..
T Consensus 146 ~tF-----~NGLvyefi~g~tL~p~~mr~pki~~lIAr~mak~H~~~~~----g--------~~pkp~lw~-km~~f~~l 207 (391)
T KOG4720|consen 146 GTF-----NNGLVYEFIQGKTLEPEHMREPKIFRLIARRMAKIHSIVAT----G--------GNPKPPLWE-KMRKFLQL 207 (391)
T ss_pred hee-----cCceEEeeecCcccChhhccChHHHHHHHHHHHHhheeccC----C--------CCCCCcHHH-HHHHHHHh
Confidence 653 347999999999873 4678999999999998863 1 122222231 12233321
Q ss_pred hhhHHHHHHHHhhc-CChHHHHHHHHHHHHHhccccCCCCCcceeccCCCCCCeeecCCC-CeEEEcc-ccccCCchhhh
Q 022304 157 HRLGYQLKLALDQY-GDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNG-EPVILDP-ACYYGHNEAEF 233 (299)
Q Consensus 157 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~liHgDl~~~Nvl~~~~~-~~~iID~-~~~~g~~~~Dl 233 (299)
..- ...+...++. .+..-.+.+.+-+.++++.+..+..|.++||.||=++||+.+... .+-+||. .+.+...+|||
T Consensus 208 v~~-~f~de~~kq~~~~~~~~~~L~~Ei~~l~E~l~~L~sPVVFcHNDLL~~Niiy~~~~~~v~fIDYEYa~yNY~afDI 286 (391)
T KOG4720|consen 208 VPT-SFEDEINKQNLFDEPSPEDLGEEISKLKEMLSMLKSPVVFCHNDLLCGNIIYDSEKGSVEFIDYEYAGYNYQAFDI 286 (391)
T ss_pred cCc-hhhcccchhhcccCCCHHHHHHHHHHHHHHHHhhCCCeEEeecchhhcceeeccccCcEEEEeecccccchhheeh
Confidence 000 0000001111 010002233334445555555555789999999999999998653 4679997 58999999999
Q ss_pred hh-h-hhcCC--------C-----hhhHHHhhhhC
Q 022304 234 GM-S-WCAGF--------G-----GSFYNSYFEVM 253 (299)
Q Consensus 234 a~-~-~~~~~--------~-----~~f~~~Y~~~~ 253 (299)
+. + .+.|. + -+|+..|.+..
T Consensus 287 gNHFnE~aGv~evDYSlyp~rE~Q~qwl~~YLq~~ 321 (391)
T KOG4720|consen 287 GNHFNEYAGVEEVDYSLYPTREEQLQWLRDYLQAY 321 (391)
T ss_pred hhhHHhhcCCCccchhcCCCHHHHHHHHHHHHhhc
Confidence 95 2 33332 1 16788887764
No 44
>COG3178 Predicted phosphotransferase related to Ser/Thr protein kinases [General function prediction only]
Probab=99.36 E-value=2e-11 Score=103.21 Aligned_cols=178 Identities=14% Similarity=0.100 Sum_probs=107.1
Q ss_pred HHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEecccCCCC-----CCc---HHHHHHHHHHHHhcCCCCCCCCCC
Q 022304 61 FEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSS-----RGN---QSVFGKKLAEMHKAGKSSKGFGFD 132 (299)
Q Consensus 61 ~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~~~-----~~~---~~~lg~~La~lH~~~~~~~~~~~~ 132 (299)
+..-+.+-..|... |+.||+++..|. ...++++|.+.-+.. .+. ..+.++.|+.+|....+..
T Consensus 67 v~~Fvai~~lL~~~-Gv~vPqIla~Dl---d~GfllLedLG~e~~l~~~g~~~~ery~~a~~ll~~~h~~~~~~q----- 137 (351)
T COG3178 67 VRPFVAIAGLLAGQ-GVRVPQILAADL---DQGFLLLEDLGRETFLQALGEPIAERYAAADALLAAAHGALVPLQ----- 137 (351)
T ss_pred hhHHHHHHHHHhcC-CcCccHHhhhch---hcCchhHhhcCcHHHHHhcCCCchhHHHHHHHHHHHHhcCcchhh-----
Confidence 33445566677765 899999999884 588999998855432 123 3467799999999887421
Q ss_pred CCCccc---ccccCCCCCCCHHHHHH-Hhhh--HHHHHHHHhhcCChHHHHHHHHHHHHHhccccCCCCCcceeccCCCC
Q 022304 133 VDNTIG---STPQINKWTSNWIEFYA-EHRL--GYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWS 206 (299)
Q Consensus 133 ~~~~~g---~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~liHgDl~~ 206 (299)
.....| .+|. . + +...+ +..+ +.++..-...-.+....+.++++.+.+..-+. ..+.++||.|||+
T Consensus 138 ~~~~~g~~~~lp~---f-D--r~am~~E~sLf~dWylpr~~g~~l~~~~r~~~~aiwd~Lid~~~--~~~~vlvhRDfh~ 209 (351)
T COG3178 138 KAVREGSTHVLPP---F-D--RAAMRREASLFVDWYLPRHLGRPLTDAERQAWEAIWDGLIDSLL--AQPKVLVHRDFHS 209 (351)
T ss_pred cccCCCCCCcCCc---c-c--HHHHHHHHHhhHHhhhHHHhCCCCCHHHHHHHHHHHHHHHHHHh--cCCceeeeccccC
Confidence 001111 1111 1 0 11111 0001 11111111111122334445555555433222 2588999999999
Q ss_pred CCeeecCC----CCeEEEcc-ccccCCchhhhhhhhh---cCCC----hhhHHHhhhhCCC
Q 022304 207 GNISSDKN----GEPVILDP-ACYYGHNEAEFGMSWC---AGFG----GSFYNSYFEVMPK 255 (299)
Q Consensus 207 ~Nvl~~~~----~~~~iID~-~~~~g~~~~Dla~~~~---~~~~----~~f~~~Y~~~~~l 255 (299)
.|+|+..+ ..++|||| ++++|+..||++.+.. ..++ .+.+..|.+.+..
T Consensus 210 ~NLmw~~~~~g~~rvGvlDFQDA~iGP~aYDvasL~~DArvt~~pe~~~~~l~rY~~~r~~ 270 (351)
T COG3178 210 RNLMWTADRAGADRVGVLDFQDALIGPIAYDVASLLRDARVTWSPERELALLDRYWAARRA 270 (351)
T ss_pred ccceecCCccCCCCCceeehhhhhcCcchhhHHHHHhhccccCCHHHHHHHHHHHHHhhhh
Confidence 99999876 24899998 7999999999998742 2344 3678999987653
No 45
>COG4857 Predicted kinase [General function prediction only]
Probab=99.35 E-value=1.6e-11 Score=102.94 Aligned_cols=194 Identities=19% Similarity=0.175 Sum_probs=115.3
Q ss_pred eeeeeeeCCccccceEEEEeCCc--cEEEEecCCC----------CcchHHHHHHHHHHHHhcCCCCCccceeecccCCC
Q 022304 24 ITKICPVGGGCINLASRYGTDAG--SFFVKTNRSI----------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTG 91 (299)
Q Consensus 24 ~~~~~~~~~G~~n~~y~v~~~~g--~~vlK~~~~~----------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~ 91 (299)
--.+..+|.|..|.+|.|+...| ..|+|.+-+. ...+-..|+..|..-.++.+--||++|.++. .
T Consensus 32 ~ltvkEIGDGNlNyvF~V~~~~~~ka~ivKQA~py~r~vGeswPL~l~Rs~iE~~aL~rq~~~aPh~VPeIyf~De---~ 108 (408)
T COG4857 32 HLTVKEIGDGNLNYVFIVEGKIGGKAAIVKQALPYVRLVGESWPLPLKRSFIEYHALRRQNARAPHFVPEIYFFDE---I 108 (408)
T ss_pred ceEEEEecCCceeEEEEEecCCCCeehhhhhhhhHHHhcCCcCCCcchHHHHHHHHHHHhhccCCCCcceeEeecc---h
Confidence 34578999999999999998655 7888987531 1122345777776666666778999999984 5
Q ss_pred ceEEEEecc-----------cCCCCCCcHHHHHHHHHHHHhcCCCC-----------CCCCCCCCCccc-------cccc
Q 022304 92 GSYIIMEFI-----------EFGSSRGNQSVFGKKLAEMHKAGKSS-----------KGFGFDVDNTIG-------STPQ 142 (299)
Q Consensus 92 ~~~~v~e~l-----------~G~~~~~~~~~lg~~La~lH~~~~~~-----------~~~~~~~~~~~g-------~~~~ 142 (299)
...++||++ +|+.++.....+|..|++.--..+.. ..|. .+..+. +-|.
T Consensus 109 mavivMEdls~~kilR~~LI~Gr~~P~~~~~igeFlarTLf~~sDl~m~~k~kK~~vk~Ft--NpELCDItE~LVFtdPy 186 (408)
T COG4857 109 MAVIVMEDLSPHKILRRALIDGRILPNIVDDIGEFLARTLFRGSDLSMNTKDKKADVKLFT--NPELCDITENLVFTDPY 186 (408)
T ss_pred hhhhhHhhhhHHHHHHHHHhccccCccHHHHHHHHHHHHHHhccccccchHhHHHHHHHhC--CchhhcchhceeecCcc
Confidence 888999886 45555666778888888743333210 0011 111110 0011
Q ss_pred CCCCCCCHHHHHHHhhhHHHHHHHHhhcCChHHHHHHHHHHHHHhccccCCCCCcceeccCCCCCCeeecCCCCeEEEcc
Q 022304 143 INKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDP 222 (299)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~liHgDl~~~Nvl~~~~~~~~iID~ 222 (299)
. ..+-..+-. .++.+....+.+ +..+.-. .++++..+.. ..-.|||||+|+|.|++++. ...+||+
T Consensus 187 f---d~d~Nr~~~-~~l~~fVe~L~~---n~dlkve----a~kLk~~F~~--~aetLiHGDLHsGSIfvte~-etkvIDP 252 (408)
T COG4857 187 F---DADRNRHTI-PQLDPFVEELRK---NRDLKVE----AQKLKHKFMA--YAETLIHGDLHSGSIFVTEK-ETKVIDP 252 (408)
T ss_pred c---ccccccccc-ccchHHHHHHhc---Ccchhhh----HHHHHHHHHH--HhHHHhccccccCcEEeecC-cceeeCc
Confidence 0 000000000 012222222211 1111111 2234444432 35689999999999999755 4889998
Q ss_pred c-cccCCchhhhhhh
Q 022304 223 A-CYYGHNEAEFGMS 236 (299)
Q Consensus 223 ~-~~~g~~~~Dla~~ 236 (299)
+ ++|||-+||++++
T Consensus 253 EFaFYGPmafDiG~~ 267 (408)
T COG4857 253 EFAFYGPMAFDIGML 267 (408)
T ss_pred cccccCcchhhHHHH
Confidence 6 8999999999986
No 46
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.30 E-value=4e-11 Score=98.95 Aligned_cols=155 Identities=18% Similarity=0.209 Sum_probs=98.9
Q ss_pred eCCccccceEEEEeCCccEEEEecCCCC-----------cchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEe
Q 022304 30 VGGGCINLASRYGTDAGSFFVKTNRSIG-----------PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 98 (299)
Q Consensus 30 ~~~G~~n~~y~v~~~~g~~vlK~~~~~~-----------~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e 98 (299)
++.|..+.+|+....+..+++|...... ...+..|.+++..|... ++++|.++..+ ....+++||
T Consensus 2 ig~G~~~~vy~~~~~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~-~i~~p~~~~~~---~~~~~lv~e 77 (199)
T TIGR03724 2 IAKGAEAIIYLGDFLGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKA-GVNTPVVYDVD---PDNKTIVME 77 (199)
T ss_pred CCCCceEEEEEeecCCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHC-CCCCCEEEEEE---CCCCEEEEE
Confidence 4667788999998666689999854311 13355799999999875 68999998875 346799999
Q ss_pred cccCCCCCCcHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCCCCHHHHHHHhhhHHHHHHHHhhcCChHHHHH
Q 022304 99 FIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQR 178 (299)
Q Consensus 99 ~l~G~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (299)
+++|.++. ..+.. .. .. +
T Consensus 78 ~~~g~~l~-------~~~~~----~~--------------------------~~------~------------------- 95 (199)
T TIGR03724 78 YIEGKPLK-------DVIEE----GN--------------------------DE------L------------------- 95 (199)
T ss_pred EECCccHH-------HHHhh----cH--------------------------HH------H-------------------
Confidence 99997441 11100 00 00 0
Q ss_pred HHHHHHHHhccccCCCCCcceeccCCCCCCeeecCCCCeEEEccc-cccCCchhhhhhhh------hc----CCC----h
Q 022304 179 GHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA-CYYGHNEAEFGMSW------CA----GFG----G 243 (299)
Q Consensus 179 ~~~~~~~l~~~l~~~~~~~~liHgDl~~~Nvl~~~~~~~~iID~~-~~~g~~~~Dla~~~------~~----~~~----~ 243 (299)
+.++...+..+. ..+++|||++|+|++++ ++.+.+|||+ +..+++..|.+.-. .. ... .
T Consensus 96 ~~~i~~~l~~lH-----~~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (199)
T TIGR03724 96 LREIGRLVGKLH-----KAGIVHGDLTTSNIIVR-DDKLYLIDFGLGKYSDEIEDKAVDLHVLKRSLESTHPDKAEELFE 169 (199)
T ss_pred HHHHHHHHHHHH-----HCCeecCCCCcceEEEE-CCcEEEEECCCCcCCCcHHhhhchHHHHHHHHhhhCchhHHHHHH
Confidence 001111111111 24789999999999998 5668999996 56888888876421 11 111 3
Q ss_pred hhHHHhhhhCCCC
Q 022304 244 SFYNSYFEVMPKQ 256 (299)
Q Consensus 244 ~f~~~Y~~~~~l~ 256 (299)
.|+++|.+..+.+
T Consensus 170 ~fl~~Y~~~~~~~ 182 (199)
T TIGR03724 170 AFLEGYREEFGEA 182 (199)
T ss_pred HHHHHHHhhcccH
Confidence 6778888765443
No 47
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.28 E-value=3.8e-11 Score=95.42 Aligned_cols=153 Identities=19% Similarity=0.173 Sum_probs=97.4
Q ss_pred eCCccccceEEEEeCCccEEEEecCCC-----------CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEe
Q 022304 30 VGGGCINLASRYGTDAGSFFVKTNRSI-----------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 98 (299)
Q Consensus 30 ~~~G~~n~~y~v~~~~g~~vlK~~~~~-----------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e 98 (299)
+..|..+.+|...--+.+.|+|.-.+. .+.+...|+.++..+... |+|+|.++.++. ....++||
T Consensus 4 i~~GAEa~i~~~~~~g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~-GV~~P~v~dvD~---~~~~I~me 79 (204)
T COG3642 4 IKQGAEAIIYLTDFLGLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREA-GVPVPIVYDVDP---DNGLIVME 79 (204)
T ss_pred hhCCcceeEEeeeccCcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHc-CCCCCeEEEEcC---CCCEEEEE
Confidence 456667777777554447788764331 124457899999999876 899999999984 57899999
Q ss_pred cccCCCCCCcHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCCCCHHHHHHHhhhHHHHHHHHhhcCChHHHHH
Q 022304 99 FIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQR 178 (299)
Q Consensus 99 ~l~G~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (299)
|++|..+.+. +-.- .. +. ...
T Consensus 80 ~I~G~~lkd~-------l~~~---~~---------------------------~~----------------------~r~ 100 (204)
T COG3642 80 YIEGELLKDA-------LEEA---RP---------------------------DL----------------------LRE 100 (204)
T ss_pred EeCChhHHHH-------HHhc---ch---------------------------HH----------------------HHH
Confidence 9999743100 0000 00 00 001
Q ss_pred HHHHHHHHhccccCCCCCcceeccCCCCCCeeecCCCCeEEEccc-cccCCchhhhhh----hh--hc----C---CChh
Q 022304 179 GHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA-CYYGHNEAEFGM----SW--CA----G---FGGS 244 (299)
Q Consensus 179 ~~~~~~~l~~~l~~~~~~~~liHgDl~~~Nvl~~~~~~~~iID~~-~~~g~~~~Dla~----~~--~~----~---~~~~ 244 (299)
+=+++.+ + -...+||||+.+.|+++++++ +.+|||. +.+.+-.-|.|+ +. +. . .-++
T Consensus 101 vG~~vg~---l-----H~~givHGDLTtsNiIl~~~~-i~~IDfGLg~~s~~~Ed~aVDl~Vleral~sth~~~e~l~~~ 171 (204)
T COG3642 101 VGRLVGK---L-----HKAGIVHGDLTTSNIILSGGR-IYFIDFGLGEFSDEVEDKAVDLHVLERALESTHEKAEELFAA 171 (204)
T ss_pred HHHHHHH---H-----HhcCeecCCCccceEEEeCCc-EEEEECCcccccccHHhhhchHHHHHHHHHhccccHHHHHHH
Confidence 1111221 1 146899999999999997665 9999985 556666666664 31 11 1 1258
Q ss_pred hHHHhhhhCC
Q 022304 245 FYNSYFEVMP 254 (299)
Q Consensus 245 f~~~Y~~~~~ 254 (299)
|++||.+..+
T Consensus 172 f~~gY~~~~~ 181 (204)
T COG3642 172 FLEGYREEFG 181 (204)
T ss_pred HHHHHHHHhc
Confidence 9999987654
No 48
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.26 E-value=9e-11 Score=98.12 Aligned_cols=92 Identities=15% Similarity=0.058 Sum_probs=66.4
Q ss_pred HHHHHhcCCCcceeeeeeeCCccccceEEEEeCCccEEEEecCCC---Ccc---------hHHHHHHHHHHHHhcCCCCC
Q 022304 12 REWILSEGKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRSI---GPS---------MFEGEALGLGAMYETRTIRA 79 (299)
Q Consensus 12 ~~~l~~~~~~~~~~~~~~~~~G~~n~~y~v~~~~g~~vlK~~~~~---~~~---------~~~~E~~~l~~L~~~~~~~v 79 (299)
.+++... +..+..-+..+++|..+.||.++.+.+.+++|..++. ... .+++|+..+..|.+. ++++
T Consensus 22 ~~~~~~~-l~~~y~~~~~l~~~~f~~v~l~~~~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~-GI~~ 99 (232)
T PRK10359 22 KEIFDDF-LSYNIKTIKVFRNIDDTKVSLIDTDYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSE-GLAS 99 (232)
T ss_pred HHHHHHH-hhCceEEEEEecCCCceEEEEEecCCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHC-CCCc
Confidence 3445455 4556667778888888999999887679999999752 111 157888888888654 7899
Q ss_pred ccceeecccC-----CCceEEEEecccCCCC
Q 022304 80 PRPFKVGALP-----TGGSYIIMEFIEFGSS 105 (299)
Q Consensus 80 P~~~~~~~~~-----~~~~~~v~e~l~G~~~ 105 (299)
|..+...... .+..+++|||++|.++
T Consensus 100 ~~d~~~~~~~~~~~~~~~~~lvmEyi~G~tL 130 (232)
T PRK10359 100 LNDFYLLAERKTLRYAHTYIMLIEYIEGVEL 130 (232)
T ss_pred ceEeeeecccccccccCCeEEEEEEECCccH
Confidence 8877554321 3578999999999744
No 49
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.23 E-value=2.3e-10 Score=97.23 Aligned_cols=71 Identities=18% Similarity=0.123 Sum_probs=53.6
Q ss_pred CccccceEEEEeCCccEEEEecCCC----------------CcchHHHHHHHHHHHHhcCCCCCccceeecccCC---Cc
Q 022304 32 GGCINLASRYGTDAGSFFVKTNRSI----------------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPT---GG 92 (299)
Q Consensus 32 ~G~~n~~y~v~~~~g~~vlK~~~~~----------------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~---~~ 92 (299)
.|..|.+|+|++++++++||.+... ......+|.+.+..|... +++||+++....... ..
T Consensus 42 ~~g~gtv~~v~~~~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~-gi~vP~pl~~~~~~~~~~~~ 120 (239)
T PRK01723 42 AKGRGTTWFVQTPGVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEA-GLPVPRPIAARVVRHGLFYR 120 (239)
T ss_pred CCCCccEEEEEeCCceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhC-CCCCceeEeeeeeecCccee
Confidence 5567999999999889999988421 123467799999999876 799999998744322 24
Q ss_pred eEEEEecccCC
Q 022304 93 SYIIMEFIEFG 103 (299)
Q Consensus 93 ~~~v~e~l~G~ 103 (299)
.++++++++|.
T Consensus 121 ~~lV~e~l~G~ 131 (239)
T PRK01723 121 ADILIERIEGA 131 (239)
T ss_pred eeEEEEecCCC
Confidence 56999999984
No 50
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=99.22 E-value=7.1e-11 Score=99.25 Aligned_cols=136 Identities=21% Similarity=0.231 Sum_probs=96.4
Q ss_pred eeeCCccccceEEEEeCCc-cEEEEecCCC-------------------------CcchHHHHHHHHHHHHhcCCCCCcc
Q 022304 28 CPVGGGCINLASRYGTDAG-SFFVKTNRSI-------------------------GPSMFEGEALGLGAMYETRTIRAPR 81 (299)
Q Consensus 28 ~~~~~G~~n~~y~v~~~~g-~~vlK~~~~~-------------------------~~~~~~~E~~~l~~L~~~~~~~vP~ 81 (299)
.++|-|-.+.+|.+.+.+| ++++|+.+.. ++...++|+++|+.|... |++||+
T Consensus 97 ~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~-G~~VP~ 175 (304)
T COG0478 97 TKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPE-GVKVPK 175 (304)
T ss_pred cccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhc-CCCCCC
Confidence 5788899999999999766 8999988531 112346899999999987 799999
Q ss_pred ceeecccCCCceEEEEecccCCCCCCcHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCCCCHHHHHHHhhhHH
Q 022304 82 PFKVGALPTGGSYIIMEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGY 161 (299)
Q Consensus 82 ~~~~~~~~~~~~~~v~e~l~G~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 161 (299)
|+... +++++||+++|.++... ++ .. .+ ..
T Consensus 176 P~~~n-----RHaVvMe~ieG~eL~~~---------r~---~~-----------------------en---------~~- 205 (304)
T COG0478 176 PIAWN-----RHAVVMEYIEGVELYRL---------RL---DV-----------------------EN---------PD- 205 (304)
T ss_pred ccccc-----cceeeeehcccceeecc---------cC---cc-----------------------cC---------HH-
Confidence 99986 66999999999765210 00 00 00 00
Q ss_pred HHHHHHhhcCChHHHHHHHHHHHHHhccccCCCCCcceeccCCCCCCeeecCCCCeEEEcc-ccc-cCCchhhhh
Q 022304 162 QLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDP-ACY-YGHNEAEFG 234 (299)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~liHgDl~~~Nvl~~~~~~~~iID~-~~~-~g~~~~Dla 234 (299)
+.++.+++.+..+. ..+++||||..-||++++||.+.+||| .+. .++|..+.-
T Consensus 206 ---------------~il~~il~~~~~~~-----~~GiVHGDlSefNIlV~~dg~~~vIDwPQ~v~~~hp~a~e~ 260 (304)
T COG0478 206 ---------------EILDKILEEVRKAY-----RRGIVHGDLSEFNILVTEDGDIVVIDWPQAVPISHPDAEEL 260 (304)
T ss_pred ---------------HHHHHHHHHHHHHH-----HcCccccCCchheEEEecCCCEEEEeCcccccCCCCCHHHH
Confidence 11122222233222 368999999999999999988999997 664 788876543
No 51
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.22 E-value=1.7e-10 Score=96.09 Aligned_cols=139 Identities=15% Similarity=0.128 Sum_probs=91.5
Q ss_pred eeeCCccccceEEEEeCCccEEEEecCCCC-----------cchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEE
Q 022304 28 CPVGGGCINLASRYGTDAGSFFVKTNRSIG-----------PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII 96 (299)
Q Consensus 28 ~~~~~G~~n~~y~v~~~~g~~vlK~~~~~~-----------~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v 96 (299)
+.++.|..+.+|+....++.+++|...+.. ......|.+.+..+... ++++|.++..+ ....+++
T Consensus 2 ~~l~~G~~~~vy~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~-~i~~p~~~~~~---~~~~~lv 77 (211)
T PRK14879 2 KLIKRGAEAEIYLGDFLGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKA-GVNVPAVYFVD---PENFIIV 77 (211)
T ss_pred cccccCceEEEEEEeeCCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHC-CCCCCeEEEEe---CCCCEEE
Confidence 467888889999998776789999765321 12356788899888765 68999998765 3577999
Q ss_pred EecccCCCCCCcHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCCCCHHHHHHHhhhHHHHHHHHhhcCChHHH
Q 022304 97 MEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIY 176 (299)
Q Consensus 97 ~e~l~G~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (299)
|||++|.++. ..+.. .. + .. ..+
T Consensus 78 ~e~~~G~~L~-------~~~~~----~~-------------------------~-~~---~~i----------------- 100 (211)
T PRK14879 78 MEYIEGEPLK-------DLINS----NG-------------------------M-EE---LEL----------------- 100 (211)
T ss_pred EEEeCCcCHH-------HHHHh----cc-------------------------H-HH---HHH-----------------
Confidence 9999997541 11110 00 0 00 001
Q ss_pred HHHHHHHHHHhccccCCCCCcceeccCCCCCCeeecCCCCeEEEccc-cccCCchhhhhh
Q 022304 177 QRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA-CYYGHNEAEFGM 235 (299)
Q Consensus 177 ~~~~~~~~~l~~~l~~~~~~~~liHgDl~~~Nvl~~~~~~~~iID~~-~~~g~~~~Dla~ 235 (299)
+.++...+..+. ..+++|||++|+|||++ ++.+.+|||+ +..+++..|.+.
T Consensus 101 --~~~i~~~l~~lH-----~~~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~~~~~~~~~~ 152 (211)
T PRK14879 101 --SREIGRLVGKLH-----SAGIIHGDLTTSNMILS-GGKIYLIDFGLAEFSKDLEDRAV 152 (211)
T ss_pred --HHHHHHHHHHHH-----hCCcccCCCCcccEEEE-CCCEEEEECCcccCCCcHHhhhc
Confidence 011111111111 24789999999999998 5568999996 568888888774
No 52
>TIGR02457 TreS_Cterm trehalose synthase-fused probable maltokinase. Three pathways for the biosynthesis of trehalose, an osmoprotectant that in some species is also a precursor of certain cell wall glycolipids. Trehalose synthase, TreS, can interconvert maltose and trehalose, but while the equilibrium may favor trehalose, physiological concentrations of trehalose may be much greater than that of maltose and TreS may act largely in its degradation. This model describes a domain found only as a C-terminal fusion to TreS proteins. The most closely related proteins outside this family, Pep2 of Streptomyces coelicolor and Mak1 of Actinoplanes missouriensis, have known maltokinase activity. We suggest this domain acts as a maltokinase and helps drive conversion of trehalose to maltose.
Probab=99.10 E-value=5e-09 Score=97.70 Aligned_cols=252 Identities=15% Similarity=0.124 Sum_probs=135.7
Q ss_pred eeeeeCCccccceEEEEeCCccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCCccceeecccC--CC---ceEEEEecc
Q 022304 26 KICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALP--TG---GSYIIMEFI 100 (299)
Q Consensus 26 ~~~~~~~G~~n~~y~v~~~~g~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~--~~---~~~~v~e~l 100 (299)
++..+++.++|....+ +.++|+|+++.-... ..=|.++.++|.+.+--.+|.++..-... +| .-.++.+|+
T Consensus 169 ~~r~l~~EQSNtSi~~---g~~~ilKlyRrl~~G-~nPe~E~~r~Lte~gf~~vP~llG~v~~~~~~g~~~tla~lq~fV 244 (528)
T TIGR02457 169 EVRLLSAEQSNSSLVV---GDRVVLKLYRKVEPG-INPEIEMGRYLTAAGYANIPPLLGSVERVGGDQAPHTLGLLQGYV 244 (528)
T ss_pred ceeecCCCcCceEEEE---CCEEEEEEecccCCC-CCcchHHHHHHHhCCCccCCcccEEEEEEcCCCCEEeeehHhhhh
Confidence 3456666677777666 348999999852111 22357778889875434689998764321 23 345677888
Q ss_pred cCCCCC----------------------------------CcHHHHHHHHHHHHhcCCCCC---CCCCCCCCcccccccC
Q 022304 101 EFGSSR----------------------------------GNQSVFGKKLAEMHKAGKSSK---GFGFDVDNTIGSTPQI 143 (299)
Q Consensus 101 ~G~~~~----------------------------------~~~~~lg~~La~lH~~~~~~~---~~~~~~~~~~g~~~~~ 143 (299)
++..-. ..+..+|+.+|.||...+... .|+. .|..
T Consensus 245 ~nqgDaW~~tl~~l~r~~e~~~~~~~~~~~~~~~~~~~~~~~a~~LG~rtAemH~aLA~~~~~~aF~p--------ep~~ 316 (528)
T TIGR02457 245 QNQGDAWRWTLGHLKRYIEEQLSPCANGALAPTLIGAGYLEFAGLLGRRLAELHLALAAGGEDPAFAP--------EPIS 316 (528)
T ss_pred CCCccHHHHHHHHHHHHHHhhhccccccccChhhhhhhHHHHHHHHHHHHHHHHHHHhcCCCCCCCCC--------CCCC
Confidence 875310 015679999999999887421 1221 1110
Q ss_pred CCCCCCHHHHHHHhhhHHHHHHHHhh--cCChHHHH-------HHHHHHHHHhccccCCCCCcce---eccCCCCCCeee
Q 022304 144 NKWTSNWIEFYAEHRLGYQLKLALDQ--YGDSTIYQ-------RGHRLMKNLAPLFEGVNVEPCL---LHGDLWSGNISS 211 (299)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-------~~~~~~~~l~~~l~~~~~~~~l---iHgDl~~~Nvl~ 211 (299)
......|.+-.. .++...++.+... ..+....+ .-+++.+++..+... ...++ ||||+|.||||+
T Consensus 317 ~~~~~~~~~~~~-~~~~~a~~~L~~~~~~l~~~~~~~~~~l~~~~~~l~~~~~~l~~~--~~~~~k~RiHGD~HLgqvL~ 393 (528)
T TIGR02457 317 TLYQRSWYQDMR-AQAERALQLLAQSRDGLPAAARALADRLLAQRKELAAHLRPLVKR--EIDGLKIRIHGDFHLGQVLV 393 (528)
T ss_pred HHHHHHHHHHHH-HHHHHHHHHHHhhhccCChhHHHHHHHHHHHHHHHHHHHHHHhhc--CCCcceEeEecCcchhcEEE
Confidence 001112222211 1222222222111 11222122 222233333333332 23345 999999999999
Q ss_pred cCCCCeEEEccc--c--------ccCCchhhhhh-h-hh--------cC-----CC------------------hhhHHH
Q 022304 212 DKNGEPVILDPA--C--------YYGHNEAEFGM-S-WC--------AG-----FG------------------GSFYNS 248 (299)
Q Consensus 212 ~~~~~~~iID~~--~--------~~g~~~~Dla~-~-~~--------~~-----~~------------------~~f~~~ 248 (299)
++++ ..||||+ + .--.|..|+|- + +| .. .+ .+|+++
T Consensus 394 t~~d-~~IiDFEGEP~Rpl~ERR~k~sPLRDVAGMLRSf~YAa~~~~~~~~~~~~~~~~~~l~~~a~~W~~~~~~aFL~~ 472 (528)
T TIGR02457 394 VQDD-AVLIDFEGEPARPLAERRAKRSPLRDVAGMLRSFDYAAAVALRRAAAAGAPEDRPALEAWAEQFRYRAGQAFLAA 472 (528)
T ss_pred eCCC-eEEEcCCCCCCCChHHhccCCChHHHHHHHHHHHHHHHHHHhhhcccccCcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 8766 6699974 2 23678999984 4 21 11 00 259999
Q ss_pred hhhhCC------CCC-CHHHHHHHHHHHHHH---HHHHhhCcccHHHHHHHHHHH
Q 022304 249 YFEVMP------KQP-GFEKRRDLYMLYHYL---NHYNLFGSGYRSSALSIIDDY 293 (299)
Q Consensus 249 Y~~~~~------l~~-~~~~r~~~~~l~~~l---~~~~~~~~~~~~~~~~~~~~~ 293 (299)
|.+... .++ +....+.+|.+-.++ ..-....++|.....+.+.++
T Consensus 473 Y~~~~~~~~~~p~d~~~~~~LL~~flLeKA~YE~~YE~~nRP~Wv~IPL~gi~~l 527 (528)
T TIGR02457 473 YREAMDASPLVPTEPRDAEALLRLFLLEKAAYELCYELANRPEWLPVPLNGLLRL 527 (528)
T ss_pred HHHhhcCcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHcCCccHHHHHHHHHHh
Confidence 998653 121 223344455444433 222334578888777776665
No 53
>PRK09902 hypothetical protein; Provisional
Probab=99.02 E-value=1e-08 Score=84.28 Aligned_cols=181 Identities=11% Similarity=0.059 Sum_probs=109.2
Q ss_pred cchHHHHHHhcCCCcceeeeeeeCC--ccccceEEEEeCCccEEEEecCC---------CCcchHHHHHHHHHHHHhcCC
Q 022304 8 DDPIREWILSEGKATHITKICPVGG--GCINLASRYGTDAGSFFVKTNRS---------IGPSMFEGEALGLGAMYETRT 76 (299)
Q Consensus 8 ~~~i~~~l~~~~~~~~~~~~~~~~~--G~~n~~y~v~~~~g~~vlK~~~~---------~~~~~~~~E~~~l~~L~~~~~ 76 (299)
.+++..|.... ..-+++... |..|.|+++..++..|++|.... -.+..+.+|...++.|.+. +
T Consensus 7 ~~~f~~~w~~~-----~~wve~pN~~rgG~SgV~r~~~~g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~-G 80 (216)
T PRK09902 7 YDEFNHWWATE-----GDWVEEPNYRRNGMSGVQCVERNGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERA-G 80 (216)
T ss_pred hhhHHHHHhCC-----CceecCCCcCCCCcceEEEEEeCCcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHc-C
Confidence 34555666444 123444433 55689999998777899997752 2346688999999999987 7
Q ss_pred CCCccceeecccCC---CceEEEEecccCCCCCCcHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCCCCHHHH
Q 022304 77 IRAPRPFKVGALPT---GGSYIIMEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEF 153 (299)
Q Consensus 77 ~~vP~~~~~~~~~~---~~~~~v~e~l~G~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 153 (299)
+|||+|++.+.... -..++|.+.++|... |...+..- .... +...
T Consensus 81 vPVP~pvf~~~~k~~~~~rA~LVTe~L~g~~~------L~~~l~~~-~~~~---------------------~~~~---- 128 (216)
T PRK09902 81 VIVPKIVFGEAVKIEGEWRALLVTEDMAGFIS------IADWYAQH-AVSP---------------------YSDE---- 128 (216)
T ss_pred CCCCccceeeeeccCCceEEEEEEEeCCCCcc------HHHHHhcC-CcCC---------------------cchH----
Confidence 99999996654331 257889999988522 22222110 0000 0000
Q ss_pred HHHhhhHHHHHHHHhhcCChHHHHHHHHHHHHHhccccCCCCCcceeccCCCCCCeeecCCCC--eEEEcccc------c
Q 022304 154 YAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGE--PVILDPAC------Y 225 (299)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~liHgDl~~~Nvl~~~~~~--~~iID~~~------~ 225 (299)
.. ...+.++...+..+. ..+++|||+.+-||+++.++. +.+||++. .
T Consensus 129 -----~k---------------~~il~~va~~ia~LH-----~~Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r~~l~~ 183 (216)
T PRK09902 129 -----VR---------------QAMLKAVALAFKKMH-----SVNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSRRRLRR 183 (216)
T ss_pred -----HH---------------HHHHHHHHHHHHHHH-----HCCCcCCCCCHhheeecCCCCeeEEEEEhhccchhhhh
Confidence 00 011122222222222 468999999999999985665 78999752 1
Q ss_pred cCCchhhhhhhh-h-cCCCh----hhHHHhhh
Q 022304 226 YGHNEAEFGMSW-C-AGFGG----SFYNSYFE 251 (299)
Q Consensus 226 ~g~~~~Dla~~~-~-~~~~~----~f~~~Y~~ 251 (299)
.....-||..+. . .++++ .|+.+|.+
T Consensus 184 ~~~~~~Dl~~l~r~~~~~s~~~~~~~~~~y~~ 215 (216)
T PRK09902 184 DKAINHDFRQLEKYLEPIPKADWEQVKAYYYA 215 (216)
T ss_pred hhhhHhHHHHHHHhccCCCHHHHHHHHHHHhc
Confidence 355577887763 2 34553 46777753
No 54
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.01 E-value=3.3e-09 Score=97.84 Aligned_cols=100 Identities=18% Similarity=0.117 Sum_probs=69.4
Q ss_pred cccCCcchHHHHHHhcCCCcceee------eeeeCCccccceEEEEeCCc-cEEEEecCCCCcch---------------
Q 022304 3 VAALSDDPIREWILSEGKATHITK------ICPVGGGCINLASRYGTDAG-SFFVKTNRSIGPSM--------------- 60 (299)
Q Consensus 3 ~~~~~~~~i~~~l~~~~~~~~~~~------~~~~~~G~~n~~y~v~~~~g-~~vlK~~~~~~~~~--------------- 60 (299)
|..|+.+++.+.|.+. +|..+.+ -+|++.|...+||+.+..+| .++||+-++.-...
T Consensus 93 v~p~~~~~~~~~l~~e-lg~~~~~~F~~fd~~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~ 171 (437)
T TIGR01982 93 VPPFDFKVARKVIEAA-LGGPLEELFAEFEEKPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIV 171 (437)
T ss_pred CCCCCHHHHHHHHHHH-hCcCHHHHHhhCCCcceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHH
Confidence 5678899999999887 5543332 36799898999999998766 89999987642212
Q ss_pred ----------------------------HHHHHHHHHHHHh----cCCCCCccceeecccCCCceEEEEecccCCCCC
Q 022304 61 ----------------------------FEGEALGLGAMYE----TRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSR 106 (299)
Q Consensus 61 ----------------------------~~~E~~~l~~L~~----~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~~~~ 106 (299)
+..|++.+..+++ ...+.+|+++... .+..+++|||++|.++.
T Consensus 172 ~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~---~~~~vLvmE~i~G~~L~ 246 (437)
T TIGR01982 172 ERLSPDSRRLRPTEVVKEFEKTLRRELDLRREAANASELGENFKNDPGVYVPEVYWDR---TSERVLTMEWIDGIPLS 246 (437)
T ss_pred HHhCccccccCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHhcCCCCCEEeCCEehhh---cCCceEEEEeECCcccc
Confidence 2234444444432 2357889988644 24679999999998764
No 55
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=98.99 E-value=5.9e-09 Score=85.27 Aligned_cols=37 Identities=24% Similarity=0.293 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEecccCCC
Q 022304 62 EGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGS 104 (299)
Q Consensus 62 ~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~~ 104 (299)
++|++.|+.|.+. |+|||+|+... ..+++||++.|..
T Consensus 74 ~kE~r~L~rl~~~-Gv~vP~pi~~~-----~~~lvME~Ig~~~ 110 (197)
T cd05146 74 EKEMHNLKRMQKA-GIPCPEVVVLK-----KHVLVMSFIGDDQ 110 (197)
T ss_pred HHHHHHHHHHHHc-CCCCCeEEEec-----CCEEEEEEcCCCC
Confidence 3899999999987 79999999874 5699999998863
No 56
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.98 E-value=1.2e-08 Score=87.96 Aligned_cols=66 Identities=21% Similarity=0.197 Sum_probs=49.7
Q ss_pred ceEEEEeCCccEEEEecCCCC------------c--chHHHHHHHHHHHHhcCCCCCccceeecccC----CCceEEEEe
Q 022304 37 LASRYGTDAGSFFVKTNRSIG------------P--SMFEGEALGLGAMYETRTIRAPRPFKVGALP----TGGSYIIME 98 (299)
Q Consensus 37 ~~y~v~~~~g~~vlK~~~~~~------------~--~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~----~~~~~~v~e 98 (299)
.|++++.++..|+||.+.... . ....+|...+..|.+. |+|+|+|++++... ....+++++
T Consensus 37 rvvr~~~~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~-GIptP~pVa~~e~~~~~~~~~s~LVte 115 (268)
T PRK15123 37 RTLRFELAGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEV-GVDTMTGVAFGERGSNPATRTSFIITE 115 (268)
T ss_pred eEEEEEECCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHc-CCCCCCeeEEEEecCCCccceeEEEEe
Confidence 377888877799999774321 0 1367899999999887 79999998876432 135899999
Q ss_pred cccCC
Q 022304 99 FIEFG 103 (299)
Q Consensus 99 ~l~G~ 103 (299)
+++|.
T Consensus 116 ~l~~~ 120 (268)
T PRK15123 116 DLAPT 120 (268)
T ss_pred eCCCC
Confidence 99985
No 57
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=98.97 E-value=3.2e-09 Score=100.83 Aligned_cols=161 Identities=17% Similarity=0.153 Sum_probs=99.8
Q ss_pred eeeeCCccccceEEEEeCCccEEEEecCCC-----------CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEE
Q 022304 27 ICPVGGGCINLASRYGTDAGSFFVKTNRSI-----------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI 95 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~~~g~~vlK~~~~~-----------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~ 95 (299)
...++.|..+.||+....+...++|..... ....+..|.++++.+... ++++|.++..+ ....++
T Consensus 338 ~~~iG~G~~g~Vy~~~~~~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~-~i~~p~~~~~~---~~~~~l 413 (535)
T PRK09605 338 DHLIGKGAEADIKKGEYLGRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRA-GVPTPVIYDVD---PEEKTI 413 (535)
T ss_pred cceeccCCcEEEEEEeecCccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhccc-CCCeeEEEEEe---CCCCEE
Confidence 356788888999998766555555543210 013467899999999764 57777766654 346789
Q ss_pred EEecccCCCCCCcHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCCCCHHHHHHHhhhHHHHHHHHhhcCChHH
Q 022304 96 IMEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTI 175 (299)
Q Consensus 96 v~e~l~G~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (299)
+|||++|.++.. .+. .. ..+
T Consensus 414 v~E~~~g~~L~~-------~l~-----~~--------------------------------~~~---------------- 433 (535)
T PRK09605 414 VMEYIGGKDLKD-------VLE-----GN--------------------------------PEL---------------- 433 (535)
T ss_pred EEEecCCCcHHH-------HHH-----HH--------------------------------HHH----------------
Confidence 999999975421 110 00 000
Q ss_pred HHHHHHHHHHHhccccCCCCCcceeccCCCCCCeeecCCCCeEEEccc-cccCCchhhhhhhh------hcC---C----
Q 022304 176 YQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA-CYYGHNEAEFGMSW------CAG---F---- 241 (299)
Q Consensus 176 ~~~~~~~~~~l~~~l~~~~~~~~liHgDl~~~Nvl~~~~~~~~iID~~-~~~g~~~~Dla~~~------~~~---~---- 241 (299)
+.++.+.+..+. ...++|||++|+|||++ ++.+.||||. +..+++..|++..+ +.+ .
T Consensus 434 ---~~~i~~~L~~lH-----~~giiHrDlkp~NILl~-~~~~~liDFGla~~~~~~~d~a~~l~~~~~~~~~~~~~~~~~ 504 (535)
T PRK09605 434 ---VRKVGEIVAKLH-----KAGIVHGDLTTSNFIVR-DDRLYLIDFGLGKYSDLIEDKAVDLHVLKQSLESTHYDFEEL 504 (535)
T ss_pred ---HHHHHHHHHHHH-----hCCCccCCCChHHEEEE-CCcEEEEeCcccccCCchHhhhhhHHHHHHHhcCCCCCHHHH
Confidence 001111111111 24799999999999995 5568999995 67899999988632 111 1
Q ss_pred ChhhHHHhhhhCCCCCCHHH
Q 022304 242 GGSFYNSYFEVMPKQPGFEK 261 (299)
Q Consensus 242 ~~~f~~~Y~~~~~l~~~~~~ 261 (299)
-+.|+++|... +...++.+
T Consensus 505 ~~~fl~gY~~~-~~~~~~~~ 523 (535)
T PRK09605 505 WEAFLEGYRET-EGAEDVLE 523 (535)
T ss_pred HHHHHHhhccC-ccHHHHHH
Confidence 14789999876 44443333
No 58
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.96 E-value=4.2e-09 Score=85.75 Aligned_cols=39 Identities=26% Similarity=0.431 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEeccc--CCCC
Q 022304 61 FEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE--FGSS 105 (299)
Q Consensus 61 ~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~--G~~~ 105 (299)
.++|++.|..+... |++||+|+... ..+++|||++ |.++
T Consensus 55 ~~~E~~~L~~l~~~-Gv~vP~p~~~~-----~~~ivME~I~~~G~~~ 95 (188)
T PF01163_consen 55 AKKEFRNLKRLYEA-GVPVPKPYDYN-----RNVIVMEYIGEDGVPL 95 (188)
T ss_dssp HHHHHHHHHHCCCT-T-SS--EEEEE-----TTEEEEE--EETTEEG
T ss_pred HHHHHHHHHHHHHC-CccCCcEEEEe-----CCEEEEEecCCCccch
Confidence 56899999999876 79999999876 4599999999 6533
No 59
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=98.94 E-value=4.1e-08 Score=78.09 Aligned_cols=165 Identities=20% Similarity=0.190 Sum_probs=102.7
Q ss_pred eeeeeCCccccceEEEEeCCccEEEEecCC-C----------CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceE
Q 022304 26 KICPVGGGCINLASRYGTDAGSFFVKTNRS-I----------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSY 94 (299)
Q Consensus 26 ~~~~~~~G~~n~~y~v~~~~g~~vlK~~~~-~----------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~ 94 (299)
+++.+..|....+++....+..+++|.-.+ . ++.+...|++.|..+... |+++|++++.|. ....
T Consensus 11 ~l~likQGAEArv~~~~~~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~-GI~~P~l~~~D~---~~~~ 86 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSFSGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRAL-GIPAPRLIFIDT---YGGQ 86 (229)
T ss_pred cceeeeccceeeEeeeccCCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHh-CCCCceEEEEec---CCCe
Confidence 677888888888888776666778875432 1 235567899999988876 899999999984 5889
Q ss_pred EEEecccCCCCCCcHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCCCCHHHHHHHhhhHHHHHHHHhhcCChH
Q 022304 95 IIMEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDST 174 (299)
Q Consensus 95 ~v~e~l~G~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (299)
+.|||++|... +-.. -..|..... . +..
T Consensus 87 i~ME~~~g~~~------vk~~-i~~~~~~~~----------------------~-----------------------d~~ 114 (229)
T KOG3087|consen 87 IYMEFIDGAST------VKDF-ILSTMEDES----------------------E-----------------------DEG 114 (229)
T ss_pred EEEEeccchhH------HHHH-HHHHccCcc----------------------c-----------------------chh
Confidence 99999998522 1111 111111100 0 000
Q ss_pred HHHHHHHHHHHHhccccCCCCCcceeccCCCCCCeeecCCCC---eEEEcccc-c----cCCchhhhhhhh---hc----
Q 022304 175 IYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGE---PVILDPAC-Y----YGHNEAEFGMSW---CA---- 239 (299)
Q Consensus 175 ~~~~~~~~~~~l~~~l~~~~~~~~liHgDl~~~Nvl~~~~~~---~~iID~~~-~----~g~~~~Dla~~~---~~---- 239 (299)
..+...++-+.+..+. ...+|||||...||++.+++. +.+|||.. . --|..+||.++. ..
T Consensus 115 ~~~~~~~iG~~igklH-----~ndiiHGDLTTSNill~~~~~~~~~~lIdfgls~~s~~~EDKgVDLYVlErA~lsTh~~ 189 (229)
T KOG3087|consen 115 LAELARRIGELIGKLH-----DNDIIHGDLTTSNILLRSDGNQITPILIDFGLSSVSRLPEDKGVDLYVLERAVLSTHDK 189 (229)
T ss_pred HHHHHHHHHHHHHHhh-----hCCeecccccccceEEecCCCcCceEEEeecchhcccCcccccceeeeehHhHhccCcc
Confidence 0111222222222222 358999999999999866543 37899852 2 356778887662 11
Q ss_pred --CCChhhHHHhhh
Q 022304 240 --GFGGSFYNSYFE 251 (299)
Q Consensus 240 --~~~~~f~~~Y~~ 251 (299)
..-+.|+++|.+
T Consensus 190 ~~~~fe~~~~~Y~~ 203 (229)
T KOG3087|consen 190 KALLFEGFLEGYRA 203 (229)
T ss_pred cHHHHHHHHHHHHh
Confidence 123688999983
No 60
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=98.92 E-value=2.3e-08 Score=81.99 Aligned_cols=71 Identities=23% Similarity=0.260 Sum_probs=52.8
Q ss_pred eeeCCccccceEEEEeCCc-cEEEEecCCCCc-----------------------------chHHHHHHHHHHHHhcCCC
Q 022304 28 CPVGGGCINLASRYGTDAG-SFFVKTNRSIGP-----------------------------SMFEGEALGLGAMYETRTI 77 (299)
Q Consensus 28 ~~~~~G~~n~~y~v~~~~g-~~vlK~~~~~~~-----------------------------~~~~~E~~~l~~L~~~~~~ 77 (299)
.+++.|..+.||+....+| .+++|+.+.... ...+.|++.+..+... ++
T Consensus 3 ~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~-~i 81 (190)
T cd05145 3 GCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEA-GV 81 (190)
T ss_pred ceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhC-CC
Confidence 4678888899999987645 899998764210 1125688888888765 68
Q ss_pred CCccceeecccCCCceEEEEecccCCC
Q 022304 78 RAPRPFKVGALPTGGSYIIMEFIEFGS 104 (299)
Q Consensus 78 ~vP~~~~~~~~~~~~~~~v~e~l~G~~ 104 (299)
++|.++... ..+++|||++|..
T Consensus 82 ~~p~~~~~~-----~~~lVmE~~~g~~ 103 (190)
T cd05145 82 PVPEPILLK-----KNVLVMEFIGDDG 103 (190)
T ss_pred CCceEEEec-----CCEEEEEEecCCC
Confidence 889988764 2489999999963
No 61
>smart00090 RIO RIO-like kinase.
Probab=98.87 E-value=3.3e-08 Score=83.89 Aligned_cols=95 Identities=18% Similarity=0.127 Sum_probs=66.4
Q ss_pred ccccCCcchHHHHHHhcCCCcceeeeeeeCCccccceEEEE--eCCc-cEEEEecCCCCc--------------------
Q 022304 2 TVAALSDDPIREWILSEGKATHITKICPVGGGCINLASRYG--TDAG-SFFVKTNRSIGP-------------------- 58 (299)
Q Consensus 2 ~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~G~~n~~y~v~--~~~g-~~vlK~~~~~~~-------------------- 58 (299)
|+.+|+-.++..|++.- ....+. ++++.|..+.||+.. ..+| .+++|+.+....
T Consensus 11 ~~~~~~~~~~~~~~~~~-~~~~i~--~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (237)
T smart00090 11 VLDGRTRLALYSLLNRG-ILSAIG--GCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKI 87 (237)
T ss_pred ccChHHHHHHHHHHhcC-chHHhC--CeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCC
Confidence 45566666677777543 223333 578889889999997 3344 888998763210
Q ss_pred -------chHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEecccCCCC
Q 022304 59 -------SMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSS 105 (299)
Q Consensus 59 -------~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~~~ 105 (299)
..++.|+..+..|... ++.+|+++... ..+++||+++|..+
T Consensus 88 ~~~~~~~~~~~~E~~~L~~L~~~-~i~~p~~~~~~-----~~~lV~E~~~g~~L 135 (237)
T smart00090 88 NPRKLVRLWAEKEFRNLQRLYEA-GVPVPKPIAWR-----RNVLVMEFIGGDGL 135 (237)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhc-CCCCCeeeEec-----CceEEEEEecCCcc
Confidence 1246799999999764 68899998753 34899999999755
No 62
>KOG2686 consensus Choline kinase [Cell wall/membrane/envelope biogenesis]
Probab=98.81 E-value=5.2e-08 Score=85.24 Aligned_cols=182 Identities=21% Similarity=0.108 Sum_probs=113.2
Q ss_pred eeeeeeeCCccccceEEEEeCCc---------cEEEEecCCCC-cchHHHHHHHHHHHHhcCCCCCccceeecccCCCce
Q 022304 24 ITKICPVGGGCINLASRYGTDAG---------SFFVKTNRSIG-PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGS 93 (299)
Q Consensus 24 ~~~~~~~~~G~~n~~y~v~~~~g---------~~vlK~~~~~~-~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~ 93 (299)
..+++.+++|..|.+|.++.... ++.+|+++... ......|...+..|+.+ ---|+++..-+.
T Consensus 42 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~k~LlRiyg~~~~~~~~~~Esv~fa~lSer--~lGPkL~G~F~~----- 114 (366)
T KOG2686|consen 42 EQRLEVIPGGGSNLLFVVTSSASTTPIKDEPRKVLLRIYGQGVDFSQRETESVMFAILSER--GLGPKLYGFFSG----- 114 (366)
T ss_pred hheeeeccCCCcceEEEEecCcccCCcccccceeEEEEecCCccHHHhhhHHHHHHHHhhc--CCCcceeeecCC-----
Confidence 35688889899999999886432 48899998642 23456788888899876 256888876432
Q ss_pred EEEEecccCCCCC-------CcHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCCCCHHHHHHHhhhHHHHHHH
Q 022304 94 YIIMEFIEFGSSR-------GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLA 166 (299)
Q Consensus 94 ~~v~e~l~G~~~~-------~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (299)
.-+-+|++.+++. ..-..+|..++++|....+. .. .+ ...|. ++..++...
T Consensus 115 GR~EefipSRtL~~~~i~~p~~S~~Ia~~~~~~H~~~~p~---~k--------e~-----~~~~~------~~~~wl~~~ 172 (366)
T KOG2686|consen 115 GRFEEFIPSRTLTLADIRDPEISKRIAAKLAEYHGIEVPG---PK--------EP-----RSLWE------RYKKWLKGA 172 (366)
T ss_pred ccHhhhccccccchHhhcchhHHHHHHHHHHHhcCCcCCC---Cc--------cH-----HHHHH------HHHHHHhhh
Confidence 4566788877663 34578999999999988641 10 00 01121 122222211
Q ss_pred Hhh---------cCCh-HHHHHHHHHHHHHhccccCCCCCcceeccCCCCCCeeecCCC-CeEEEccc-cccCCchhhhh
Q 022304 167 LDQ---------YGDS-TIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNG-EPVILDPA-CYYGHNEAEFG 234 (299)
Q Consensus 167 ~~~---------~~~~-~~~~~~~~~~~~l~~~l~~~~~~~~liHgDl~~~Nvl~~~~~-~~~iID~~-~~~g~~~~Dla 234 (299)
.+. ..+. ...... ...+.++...+..+.+.++||.|+..||||..+.. ...+|||+ +.+.+..||+|
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~l~-~e~~~~~~~~e~~~~~vvFcHNDlq~gNiL~~~~t~~Lv~IDfEYasyN~r~fDla 251 (366)
T KOG2686|consen 173 KKIKPTEVSYSCGPDKLEIEDLL-LELSLFRKWSELTKSPVVFCHNDLQYGNILLLNSTKELVLIDFEYASYNPRGFDLA 251 (366)
T ss_pred hhcCCCccchhcccchhhHHHHH-HHHHHHHHHHhcCCCCeeeecccccccceeeecCCCceeEEeeccccCCchhhhHH
Confidence 111 0110 001111 11122222221113568999999999999997543 47899985 89999999999
Q ss_pred h
Q 022304 235 M 235 (299)
Q Consensus 235 ~ 235 (299)
+
T Consensus 252 n 252 (366)
T KOG2686|consen 252 N 252 (366)
T ss_pred H
Confidence 6
No 63
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=98.81 E-value=3.5e-08 Score=80.89 Aligned_cols=71 Identities=20% Similarity=0.156 Sum_probs=50.8
Q ss_pred eeCCccccceEEEEeCCc-cEEEEecCCCC---c---------c-----------------hHHHHHHHHHHHHhcCCCC
Q 022304 29 PVGGGCINLASRYGTDAG-SFFVKTNRSIG---P---------S-----------------MFEGEALGLGAMYETRTIR 78 (299)
Q Consensus 29 ~~~~G~~n~~y~v~~~~g-~~vlK~~~~~~---~---------~-----------------~~~~E~~~l~~L~~~~~~~ 78 (299)
.++.|..+.||+....+| .+++|+.+... . . ....|+..+..|... +++
T Consensus 4 ~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~-~v~ 82 (190)
T cd05147 4 CISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTA-GIP 82 (190)
T ss_pred ccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHC-CCC
Confidence 578888899999987655 88999875321 0 1 123489999999765 577
Q ss_pred CccceeecccCCCceEEEEecccCCCC
Q 022304 79 APRPFKVGALPTGGSYIIMEFIEFGSS 105 (299)
Q Consensus 79 vP~~~~~~~~~~~~~~~v~e~l~G~~~ 105 (299)
+|.++... ..+++|||++|..+
T Consensus 83 ~p~~~~~~-----~~~iVmE~i~g~~l 104 (190)
T cd05147 83 CPEPILLK-----SHVLVMEFIGDDGW 104 (190)
T ss_pred CCcEEEec-----CCEEEEEEeCCCCC
Confidence 88777543 33899999999643
No 64
>smart00587 CHK ZnF_C4 abd HLH domain containing kinases domain. subfamily of choline kinases
Probab=98.81 E-value=1.4e-08 Score=83.75 Aligned_cols=58 Identities=22% Similarity=0.417 Sum_probs=44.3
Q ss_pred CCcceeccCCCCCCeeecCCC-----CeEEEccc-cccCCchhhhhhhhhcCCC--------hhhHHHhhhh
Q 022304 195 VEPCLLHGDLWSGNISSDKNG-----EPVILDPA-CYYGHNEAEFGMSWCAGFG--------GSFYNSYFEV 252 (299)
Q Consensus 195 ~~~~liHgDl~~~Nvl~~~~~-----~~~iID~~-~~~g~~~~Dla~~~~~~~~--------~~f~~~Y~~~ 252 (299)
...++||||+|++||++..++ .+.+|||+ +.+|+|++|++.+...... +.+++.|.+.
T Consensus 118 ~~~vl~HgD~~~~N~~~~~~~~~~~~~~~liDfq~~~~g~p~~Dl~~~l~~~~~~~~r~~~~~~ll~~Y~~~ 189 (196)
T smart00587 118 EFNVLNHGDLWANNIMFKYDDEGKPEDVALIDFQLSHYGSPAEDLHYFLLTSLSVEIRREHFDELLKFYYET 189 (196)
T ss_pred CceEEeeCCCCccceeeccCCCCCccceEEEecccCCcCChHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHH
Confidence 367999999999999997543 36899995 7899999999976432221 4677777754
No 65
>PRK14705 glycogen branching enzyme; Provisional
Probab=98.80 E-value=2.7e-07 Score=93.34 Aligned_cols=250 Identities=16% Similarity=0.063 Sum_probs=137.8
Q ss_pred eeeCCccccceEEEEeCCccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCCccceeeccc--------CCC-------c
Q 022304 28 CPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGAL--------PTG-------G 92 (299)
Q Consensus 28 ~~~~~G~~n~~y~v~~~~g~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~--------~~~-------~ 92 (299)
..+++-++|....+...+.++|+|+++.-... ..=|+++.++|.+.+--.||.++..-.. ..+ .
T Consensus 150 r~l~~EQSNTSvi~gd~~~~~ilKlfRrl~~G-~NPdvE~~r~Lteag~~~vP~llG~ve~~~~~~~~~~~~~~~~~~~t 228 (1224)
T PRK14705 150 KVLSGEQSNTSVIVDDGDSAAIVKFFRVLSAG-KNPEVELGAALTAAGTSEVPATLGWVTGEWDGPASNAGATARAVTGE 228 (1224)
T ss_pred cccccccCceEEEECCCCccEEEEEeeecCCC-CCccHHHHHHHhhCCCccCCCccEEEEEeecccccccCCccccCcee
Confidence 44555567776666432238999999852211 1235777888987543469999876322 111 2
Q ss_pred eEEEEecccCCCCC---------------CcHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCCCCHHHHHHHh
Q 022304 93 SYIIMEFIEFGSSR---------------GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEH 157 (299)
Q Consensus 93 ~~~v~e~l~G~~~~---------------~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 157 (299)
-.++.+|+++..-. ..++.||+.+|.||.+.+.. ++- +.+. ....+ .. .
T Consensus 229 La~lq~fv~n~gDgW~~tl~~l~r~~~f~~~a~~LG~rtAemH~aLA~~--~~~--~~f~--------~~~~~---~~-~ 292 (1224)
T PRK14705 229 LAVAHEFLAGGLDAWRLAVDAAASGKDFTAEARALGAATATVHRRLAET--LGT--HDGQ--------EQGPD---IA-A 292 (1224)
T ss_pred HHHHHHhhcCCchHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhcC--CCC--cccc--------cCHHH---HH-H
Confidence 36778999875420 23678999999999988742 111 1000 00000 00 0
Q ss_pred hhHHHHHHHHhhcCChHHHHHHHHHHHHHhccccCCCCCcceeccCCCCCCeeecCCC-----CeEEEccc--c------
Q 022304 158 RLGYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNG-----EPVILDPA--C------ 224 (299)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~liHgDl~~~Nvl~~~~~-----~~~iID~~--~------ 224 (299)
.+...++..... .++.+...-.++.+++..+.........-||||||.|.||+.++. ...||||+ +
T Consensus 293 ~~~~rL~~~~~~-~~~~~~~~~~~l~~~~~~l~~~~~~~~~RIHGD~HLGQVL~t~~D~~~~~~~~IIDFEGEP~RpL~E 371 (1224)
T PRK14705 293 GVARRVRGSWAE-AGPAVGPYDHALDELLSALDGRNAGQLQRIHGDLHLGQILQVPGAEGQPERWAILDFEGEPLRPIDE 371 (1224)
T ss_pred HHHHHHHHHHhh-CCHHHHHHHHHHHHHHHHHhccCccceEEEecccccccEEEecCCCCccCCEEEEecCCCCCCChhh
Confidence 111112111111 122222222233333333322112356889999999999997432 26899974 2
Q ss_pred --ccCCchhhhh-hh-hh--c------C---------C----ChhhHHHhhhhCC-CCCCHHHHHHHHHHHHHH---HHH
Q 022304 225 --YYGHNEAEFG-MS-WC--A------G---------F----GGSFYNSYFEVMP-KQPGFEKRRDLYMLYHYL---NHY 275 (299)
Q Consensus 225 --~~g~~~~Dla-~~-~~--~------~---------~----~~~f~~~Y~~~~~-l~~~~~~r~~~~~l~~~l---~~~ 275 (299)
.--.|..|+| |+ ++ . . | ..+|+++|.+..+ ..+.....+..|.+-.++ ..-
T Consensus 372 RR~k~sPLRDVAGMLRSFdYAa~~~l~~~~~~~~a~~W~~~~~~aFL~gY~~~~~g~~~~~~~LL~aflLeKAvYEv~YE 451 (1224)
T PRK14705 372 RNSPDVPLRDVTGMLRSFDYAAGAATRENEGAHVPESWVDDCAAAFLAGYSEVTPGTIDRRSPLFVALWLDKALYEVVYE 451 (1224)
T ss_pred hccCCChHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHH
Confidence 2367899998 44 22 0 0 1 1369999998763 223222334455544443 222
Q ss_pred HhhCcccHHHHHHHHHHHHH
Q 022304 276 NLFGSGYRSSALSIIDDYLR 295 (299)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~ 295 (299)
....++|.....+.+.+++.
T Consensus 452 ~~nRP~Wv~IPL~gi~rll~ 471 (1224)
T PRK14705 452 LRNRPDWLSIPVNASRRLLD 471 (1224)
T ss_pred HHcCCcchHhHHHHHHHHHh
Confidence 33468999999999988874
No 66
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=98.80 E-value=8.6e-08 Score=80.04 Aligned_cols=142 Identities=25% Similarity=0.278 Sum_probs=91.1
Q ss_pred ceeee-eeeCCccccceEEEEeCCc-cEEEEecCCCC---------------------------cchHHHHHHHHHHHHh
Q 022304 23 HITKI-CPVGGGCINLASRYGTDAG-SFFVKTNRSIG---------------------------PSMFEGEALGLGAMYE 73 (299)
Q Consensus 23 ~~~~~-~~~~~G~~n~~y~v~~~~g-~~vlK~~~~~~---------------------------~~~~~~E~~~l~~L~~ 73 (299)
.+..+ -.++.|-...||...+.++ .+.+|++...+ ....++|+.-|..+.+
T Consensus 48 ~i~~~~g~istGKEA~Vy~a~~~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~e 127 (268)
T COG1718 48 VITELVGCISTGKEANVYLAETGDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYE 127 (268)
T ss_pred ceeeeEeeecCCcceEEEeeccCCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 44443 4677888889999887655 77889885310 0234689999998988
Q ss_pred cCCCCCccceeecccCCCceEEEEecccCCCCCCcHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCCCCHHHH
Q 022304 74 TRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEF 153 (299)
Q Consensus 74 ~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 153 (299)
. |++||+|+..- ...++|||+..... ++ |.... .+ . ..
T Consensus 128 A-GVrvP~Pi~~~-----~nVLvMEfIg~~g~-----------------pA---------P~LkD-v~----~-e~---- 165 (268)
T COG1718 128 A-GVRVPEPIAFR-----NNVLVMEFIGDDGL-----------------PA---------PRLKD-VP----L-EL---- 165 (268)
T ss_pred c-CCCCCCceeec-----CCeEEEEeccCCCC-----------------CC---------CCccc-CC----c-Cc----
Confidence 6 79999999886 34999999977521 11 10000 00 0 00
Q ss_pred HHHhhhHHHHHHHHhhcCChHHHHHHHHHHHHHhccccCCCCCcceeccCCCCCCeeecCCCCeEEEcc-ccc-cCCch
Q 022304 154 YAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDP-ACY-YGHNE 230 (299)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~liHgDl~~~Nvl~~~~~~~~iID~-~~~-~g~~~ 230 (299)
+ ......+.+++.+..++. ...|+||||..-|||+. ++.++|||+ .+. ..+|.
T Consensus 166 ------~-------------e~~~~~~~~v~~~~~l~~----~a~LVHgDLSEyNiL~~-~~~p~iID~~QaV~~~hp~ 220 (268)
T COG1718 166 ------E-------------EAEGLYEDVVEYMRRLYK----EAGLVHGDLSEYNILVH-DGEPYIIDVSQAVTIDHPN 220 (268)
T ss_pred ------h-------------hHHHHHHHHHHHHHHHHH----hcCcccccchhhheEEE-CCeEEEEECccccccCCCc
Confidence 0 001122334444444443 47899999999999998 556999997 564 56654
No 67
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=98.77 E-value=2.2e-07 Score=76.71 Aligned_cols=93 Identities=14% Similarity=0.032 Sum_probs=54.1
Q ss_pred HHHHHHhcCCCcceeeeeeeCCccccceEEEEeCCccEEEEecCCCCc------------chHHHHHHHHHHHHhcCCCC
Q 022304 11 IREWILSEGKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRSIGP------------SMFEGEALGLGAMYETRTIR 78 (299)
Q Consensus 11 i~~~l~~~~~~~~~~~~~~~~~G~~n~~y~v~~~~g~~vlK~~~~~~~------------~~~~~E~~~l~~L~~~~~~~ 78 (299)
-.+++... ...+..-++-+.+..-|.|.+|+++++.||+|.+++..+ ....++...+..+.+. |+.
T Consensus 21 y~~l~~~i-~~~~~~~~kv~k~~~r~~ValIei~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~-g~~ 98 (229)
T PF06176_consen 21 YLELGEKI-LDNNYKIIKVFKNTKRNYVALIEIDGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNE-GFT 98 (229)
T ss_pred HHHHHHHH-HhCCceEEEeecCCCccEEEEEEECCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHc-Ccc
Confidence 33444444 333444444555555678999999999999999986321 1223444444455444 565
Q ss_pred Cccce-eecccC----CCceEEEEecccCCCC
Q 022304 79 APRPF-KVGALP----TGGSYIIMEFIEFGSS 105 (299)
Q Consensus 79 vP~~~-~~~~~~----~~~~~~v~e~l~G~~~ 105 (299)
.|..+ ....-. ....+++|||++|.++
T Consensus 99 ~~~~~yl~~ekk~~~~~~~~~ll~EYIeG~~l 130 (229)
T PF06176_consen 99 EPADPYLAAEKKIFRYTSSYVLLMEYIEGVEL 130 (229)
T ss_pred ccccceeeeeeeeccceeEEEEEEEEecCeec
Confidence 55442 222111 2345689999999866
No 68
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.75 E-value=6.3e-08 Score=80.45 Aligned_cols=119 Identities=20% Similarity=0.224 Sum_probs=74.2
Q ss_pred cchHHHHHHHHHHHHhcCCCCCccceeecccCC---CceEEEEecccCCCCCCcHHHHHHHHHHHHhcCCCCCCCCCCCC
Q 022304 58 PSMFEGEALGLGAMYETRTIRAPRPFKVGALPT---GGSYIIMEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVD 134 (299)
Q Consensus 58 ~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~---~~~~~v~e~l~G~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~ 134 (299)
.....+|...+..|.+. |+|+|+|++++.... ...++++++++|.. .+...+...+....
T Consensus 55 ~~ra~~E~~~~~~L~~~-Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~------~L~~~~~~~~~~~~---------- 117 (206)
T PF06293_consen 55 RSRAKREWRNLQRLREA-GIPTPEPVAYGERRKGGGYRSYLITEALPGAQ------DLRDLLQQWEQLDP---------- 117 (206)
T ss_pred chHHHHHHHHHHHHHHc-CCCCCcEEEEEEEcCCCceeEEEEEEeCCCcc------cHHHHHHhhcccch----------
Confidence 34578899999999986 899999999876532 24689999999842 23333333322110
Q ss_pred CcccccccCCCCCCCHHHHHHHhhhHHHHHHHHhhcCChHHHHHHHHHHHHHhccccCCCCCcceeccCCCCCCeeecCC
Q 022304 135 NTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKN 214 (299)
Q Consensus 135 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~liHgDl~~~Nvl~~~~ 214 (299)
... .. +...+.+++.+ +. ..+++|||++++|||++++
T Consensus 118 --------------~~~--------~~-------------ll~~l~~~i~~---lH-----~~gi~H~Dl~~~NILv~~~ 154 (206)
T PF06293_consen 118 --------------SQR--------RE-------------LLRALARLIAK---LH-----DAGIYHGDLNPSNILVDPD 154 (206)
T ss_pred --------------hhH--------HH-------------HHHHHHHHHHH---HH-----HCcCCCCCCCcccEEEeCC
Confidence 000 00 01112222222 22 4699999999999999877
Q ss_pred C---CeEEEccc-cccCC-----chhhhhhh
Q 022304 215 G---EPVILDPA-CYYGH-----NEAEFGMS 236 (299)
Q Consensus 215 ~---~~~iID~~-~~~g~-----~~~Dla~~ 236 (299)
+ ...+||++ +.... ...||+.+
T Consensus 155 ~~~~~~~lIDld~~~~~~~~~~~~~~dL~~L 185 (206)
T PF06293_consen 155 DGQYRFYLIDLDRMRFRPSSRRWRAKDLARL 185 (206)
T ss_pred CCceeEEEEcchhceeCCCChHHHHHhHHHH
Confidence 5 47899986 33333 35666655
No 69
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=98.72 E-value=1.7e-07 Score=77.37 Aligned_cols=73 Identities=21% Similarity=0.163 Sum_probs=52.8
Q ss_pred eeeeCCccccceEEEEeCCc-cEEEEecCCCC-------------------------cchHHHHHHHHHHHHhcCCCCCc
Q 022304 27 ICPVGGGCINLASRYGTDAG-SFFVKTNRSIG-------------------------PSMFEGEALGLGAMYETRTIRAP 80 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~~~g-~~vlK~~~~~~-------------------------~~~~~~E~~~l~~L~~~~~~~vP 80 (299)
.++++.|..+.+|+....+| .+.+|+.+... ......|...+..+... ++++|
T Consensus 20 ~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~-~i~v~ 98 (198)
T cd05144 20 GNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEE-GFPVP 98 (198)
T ss_pred CCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHc-CCCCC
Confidence 36788888899999987555 88999754211 01245688888888664 47889
Q ss_pred cceeecccCCCceEEEEecccCCCC
Q 022304 81 RPFKVGALPTGGSYIIMEFIEFGSS 105 (299)
Q Consensus 81 ~~~~~~~~~~~~~~~v~e~l~G~~~ 105 (299)
.++..+ ..+++|||++|.++
T Consensus 99 ~~~~~~-----~~~lv~e~~~g~~L 118 (198)
T cd05144 99 KPIDWN-----RHAVVMEYIDGVEL 118 (198)
T ss_pred ceeecC-----CceEEEEEeCCcch
Confidence 888643 45999999999654
No 70
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=98.70 E-value=5.6e-08 Score=91.24 Aligned_cols=99 Identities=15% Similarity=0.070 Sum_probs=69.1
Q ss_pred cccCCcchHHHHHHhcCCCccee------eeeeeCCccccceEEEEeCC-c-cEEEEecCCCCc----------------
Q 022304 3 VAALSDDPIREWILSEGKATHIT------KICPVGGGCINLASRYGTDA-G-SFFVKTNRSIGP---------------- 58 (299)
Q Consensus 3 ~~~~~~~~i~~~l~~~~~~~~~~------~~~~~~~G~~n~~y~v~~~~-g-~~vlK~~~~~~~---------------- 58 (299)
|..++.+++.+.+.+. +|.++. +.+|++.|....||+.+..+ | .++||+-++.-.
T Consensus 95 vpp~~~~~~~~~ie~e-lG~~~~~~F~~fd~~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~ 173 (537)
T PRK04750 95 VPPFDGALARAIIEKA-LGGPVEEWFDDFDIKPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARW 173 (537)
T ss_pred CCCCCHHHHHHHHHHH-hCCCHHHHHHhcChhhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHH
Confidence 5678888999999877 443222 24789999899999999865 5 899998865310
Q ss_pred ---------------------------chHHHHHHHHHHHHh----cCCCCCccceeecccCCCceEEEEecccCCCC
Q 022304 59 ---------------------------SMFEGEALGLGAMYE----TRTIRAPRPFKVGALPTGGSYIIMEFIEFGSS 105 (299)
Q Consensus 59 ---------------------------~~~~~E~~~l~~L~~----~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~~~ 105 (299)
-.+..|++.+..+++ ...+.||++|..- .+..+++|||++|.++
T Consensus 174 l~~~~~~~~~l~~~~~v~e~~~~l~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~---st~~VLvmE~i~G~~l 248 (537)
T PRK04750 174 VERLLPDGRRLKPREVVAEFEKTLHDELDLMREAANASQLRRNFEDSDMLYVPEVYWDY---CSETVMVMERMYGIPV 248 (537)
T ss_pred HHHhCcccccCCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHccCCCCeecceeeccc---CCCceEEEeeecCccH
Confidence 113445555555543 2347899999754 2578999999999865
No 71
>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]
Probab=98.69 E-value=2.4e-08 Score=86.21 Aligned_cols=137 Identities=22% Similarity=0.286 Sum_probs=93.8
Q ss_pred eeee-eeeCCccccceEEEEeCCc-cEEEEecCCC-------------------------CcchHHHHHHHHHHHHhcCC
Q 022304 24 ITKI-CPVGGGCINLASRYGTDAG-SFFVKTNRSI-------------------------GPSMFEGEALGLGAMYETRT 76 (299)
Q Consensus 24 ~~~~-~~~~~G~~n~~y~v~~~~g-~~vlK~~~~~-------------------------~~~~~~~E~~~l~~L~~~~~ 76 (299)
+.++ ..+|-|-.+.+|.+...+| .+++|+.+-. ++-...+|.++++.|.++ +
T Consensus 93 v~svGnqIGVGKESDIY~v~d~~G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~kEfafmkaL~e~-g 171 (465)
T KOG2268|consen 93 VESVGNQIGVGKESDIYVVADEEGNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAATKEFAFMKALYER-G 171 (465)
T ss_pred hhhhccccccccccceEEEecCCCCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHHHHHHHHHHHHHc-C
Confidence 3344 5677888899999988766 8899977421 112235799999999998 7
Q ss_pred CCCccceeecccCCCceEEEEecccCCCCCCcHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCCCCHHHHHHH
Q 022304 77 IRAPRPFKVGALPTGGSYIIMEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAE 156 (299)
Q Consensus 77 ~~vP~~~~~~~~~~~~~~~v~e~l~G~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 156 (299)
+|||+|+.++ +++++|+.++|-|+. ++|.+..+ .
T Consensus 172 fpVPkpiD~~-----RH~Vvmelv~g~Pl~-----------~v~~v~d~-------------------------~----- 205 (465)
T KOG2268|consen 172 FPVPKPIDHN-----RHCVVMELVDGYPLR-----------QVRHVEDP-------------------------P----- 205 (465)
T ss_pred CCCCCccccc-----ceeeHHHhhccccee-----------eeeecCCh-------------------------H-----
Confidence 9999999886 569999999998663 22322211 0
Q ss_pred hhhHHHHHHHHhhcCChHHHHHHHHHHHHHhccccCCCCCcceeccCCCCCCeeecCCCCeEEEcc-cc-ccCCchhh
Q 022304 157 HRLGYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDP-AC-YYGHNEAE 232 (299)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~liHgDl~~~Nvl~~~~~~~~iID~-~~-~~g~~~~D 232 (299)
.+.+.+..++-++. ..++|||||.-=|||+++++.+.+||| .+ ...+|-.+
T Consensus 206 -----------------~ly~~lm~~Iv~la--------~~GlIHgDFNEFNimv~dd~~i~vIDFPQmvS~sh~nA~ 258 (465)
T KOG2268|consen 206 -----------------TLYDDLMGLIVRLA--------NHGLIHGDFNEFNIMVKDDDKIVVIDFPQMVSTSHPNAE 258 (465)
T ss_pred -----------------HHHHHHHHHHHHHH--------HcCceecccchheeEEecCCCEEEeechHhhccCCCccc
Confidence 01112222222221 369999999999999987777999995 55 35555443
No 72
>PRK12274 serine/threonine protein kinase; Provisional
Probab=98.68 E-value=2.2e-07 Score=76.51 Aligned_cols=72 Identities=14% Similarity=0.077 Sum_probs=51.9
Q ss_pred eeeeCCccccceEEEEeCCccEEEEecCCCC-------cchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEec
Q 022304 27 ICPVGGGCINLASRYGTDAGSFFVKTNRSIG-------PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 99 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~~~g~~vlK~~~~~~-------~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~ 99 (299)
.+.++.|..+.||.+..++.+++.|-..... ...+++|+++|+.|... ..+|+++... ..+++|+|
T Consensus 7 ~~~l~~~~f~~v~~~~~~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~--~~vP~ll~~~-----~~~lvmey 79 (218)
T PRK12274 7 NEPLKSDTFGRILLVRGGERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGL--PRTPRLLHWD-----GRHLDRSY 79 (218)
T ss_pred ceeecCCCcceEEEeecCCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCC--CCCCEEEEEc-----CEEEEEee
Confidence 4567777889999888766687755443221 12467899999999653 5689998863 46999999
Q ss_pred ccCCCC
Q 022304 100 IEFGSS 105 (299)
Q Consensus 100 l~G~~~ 105 (299)
++|..+
T Consensus 80 I~G~~L 85 (218)
T PRK12274 80 LAGAAM 85 (218)
T ss_pred ecCccH
Confidence 998743
No 73
>TIGR02569 TIGR02569_actnb conserved hypothetical protein TIGR02569, Actinobacterial. This protein family is found, so far, only in Actinobacteria, including as least five species of Mycobacterium, three of Corynebacterium, and Nocardia farcinica, always in a single copy per genome. The function is unknown.
Probab=98.66 E-value=1.4e-06 Score=72.77 Aligned_cols=219 Identities=12% Similarity=0.149 Sum_probs=125.3
Q ss_pred eeeeeCCccccceEEEEeCCccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCCccceeecccC-CCceEEEEecccCCC
Q 022304 26 KICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALP-TGGSYIIMEFIEFGS 104 (299)
Q Consensus 26 ~~~~~~~G~~n~~y~v~~~~g~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~-~~~~~~v~e~l~G~~ 104 (299)
+-+++++|+ ..-||+ |..|+|......+. .--..+.+.|.- .++.+.+|+...+.. .-..|-.-+|++|.+
T Consensus 17 ~p~~Lg~~w-~~gwr~----G~vVls~v~~~~~A--aWsAkvre~L~~-~GvRvaRPvrstDGRyVv~GWrA~~fv~G~~ 88 (272)
T TIGR02569 17 PPIQLGAAW-DGGWRV----GNVVFSMVADPARS--AWSARVRETLFP-DGVRVVRPVRSTDGRYVVAGWRADTFVAGTP 88 (272)
T ss_pred CcccCCCCC-CCcEEe----ccEEEeccCCchhh--hhhHHhhhhccC-CCeeEecceecCCCCeEecceeeccccCCCc
Confidence 344576554 566898 78899875432111 122333344443 378889999775432 234577889999984
Q ss_pred CCCcHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCCCCHHHHHH-HhhhHHHHHH------HHhhcCChHHHH
Q 022304 105 SRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYA-EHRLGYQLKL------ALDQYGDSTIYQ 177 (299)
Q Consensus 105 ~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~------~~~~~~~~~~~~ 177 (299)
...+.++..+--+||..... .+.|.+.. .|.. .+.|. ..+....... ....-......+
T Consensus 89 -~~R~DEvv~aalrlh~Ala~-----~~~P~fl~------~~~~--~d~fa~ADraAW~e~p~~~~~~~~~~~~~~~~~~ 154 (272)
T TIGR02569 89 -EPRVDETVVAALRLHEALGD-----LERPGPAA------PWAE--IDVFVAADRAAWEERPLQSVPPGVPTAPPAADPQ 154 (272)
T ss_pred -CcchHHHHHHHHHHHHHHhc-----CCCCcccc------ccch--hhHHHHHHHHHhhcccccccccccccccccchhh
Confidence 46778888888899998863 22222211 1211 12221 2222110000 000000001122
Q ss_pred HHHHHHHHHhccccCCCCCcceeccCCCCCCeeecCCCCeEEEccccccCCchhhhhhh----hh-cCCChhhHHHhhhh
Q 022304 178 RGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFGMS----WC-AGFGGSFYNSYFEV 252 (299)
Q Consensus 178 ~~~~~~~~l~~~l~~~~~~~~liHgDl~~~Nvl~~~~~~~~iID~~~~~g~~~~Dla~~----~~-~~~~~~f~~~Y~~~ 252 (299)
...+++.++.++......+..++|||+ .+|+||+++..++|||.-..+-+..|=-+.. +. ++.++++++.+...
T Consensus 155 ~~~~l~~~l~~lrrpv~~p~QlvHgDl-~gt~lF~g~~~P~itDi~pywRP~~waaAvvvVDal~wg~ad~~ll~rw~h~ 233 (272)
T TIGR02569 155 RSIDLINQIAGLLKPIKSPNQVVHADM-YATTLYAGTQPPGVTDLVPVWRPAGWTAAVAIVDALLWGAVDEGIIERFSHL 233 (272)
T ss_pred HHHHHHHHHHHHhcccCCCcceeeeec-ccceeecCCCCCceeecccccCcchhhhHHHHHHHHHhcCCCHHHHHHhccC
Confidence 233455555555555457889999999 7899999887789999876777777766653 22 67788999996543
Q ss_pred CCCCCCHHHHHHHHHH
Q 022304 253 MPKQPGFEKRRDLYML 268 (299)
Q Consensus 253 ~~l~~~~~~r~~~~~l 268 (299)
|--+.+..|..+|++
T Consensus 234 -p~~~QlllRAllfRl 248 (272)
T TIGR02569 234 -PEWPQLLLRALMFRL 248 (272)
T ss_pred -cchHHHHHHHHHHHH
Confidence 322334556666644
No 74
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=98.62 E-value=5.6e-07 Score=73.28 Aligned_cols=70 Identities=26% Similarity=0.325 Sum_probs=50.6
Q ss_pred eeCCccccceEEEEeCCc-cEEEEecCCCC------cch---------------------HHHHHHHHHHHHhcCCCCCc
Q 022304 29 PVGGGCINLASRYGTDAG-SFFVKTNRSIG------PSM---------------------FEGEALGLGAMYETRTIRAP 80 (299)
Q Consensus 29 ~~~~G~~n~~y~v~~~~g-~~vlK~~~~~~------~~~---------------------~~~E~~~l~~L~~~~~~~vP 80 (299)
.++.|..+.+|++...++ .+++|+..+.. ... ...|...+..+... ++.+|
T Consensus 4 ~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~-~~~~~ 82 (187)
T cd05119 4 PIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEA-GVPVP 82 (187)
T ss_pred ccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHc-CCCCC
Confidence 577788889999887644 89999865421 011 14577777777765 68899
Q ss_pred cceeecccCCCceEEEEecccCCC
Q 022304 81 RPFKVGALPTGGSYIIMEFIEFGS 104 (299)
Q Consensus 81 ~~~~~~~~~~~~~~~v~e~l~G~~ 104 (299)
+++... ..+++|+|++|..
T Consensus 83 ~~~~~~-----~~~lv~e~~~g~~ 101 (187)
T cd05119 83 KPIDLN-----RHVLVMEFIGGDG 101 (187)
T ss_pred ceEecC-----CCEEEEEEeCCCC
Confidence 999764 3599999999964
No 75
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.61 E-value=1.1e-07 Score=88.66 Aligned_cols=100 Identities=19% Similarity=0.146 Sum_probs=71.8
Q ss_pred cccCCcchHHHHHHhcCCCccee----e--eeeeCCccccceEEEEeCCc-cEEEEecCCCCc-----------------
Q 022304 3 VAALSDDPIREWILSEGKATHIT----K--ICPVGGGCINLASRYGTDAG-SFFVKTNRSIGP----------------- 58 (299)
Q Consensus 3 ~~~~~~~~i~~~l~~~~~~~~~~----~--~~~~~~G~~n~~y~v~~~~g-~~vlK~~~~~~~----------------- 58 (299)
|..+..+++.+.+.+. +|..+. + -+|++.+...+||+.+..+| .++||+-+++-+
T Consensus 101 vpp~~~~~~~~iie~e-LG~~iee~F~eF~~~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~ 179 (517)
T COG0661 101 VPPFPFEEAERIIEEE-LGRPIEELFSEFEPEPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLI 179 (517)
T ss_pred CCCCCHHHHHHHHHHH-hCCCHHHHHHHcCCCchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHH
Confidence 5677888999999888 554443 2 36777777889999999876 899998876300
Q ss_pred --------------------------chHHHHHHHHHHHHhc----CCCCCccceeecccCCCceEEEEecccCCCCC
Q 022304 59 --------------------------SMFEGEALGLGAMYET----RTIRAPRPFKVGALPTGGSYIIMEFIEFGSSR 106 (299)
Q Consensus 59 --------------------------~~~~~E~~~l~~L~~~----~~~~vP~~~~~~~~~~~~~~~v~e~l~G~~~~ 106 (299)
-.+..|+..++.+++. ..+.||+|+..- .+...++|||++|.+..
T Consensus 180 ~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~~EA~n~~~~~~nf~~~~~v~VP~V~we~---t~~~VLtmE~i~Gi~i~ 254 (517)
T COG0661 180 KRLPPGGRRLDLVEVVDEFEKRLREELDYRREAANAERFRENFKDDPDVYVPKVYWEY---TTRRVLTMEWIDGIKIS 254 (517)
T ss_pred HHcCCccccCChHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHcCCCCCeEeceeehhc---cCCcEEEEEeeCCEecc
Confidence 1134666666666542 457899999754 25779999999998663
No 76
>COG3570 StrB Streptomycin 6-kinase [Defense mechanisms]
Probab=98.56 E-value=5.5e-07 Score=72.73 Aligned_cols=165 Identities=21% Similarity=0.204 Sum_probs=94.8
Q ss_pred cccceEEEEeCCccEEEE----ecCCCCcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEecccCCCCC---
Q 022304 34 CINLASRYGTDAGSFFVK----TNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSR--- 106 (299)
Q Consensus 34 ~~n~~y~v~~~~g~~vlK----~~~~~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~~~~--- 106 (299)
.++.+|.|+..+|+-++| +.... +. .+=..++.|.. |.-+.+++..+ ...++||+..|+.+.
T Consensus 24 ~ssrllpv~~~ggsa~~~amlk~~~~~--ee-rrG~~ll~ww~---G~Gaarvla~d-----~~alLlEra~~~rsl~~l 92 (274)
T COG3570 24 HSSRLLPVRRRGGSAIAKAMLKKADLE--EE-RRGADLLAWWD---GIGAARVLAQD-----DNALLLERAGGERSLDVL 92 (274)
T ss_pred cccceEEEEecCchhHHHHHhhhccch--Hh-hccchhhhhhh---cCCcchhhccC-----ccHHHHHhccccchHHHH
Confidence 457788898877654443 33221 10 12234556665 45567788775 448999999987651
Q ss_pred ------Cc-HHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCCCCHHHHHHHhhhHHHHHHHHhhcCChHHHHHH
Q 022304 107 ------GN-QSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRG 179 (299)
Q Consensus 107 ------~~-~~~lg~~La~lH~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (299)
+. -+-+.+.++++|+-..+++ .+ .. +...|.+.+- ..... +....-..
T Consensus 93 ~~~G~Dd~aTrIac~a~~rlh~Prp~pp-p~--------L~-----pL~~wf~sLf--------~~a~~---d~~i~v~a 147 (274)
T COG3570 93 VRDGNDDAATRIACEALARLHAPRPSPP-PE--------LL-----PLERWFESLF--------RKARQ---DGSIYVEA 147 (274)
T ss_pred HHhCCchHHHHHHHHHHHHhhCCCCCCC-cc--------cc-----cHHHHHHHHH--------HHHhh---cCCcchhH
Confidence 12 2456788999998743211 11 11 1123322111 11111 10011111
Q ss_pred HHHHHHHhccccCCCCCcceeccCCCCCCeeecCCCCeEEEccccccCCchhhhhhhhh
Q 022304 180 HRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFGMSWC 238 (299)
Q Consensus 180 ~~~~~~l~~~l~~~~~~~~liHgDl~~~Nvl~~~~~~~~iID~~~~~g~~~~Dla~~~~ 238 (299)
.++.+ .++.. +...+.+|||+|.+|||=.+.+.-.+||+...+|++.||.+.+.+
T Consensus 148 A~~A~---~LL~~-p~di~pLHGDlHH~Nild~~~rGWlvIDPkgl~Gdrg~D~ANlf~ 202 (274)
T COG3570 148 ARAAQ---TLLDT-PRDIRPLHGDLHHGNILDGDRRGWLVIDPKGLIGDRGFDYANLFC 202 (274)
T ss_pred HHHHH---HHhcC-ccccccCcccccccccccCCcCceEEEccccccCccccchHhhhc
Confidence 12222 23333 467789999999999996554335689999999999999998754
No 77
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=98.49 E-value=7.4e-07 Score=81.29 Aligned_cols=133 Identities=20% Similarity=0.245 Sum_probs=88.5
Q ss_pred eeeCCccccceEEEEeCC--ccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEec
Q 022304 28 CPVGGGCINLASRYGTDA--GSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 99 (299)
Q Consensus 28 ~~~~~G~~n~~y~v~~~~--g~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~ 99 (299)
+.+|.|..+.|++.+..+ ..|.+|+-... --..+.+|-.+|..|+.+. -+-+++.+-.+ +..-|+|+++
T Consensus 79 ~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hP--givkLy~TFQD-~~sLYFvLe~ 155 (604)
T KOG0592|consen 79 KILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHP--GIVKLYFTFQD-EESLYFVLEY 155 (604)
T ss_pred heeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCC--CeEEEEEEeec-ccceEEEEEe
Confidence 567899999999987632 37888876431 1245678999999998652 34566654332 5688999999
Q ss_pred ccCCCCCCcHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCCCCHHHHHHHhhhHHHHHHHHhhcCChHHHHHH
Q 022304 100 IEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRG 179 (299)
Q Consensus 100 l~G~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (299)
.+++ +.|.-|++... | .+.|..||..
T Consensus 156 A~nG----------dll~~i~K~Gs----f-----------------de~caR~YAA----------------------- 181 (604)
T KOG0592|consen 156 APNG----------DLLDLIKKYGS----F-----------------DETCARFYAA----------------------- 181 (604)
T ss_pred cCCC----------cHHHHHHHhCc----c-----------------hHHHHHHHHH-----------------------
Confidence 9986 33444555442 1 1234444432
Q ss_pred HHHHHHHhccccCCCCCcceeccCCCCCCeeecCCCCeEEEccc
Q 022304 180 HRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA 223 (299)
Q Consensus 180 ~~~~~~l~~~l~~~~~~~~liHgDl~~~Nvl~~~~~~~~iID~~ 223 (299)
+++..+. ++. ..++||+|++|+|||+|+|+.+.|-||.
T Consensus 182 -eIldAle-ylH----~~GIIHRDlKPENILLd~dmhikITDFG 219 (604)
T KOG0592|consen 182 -EILDALE-YLH----SNGIIHRDLKPENILLDKDGHIKITDFG 219 (604)
T ss_pred -HHHHHHH-HHH----hcCceeccCChhheeEcCCCcEEEeecc
Confidence 1222222 222 4699999999999999999988999975
No 78
>COG2187 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.49 E-value=4.3e-07 Score=76.75 Aligned_cols=95 Identities=21% Similarity=0.218 Sum_probs=67.5
Q ss_pred HHHHHHHhccccCC--CCCcceeccCCCCCCeeecCCCCeEEEc---c-cc-ccCCchhhhhhhhh----cCCC---hhh
Q 022304 180 HRLMKNLAPLFEGV--NVEPCLLHGDLWSGNISSDKNGEPVILD---P-AC-YYGHNEAEFGMSWC----AGFG---GSF 245 (299)
Q Consensus 180 ~~~~~~l~~~l~~~--~~~~~liHgDl~~~Nvl~~~~~~~~iID---~-~~-~~g~~~~Dla~~~~----~~~~---~~f 245 (299)
++..++...++... ..-.+=||||+|.+||.+- ++++.++| | +. .+.|..+|+|++.. .+.+ ..|
T Consensus 190 ~~f~e~~~~lf~~R~~~g~IRecHGDLhl~ni~l~-dg~~~LFDCIEFNd~fr~iDv~~D~AFl~MDLe~~gr~dla~~~ 268 (337)
T COG2187 190 EEFLERHGPLFDRRIAEGFIRECHGDLHLRNICLW-DGEPALFDCIEFNDPFRFIDVLYDLAFLAMDLEFRGRKDLARRF 268 (337)
T ss_pred HHHHHhhhHHHHHHHhcCCceecccchhhcceeee-cCcceEEEEeecCCcchHHHHHHHHHHHHhhHhhcCChHHHHHH
Confidence 34444444454432 2345789999999999985 45699999 5 35 49999999998632 3333 589
Q ss_pred HHHhhhhCCCCCCHHHHHHHHHHHHHHHHHH
Q 022304 246 YNSYFEVMPKQPGFEKRRDLYMLYHYLNHYN 276 (299)
Q Consensus 246 ~~~Y~~~~~l~~~~~~r~~~~~l~~~l~~~~ 276 (299)
++.|.+..+= .+..+-+++|.-+++.+++-
T Consensus 269 ln~Yl~~tgD-~~gl~lLpfyla~rA~VRak 298 (337)
T COG2187 269 LNTYLEETGD-WDGLELLPFYLAYRAYVRAK 298 (337)
T ss_pred HHHHHHHhCC-ccHHHHhHHHHHHHHHHHHh
Confidence 9999988642 33367899999988888874
No 79
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=98.46 E-value=2.3e-06 Score=69.85 Aligned_cols=71 Identities=17% Similarity=0.124 Sum_probs=53.6
Q ss_pred eCCccccceEEEEeC--CccEEEEecCCCCc----chHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEecccCC
Q 022304 30 VGGGCINLASRYGTD--AGSFFVKTNRSIGP----SMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFG 103 (299)
Q Consensus 30 ~~~G~~n~~y~v~~~--~g~~vlK~~~~~~~----~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~ 103 (299)
++.|..+.+|++... +..+++|+...... ..+.+|...++.+.. ..+++++..... .+..++++++++|.
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~---~~i~~~~~~~~~-~~~~~~~~e~~~~~ 76 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNH---PNIVKLYGVFED-ENHLYLVMEYCEGG 76 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCC---CCeeeEeeeeec-CCeEEEEEecCCCC
Confidence 467778899999986 44899999986432 467888888888754 466777766544 46889999999985
Q ss_pred C
Q 022304 104 S 104 (299)
Q Consensus 104 ~ 104 (299)
+
T Consensus 77 ~ 77 (215)
T cd00180 77 S 77 (215)
T ss_pred c
Confidence 3
No 80
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=98.42 E-value=2.2e-06 Score=78.06 Aligned_cols=138 Identities=16% Similarity=0.203 Sum_probs=89.0
Q ss_pred ceeeeeeeCCccccceEEEEeC-Cc-cEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceE
Q 022304 23 HITKICPVGGGCINLASRYGTD-AG-SFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSY 94 (299)
Q Consensus 23 ~~~~~~~~~~G~~n~~y~v~~~-~g-~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~ 94 (299)
....+..||.|....||.++-. .| -|.+|+-... +-..+.+|.++|.. .. +--|.++|..-.+ ...-|
T Consensus 142 DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~-~d--s~~vVKLyYsFQD-~~~LY 217 (550)
T KOG0605|consen 142 DFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAE-VD--SPWVVKLYYSFQD-KEYLY 217 (550)
T ss_pred cchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhh-cC--CCcEEEEEEEecC-CCeeE
Confidence 3445788999999999999864 34 4666876542 22446778877755 22 3456667654332 46889
Q ss_pred EEEecccCCCCCCcHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCCCCHHHHHHHhhhHHHHHHHHhhcCChH
Q 022304 95 IIMEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDST 174 (299)
Q Consensus 95 ~v~e~l~G~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (299)
++|||++|++ ++..|-+.- ...++|..||..+.+.
T Consensus 218 LiMEylPGGD-------~mTLL~~~~------------------------~L~e~~arfYiaE~vl-------------- 252 (550)
T KOG0605|consen 218 LIMEYLPGGD-------MMTLLMRKD------------------------TLTEDWARFYIAETVL-------------- 252 (550)
T ss_pred EEEEecCCcc-------HHHHHHhcC------------------------cCchHHHHHHHHHHHH--------------
Confidence 9999999983 344443321 1124677777542111
Q ss_pred HHHHHHHHHHHHhccccCCCCCcceeccCCCCCCeeecCCCCeEEEcccc
Q 022304 175 IYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPAC 224 (299)
Q Consensus 175 ~~~~~~~~~~~l~~~l~~~~~~~~liHgDl~~~Nvl~~~~~~~~iID~~~ 224 (299)
. +..+. ..+.||.|++|+|+|+|..|.+-+-||..
T Consensus 253 ---A-------I~~iH-----~~gyIHRDIKPdNlLiD~~GHiKLSDFGL 287 (550)
T KOG0605|consen 253 ---A-------IESIH-----QLGYIHRDIKPDNLLIDAKGHIKLSDFGL 287 (550)
T ss_pred ---H-------HHHHH-----HcCcccccCChhheeecCCCCEeeccccc
Confidence 1 11111 36899999999999999999888888753
No 81
>PRK09188 serine/threonine protein kinase; Provisional
Probab=98.30 E-value=5.2e-06 Score=74.65 Aligned_cols=73 Identities=12% Similarity=0.030 Sum_probs=50.1
Q ss_pred eeeeeCCccccceEEEEeC--Cc-cEEEEecCCC--------CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceE
Q 022304 26 KICPVGGGCINLASRYGTD--AG-SFFVKTNRSI--------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSY 94 (299)
Q Consensus 26 ~~~~~~~G~~n~~y~v~~~--~g-~~vlK~~~~~--------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~ 94 (299)
-...+|.|..+.||+.... ++ .+.+|..... ....+.+|+++++.|... -.+|.++.. +..|
T Consensus 22 ~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~--~iv~~l~~~-----~~~~ 94 (365)
T PRK09188 22 ETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGI--GVVPQLLAT-----GKDG 94 (365)
T ss_pred EccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCC--CCCcEEEEc-----CCcE
Confidence 3466888989999998653 34 4467764321 134578999999999753 235666543 3579
Q ss_pred EEEecccCCCC
Q 022304 95 IIMEFIEFGSS 105 (299)
Q Consensus 95 ~v~e~l~G~~~ 105 (299)
++|||++|..+
T Consensus 95 LVmE~~~G~~L 105 (365)
T PRK09188 95 LVRGWTEGVPL 105 (365)
T ss_pred EEEEccCCCCH
Confidence 99999999644
No 82
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=98.19 E-value=2.5e-05 Score=75.11 Aligned_cols=174 Identities=11% Similarity=0.061 Sum_probs=101.8
Q ss_pred Ccceeeeee-eCCccccceEEEEeCCc--cEEEEec-CCC--CcchHHHHHHHHHHHHhcCCCCCccceeecc-cC----
Q 022304 21 ATHITKICP-VGGGCINLASRYGTDAG--SFFVKTN-RSI--GPSMFEGEALGLGAMYETRTIRAPRPFKVGA-LP---- 89 (299)
Q Consensus 21 ~~~~~~~~~-~~~G~~n~~y~v~~~~g--~~vlK~~-~~~--~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~-~~---- 89 (299)
|..-+.|++ |..|....||.+.+..+ +|++|.- ..+ ....+.+|+++++.|+.+ |.++.+.+ ..
T Consensus 35 g~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh-----~nIV~yidss~~~~~ 109 (738)
T KOG1989|consen 35 GSHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGH-----KNIVSYIDSSAINRS 109 (738)
T ss_pred CCEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCC-----CceeeEecccccccc
Confidence 444455655 46676789999998654 7888744 333 245678999999999876 55554332 11
Q ss_pred -CC---ceEEEEecccCCCCCCcHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCCCCHHHHHHHhhhHHHHHH
Q 022304 90 -TG---GSYIIMEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKL 165 (299)
Q Consensus 90 -~~---~~~~v~e~l~G~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (299)
.+ ...++|||+.|. .|.+.+.+.=+.... . . +
T Consensus 110 ~~~~~~EvllLmEyC~gg-------~Lvd~mn~Rlq~~lt----------------------e--------~---e---- 145 (738)
T KOG1989|consen 110 SNNGVWEVLLLMEYCKGG-------SLVDFMNTRLQTRLT----------------------E--------D---E---- 145 (738)
T ss_pred CCCceeEEEeehhhccCC-------cHHHHHHHHHhccCC----------------------h--------H---H----
Confidence 12 357899999976 334444432111110 0 0 0
Q ss_pred HHhhcCChHHHHHHHHHHHHHhccccCCCCCcceeccCCCCCCeeecCCCCeEEEccc-cc--cCC--chhhhhhhhh--
Q 022304 166 ALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA-CY--YGH--NEAEFGMSWC-- 238 (299)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~liHgDl~~~Nvl~~~~~~~~iID~~-~~--~g~--~~~Dla~~~~-- 238 (299)
....+..+.+.+..+. ..++.|||+||+..|||++.++...++||. ++ +-. -..++.++..
T Consensus 146 ---------VLkIf~dv~~AVa~mH---~~~pPiIHRDLKiENvLls~~g~~KLCDFGSatt~~~~~~~~~e~~~ve~eI 213 (738)
T KOG1989|consen 146 ---------VLKIFYDVCEAVAAMH---YLKPPIIHRDLKIENVLLSADGNYKLCDFGSATTKILSPTSAQEVNYVEEEI 213 (738)
T ss_pred ---------HHHHHHHHHHHHHHHh---cCCCccchhhhhhhheEEcCCCCEEeCcccccccccCCCccHHHHHHHHHHH
Confidence 0112222233333222 257899999999999999988888999985 32 222 3444444421
Q ss_pred -----cC-CChhhHHHhhhhCCCC
Q 022304 239 -----AG-FGGSFYNSYFEVMPKQ 256 (299)
Q Consensus 239 -----~~-~~~~f~~~Y~~~~~l~ 256 (299)
.. -..+-++-|.-. |++
T Consensus 214 ~k~TTp~YRsPEMIDlysg~-pI~ 236 (738)
T KOG1989|consen 214 EKYTTPQYRSPEMIDLYSGL-PIG 236 (738)
T ss_pred HhhCCccccChHHHhhhcCC-CCc
Confidence 11 224677888743 444
No 83
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=98.18 E-value=1.5e-05 Score=72.32 Aligned_cols=76 Identities=17% Similarity=0.127 Sum_probs=52.0
Q ss_pred eeeeeCCccccceEEEEeCC--ccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEE
Q 022304 26 KICPVGGGCINLASRYGTDA--GSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM 97 (299)
Q Consensus 26 ~~~~~~~G~~n~~y~v~~~~--g~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~ 97 (299)
-++.+|.|..+.||++.... ..|.+|+.... ....+..|.++++.+.. -.+++++..... .+..+++|
T Consensus 5 ~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h---~~iv~~~~~~~~-~~~~~lv~ 80 (376)
T cd05598 5 KIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADN---EWVVKLYYSFQD-KDNLYFVM 80 (376)
T ss_pred EEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCC---CCcceEEEEEEc-CCEEEEEE
Confidence 35788999899999998643 37888987531 12346678888877753 234555544332 56889999
Q ss_pred ecccCCCC
Q 022304 98 EFIEFGSS 105 (299)
Q Consensus 98 e~l~G~~~ 105 (299)
||++|..+
T Consensus 81 E~~~~g~L 88 (376)
T cd05598 81 DYIPGGDM 88 (376)
T ss_pred eCCCCCcH
Confidence 99998744
No 84
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=98.14 E-value=6.1e-06 Score=76.90 Aligned_cols=161 Identities=17% Similarity=0.181 Sum_probs=95.3
Q ss_pred CCcchHHHHHHhc--CC---------CcceeeeeeeCCccccceEEEEeCCc--cEEEEecCCC------CcchHHHHHH
Q 022304 6 LSDDPIREWILSE--GK---------ATHITKICPVGGGCINLASRYGTDAG--SFFVKTNRSI------GPSMFEGEAL 66 (299)
Q Consensus 6 ~~~~~i~~~l~~~--~~---------~~~~~~~~~~~~G~~n~~y~v~~~~g--~~vlK~~~~~------~~~~~~~E~~ 66 (299)
...++.++.|... .+ -.-.+.|..||-|....|-.+...+. -|..|.-+.. .-..+++|.+
T Consensus 602 ~~q~qMrkmL~QKESnYiRLkRaKMdKSmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERD 681 (1034)
T KOG0608|consen 602 IMQNQMRKMLQQKESNYIRLKRAKMDKSMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERD 681 (1034)
T ss_pred HHHHHHHHHHHhhhhhHHHHHHhhccccceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhh
Confidence 3445566666543 11 23467788999887777666554332 3444543321 1234567777
Q ss_pred HHHHHHhcCCCCCccceeecccCCCceEEEEecccCCCCCCcHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCC
Q 022304 67 GLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKW 146 (299)
Q Consensus 67 ~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~g~~~~~~~~ 146 (299)
+|..-. .--|.++|..-.+ ++.-|+||+||+|+ .|...|-+|-- |.
T Consensus 682 ILAEAD---n~WVVrLyySFQD-kdnLYFVMdYIPGG-------DmMSLLIrmgI-------Fe---------------- 727 (1034)
T KOG0608|consen 682 ILAEAD---NEWVVRLYYSFQD-KDNLYFVMDYIPGG-------DMMSLLIRMGI-------FE---------------- 727 (1034)
T ss_pred hHhhcC---CcceEEEEEEecc-CCceEEEEeccCCc-------cHHHHHHHhcc-------CH----------------
Confidence 664332 3468888865433 57889999999998 45566665411 11
Q ss_pred CCCHHHHHHHhhhHHHHHHHHhhcCChHHHHHHHHHHHHHhccccCCCCCcceeccCCCCCCeeecCCCCeEEEcccccc
Q 022304 147 TSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYY 226 (299)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~liHgDl~~~Nvl~~~~~~~~iID~~~~~ 226 (299)
++...||.. .+.=.++. . -.-++||+|++|+|||+|.+|.+.+-||..|-
T Consensus 728 -E~LARFYIA---------------------EltcAies---V-----HkmGFIHRDiKPDNILIDrdGHIKLTDFGLCT 777 (1034)
T KOG0608|consen 728 -EDLARFYIA---------------------ELTCAIES---V-----HKMGFIHRDIKPDNILIDRDGHIKLTDFGLCT 777 (1034)
T ss_pred -HHHHHHHHH---------------------HHHHHHHH---H-----HhccceecccCccceEEccCCceeeeeccccc
Confidence 111112211 11111111 1 14689999999999999999988999987665
Q ss_pred CCch
Q 022304 227 GHNE 230 (299)
Q Consensus 227 g~~~ 230 (299)
|-++
T Consensus 778 GfRW 781 (1034)
T KOG0608|consen 778 GFRW 781 (1034)
T ss_pred ccee
Confidence 5443
No 85
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=98.14 E-value=1.7e-05 Score=72.21 Aligned_cols=76 Identities=17% Similarity=0.099 Sum_probs=51.6
Q ss_pred eeeeeeCCccccceEEEEeC-Cc-cEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEE
Q 022304 25 TKICPVGGGCINLASRYGTD-AG-SFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII 96 (299)
Q Consensus 25 ~~~~~~~~G~~n~~y~v~~~-~g-~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v 96 (299)
..++.+|.|..+.||++... .+ .|.+|+.... ....+..|..+++.+.. -.+++++..... .+..+++
T Consensus 4 ~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h---~~iv~l~~~~~~-~~~~~lv 79 (381)
T cd05626 4 VKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADN---EWVVKLYYSFQD-KDNLYFV 79 (381)
T ss_pred eEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCC---CCeeeeEEEEec-CCEEEEE
Confidence 45678999999999998763 23 7888987531 12335677777776643 235555554433 5678999
Q ss_pred EecccCCC
Q 022304 97 MEFIEFGS 104 (299)
Q Consensus 97 ~e~l~G~~ 104 (299)
|||++|..
T Consensus 80 ~E~~~gg~ 87 (381)
T cd05626 80 MDYIPGGD 87 (381)
T ss_pred EecCCCCc
Confidence 99999874
No 86
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=98.12 E-value=2.2e-05 Score=70.76 Aligned_cols=77 Identities=18% Similarity=0.138 Sum_probs=50.0
Q ss_pred eeeeeeCCccccceEEEEeCC-c-cEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEE
Q 022304 25 TKICPVGGGCINLASRYGTDA-G-SFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII 96 (299)
Q Consensus 25 ~~~~~~~~G~~n~~y~v~~~~-g-~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v 96 (299)
..++.+|.|..+.||++...+ + .|.+|+.... ....+..|..++..+.. -.+++++..... .+..+++
T Consensus 4 ~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~---~~iv~~~~~~~~-~~~~~lv 79 (360)
T cd05627 4 ESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADG---AWVVKMFYSFQD-KRNLYLI 79 (360)
T ss_pred eEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCC---CCEeeEEEEEEc-CCEEEEE
Confidence 346778888889999988743 3 7888976531 12345667777666532 234455543332 4678999
Q ss_pred EecccCCCC
Q 022304 97 MEFIEFGSS 105 (299)
Q Consensus 97 ~e~l~G~~~ 105 (299)
|||++|..+
T Consensus 80 ~E~~~gg~L 88 (360)
T cd05627 80 MEFLPGGDM 88 (360)
T ss_pred EeCCCCccH
Confidence 999998743
No 87
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=98.12 E-value=2e-05 Score=71.22 Aligned_cols=76 Identities=18% Similarity=0.146 Sum_probs=50.1
Q ss_pred eeeeeCCccccceEEEEeCC-c-cEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEE
Q 022304 26 KICPVGGGCINLASRYGTDA-G-SFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM 97 (299)
Q Consensus 26 ~~~~~~~G~~n~~y~v~~~~-g-~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~ 97 (299)
-++.+|.|..+.||++.... + .|.+|+.... ....+..|..++..+.. ..+++.+..... ....+++|
T Consensus 5 ~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~---~~iv~~~~~~~~-~~~~~lv~ 80 (363)
T cd05628 5 SLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADS---LWVVKMFYSFQD-KLNLYLIM 80 (363)
T ss_pred EeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCC---CCcceEEEEEec-CCeEEEEE
Confidence 45678888889999987642 3 7888987531 12345667777766632 234555544332 46789999
Q ss_pred ecccCCCC
Q 022304 98 EFIEFGSS 105 (299)
Q Consensus 98 e~l~G~~~ 105 (299)
||++|..+
T Consensus 81 E~~~gg~L 88 (363)
T cd05628 81 EFLPGGDM 88 (363)
T ss_pred cCCCCCcH
Confidence 99998643
No 88
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=98.11 E-value=2.1e-05 Score=73.47 Aligned_cols=98 Identities=13% Similarity=0.105 Sum_probs=64.1
Q ss_pred CCcchHHHHHHhcCCCcceee----e--eeeCCccccceEEEEeCCc-cEEEEecCCCCc--------------------
Q 022304 6 LSDDPIREWILSEGKATHITK----I--CPVGGGCINLASRYGTDAG-SFFVKTNRSIGP-------------------- 58 (299)
Q Consensus 6 ~~~~~i~~~l~~~~~~~~~~~----~--~~~~~G~~n~~y~v~~~~g-~~vlK~~~~~~~-------------------- 58 (299)
-+.+++.+++++. +|..+.+ + +|++.-....|++.++.+| .++||+-+++-+
T Consensus 140 ~~~ee~~~i~e~E-lG~~ie~if~~f~~~piaaASlaQVhrA~L~~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~ 218 (538)
T KOG1235|consen 140 FPWEEAFKIFEEE-LGAPIEDIFSEFDEEPIAAASLAQVHRARLKNGEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKF 218 (538)
T ss_pred CCHHHHHHHHHHH-hCCCHHHHHHhcCcchhhhcchhheEEEEecCCCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHh
Confidence 3568888999888 5554432 3 5565545568999999888 699998776300
Q ss_pred --------------ch------HHHHHHHH----HHHHhcC---CCCCccceeecccCCCceEEEEecccCCCCCC
Q 022304 59 --------------SM------FEGEALGL----GAMYETR---TIRAPRPFKVGALPTGGSYIIMEFIEFGSSRG 107 (299)
Q Consensus 59 --------------~~------~~~E~~~l----~~L~~~~---~~~vP~~~~~~~~~~~~~~~v~e~l~G~~~~~ 107 (299)
.. +-.|++-. +.++... .+.||++|+.-. +.-.++|||++|.+..+
T Consensus 219 ~p~~~~~~lvdE~~~~L~~ELDF~~EA~Nae~~~~~f~~~~~~~~V~VP~Vy~~~s---t~RVLtME~~~G~~i~D 291 (538)
T KOG1235|consen 219 FPDFDLVWLVDEIAKSLPQELDFTKEAKNAERFRENFKDFSLLTYVLVPKVYWDLS---TKRVLTMEYVDGIKIND 291 (538)
T ss_pred CcCCchhhHHHHHHhhhHhhcchHHHHHhHHHHHHHHHhcccccceeCCeehhhcC---cceEEEEEecCCccCCC
Confidence 01 11233222 2333332 477999998764 47799999999987753
No 89
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=98.11 E-value=3.3e-05 Score=65.69 Aligned_cols=73 Identities=22% Similarity=0.137 Sum_probs=49.5
Q ss_pred eeCCccccceEEEEeC--CccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEecccC
Q 022304 29 PVGGGCINLASRYGTD--AGSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEF 102 (299)
Q Consensus 29 ~~~~G~~n~~y~v~~~--~g~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G 102 (299)
.++.|..+.+|+++.. ++.+++|...... ...+..|.++++.+.. -.+++++..... ....+++|||++|
T Consensus 2 ~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~lv~e~~~~ 77 (252)
T cd05084 2 RIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSH---PNIVRLIGVCTQ-KQPIYIVMELVQG 77 (252)
T ss_pred ccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCC---CCcceEEEEEcC-CCCeEEEEeeccC
Confidence 5777888899998763 3378889765321 2446778888877743 234556655433 4678999999998
Q ss_pred CCC
Q 022304 103 GSS 105 (299)
Q Consensus 103 ~~~ 105 (299)
..+
T Consensus 78 ~~L 80 (252)
T cd05084 78 GDF 80 (252)
T ss_pred CcH
Confidence 744
No 90
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=98.09 E-value=2.2e-05 Score=70.60 Aligned_cols=76 Identities=13% Similarity=0.086 Sum_probs=51.3
Q ss_pred eeeeeCCccccceEEEEeC-C-ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEec
Q 022304 26 KICPVGGGCINLASRYGTD-A-GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 99 (299)
Q Consensus 26 ~~~~~~~G~~n~~y~v~~~-~-g~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~ 99 (299)
.++.++.|..+.||++... + ..|++|+..... ...+..|+++++.+.. -.+.+++..... .+..+++|||
T Consensus 78 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h---~~iv~~~~~~~~-~~~~~lv~e~ 153 (353)
T PLN00034 78 RVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNH---PNVVKCHDMFDH-NGEIQVLLEF 153 (353)
T ss_pred hhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCC---CCcceeeeEecc-CCeEEEEEec
Confidence 3567888888999998764 3 378999875321 2446778888877753 233444443322 4678999999
Q ss_pred ccCCCC
Q 022304 100 IEFGSS 105 (299)
Q Consensus 100 l~G~~~ 105 (299)
++|..+
T Consensus 154 ~~~~~L 159 (353)
T PLN00034 154 MDGGSL 159 (353)
T ss_pred CCCCcc
Confidence 998754
No 91
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=98.07 E-value=3.2e-05 Score=68.86 Aligned_cols=76 Identities=11% Similarity=0.011 Sum_probs=48.8
Q ss_pred eeeeCCccccceEEEEeC----Cc-cEEEEecCCC-------CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceE
Q 022304 27 ICPVGGGCINLASRYGTD----AG-SFFVKTNRSI-------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSY 94 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~~----~g-~~vlK~~~~~-------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~ 94 (299)
++.+|.|..+.||++... .+ .+.+|+.... ....+..|..+++.+..+ -.+++++..... .+..+
T Consensus 5 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~--~~i~~~~~~~~~-~~~~~ 81 (332)
T cd05614 5 LKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQS--PFLVTLHYAFQT-EAKLH 81 (332)
T ss_pred EEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCC--CCcccEEEEEec-CCEEE
Confidence 467888888999998752 23 6788876431 113356788888777543 123444433322 46789
Q ss_pred EEEecccCCCC
Q 022304 95 IIMEFIEFGSS 105 (299)
Q Consensus 95 ~v~e~l~G~~~ 105 (299)
++|||++|..+
T Consensus 82 lv~e~~~~g~L 92 (332)
T cd05614 82 LILDYVSGGEM 92 (332)
T ss_pred EEEeCCCCCcH
Confidence 99999998743
No 92
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=98.06 E-value=3.3e-05 Score=68.60 Aligned_cols=76 Identities=12% Similarity=0.033 Sum_probs=48.0
Q ss_pred eeeeCCccccceEEEEeCC-c-cEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEe
Q 022304 27 ICPVGGGCINLASRYGTDA-G-SFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 98 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~~~-g-~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e 98 (299)
+..+|.|..+.||++...+ + .|++|+.... ....+..|...+..+... -.+++++..... .+..|++||
T Consensus 5 ~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~--~~i~~~~~~~~~-~~~~~lv~E 81 (324)
T cd05587 5 LMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKP--PFLTQLHSCFQT-MDRLYFVME 81 (324)
T ss_pred EEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCC--CceeeeEEEEEc-CCEEEEEEc
Confidence 4678888889999997643 2 6889987531 122344566666555432 224444443322 467899999
Q ss_pred cccCCCC
Q 022304 99 FIEFGSS 105 (299)
Q Consensus 99 ~l~G~~~ 105 (299)
|++|..+
T Consensus 82 ~~~~g~L 88 (324)
T cd05587 82 YVNGGDL 88 (324)
T ss_pred CCCCCcH
Confidence 9998743
No 93
>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]
Probab=98.06 E-value=1.9e-05 Score=69.77 Aligned_cols=75 Identities=20% Similarity=0.274 Sum_probs=55.0
Q ss_pred ceeeeee-eCCccccceEEEEeCCc-cEEEEecCCC-------------------------C----cchHHHHHHHHHHH
Q 022304 23 HITKICP-VGGGCINLASRYGTDAG-SFFVKTNRSI-------------------------G----PSMFEGEALGLGAM 71 (299)
Q Consensus 23 ~~~~~~~-~~~G~~n~~y~v~~~~g-~~vlK~~~~~-------------------------~----~~~~~~E~~~l~~L 71 (299)
.+..+.. |+.|-...||-++..+| .|.+||+... + +...+.|.+-|..|
T Consensus 144 ~i~~inGCiSTGKEANVYHat~~dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl 223 (520)
T KOG2270|consen 144 VIVEINGCISTGKEANVYHATEEDGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRL 223 (520)
T ss_pred eeeecccccccCccceeEeeecCCCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHH
Confidence 4555533 45666778999998887 7899988421 0 12346788889999
Q ss_pred HhcCCCCCccceeecccCCCceEEEEecccCC
Q 022304 72 YETRTIRAPRPFKVGALPTGGSYIIMEFIEFG 103 (299)
Q Consensus 72 ~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~ 103 (299)
++. |+|+|+|+... .+.+||+|+.+.
T Consensus 224 ~~a-GIP~PePIlLk-----~hVLVM~FlGrd 249 (520)
T KOG2270|consen 224 NNA-GIPCPEPILLK-----NHVLVMEFLGRD 249 (520)
T ss_pred Hhc-CCCCCCceeee-----cceEeeeeccCC
Confidence 876 79999999886 459999999753
No 94
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=98.06 E-value=1.8e-05 Score=70.67 Aligned_cols=77 Identities=16% Similarity=0.157 Sum_probs=50.7
Q ss_pred eeeeCCccccceEEEEe------CC-ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEE
Q 022304 27 ICPVGGGCINLASRYGT------DA-GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI 95 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~------~~-g~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~ 95 (299)
.+.+|.|..+.||++.. .. ..+.+|+..... ...+..|..++..+..+ -.+.+++.......+..++
T Consensus 12 ~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h--~niv~~~~~~~~~~~~~~l 89 (338)
T cd05102 12 GKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNH--LNVVNLLGACTKPNGPLMV 89 (338)
T ss_pred eeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccC--cceeeEEeEecCCCCceEE
Confidence 46788898899999863 11 268888875421 23466788888888544 2345555543321346789
Q ss_pred EEecccCCCC
Q 022304 96 IMEFIEFGSS 105 (299)
Q Consensus 96 v~e~l~G~~~ 105 (299)
+|||++|..+
T Consensus 90 v~ey~~~g~L 99 (338)
T cd05102 90 IVEFCKYGNL 99 (338)
T ss_pred EEecCCCCcH
Confidence 9999999865
No 95
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=98.04 E-value=4.4e-05 Score=69.33 Aligned_cols=76 Identities=17% Similarity=0.180 Sum_probs=51.8
Q ss_pred eeeeCCccccceEEEEe------CCc-cEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEE
Q 022304 27 ICPVGGGCINLASRYGT------DAG-SFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI 95 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~------~~g-~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~ 95 (299)
.+.+|.|..+.||+++. +.+ .+.+|+.... ....+..|.+++..+..+ -.+.+++..... .+..++
T Consensus 40 ~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~H--pnIv~l~~~~~~-~~~~~l 116 (375)
T cd05104 40 GKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH--INIVNLLGACTV-GGPTLV 116 (375)
T ss_pred hheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCC--cceeeeeeeecc-CCccee
Confidence 46788888899999863 122 6788876532 123466799888888544 245556654433 467899
Q ss_pred EEecccCCCC
Q 022304 96 IMEFIEFGSS 105 (299)
Q Consensus 96 v~e~l~G~~~ 105 (299)
+|||++|.++
T Consensus 117 v~E~~~~g~L 126 (375)
T cd05104 117 ITEYCCYGDL 126 (375)
T ss_pred eehhccCCcH
Confidence 9999999765
No 96
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.03 E-value=8.9e-05 Score=66.89 Aligned_cols=142 Identities=20% Similarity=0.222 Sum_probs=90.4
Q ss_pred eeeCCccccceEEEEeCCc-cEEEEecCCCC---cchHHHHHHHHHHHHhcCCCCCccceeecccCCC-ceEEEEecccC
Q 022304 28 CPVGGGCINLASRYGTDAG-SFFVKTNRSIG---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTG-GSYIIMEFIEF 102 (299)
Q Consensus 28 ~~~~~G~~n~~y~v~~~~g-~~vlK~~~~~~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~-~~~~v~e~l~G 102 (299)
..+|.|....||+-...+| .+.||...... ...+..|+.++..++ | -.+-+++.++.. .+ ..++|+||++.
T Consensus 81 ~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~-H--~Nlv~LlGyC~e-~~~~~~LVYEym~n 156 (361)
T KOG1187|consen 81 NLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLR-H--PNLVKLLGYCLE-GGEHRLLVYEYMPN 156 (361)
T ss_pred cceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCC-C--cCcccEEEEEec-CCceEEEEEEccCC
Confidence 3567777889999999886 68888554421 234888999888887 3 356667887764 34 48999999998
Q ss_pred CCCCCcHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCCCCHHHHHHHhhhHHHHHHHHhhcCChHHHHHHHHH
Q 022304 103 GSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRL 182 (299)
Q Consensus 103 ~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (299)
+.+. ..||..... ..+|.. |+.-.+ .+
T Consensus 157 GsL~----------d~L~~~~~~---------------------~L~W~~-----R~kIa~-----------------g~ 183 (361)
T KOG1187|consen 157 GSLE----------DHLHGKKGE---------------------PLDWET-----RLKIAL-----------------GA 183 (361)
T ss_pred CCHH----------HHhCCCCCC---------------------CCCHHH-----HHHHHH-----------------HH
Confidence 6442 123332210 125643 222111 11
Q ss_pred HHHHhccccCCCCCcceeccCCCCCCeeecCCCCeEEEccc-cccCC
Q 022304 183 MKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA-CYYGH 228 (299)
Q Consensus 183 ~~~l~~~l~~~~~~~~liHgDl~~~Nvl~~~~~~~~iID~~-~~~g~ 228 (299)
...+. +|.. ..++.+||+|+++.|||+|.+.++.|-||. +..++
T Consensus 184 A~gL~-yLH~-~~~~~iiHrDiKssNILLD~~~~aKlsDFGLa~~~~ 228 (361)
T KOG1187|consen 184 ARGLA-YLHE-GCPPPIIHRDIKSSNILLDEDFNAKLSDFGLAKLGP 228 (361)
T ss_pred HHHHH-HHcc-CCCCCEecCCCCHHHeeECCCCCEEccCccCcccCC
Confidence 11222 2222 356799999999999999988888898974 44444
No 97
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=98.02 E-value=2.7e-05 Score=69.72 Aligned_cols=75 Identities=15% Similarity=0.073 Sum_probs=49.4
Q ss_pred eeeeCCccccceEEEEeC--CccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEe
Q 022304 27 ICPVGGGCINLASRYGTD--AGSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 98 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~~--~g~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e 98 (299)
++.++.|..+.||++... +..|++|+.... ....+..|..++..+.. -.+++++..... .+..+++||
T Consensus 6 ~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~---~~i~~~~~~~~~-~~~~~lv~e 81 (350)
T cd05573 6 IKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADS---PWIVKLYYSFQD-EEHLYLVME 81 (350)
T ss_pred EEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCC---CCccchhhheec-CCeEEEEEc
Confidence 467888888999999875 347889987531 12345677777776652 234444433222 467899999
Q ss_pred cccCCCC
Q 022304 99 FIEFGSS 105 (299)
Q Consensus 99 ~l~G~~~ 105 (299)
|++|.++
T Consensus 82 ~~~~~~L 88 (350)
T cd05573 82 YMPGGDL 88 (350)
T ss_pred CCCCCCH
Confidence 9998643
No 98
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=98.02 E-value=8.6e-05 Score=63.69 Aligned_cols=75 Identities=20% Similarity=0.225 Sum_probs=51.2
Q ss_pred eeeeeCCccccceEEEEeCC-ccEEEEecCCC--CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEecccC
Q 022304 26 KICPVGGGCINLASRYGTDA-GSFFVKTNRSI--GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEF 102 (299)
Q Consensus 26 ~~~~~~~G~~n~~y~v~~~~-g~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G 102 (299)
-.+.++.|..+.||++...+ +++.+|+.... ....+..|.++++.+.. ..+.+++.... .+..+++|++++|
T Consensus 10 ~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~~~~~~~~E~~~l~~l~~---~~i~~~~~~~~--~~~~~lv~e~~~~ 84 (262)
T cd05071 10 LEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRH---EKLVQLYAVVS--EEPIYIVTEYMSK 84 (262)
T ss_pred EeeecCCCCCCcEEEEEecCCceEEEEecccCccCHHHHHHHHHHHHhCCC---CCcceEEEEEC--CCCcEEEEEcCCC
Confidence 34568888888999987644 37888988642 23456788888888753 23444444332 4567999999998
Q ss_pred CCC
Q 022304 103 GSS 105 (299)
Q Consensus 103 ~~~ 105 (299)
.++
T Consensus 85 ~~L 87 (262)
T cd05071 85 GSL 87 (262)
T ss_pred CcH
Confidence 754
No 99
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=98.02 E-value=6.6e-05 Score=63.69 Aligned_cols=73 Identities=22% Similarity=0.127 Sum_probs=48.7
Q ss_pred eeCCccccceEEEEeCCc-cEEEEecCCCCc----chHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEecccCC
Q 022304 29 PVGGGCINLASRYGTDAG-SFFVKTNRSIGP----SMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFG 103 (299)
Q Consensus 29 ~~~~G~~n~~y~v~~~~g-~~vlK~~~~~~~----~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~ 103 (299)
.++.|..+.||+....++ .+++|....... ..+..|...++.+.. ..+++++..... .+..+++||+++|.
T Consensus 2 ~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~lv~e~~~~~ 77 (250)
T cd05085 2 LLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDH---PNIVKLIGVCTQ-RQPIYIVMELVPGG 77 (250)
T ss_pred ccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCC---CCcCeEEEEEec-CCccEEEEECCCCC
Confidence 467777789999876555 788898764321 235567777777642 235555554433 46789999999987
Q ss_pred CC
Q 022304 104 SS 105 (299)
Q Consensus 104 ~~ 105 (299)
++
T Consensus 78 ~L 79 (250)
T cd05085 78 DF 79 (250)
T ss_pred cH
Confidence 43
No 100
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=98.02 E-value=4e-05 Score=67.96 Aligned_cols=73 Identities=15% Similarity=0.089 Sum_probs=45.4
Q ss_pred eeCCccccceEEEEeCC-c-cEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEecc
Q 022304 29 PVGGGCINLASRYGTDA-G-SFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI 100 (299)
Q Consensus 29 ~~~~G~~n~~y~v~~~~-g-~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l 100 (299)
.+|.|..+.||++...+ + .|.+|+.... ....+..|...+..+..+ -.+++++..... .+..+++|||+
T Consensus 2 ~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h--~~iv~~~~~~~~-~~~~~iv~Ey~ 78 (320)
T cd05590 2 VLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNH--PFLTQLYCCFQT-PDRLFFVMEFV 78 (320)
T ss_pred eeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCC--CchhceeeEEEc-CCEEEEEEcCC
Confidence 46778888999998643 3 6888876531 112234566655554433 234555544332 46789999999
Q ss_pred cCCC
Q 022304 101 EFGS 104 (299)
Q Consensus 101 ~G~~ 104 (299)
+|..
T Consensus 79 ~~g~ 82 (320)
T cd05590 79 NGGD 82 (320)
T ss_pred CCch
Confidence 9863
No 101
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=98.02 E-value=3.5e-05 Score=68.69 Aligned_cols=75 Identities=13% Similarity=-0.026 Sum_probs=49.7
Q ss_pred eeeeCCccccceEEEEeCC--ccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEe
Q 022304 27 ICPVGGGCINLASRYGTDA--GSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 98 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~~~--g~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e 98 (299)
++.++.|..+.||++...+ ..+++|+.... ....+..|..++..+.. -.+++++..... .+..+++||
T Consensus 6 ~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h---~~iv~~~~~~~~-~~~~~lv~e 81 (333)
T cd05600 6 LTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKS---EWLVKLLYAFQD-DEYLYLAME 81 (333)
T ss_pred EEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCC---CCCccEEEEEEc-CCEEEEEEe
Confidence 5678888889999998643 37888987531 12234567777766642 234555544332 467899999
Q ss_pred cccCCCC
Q 022304 99 FIEFGSS 105 (299)
Q Consensus 99 ~l~G~~~ 105 (299)
|++|..+
T Consensus 82 ~~~g~~L 88 (333)
T cd05600 82 YVPGGDF 88 (333)
T ss_pred CCCCCCH
Confidence 9999744
No 102
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=98.02 E-value=5.5e-05 Score=65.92 Aligned_cols=73 Identities=12% Similarity=0.068 Sum_probs=48.6
Q ss_pred eeeeeCCccccceEEEEeC--CccEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEec
Q 022304 26 KICPVGGGCINLASRYGTD--AGSFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 99 (299)
Q Consensus 26 ~~~~~~~G~~n~~y~v~~~--~g~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~ 99 (299)
-++.++.|..+.||+.... +..+.+|..... ....+..|..+++.|.. -.+.+++..... .+..+++||+
T Consensus 9 ~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h---~niv~~~~~~~~-~~~~~lv~e~ 84 (288)
T cd07871 9 KLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKH---ANIVTLHDIIHT-ERCLTLVFEY 84 (288)
T ss_pred EeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCC---CCEeeEEEEEcC-CCeEEEEEeC
Confidence 3567888888999998764 237888876521 12345678888877743 234455544332 4578999999
Q ss_pred ccC
Q 022304 100 IEF 102 (299)
Q Consensus 100 l~G 102 (299)
++|
T Consensus 85 ~~~ 87 (288)
T cd07871 85 LDS 87 (288)
T ss_pred CCc
Confidence 986
No 103
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=98.02 E-value=5.4e-05 Score=67.46 Aligned_cols=75 Identities=12% Similarity=0.048 Sum_probs=49.0
Q ss_pred eeeeCCccccceEEEEeC--CccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEe
Q 022304 27 ICPVGGGCINLASRYGTD--AGSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 98 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~~--~g~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e 98 (299)
++.+|.|..+.||++... +..|.+|+.... ....+..|..++..+.. --++.++..... .+..+++||
T Consensus 6 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~---~~i~~~~~~~~~-~~~~~lv~e 81 (331)
T cd05597 6 LKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDR---RWITNLHYAFQD-ENNLYLVMD 81 (331)
T ss_pred EEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCC---CCCCceEEEEec-CCeEEEEEe
Confidence 467888888999998864 337888986421 12335667776666532 234555544332 567899999
Q ss_pred cccCCCC
Q 022304 99 FIEFGSS 105 (299)
Q Consensus 99 ~l~G~~~ 105 (299)
|++|..+
T Consensus 82 ~~~g~~L 88 (331)
T cd05597 82 YYVGGDL 88 (331)
T ss_pred cCCCCcH
Confidence 9998744
No 104
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=98.01 E-value=9.8e-05 Score=62.94 Aligned_cols=76 Identities=20% Similarity=0.180 Sum_probs=50.9
Q ss_pred eeeeCCccccceEEEEeCCccEEEEecCCC-CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEecccCCCC
Q 022304 27 ICPVGGGCINLASRYGTDAGSFFVKTNRSI-GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSS 105 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~~~g~~vlK~~~~~-~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~~~ 105 (299)
.+.++.|..+.+|+....+..+++|..... ....+..|+..++.+.. ..+.+++.......+..++++|+++|.++
T Consensus 11 ~~~lg~g~~~~v~~~~~~~~~~~~k~~~~~~~~~~~~~e~~~l~~l~~---~~i~~~~~~~~~~~~~~~lv~e~~~~~~L 87 (256)
T cd05082 11 LQTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRH---SNLVQLLGVIVEEKGGLYIVTEYMAKGSL 87 (256)
T ss_pred eeeecccCCCeEEEEEEcCCcEEEEEeCCCchHHHHHHHHHHHHhCCC---CCeeeEEEEEEcCCCceEEEEECCCCCcH
Confidence 356777777899999877778999987643 22346678888777743 23444443322214578999999998744
No 105
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=98.01 E-value=4.4e-05 Score=69.44 Aligned_cols=77 Identities=18% Similarity=0.106 Sum_probs=51.4
Q ss_pred eeeeeeCCccccceEEEEeC-Cc-cEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEE
Q 022304 25 TKICPVGGGCINLASRYGTD-AG-SFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII 96 (299)
Q Consensus 25 ~~~~~~~~G~~n~~y~v~~~-~g-~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v 96 (299)
..+..+|.|..+.||++... .+ .|.+|+.... ....+..|..+++.+.. -.+++++..... .+..+++
T Consensus 4 ~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h---~~iv~~~~~~~~-~~~~~lv 79 (382)
T cd05625 4 VKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADN---EWVVRLYYSFQD-KDNLYFV 79 (382)
T ss_pred EEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCC---CcCCeEEEEEEe-CCEEEEE
Confidence 45678899999999998763 33 6788876531 12345678777776643 235555554332 5678999
Q ss_pred EecccCCCC
Q 022304 97 MEFIEFGSS 105 (299)
Q Consensus 97 ~e~l~G~~~ 105 (299)
|||++|..+
T Consensus 80 ~E~~~gg~L 88 (382)
T cd05625 80 MDYIPGGDM 88 (382)
T ss_pred EeCCCCCcH
Confidence 999998743
No 106
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=98.01 E-value=8.9e-05 Score=69.65 Aligned_cols=75 Identities=16% Similarity=-0.010 Sum_probs=49.0
Q ss_pred eeeeCCccccceEEEEeC---CccEEEEecCCCC---cchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEecc
Q 022304 27 ICPVGGGCINLASRYGTD---AGSFFVKTNRSIG---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI 100 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~~---~g~~vlK~~~~~~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l 100 (299)
.+.++.|....+|++... +..+++|...... ...++.|+.++..+.. -.+++++..... .+..+++|||+
T Consensus 72 ~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~H---pniv~~~~~~~~-~~~~~lv~E~~ 147 (478)
T PTZ00267 72 TTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDH---FGIVKHFDDFKS-DDKLLLIMEYG 147 (478)
T ss_pred EEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCC---CCEeEEEEEEEE-CCEEEEEEECC
Confidence 345677777888988653 2367788654321 2345668877776642 235666655433 57899999999
Q ss_pred cCCCC
Q 022304 101 EFGSS 105 (299)
Q Consensus 101 ~G~~~ 105 (299)
+|.++
T Consensus 148 ~gg~L 152 (478)
T PTZ00267 148 SGGDL 152 (478)
T ss_pred CCCCH
Confidence 99855
No 107
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=98.01 E-value=4.4e-05 Score=67.92 Aligned_cols=75 Identities=20% Similarity=0.151 Sum_probs=48.1
Q ss_pred eeeeCCccccceEEEEeC-Cc-cEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEe
Q 022304 27 ICPVGGGCINLASRYGTD-AG-SFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 98 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~~-~g-~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e 98 (299)
.+.++.|..+.||++... .+ .+++|+.... ....+..|..+++.+.. -.+++++..... ....+++||
T Consensus 6 ~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~---~~i~~~~~~~~~-~~~~~lv~e 81 (330)
T cd05601 6 KSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNS---PWIPQLQYAFQD-KDNLYLVME 81 (330)
T ss_pred EEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCC---CCCcceeeEEec-CCeEEEEEC
Confidence 467888888999998764 33 7888987531 12345667766655432 234555543322 467899999
Q ss_pred cccCCCC
Q 022304 99 FIEFGSS 105 (299)
Q Consensus 99 ~l~G~~~ 105 (299)
|++|..+
T Consensus 82 ~~~~~~L 88 (330)
T cd05601 82 YQPGGDL 88 (330)
T ss_pred CCCCCCH
Confidence 9998743
No 108
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=98.00 E-value=5.1e-05 Score=67.31 Aligned_cols=74 Identities=11% Similarity=0.016 Sum_probs=46.7
Q ss_pred eeCCccccceEEEEeCC-c-cEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEecc
Q 022304 29 PVGGGCINLASRYGTDA-G-SFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI 100 (299)
Q Consensus 29 ~~~~G~~n~~y~v~~~~-g-~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l 100 (299)
.+|.|..+.||++...+ + .|.+|+.... ....+..|.+++..+..+ -.+++++..... .+..+++||++
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h--p~i~~~~~~~~~-~~~~~lv~E~~ 78 (321)
T cd05591 2 VLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKH--PFLTALHCCFQT-KDRLFFVMEYV 78 (321)
T ss_pred ccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCC--CCccceeeEEEc-CCeEEEEEeCC
Confidence 46778888999998643 3 7888987531 112344566666655443 234555544332 46789999999
Q ss_pred cCCCC
Q 022304 101 EFGSS 105 (299)
Q Consensus 101 ~G~~~ 105 (299)
+|..+
T Consensus 79 ~~~~L 83 (321)
T cd05591 79 NGGDL 83 (321)
T ss_pred CCCcH
Confidence 98743
No 109
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=98.00 E-value=4e-05 Score=69.57 Aligned_cols=75 Identities=17% Similarity=0.097 Sum_probs=49.5
Q ss_pred eeeeCCccccceEEEEeC-Cc-cEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEe
Q 022304 27 ICPVGGGCINLASRYGTD-AG-SFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 98 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~~-~g-~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e 98 (299)
++.+|.|..+.||++... .+ .|.+|..... ....+..|..++..+.. --+++++..... .+..|++||
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~h---p~iv~~~~~~~~-~~~~~lv~E 81 (377)
T cd05629 6 VKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDS---PWVVSLYYSFQD-AQYLYLIME 81 (377)
T ss_pred eEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCC---CCcceEEEEEEc-CCeeEEEEe
Confidence 467888888999998763 33 7888876421 12345668877766643 234555554332 467899999
Q ss_pred cccCCCC
Q 022304 99 FIEFGSS 105 (299)
Q Consensus 99 ~l~G~~~ 105 (299)
|++|..+
T Consensus 82 ~~~gg~L 88 (377)
T cd05629 82 FLPGGDL 88 (377)
T ss_pred CCCCCcH
Confidence 9998744
No 110
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=98.00 E-value=4.4e-05 Score=67.57 Aligned_cols=73 Identities=16% Similarity=0.102 Sum_probs=47.1
Q ss_pred eeeCCccccceEEEEeC----Cc-cEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEE
Q 022304 28 CPVGGGCINLASRYGTD----AG-SFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM 97 (299)
Q Consensus 28 ~~~~~G~~n~~y~v~~~----~g-~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~ 97 (299)
+.+|.|..+.||++... .| .|.+|+.... ....+..|..++..|.. -.+++++..... .+..|++|
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h---~niv~~~~~~~~-~~~~~lv~ 77 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNH---PFIVKLHYAFQT-EGKLYLIL 77 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCC---CCcccEEEEEEc-CCEEEEEE
Confidence 45778888899988642 23 6888877531 12334567777777642 234555544333 56889999
Q ss_pred ecccCCC
Q 022304 98 EFIEFGS 104 (299)
Q Consensus 98 e~l~G~~ 104 (299)
||++|..
T Consensus 78 e~~~~~~ 84 (318)
T cd05582 78 DFLRGGD 84 (318)
T ss_pred cCCCCCc
Confidence 9999863
No 111
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=97.99 E-value=5.7e-05 Score=67.28 Aligned_cols=75 Identities=13% Similarity=0.033 Sum_probs=50.8
Q ss_pred eeeeCCccccceEEEEeCC-c-cEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEe
Q 022304 27 ICPVGGGCINLASRYGTDA-G-SFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 98 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~~~-g-~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e 98 (299)
.+.++.|..+.||++.... + .+++|+.... ....+..|..+++.+.. -.+.+++..... .+..+++||
T Consensus 23 ~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~h---p~iv~~~~~~~~-~~~~~lv~e 98 (329)
T PTZ00263 23 GETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSH---PFIVNMMCSFQD-ENRVYFLLE 98 (329)
T ss_pred EEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCC---CCCCcEEEEEEc-CCEEEEEEc
Confidence 4678888889999988642 3 7888977531 12346678888877743 234555544332 568899999
Q ss_pred cccCCCC
Q 022304 99 FIEFGSS 105 (299)
Q Consensus 99 ~l~G~~~ 105 (299)
+++|..+
T Consensus 99 ~~~~~~L 105 (329)
T PTZ00263 99 FVVGGEL 105 (329)
T ss_pred CCCCChH
Confidence 9998743
No 112
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=97.99 E-value=5e-05 Score=68.54 Aligned_cols=74 Identities=18% Similarity=0.140 Sum_probs=50.6
Q ss_pred eeeeCCccccceEEEEeC-Cc-cEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEe
Q 022304 27 ICPVGGGCINLASRYGTD-AG-SFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 98 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~~-~g-~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e 98 (299)
++.+|.|..+.||++... .+ .+++|+.... ....+..|..++..+.. -.+++++..... .+..+++||
T Consensus 6 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h---~~iv~~~~~~~~-~~~~~lv~E 81 (364)
T cd05599 6 IKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADN---PWVVKLYYSFQD-ENYLYLIME 81 (364)
T ss_pred EEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCC---CCCcceEEEEEc-CCeEEEEEC
Confidence 567888888999998874 23 7888987531 12335678888877752 235556654333 568899999
Q ss_pred cccCCC
Q 022304 99 FIEFGS 104 (299)
Q Consensus 99 ~l~G~~ 104 (299)
+++|..
T Consensus 82 ~~~~g~ 87 (364)
T cd05599 82 YLPGGD 87 (364)
T ss_pred CCCCcH
Confidence 998863
No 113
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=97.98 E-value=0.00011 Score=62.95 Aligned_cols=76 Identities=21% Similarity=0.207 Sum_probs=51.2
Q ss_pred eeeeeCCccccceEEEEeCCc-cEEEEecCCCC--cchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEecccC
Q 022304 26 KICPVGGGCINLASRYGTDAG-SFFVKTNRSIG--PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEF 102 (299)
Q Consensus 26 ~~~~~~~G~~n~~y~v~~~~g-~~vlK~~~~~~--~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G 102 (299)
-.+.++.|..+.+|++...++ .+++|...... ...+..|...++.+.. ..+++++..... .+..+++|++++|
T Consensus 10 ~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~lv~e~~~~ 85 (261)
T cd05068 10 LLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGTMDPKDFLAEAQIMKKLRH---PKLIQLYAVCTL-EEPIYIVTELMKY 85 (261)
T ss_pred eEEEecccCCccEEEEEecCCeEEEEEeeCCCcccHHHHHHHHHHHHHCCC---CCccceeEEEec-CCCeeeeeecccC
Confidence 347788888889999775444 78888876422 2446678888877753 234555554332 4678999999988
Q ss_pred CCC
Q 022304 103 GSS 105 (299)
Q Consensus 103 ~~~ 105 (299)
.++
T Consensus 86 ~~L 88 (261)
T cd05068 86 GSL 88 (261)
T ss_pred CcH
Confidence 644
No 114
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=97.98 E-value=5.2e-05 Score=67.39 Aligned_cols=136 Identities=18% Similarity=0.127 Sum_probs=88.0
Q ss_pred eeeeeCCccccceEEEEeCCc--cEEEEecCCCC------cchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEE
Q 022304 26 KICPVGGGCINLASRYGTDAG--SFFVKTNRSIG------PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM 97 (299)
Q Consensus 26 ~~~~~~~G~~n~~y~v~~~~g--~~vlK~~~~~~------~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~ 97 (299)
-+..+|.|....||.++..+. -|.+|+-.... ..+.+.|.++|..|. + --.|++|..-++ +...+++|
T Consensus 81 llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lD-H--PFlPTLYa~fet-~~~~cl~m 156 (459)
T KOG0610|consen 81 LLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLD-H--PFLPTLYASFET-DKYSCLVM 156 (459)
T ss_pred HHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcC-C--Cccchhhheeec-cceeEEEE
Confidence 356789999999999998653 56778765421 244677888888774 3 347999976554 57889999
Q ss_pred ecccCCCCCCcHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCCCCHHHHHHHhhhHHHHHHHHhhcCChHHHH
Q 022304 98 EFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQ 177 (299)
Q Consensus 98 e~l~G~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (299)
||++|+++. ...|+.+.. .| .++-..||..
T Consensus 157 eyCpGGdL~----------~LrqkQp~~--~f-----------------se~~aRFYaA--------------------- 186 (459)
T KOG0610|consen 157 EYCPGGDLH----------SLRQKQPGK--RF-----------------SESAARFYAA--------------------- 186 (459)
T ss_pred ecCCCccHH----------HHHhhCCCC--cc-----------------chhhHHHHHH---------------------
Confidence 999997541 112222210 01 1111223321
Q ss_pred HHHHHHHHHhccccCCCCCcceeccCCCCCCeeecCCCCeEEEccc
Q 022304 178 RGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA 223 (299)
Q Consensus 178 ~~~~~~~~l~~~l~~~~~~~~liHgDl~~~Nvl~~~~~~~~iID~~ 223 (299)
+++-.+. +|. -.++|=+||+|.|||+.++|.+.+.||+
T Consensus 187 ---Evl~ALE-YLH----mlGivYRDLKPENILvredGHIMLsDFD 224 (459)
T KOG0610|consen 187 ---EVLLALE-YLH----MLGIVYRDLKPENILVREDGHIMLSDFD 224 (459)
T ss_pred ---HHHHHHH-HHH----hhceeeccCCcceeEEecCCcEEeeecc
Confidence 1111122 222 2589999999999999999999999976
No 115
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=97.97 E-value=0.00013 Score=72.71 Aligned_cols=75 Identities=16% Similarity=0.041 Sum_probs=50.6
Q ss_pred eeeeCCccccceEEEEeCC-c-cEEEEecCCC--C----cchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEe
Q 022304 27 ICPVGGGCINLASRYGTDA-G-SFFVKTNRSI--G----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 98 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~~~-g-~~vlK~~~~~--~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e 98 (299)
++.+|.|..+.||++.... + .+.+|..... . ...+..|..++..+.. -.+++++..... .+..+++|+
T Consensus 7 i~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~H---PNIVkl~~v~~d-~~~lyLVME 82 (932)
T PRK13184 7 IRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIH---PGIVPVYSICSD-GDPVYYTMP 82 (932)
T ss_pred EEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCC---cCcCeEEEEEee-CCEEEEEEE
Confidence 4678888889999987642 3 7888977532 1 2345678877777753 234555554433 568899999
Q ss_pred cccCCCC
Q 022304 99 FIEFGSS 105 (299)
Q Consensus 99 ~l~G~~~ 105 (299)
+++|.++
T Consensus 83 Y~eGGSL 89 (932)
T PRK13184 83 YIEGYTL 89 (932)
T ss_pred cCCCCCH
Confidence 9999744
No 116
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=97.96 E-value=5e-05 Score=67.43 Aligned_cols=73 Identities=18% Similarity=0.128 Sum_probs=47.2
Q ss_pred eeeCCccccceEEEEeC----Cc-cEEEEecCCC-------CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEE
Q 022304 28 CPVGGGCINLASRYGTD----AG-SFFVKTNRSI-------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI 95 (299)
Q Consensus 28 ~~~~~G~~n~~y~v~~~----~g-~~vlK~~~~~-------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~ 95 (299)
+.+|.|..+.||++... .+ .+.+|+.... ....+..|..+++.+.. -.+.+++..... .+..++
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~h---p~iv~~~~~~~~-~~~~~l 77 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKH---PFIVDLIYAFQT-GGKLYL 77 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCC---CchhceeeEEec-CCeEEE
Confidence 56788888999998752 22 6888876421 12335578888877753 123444433322 568899
Q ss_pred EEecccCCC
Q 022304 96 IMEFIEFGS 104 (299)
Q Consensus 96 v~e~l~G~~ 104 (299)
+|||++|..
T Consensus 78 v~e~~~~~~ 86 (323)
T cd05584 78 ILEYLSGGE 86 (323)
T ss_pred EEeCCCCch
Confidence 999999864
No 117
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=97.96 E-value=4.9e-05 Score=67.66 Aligned_cols=74 Identities=9% Similarity=0.042 Sum_probs=47.9
Q ss_pred eeCCccccceEEEEeCCc--cEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEecc
Q 022304 29 PVGGGCINLASRYGTDAG--SFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI 100 (299)
Q Consensus 29 ~~~~G~~n~~y~v~~~~g--~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l 100 (299)
.+|.|..+.||++....+ .+.+|+.... ....+..|..++..+..+ -.+++++..... ....+++||++
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~--~~i~~~~~~~~~-~~~~~lv~e~~ 78 (327)
T cd05617 2 VIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSN--PFLVGLHSCFQT-TSRLFLVIEYV 78 (327)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCC--CCEeeEEEEEEe-CCEEEEEEeCC
Confidence 467888889999986433 6888887631 112355677766666543 234555544332 46789999999
Q ss_pred cCCCC
Q 022304 101 EFGSS 105 (299)
Q Consensus 101 ~G~~~ 105 (299)
+|..+
T Consensus 79 ~~~~L 83 (327)
T cd05617 79 NGGDL 83 (327)
T ss_pred CCCcH
Confidence 98744
No 118
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=97.95 E-value=5.2e-05 Score=67.54 Aligned_cols=74 Identities=9% Similarity=0.023 Sum_probs=48.7
Q ss_pred eeCCccccceEEEEeCC-c-cEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEecc
Q 022304 29 PVGGGCINLASRYGTDA-G-SFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI 100 (299)
Q Consensus 29 ~~~~G~~n~~y~v~~~~-g-~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l 100 (299)
.+|.|..+.||++.... + .|.+|+.... ....+..|..++..+..+ -.+++++..... ....+++|||+
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~h--p~Iv~~~~~~~~-~~~~~lv~e~~ 78 (329)
T cd05588 2 VIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNH--PFLVGLHSCFQT-ESRLFFVIEFV 78 (329)
T ss_pred eEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCC--CCCCceEEEEEc-CCEEEEEEeCC
Confidence 46778788999998743 3 7888977531 123356777777777544 234555544332 46789999999
Q ss_pred cCCCC
Q 022304 101 EFGSS 105 (299)
Q Consensus 101 ~G~~~ 105 (299)
+|..+
T Consensus 79 ~~g~L 83 (329)
T cd05588 79 SGGDL 83 (329)
T ss_pred CCCCH
Confidence 98743
No 119
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=97.95 E-value=8.7e-05 Score=63.48 Aligned_cols=74 Identities=22% Similarity=0.227 Sum_probs=48.8
Q ss_pred eeeeCCccccceEEEEeCCc-cEEEEecCCCC--cchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEecccCC
Q 022304 27 ICPVGGGCINLASRYGTDAG-SFFVKTNRSIG--PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFG 103 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~~~g-~~vlK~~~~~~--~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~ 103 (299)
.+.++.|..+.+|++...++ .+++|...... ...+..|..+++.+... .+.+++.... .+..+++|++++|.
T Consensus 11 ~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~h~---~i~~~~~~~~--~~~~~~v~e~~~~~ 85 (260)
T cd05069 11 DVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGTMMPEAFLQEAQIMKKLRHD---KLVPLYAVVS--EEPIYIVTEFMGKG 85 (260)
T ss_pred eeeecCcCCCeEEEEEEcCCceEEEEEcccCCccHHHHHHHHHHHHhCCCC---CeeeEEEEEc--CCCcEEEEEcCCCC
Confidence 35688888889999976544 78889876422 24466788888877532 1222333322 35679999999886
Q ss_pred CC
Q 022304 104 SS 105 (299)
Q Consensus 104 ~~ 105 (299)
++
T Consensus 86 ~L 87 (260)
T cd05069 86 SL 87 (260)
T ss_pred CH
Confidence 43
No 120
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=97.94 E-value=0.00011 Score=65.55 Aligned_cols=78 Identities=17% Similarity=0.047 Sum_probs=52.6
Q ss_pred eeeeeeeCCccccceEEEEeCC-c-cEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEE
Q 022304 24 ITKICPVGGGCINLASRYGTDA-G-SFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM 97 (299)
Q Consensus 24 ~~~~~~~~~G~~n~~y~v~~~~-g-~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~ 97 (299)
..-++.++.|..+.||++.... + .+.+|+.... ....+..|.+.++.+.. -.+.+++..... .+..+++|
T Consensus 7 y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h---~~iv~~~~~~~~-~~~~~lv~ 82 (331)
T cd06649 7 FERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNS---PYIVGFYGAFYS-DGEISICM 82 (331)
T ss_pred ceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCC---CCCCeEEEEEEE-CCEEEEEe
Confidence 3446778989889999988753 3 6777876532 12446778888877753 234555544332 46789999
Q ss_pred ecccCCCC
Q 022304 98 EFIEFGSS 105 (299)
Q Consensus 98 e~l~G~~~ 105 (299)
||++|..+
T Consensus 83 e~~~~~~L 90 (331)
T cd06649 83 EHMDGGSL 90 (331)
T ss_pred ecCCCCcH
Confidence 99998754
No 121
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=97.94 E-value=8.8e-05 Score=65.87 Aligned_cols=78 Identities=12% Similarity=0.023 Sum_probs=48.7
Q ss_pred eeeeCCccccceEEEEeC--CccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEe
Q 022304 27 ICPVGGGCINLASRYGTD--AGSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 98 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~~--~g~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e 98 (299)
+..+|.|..+.||++... +..|++|+.... ....+..|...+..+.......+.+++..... .+..+++||
T Consensus 4 ~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~-~~~~~lv~E 82 (324)
T cd05589 4 LAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQT-EDHVCFVME 82 (324)
T ss_pred EEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEc-CCEEEEEEc
Confidence 456788888899998764 237888987531 12345566666655543211234445543332 467899999
Q ss_pred cccCCCC
Q 022304 99 FIEFGSS 105 (299)
Q Consensus 99 ~l~G~~~ 105 (299)
+++|..+
T Consensus 83 ~~~~~~L 89 (324)
T cd05589 83 YAAGGDL 89 (324)
T ss_pred CCCCCcH
Confidence 9998743
No 122
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=97.93 E-value=9.2e-05 Score=63.02 Aligned_cols=73 Identities=16% Similarity=0.051 Sum_probs=51.5
Q ss_pred eeeeCCccccceEEEEeCCc--cEEEEecCCCCc-----chHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEec
Q 022304 27 ICPVGGGCINLASRYGTDAG--SFFVKTNRSIGP-----SMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 99 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~~~g--~~vlK~~~~~~~-----~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~ 99 (299)
++.+|.|..+.||++...+. .|++|+...... .....|...++.+. + -.+++++..... ....+++|++
T Consensus 4 ~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~-~--~~i~~~~~~~~~-~~~~~~v~~~ 79 (260)
T PF00069_consen 4 VKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLR-H--PNIVQILDVFQD-DNYLYIVMEY 79 (260)
T ss_dssp EEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHT-B--TTBCHEEEEEEE-SSEEEEEEEE
T ss_pred eEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccc-c--cccccccccccc-cccccccccc
Confidence 46788898899999998644 799999875422 11234788888884 3 235556655433 5678999999
Q ss_pred ccCC
Q 022304 100 IEFG 103 (299)
Q Consensus 100 l~G~ 103 (299)
++|.
T Consensus 80 ~~~~ 83 (260)
T PF00069_consen 80 CPGG 83 (260)
T ss_dssp ETTE
T ss_pred cccc
Confidence 9996
No 123
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=97.93 E-value=0.00014 Score=63.80 Aligned_cols=73 Identities=14% Similarity=0.061 Sum_probs=48.8
Q ss_pred eeeeeCCccccceEEEEeC-C-ccEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEec
Q 022304 26 KICPVGGGCINLASRYGTD-A-GSFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 99 (299)
Q Consensus 26 ~~~~~~~G~~n~~y~v~~~-~-g~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~ 99 (299)
-++.+|.|..+.||++... + ..+++|+.... .......|+.+++.+... .+.+++..... ....+++|||
T Consensus 9 ~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~~~~~~~~-~~~~~lv~e~ 84 (303)
T cd07869 9 KLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHA---NIVLLHDIIHT-KETLTLVFEY 84 (303)
T ss_pred EeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCC---CcCeEEEEEec-CCeEEEEEEC
Confidence 4578888888999999874 3 37888987531 123456788888877532 23444443332 4678999999
Q ss_pred ccC
Q 022304 100 IEF 102 (299)
Q Consensus 100 l~G 102 (299)
++|
T Consensus 85 ~~~ 87 (303)
T cd07869 85 VHT 87 (303)
T ss_pred CCc
Confidence 976
No 124
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=97.92 E-value=0.00024 Score=60.29 Aligned_cols=74 Identities=19% Similarity=0.100 Sum_probs=52.0
Q ss_pred eeeCCccccceEEEEeCC------ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEE
Q 022304 28 CPVGGGCINLASRYGTDA------GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM 97 (299)
Q Consensus 28 ~~~~~G~~n~~y~v~~~~------g~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~ 97 (299)
+.++.|..+.+|++...+ ..+++|...... ...+..|...++.+. + ..+++++..... .+..+++|
T Consensus 5 ~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~-~--~~i~~~~~~~~~-~~~~~~i~ 80 (258)
T smart00219 5 KKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLD-H--PNIVKLLGVCTE-EEPLMIVM 80 (258)
T ss_pred ceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcC-C--CchheEEEEEcC-CCeeEEEE
Confidence 567888888999988754 368889886532 345677888888883 3 245556654433 46889999
Q ss_pred ecccCCCC
Q 022304 98 EFIEFGSS 105 (299)
Q Consensus 98 e~l~G~~~ 105 (299)
++.+|.++
T Consensus 81 e~~~~~~l 88 (258)
T smart00219 81 EYMEGGDL 88 (258)
T ss_pred eccCCCCH
Confidence 99998644
No 125
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=97.92 E-value=0.00014 Score=64.18 Aligned_cols=75 Identities=13% Similarity=0.010 Sum_probs=51.2
Q ss_pred eeeeCCccccceEEEEeCC--ccEEEEecCCCC------cchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEe
Q 022304 27 ICPVGGGCINLASRYGTDA--GSFFVKTNRSIG------PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 98 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~~~--g~~vlK~~~~~~------~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e 98 (299)
...++.|..+.+|++...+ ..|++|...... ...+..|...++.+.. -.+++++..... ....+++||
T Consensus 6 ~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~---~~i~~~~~~~~~-~~~~~lv~e 81 (316)
T cd05574 6 IKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDH---PFLPTLYASFQT-ETYLCLVMD 81 (316)
T ss_pred eeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCC---CCchhheeeeec-CCEEEEEEE
Confidence 4567888888999998753 388999876421 1235667777777753 245666655433 467899999
Q ss_pred cccCCCC
Q 022304 99 FIEFGSS 105 (299)
Q Consensus 99 ~l~G~~~ 105 (299)
++.|..+
T Consensus 82 ~~~~~~L 88 (316)
T cd05574 82 YCPGGEL 88 (316)
T ss_pred ecCCCCH
Confidence 9998743
No 126
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=97.92 E-value=0.00025 Score=61.73 Aligned_cols=75 Identities=16% Similarity=0.109 Sum_probs=49.3
Q ss_pred eeeeCCccccceEEEEeCC-c-cEEEEecCCCCc---chHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEeccc
Q 022304 27 ICPVGGGCINLASRYGTDA-G-SFFVKTNRSIGP---SMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE 101 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~~~-g-~~vlK~~~~~~~---~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~ 101 (299)
+..++.|..+.+|++.... + .+++|....... ..+..|...++.+.. -.+++++..... ++..+++|+|++
T Consensus 17 ~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~lv~e~~~ 92 (292)
T cd06644 17 IGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNH---PYIVKLLGAFYW-DGKLWIMIEFCP 92 (292)
T ss_pred hheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCC---CcEeeeEEEEEe-CCeEEEEEecCC
Confidence 4567888888999998754 3 788888764322 234567766666642 234555544332 568999999999
Q ss_pred CCCC
Q 022304 102 FGSS 105 (299)
Q Consensus 102 G~~~ 105 (299)
|..+
T Consensus 93 ~~~l 96 (292)
T cd06644 93 GGAV 96 (292)
T ss_pred CCcH
Confidence 8743
No 127
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=97.92 E-value=8e-05 Score=66.13 Aligned_cols=76 Identities=12% Similarity=0.047 Sum_probs=47.7
Q ss_pred eeeeCCccccceEEEEeC-Cc-cEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEe
Q 022304 27 ICPVGGGCINLASRYGTD-AG-SFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 98 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~~-~g-~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e 98 (299)
...+|.|..+.||++... ++ .|.+|+.... ....+..|..++..+..+ -.+++++..... .+..+++||
T Consensus 5 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~--~~i~~~~~~~~~-~~~~~lv~E 81 (323)
T cd05615 5 LMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKP--PFLTQLHSCFQT-VDRLYFVME 81 (323)
T ss_pred EEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCC--CchhheeeEEec-CCEEEEEEc
Confidence 456788888999998764 33 7888977531 112244566666555432 234555543322 467899999
Q ss_pred cccCCCC
Q 022304 99 FIEFGSS 105 (299)
Q Consensus 99 ~l~G~~~ 105 (299)
|++|..+
T Consensus 82 y~~~g~L 88 (323)
T cd05615 82 YVNGGDL 88 (323)
T ss_pred CCCCCcH
Confidence 9998743
No 128
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=97.92 E-value=0.00022 Score=61.82 Aligned_cols=77 Identities=17% Similarity=0.091 Sum_probs=52.0
Q ss_pred eeeeCCccccceEEEEeCC--ccEEEEecCCC--CcchHHHHHHHHHHHHhcCCCCCccceeeccc---C-CCceEEEEe
Q 022304 27 ICPVGGGCINLASRYGTDA--GSFFVKTNRSI--GPSMFEGEALGLGAMYETRTIRAPRPFKVGAL---P-TGGSYIIME 98 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~~~--g~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~---~-~~~~~~v~e 98 (299)
++.++.|..+.+|++.... ..+.+|+.... ....+..|...++.+.++ ..+++++..... . .+..+++||
T Consensus 23 ~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~e~~~l~~l~~h--~~i~~~~~~~~~~~~~~~~~~~lv~e 100 (286)
T cd06638 23 IETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDIDEEIEAEYNILKALSDH--PNVVKFYGMYYKKDVKNGDQLWLVLE 100 (286)
T ss_pred eeeeccCCCcEEEEEEECCCCceeEEEeeccccchHHHHHHHHHHHHHHhcC--CCeeeeeeeeeecccCCCCeEEEEEe
Confidence 4678888888999987632 37888986542 224567788888888654 245555543211 1 346899999
Q ss_pred cccCCCC
Q 022304 99 FIEFGSS 105 (299)
Q Consensus 99 ~l~G~~~ 105 (299)
|++|..+
T Consensus 101 ~~~~~~L 107 (286)
T cd06638 101 LCNGGSV 107 (286)
T ss_pred ecCCCCH
Confidence 9999754
No 129
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=97.92 E-value=6.8e-05 Score=66.80 Aligned_cols=74 Identities=8% Similarity=0.017 Sum_probs=47.1
Q ss_pred eeCCccccceEEEEeCC-c-cEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEecc
Q 022304 29 PVGGGCINLASRYGTDA-G-SFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI 100 (299)
Q Consensus 29 ~~~~G~~n~~y~v~~~~-g-~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l 100 (299)
.+|.|..+.||++.... + .|.+|+.... ....+..|..++..+..+ -.+++++..... .+..+++|||+
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~h--p~iv~~~~~~~~-~~~~~lv~E~~ 78 (329)
T cd05618 2 VIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNH--PFLVGLHSCFQT-ESRLFFVIEYV 78 (329)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCC--CcCCceeeEEEe-CCEEEEEEeCC
Confidence 46778889999988643 3 6888877531 112345676666655443 234455544332 56889999999
Q ss_pred cCCCC
Q 022304 101 EFGSS 105 (299)
Q Consensus 101 ~G~~~ 105 (299)
+|..+
T Consensus 79 ~~~~L 83 (329)
T cd05618 79 NGGDL 83 (329)
T ss_pred CCCCH
Confidence 98743
No 130
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=97.92 E-value=0.00012 Score=64.54 Aligned_cols=74 Identities=12% Similarity=0.079 Sum_probs=48.7
Q ss_pred eeeeeeCCccccceEEEEeC--CccEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEe
Q 022304 25 TKICPVGGGCINLASRYGTD--AGSFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 98 (299)
Q Consensus 25 ~~~~~~~~G~~n~~y~v~~~--~g~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e 98 (299)
.-++.++.|..+.||+.+.. +..+++|..... .......|...++.+.. -.+.+++..... ++..+++||
T Consensus 9 ~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h---~~iv~~~~~~~~-~~~~~lv~e 84 (309)
T cd07872 9 IKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKH---ANIVTLHDIVHT-DKSLTLVFE 84 (309)
T ss_pred EEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCC---CCcceEEEEEee-CCeEEEEEe
Confidence 34678888888999998763 336888876521 12335578888877743 234455544332 567899999
Q ss_pred cccC
Q 022304 99 FIEF 102 (299)
Q Consensus 99 ~l~G 102 (299)
|+++
T Consensus 85 ~~~~ 88 (309)
T cd07872 85 YLDK 88 (309)
T ss_pred CCCC
Confidence 9875
No 131
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=97.91 E-value=0.00016 Score=61.80 Aligned_cols=78 Identities=22% Similarity=0.149 Sum_probs=52.0
Q ss_pred eeeeeeeCCccccceEEEEeCCc-cEEEEecCCC--CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEecc
Q 022304 24 ITKICPVGGGCINLASRYGTDAG-SFFVKTNRSI--GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI 100 (299)
Q Consensus 24 ~~~~~~~~~G~~n~~y~v~~~~g-~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l 100 (299)
..-+++++.|..+.+|+....++ .+++|..... ....+..|..+++.+.. -.+.+++..... .+..+++++++
T Consensus 8 ~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~lv~e~~ 83 (261)
T cd05072 8 IKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQH---DKLVRLYAVVTK-EEPIYIITEYM 83 (261)
T ss_pred eEEeeecCCcCCceEEEEEecCCceEEEEEccCCchhHHHHHHHHHHHHhCCC---CCeeeEEEEEcC-CCCcEEEEecC
Confidence 34467888888889999876544 7888876532 23456678888877753 234444443332 46789999999
Q ss_pred cCCCC
Q 022304 101 EFGSS 105 (299)
Q Consensus 101 ~G~~~ 105 (299)
+|.++
T Consensus 84 ~~~~L 88 (261)
T cd05072 84 AKGSL 88 (261)
T ss_pred CCCcH
Confidence 98644
No 132
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=97.91 E-value=8.9e-05 Score=65.65 Aligned_cols=74 Identities=15% Similarity=0.083 Sum_probs=44.7
Q ss_pred eeCCccccceEEEEeCC-c-cEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEecc
Q 022304 29 PVGGGCINLASRYGTDA-G-SFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI 100 (299)
Q Consensus 29 ~~~~G~~n~~y~v~~~~-g-~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l 100 (299)
.+|.|..+.||++...+ + .|++|..... .......|..++..+..+ -.+++++..... .+..+++|||+
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h--p~i~~~~~~~~~-~~~~~lv~e~~ 78 (316)
T cd05592 2 VLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEH--PFLTHLFCTFQT-KEHLFFVMEYL 78 (316)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCC--CCccceeeEEEc-CCEEEEEEcCC
Confidence 46778889999998643 3 6888876531 112233455544433333 234555544332 46789999999
Q ss_pred cCCCC
Q 022304 101 EFGSS 105 (299)
Q Consensus 101 ~G~~~ 105 (299)
+|..+
T Consensus 79 ~gg~L 83 (316)
T cd05592 79 NGGDL 83 (316)
T ss_pred CCCcH
Confidence 98743
No 133
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=97.90 E-value=0.0001 Score=72.13 Aligned_cols=75 Identities=13% Similarity=0.125 Sum_probs=49.6
Q ss_pred eeeeCCccccceEEEEeC--CccEEEEecCCCC------cchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEe
Q 022304 27 ICPVGGGCINLASRYGTD--AGSFFVKTNRSIG------PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 98 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~~--~g~~vlK~~~~~~------~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e 98 (299)
++.++.|..+.||++... +..|.+|+..... ...+..|...+..+.. -.+.+++..... .+..+++||
T Consensus 9 ~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~h---p~Iv~~~~~~~~-~~~~~lVmE 84 (669)
T cd05610 9 VKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKS---PFIVHLYYSLQS-ANNVYLVME 84 (669)
T ss_pred EEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCC---CCcCeEEEEEEE-CCEEEEEEe
Confidence 577888888999999875 3378889876421 1345667777766643 123444443332 467899999
Q ss_pred cccCCCC
Q 022304 99 FIEFGSS 105 (299)
Q Consensus 99 ~l~G~~~ 105 (299)
|++|..+
T Consensus 85 y~~g~~L 91 (669)
T cd05610 85 YLIGGDV 91 (669)
T ss_pred CCCCCCH
Confidence 9998644
No 134
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=97.90 E-value=6e-05 Score=65.84 Aligned_cols=75 Identities=17% Similarity=0.083 Sum_probs=49.0
Q ss_pred eeeeCCccccceEEEEeC--CccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEe
Q 022304 27 ICPVGGGCINLASRYGTD--AGSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 98 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~~--~g~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e 98 (299)
++.++.|..+.||++... +..+++|..... ....+..|..+++.+.. -.+.+++..... ....+++||
T Consensus 6 ~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~h---p~iv~~~~~~~~-~~~~~lv~e 81 (291)
T cd05612 6 IKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSH---PFIIRLFWTEHD-QRFLYMLME 81 (291)
T ss_pred eeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCC---CcHhhhHhhhcc-CCeEEEEEe
Confidence 467888888999999864 337888976421 12345678877777643 123444433322 467899999
Q ss_pred cccCCCC
Q 022304 99 FIEFGSS 105 (299)
Q Consensus 99 ~l~G~~~ 105 (299)
|++|..+
T Consensus 82 ~~~~~~L 88 (291)
T cd05612 82 YVPGGEL 88 (291)
T ss_pred CCCCCCH
Confidence 9998643
No 135
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=97.90 E-value=7.9e-05 Score=66.17 Aligned_cols=73 Identities=14% Similarity=-0.001 Sum_probs=46.0
Q ss_pred eeCCccccceEEEEeC-Cc-cEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEecc
Q 022304 29 PVGGGCINLASRYGTD-AG-SFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI 100 (299)
Q Consensus 29 ~~~~G~~n~~y~v~~~-~g-~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l 100 (299)
.+|.|..+.||++... +| .|++|+.... ....+..|..+++.+.. -.+++++..... .+..+++|||+
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~h---p~i~~~~~~~~~-~~~~~lv~E~~ 77 (323)
T cd05595 2 LLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH---PFLTALKYAFQT-HDRLCFVMEYA 77 (323)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCC---CCCcceeeEEec-CCEEEEEEeCC
Confidence 4677888899998863 33 7888987531 11234467777766643 134444433322 46889999999
Q ss_pred cCCCC
Q 022304 101 EFGSS 105 (299)
Q Consensus 101 ~G~~~ 105 (299)
+|..+
T Consensus 78 ~~~~L 82 (323)
T cd05595 78 NGGEL 82 (323)
T ss_pred CCCcH
Confidence 98743
No 136
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=97.89 E-value=0.0002 Score=61.03 Aligned_cols=76 Identities=18% Similarity=0.134 Sum_probs=52.2
Q ss_pred eeeeeCCccccceEEEEeCCc-cEEEEecCCC--CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEecccC
Q 022304 26 KICPVGGGCINLASRYGTDAG-SFFVKTNRSI--GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEF 102 (299)
Q Consensus 26 ~~~~~~~G~~n~~y~v~~~~g-~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G 102 (299)
-.+.++.|..+.+|+++..++ .+.+|..... ....+..|+..++.+.. -.+.+++..... .+..+++|+|++|
T Consensus 8 ~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~iv~e~~~~ 83 (256)
T cd05114 8 FMKELGSGQFGVVHLGKWRAQIKVAIKAINEGAMSEEDFIEEAKVMMKLSH---PKLVQLYGVCTQ-QKPLYIVTEFMEN 83 (256)
T ss_pred EeeEecCCcCceEEEEEeccCceEEEEecccCCccHHHHHHHHHHHHHCCC---CCceeEEEEEcc-CCCEEEEEEcCCC
Confidence 356788888899999887655 7888876542 23456778888888753 223444544332 4678999999998
Q ss_pred CCC
Q 022304 103 GSS 105 (299)
Q Consensus 103 ~~~ 105 (299)
..+
T Consensus 84 ~~L 86 (256)
T cd05114 84 GCL 86 (256)
T ss_pred CcH
Confidence 744
No 137
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=97.89 E-value=8.6e-05 Score=65.87 Aligned_cols=76 Identities=12% Similarity=0.032 Sum_probs=45.5
Q ss_pred eeeeCCccccceEEEEeCC-c-cEEEEecCCC---C---cchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEe
Q 022304 27 ICPVGGGCINLASRYGTDA-G-SFFVKTNRSI---G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 98 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~~~-g-~~vlK~~~~~---~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e 98 (299)
+..+|.|..+.||++...+ + .+.+|+.... . ......|..++..+..+ -.+++++..... .+..+++||
T Consensus 5 ~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~--~~i~~~~~~~~~-~~~~~lv~E 81 (323)
T cd05616 5 LMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKP--PFLTQLHSCFQT-MDRLYFVME 81 (323)
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCC--CeEeeEEEEEec-CCEEEEEEc
Confidence 4568888889999987643 3 7888976531 1 11233455555444322 223444443322 467899999
Q ss_pred cccCCCC
Q 022304 99 FIEFGSS 105 (299)
Q Consensus 99 ~l~G~~~ 105 (299)
|++|..+
T Consensus 82 ~~~~g~L 88 (323)
T cd05616 82 YVNGGDL 88 (323)
T ss_pred CCCCCCH
Confidence 9998743
No 138
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=97.89 E-value=0.00026 Score=62.86 Aligned_cols=72 Identities=13% Similarity=-0.015 Sum_probs=44.1
Q ss_pred eeCCccccceEEEEeC-Cc-cEEEEecCCC---C---cchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEecc
Q 022304 29 PVGGGCINLASRYGTD-AG-SFFVKTNRSI---G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI 100 (299)
Q Consensus 29 ~~~~G~~n~~y~v~~~-~g-~~vlK~~~~~---~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l 100 (299)
.+|.|..+.||++... .+ .+.+|+.... . ...+..|...+..+.. -.+++++..... .+..+++|||+
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~h---p~i~~~~~~~~~-~~~~~lv~E~~ 77 (325)
T cd05594 2 LLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH---PFLTALKYSFQT-HDRLCFVMEYA 77 (325)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCC---CCCCceEEEEEc-CCEEEEEEeCC
Confidence 4677888899998753 33 7888887531 1 1223445555555432 234445443332 46789999999
Q ss_pred cCCC
Q 022304 101 EFGS 104 (299)
Q Consensus 101 ~G~~ 104 (299)
+|..
T Consensus 78 ~~~~ 81 (325)
T cd05594 78 NGGE 81 (325)
T ss_pred CCCc
Confidence 9864
No 139
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=97.89 E-value=0.0001 Score=66.79 Aligned_cols=76 Identities=13% Similarity=0.062 Sum_probs=49.4
Q ss_pred eeeeeCCccccceEEEEeCC--ccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEE
Q 022304 26 KICPVGGGCINLASRYGTDA--GSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM 97 (299)
Q Consensus 26 ~~~~~~~G~~n~~y~v~~~~--g~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~ 97 (299)
-++.+|.|..+.||++.... ..|++|+.... ....+..|..+++.+.. -.+++++..... ....+++|
T Consensus 47 ~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h---~~iv~~~~~~~~-~~~~~lv~ 122 (370)
T cd05596 47 VIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANS---EWIVQLHYAFQD-DKYLYMVM 122 (370)
T ss_pred EEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCC---CCcceEEEEEec-CCEEEEEE
Confidence 35678888889999987642 37888976421 12335567777777643 234444443322 45789999
Q ss_pred ecccCCCC
Q 022304 98 EFIEFGSS 105 (299)
Q Consensus 98 e~l~G~~~ 105 (299)
||++|..+
T Consensus 123 Ey~~gg~L 130 (370)
T cd05596 123 EYMPGGDL 130 (370)
T ss_pred cCCCCCcH
Confidence 99998744
No 140
>PRK10345 hypothetical protein; Provisional
Probab=97.88 E-value=0.00012 Score=60.84 Aligned_cols=77 Identities=16% Similarity=0.160 Sum_probs=49.8
Q ss_pred eeeeeeeCCccccceEEEEeCCccEEEEecCCC---CcchHHHHHHHHHHHHhcC--CCCCccceeecccCC--CceE-E
Q 022304 24 ITKICPVGGGCINLASRYGTDAGSFFVKTNRSI---GPSMFEGEALGLGAMYETR--TIRAPRPFKVGALPT--GGSY-I 95 (299)
Q Consensus 24 ~~~~~~~~~G~~n~~y~v~~~~g~~vlK~~~~~---~~~~~~~E~~~l~~L~~~~--~~~vP~~~~~~~~~~--~~~~-~ 95 (299)
..+.+.+|.|....||+ ...++..++|+.... ....+.+|+..++.|.... --.+++++.+-.+.. |..+ +
T Consensus 4 L~~~~~LG~G~~~~Vy~-hp~~~~k~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~ 82 (210)
T PRK10345 4 LSEQSPLGTGRHRKCYA-HPEDAQRCIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDV 82 (210)
T ss_pred cCCcceecCCCceEEEE-CCCCcCeEEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEE
Confidence 34567899999889996 444555678876532 2355789999999996421 124677776655432 3323 6
Q ss_pred EEecccC
Q 022304 96 IMEFIEF 102 (299)
Q Consensus 96 v~e~l~G 102 (299)
++++ +|
T Consensus 83 I~e~-~G 88 (210)
T PRK10345 83 IADF-DG 88 (210)
T ss_pred EecC-CC
Confidence 7888 45
No 141
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=97.88 E-value=0.00012 Score=65.31 Aligned_cols=75 Identities=13% Similarity=0.014 Sum_probs=45.4
Q ss_pred eeeeCCccccceEEEEeCC--ccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEe
Q 022304 27 ICPVGGGCINLASRYGTDA--GSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 98 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~~~--g~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e 98 (299)
++.+|.|..+.||++.... ..|.+|+.... ....+..|..++..+.. --+++++..... .+..|++||
T Consensus 6 ~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~---~~i~~l~~~~~~-~~~~~lv~E 81 (331)
T cd05624 6 IKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDC---QWITTLHYAFQD-ENYLYLVMD 81 (331)
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCC---CCEeeEEEEEEc-CCEEEEEEe
Confidence 4678888889999988643 36888976431 11223445555443321 123444433322 467899999
Q ss_pred cccCCCC
Q 022304 99 FIEFGSS 105 (299)
Q Consensus 99 ~l~G~~~ 105 (299)
|++|..+
T Consensus 82 y~~gg~L 88 (331)
T cd05624 82 YYVGGDL 88 (331)
T ss_pred CCCCCcH
Confidence 9999744
No 142
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=97.87 E-value=0.00018 Score=60.96 Aligned_cols=73 Identities=25% Similarity=0.143 Sum_probs=48.4
Q ss_pred eeCCccccceEEEEeCCc-cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEecccCC
Q 022304 29 PVGGGCINLASRYGTDAG-SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFG 103 (299)
Q Consensus 29 ~~~~G~~n~~y~v~~~~g-~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~ 103 (299)
.++.|..+.+|++...++ .+.+|...... ...+..|...++.+.. -.+++++..... ....++++++++|.
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~---~~i~~~~~~~~~-~~~~~~v~e~~~~~ 77 (251)
T cd05041 2 KIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDH---PNIVKLIGVCVQ-KQPIYIVMELVPGG 77 (251)
T ss_pred ccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCC---CCeEEEEEEEec-CCCeEEEEEcCCCC
Confidence 567777789999887544 88899876422 2345677777776642 134445544332 46789999999987
Q ss_pred CC
Q 022304 104 SS 105 (299)
Q Consensus 104 ~~ 105 (299)
++
T Consensus 78 ~l 79 (251)
T cd05041 78 SL 79 (251)
T ss_pred cH
Confidence 43
No 143
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=97.87 E-value=0.00012 Score=64.87 Aligned_cols=74 Identities=18% Similarity=0.113 Sum_probs=45.6
Q ss_pred eeCCccccceEEEEeC-Cc-cEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEecc
Q 022304 29 PVGGGCINLASRYGTD-AG-SFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI 100 (299)
Q Consensus 29 ~~~~G~~n~~y~v~~~-~g-~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l 100 (299)
.+|.|..+.||++... .| .+.+|+.... .......|..++..+..+ ..+++++..... .+..+++|||+
T Consensus 2 ~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~--~~i~~~~~~~~~-~~~~~lv~E~~ 78 (316)
T cd05620 2 VLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWEN--PFLTHLYCTFQT-KEHLFFVMEFL 78 (316)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCC--CCccCeeEEEEe-CCEEEEEECCC
Confidence 4677888899999864 23 7888877531 112234555555444333 234555544332 56889999999
Q ss_pred cCCCC
Q 022304 101 EFGSS 105 (299)
Q Consensus 101 ~G~~~ 105 (299)
+|..+
T Consensus 79 ~~g~L 83 (316)
T cd05620 79 NGGDL 83 (316)
T ss_pred CCCcH
Confidence 98643
No 144
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=97.87 E-value=8e-05 Score=66.07 Aligned_cols=74 Identities=15% Similarity=0.114 Sum_probs=52.2
Q ss_pred eeeCCccccceEEEEeCC-c-cEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEecc
Q 022304 28 CPVGGGCINLASRYGTDA-G-SFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI 100 (299)
Q Consensus 28 ~~~~~G~~n~~y~v~~~~-g-~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l 100 (299)
+++|.|....||+-...+ + .+.+|.-... ..+.+..|+.+|+.|.. ..+-+++.+... .+..|+||||+
T Consensus 16 ~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H---~nIV~l~d~~~~-~~~i~lVMEyC 91 (429)
T KOG0595|consen 16 REIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKH---PNIVRLLDCIED-DDFIYLVMEYC 91 (429)
T ss_pred hhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCC---cceeeEEEEEec-CCeEEEEEEeC
Confidence 458999999999977643 3 6677765432 23556789999988863 234555555444 57899999999
Q ss_pred cCCCC
Q 022304 101 EFGSS 105 (299)
Q Consensus 101 ~G~~~ 105 (299)
+|+++
T Consensus 92 ~gGDL 96 (429)
T KOG0595|consen 92 NGGDL 96 (429)
T ss_pred CCCCH
Confidence 99855
No 145
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=97.86 E-value=0.00012 Score=62.40 Aligned_cols=74 Identities=19% Similarity=0.140 Sum_probs=49.7
Q ss_pred eeeeCCccccceEEEEeCCccEEEEecCCC-CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEecccCCCC
Q 022304 27 ICPVGGGCINLASRYGTDAGSFFVKTNRSI-GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSS 105 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~~~g~~vlK~~~~~-~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~~~ 105 (299)
.+.++.|..+.+|+....+..+++|..... ....+..|...++.+.. -.+.+.+.... ....+++|++++|.++
T Consensus 11 ~~~lg~g~~g~v~~~~~~~~~~~iK~~~~~~~~~~~~~e~~~l~~~~~---~~i~~~~~~~~--~~~~~~v~e~~~~~~L 85 (254)
T cd05083 11 GEIIGEGEFGAVLQGEYTGQKVAVKNIKCDVTAQAFLEETAVMTKLHH---KNLVRLLGVIL--HNGLYIVMELMSKGNL 85 (254)
T ss_pred eeeeccCCCCceEecccCCCceEEEeecCcchHHHHHHHHHHHHhCCC---CCcCeEEEEEc--CCCcEEEEECCCCCCH
Confidence 356777878899988766668999988643 33456778887777753 23344443322 3457999999998744
No 146
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=97.86 E-value=8.2e-05 Score=64.23 Aligned_cols=74 Identities=19% Similarity=0.137 Sum_probs=49.9
Q ss_pred eeeCCccccceEEEEeCC-------ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEE
Q 022304 28 CPVGGGCINLASRYGTDA-------GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII 96 (299)
Q Consensus 28 ~~~~~G~~n~~y~v~~~~-------g~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v 96 (299)
+.++.|..+.+|++...+ ..+.+|...... ...+..|++.++.+.. -.+.+++..... .+..+++
T Consensus 11 ~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~---~~i~~~~~~~~~-~~~~~lv 86 (280)
T cd05049 11 RELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQH---ENIVKFYGVCTE-GDPPIMV 86 (280)
T ss_pred hhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCC---CCchheeeEEec-CCCeEEE
Confidence 567777778899886522 368888876422 2456778888887753 234555554433 4678999
Q ss_pred EecccCCCC
Q 022304 97 MEFIEFGSS 105 (299)
Q Consensus 97 ~e~l~G~~~ 105 (299)
|++++|.++
T Consensus 87 ~e~~~~~~L 95 (280)
T cd05049 87 FEYMEHGDL 95 (280)
T ss_pred EecCCCCCH
Confidence 999999754
No 147
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=97.86 E-value=0.00024 Score=60.46 Aligned_cols=75 Identities=17% Similarity=0.111 Sum_probs=51.3
Q ss_pred eeeeCCccccceEEEEeCCccEEEEecCCCC--cchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEecccCCC
Q 022304 27 ICPVGGGCINLASRYGTDAGSFFVKTNRSIG--PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGS 104 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~~~g~~vlK~~~~~~--~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~~ 104 (299)
.+.++.|..+.||+....+..+++|...... ...+..|...++.+... .+.+++..... .+..+++||+.+|.+
T Consensus 11 ~~~ig~g~~g~v~~~~~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~~~---~i~~~~~~~~~-~~~~~~v~e~~~~~~ 86 (256)
T cd05039 11 GATIGKGEFGDVMLGDYRGQKVAVKCLKDDSTAAQAFLAEASVMTTLRHP---NLVQLLGVVLQ-GNPLYIVTEYMAKGS 86 (256)
T ss_pred eeeeecCCCceEEEEEecCcEEEEEEeccchhHHHHHHHHHHHHHhcCCc---ceeeeEEEEcC-CCCeEEEEEecCCCc
Confidence 4567888888999998877789999887532 23466788877777532 23344443322 467899999998864
Q ss_pred C
Q 022304 105 S 105 (299)
Q Consensus 105 ~ 105 (299)
+
T Consensus 87 L 87 (256)
T cd05039 87 L 87 (256)
T ss_pred H
Confidence 3
No 148
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=97.85 E-value=0.00017 Score=65.41 Aligned_cols=76 Identities=13% Similarity=0.084 Sum_probs=48.1
Q ss_pred eeeeeCCccccceEEEEeCC-c-cEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEE
Q 022304 26 KICPVGGGCINLASRYGTDA-G-SFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM 97 (299)
Q Consensus 26 ~~~~~~~G~~n~~y~v~~~~-g-~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~ 97 (299)
-+..+|.|..+.||++.... + .+.+|+.... ....+..|..+++.+.. -.+.+++..... ....+++|
T Consensus 47 ~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~h---p~iv~~~~~~~~-~~~~~lv~ 122 (370)
T cd05621 47 VVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANS---PWVVQLFCAFQD-DKYLYMVM 122 (370)
T ss_pred EEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCC---CCEeeEEEEEEc-CCEEEEEE
Confidence 35678888889999988743 3 6788876421 12235567766665532 233444433222 46789999
Q ss_pred ecccCCCC
Q 022304 98 EFIEFGSS 105 (299)
Q Consensus 98 e~l~G~~~ 105 (299)
||++|..+
T Consensus 123 Ey~~gg~L 130 (370)
T cd05621 123 EYMPGGDL 130 (370)
T ss_pred cCCCCCcH
Confidence 99999744
No 149
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=97.85 E-value=6.2e-05 Score=65.93 Aligned_cols=136 Identities=21% Similarity=0.236 Sum_probs=81.2
Q ss_pred ceeeeeeeCCccccceEEEEeC-Cc-cEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCCccceee-ccc-CCC-ce
Q 022304 23 HITKICPVGGGCINLASRYGTD-AG-SFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKV-GAL-PTG-GS 93 (299)
Q Consensus 23 ~~~~~~~~~~G~~n~~y~v~~~-~g-~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~-~~~-~~~-~~ 93 (299)
++..+..+|.|....||++... .+ -|.+|.-.-. .+..+.+|.++++.- ..|-++.+ +.. .++ ..
T Consensus 80 dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~------~spyIV~~ygaF~~~~~~i 153 (364)
T KOG0581|consen 80 DLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSC------QSPYIVGFYGAFYSNGEEI 153 (364)
T ss_pred HhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhC------CCCCeeeEeEEEEeCCceE
Confidence 3445667889988999999864 33 5666766322 134456677665443 34555532 221 146 48
Q ss_pred EEEEecccCCCCCCcHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCCCCHHHHHHHhhhHHHHHHHHhhcCCh
Q 022304 94 YIIMEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDS 173 (299)
Q Consensus 94 ~~v~e~l~G~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (299)
.++|||.+|+.++ ..+.+. . ..+ + ..+
T Consensus 154 sI~mEYMDgGSLd-------~~~k~~----g--------------~i~------E------------~~L---------- 180 (364)
T KOG0581|consen 154 SICMEYMDGGSLD-------DILKRV----G--------------RIP------E------------PVL---------- 180 (364)
T ss_pred EeehhhcCCCCHH-------HHHhhc----C--------------CCC------H------------HHH----------
Confidence 9999999998552 122211 0 000 0 001
Q ss_pred HHHHHHHHHHHHHhccccCCCCCcceeccCCCCCCeeecCCCCeEEEccc
Q 022304 174 TIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA 223 (299)
Q Consensus 174 ~~~~~~~~~~~~l~~~l~~~~~~~~liHgDl~~~Nvl~~~~~~~~iID~~ 223 (299)
.....+++..+..+. ....+||+|++|.|+|+...|++.|.||.
T Consensus 181 --~~ia~~VL~GL~YLh----~~~~IIHRDIKPsNlLvNskGeVKicDFG 224 (364)
T KOG0581|consen 181 --GKIARAVLRGLSYLH----EERKIIHRDIKPSNLLVNSKGEVKICDFG 224 (364)
T ss_pred --HHHHHHHHHHHHHHh----hccCeeeccCCHHHeeeccCCCEEecccc
Confidence 011123344444332 24789999999999999888889999985
No 150
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=97.85 E-value=0.0001 Score=65.65 Aligned_cols=73 Identities=12% Similarity=0.004 Sum_probs=45.3
Q ss_pred eeCCccccceEEEEeC-Cc-cEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEecc
Q 022304 29 PVGGGCINLASRYGTD-AG-SFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI 100 (299)
Q Consensus 29 ~~~~G~~n~~y~v~~~-~g-~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l 100 (299)
.+|.|..+.||++... .+ .|++|+.... ....+..|..+++.+.. -.+++++..... .+..+++|||+
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~h---p~iv~~~~~~~~-~~~~~lv~Ey~ 77 (328)
T cd05593 2 LLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRH---PFLTSLKYSFQT-KDRLCFVMEYV 77 (328)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCC---CCCcceEEEEEc-CCEEEEEEeCC
Confidence 4677888899998864 33 7888987531 11234456666665532 123444433322 46789999999
Q ss_pred cCCCC
Q 022304 101 EFGSS 105 (299)
Q Consensus 101 ~G~~~ 105 (299)
+|..+
T Consensus 78 ~~g~L 82 (328)
T cd05593 78 NGGEL 82 (328)
T ss_pred CCCCH
Confidence 98643
No 151
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=97.84 E-value=0.00021 Score=61.00 Aligned_cols=74 Identities=23% Similarity=0.235 Sum_probs=51.1
Q ss_pred eeeeCCccccceEEEEeCCc-cEEEEecCCC--CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEecccCC
Q 022304 27 ICPVGGGCINLASRYGTDAG-SFFVKTNRSI--GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFG 103 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~~~g-~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~ 103 (299)
++.++.|..+.+|++...++ .+++|..... ....+..|..+++.+... .+++++.... .+..++++++++|.
T Consensus 11 ~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~h~---~i~~~~~~~~--~~~~~~v~e~~~~~ 85 (260)
T cd05067 11 VKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSMSPEAFLAEANLMKQLQHP---RLVRLYAVVT--QEPIYIITEYMENG 85 (260)
T ss_pred eeeeccCccceEEeeecCCCceEEEEEecCCCCcHHHHHHHHHHHHhcCCc---CeeeEEEEEc--cCCcEEEEEcCCCC
Confidence 46788888899999987555 8889977642 234567788888888532 2344443321 45789999999887
Q ss_pred CC
Q 022304 104 SS 105 (299)
Q Consensus 104 ~~ 105 (299)
++
T Consensus 86 ~L 87 (260)
T cd05067 86 SL 87 (260)
T ss_pred CH
Confidence 44
No 152
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=97.83 E-value=0.00014 Score=64.35 Aligned_cols=74 Identities=14% Similarity=0.074 Sum_probs=45.5
Q ss_pred eeCCccccceEEEEeCC-c-cEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEecc
Q 022304 29 PVGGGCINLASRYGTDA-G-SFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI 100 (299)
Q Consensus 29 ~~~~G~~n~~y~v~~~~-g-~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l 100 (299)
.+|.|..+.||++...+ + .|++|+.... .......|..++..+..+ -.+++++..... .+..+++|||+
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h--p~iv~~~~~~~~-~~~~~lv~ey~ 78 (316)
T cd05619 2 MLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEH--PFLTHLYCTFQT-KENLFFVMEYL 78 (316)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCC--CcCcceEEEEEe-CCEEEEEEeCC
Confidence 46778888999998643 3 6888976531 112234455555444333 234445544333 46789999999
Q ss_pred cCCCC
Q 022304 101 EFGSS 105 (299)
Q Consensus 101 ~G~~~ 105 (299)
+|..+
T Consensus 79 ~~g~L 83 (316)
T cd05619 79 NGGDL 83 (316)
T ss_pred CCCcH
Confidence 98744
No 153
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=97.83 E-value=0.00014 Score=65.08 Aligned_cols=75 Identities=13% Similarity=0.021 Sum_probs=49.5
Q ss_pred eeeeCCccccceEEEEeC-Cc--cEEEEecCC------CCcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEE
Q 022304 27 ICPVGGGCINLASRYGTD-AG--SFFVKTNRS------IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM 97 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~~-~g--~~vlK~~~~------~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~ 97 (299)
++.+|.|..+.||++... .+ .+.+|.... .....+..|..+++.+.. -.+++++..... .+..+++|
T Consensus 35 ~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h---p~Iv~~~~~~~~-~~~~~lv~ 110 (340)
T PTZ00426 35 IRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINH---PFCVNLYGSFKD-ESYLYLVL 110 (340)
T ss_pred EEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCC---CCCcceEEEEEe-CCEEEEEE
Confidence 577888988999998742 22 688887642 112345678888877753 234455544332 46789999
Q ss_pred ecccCCCC
Q 022304 98 EFIEFGSS 105 (299)
Q Consensus 98 e~l~G~~~ 105 (299)
||++|..+
T Consensus 111 Ey~~~g~L 118 (340)
T PTZ00426 111 EFVIGGEF 118 (340)
T ss_pred eCCCCCcH
Confidence 99998744
No 154
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=97.83 E-value=0.00018 Score=61.35 Aligned_cols=75 Identities=20% Similarity=0.155 Sum_probs=51.6
Q ss_pred eeeeCCccccceEEEEeCCc-cEEEEecCCC--CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEecccCC
Q 022304 27 ICPVGGGCINLASRYGTDAG-SFFVKTNRSI--GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFG 103 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~~~g-~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~ 103 (299)
.+.++.|..+.+|+....++ .+++|..... ....+..|...++.+.. ..+++++..... ....+++|++++|.
T Consensus 11 ~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~~v~e~~~~~ 86 (261)
T cd05034 11 ERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTMSPEAFLQEAQIMKKLRH---DKLVQLYAVCSE-EEPIYIVTEYMSKG 86 (261)
T ss_pred eeeeccCcceEEEEEEEcCCceEEEEEecCCccCHHHHHHHHHHHhhCCC---CCEeeeeeeeec-CCceEEEEeccCCC
Confidence 45678888889999876544 7888877642 23456778888877753 245555554332 46789999999987
Q ss_pred CC
Q 022304 104 SS 105 (299)
Q Consensus 104 ~~ 105 (299)
++
T Consensus 87 ~L 88 (261)
T cd05034 87 SL 88 (261)
T ss_pred CH
Confidence 44
No 155
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=97.82 E-value=0.00015 Score=64.62 Aligned_cols=75 Identities=13% Similarity=0.059 Sum_probs=46.2
Q ss_pred eeeeCCccccceEEEEeCCc--cEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEe
Q 022304 27 ICPVGGGCINLASRYGTDAG--SFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 98 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~~~g--~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e 98 (299)
++.+|.|..+.||++..... .|.+|+.... ....+..|..++..+.. -.++.++..... .+..+++||
T Consensus 6 ~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~---~~i~~~~~~~~~-~~~~~lv~e 81 (332)
T cd05623 6 LKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDN---QWITTLHYAFQD-ENNLYLVMD 81 (332)
T ss_pred EEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCC---CCEeeEEEEEec-CCEEEEEEe
Confidence 56788888899999886533 6888886431 11224556655544422 223444433322 467899999
Q ss_pred cccCCCC
Q 022304 99 FIEFGSS 105 (299)
Q Consensus 99 ~l~G~~~ 105 (299)
|++|..+
T Consensus 82 y~~~g~L 88 (332)
T cd05623 82 YYVGGDL 88 (332)
T ss_pred ccCCCcH
Confidence 9998744
No 156
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=97.82 E-value=0.00016 Score=61.75 Aligned_cols=76 Identities=14% Similarity=0.097 Sum_probs=50.3
Q ss_pred eeeeeCCccccceEEEEeCCc-cEEEEecCCC--CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEecccC
Q 022304 26 KICPVGGGCINLASRYGTDAG-SFFVKTNRSI--GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEF 102 (299)
Q Consensus 26 ~~~~~~~G~~n~~y~v~~~~g-~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G 102 (299)
-.+.++.|..+.+|++....+ .+++|+.... ....+..|...++.+.. --+++++..... .+..+++||+++|
T Consensus 8 ~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~---~~i~~~~~~~~~-~~~~~lv~e~~~~ 83 (256)
T cd05059 8 FLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAMSEDDFIEEAKVMMKLSH---PNLVQLYGVCTK-QRPIFIVTEYMAN 83 (256)
T ss_pred hhhhhccCCCceEEEeEecCCccEEEEEeccCCCCHHHHHHHHHHHHhCCC---CCEEEEEEEEcC-CCceEEEEecCCC
Confidence 345677888889999876443 7899987642 22345678887777643 234455544332 4678999999998
Q ss_pred CCC
Q 022304 103 GSS 105 (299)
Q Consensus 103 ~~~ 105 (299)
..+
T Consensus 84 ~~L 86 (256)
T cd05059 84 GCL 86 (256)
T ss_pred CCH
Confidence 744
No 157
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=97.81 E-value=0.00023 Score=62.34 Aligned_cols=74 Identities=12% Similarity=0.075 Sum_probs=49.5
Q ss_pred eeeeeeCCccccceEEEEeC--CccEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEe
Q 022304 25 TKICPVGGGCINLASRYGTD--AGSFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 98 (299)
Q Consensus 25 ~~~~~~~~G~~n~~y~v~~~--~g~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e 98 (299)
.-++.++.|..+.||++... +..+++|..... ....+..|...++.|.. -.+.+++..... .+..++++|
T Consensus 9 ~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h---~nI~~~~~~~~~-~~~~~lv~e 84 (301)
T cd07873 9 IKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKH---ANIVTLHDIIHT-EKSLTLVFE 84 (301)
T ss_pred EEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCC---CCcceEEEEEec-CCeEEEEEe
Confidence 34577888888999998764 347888876521 12345678888877753 234555554433 567899999
Q ss_pred cccC
Q 022304 99 FIEF 102 (299)
Q Consensus 99 ~l~G 102 (299)
|++|
T Consensus 85 ~~~~ 88 (301)
T cd07873 85 YLDK 88 (301)
T ss_pred cccc
Confidence 9875
No 158
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=97.81 E-value=0.00013 Score=64.46 Aligned_cols=72 Identities=15% Similarity=0.067 Sum_probs=44.0
Q ss_pred eCCccccceEEEEeCC-c-cEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEeccc
Q 022304 30 VGGGCINLASRYGTDA-G-SFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE 101 (299)
Q Consensus 30 ~~~G~~n~~y~v~~~~-g-~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~ 101 (299)
+|.|..+.||++...+ + .|.+|+.... ....+..|..++..+.. + .+++++..... .+..+++||+++
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h--~-~iv~~~~~~~~-~~~~~lv~e~~~ 76 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNC--P-FIVPLKFSFQS-PEKLYLVLAFIN 76 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCC--C-cEeceeeEEec-CCeEEEEEcCCC
Confidence 4567778999988643 3 6888876421 11234567777766642 1 23333333222 468899999999
Q ss_pred CCCC
Q 022304 102 FGSS 105 (299)
Q Consensus 102 G~~~ 105 (299)
|..+
T Consensus 77 ~g~L 80 (312)
T cd05585 77 GGEL 80 (312)
T ss_pred CCcH
Confidence 8743
No 159
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=97.81 E-value=0.00014 Score=64.42 Aligned_cols=74 Identities=12% Similarity=0.024 Sum_probs=48.1
Q ss_pred eeCCccccceEEEEeCC--ccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEecc
Q 022304 29 PVGGGCINLASRYGTDA--GSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI 100 (299)
Q Consensus 29 ~~~~G~~n~~y~v~~~~--g~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l 100 (299)
.+|.|..+.||++.... ..|.+|+.... ....+..|..++..+..+ -.+++++..... .+..+++|||+
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h--~~i~~~~~~~~~-~~~~~lv~e~~ 78 (318)
T cd05570 2 VLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKH--PFLTQLHSCFQT-KDRLFFVMEYV 78 (318)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCC--CCccceeeEEEc-CCEEEEEEcCC
Confidence 46777788999988643 37888977531 123345677777666543 245556654332 46789999999
Q ss_pred cCCCC
Q 022304 101 EFGSS 105 (299)
Q Consensus 101 ~G~~~ 105 (299)
+|..+
T Consensus 79 ~~~~L 83 (318)
T cd05570 79 NGGDL 83 (318)
T ss_pred CCCCH
Confidence 98744
No 160
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=97.81 E-value=0.00031 Score=62.65 Aligned_cols=76 Identities=18% Similarity=0.037 Sum_probs=51.2
Q ss_pred eeeeeCCccccceEEEEeC-Cc-cEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEec
Q 022304 26 KICPVGGGCINLASRYGTD-AG-SFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 99 (299)
Q Consensus 26 ~~~~~~~G~~n~~y~v~~~-~g-~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~ 99 (299)
-++.++.|..+.||++... .+ .+++|+.... ....+..|+++++.+.. -.+++++..... .+..+++|||
T Consensus 9 ~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h---~~iv~~~~~~~~-~~~~~lv~e~ 84 (333)
T cd06650 9 KISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNS---PYIVGFYGAFYS-DGEISICMEH 84 (333)
T ss_pred eeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCC---CcccceeEEEEE-CCEEEEEEec
Confidence 3567888888999998875 33 5667765432 12346788888887753 235555554333 5789999999
Q ss_pred ccCCCC
Q 022304 100 IEFGSS 105 (299)
Q Consensus 100 l~G~~~ 105 (299)
++|..+
T Consensus 85 ~~~~~L 90 (333)
T cd06650 85 MDGGSL 90 (333)
T ss_pred CCCCcH
Confidence 998744
No 161
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=97.80 E-value=0.00024 Score=61.66 Aligned_cols=78 Identities=19% Similarity=0.191 Sum_probs=49.1
Q ss_pred eeeeeeCCccccceEEEEe-----C-CccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCccceeecccC-CCce
Q 022304 25 TKICPVGGGCINLASRYGT-----D-AGSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALP-TGGS 93 (299)
Q Consensus 25 ~~~~~~~~G~~n~~y~v~~-----~-~g~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~-~~~~ 93 (299)
.-+..++.|..+.+|++.. . +..+++|...... ...+..|+.+++.+... .+++.+...... ....
T Consensus 7 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~---~i~~~~~~~~~~~~~~~ 83 (284)
T cd05079 7 KRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHE---NIVKYKGICTEDGGNGI 83 (284)
T ss_pred hhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCC---CeeeeeeEEecCCCCce
Confidence 3456788888889998863 1 2368889876421 23466788877777431 233344332221 2467
Q ss_pred EEEEecccCCCC
Q 022304 94 YIIMEFIEFGSS 105 (299)
Q Consensus 94 ~~v~e~l~G~~~ 105 (299)
+++||+++|..+
T Consensus 84 ~lv~e~~~g~~L 95 (284)
T cd05079 84 KLIMEFLPSGSL 95 (284)
T ss_pred EEEEEccCCCCH
Confidence 899999999754
No 162
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=97.80 E-value=0.00018 Score=65.27 Aligned_cols=77 Identities=13% Similarity=0.085 Sum_probs=48.8
Q ss_pred eeeeeeCCccccceEEEEeCC--ccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEE
Q 022304 25 TKICPVGGGCINLASRYGTDA--GSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII 96 (299)
Q Consensus 25 ~~~~~~~~G~~n~~y~v~~~~--g~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v 96 (299)
.-++.+|.|..+.||++.... ..+.+|+.... ....+..|..+++.+.. -.+++++..... .+..+++
T Consensus 46 ~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~h---p~iv~~~~~~~~-~~~~~lv 121 (371)
T cd05622 46 EVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANS---PWVVQLFYAFQD-DRYLYMV 121 (371)
T ss_pred EEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCC---CCCCeEEEEEEc-CCEEEEE
Confidence 345778888889999998753 37888876421 11234566766665532 223445443322 4678999
Q ss_pred EecccCCCC
Q 022304 97 MEFIEFGSS 105 (299)
Q Consensus 97 ~e~l~G~~~ 105 (299)
||+++|..+
T Consensus 122 ~Ey~~gg~L 130 (371)
T cd05622 122 MEYMPGGDL 130 (371)
T ss_pred EcCCCCCcH
Confidence 999999744
No 163
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=97.79 E-value=0.00021 Score=62.26 Aligned_cols=75 Identities=13% Similarity=0.069 Sum_probs=49.1
Q ss_pred eeeeCCccccceEEEEeCC--ccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEe
Q 022304 27 ICPVGGGCINLASRYGTDA--GSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 98 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~~~--g~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e 98 (299)
.+.++.|..+.+|++...+ ..+++|..... ....+..|+..++.+. + -.+++++..... ....+++||
T Consensus 6 ~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h--~~i~~~~~~~~~-~~~~~~v~e 81 (290)
T cd05580 6 IKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIR-H--PFLVNLYGSFQD-DSNLYLVME 81 (290)
T ss_pred EEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCC-C--CCccceeeEEEc-CCeEEEEEe
Confidence 4677878888999987643 37888876531 1234566777777775 2 234555544332 467899999
Q ss_pred cccCCCC
Q 022304 99 FIEFGSS 105 (299)
Q Consensus 99 ~l~G~~~ 105 (299)
+++|..+
T Consensus 82 ~~~~~~L 88 (290)
T cd05580 82 YVPGGEL 88 (290)
T ss_pred cCCCCCH
Confidence 9988643
No 164
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=97.79 E-value=0.00026 Score=60.58 Aligned_cols=74 Identities=19% Similarity=0.060 Sum_probs=48.8
Q ss_pred eeeCCccccceEEEEeCCc-cEEEEecCCCC---------cchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEE
Q 022304 28 CPVGGGCINLASRYGTDAG-SFFVKTNRSIG---------PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM 97 (299)
Q Consensus 28 ~~~~~G~~n~~y~v~~~~g-~~vlK~~~~~~---------~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~ 97 (299)
..++.|..+.+|+....++ .+++|...... ...+..|.+.++.+.. ..+++.+..... .+..++++
T Consensus 6 ~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~---~~i~~~~~~~~~-~~~~~lv~ 81 (265)
T cd06631 6 EVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKH---VNIVQYLGTCLD-DNTISIFM 81 (265)
T ss_pred ceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCC---CCEeeEeeEeec-CCeEEEEE
Confidence 4577788889999877555 68888654211 1335677777777742 234555544332 46889999
Q ss_pred ecccCCCC
Q 022304 98 EFIEFGSS 105 (299)
Q Consensus 98 e~l~G~~~ 105 (299)
||++|.++
T Consensus 82 e~~~~~~L 89 (265)
T cd06631 82 EFVPGGSI 89 (265)
T ss_pred ecCCCCcH
Confidence 99999743
No 165
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=97.79 E-value=0.00017 Score=61.56 Aligned_cols=74 Identities=22% Similarity=0.213 Sum_probs=49.5
Q ss_pred eeeeCCccccceEEEEeCCc-cEEEEecCCC--CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEecccCC
Q 022304 27 ICPVGGGCINLASRYGTDAG-SFFVKTNRSI--GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFG 103 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~~~g-~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~ 103 (299)
+..++.|..+.+|++...++ .+++|..... ....+..|..+++.+... .+.+++.... ....+++|++++|.
T Consensus 11 ~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~E~~~l~~l~~~---~i~~~~~~~~--~~~~~lv~e~~~~~ 85 (260)
T cd05070 11 IKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTMSPESFLEEAQIMKKLRHD---KLVQLYAVVS--EEPIYIVTEYMSKG 85 (260)
T ss_pred hheeccccCceEEEEEecCCceeEEEEecCCCCCHHHHHHHHHHHHhcCCC---ceEEEEeEEC--CCCcEEEEEecCCC
Confidence 35678888889999986554 7888877642 234567888888887532 2233333221 35679999999886
Q ss_pred CC
Q 022304 104 SS 105 (299)
Q Consensus 104 ~~ 105 (299)
.+
T Consensus 86 ~L 87 (260)
T cd05070 86 SL 87 (260)
T ss_pred cH
Confidence 43
No 166
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=97.79 E-value=0.00041 Score=60.70 Aligned_cols=78 Identities=13% Similarity=0.072 Sum_probs=50.3
Q ss_pred eeeeeeeCCccccceEEEEeC--CccEEEEecCCC---CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEe
Q 022304 24 ITKICPVGGGCINLASRYGTD--AGSFFVKTNRSI---GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 98 (299)
Q Consensus 24 ~~~~~~~~~G~~n~~y~v~~~--~g~~vlK~~~~~---~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e 98 (299)
-.-++.++.|..+.+|++... +..+++|..... ....+..|...++.+.. ..+.+++..... .+..+++|+
T Consensus 21 y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h---~~i~~~~~~~~~-~~~~~lv~e 96 (297)
T cd06656 21 YTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKN---PNIVNYLDSYLV-GDELWVVME 96 (297)
T ss_pred ceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCC---CCEeeEEEEEec-CCEEEEeec
Confidence 344677888888899998752 348888877532 12345567776666532 234445543322 467899999
Q ss_pred cccCCCC
Q 022304 99 FIEFGSS 105 (299)
Q Consensus 99 ~l~G~~~ 105 (299)
|++|..+
T Consensus 97 ~~~~~~L 103 (297)
T cd06656 97 YLAGGSL 103 (297)
T ss_pred ccCCCCH
Confidence 9998743
No 167
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=97.79 E-value=0.00036 Score=59.38 Aligned_cols=74 Identities=22% Similarity=0.130 Sum_probs=49.1
Q ss_pred eeeeCCccccceEEEEeC--CccEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEecc
Q 022304 27 ICPVGGGCINLASRYGTD--AGSFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI 100 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~~--~g~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l 100 (299)
.+.++.|..+.+|++... +..|++|..... ....+..|...++.+.. -.+++++..... .+..+++++++
T Consensus 5 ~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~lv~e~~ 80 (255)
T cd08219 5 LRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKH---PNIVAFKESFEA-DGHLYIVMEYC 80 (255)
T ss_pred EEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCC---CCcceEEEEEEE-CCEEEEEEeeC
Confidence 467888888899998864 348899976421 12345667777776643 234555544333 56889999999
Q ss_pred cCCC
Q 022304 101 EFGS 104 (299)
Q Consensus 101 ~G~~ 104 (299)
+|..
T Consensus 81 ~~~~ 84 (255)
T cd08219 81 DGGD 84 (255)
T ss_pred CCCc
Confidence 9863
No 168
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=97.79 E-value=0.00034 Score=61.39 Aligned_cols=76 Identities=18% Similarity=0.052 Sum_probs=48.7
Q ss_pred eeeeeCCccccceEEEEeCC-----------------c-cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCccce
Q 022304 26 KICPVGGGCINLASRYGTDA-----------------G-SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPF 83 (299)
Q Consensus 26 ~~~~~~~G~~n~~y~v~~~~-----------------g-~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~ 83 (299)
-.+.+|.|....||++...+ + .+.+|+..... ...+..|+..+..+.. -.+.+++
T Consensus 9 ~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h---~niv~~~ 85 (304)
T cd05096 9 FKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKD---PNIIRLL 85 (304)
T ss_pred eeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCC---CCeeEEE
Confidence 34678888889999986421 1 47888776421 2345678877777642 2344455
Q ss_pred eecccCCCceEEEEecccCCCC
Q 022304 84 KVGALPTGGSYIIMEFIEFGSS 105 (299)
Q Consensus 84 ~~~~~~~~~~~~v~e~l~G~~~ 105 (299)
..... .+..+++|||++|..+
T Consensus 86 ~~~~~-~~~~~lv~e~~~~~~L 106 (304)
T cd05096 86 GVCVD-EDPLCMITEYMENGDL 106 (304)
T ss_pred EEEec-CCceEEEEecCCCCcH
Confidence 44332 4678999999988743
No 169
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=97.78 E-value=0.00056 Score=57.58 Aligned_cols=75 Identities=16% Similarity=0.101 Sum_probs=51.4
Q ss_pred eeeeCCccccceEEEEeC-Cc-cEEEEecCCC---CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEeccc
Q 022304 27 ICPVGGGCINLASRYGTD-AG-SFFVKTNRSI---GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE 101 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~~-~g-~~vlK~~~~~---~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~ 101 (299)
...++.|..+.+|++... ++ .+++|..... ....+..|.+.++.+.. -.+++++..... ....++++++++
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~---~~i~~~~~~~~~-~~~~~l~~e~~~ 80 (253)
T cd05122 5 LEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKH---PNIVKYYGSYLK-KDELWIVMEFCS 80 (253)
T ss_pred eeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCC---CCEeEEEEEEec-CCeEEEEEecCC
Confidence 356777878899999875 33 7888988653 22456778877777652 345556654333 467899999999
Q ss_pred CCCC
Q 022304 102 FGSS 105 (299)
Q Consensus 102 G~~~ 105 (299)
|.++
T Consensus 81 ~~~L 84 (253)
T cd05122 81 GGSL 84 (253)
T ss_pred CCcH
Confidence 8644
No 170
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=97.78 E-value=0.00033 Score=59.41 Aligned_cols=73 Identities=19% Similarity=0.164 Sum_probs=50.4
Q ss_pred eeCCccccceEEEEeC-----CccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEec
Q 022304 29 PVGGGCINLASRYGTD-----AGSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 99 (299)
Q Consensus 29 ~~~~G~~n~~y~v~~~-----~g~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~ 99 (299)
.++.|....+|++... ...+.+|+..... ...+..|++.++.+. + ..+++++..... .+..+++|++
T Consensus 2 ~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~-~--~~i~~~~~~~~~-~~~~~lv~e~ 77 (262)
T cd00192 2 KLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLG-H--PNVVRLLGVCTE-EEPLYLVLEY 77 (262)
T ss_pred ccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcC-C--CChheeeeeecC-CCceEEEEEe
Confidence 4677777889998875 3378999887532 245667888887775 2 244555554433 5688999999
Q ss_pred ccCCCC
Q 022304 100 IEFGSS 105 (299)
Q Consensus 100 l~G~~~ 105 (299)
.+|.++
T Consensus 78 ~~~~~L 83 (262)
T cd00192 78 MEGGDL 83 (262)
T ss_pred ccCCcH
Confidence 988754
No 171
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=97.78 E-value=0.00039 Score=62.92 Aligned_cols=138 Identities=18% Similarity=0.126 Sum_probs=84.9
Q ss_pred eeeeCCccccceEEEEeC--CccEEEEecCCC--------CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEE
Q 022304 27 ICPVGGGCINLASRYGTD--AGSFFVKTNRSI--------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII 96 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~~--~g~~vlK~~~~~--------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v 96 (299)
...+|.|..+.|+..... +..+.+|+.... ....+.+|...++.+..+ + -+-+++..-.+ ....+++
T Consensus 22 ~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~H-p-nI~~l~ev~~t-~~~~~iv 98 (370)
T KOG0583|consen 22 GRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSH-P-NIIRLLEVFAT-PTKIYIV 98 (370)
T ss_pred eeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccC-C-CEeEEEEEEec-CCeEEEE
Confidence 467888888888887652 347888875431 134567899888888755 2 33444444333 4569999
Q ss_pred EecccCCCCCCcHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCCCCHHHHHHHhhhHHHHHHHHhhcCChHHH
Q 022304 97 MEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIY 176 (299)
Q Consensus 97 ~e~l~G~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (299)
|||+.|+ +.+-.+..... .. + . . ..
T Consensus 99 mEy~~gG----------dL~~~i~~~g~---------------l~------E------------~---~---------ar 123 (370)
T KOG0583|consen 99 MEYCSGG----------DLFDYIVNKGR---------------LK------E------------D---E---------AR 123 (370)
T ss_pred EEecCCc----------cHHHHHHHcCC---------------CC------h------------H---H---------HH
Confidence 9999884 22333333110 00 0 0 0 01
Q ss_pred HHHHHHHHHHhccccCCCCCcceeccCCCCCCeeecCC-CCeEEEccc-cccC
Q 022304 177 QRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKN-GEPVILDPA-CYYG 227 (299)
Q Consensus 177 ~~~~~~~~~l~~~l~~~~~~~~liHgDl~~~Nvl~~~~-~~~~iID~~-~~~g 227 (299)
..+.+++..+.... ..+++|+||++.|+|++.+ +...|+||. +...
T Consensus 124 ~~F~Qlisav~y~H-----~~gi~HRDLK~ENilld~~~~~~Kl~DFG~s~~~ 171 (370)
T KOG0583|consen 124 KYFRQLISAVAYCH-----SRGIVHRDLKPENILLDGNEGNLKLSDFGLSAIS 171 (370)
T ss_pred HHHHHHHHHHHHHH-----hCCEeeCCCCHHHEEecCCCCCEEEecccccccc
Confidence 23344444444322 4689999999999999988 778999985 4433
No 172
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=97.77 E-value=0.00021 Score=63.52 Aligned_cols=27 Identities=30% Similarity=0.272 Sum_probs=24.1
Q ss_pred cceeccCCCCCCeeecCCCCeEEEccc
Q 022304 197 PCLLHGDLWSGNISSDKNGEPVILDPA 223 (299)
Q Consensus 197 ~~liHgDl~~~Nvl~~~~~~~~iID~~ 223 (299)
.+++|+|++|.|||++.++...|+|+.
T Consensus 115 ~giiHrDlkp~Nili~~~~~~kl~DfG 141 (325)
T cd05602 115 LNIVYRDLKPENILLDSQGHIVLTDFG 141 (325)
T ss_pred CCeEecCCCHHHeEECCCCCEEEccCC
Confidence 479999999999999988878899974
No 173
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=97.77 E-value=0.00055 Score=59.51 Aligned_cols=79 Identities=16% Similarity=0.048 Sum_probs=51.3
Q ss_pred eeeeeeeCCccccceEEEEeCC--ccEEEEecCCC-C---cchHHHHHHHHHHHHhcCCCCCccceeeccc-CCCceEEE
Q 022304 24 ITKICPVGGGCINLASRYGTDA--GSFFVKTNRSI-G---PSMFEGEALGLGAMYETRTIRAPRPFKVGAL-PTGGSYII 96 (299)
Q Consensus 24 ~~~~~~~~~G~~n~~y~v~~~~--g~~vlK~~~~~-~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~-~~~~~~~v 96 (299)
...+++++.|....+|++...+ ..+++|..... . ...+..|.+.++.+... .+.+++..... ..+..+++
T Consensus 3 ~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~---~iv~~~~~~~~~~~~~~~lv 79 (287)
T cd06621 3 IVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSP---YIVKYYGAFLDESSSSIGIA 79 (287)
T ss_pred eEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCC---CeeeeeeEEEccCCCeEEEE
Confidence 4567888989888999998743 37888987642 1 23466788777777431 23334432211 13568999
Q ss_pred EecccCCCC
Q 022304 97 MEFIEFGSS 105 (299)
Q Consensus 97 ~e~l~G~~~ 105 (299)
|||++|..+
T Consensus 80 ~e~~~~~~L 88 (287)
T cd06621 80 MEYCEGGSL 88 (287)
T ss_pred EEecCCCCH
Confidence 999998744
No 174
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=97.77 E-value=0.00025 Score=62.27 Aligned_cols=75 Identities=15% Similarity=-0.006 Sum_probs=48.5
Q ss_pred eeeeCCccccceEEEEeCC--ccEEEEecCCCC------cchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEe
Q 022304 27 ICPVGGGCINLASRYGTDA--GSFFVKTNRSIG------PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 98 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~~~--g~~vlK~~~~~~------~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e 98 (299)
++.++.|..+.+|+..... ..+++|...... ...+..|...++.+.. .-+++++..... .+..+++||
T Consensus 6 ~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~---~~i~~~~~~~~~-~~~~~lv~e 81 (305)
T cd05609 6 IKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAEN---PFVVSMFCSFET-KRHLCMVME 81 (305)
T ss_pred eeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCC---CCeeeeEEEEec-CCEEEEEEe
Confidence 4677888888899887643 378888765321 2335567776766542 234555544332 457799999
Q ss_pred cccCCCC
Q 022304 99 FIEFGSS 105 (299)
Q Consensus 99 ~l~G~~~ 105 (299)
+++|..+
T Consensus 82 ~~~g~~L 88 (305)
T cd05609 82 YVEGGDC 88 (305)
T ss_pred cCCCCcH
Confidence 9998643
No 175
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=97.77 E-value=0.00032 Score=62.26 Aligned_cols=73 Identities=12% Similarity=-0.013 Sum_probs=45.3
Q ss_pred eeCCccccceEEEEeC-Cc-cEEEEecCCC---C---cchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEecc
Q 022304 29 PVGGGCINLASRYGTD-AG-SFFVKTNRSI---G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI 100 (299)
Q Consensus 29 ~~~~G~~n~~y~v~~~-~g-~~vlK~~~~~---~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l 100 (299)
.+|.|..+.||++... +| .|.+|+.... . ...+..|..+++.+.. -.+.+++..... .+..+++|||+
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h---p~i~~~~~~~~~-~~~~~lv~e~~ 77 (323)
T cd05571 2 LLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRH---PFLTALKYSFQT-HDRLCFVMEYA 77 (323)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCC---CCCCCEEEEEEc-CCEEEEEEeCC
Confidence 4677888899998764 33 7888977531 1 1234456666666642 123444433222 46789999999
Q ss_pred cCCCC
Q 022304 101 EFGSS 105 (299)
Q Consensus 101 ~G~~~ 105 (299)
+|..+
T Consensus 78 ~~~~L 82 (323)
T cd05571 78 NGGEL 82 (323)
T ss_pred CCCcH
Confidence 98643
No 176
>PHA03212 serine/threonine kinase US3; Provisional
Probab=97.77 E-value=0.00028 Score=64.51 Aligned_cols=70 Identities=11% Similarity=-0.049 Sum_probs=47.4
Q ss_pred eeeeeCCccccceEEEEeCC--ccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEecccC
Q 022304 26 KICPVGGGCINLASRYGTDA--GSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEF 102 (299)
Q Consensus 26 ~~~~~~~G~~n~~y~v~~~~--g~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G 102 (299)
-++.++.|..+.||++.... ..+++|.... ..+..|+.+++.|.. -.+.+++..... ....+++++++.|
T Consensus 96 ~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~---~~~~~E~~il~~l~H---pnIv~~~~~~~~-~~~~~lv~e~~~~ 167 (391)
T PHA03212 96 ILETFTPGAEGFAFACIDNKTCEHVVIKAGQR---GGTATEAHILRAINH---PSIIQLKGTFTY-NKFTCLILPRYKT 167 (391)
T ss_pred EEEEEcCCCCeEEEEEEECCCCCEEEEechhh---hhhHHHHHHHHhCCC---CCCCCEeEEEEE-CCeeEEEEecCCC
Confidence 35778888889999987643 3778886542 346789999988853 234445543322 4677899998754
No 177
>PHA03209 serine/threonine kinase US3; Provisional
Probab=97.76 E-value=0.00027 Score=63.74 Aligned_cols=70 Identities=10% Similarity=-0.092 Sum_probs=47.8
Q ss_pred eeeeeCCccccceEEEEeCCc--cEEEEecCCCCcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEecccC
Q 022304 26 KICPVGGGCINLASRYGTDAG--SFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEF 102 (299)
Q Consensus 26 ~~~~~~~G~~n~~y~v~~~~g--~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G 102 (299)
-+..++.|..+.||++..... .+++|+.... ....|+.+++.+.. -.+++++..... .+..++++++..|
T Consensus 70 ~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~---~~~~E~~~l~~l~h---~~iv~~~~~~~~-~~~~~lv~e~~~~ 141 (357)
T PHA03209 70 VIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG---TTLIEAMLLQNVNH---PSVIRMKDTLVS-GAITCMVLPHYSS 141 (357)
T ss_pred EEEEecCCCCeEEEEEEECCCCceEEEEeCCcc---ccHHHHHHHHhCCC---CCCcChhheEEe-CCeeEEEEEccCC
Confidence 456788888899999887433 7888986432 23568888887753 235555544332 4578899999865
No 178
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=97.76 E-value=0.00035 Score=60.67 Aligned_cols=76 Identities=16% Similarity=0.106 Sum_probs=46.0
Q ss_pred eeeeCCccccceEEEEeC--Cc-cEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCCccceeecc---c-CCCceE
Q 022304 27 ICPVGGGCINLASRYGTD--AG-SFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGA---L-PTGGSY 94 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~~--~g-~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~---~-~~~~~~ 94 (299)
++.++.|..+.||++... ++ .+++|..... .......|...++.|.....-.+++++.... . ..+..+
T Consensus 6 ~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~~~~~ 85 (290)
T cd07862 6 VAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLT 85 (290)
T ss_pred eeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCCCcEE
Confidence 457888888999999752 34 5677866421 1223456888787775321123445554321 1 135689
Q ss_pred EEEecccC
Q 022304 95 IIMEFIEF 102 (299)
Q Consensus 95 ~v~e~l~G 102 (299)
++||+++|
T Consensus 86 lv~e~~~~ 93 (290)
T cd07862 86 LVFEHVDQ 93 (290)
T ss_pred EEEccCCC
Confidence 99999975
No 179
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=97.76 E-value=0.00044 Score=59.20 Aligned_cols=77 Identities=22% Similarity=0.142 Sum_probs=49.8
Q ss_pred eeeeeeCCccccceEEEEeC--CccEEEEecCCCC--cchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEecc
Q 022304 25 TKICPVGGGCINLASRYGTD--AGSFFVKTNRSIG--PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI 100 (299)
Q Consensus 25 ~~~~~~~~G~~n~~y~v~~~--~g~~vlK~~~~~~--~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l 100 (299)
.-...++.|..+.+|++... +..+++|...... ...+..|.++++.+.. ..+.+++..... .+..+++|||+
T Consensus 9 ~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~lv~e~~ 84 (263)
T cd05052 9 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH---PNLVQLLGVCTR-EPPFYIITEFM 84 (263)
T ss_pred EEeeecCCcccceEEEEEEecCCceEEEEEecCCchHHHHHHHHHHHHHhCCC---CChhheEEEEcC-CCCcEEEEEeC
Confidence 33466788888889997754 3378889876432 2345678887877743 223444443322 46789999999
Q ss_pred cCCCC
Q 022304 101 EFGSS 105 (299)
Q Consensus 101 ~G~~~ 105 (299)
+|..+
T Consensus 85 ~~~~L 89 (263)
T cd05052 85 TYGNL 89 (263)
T ss_pred CCCcH
Confidence 98744
No 180
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=97.76 E-value=0.00032 Score=60.98 Aligned_cols=76 Identities=12% Similarity=0.034 Sum_probs=48.8
Q ss_pred eeeeCCccccceEEEEeC----Cc-cEEEEecCCC-------CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceE
Q 022304 27 ICPVGGGCINLASRYGTD----AG-SFFVKTNRSI-------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSY 94 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~~----~g-~~vlK~~~~~-------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~ 94 (299)
.+.++.|..+.+|++... +| .|.+|..... ....+..|+.+++.+..+ -.++.++..... .+..+
T Consensus 5 ~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~--~~i~~~~~~~~~-~~~~~ 81 (290)
T cd05613 5 LKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQS--PFLVTLHYAFQT-DTKLH 81 (290)
T ss_pred eeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccC--CChhceeeEeec-CCeEE
Confidence 356788888899998752 33 6888877531 123456788888877654 234444433222 45778
Q ss_pred EEEecccCCCC
Q 022304 95 IIMEFIEFGSS 105 (299)
Q Consensus 95 ~v~e~l~G~~~ 105 (299)
+++|+++|..+
T Consensus 82 lv~e~~~~~~L 92 (290)
T cd05613 82 LILDYINGGEL 92 (290)
T ss_pred EEEecCCCCcH
Confidence 99999998643
No 181
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=97.75 E-value=0.00029 Score=61.12 Aligned_cols=73 Identities=14% Similarity=0.116 Sum_probs=47.2
Q ss_pred eeeeCCccccceEEEEeCC-c-cEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEec
Q 022304 27 ICPVGGGCINLASRYGTDA-G-SFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 99 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~~~-g-~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~ 99 (299)
+..++.|..+.+|++.... + .+.+|..... ....+..|..+++.+... .+.+++..... .+..+++|||
T Consensus 6 ~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~---~iv~~~~~~~~-~~~~~lv~e~ 81 (287)
T cd07848 6 LGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQE---NIVELKEAFRR-RGKLYLVFEY 81 (287)
T ss_pred EEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCc---cccchhhhEec-CCEEEEEEec
Confidence 4567888888999998743 3 6888876531 123456788888777532 22333332222 4688999999
Q ss_pred ccCC
Q 022304 100 IEFG 103 (299)
Q Consensus 100 l~G~ 103 (299)
++|.
T Consensus 82 ~~~~ 85 (287)
T cd07848 82 VEKN 85 (287)
T ss_pred CCCC
Confidence 9875
No 182
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=97.75 E-value=0.00018 Score=63.25 Aligned_cols=74 Identities=16% Similarity=0.166 Sum_probs=48.3
Q ss_pred eeeCCccccceEEEEeC-Cc-c--EEEEecCCC----CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEec
Q 022304 28 CPVGGGCINLASRYGTD-AG-S--FFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 99 (299)
Q Consensus 28 ~~~~~G~~n~~y~v~~~-~g-~--~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~ 99 (299)
+.+|.|..+.+|++... ++ . +.+|..... ....+..|...+..+..+ -.+++++..... .+..+++|||
T Consensus 13 ~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h--~~iv~~~~~~~~-~~~~~lv~e~ 89 (303)
T cd05088 13 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHH--PNIINLLGACEH-RGYLYLAIEY 89 (303)
T ss_pred eeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCC--CCcceEEEEECC-CCCceEEEEe
Confidence 56788888899999753 23 3 344544321 123456788888888544 245666655443 5689999999
Q ss_pred ccCCC
Q 022304 100 IEFGS 104 (299)
Q Consensus 100 l~G~~ 104 (299)
++|.+
T Consensus 90 ~~~~~ 94 (303)
T cd05088 90 APHGN 94 (303)
T ss_pred CCCCc
Confidence 99864
No 183
>PHA03211 serine/threonine kinase US3; Provisional
Probab=97.75 E-value=0.00038 Score=65.04 Aligned_cols=69 Identities=12% Similarity=-0.022 Sum_probs=48.0
Q ss_pred eeeeCCccccceEEEEeCC--ccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEecccC
Q 022304 27 ICPVGGGCINLASRYGTDA--GSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEF 102 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~~~--g~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G 102 (299)
...++.|..+.||+....+ ..+++|.... .....|+++++.|.. -.+.+++..... .+..+++|++..|
T Consensus 174 ~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~---~~~~~E~~iL~~L~H---pnIv~l~~~~~~-~~~~~lv~e~~~~ 244 (461)
T PHA03211 174 HRALTPGSEGCVFESSHPDYPQRVVVKAGWY---ASSVHEARLLRRLSH---PAVLALLDVRVV-GGLTCLVLPKYRS 244 (461)
T ss_pred EEEEccCCCeEEEEEEECCCCCEEEEecccc---cCHHHHHHHHHHCCC---CCCCcEEEEEEE-CCEEEEEEEccCC
Confidence 4567888889999988754 2688886432 235689999988853 245556654433 5678999998865
No 184
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=97.74 E-value=0.0003 Score=62.33 Aligned_cols=27 Identities=30% Similarity=0.294 Sum_probs=24.3
Q ss_pred cceeccCCCCCCeeecCCCCeEEEccc
Q 022304 197 PCLLHGDLWSGNISSDKNGEPVILDPA 223 (299)
Q Consensus 197 ~~liHgDl~~~Nvl~~~~~~~~iID~~ 223 (299)
..++|+|++|.||+++.++.+.|+|+.
T Consensus 115 ~~ivH~Dlkp~NIll~~~~~~kl~Dfg 141 (321)
T cd05603 115 LNIIYRDLKPENILLDSQGHVVLTDFG 141 (321)
T ss_pred CCeEeccCCHHHeEECCCCCEEEccCC
Confidence 479999999999999988888999975
No 185
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=97.73 E-value=0.0002 Score=62.69 Aligned_cols=133 Identities=16% Similarity=0.252 Sum_probs=84.5
Q ss_pred eeeeCCccccceEEEEeCC-c-cEEEEecCC------CCcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEe
Q 022304 27 ICPVGGGCINLASRYGTDA-G-SFFVKTNRS------IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 98 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~~~-g-~~vlK~~~~------~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e 98 (299)
+.-+|-|....||.|.-.+ + -|-+|.-.. .......+|..+|..+.. ++-|.-.+.+.. .+.-|+|++
T Consensus 30 lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~h--PFiv~l~ysFQt--~~kLylVld 105 (357)
T KOG0598|consen 30 LKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKH--PFIVKLIYSFQT--EEKLYLVLD 105 (357)
T ss_pred eeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCC--CcEeeeEEeccc--CCeEEEEEe
Confidence 4567888889999998753 3 466665432 123456788888888643 677776666654 478999999
Q ss_pred cccCCCCCCcHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCCCCHHHHHHHhhhHHHHHHHHhhcCChHHHHH
Q 022304 99 FIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQR 178 (299)
Q Consensus 99 ~l~G~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (299)
|+.|+.+ . +|-... | .+.++-..||..
T Consensus 106 ~~~GGeL----------f--~hL~~e-------------g------~F~E~~arfYla---------------------- 132 (357)
T KOG0598|consen 106 YLNGGEL----------F--YHLQRE-------------G------RFSEDRARFYLA---------------------- 132 (357)
T ss_pred ccCCccH----------H--HHHHhc-------------C------CcchhHHHHHHH----------------------
Confidence 9999754 1 222211 0 011222223321
Q ss_pred HHHHHHHHhccccCCCCCcceeccCCCCCCeeecCCCCeEEEccc
Q 022304 179 GHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA 223 (299)
Q Consensus 179 ~~~~~~~l~~~l~~~~~~~~liHgDl~~~Nvl~~~~~~~~iID~~ 223 (299)
+++-.+..+. ...+||+|++|+|||+|.+|...+-|+.
T Consensus 133 --Ei~lAL~~LH-----~~gIiyRDlKPENILLd~~GHi~LtDFg 170 (357)
T KOG0598|consen 133 --EIVLALGYLH-----SKGIIYRDLKPENILLDEQGHIKLTDFG 170 (357)
T ss_pred --HHHHHHHHHH-----hCCeeeccCCHHHeeecCCCcEEEeccc
Confidence 1122222222 4689999999999999999988999975
No 186
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=97.72 E-value=0.00035 Score=62.04 Aligned_cols=27 Identities=30% Similarity=0.278 Sum_probs=24.3
Q ss_pred cceeccCCCCCCeeecCCCCeEEEccc
Q 022304 197 PCLLHGDLWSGNISSDKNGEPVILDPA 223 (299)
Q Consensus 197 ~~liHgDl~~~Nvl~~~~~~~~iID~~ 223 (299)
..++|+|++|.|||++.++...|+|+.
T Consensus 115 ~givH~Dlkp~NIll~~~~~~kL~DfG 141 (325)
T cd05604 115 INIVYRDLKPENILLDSQGHVVLTDFG 141 (325)
T ss_pred CCeeecCCCHHHeEECCCCCEEEeecC
Confidence 479999999999999988888899975
No 187
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=97.72 E-value=0.00016 Score=62.77 Aligned_cols=72 Identities=13% Similarity=-0.031 Sum_probs=44.3
Q ss_pred eCCccccceEEEEeC-Cc-cEEEEecCCC---C---cchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEeccc
Q 022304 30 VGGGCINLASRYGTD-AG-SFFVKTNRSI---G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE 101 (299)
Q Consensus 30 ~~~G~~n~~y~v~~~-~g-~~vlK~~~~~---~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~ 101 (299)
++.|..+.||++... .+ .|.+|..... . ...+..|..+++.+... .+.++...... .+..+++||+++
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~---~i~~~~~~~~~-~~~~~lv~e~~~ 76 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSR---FIVSLAYAFQT-KTDLCLVMTIMN 76 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCC---cEeeeeEEEcC-CCeEEEEEeCCC
Confidence 456777899998763 33 7888876531 1 12345677777777431 23333332222 467899999999
Q ss_pred CCCC
Q 022304 102 FGSS 105 (299)
Q Consensus 102 G~~~ 105 (299)
|..+
T Consensus 77 ~g~L 80 (280)
T cd05608 77 GGDL 80 (280)
T ss_pred CCCH
Confidence 9754
No 188
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=97.71 E-value=0.00049 Score=58.74 Aligned_cols=75 Identities=17% Similarity=0.002 Sum_probs=48.1
Q ss_pred eeeeCCccccceEEEEeC--CccEEEEecCCCC--------cchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEE
Q 022304 27 ICPVGGGCINLASRYGTD--AGSFFVKTNRSIG--------PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII 96 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~~--~g~~vlK~~~~~~--------~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v 96 (299)
.+.++.|..+.+|++... +..+.+|..+... ...+..|...++.+.. -.+.+++..... ....+++
T Consensus 7 ~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~---~~i~~~~~~~~~-~~~~~~v 82 (263)
T cd06625 7 GKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQH---ERIVQYYGCLRD-DETLSIF 82 (263)
T ss_pred cceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCC---CCeeeeEEEEcc-CCeEEEE
Confidence 356788888889998753 2378888765311 1235667777777643 123445544333 4688999
Q ss_pred EecccCCCC
Q 022304 97 MEFIEFGSS 105 (299)
Q Consensus 97 ~e~l~G~~~ 105 (299)
+|+++|..+
T Consensus 83 ~e~~~~~~l 91 (263)
T cd06625 83 MEYMPGGSV 91 (263)
T ss_pred EEECCCCcH
Confidence 999988743
No 189
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=97.71 E-value=0.0006 Score=60.02 Aligned_cols=76 Identities=17% Similarity=0.011 Sum_probs=50.1
Q ss_pred eeeeeCCccccceEEEEeCC-c-cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEec
Q 022304 26 KICPVGGGCINLASRYGTDA-G-SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 99 (299)
Q Consensus 26 ~~~~~~~G~~n~~y~v~~~~-g-~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~ 99 (299)
-.+.++.|..+.||++.... + .+++|...... ...+..|+++++.+.. -.+.+++..... .+..++++||
T Consensus 5 ~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h---~~iv~~~~~~~~-~~~~~lv~ey 80 (308)
T cd06615 5 KLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNS---PYIVGFYGAFYS-DGEISICMEH 80 (308)
T ss_pred EEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCC---CCCCeEEEEEee-CCEEEEEeec
Confidence 45678888888999987643 3 67777765321 2335678888877743 234455544332 5788999999
Q ss_pred ccCCCC
Q 022304 100 IEFGSS 105 (299)
Q Consensus 100 l~G~~~ 105 (299)
++|..+
T Consensus 81 ~~~~~L 86 (308)
T cd06615 81 MDGGSL 86 (308)
T ss_pred cCCCcH
Confidence 998744
No 190
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=97.71 E-value=0.00049 Score=58.73 Aligned_cols=76 Identities=14% Similarity=0.112 Sum_probs=50.1
Q ss_pred eeeeeCCccccceEEEEeCCc-cEEEEecCCCC--cchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEecccC
Q 022304 26 KICPVGGGCINLASRYGTDAG-SFFVKTNRSIG--PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEF 102 (299)
Q Consensus 26 ~~~~~~~G~~n~~y~v~~~~g-~~vlK~~~~~~--~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G 102 (299)
-.+.++.|..+.+|.....++ .+.+|...... ...+..|...++.+.. -.+++++..... ....+++||++.|
T Consensus 8 ~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~lv~e~~~~ 83 (256)
T cd05113 8 FLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMKLSH---EKLVQLYGVCTK-QRPIYIVTEYMSN 83 (256)
T ss_pred EeeEecCcccceEEEEEecCCCcEEEEEcCCCcccHHHHHHHHHHHhcCCC---CCeeeEEEEEcc-CCCcEEEEEcCCC
Confidence 346788888889999876544 68889765422 2345677777776642 234555554432 4567999999988
Q ss_pred CCC
Q 022304 103 GSS 105 (299)
Q Consensus 103 ~~~ 105 (299)
..+
T Consensus 84 ~~l 86 (256)
T cd05113 84 GCL 86 (256)
T ss_pred CcH
Confidence 643
No 191
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=97.71 E-value=0.00024 Score=60.80 Aligned_cols=75 Identities=12% Similarity=-0.030 Sum_probs=47.8
Q ss_pred eeeeCCccccceEEEEeC--CccEEEEecCC-C--C---cchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEe
Q 022304 27 ICPVGGGCINLASRYGTD--AGSFFVKTNRS-I--G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 98 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~~--~g~~vlK~~~~-~--~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e 98 (299)
.+.++.|..+.+|++... +..+++|.... . . ...+..|..+++.+.. -.+++++..... .+..+++++
T Consensus 7 ~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~~v~e 82 (267)
T cd08228 7 EKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNH---PNVIKYLDSFIE-DNELNIVLE 82 (267)
T ss_pred eeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCC---cceeeeeeeEEE-CCeEEEEEE
Confidence 356788888899998863 34788886542 1 1 1235568877777743 234445543322 467899999
Q ss_pred cccCCCC
Q 022304 99 FIEFGSS 105 (299)
Q Consensus 99 ~l~G~~~ 105 (299)
+++|..+
T Consensus 83 ~~~~~~L 89 (267)
T cd08228 83 LADAGDL 89 (267)
T ss_pred ecCCCcH
Confidence 9998643
No 192
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=97.70 E-value=0.00044 Score=60.11 Aligned_cols=76 Identities=12% Similarity=0.054 Sum_probs=48.4
Q ss_pred eeeeeCCccccceEEEEeC-Cc-cEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEE
Q 022304 26 KICPVGGGCINLASRYGTD-AG-SFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM 97 (299)
Q Consensus 26 ~~~~~~~G~~n~~y~v~~~-~g-~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~ 97 (299)
.++.+|.|..+.||++... ++ .|.+|..... ....+..|..+++.+... .+..++..... .+..+++|
T Consensus 4 ~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~---~iv~~~~~~~~-~~~~~lv~ 79 (285)
T cd05631 4 HYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSR---FVVSLAYAYET-KDALCLVL 79 (285)
T ss_pred EEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCC---cEEEEEEEEcc-CCeEEEEE
Confidence 4567888888999998763 33 7888876431 112345678777777532 22333332222 46789999
Q ss_pred ecccCCCC
Q 022304 98 EFIEFGSS 105 (299)
Q Consensus 98 e~l~G~~~ 105 (299)
++++|..+
T Consensus 80 e~~~~g~L 87 (285)
T cd05631 80 TIMNGGDL 87 (285)
T ss_pred EecCCCcH
Confidence 99998744
No 193
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=97.70 E-value=7.9e-05 Score=68.57 Aligned_cols=71 Identities=13% Similarity=0.097 Sum_probs=51.8
Q ss_pred eeeeCCccccceEEEEeCCc-cEEEE-ecC----CCCcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEecc
Q 022304 27 ICPVGGGCINLASRYGTDAG-SFFVK-TNR----SIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI 100 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~~~g-~~vlK-~~~----~~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l 100 (299)
+..+|.|.++.||+|...+. -|++| +.- .....-+..|+..|..|..+ ..+-++|.+.-+ +|..|||||+=
T Consensus 366 lk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~--~~IIqL~DYEv~-d~~lYmvmE~G 442 (677)
T KOG0596|consen 366 LKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGH--DKIIQLYDYEVT-DGYLYMVMECG 442 (677)
T ss_pred HHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCC--ceEEEEeeeecc-CceEEEEeecc
Confidence 56788899999999987654 45444 322 12234578899999999875 677888877655 78999999963
No 194
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=97.70 E-value=0.00046 Score=58.97 Aligned_cols=78 Identities=21% Similarity=0.148 Sum_probs=50.8
Q ss_pred ceeeeeeeCCccccceEEEEeCCc-cEEEEecCCCC--cchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEec
Q 022304 23 HITKICPVGGGCINLASRYGTDAG-SFFVKTNRSIG--PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 99 (299)
Q Consensus 23 ~~~~~~~~~~G~~n~~y~v~~~~g-~~vlK~~~~~~--~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~ 99 (299)
.+.=.+.++.|..+.+|++...++ .+++|...... ...+..|..+++.+... .+.+++.... ....+++|++
T Consensus 7 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~---~i~~~~~~~~--~~~~~~v~e~ 81 (260)
T cd05073 7 SLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHD---KLVKLHAVVT--KEPIYIITEF 81 (260)
T ss_pred ceeEEeEecCccceEEEEEEecCCccEEEEecCCChhHHHHHHHHHHHHHhcCCC---CcceEEEEEc--CCCeEEEEEe
Confidence 334456788888899999986544 78888776432 24566788888777532 2222333222 3567999999
Q ss_pred ccCCCC
Q 022304 100 IEFGSS 105 (299)
Q Consensus 100 l~G~~~ 105 (299)
++|..+
T Consensus 82 ~~~~~L 87 (260)
T cd05073 82 MAKGSL 87 (260)
T ss_pred CCCCcH
Confidence 988643
No 195
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=97.70 E-value=0.00019 Score=61.75 Aligned_cols=75 Identities=11% Similarity=0.038 Sum_probs=49.1
Q ss_pred eeeCCccccceEEEEeC--CccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEec
Q 022304 28 CPVGGGCINLASRYGTD--AGSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 99 (299)
Q Consensus 28 ~~~~~G~~n~~y~v~~~--~g~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~ 99 (299)
+.++.|..+.+|++... +..+++|+.... ....+..|...++.+..+ -.+++++..... .+..+++|++
T Consensus 7 ~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~--~~i~~~~~~~~~-~~~~~lv~e~ 83 (280)
T cd05581 7 KIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGH--PGIIKLYYTFQD-EENLYFVLEY 83 (280)
T ss_pred eeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccC--CCchhHHHHhcC-CceEEEEEcC
Confidence 56788888899998874 337888987531 123456677777777522 234555544322 4688999999
Q ss_pred ccCCCC
Q 022304 100 IEFGSS 105 (299)
Q Consensus 100 l~G~~~ 105 (299)
++|.++
T Consensus 84 ~~~~~L 89 (280)
T cd05581 84 APNGEL 89 (280)
T ss_pred CCCCcH
Confidence 988744
No 196
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=97.70 E-value=0.00069 Score=58.04 Aligned_cols=77 Identities=13% Similarity=0.037 Sum_probs=51.1
Q ss_pred eeeeCCccccceEEEEeCC--ccEEEEecCCCC--cchHHHHHHHHHHHHhcCCCCCccceeecccC-----CCceEEEE
Q 022304 27 ICPVGGGCINLASRYGTDA--GSFFVKTNRSIG--PSMFEGEALGLGAMYETRTIRAPRPFKVGALP-----TGGSYIIM 97 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~~~--g~~vlK~~~~~~--~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~-----~~~~~~v~ 97 (299)
.+.++.|..+.+|++.... ..+++|+..... ...+..|..+++.+..+ -.+++++...... ....+++|
T Consensus 11 ~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~~~~h--~~i~~~~~~~~~~~~~~~~~~~~lv~ 88 (275)
T cd06608 11 VEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDEEEEIKEEYNILRKYSNH--PNIATFYGAFIKKNPPGNDDQLWLVM 88 (275)
T ss_pred eeeecCCCCeEEEEEEECCCCcEEEEEEEecCchhHHHHHHHHHHHHHhcCC--CChheEEEEEEecCCCCcceEEEEEE
Confidence 4667778778899988742 378888876432 24567888888887554 3455565443210 23579999
Q ss_pred ecccCCCC
Q 022304 98 EFIEFGSS 105 (299)
Q Consensus 98 e~l~G~~~ 105 (299)
++++|..+
T Consensus 89 e~~~~~~L 96 (275)
T cd06608 89 ELCGGGSV 96 (275)
T ss_pred EcCCCCcH
Confidence 99998743
No 197
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=97.70 E-value=0.00068 Score=57.62 Aligned_cols=77 Identities=19% Similarity=0.126 Sum_probs=51.7
Q ss_pred eeeeeeCCccccceEEEEeC-CccEEEEecCCC--CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEeccc
Q 022304 25 TKICPVGGGCINLASRYGTD-AGSFFVKTNRSI--GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE 101 (299)
Q Consensus 25 ~~~~~~~~G~~n~~y~v~~~-~g~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~ 101 (299)
.-.+.++.|..+.+|++... +..+.+|..... ....+..|.+.++.+.. ..+++++..... .+..++++++++
T Consensus 7 ~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~l~~---~~i~~~~~~~~~-~~~~~~v~e~~~ 82 (256)
T cd05112 7 TLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAMSEEDFIEEAQVMMKLSH---PKLVQLYGVCTE-RSPICLVFEFME 82 (256)
T ss_pred EEEeeecCcccceEEEEEEeCCCeEEEEECCCCCCCHHHHHHHHHHHHhCCC---CCeeeEEEEEcc-CCceEEEEEcCC
Confidence 33567888888899998765 347888977642 22456778888887753 234445544332 467899999999
Q ss_pred CCCC
Q 022304 102 FGSS 105 (299)
Q Consensus 102 G~~~ 105 (299)
|..+
T Consensus 83 ~~~L 86 (256)
T cd05112 83 HGCL 86 (256)
T ss_pred CCcH
Confidence 8743
No 198
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=97.69 E-value=0.00047 Score=61.49 Aligned_cols=72 Identities=18% Similarity=0.299 Sum_probs=44.6
Q ss_pred eeeCCccccceEEE-EeCCc-cEEEEecCCC-----C-----cchHHHHHHHHHHHHhcCCCCCccceeecc-cC-CCce
Q 022304 28 CPVGGGCINLASRY-GTDAG-SFFVKTNRSI-----G-----PSMFEGEALGLGAMYETRTIRAPRPFKVGA-LP-TGGS 93 (299)
Q Consensus 28 ~~~~~G~~n~~y~v-~~~~g-~~vlK~~~~~-----~-----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~-~~-~~~~ 93 (299)
+.+|.|....|-.. +...| .|.+||.... . ...+++|.++|+.|+. |.++..-+ .. ....
T Consensus 178 ~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~H------P~IV~~~d~f~~~ds~ 251 (475)
T KOG0615|consen 178 KTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSH------PNIVRIKDFFEVPDSS 251 (475)
T ss_pred eeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCC------CCEEEEeeeeecCCce
Confidence 45677765554432 23344 6888887531 1 1225789999988864 56664322 11 4567
Q ss_pred EEEEecccCCCC
Q 022304 94 YIIMEFIEFGSS 105 (299)
Q Consensus 94 ~~v~e~l~G~~~ 105 (299)
||||||++|+.+
T Consensus 252 YmVlE~v~GGeL 263 (475)
T KOG0615|consen 252 YMVLEYVEGGEL 263 (475)
T ss_pred EEEEEEecCccH
Confidence 999999999743
No 199
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=97.69 E-value=0.00036 Score=63.34 Aligned_cols=77 Identities=13% Similarity=0.063 Sum_probs=51.9
Q ss_pred eeeeeCCccccceEEEEe---CC----ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCccceeecccCCCceE
Q 022304 26 KICPVGGGCINLASRYGT---DA----GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSY 94 (299)
Q Consensus 26 ~~~~~~~G~~n~~y~v~~---~~----g~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~ 94 (299)
-.+.++.|..+.||++.. .+ ..|.+|...... ...+..|.++++.+..+ -.+++++..... .+..+
T Consensus 42 ~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h--~nIv~~~~~~~~-~~~~~ 118 (374)
T cd05106 42 FGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQH--KNIVNLLGACTH-GGPVL 118 (374)
T ss_pred ehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccC--CceeeEeeEecC-CCCeE
Confidence 356788888889998763 11 158888775321 23466788888888544 245566655433 46789
Q ss_pred EEEecccCCCC
Q 022304 95 IIMEFIEFGSS 105 (299)
Q Consensus 95 ~v~e~l~G~~~ 105 (299)
++|||++|..+
T Consensus 119 lv~ey~~~g~L 129 (374)
T cd05106 119 VITEYCCYGDL 129 (374)
T ss_pred EeHhhccCCcH
Confidence 99999999765
No 200
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=97.69 E-value=0.0012 Score=57.64 Aligned_cols=94 Identities=14% Similarity=0.096 Sum_probs=56.5
Q ss_pred cchHHHHHHhc-CCCc---ceeeeeeeCCccccceEEEEeC--CccEEEEecCCC---CcchHHHHHHHHHHHHhcCCCC
Q 022304 8 DDPIREWILSE-GKAT---HITKICPVGGGCINLASRYGTD--AGSFFVKTNRSI---GPSMFEGEALGLGAMYETRTIR 78 (299)
Q Consensus 8 ~~~i~~~l~~~-~~~~---~~~~~~~~~~G~~n~~y~v~~~--~g~~vlK~~~~~---~~~~~~~E~~~l~~L~~~~~~~ 78 (299)
.+++.+-|... ..+. ...-++.++.|..+.+|++... +..+.+|..... ....+..|..+++.+.. ..
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h---~~ 78 (296)
T cd06654 2 DEEILEKLRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKN---PN 78 (296)
T ss_pred hHHHHHHHHhccccCCcccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCC---CC
Confidence 34555555444 2332 3334567888888999998753 337888866532 12345667777766542 23
Q ss_pred CccceeecccCCCceEEEEecccCCCC
Q 022304 79 APRPFKVGALPTGGSYIIMEFIEFGSS 105 (299)
Q Consensus 79 vP~~~~~~~~~~~~~~~v~e~l~G~~~ 105 (299)
+.+++..... ....+++++|++|..+
T Consensus 79 v~~~~~~~~~-~~~~~lv~e~~~~~~L 104 (296)
T cd06654 79 IVNYLDSYLV-GDELWVVMEYLAGGSL 104 (296)
T ss_pred EeeEEEEEEe-CCEEEEeecccCCCCH
Confidence 4444433222 4688999999998643
No 201
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=97.69 E-value=0.00085 Score=58.35 Aligned_cols=79 Identities=18% Similarity=0.127 Sum_probs=51.3
Q ss_pred eeeeeeCCccccceEEEEeC-Cc-cEEEEecCCC--CcchHHHHHHHHHHHHhcCCCCCccceeecccC----CCceEEE
Q 022304 25 TKICPVGGGCINLASRYGTD-AG-SFFVKTNRSI--GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP----TGGSYII 96 (299)
Q Consensus 25 ~~~~~~~~G~~n~~y~v~~~-~g-~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~----~~~~~~v 96 (299)
.-++.++.|..+.+|++... ++ .+++|..... ....+..|...++.+..+ -.+++++...... .+..+++
T Consensus 25 ~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~~h--~ni~~~~~~~~~~~~~~~~~~~lv 102 (291)
T cd06639 25 EIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDVDEEIEAEYNILQSLPNH--PNVVKFYGMFYKADKLVGGQLWLV 102 (291)
T ss_pred EEEEEeecCCCeEEEEEEECCCCCEEEEEEecccccHHHHHHHHHHHHHHhcCC--CCeEEEEEEEEeccccCCCeeEEE
Confidence 34567788888899998874 33 6888887542 224466788877777544 2455555432211 2468999
Q ss_pred EecccCCCC
Q 022304 97 MEFIEFGSS 105 (299)
Q Consensus 97 ~e~l~G~~~ 105 (299)
+||++|..+
T Consensus 103 ~ey~~~~sL 111 (291)
T cd06639 103 LELCNGGSV 111 (291)
T ss_pred EEECCCCcH
Confidence 999998743
No 202
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=97.68 E-value=0.00065 Score=58.90 Aligned_cols=76 Identities=16% Similarity=0.102 Sum_probs=46.6
Q ss_pred eeeeCCccccceEEEEeCC-c-cEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCCccceeecccC----CCceEE
Q 022304 27 ICPVGGGCINLASRYGTDA-G-SFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP----TGGSYI 95 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~~~-g-~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~----~~~~~~ 95 (299)
++.+|.|..+.||++...+ + .+++|..... .......|...++.|.....-.+.+++...... ....++
T Consensus 5 ~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~~~~l 84 (288)
T cd07863 5 VAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRETKVTL 84 (288)
T ss_pred eeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCceEEE
Confidence 3567888889999997643 3 6788876531 122355788888887642112344444432211 245789
Q ss_pred EEecccC
Q 022304 96 IMEFIEF 102 (299)
Q Consensus 96 v~e~l~G 102 (299)
+++++++
T Consensus 85 v~e~~~~ 91 (288)
T cd07863 85 VFEHVDQ 91 (288)
T ss_pred EEccccc
Confidence 9999875
No 203
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=97.67 E-value=0.00052 Score=59.26 Aligned_cols=74 Identities=14% Similarity=0.025 Sum_probs=49.0
Q ss_pred eeeCCccccceEEEEeC--CccEEEEecCCCCc---chHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEecccC
Q 022304 28 CPVGGGCINLASRYGTD--AGSFFVKTNRSIGP---SMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEF 102 (299)
Q Consensus 28 ~~~~~G~~n~~y~v~~~--~g~~vlK~~~~~~~---~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G 102 (299)
+.++.|..+.+|++... +..+++|....... ..+..|+.+++.+. + -.+++++..... .+..+++||+++|
T Consensus 11 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~-h--~~i~~~~~~~~~-~~~~~lv~e~~~~ 86 (280)
T cd06611 11 GELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECK-H--PNIVGLYEAYFY-ENKLWILIEFCDG 86 (280)
T ss_pred HHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCC-C--CceeEEEEEEec-CCeEEEEeeccCC
Confidence 45677878899999864 23788898764321 23556777777775 2 235555554333 5678999999998
Q ss_pred CCC
Q 022304 103 GSS 105 (299)
Q Consensus 103 ~~~ 105 (299)
..+
T Consensus 87 ~~L 89 (280)
T cd06611 87 GAL 89 (280)
T ss_pred CcH
Confidence 744
No 204
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=97.67 E-value=0.00041 Score=60.51 Aligned_cols=149 Identities=20% Similarity=0.212 Sum_probs=86.9
Q ss_pred eeeeeeCCccccceEEEEe-CCc-cEEEEecCC--C---CcchHHHHHHHHHHHHhcCCCCCccceeecccC-----CCc
Q 022304 25 TKICPVGGGCINLASRYGT-DAG-SFFVKTNRS--I---GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP-----TGG 92 (299)
Q Consensus 25 ~~~~~~~~G~~n~~y~v~~-~~g-~~vlK~~~~--~---~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~-----~~~ 92 (299)
..++++|.|....||+... ..| -+++|.-+- . .+....+|+.+++.|+... .+-+++....+. .+.
T Consensus 14 ~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~--~iv~L~dv~~~~~~~~~~~~ 91 (323)
T KOG0594|consen 14 EKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHAN--HIVRLHDVIHTSNNHRGIGK 91 (323)
T ss_pred HHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCc--ceEEEEeeeeecccccccce
Confidence 4577899999999999876 334 677775542 1 2344568999999997642 233344332221 246
Q ss_pred eEEEEecccCCCCCCcHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCCCCHHHHHHHhhhHHHHHHHHhhcCC
Q 022304 93 SYIIMEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGD 172 (299)
Q Consensus 93 ~~~v~e~l~G~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (299)
-++++|+++-. +-..+..+-... .|.+ . ..+
T Consensus 92 l~lvfe~~d~D--------L~~ymd~~~~~~-----~g~~----------------~-------~~i------------- 122 (323)
T KOG0594|consen 92 LYLVFEFLDRD--------LKKYMDSLPKKP-----QGLP----------------P-------RLI------------- 122 (323)
T ss_pred EEEEEEeeccc--------HHHHHHhccccc-----cCCC----------------H-------HHH-------------
Confidence 78899988653 222222211000 0100 0 000
Q ss_pred hHHHHHHHHHHHHHhccccCCCCCcceeccCCCCCCeeecCCCCeEEEccc-c-ccCCchhh
Q 022304 173 STIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA-C-YYGHNEAE 232 (299)
Q Consensus 173 ~~~~~~~~~~~~~l~~~l~~~~~~~~liHgDl~~~Nvl~~~~~~~~iID~~-~-~~g~~~~D 232 (299)
...+.+++..+.-. . ..+++|+|++|.|+|++++|...|+||. + .++-|.-.
T Consensus 123 ---k~~m~Qll~gl~~~-H----~~~IlHRDLKPQNlLi~~~G~lKlaDFGlAra~~ip~~~ 176 (323)
T KOG0594|consen 123 ---KSFMRQLLRGLAFL-H----SHGILHRDLKPQNLLISSSGVLKLADFGLARAFSIPMRT 176 (323)
T ss_pred ---HHHHHHHHHHHHHH-H----hCCeecccCCcceEEECCCCcEeeeccchHHHhcCCccc
Confidence 12223344433322 2 4699999999999999999888999985 3 46645443
No 205
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=97.67 E-value=0.00089 Score=56.63 Aligned_cols=75 Identities=15% Similarity=0.084 Sum_probs=48.8
Q ss_pred eeeeCCccccceEEEEeC--CccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEec
Q 022304 27 ICPVGGGCINLASRYGTD--AGSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 99 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~~--~g~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~ 99 (299)
.+.++.|..+.+|++... +..|++|..... ....+..|.++++.+.. ..+++++..... .+..++++++
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~---~~~~~~~~~~~~-~~~~~lv~e~ 80 (258)
T cd08215 5 IKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNH---PNIIKYYESFEE-KGKLCIVMEY 80 (258)
T ss_pred EeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCC---CChhheEEEEec-CCEEEEEEEe
Confidence 356777777899998875 348889887642 12345677777777652 223444433222 4688999999
Q ss_pred ccCCCC
Q 022304 100 IEFGSS 105 (299)
Q Consensus 100 l~G~~~ 105 (299)
++|..+
T Consensus 81 ~~~~~L 86 (258)
T cd08215 81 ADGGDL 86 (258)
T ss_pred cCCCcH
Confidence 998743
No 206
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=97.67 E-value=0.00045 Score=58.79 Aligned_cols=71 Identities=13% Similarity=0.066 Sum_probs=45.0
Q ss_pred CCccccceEEEEeCC-c-cEEEEecCCCC------cchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEecccC
Q 022304 31 GGGCINLASRYGTDA-G-SFFVKTNRSIG------PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEF 102 (299)
Q Consensus 31 ~~G~~n~~y~v~~~~-g-~~vlK~~~~~~------~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G 102 (299)
+.|..+.+|++...+ | .+++|...... ...+..|...++.+.. ..+++++..... ....++++++++|
T Consensus 2 g~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h---~~i~~~~~~~~~-~~~~~lv~e~~~~ 77 (265)
T cd05579 2 SKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQS---PYVVKLYYSFQG-KKNLYLVMEYLPG 77 (265)
T ss_pred CCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCC---cchhHHHHheec-CcEEEEEEecCCC
Confidence 556677899998753 3 89999876421 2345566666666642 234444433222 4578999999998
Q ss_pred CCC
Q 022304 103 GSS 105 (299)
Q Consensus 103 ~~~ 105 (299)
.++
T Consensus 78 ~~L 80 (265)
T cd05579 78 GDL 80 (265)
T ss_pred CcH
Confidence 644
No 207
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=97.67 E-value=0.00067 Score=58.53 Aligned_cols=77 Identities=25% Similarity=0.183 Sum_probs=49.5
Q ss_pred eeeeeCCccccceEEEEeC------CccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCccceeecccC-CCceE
Q 022304 26 KICPVGGGCINLASRYGTD------AGSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALP-TGGSY 94 (299)
Q Consensus 26 ~~~~~~~G~~n~~y~v~~~------~g~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~-~~~~~ 94 (299)
-++.++.|..+.+|++... +..+++|...... ...+..|...++.+.. ..+++++...... ....+
T Consensus 8 ~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~---~~i~~~~~~~~~~~~~~~~ 84 (284)
T cd05038 8 FIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDH---ENIVKYKGVCEKPGGRSLR 84 (284)
T ss_pred hheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCC---CChheEEeeeecCCCCceE
Confidence 3467888888999998753 2278899876532 2346777777776642 2344555443221 23679
Q ss_pred EEEecccCCCC
Q 022304 95 IIMEFIEFGSS 105 (299)
Q Consensus 95 ~v~e~l~G~~~ 105 (299)
++|||++|..+
T Consensus 85 lv~e~~~~~~l 95 (284)
T cd05038 85 LIMEYLPSGSL 95 (284)
T ss_pred EEEecCCCCCH
Confidence 99999988744
No 208
>PHA03207 serine/threonine kinase US3; Provisional
Probab=97.67 E-value=0.00042 Score=63.33 Aligned_cols=71 Identities=8% Similarity=-0.083 Sum_probs=47.3
Q ss_pred eeeeeCCccccceEEEEeCC----ccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEeccc
Q 022304 26 KICPVGGGCINLASRYGTDA----GSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE 101 (299)
Q Consensus 26 ~~~~~~~G~~n~~y~v~~~~----g~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~ 101 (299)
-+..++.|....||++...+ ..+++|..... ....+|..+++.|.. -.+++++..... ....+++|++..
T Consensus 96 i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~--~~~~~E~~il~~l~h---~~iv~~~~~~~~-~~~~~lv~e~~~ 169 (392)
T PHA03207 96 ILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG--KTPGREIDILKTISH---RAIINLIHAYRW-KSTVCMVMPKYK 169 (392)
T ss_pred EEEeecCCCCeEEEEEEEcCCccceeEEEEecccc--ccHHHHHHHHHhcCC---CCccceeeeEee-CCEEEEEehhcC
Confidence 35678889889999986532 26788876542 235689999988853 234455543322 457899999886
Q ss_pred C
Q 022304 102 F 102 (299)
Q Consensus 102 G 102 (299)
+
T Consensus 170 ~ 170 (392)
T PHA03207 170 C 170 (392)
T ss_pred C
Confidence 5
No 209
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=97.66 E-value=0.00057 Score=59.29 Aligned_cols=76 Identities=13% Similarity=0.138 Sum_probs=50.8
Q ss_pred eeeeeCCccccceEEEEeC--CccEEEEecCCCC--cchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEeccc
Q 022304 26 KICPVGGGCINLASRYGTD--AGSFFVKTNRSIG--PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE 101 (299)
Q Consensus 26 ~~~~~~~G~~n~~y~v~~~--~g~~vlK~~~~~~--~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~ 101 (299)
-...++.|....+|++... +..+++|...... ...+..|.+.++.+.. ..+++++..... ....++++++++
T Consensus 23 ~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~---~~i~~~~~~~~~-~~~~~lv~e~~~ 98 (286)
T cd06614 23 NLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQNKELIINEILIMKDCKH---PNIVDYYDSYLV-GDELWVVMEYMD 98 (286)
T ss_pred HhHhccCCCCeEEEEEEEccCCcEEEEEEEecCchhHHHHHHHHHHHHHCCC---CCeeEEEEEEEE-CCEEEEEEeccC
Confidence 3466787877889998875 4488999876432 3345678877776643 234445543322 468899999999
Q ss_pred CCCC
Q 022304 102 FGSS 105 (299)
Q Consensus 102 G~~~ 105 (299)
|..+
T Consensus 99 ~~~L 102 (286)
T cd06614 99 GGSL 102 (286)
T ss_pred CCcH
Confidence 8644
No 210
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=97.66 E-value=0.00078 Score=60.35 Aligned_cols=80 Identities=18% Similarity=0.175 Sum_probs=51.4
Q ss_pred eeeeeeeCCccccceEEEEe------CCc-cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCccceeecccCCCc
Q 022304 24 ITKICPVGGGCINLASRYGT------DAG-SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGG 92 (299)
Q Consensus 24 ~~~~~~~~~G~~n~~y~v~~------~~g-~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~ 92 (299)
..-.+.+|.|..+.||++.. ..+ .+.+|+..... ...+..|..++..+..+ -.+++++.......+.
T Consensus 9 ~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h--~niv~~~~~~~~~~~~ 86 (343)
T cd05103 9 LKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH--LNVVNLLGACTKPGGP 86 (343)
T ss_pred hcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCC--ccHhhhcceeecCCCc
Confidence 33456788898899999862 122 68888875421 12356788888888543 2345555433221346
Q ss_pred eEEEEecccCCCC
Q 022304 93 SYIIMEFIEFGSS 105 (299)
Q Consensus 93 ~~~v~e~l~G~~~ 105 (299)
.+++|||++|..+
T Consensus 87 ~~lv~ey~~~g~L 99 (343)
T cd05103 87 LMVIVEFCKFGNL 99 (343)
T ss_pred eEEEEeccCCCcH
Confidence 7899999999765
No 211
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=97.65 E-value=0.00046 Score=61.38 Aligned_cols=27 Identities=26% Similarity=0.193 Sum_probs=24.2
Q ss_pred cceeccCCCCCCeeecCCCCeEEEccc
Q 022304 197 PCLLHGDLWSGNISSDKNGEPVILDPA 223 (299)
Q Consensus 197 ~~liHgDl~~~Nvl~~~~~~~~iID~~ 223 (299)
..++|+|++|.|||++.++.+.|+|+.
T Consensus 115 ~~ivHrDlkp~Nili~~~~~~kl~Dfg 141 (330)
T cd05586 115 YDIVYRDLKPENILLDATGHIALCDFG 141 (330)
T ss_pred CCeEeccCCHHHeEECCCCCEEEecCC
Confidence 479999999999999988888899974
No 212
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=97.65 E-value=0.00062 Score=57.91 Aligned_cols=75 Identities=16% Similarity=0.096 Sum_probs=45.8
Q ss_pred eeeCCccccceEEEEeC-C-ccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCCccceeecccC-CCceEEEEec
Q 022304 28 CPVGGGCINLASRYGTD-A-GSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP-TGGSYIIMEF 99 (299)
Q Consensus 28 ~~~~~G~~n~~y~v~~~-~-g~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~-~~~~~~v~e~ 99 (299)
..++.|..+.+|++... . ..+++|..... ....+..|...++.+... .+++++...... ....++++|+
T Consensus 6 ~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~---~i~~~~~~~~~~~~~~~~~~~e~ 82 (265)
T cd08217 6 ETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHP---NIVRYYDRIIDRSNQTLYIVMEY 82 (265)
T ss_pred eeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCC---ccceeeeeeecCCCCEEEEEehh
Confidence 46777878899998763 2 36888876431 123355677777666432 234444322211 3467899999
Q ss_pred ccCCCC
Q 022304 100 IEFGSS 105 (299)
Q Consensus 100 l~G~~~ 105 (299)
++|.++
T Consensus 83 ~~~~~L 88 (265)
T cd08217 83 CEGGDL 88 (265)
T ss_pred ccCCCH
Confidence 998744
No 213
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=97.65 E-value=0.00058 Score=59.14 Aligned_cols=77 Identities=19% Similarity=0.142 Sum_probs=48.8
Q ss_pred eeeeeCCccccceEEEEe-----CCc-cEEEEecCCCC---cchHHHHHHHHHHHHhcCCCCCccceeecccC-CCceEE
Q 022304 26 KICPVGGGCINLASRYGT-----DAG-SFFVKTNRSIG---PSMFEGEALGLGAMYETRTIRAPRPFKVGALP-TGGSYI 95 (299)
Q Consensus 26 ~~~~~~~G~~n~~y~v~~-----~~g-~~vlK~~~~~~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~-~~~~~~ 95 (299)
-++.++.|..+.+|++.. ..+ .+++|...... ...+..|.++++.+.. -.+++.+...... ....++
T Consensus 8 ~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h---~~iv~~~~~~~~~~~~~~~l 84 (284)
T cd05081 8 FIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQH---DNIVKYKGVCYSAGRRNLRL 84 (284)
T ss_pred eeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCC---CCeeEEEEEEccCCCCceEE
Confidence 356788888889999763 123 68888875432 2346678887777742 2344444432211 346789
Q ss_pred EEecccCCCC
Q 022304 96 IMEFIEFGSS 105 (299)
Q Consensus 96 v~e~l~G~~~ 105 (299)
++||++|.++
T Consensus 85 v~e~~~~~~L 94 (284)
T cd05081 85 VMEYLPYGSL 94 (284)
T ss_pred EEEecCCCCH
Confidence 9999998754
No 214
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=97.64 E-value=0.00038 Score=59.46 Aligned_cols=75 Identities=12% Similarity=-0.013 Sum_probs=48.6
Q ss_pred eeeeCCccccceEEEEeC-Cc-cEEEEecCC------CCcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEe
Q 022304 27 ICPVGGGCINLASRYGTD-AG-SFFVKTNRS------IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 98 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~~-~g-~~vlK~~~~------~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e 98 (299)
.+.++.|..+.+|++... +| .+++|.... .....+..|+..++.+.. ..+++++..... .+..+++||
T Consensus 7 ~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~---~~i~~~~~~~~~-~~~~~lv~e 82 (267)
T cd08224 7 EKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDH---PNVIKYLASFIE-NNELNIVLE 82 (267)
T ss_pred eeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCC---CCeeeeeeeeec-CCeEEEEEe
Confidence 356788888899998875 33 788886542 113446678877777643 234444443322 467899999
Q ss_pred cccCCCC
Q 022304 99 FIEFGSS 105 (299)
Q Consensus 99 ~l~G~~~ 105 (299)
|++|.++
T Consensus 83 ~~~~~~L 89 (267)
T cd08224 83 LADAGDL 89 (267)
T ss_pred cCCCCCH
Confidence 9998744
No 215
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=97.64 E-value=0.0009 Score=60.29 Aligned_cols=75 Identities=19% Similarity=0.171 Sum_probs=50.0
Q ss_pred eeeCCccccceEEEEeCCcc-EEEEecCCCC-----cchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEeccc
Q 022304 28 CPVGGGCINLASRYGTDAGS-FFVKTNRSIG-----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE 101 (299)
Q Consensus 28 ~~~~~G~~n~~y~v~~~~g~-~vlK~~~~~~-----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~ 101 (299)
+.+|.|....||+..-.+.. +.+|+..... ...+..|+.++..|+.- .|-+.+.......+...+||||++
T Consensus 47 ~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~Hp---NIV~f~G~~~~~~~~~~iVtEy~~ 123 (362)
T KOG0192|consen 47 EVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHP---NIVQFYGACTSPPGSLCIVTEYMP 123 (362)
T ss_pred hhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCC---CeeeEEEEEcCCCCceEEEEEeCC
Confidence 34788888999988776665 7888876422 23688899988887541 223344443321235799999999
Q ss_pred CCCC
Q 022304 102 FGSS 105 (299)
Q Consensus 102 G~~~ 105 (299)
|+.+
T Consensus 124 ~GsL 127 (362)
T KOG0192|consen 124 GGSL 127 (362)
T ss_pred CCcH
Confidence 9744
No 216
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=97.63 E-value=0.00067 Score=58.29 Aligned_cols=75 Identities=16% Similarity=0.068 Sum_probs=49.1
Q ss_pred eeeeCCccccceEEEEeC-Cc-cEEEEecCCC----Cc---------chHHHHHHHHHHHHhcCCCCCccceeecccCCC
Q 022304 27 ICPVGGGCINLASRYGTD-AG-SFFVKTNRSI----GP---------SMFEGEALGLGAMYETRTIRAPRPFKVGALPTG 91 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~~-~g-~~vlK~~~~~----~~---------~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~ 91 (299)
.+.++.|..+.+|+.... ++ .+.+|..... .. ..+..|...++.+.. ..+++++..... ..
T Consensus 6 ~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~ 81 (272)
T cd06629 6 GELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDH---LNIVQYLGFETT-EE 81 (272)
T ss_pred cceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCC---CCcceEEEEecc-CC
Confidence 457888888899998653 34 7888865421 01 235567777777742 235566655443 46
Q ss_pred ceEEEEecccCCCC
Q 022304 92 GSYIIMEFIEFGSS 105 (299)
Q Consensus 92 ~~~~v~e~l~G~~~ 105 (299)
..++++|+++|.++
T Consensus 82 ~~~lv~e~~~~~~L 95 (272)
T cd06629 82 YLSIFLEYVPGGSI 95 (272)
T ss_pred ceEEEEecCCCCcH
Confidence 78999999998744
No 217
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=97.63 E-value=0.00099 Score=57.91 Aligned_cols=74 Identities=11% Similarity=-0.008 Sum_probs=49.0
Q ss_pred eeeeeeCCccccceEEEEeC--CccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEe
Q 022304 25 TKICPVGGGCINLASRYGTD--AGSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 98 (299)
Q Consensus 25 ~~~~~~~~G~~n~~y~v~~~--~g~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e 98 (299)
.-++.++.|..+.||++... ++.+++|...... ...+..|...++.+.. ..+++++..... .+..++++|
T Consensus 8 ~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h---~ni~~~~~~~~~-~~~~~lv~e 83 (291)
T cd07870 8 LNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKH---ANIVLLHDIIHT-KETLTFVFE 83 (291)
T ss_pred EEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCC---CCEeEEEEEEec-CCeEEEEEe
Confidence 34567888888899998653 4489999875321 1245678887777743 234455544332 467899999
Q ss_pred cccC
Q 022304 99 FIEF 102 (299)
Q Consensus 99 ~l~G 102 (299)
++++
T Consensus 84 ~~~~ 87 (291)
T cd07870 84 YMHT 87 (291)
T ss_pred cccC
Confidence 9965
No 218
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=97.63 E-value=0.00066 Score=58.52 Aligned_cols=72 Identities=17% Similarity=0.202 Sum_probs=46.3
Q ss_pred eeeeCCccccceEEEEeC-Cc-cEEEEecCCCC-----cchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEec
Q 022304 27 ICPVGGGCINLASRYGTD-AG-SFFVKTNRSIG-----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 99 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~~-~g-~~vlK~~~~~~-----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~ 99 (299)
++.++.|..+.+|++... ++ .+++|...... ...+..|...++.+.. -.+.+++..... ....++++|+
T Consensus 4 ~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~---~~i~~~~~~~~~-~~~~~~v~e~ 79 (283)
T cd05118 4 LGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNH---PNIIKLLDVFRH-KGDLYLVFEF 79 (283)
T ss_pred ceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcC---CCcchHHHhhcc-CCCEEEEEec
Confidence 356777878899998764 33 78888765421 2345667777777752 234444433322 4678999999
Q ss_pred ccC
Q 022304 100 IEF 102 (299)
Q Consensus 100 l~G 102 (299)
.++
T Consensus 80 ~~~ 82 (283)
T cd05118 80 MDT 82 (283)
T ss_pred cCC
Confidence 876
No 219
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=97.62 E-value=0.00057 Score=59.09 Aligned_cols=72 Identities=19% Similarity=0.121 Sum_probs=47.9
Q ss_pred eeeeCCccccceEEEEeC--CccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEec
Q 022304 27 ICPVGGGCINLASRYGTD--AGSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 99 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~~--~g~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~ 99 (299)
++.++.|..+.+|+++.. +..+++|..... ....+..|+..++.+.. -.+++++..... .+..+++|+|
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~~v~e~ 80 (285)
T cd07861 5 IEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQH---PNIVCLQDVLMQ-ESRLYLIFEF 80 (285)
T ss_pred eeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCC---CCEeeeEEEEee-CCeEEEEEec
Confidence 467888888899999864 237888876531 12346678887777752 234555544332 4678999999
Q ss_pred ccC
Q 022304 100 IEF 102 (299)
Q Consensus 100 l~G 102 (299)
++|
T Consensus 81 ~~~ 83 (285)
T cd07861 81 LSM 83 (285)
T ss_pred CCC
Confidence 975
No 220
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=97.62 E-value=0.00055 Score=59.73 Aligned_cols=72 Identities=11% Similarity=-0.031 Sum_probs=45.3
Q ss_pred eeeeCCccccceEEEEeC--CccEEEEecCCCCc--------chHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEE
Q 022304 27 ICPVGGGCINLASRYGTD--AGSFFVKTNRSIGP--------SMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII 96 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~~--~g~~vlK~~~~~~~--------~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v 96 (299)
.+.++.|..+.+|+.... +..+++|....... ..+..|+..++.+.. ..+.+++..... ....+++
T Consensus 5 ~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h---~~i~~~~~~~~~-~~~~~lv 80 (298)
T cd07841 5 GKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKH---PNIIGLLDVFGH-KSNINLV 80 (298)
T ss_pred eeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCC---CCChhhhheeec-CCEEEEE
Confidence 346788888899998753 33889988764211 123457776766642 234444443332 4678999
Q ss_pred EecccCC
Q 022304 97 MEFIEFG 103 (299)
Q Consensus 97 ~e~l~G~ 103 (299)
||++ +.
T Consensus 81 ~e~~-~~ 86 (298)
T cd07841 81 FEFM-ET 86 (298)
T ss_pred Eccc-CC
Confidence 9999 44
No 221
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=97.62 E-value=0.0015 Score=55.14 Aligned_cols=74 Identities=16% Similarity=0.032 Sum_probs=49.3
Q ss_pred eeeeCCccccceEEEEeCC--ccEEEEecCCCC-----cchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEec
Q 022304 27 ICPVGGGCINLASRYGTDA--GSFFVKTNRSIG-----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 99 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~~~--g~~vlK~~~~~~-----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~ 99 (299)
.+.++.|....+|+..... ..|++|...... ...+..|.+.+..+.. ..+++++..... .+..++++++
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~---~~i~~~~~~~~~-~~~~~~v~e~ 80 (254)
T cd06627 5 GDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKH---PNIVKYIGSIET-SDSLYIILEY 80 (254)
T ss_pred eeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCC---CCccEEEEEEEe-CCEEEEEEec
Confidence 4677888888999987642 378999886532 2345677777777643 234455544332 4678999999
Q ss_pred ccCCC
Q 022304 100 IEFGS 104 (299)
Q Consensus 100 l~G~~ 104 (299)
++|..
T Consensus 81 ~~~~~ 85 (254)
T cd06627 81 AENGS 85 (254)
T ss_pred CCCCc
Confidence 98863
No 222
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=97.61 E-value=0.0016 Score=56.58 Aligned_cols=79 Identities=13% Similarity=0.149 Sum_probs=50.7
Q ss_pred ceeeeeeeCCccccceEEEEeC-C-ccEEEEecCCC---CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEE
Q 022304 23 HITKICPVGGGCINLASRYGTD-A-GSFFVKTNRSI---GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM 97 (299)
Q Consensus 23 ~~~~~~~~~~G~~n~~y~v~~~-~-g~~vlK~~~~~---~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~ 97 (299)
.......++.|..+.+|+.... + ..+++|..... ....+..|...++.+.. -.+.+++..... .+..++++
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h---~~vv~~~~~~~~-~~~~~~v~ 95 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQH---PNIVEMYSSYLV-GDELWVVM 95 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCC---CChheEEEEEEc-CCeEEEEE
Confidence 4556788999988999998753 3 37888866421 12335567766666642 234445543222 46789999
Q ss_pred ecccCCCC
Q 022304 98 EFIEFGSS 105 (299)
Q Consensus 98 e~l~G~~~ 105 (299)
++++|..+
T Consensus 96 e~~~~~~L 103 (285)
T cd06648 96 EFLEGGAL 103 (285)
T ss_pred eccCCCCH
Confidence 99998744
No 223
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=97.61 E-value=0.00074 Score=57.57 Aligned_cols=75 Identities=21% Similarity=0.152 Sum_probs=49.5
Q ss_pred eeeeCCccccceEEEEeCCc-cEEEEecCCCC---cchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEecccC
Q 022304 27 ICPVGGGCINLASRYGTDAG-SFFVKTNRSIG---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEF 102 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~~~g-~~vlK~~~~~~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G 102 (299)
.+.++.|..+.+|++...++ .+++|...... ...+..|...++.+.. -.+.+++..... ....+++||+.+|
T Consensus 11 ~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~---~~i~~~~~~~~~-~~~~~lv~e~~~~ 86 (261)
T cd05148 11 ERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRH---KHLISLFAVCSV-GEPVYIITELMEK 86 (261)
T ss_pred hhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCC---cchhheeeeEec-CCCeEEEEeeccc
Confidence 34567788889999887555 77888876422 3456677777766642 234445544332 4578999999998
Q ss_pred CCC
Q 022304 103 GSS 105 (299)
Q Consensus 103 ~~~ 105 (299)
.++
T Consensus 87 ~~L 89 (261)
T cd05148 87 GSL 89 (261)
T ss_pred CCH
Confidence 744
No 224
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=97.61 E-value=0.00047 Score=61.16 Aligned_cols=27 Identities=30% Similarity=0.294 Sum_probs=24.1
Q ss_pred cceeccCCCCCCeeecCCCCeEEEccc
Q 022304 197 PCLLHGDLWSGNISSDKNGEPVILDPA 223 (299)
Q Consensus 197 ~~liHgDl~~~Nvl~~~~~~~~iID~~ 223 (299)
..++|+|++|+|||++.++.+.|+|+.
T Consensus 115 ~givH~dikp~NIll~~~~~~kl~Dfg 141 (323)
T cd05575 115 LNIIYRDLKPENILLDSQGHVVLTDFG 141 (323)
T ss_pred CCeEeCCCCHHHeEECCCCcEEEeccC
Confidence 479999999999999988888899975
No 225
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=97.60 E-value=0.0024 Score=54.29 Aligned_cols=76 Identities=16% Similarity=0.042 Sum_probs=49.9
Q ss_pred eeeeeCCccccceEEEEeC--CccEEEEecCCC---CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEecc
Q 022304 26 KICPVGGGCINLASRYGTD--AGSFFVKTNRSI---GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI 100 (299)
Q Consensus 26 ~~~~~~~G~~n~~y~v~~~--~g~~vlK~~~~~---~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l 100 (299)
-.+.++.|..+.+|++... +..+++|..... ....+..|..+++.+.. ..+.+++..... .+..+++|+++
T Consensus 7 ~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h---~~i~~~~~~~~~-~~~~~l~~e~~ 82 (262)
T cd06613 7 LIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRH---PNIVAYFGSYLR-RDKLWIVMEYC 82 (262)
T ss_pred EEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCC---CChhceEEEEEe-CCEEEEEEeCC
Confidence 4567888888899998764 337888987642 22446677777776643 223444433222 46789999999
Q ss_pred cCCCC
Q 022304 101 EFGSS 105 (299)
Q Consensus 101 ~G~~~ 105 (299)
+|..+
T Consensus 83 ~~~~l 87 (262)
T cd06613 83 GGGSL 87 (262)
T ss_pred CCCcH
Confidence 98754
No 226
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=97.60 E-value=0.0011 Score=58.59 Aligned_cols=91 Identities=12% Similarity=0.043 Sum_probs=54.9
Q ss_pred cchHHHHHHhcCCCcceeeeeeeCCccccceEEEEeC-Cc-cEEEEecCCCC---c---chHHHHHHHHHHHHhcCCCCC
Q 022304 8 DDPIREWILSEGKATHITKICPVGGGCINLASRYGTD-AG-SFFVKTNRSIG---P---SMFEGEALGLGAMYETRTIRA 79 (299)
Q Consensus 8 ~~~i~~~l~~~~~~~~~~~~~~~~~G~~n~~y~v~~~-~g-~~vlK~~~~~~---~---~~~~~E~~~l~~L~~~~~~~v 79 (299)
..++..+......+.-......++.|..+.+|++... .+ .+++|...... . ..+..|...++.+.. ..+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h---~~i 83 (313)
T cd06633 7 DPEIADLFYKDDPEEIFVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKH---PNT 83 (313)
T ss_pred CHHHHHHhccCCHHHHhhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCC---CCC
Confidence 3455555444433333444567888988899998753 33 78888765321 1 234567777776642 234
Q ss_pred ccceeecccCCCceEEEEecccC
Q 022304 80 PRPFKVGALPTGGSYIIMEFIEF 102 (299)
Q Consensus 80 P~~~~~~~~~~~~~~~v~e~l~G 102 (299)
++.+..... ....+++|||+.|
T Consensus 84 v~~~~~~~~-~~~~~lv~e~~~~ 105 (313)
T cd06633 84 IEYKGCYLK-EHTAWLVMEYCLG 105 (313)
T ss_pred ccEEEEEEe-CCEEEEEEecCCC
Confidence 445544332 4578999999976
No 227
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=97.60 E-value=0.00088 Score=58.44 Aligned_cols=74 Identities=19% Similarity=0.124 Sum_probs=49.7
Q ss_pred eeeCCccccceEEEEeCC-------------c---cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCccceeecc
Q 022304 28 CPVGGGCINLASRYGTDA-------------G---SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGA 87 (299)
Q Consensus 28 ~~~~~G~~n~~y~v~~~~-------------g---~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~ 87 (299)
+.++.|..+.||++...+ + .+.+|..+... ...+..|+++++.+.. ..+++++....
T Consensus 11 ~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h---~~i~~~~~~~~ 87 (295)
T cd05097 11 EKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKN---PNIIRLLGVCV 87 (295)
T ss_pred hccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCC---CCcCeEEEEEc
Confidence 567888888899876432 1 37788876431 2346678888877753 24566665543
Q ss_pred cCCCceEEEEecccCCCC
Q 022304 88 LPTGGSYIIMEFIEFGSS 105 (299)
Q Consensus 88 ~~~~~~~~v~e~l~G~~~ 105 (299)
. .+..+++|||++|..+
T Consensus 88 ~-~~~~~lv~e~~~~~~L 104 (295)
T cd05097 88 S-DDPLCMITEYMENGDL 104 (295)
T ss_pred C-CCccEEEEecCCCCcH
Confidence 3 4678999999999754
No 228
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=97.60 E-value=0.00046 Score=61.36 Aligned_cols=73 Identities=12% Similarity=0.098 Sum_probs=44.1
Q ss_pred eeeeCCccccceEEEEeC-C-ccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCCccceeecccC----CCceEE
Q 022304 27 ICPVGGGCINLASRYGTD-A-GSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP----TGGSYI 95 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~~-~-g~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~----~~~~~~ 95 (299)
.+.++.|..+.||++... + ..+++|..... ....+..|+.+++.|... .+.+++...... ....++
T Consensus 5 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hp---niv~~~~~~~~~~~~~~~~~~l 81 (338)
T cd07859 5 QEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHP---DIVEIKHIMLPPSRREFKDIYV 81 (338)
T ss_pred EEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCC---CEeeecceEeccCCCCCceEEE
Confidence 356788888899998753 3 37888976421 122356788888877532 222233221110 135799
Q ss_pred EEecccC
Q 022304 96 IMEFIEF 102 (299)
Q Consensus 96 v~e~l~G 102 (299)
+||++++
T Consensus 82 v~e~~~~ 88 (338)
T cd07859 82 VFELMES 88 (338)
T ss_pred EEecCCC
Confidence 9999865
No 229
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=97.59 E-value=0.00067 Score=61.11 Aligned_cols=75 Identities=16% Similarity=0.162 Sum_probs=45.0
Q ss_pred eeeeeCCccccceEEEEeC-Cc-cEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCCccceeecccC-----CCce
Q 022304 26 KICPVGGGCINLASRYGTD-AG-SFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP-----TGGS 93 (299)
Q Consensus 26 ~~~~~~~G~~n~~y~v~~~-~g-~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~-----~~~~ 93 (299)
-++.+|.|..+.||++... .| .+.+|..... ....+..|..+++.+... .+.+++...... ....
T Consensus 25 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~~~~~~~~~~~~~~~~~~ 101 (359)
T cd07876 25 QLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHK---NIISLLNVFTPQKSLEEFQDV 101 (359)
T ss_pred EEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCC---CEeeeeeeeccCCCcccccee
Confidence 3577888988999999763 23 7888876431 123345677777666431 223333221110 1356
Q ss_pred EEEEecccCC
Q 022304 94 YIIMEFIEFG 103 (299)
Q Consensus 94 ~~v~e~l~G~ 103 (299)
+++||+++|.
T Consensus 102 ~lv~e~~~~~ 111 (359)
T cd07876 102 YLVMELMDAN 111 (359)
T ss_pred EEEEeCCCcC
Confidence 8999999763
No 230
>COG3281 Ble Uncharacterized protein, probably involved in trehalose biosynthesis [Carbohydrate transport and metabolism]
Probab=97.59 E-value=0.0018 Score=56.58 Aligned_cols=98 Identities=14% Similarity=0.167 Sum_probs=61.8
Q ss_pred cceeccCCCCCCeeecCCCCeEEEccc--cc--------cCCchhhhhhh--hh--c--------C--------------
Q 022304 197 PCLLHGDLWSGNISSDKNGEPVILDPA--CY--------YGHNEAEFGMS--WC--A--------G-------------- 240 (299)
Q Consensus 197 ~~liHgDl~~~Nvl~~~~~~~~iID~~--~~--------~g~~~~Dla~~--~~--~--------~-------------- 240 (299)
..-+|||||.+.||+.++ ...+|||+ +. -..|.-|++-+ ++ . +
T Consensus 284 l~RvHGDLHLgQVLvt~g-~~~liDFEGEPsRpl~err~~~sPlrDvAgllRS~DYAa~~~~q~~~~~~e~a~e~~~~~~ 362 (438)
T COG3281 284 LQRVHGDLHLGQVLVTPG-RALLIDFEGEPSRPLDERRAPDSPLRDVAGLLRSFDYAAYGPLQALGRTDEAADEQRRGEA 362 (438)
T ss_pred HHHHhccceehheeeeCC-cEEEEecCCCCCCChhhccCCCCchHHHHHHHHHhHHHHHHhhhcccccchhhHHHHHHHH
Confidence 356899999999999874 48899974 21 36789999854 21 0 0
Q ss_pred --C----ChhhHHHhhhhCCCC----CCHHHHHHHHHHHHHH---HHHHhhCcccHHHHHHHHHHHHH
Q 022304 241 --F----GGSFYNSYFEVMPKQ----PGFEKRRDLYMLYHYL---NHYNLFGSGYRSSALSIIDDYLR 295 (299)
Q Consensus 241 --~----~~~f~~~Y~~~~~l~----~~~~~r~~~~~l~~~l---~~~~~~~~~~~~~~~~~~~~~~~ 295 (299)
| ...|+++|....... ++-.+++.+|.+-.+. +.-.-..+.|.+.....+.+++.
T Consensus 363 ~~w~~as~~~fl~gY~aa~~~~g~~~e~s~~lL~~~lLeKAaYEv~YE~~~Rp~wl~IPl~~larl~e 430 (438)
T COG3281 363 RRWVEASRAAFLDGYAAASSIDGLPGEDSAELLAAYLLEKAAYEVGYEARYRPGWLPIPLAALARLTE 430 (438)
T ss_pred HHHHHHHHHHHHHHHHHHhcccCCCcccHHHHHHHHHHHHHHHHHHHhhccCCCceeccHHHHHHHHH
Confidence 0 026999999654332 2336677777665543 22233356776665555555543
No 231
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=97.59 E-value=0.00066 Score=58.84 Aligned_cols=27 Identities=30% Similarity=0.292 Sum_probs=23.7
Q ss_pred cceeccCCCCCCeeecCCCCeEEEccc
Q 022304 197 PCLLHGDLWSGNISSDKNGEPVILDPA 223 (299)
Q Consensus 197 ~~liHgDl~~~Nvl~~~~~~~~iID~~ 223 (299)
..++|+|++|+||+++.++...++|+.
T Consensus 116 ~~ivH~dikp~Nil~~~~~~~~l~dfg 142 (279)
T cd05633 116 RFVVYRDLKPANILLDEHGHVRISDLG 142 (279)
T ss_pred CCcCCCCCCHHHEEECCCCCEEEccCC
Confidence 468999999999999888878899974
No 232
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=97.59 E-value=0.00069 Score=58.36 Aligned_cols=78 Identities=18% Similarity=0.101 Sum_probs=49.4
Q ss_pred eeeeCCccccceEEEEeC-C-ccEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEecc
Q 022304 27 ICPVGGGCINLASRYGTD-A-GSFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI 100 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~~-~-g~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l 100 (299)
++.++.|..+.+|+.... + ..+++|..... ....+..|..+++.+.....-.+.+++..... ....+++||++
T Consensus 6 ~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~-~~~~~lv~e~~ 84 (277)
T cd06917 6 LELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLK-GPRLWIIMEYA 84 (277)
T ss_pred hhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeee-CCEEEEEEecC
Confidence 356778888899998753 3 37888976532 12346678888888863211223334433222 45789999999
Q ss_pred cCCCC
Q 022304 101 EFGSS 105 (299)
Q Consensus 101 ~G~~~ 105 (299)
+|..+
T Consensus 85 ~~~~L 89 (277)
T cd06917 85 EGGSV 89 (277)
T ss_pred CCCcH
Confidence 98743
No 233
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=97.58 E-value=0.00038 Score=59.45 Aligned_cols=75 Identities=20% Similarity=0.053 Sum_probs=47.1
Q ss_pred eeeeCCccccceEEEEeC--CccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEecc
Q 022304 27 ICPVGGGCINLASRYGTD--AGSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI 100 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~~--~g~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l 100 (299)
++.++.|..+.+|++... +..+++|...... ...+..|...++.+. + -.+++++..... .+..+++++++
T Consensus 6 ~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~-~--~~i~~~~~~~~~-~~~~~lv~e~~ 81 (265)
T cd06605 6 LGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCN-S--PYIVGFYGAFYN-NGDISICMEYM 81 (265)
T ss_pred HHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCC-C--Cchhhhheeeec-CCEEEEEEEec
Confidence 456777888889999875 3378888765421 233556776666654 2 233444433322 46889999999
Q ss_pred cCCCC
Q 022304 101 EFGSS 105 (299)
Q Consensus 101 ~G~~~ 105 (299)
+|..+
T Consensus 82 ~~~~L 86 (265)
T cd06605 82 DGGSL 86 (265)
T ss_pred CCCcH
Confidence 98643
No 234
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=97.58 E-value=0.0012 Score=56.06 Aligned_cols=74 Identities=19% Similarity=0.118 Sum_probs=47.1
Q ss_pred eeeCCccccceEEEEeCC--ccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEecc
Q 022304 28 CPVGGGCINLASRYGTDA--GSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI 100 (299)
Q Consensus 28 ~~~~~G~~n~~y~v~~~~--g~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l 100 (299)
..++.|..+.+|+++... ..+++|..... ....+..|...++.+.. -.+.+++..... .+..++++||.
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~lv~e~~ 81 (256)
T cd08529 6 NKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDS---SYIIRYYESFLD-KGKLNIVMEYA 81 (256)
T ss_pred EEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCC---CCeehheeeecc-CCEEEEEEEeC
Confidence 557778778899998742 37888876421 12345567776666642 234444444332 46789999999
Q ss_pred cCCCC
Q 022304 101 EFGSS 105 (299)
Q Consensus 101 ~G~~~ 105 (299)
+|.++
T Consensus 82 ~~~~L 86 (256)
T cd08529 82 ENGDL 86 (256)
T ss_pred CCCcH
Confidence 98743
No 235
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=97.58 E-value=0.00069 Score=58.86 Aligned_cols=75 Identities=12% Similarity=0.059 Sum_probs=46.9
Q ss_pred eeeeCCccccceEEEEeC-Cc-cEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEe
Q 022304 27 ICPVGGGCINLASRYGTD-AG-SFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 98 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~~-~g-~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e 98 (299)
+..++.|..+.||++... ++ .+.+|..... ....+..|+.+++.|... .++..+..... ....+++|+
T Consensus 5 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~---~iv~~~~~~~~-~~~~~lv~e 80 (285)
T cd05605 5 YRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSR---FVVSLAYAYET-KDALCLVLT 80 (285)
T ss_pred EEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCC---CEeeeeeeecC-CCeEEEEEe
Confidence 456788888999998864 33 6778876431 112345688888777431 22333333222 457899999
Q ss_pred cccCCCC
Q 022304 99 FIEFGSS 105 (299)
Q Consensus 99 ~l~G~~~ 105 (299)
+++|..+
T Consensus 81 ~~~~~~L 87 (285)
T cd05605 81 LMNGGDL 87 (285)
T ss_pred ccCCCcH
Confidence 9998744
No 236
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=97.57 E-value=0.00091 Score=57.87 Aligned_cols=72 Identities=14% Similarity=0.016 Sum_probs=43.4
Q ss_pred eCCccccceEEEEeCC-c-cEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEeccc
Q 022304 30 VGGGCINLASRYGTDA-G-SFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE 101 (299)
Q Consensus 30 ~~~G~~n~~y~v~~~~-g-~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~ 101 (299)
+|.|..+.||++.... | .|.+|..... .......|.++++.+.. -.+.+++..... ....+++||+++
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~h---p~i~~~~~~~~~-~~~~~lv~e~~~ 76 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNS---PFIVNLAYAFES-KTHLCLVMSLMN 76 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCC---CcEEEEEEEEec-CCeEEEEEecCC
Confidence 4567778999988642 3 7888866421 11223457777777742 123333332222 467899999999
Q ss_pred CCCC
Q 022304 102 FGSS 105 (299)
Q Consensus 102 G~~~ 105 (299)
|..+
T Consensus 77 g~~L 80 (277)
T cd05607 77 GGDL 80 (277)
T ss_pred CCCH
Confidence 8744
No 237
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=97.57 E-value=0.00053 Score=59.55 Aligned_cols=76 Identities=12% Similarity=0.001 Sum_probs=48.4
Q ss_pred eeeeCCccccceEEEEeC----C-ccEEEEecCCC-------CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceE
Q 022304 27 ICPVGGGCINLASRYGTD----A-GSFFVKTNRSI-------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSY 94 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~~----~-g~~vlK~~~~~-------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~ 94 (299)
.+.++.|..+.+|++... + ..+.+|..... ....+..|..++..+..+ -.+++++..... ....+
T Consensus 5 ~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~--~~i~~~~~~~~~-~~~~~ 81 (288)
T cd05583 5 LRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRC--PFLVTLHYAFQT-DTKLH 81 (288)
T ss_pred EEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCC--cchhhhheeeec-CCEEE
Confidence 466888888899998742 2 26888876531 123456788888877654 233444433222 45788
Q ss_pred EEEecccCCCC
Q 022304 95 IIMEFIEFGSS 105 (299)
Q Consensus 95 ~v~e~l~G~~~ 105 (299)
++|||++|..+
T Consensus 82 lv~e~~~~~~L 92 (288)
T cd05583 82 LILDYVNGGEL 92 (288)
T ss_pred EEEecCCCCcH
Confidence 99999988643
No 238
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=97.57 E-value=0.00073 Score=58.39 Aligned_cols=73 Identities=16% Similarity=0.142 Sum_probs=47.6
Q ss_pred eeeCCccccceEEEEeC-Cc-cEEEEecCCCC-----cchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEecc
Q 022304 28 CPVGGGCINLASRYGTD-AG-SFFVKTNRSIG-----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI 100 (299)
Q Consensus 28 ~~~~~G~~n~~y~v~~~-~g-~~vlK~~~~~~-----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l 100 (299)
..++.|..+.+|++... +| .+++|...... ...+..|..+++.+. + -.+++++..... ....+++++++
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~-~--~~i~~~~~~~~~-~~~~~~v~e~~ 81 (286)
T cd07832 6 GRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQ-H--PYVVKLLDVFPH-GSGFVLVMEYM 81 (286)
T ss_pred eecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCC-C--CCCcceeeEEec-CCeeEEEeccc
Confidence 45788888899998863 33 78889875321 234667887777775 2 234555544332 45789999999
Q ss_pred cCCCC
Q 022304 101 EFGSS 105 (299)
Q Consensus 101 ~G~~~ 105 (299)
|.++
T Consensus 82 -~~~L 85 (286)
T cd07832 82 -PSDL 85 (286)
T ss_pred -CCCH
Confidence 6533
No 239
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=97.57 E-value=0.00091 Score=56.50 Aligned_cols=74 Identities=19% Similarity=0.116 Sum_probs=48.5
Q ss_pred eeeeCCccccceEEEEeC-Cc-cEEEEecCCCC-----cchHHHHHHHHHHHHhcCCCCCccceeecccCC--CceEEEE
Q 022304 27 ICPVGGGCINLASRYGTD-AG-SFFVKTNRSIG-----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPT--GGSYIIM 97 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~~-~g-~~vlK~~~~~~-----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~--~~~~~v~ 97 (299)
.+.++.|....+|++... ++ .+++|...... ...+..|+..++.+.. ..+.+++..... . ...++++
T Consensus 5 ~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~---~~i~~~~~~~~~-~~~~~~~lv~ 80 (260)
T cd06606 5 GELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQH---PNIVRYYGSERD-EEKNTLNIFL 80 (260)
T ss_pred eeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCC---CCEeeEEEEEec-CCCCeEEEEE
Confidence 356777777899998875 33 78888876432 3456778877777752 233444444332 3 5789999
Q ss_pred ecccCCC
Q 022304 98 EFIEFGS 104 (299)
Q Consensus 98 e~l~G~~ 104 (299)
|+++|..
T Consensus 81 e~~~~~~ 87 (260)
T cd06606 81 EYVSGGS 87 (260)
T ss_pred EecCCCc
Confidence 9998863
No 240
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=97.56 E-value=0.00072 Score=57.85 Aligned_cols=74 Identities=14% Similarity=0.034 Sum_probs=47.5
Q ss_pred eeeCCccccceEEEEeC--CccEEEEecCCCCc------------chHHHHHHHHHHHHhcCCCCCccceeecccCCCce
Q 022304 28 CPVGGGCINLASRYGTD--AGSFFVKTNRSIGP------------SMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGS 93 (299)
Q Consensus 28 ~~~~~G~~n~~y~v~~~--~g~~vlK~~~~~~~------------~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~ 93 (299)
..++.|..+.+|++... +..+++|....... ..++.|..+++.+.. -.+++++..... .+..
T Consensus 6 ~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~ 81 (267)
T cd06628 6 ALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQH---ENIVQYLGSSLD-ADHL 81 (267)
T ss_pred ceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCC---CCeeeEEEEEEe-CCcc
Confidence 35667778899998763 23788886643210 235667777777743 234555554333 5688
Q ss_pred EEEEecccCCCC
Q 022304 94 YIIMEFIEFGSS 105 (299)
Q Consensus 94 ~~v~e~l~G~~~ 105 (299)
++++|+++|..+
T Consensus 82 ~lv~e~~~~~~L 93 (267)
T cd06628 82 NIFLEYVPGGSV 93 (267)
T ss_pred EEEEEecCCCCH
Confidence 999999988643
No 241
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=97.56 E-value=0.00066 Score=59.03 Aligned_cols=79 Identities=16% Similarity=0.161 Sum_probs=49.9
Q ss_pred eeeeeeeCCccccceEEEEeCC-------ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCccceeecccCCCc
Q 022304 24 ITKICPVGGGCINLASRYGTDA-------GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGG 92 (299)
Q Consensus 24 ~~~~~~~~~G~~n~~y~v~~~~-------g~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~ 92 (299)
..-.+.++.|..+.+|+....+ ..+.+|...... ...+..|..++..+..+ ..+.+.+..... .+.
T Consensus 14 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h--~~i~~~~~~~~~-~~~ 90 (293)
T cd05053 14 LTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH--KNIINLLGVCTQ-EGP 90 (293)
T ss_pred eEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCC--CCeeeEEEEEcC-CCC
Confidence 3445778888888999987531 257888876421 12355688777777443 123334443322 567
Q ss_pred eEEEEecccCCCC
Q 022304 93 SYIIMEFIEFGSS 105 (299)
Q Consensus 93 ~~~v~e~l~G~~~ 105 (299)
.+++|||+++.++
T Consensus 91 ~~li~e~~~~~~L 103 (293)
T cd05053 91 LYVVVEYAAHGNL 103 (293)
T ss_pred eEEEEEeCCCCcH
Confidence 8999999998743
No 242
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=97.56 E-value=0.00091 Score=61.38 Aligned_cols=76 Identities=14% Similarity=0.097 Sum_probs=52.0
Q ss_pred eeeeCCccccceEEEEeC---C----ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEE
Q 022304 27 ICPVGGGCINLASRYGTD---A----GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI 95 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~~---~----g~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~ 95 (299)
.+.+|.|..+.||+.+.. . ..+.+|...... ...+..|+.++..|..+ -.+++++..... .+..++
T Consensus 42 ~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~H--pnIv~l~~~~~~-~~~~~l 118 (400)
T cd05105 42 GRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPH--LNIVNLLGACTK-SGPIYI 118 (400)
T ss_pred hheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCC--CCeeeEEEEEcc-CCceEE
Confidence 467888888899987631 1 157888775421 23466788888888644 245666655433 568899
Q ss_pred EEecccCCCC
Q 022304 96 IMEFIEFGSS 105 (299)
Q Consensus 96 v~e~l~G~~~ 105 (299)
+|||++|.++
T Consensus 119 v~Ey~~~g~L 128 (400)
T cd05105 119 ITEYCFYGDL 128 (400)
T ss_pred EEEecCCCcH
Confidence 9999999865
No 243
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=97.55 E-value=0.0015 Score=56.86 Aligned_cols=74 Identities=19% Similarity=0.231 Sum_probs=47.7
Q ss_pred eeeeCCccccceEEEEeC-Cc-cEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCCccceeecccC----CCceEE
Q 022304 27 ICPVGGGCINLASRYGTD-AG-SFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP----TGGSYI 95 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~~-~g-~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~----~~~~~~ 95 (299)
...++.|..+.+|++... ++ .+++|..... ....+..|..+++.+..+ -.+++++...... ....|+
T Consensus 6 ~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~--~~i~~~~~~~~~~~~~~~~~~~l 83 (295)
T cd07837 6 LEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSES--IYIVRLLDVEHVEEKNGKPSLYL 83 (295)
T ss_pred eeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCC--CCccceeeeEeecCCCCCceEEE
Confidence 456788888899998864 33 7888976532 123456788888888653 2344555433221 123799
Q ss_pred EEecccC
Q 022304 96 IMEFIEF 102 (299)
Q Consensus 96 v~e~l~G 102 (299)
+|+|++|
T Consensus 84 v~e~~~~ 90 (295)
T cd07837 84 VFEYLDS 90 (295)
T ss_pred EeeccCc
Confidence 9999976
No 244
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=97.55 E-value=0.00061 Score=58.20 Aligned_cols=72 Identities=14% Similarity=0.050 Sum_probs=45.8
Q ss_pred eCCccccceEEEEeC--CccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEeccc
Q 022304 30 VGGGCINLASRYGTD--AGSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE 101 (299)
Q Consensus 30 ~~~G~~n~~y~v~~~--~g~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~ 101 (299)
++.|..+.+|++... +..+++|..... ....+..|...++.+.. -.+++++..... ....+++++|.+
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~lv~e~~~ 76 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNH---PFIVKLYRTFKD-KKYIYMLMEYCL 76 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCC---CCEeeeeeeEEc-CCccEEEEecCC
Confidence 356667789998875 448889987531 12346677777776642 234444443222 457899999998
Q ss_pred CCCC
Q 022304 102 FGSS 105 (299)
Q Consensus 102 G~~~ 105 (299)
|..+
T Consensus 77 ~~~L 80 (262)
T cd05572 77 GGEL 80 (262)
T ss_pred CCcH
Confidence 8643
No 245
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=97.54 E-value=0.0013 Score=57.13 Aligned_cols=76 Identities=13% Similarity=0.067 Sum_probs=48.3
Q ss_pred eeeeeCCccccceEEEEeC-Cc-cEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEE
Q 022304 26 KICPVGGGCINLASRYGTD-AG-SFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM 97 (299)
Q Consensus 26 ~~~~~~~G~~n~~y~v~~~-~g-~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~ 97 (299)
....++.|..+.+|++... ++ .+.+|..... ....+..|.++++.|... .++........ .+..+++|
T Consensus 4 ~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~---~i~~~~~~~~~-~~~~~lv~ 79 (285)
T cd05632 4 QYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQ---FVVNLAYAYET-KDALCLVL 79 (285)
T ss_pred EEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCc---CceeEEEEEec-CCEEEEEE
Confidence 4466888888999998764 33 6888876431 112345688888887542 23333333222 45789999
Q ss_pred ecccCCCC
Q 022304 98 EFIEFGSS 105 (299)
Q Consensus 98 e~l~G~~~ 105 (299)
++++|..+
T Consensus 80 e~~~~~~L 87 (285)
T cd05632 80 TIMNGGDL 87 (285)
T ss_pred EeccCccH
Confidence 99998644
No 246
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=97.54 E-value=0.0012 Score=56.49 Aligned_cols=27 Identities=26% Similarity=0.300 Sum_probs=24.2
Q ss_pred cceeccCCCCCCeeecCCCCeEEEccc
Q 022304 197 PCLLHGDLWSGNISSDKNGEPVILDPA 223 (299)
Q Consensus 197 ~~liHgDl~~~Nvl~~~~~~~~iID~~ 223 (299)
..++|+|+++.||+++.++...++|+.
T Consensus 133 ~~i~H~dl~~~nil~~~~~~~~l~dfg 159 (269)
T cd08528 133 KRIVHRDLTPNNIMLGEDDKVTITDFG 159 (269)
T ss_pred CceeecCCCHHHEEECCCCcEEEeccc
Confidence 479999999999999988878999975
No 247
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=97.54 E-value=0.00077 Score=56.96 Aligned_cols=72 Identities=11% Similarity=0.018 Sum_probs=45.8
Q ss_pred eCCccccceEEEEeC--CccEEEEecCCCC------cchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEeccc
Q 022304 30 VGGGCINLASRYGTD--AGSFFVKTNRSIG------PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE 101 (299)
Q Consensus 30 ~~~G~~n~~y~v~~~--~g~~vlK~~~~~~------~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~ 101 (299)
+|.|..+.+|++... +..+++|...... ...+..|...++.+.. ..+++++..... ....+++|++++
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~~v~e~~~ 76 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINH---PFIVKLHYAFQT-EEKLYLVLEYAP 76 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCC---CcHHHHHHHeec-CCeeEEEEecCC
Confidence 356777789998864 3378889876421 1245677777776652 234444443322 467899999998
Q ss_pred CCCC
Q 022304 102 FGSS 105 (299)
Q Consensus 102 G~~~ 105 (299)
|..+
T Consensus 77 ~~~L 80 (250)
T cd05123 77 GGEL 80 (250)
T ss_pred CCcH
Confidence 7643
No 248
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=97.54 E-value=0.0014 Score=56.24 Aligned_cols=73 Identities=15% Similarity=0.145 Sum_probs=44.0
Q ss_pred eeCCccccceEEEEeCCc----cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEecc
Q 022304 29 PVGGGCINLASRYGTDAG----SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI 100 (299)
Q Consensus 29 ~~~~G~~n~~y~v~~~~g----~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l 100 (299)
.++.|..+.||+.+..++ .+++|...... ...+..|+..++.+.. -.+.+++..... .+..+++||++
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h---~nii~~~~~~~~-~~~~~lv~e~~ 77 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNH---PNVLQCLGQCIE-SIPYLLVLEFC 77 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCC---CCcceEEEEECC-CCceEEEEEeC
Confidence 467788888998754322 67888654321 1234456666665532 234445544332 46789999999
Q ss_pred cCCCC
Q 022304 101 EFGSS 105 (299)
Q Consensus 101 ~G~~~ 105 (299)
+|..+
T Consensus 78 ~~g~L 82 (269)
T cd05042 78 PLGDL 82 (269)
T ss_pred CCCcH
Confidence 88643
No 249
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=97.54 E-value=0.0012 Score=56.48 Aligned_cols=76 Identities=24% Similarity=0.112 Sum_probs=47.8
Q ss_pred eeeeeCCccccceEEEEeCC-----ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEE
Q 022304 26 KICPVGGGCINLASRYGTDA-----GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII 96 (299)
Q Consensus 26 ~~~~~~~G~~n~~y~v~~~~-----g~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v 96 (299)
-.+.++.|..+.+|+..... ..+.+|...... ...+..|..+++.+.. -.+.+++..... .+..+++
T Consensus 8 ~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~iv 83 (266)
T cd05033 8 IEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDH---PNIIRLEGVVTK-SRPVMII 83 (266)
T ss_pred eeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCC---CCcceEeEEEec-CCceEEE
Confidence 45677888888999976531 267888765421 1234567777766642 234445443322 4678999
Q ss_pred EecccCCCC
Q 022304 97 MEFIEFGSS 105 (299)
Q Consensus 97 ~e~l~G~~~ 105 (299)
||+.+|..+
T Consensus 84 ~e~~~~~~L 92 (266)
T cd05033 84 TEYMENGSL 92 (266)
T ss_pred EEcCCCCCH
Confidence 999998744
No 250
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=97.54 E-value=0.00077 Score=57.18 Aligned_cols=75 Identities=13% Similarity=0.010 Sum_probs=50.2
Q ss_pred eeeeCCccccceEEEEeCC--ccEEEEecCCC-CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEecccCC
Q 022304 27 ICPVGGGCINLASRYGTDA--GSFFVKTNRSI-GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFG 103 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~~~--g~~vlK~~~~~-~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~ 103 (299)
.+.++.|....+|++...+ ..+++|..... ....+..|.+.++.+.. ..+++++..... ....++++++++|.
T Consensus 8 ~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~e~~~~~~l~~---~~i~~~~~~~~~-~~~~~l~~e~~~~~ 83 (256)
T cd06612 8 LEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEEDLQEIIKEISILKQCDS---PYIVKYYGSYFK-NTDLWIVMEYCGAG 83 (256)
T ss_pred hhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHHHHHHHHHHHHHHhCCC---CcEeeeeeeeec-CCcEEEEEecCCCC
Confidence 3457777778899988754 37888987642 23457788888877732 234445544332 46789999999987
Q ss_pred CC
Q 022304 104 SS 105 (299)
Q Consensus 104 ~~ 105 (299)
.+
T Consensus 84 ~L 85 (256)
T cd06612 84 SV 85 (256)
T ss_pred cH
Confidence 44
No 251
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=97.54 E-value=0.0015 Score=56.12 Aligned_cols=78 Identities=17% Similarity=0.106 Sum_probs=47.4
Q ss_pred ceeeeeeeCCccccceEEEEeC-Cc-cEEEEecCCCCcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEecc
Q 022304 23 HITKICPVGGGCINLASRYGTD-AG-SFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI 100 (299)
Q Consensus 23 ~~~~~~~~~~G~~n~~y~v~~~-~g-~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l 100 (299)
.+.....++.|..+.+|++... .+ .|++|........ ..|......+..+ -.+++++..... .+..+++|||+
T Consensus 17 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~--~~e~~~~~~~~~h--~~iv~~~~~~~~-~~~~~iv~e~~ 91 (267)
T PHA03390 17 EIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFN--AIEPMVHQLMKDN--PNFIKLYYSVTT-LKGHVLIMDYI 91 (267)
T ss_pred ccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcc--hhhHHHHHHhhcC--CCEEEEEEEEec-CCeeEEEEEcC
Confidence 4444445788988999998864 23 7888887642211 1233333333333 345555544333 46889999999
Q ss_pred cCCCC
Q 022304 101 EFGSS 105 (299)
Q Consensus 101 ~G~~~ 105 (299)
+|.++
T Consensus 92 ~~~~L 96 (267)
T PHA03390 92 KDGDL 96 (267)
T ss_pred CCCcH
Confidence 98643
No 252
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=97.54 E-value=0.00084 Score=57.24 Aligned_cols=75 Identities=13% Similarity=0.123 Sum_probs=43.6
Q ss_pred eeeCCccccceEEEEeC--CccEEEEecCCCC---cc---hHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEec
Q 022304 28 CPVGGGCINLASRYGTD--AGSFFVKTNRSIG---PS---MFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 99 (299)
Q Consensus 28 ~~~~~G~~n~~y~v~~~--~g~~vlK~~~~~~---~~---~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~ 99 (299)
++++.|..+.+|++... +..+++|..+... .. .+..|...+.....+ ..+++++..... ....++++||
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~--~~i~~~~~~~~~-~~~~~lv~e~ 78 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGES--PYVAKLYYSFQS-KDYLYLVMEY 78 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCC--CCeeeeeeeEEc-CCeEEEEEec
Confidence 46778888899998763 3378889875421 11 122233322222222 234555544332 4678999999
Q ss_pred ccCCCC
Q 022304 100 IEFGSS 105 (299)
Q Consensus 100 l~G~~~ 105 (299)
++|..+
T Consensus 79 ~~~~~L 84 (260)
T cd05611 79 LNGGDC 84 (260)
T ss_pred cCCCCH
Confidence 999754
No 253
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=97.53 E-value=0.00084 Score=58.33 Aligned_cols=74 Identities=14% Similarity=0.081 Sum_probs=49.3
Q ss_pred eeeeeeCCccccceEEEEeC-C-ccEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEe
Q 022304 25 TKICPVGGGCINLASRYGTD-A-GSFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 98 (299)
Q Consensus 25 ~~~~~~~~G~~n~~y~v~~~-~-g~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e 98 (299)
.-+..++.|..+.+|++... + ..|++|..... ....+..|..+++.+... .+.+++..... ....+++||
T Consensus 8 ~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~---~i~~~~~~~~~-~~~~~lv~e 83 (291)
T cd07844 8 KKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHA---NIVTLHDIIHT-KKTLTLVFE 83 (291)
T ss_pred eEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCc---ceeeEEEEEec-CCeEEEEEe
Confidence 34577888888899998864 3 37889976531 123345688888888532 34455544332 467899999
Q ss_pred cccC
Q 022304 99 FIEF 102 (299)
Q Consensus 99 ~l~G 102 (299)
|++|
T Consensus 84 ~~~~ 87 (291)
T cd07844 84 YLDT 87 (291)
T ss_pred cCCC
Confidence 9975
No 254
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=97.53 E-value=0.0016 Score=55.49 Aligned_cols=75 Identities=11% Similarity=0.066 Sum_probs=48.8
Q ss_pred eeeeCCccccceEEEEeC-Cc-cEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEecc
Q 022304 27 ICPVGGGCINLASRYGTD-AG-SFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI 100 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~~-~g-~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l 100 (299)
.+.++.|..+.+|++... ++ .+++|..... ....+..|+..++.+.. ..+++++..... ....+++++++
T Consensus 6 ~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~---~~i~~~~~~~~~-~~~~~iv~e~~ 81 (267)
T cd06610 6 IEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNH---PNVVKYYTSFVV-GDELWLVMPYL 81 (267)
T ss_pred eeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCC---CCEEEEEEEEee-CCEEEEEEecc
Confidence 456777888899998863 33 7888887532 12446778877776643 234444433222 46789999999
Q ss_pred cCCCC
Q 022304 101 EFGSS 105 (299)
Q Consensus 101 ~G~~~ 105 (299)
+|..+
T Consensus 82 ~~~~l 86 (267)
T cd06610 82 SGGSL 86 (267)
T ss_pred CCCcH
Confidence 98743
No 255
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=97.53 E-value=0.0014 Score=56.73 Aligned_cols=77 Identities=25% Similarity=0.228 Sum_probs=47.9
Q ss_pred eeeeeCCccccceEEEEe-----CC-ccEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCCccceeecccC-CCceE
Q 022304 26 KICPVGGGCINLASRYGT-----DA-GSFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP-TGGSY 94 (299)
Q Consensus 26 ~~~~~~~G~~n~~y~v~~-----~~-g~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~-~~~~~ 94 (299)
.++.++.|..+.||++.. .+ ..+.+|..... ....+..|+++++.+.. -.+++++...... ....+
T Consensus 8 ~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h---~~i~~~~~~~~~~~~~~~~ 84 (283)
T cd05080 8 KIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYH---ENIVKYKGCCSEQGGKGLQ 84 (283)
T ss_pred eceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCC---CCEeeEEEEEecCCCceEE
Confidence 456778888888877542 12 36888987642 12345678888877743 2344555443221 24578
Q ss_pred EEEecccCCCC
Q 022304 95 IIMEFIEFGSS 105 (299)
Q Consensus 95 ~v~e~l~G~~~ 105 (299)
++||+++|..+
T Consensus 85 lv~e~~~~~~l 95 (283)
T cd05080 85 LIMEYVPLGSL 95 (283)
T ss_pred EEecCCCCCCH
Confidence 99999988744
No 256
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=97.52 E-value=0.00052 Score=58.49 Aligned_cols=75 Identities=11% Similarity=0.018 Sum_probs=48.8
Q ss_pred eeeeCCccccceEEEEeC--CccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEe
Q 022304 27 ICPVGGGCINLASRYGTD--AGSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 98 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~~--~g~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e 98 (299)
...++.|..+.+|++... +..+++|..... ....+..|...++.+.. -.+++++..... ....+++++
T Consensus 5 ~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~lv~e 80 (258)
T cd05578 5 LRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNH---PFLVNLWYSFQD-EENMYLVVD 80 (258)
T ss_pred EEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCC---CChHHHHHhhcC-CCeEEEEEe
Confidence 457788888899999875 337888977531 12345667777776643 123444433222 457899999
Q ss_pred cccCCCC
Q 022304 99 FIEFGSS 105 (299)
Q Consensus 99 ~l~G~~~ 105 (299)
+++|..+
T Consensus 81 ~~~~~~L 87 (258)
T cd05578 81 LLLGGDL 87 (258)
T ss_pred CCCCCCH
Confidence 9999744
No 257
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=97.52 E-value=0.00089 Score=57.87 Aligned_cols=72 Identities=19% Similarity=0.225 Sum_probs=47.6
Q ss_pred eeeeCCccccceEEEEeC-Cc-cEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEec
Q 022304 27 ICPVGGGCINLASRYGTD-AG-SFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 99 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~~-~g-~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~ 99 (299)
++.++.|..+.+|++... +| .+++|..... ....+..|.+.++.+.. -.+++++..... .+..++++++
T Consensus 4 ~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~---~~iv~~~~~~~~-~~~~~iv~e~ 79 (283)
T cd07835 4 VEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNH---PNIVRLLDVVHS-ENKLYLVFEF 79 (283)
T ss_pred heEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCC---CCccCHhheecc-CCeEEEEEec
Confidence 356788888899998753 34 7888977532 12345678888877753 245555554433 4688999999
Q ss_pred ccC
Q 022304 100 IEF 102 (299)
Q Consensus 100 l~G 102 (299)
+++
T Consensus 80 ~~~ 82 (283)
T cd07835 80 LDL 82 (283)
T ss_pred cCc
Confidence 854
No 258
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=97.51 E-value=0.00084 Score=57.17 Aligned_cols=75 Identities=15% Similarity=0.129 Sum_probs=49.2
Q ss_pred eeeeCCccccceEEEEeCC--ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEecc
Q 022304 27 ICPVGGGCINLASRYGTDA--GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI 100 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~~~--g~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l 100 (299)
.+.++.|..+.+|+++..+ ..+++|...... ...+..|...+..+.. ..+++++..... .+..+++++++
T Consensus 6 ~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~---~~i~~~~~~~~~-~~~~~lv~e~~ 81 (264)
T cd06623 6 VKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCES---PYVVKCYGAFYK-EGEISIVLEYM 81 (264)
T ss_pred eeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCC---CCeeeEEEEEcc-CCeEEEEEEec
Confidence 3567777778899987753 378889876432 2345667776766652 234555544332 46889999999
Q ss_pred cCCCC
Q 022304 101 EFGSS 105 (299)
Q Consensus 101 ~G~~~ 105 (299)
+|.++
T Consensus 82 ~~~~L 86 (264)
T cd06623 82 DGGSL 86 (264)
T ss_pred CCCcH
Confidence 98744
No 259
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=97.51 E-value=0.003 Score=53.57 Aligned_cols=75 Identities=21% Similarity=0.094 Sum_probs=44.7
Q ss_pred eeeCCccccceEEEEeCC--ccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEecc
Q 022304 28 CPVGGGCINLASRYGTDA--GSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI 100 (299)
Q Consensus 28 ~~~~~G~~n~~y~v~~~~--g~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l 100 (299)
+.++.|..+.+|++.... ..+++|..... ....+..|..+++.+.. ..+.+++.......+..+++|+++
T Consensus 6 ~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~---~~i~~~~~~~~~~~~~~~lv~e~~ 82 (257)
T cd08223 6 RVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKH---PNIVAYRESWEGEDGLLYIVMGFC 82 (257)
T ss_pred EEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCC---CCeeeeeeeecCCCCEEEEEeccc
Confidence 566778888999988643 37888876431 11235567666666642 123333322211134678999999
Q ss_pred cCCCC
Q 022304 101 EFGSS 105 (299)
Q Consensus 101 ~G~~~ 105 (299)
+|..+
T Consensus 83 ~~~~l 87 (257)
T cd08223 83 EGGDL 87 (257)
T ss_pred CCCcH
Confidence 98643
No 260
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=97.51 E-value=0.00071 Score=58.48 Aligned_cols=76 Identities=14% Similarity=0.139 Sum_probs=48.3
Q ss_pred eeeeeCCccccceEEEEeCC-------ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCccceeecccCCCceE
Q 022304 26 KICPVGGGCINLASRYGTDA-------GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSY 94 (299)
Q Consensus 26 ~~~~~~~G~~n~~y~v~~~~-------g~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~ 94 (299)
-.+.++.|....||++.... ..+.+|...... ...+..|...+..+.. ..+.+++..... .+..+
T Consensus 9 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h---~~i~~~~~~~~~-~~~~~ 84 (283)
T cd05048 9 FLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQH---PNIVCLLGVCTK-EQPTC 84 (283)
T ss_pred hhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCC---cccceEEEEEcC-CCceE
Confidence 35678888888999987522 257888765321 2345678777776643 234445544332 46789
Q ss_pred EEEecccCCCC
Q 022304 95 IIMEFIEFGSS 105 (299)
Q Consensus 95 ~v~e~l~G~~~ 105 (299)
+++||.+|.++
T Consensus 85 ~~~e~~~~~~L 95 (283)
T cd05048 85 MLFEYLAHGDL 95 (283)
T ss_pred EEEecCCCCcH
Confidence 99999988643
No 261
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=97.51 E-value=0.001 Score=57.06 Aligned_cols=75 Identities=19% Similarity=0.069 Sum_probs=47.1
Q ss_pred eeeeCCccccceEEEEeC--Cc---cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEE
Q 022304 27 ICPVGGGCINLASRYGTD--AG---SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM 97 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~~--~g---~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~ 97 (299)
.+.++.|..+.+|++... ++ .+.+|...... ...+..|..+++.+.. -.+++.+..... .+..+++|
T Consensus 9 ~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~lv~ 84 (267)
T cd05066 9 EKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDH---PNIIHLEGVVTK-SKPVMIVT 84 (267)
T ss_pred eeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCC---CCcceEEEEEec-CCccEEEE
Confidence 456788888899987642 22 57888765321 2345667777766642 234444444332 46789999
Q ss_pred ecccCCCC
Q 022304 98 EFIEFGSS 105 (299)
Q Consensus 98 e~l~G~~~ 105 (299)
|+++|..+
T Consensus 85 e~~~~~~L 92 (267)
T cd05066 85 EYMENGSL 92 (267)
T ss_pred EcCCCCCH
Confidence 99998744
No 262
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=97.50 E-value=0.00086 Score=58.00 Aligned_cols=74 Identities=14% Similarity=0.108 Sum_probs=49.7
Q ss_pred eeeeeCCccccceEEEEeCC--ccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEe
Q 022304 26 KICPVGGGCINLASRYGTDA--GSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 98 (299)
Q Consensus 26 ~~~~~~~G~~n~~y~v~~~~--g~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e 98 (299)
-++.++.|..+.+|++...+ ..+++|..... ....+..|.++++.+.. ..+++++..... .+..++++|
T Consensus 5 ~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~lv~e 80 (286)
T cd07846 5 NLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRH---ENLVNLIEVFRR-KKRLYLVFE 80 (286)
T ss_pred EeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCC---cchhhHHHhccc-CCeEEEEEe
Confidence 35678888888999988743 37888976431 12345678887777743 234555544332 567899999
Q ss_pred cccCC
Q 022304 99 FIEFG 103 (299)
Q Consensus 99 ~l~G~ 103 (299)
|++|.
T Consensus 81 ~~~~~ 85 (286)
T cd07846 81 FVDHT 85 (286)
T ss_pred cCCcc
Confidence 99875
No 263
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=97.50 E-value=0.0013 Score=56.35 Aligned_cols=75 Identities=24% Similarity=0.135 Sum_probs=47.9
Q ss_pred eeeeCCccccceEEEEeC-Cc----cEEEEecCCC-C---cchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEE
Q 022304 27 ICPVGGGCINLASRYGTD-AG----SFFVKTNRSI-G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM 97 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~~-~g----~~vlK~~~~~-~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~ 97 (299)
.+.++.|..+.+|+.... ++ .+.+|..... . ...+..|...++.+.. -.+.+++..... .+..+++|
T Consensus 9 ~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h---~ni~~~~~~~~~-~~~~~lv~ 84 (269)
T cd05065 9 EEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDH---PNIIHLEGVVTK-SRPVMIIT 84 (269)
T ss_pred EeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCC---cCcceEEEEECC-CCceEEEE
Confidence 356788888899998753 22 4889987642 1 2345667777776642 234445444322 46789999
Q ss_pred ecccCCCC
Q 022304 98 EFIEFGSS 105 (299)
Q Consensus 98 e~l~G~~~ 105 (299)
|+++|..+
T Consensus 85 e~~~~~~L 92 (269)
T cd05065 85 EFMENGAL 92 (269)
T ss_pred ecCCCCcH
Confidence 99988643
No 264
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=97.49 E-value=0.0013 Score=56.78 Aligned_cols=75 Identities=15% Similarity=-0.137 Sum_probs=47.7
Q ss_pred eeeeCCccccceEEEEeC--CccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEecc
Q 022304 27 ICPVGGGCINLASRYGTD--AGSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI 100 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~~--~g~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l 100 (299)
++.++.|..+.+|++... +..+++|...... ...+..|..++..+.. -.+.+++..... ....+++||++
T Consensus 6 ~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h---~~iv~~~~~~~~-~~~~~lv~e~~ 81 (279)
T cd06619 6 QEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDS---PYIIGFYGAFFV-ENRISICTEFM 81 (279)
T ss_pred eeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCC---CCeeeEEEEEEE-CCEEEEEEecC
Confidence 467888888899998753 3378888875321 1234567776666532 234444543332 46788999999
Q ss_pred cCCCC
Q 022304 101 EFGSS 105 (299)
Q Consensus 101 ~G~~~ 105 (299)
+|..+
T Consensus 82 ~~~~l 86 (279)
T cd06619 82 DGGSL 86 (279)
T ss_pred CCCCh
Confidence 98744
No 265
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=97.49 E-value=0.0015 Score=58.98 Aligned_cols=75 Identities=13% Similarity=0.125 Sum_probs=44.9
Q ss_pred eeeeeCCccccceEEEEeC--CccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCCccceeec---cc-C-CCce
Q 022304 26 KICPVGGGCINLASRYGTD--AGSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVG---AL-P-TGGS 93 (299)
Q Consensus 26 ~~~~~~~G~~n~~y~v~~~--~g~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~---~~-~-~~~~ 93 (299)
-++.+|.|..+.||++... +..+++|..... ....+..|..+++.+... .+.+++... .. . ....
T Consensus 28 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~---~ii~~~~~~~~~~~~~~~~~~ 104 (364)
T cd07875 28 NLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK---NIIGLLNVFTPQKSLEEFQDV 104 (364)
T ss_pred EEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCC---CccccceeecccccccccCeE
Confidence 3567888888899998753 337888876531 123345677777766432 222333221 11 0 2357
Q ss_pred EEEEecccCC
Q 022304 94 YIIMEFIEFG 103 (299)
Q Consensus 94 ~~v~e~l~G~ 103 (299)
+++||++++.
T Consensus 105 ~lv~e~~~~~ 114 (364)
T cd07875 105 YIVMELMDAN 114 (364)
T ss_pred EEEEeCCCCC
Confidence 9999999763
No 266
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=97.49 E-value=0.0025 Score=54.97 Aligned_cols=76 Identities=16% Similarity=0.077 Sum_probs=47.2
Q ss_pred eeeeeCCccccceEEEEeC-C-ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEec
Q 022304 26 KICPVGGGCINLASRYGTD-A-GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 99 (299)
Q Consensus 26 ~~~~~~~G~~n~~y~v~~~-~-g~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~ 99 (299)
.+..++.|..+.+|++... + ..+.+|+..... ...+..|...++.+.. ..+.+++..... ....++++||
T Consensus 8 ~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h---~~iv~~~~~~~~-~~~~~lv~e~ 83 (277)
T cd06641 8 KLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDS---PYVTKYYGSYLK-DTKLWIIMEY 83 (277)
T ss_pred hheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCC---CCEeEEEEEEEe-CCeEEEEEEe
Confidence 3456788888899998653 3 378889875321 1335566666666542 123344433322 4678999999
Q ss_pred ccCCCC
Q 022304 100 IEFGSS 105 (299)
Q Consensus 100 l~G~~~ 105 (299)
++|..+
T Consensus 84 ~~~~~l 89 (277)
T cd06641 84 LGGGSA 89 (277)
T ss_pred CCCCcH
Confidence 998643
No 267
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=97.48 E-value=0.0014 Score=55.75 Aligned_cols=76 Identities=16% Similarity=0.034 Sum_probs=48.5
Q ss_pred eeeeeCCccccceEEEEeCC--ccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEe
Q 022304 26 KICPVGGGCINLASRYGTDA--GSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 98 (299)
Q Consensus 26 ~~~~~~~G~~n~~y~v~~~~--g~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e 98 (299)
.++.++.|..+.+|.+...+ ..+++|..... ....+..|.++++.+.. -.+.+++..... .+..+++||
T Consensus 4 ~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h---~~i~~~~~~~~~-~~~~~~~~e 79 (256)
T cd08221 4 PIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQH---PNIIAYYNHFMD-DNTLLIEME 79 (256)
T ss_pred EeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCC---CCeeEEEeEEec-CCeEEEEEE
Confidence 35677888778778777643 37888865421 12345678888877743 234445544332 467899999
Q ss_pred cccCCCC
Q 022304 99 FIEFGSS 105 (299)
Q Consensus 99 ~l~G~~~ 105 (299)
+++|..+
T Consensus 80 ~~~~~~L 86 (256)
T cd08221 80 YANGGTL 86 (256)
T ss_pred ecCCCcH
Confidence 9998643
No 268
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=97.48 E-value=0.0017 Score=57.15 Aligned_cols=72 Identities=14% Similarity=0.111 Sum_probs=45.7
Q ss_pred eeeCCccccceEEEEeCC----ccEEEEecCCC-CcchHHHHHHHHHHHHhcCCCCCccceeeccc-CCCceEEEEeccc
Q 022304 28 CPVGGGCINLASRYGTDA----GSFFVKTNRSI-GPSMFEGEALGLGAMYETRTIRAPRPFKVGAL-PTGGSYIIMEFIE 101 (299)
Q Consensus 28 ~~~~~G~~n~~y~v~~~~----g~~vlK~~~~~-~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~-~~~~~~~v~e~l~ 101 (299)
..+|.|..+.||++...+ ..+.+|..... ....+.+|..+++.+... .+.+++..... .....++++++.+
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~~~~~~~E~~~l~~l~h~---niv~~~~~~~~~~~~~~~lv~e~~~ 83 (317)
T cd07867 7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGISMSACREIALLRELKHP---NVIALQKVFLSHSDRKVWLLFDYAE 83 (317)
T ss_pred eEeccCCCeeEEEEEecCCCccceEEEEEecCCCCcHHHHHHHHHHHhCCCC---CeeeEEEEEeccCCCeEEEEEeeeC
Confidence 368888889999998543 26888876542 223467788888877532 22333332211 1456789999987
Q ss_pred C
Q 022304 102 F 102 (299)
Q Consensus 102 G 102 (299)
+
T Consensus 84 ~ 84 (317)
T cd07867 84 H 84 (317)
T ss_pred C
Confidence 6
No 269
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=97.48 E-value=0.0013 Score=57.82 Aligned_cols=133 Identities=22% Similarity=0.235 Sum_probs=81.7
Q ss_pred eeeeeCCccccceEEEEeCC-c-cEEEEecCCCC---cchHHHHHHHHHHHHhcCCCCCccceeecc---cCCC-ceEEE
Q 022304 26 KICPVGGGCINLASRYGTDA-G-SFFVKTNRSIG---PSMFEGEALGLGAMYETRTIRAPRPFKVGA---LPTG-GSYII 96 (299)
Q Consensus 26 ~~~~~~~G~~n~~y~v~~~~-g-~~vlK~~~~~~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~---~~~~-~~~~v 96 (299)
..+-+|.|....||.....+ | .+.+|...... ...+++|..+|..|. .|+++.+.- ..++ ...++
T Consensus 21 ~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~------~p~IV~~~G~~~~~~~~~~~i~ 94 (313)
T KOG0198|consen 21 KGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLN------HPNIVQYYGSSSSRENDEYNIF 94 (313)
T ss_pred hhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCC------CCCEEeeCCccccccCeeeEee
Confidence 34567888888999998764 4 66777765321 234788998887775 366665422 2133 68899
Q ss_pred EecccCCCCCCcHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCCCCHHHHHHHhhhHHHHHHHHhhcCChHHH
Q 022304 97 MEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIY 176 (299)
Q Consensus 97 ~e~l~G~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (299)
|||++|+. +++.+.+. | |.+| ++ .+.
T Consensus 95 mEy~~~Gs-------L~~~~~~~----------g-------~~l~------E~--------~v~---------------- 120 (313)
T KOG0198|consen 95 MEYAPGGS-------LSDLIKRY----------G-------GKLP------EP--------LVR---------------- 120 (313)
T ss_pred eeccCCCc-------HHHHHHHc----------C-------CCCC------HH--------HHH----------------
Confidence 99999983 33444331 1 0010 00 011
Q ss_pred HHHHHHHHHHhccccCCCCCcceeccCCCCCCeeecC-CCCeEEEccc
Q 022304 177 QRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDK-NGEPVILDPA 223 (299)
Q Consensus 177 ~~~~~~~~~l~~~l~~~~~~~~liHgDl~~~Nvl~~~-~~~~~iID~~ 223 (299)
.....+++.+..+. ..+++|+|+++.|||+++ ++...|-||.
T Consensus 121 ~ytr~iL~GL~ylH-----s~g~vH~DiK~~NiLl~~~~~~~KlaDFG 163 (313)
T KOG0198|consen 121 RYTRQILEGLAYLH-----SKGIVHCDIKPANILLDPSNGDVKLADFG 163 (313)
T ss_pred HHHHHHHHHHHHHH-----hCCEeccCcccceEEEeCCCCeEEeccCc
Confidence 11223344444333 368999999999999998 5667787864
No 270
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=97.48 E-value=0.002 Score=56.05 Aligned_cols=74 Identities=15% Similarity=0.113 Sum_probs=44.8
Q ss_pred eeeCCccccceEEEEeCC-------ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEE
Q 022304 28 CPVGGGCINLASRYGTDA-------GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII 96 (299)
Q Consensus 28 ~~~~~G~~n~~y~v~~~~-------g~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v 96 (299)
+.++.|..+.+|+..... ..+.+|...... ...+..|...++.+.. -.+.+++..... .+..+++
T Consensus 6 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h---~~iv~~~~~~~~-~~~~~lv 81 (290)
T cd05045 6 KTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNH---PHVIKLYGACSQ-DGPLLLI 81 (290)
T ss_pred ccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCC---CCEeeEEEEEec-CCCcEEE
Confidence 456777778899976421 246677665321 1235667777776642 123344443322 5678999
Q ss_pred EecccCCCC
Q 022304 97 MEFIEFGSS 105 (299)
Q Consensus 97 ~e~l~G~~~ 105 (299)
++|.+|..+
T Consensus 82 ~e~~~~~~L 90 (290)
T cd05045 82 VEYAKYGSL 90 (290)
T ss_pred EEecCCCCH
Confidence 999998744
No 271
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=97.48 E-value=0.0007 Score=59.37 Aligned_cols=77 Identities=17% Similarity=0.140 Sum_probs=50.6
Q ss_pred eeeeeCCccccceEEEEeC--------Cc-cEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCc
Q 022304 26 KICPVGGGCINLASRYGTD--------AG-SFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGG 92 (299)
Q Consensus 26 ~~~~~~~G~~n~~y~v~~~--------~g-~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~ 92 (299)
-.++++.|..+.||++... ++ .+++|..... ....+..|...++.+..+ -.+.+++..... .+.
T Consensus 19 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h--~~i~~~~~~~~~-~~~ 95 (304)
T cd05101 19 LGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH--KNIINLLGACTQ-DGP 95 (304)
T ss_pred ecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccC--CCchheeEEEec-CCc
Confidence 3477888888999988631 11 5788877532 123467888888888554 234455554332 467
Q ss_pred eEEEEecccCCCC
Q 022304 93 SYIIMEFIEFGSS 105 (299)
Q Consensus 93 ~~~v~e~l~G~~~ 105 (299)
.+++|+|+++..+
T Consensus 96 ~~lv~e~~~~~~L 108 (304)
T cd05101 96 LYVIVEYASKGNL 108 (304)
T ss_pred eEEEEecCCCCcH
Confidence 8999999998743
No 272
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=97.47 E-value=0.0011 Score=61.80 Aligned_cols=132 Identities=19% Similarity=0.136 Sum_probs=85.0
Q ss_pred eeeCCccccceEEEEe-CCc-cEEEEecCC------CCcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEec
Q 022304 28 CPVGGGCINLASRYGT-DAG-SFFVKTNRS------IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 99 (299)
Q Consensus 28 ~~~~~G~~n~~y~v~~-~~g-~~vlK~~~~------~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~ 99 (299)
.-+|.|....+|+++. +.| .|.+|+-+. ..+..+..|+++.+.|+.. .+-+.+.+-++ ....|+++|.
T Consensus 24 ~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~Hp---nIV~f~~~FED-s~nVYivLEL 99 (592)
T KOG0575|consen 24 RFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHP---NIVQFYHFFED-SNNVYIVLEL 99 (592)
T ss_pred eeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCC---cEEeeeeEeec-CCceEEEEEe
Confidence 3468888899999998 555 788887764 3467788999999888641 23344433222 5688999999
Q ss_pred ccCCCCCCcHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCCCCHHHHHHHhhhHHHHHHHHhhcCChHHHHHH
Q 022304 100 IEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRG 179 (299)
Q Consensus 100 l~G~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (299)
++-+ .|..+|+...+ +. +. +.+-.+
T Consensus 100 C~~~-----------sL~el~Krrk~---lt-----------------Ep------------------------Eary~l 124 (592)
T KOG0575|consen 100 CHRG-----------SLMELLKRRKP---LT-----------------EP------------------------EARYFL 124 (592)
T ss_pred cCCc-----------cHHHHHHhcCC---CC-----------------cH------------------------HHHHHH
Confidence 8765 24455553321 00 00 001123
Q ss_pred HHHHHHHhccccCCCCCcceeccCCCCCCeeecCCCCeEEEccc
Q 022304 180 HRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA 223 (299)
Q Consensus 180 ~~~~~~l~~~l~~~~~~~~liHgDl~~~Nvl~~~~~~~~iID~~ 223 (299)
.+++..+..+. ..++||+|++.||++++++-++-|-||.
T Consensus 125 ~QIv~GlkYLH-----~~~IiHRDLKLGNlfL~~~~~VKIgDFG 163 (592)
T KOG0575|consen 125 RQIVEGLKYLH-----SLGIIHRDLKLGNLFLNENMNVKIGDFG 163 (592)
T ss_pred HHHHHHHHHHH-----hcCceecccchhheeecCcCcEEecccc
Confidence 34455555433 2469999999999999877667788874
No 273
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=97.47 E-value=0.00098 Score=57.63 Aligned_cols=72 Identities=15% Similarity=0.081 Sum_probs=46.0
Q ss_pred eeeeCCccccceEEEEeC-Cc-cEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEec
Q 022304 27 ICPVGGGCINLASRYGTD-AG-SFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 99 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~~-~g-~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~ 99 (299)
++.++.|..+.+|++... .| .+++|..... ....+..|++.++.+... .+.+++..... .+..++++|+
T Consensus 5 ~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~---~i~~~~~~~~~-~~~~~lv~e~ 80 (284)
T cd07839 5 LEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHK---NIVRLYDVLHS-DKKLTLVFEY 80 (284)
T ss_pred EEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCC---CeeeHHHHhcc-CCceEEEEec
Confidence 456788888899998863 34 6788876421 123456788888777431 23334433222 4678999999
Q ss_pred ccC
Q 022304 100 IEF 102 (299)
Q Consensus 100 l~G 102 (299)
++|
T Consensus 81 ~~~ 83 (284)
T cd07839 81 CDQ 83 (284)
T ss_pred CCC
Confidence 875
No 274
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=97.47 E-value=0.0017 Score=56.06 Aligned_cols=73 Identities=14% Similarity=0.089 Sum_probs=50.3
Q ss_pred eeeeeCCccccceEEEEeC-Cc-cEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEec
Q 022304 26 KICPVGGGCINLASRYGTD-AG-SFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 99 (299)
Q Consensus 26 ~~~~~~~G~~n~~y~v~~~-~g-~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~ 99 (299)
.++.++.|..+.+|+.+.. +| .+++|..... ....+..|+.+++.+.. -.+++++..... .+..+++||+
T Consensus 4 ~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h---~~i~~~~~~~~~-~~~~~lv~e~ 79 (284)
T cd07836 4 QLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKH---ENIVRLHDVIHT-ENKLMLVFEY 79 (284)
T ss_pred EeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcC---CCEeeeeeeEee-CCcEEEEEec
Confidence 4567888888899998864 34 7888876532 12345678888888853 245666655433 4678999999
Q ss_pred ccC
Q 022304 100 IEF 102 (299)
Q Consensus 100 l~G 102 (299)
++|
T Consensus 80 ~~~ 82 (284)
T cd07836 80 MDK 82 (284)
T ss_pred CCc
Confidence 986
No 275
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=97.47 E-value=0.0014 Score=54.07 Aligned_cols=73 Identities=18% Similarity=0.105 Sum_probs=51.3
Q ss_pred eeeCCccccceEEEEeCC--ccEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEeccc
Q 022304 28 CPVGGGCINLASRYGTDA--GSFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE 101 (299)
Q Consensus 28 ~~~~~G~~n~~y~v~~~~--g~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~ 101 (299)
+.++.|....+|++...+ ..+++|..... ....+..|.+.++.+.. ..+++++..... ....++++++.+
T Consensus 5 ~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~---~~i~~~~~~~~~-~~~~~~v~e~~~ 80 (225)
T smart00221 5 KKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKH---PNIVKLYGVFED-PEPLYLVMEYCE 80 (225)
T ss_pred eEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCC---CChhhheeeeec-CCceEEEEeccC
Confidence 567777788999998865 48999998753 23456778887777732 345556654432 467899999998
Q ss_pred CCC
Q 022304 102 FGS 104 (299)
Q Consensus 102 G~~ 104 (299)
|.+
T Consensus 81 ~~~ 83 (225)
T smart00221 81 GGD 83 (225)
T ss_pred CCC
Confidence 863
No 276
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=97.47 E-value=0.0018 Score=57.08 Aligned_cols=72 Identities=14% Similarity=0.107 Sum_probs=46.0
Q ss_pred eeeCCccccceEEEEeCC----ccEEEEecCCC-CcchHHHHHHHHHHHHhcCCCCCccceeecccC-CCceEEEEeccc
Q 022304 28 CPVGGGCINLASRYGTDA----GSFFVKTNRSI-GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP-TGGSYIIMEFIE 101 (299)
Q Consensus 28 ~~~~~G~~n~~y~v~~~~----g~~vlK~~~~~-~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~-~~~~~~v~e~l~ 101 (299)
..+|.|..+.||++...+ ..+.+|..... ....+.+|+.+++.+... .+.+++...... ....++++++.+
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~E~~~l~~l~h~---niv~~~~~~~~~~~~~~~lv~e~~~ 83 (317)
T cd07868 7 CKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGISMSACREIALLRELKHP---NVISLQKVFLSHADRKVWLLFDYAE 83 (317)
T ss_pred cccccCCCeEEEEEEEccCCCCceEEEEEECCCCCcHHHHHHHHHHHhcCCC---CCcceeeeEecCCCcEEEEEEeccC
Confidence 468888889999997532 26888877542 233467899988888542 233333322111 346789999987
Q ss_pred C
Q 022304 102 F 102 (299)
Q Consensus 102 G 102 (299)
+
T Consensus 84 ~ 84 (317)
T cd07868 84 H 84 (317)
T ss_pred C
Confidence 6
No 277
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=97.46 E-value=0.0013 Score=55.85 Aligned_cols=75 Identities=17% Similarity=0.153 Sum_probs=48.0
Q ss_pred eeeeCCccccceEEEEeCC--ccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEec
Q 022304 27 ICPVGGGCINLASRYGTDA--GSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 99 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~~~--g~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~ 99 (299)
+..++.|..+.+|++.... ..|++|..... ....+..|...++.+.. ..+++++..... .+..++++|+
T Consensus 5 ~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~---~~i~~~~~~~~~-~~~~~lv~e~ 80 (256)
T cd08218 5 VKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKH---PNIVQYQESFEE-NGNLYIVMDY 80 (256)
T ss_pred EEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCC---CCeeeeEeeecC-CCeEEEEEec
Confidence 5678888888899987642 37888865421 12345667777766643 124444443322 5688999999
Q ss_pred ccCCCC
Q 022304 100 IEFGSS 105 (299)
Q Consensus 100 l~G~~~ 105 (299)
++|..+
T Consensus 81 ~~~~~l 86 (256)
T cd08218 81 CEGGDL 86 (256)
T ss_pred CCCCcH
Confidence 998643
No 278
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=97.46 E-value=0.0029 Score=54.36 Aligned_cols=78 Identities=17% Similarity=0.196 Sum_probs=51.6
Q ss_pred eeeeeeeCCccccceEEEEeC-------CccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCccceeecccCCCc
Q 022304 24 ITKICPVGGGCINLASRYGTD-------AGSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGG 92 (299)
Q Consensus 24 ~~~~~~~~~G~~n~~y~v~~~-------~g~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~ 92 (299)
..-++.+|.|..+.+|++... ...+.+|...... ...+..|.++++.+.. ..+++++..... .+.
T Consensus 7 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h---~~iv~~~~~~~~-~~~ 82 (275)
T cd05046 7 LQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSH---KNVVRLLGLCRE-AEP 82 (275)
T ss_pred ceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCC---cceeeeEEEECC-CCc
Confidence 344667888888999998752 2257888776422 1346778888888853 234455554332 467
Q ss_pred eEEEEecccCCCC
Q 022304 93 SYIIMEFIEFGSS 105 (299)
Q Consensus 93 ~~~v~e~l~G~~~ 105 (299)
.+++||+++|..+
T Consensus 83 ~~lv~e~~~~~~L 95 (275)
T cd05046 83 HYMILEYTDLGDL 95 (275)
T ss_pred ceEEEEecCCCcH
Confidence 8999999988643
No 279
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=97.46 E-value=0.00062 Score=58.56 Aligned_cols=74 Identities=16% Similarity=0.174 Sum_probs=47.0
Q ss_pred eeCCccccceEEEEeCC-c---cEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEecc
Q 022304 29 PVGGGCINLASRYGTDA-G---SFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI 100 (299)
Q Consensus 29 ~~~~G~~n~~y~v~~~~-g---~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l 100 (299)
.++.|..+.+|++...+ + .+.+|..... ....+..|...+..+..+ -.+.+++..... .+..+++||+.
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h--~~iv~~~~~~~~-~~~~~lv~e~~ 78 (270)
T cd05047 2 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHH--PNIINLLGACEH-RGYLYLAIEYA 78 (270)
T ss_pred cCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccC--CCeeeEEEEEec-CCCceEEEEeC
Confidence 35677778999987643 2 3466665431 123466788888888654 234455554433 46789999999
Q ss_pred cCCCC
Q 022304 101 EFGSS 105 (299)
Q Consensus 101 ~G~~~ 105 (299)
++.++
T Consensus 79 ~~~~L 83 (270)
T cd05047 79 PHGNL 83 (270)
T ss_pred CCCcH
Confidence 98743
No 280
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=97.46 E-value=0.0024 Score=55.37 Aligned_cols=76 Identities=14% Similarity=0.171 Sum_probs=49.6
Q ss_pred eeeeeCCccccceEEEEeC-------CccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCccceeecccCCCceE
Q 022304 26 KICPVGGGCINLASRYGTD-------AGSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSY 94 (299)
Q Consensus 26 ~~~~~~~G~~n~~y~v~~~-------~g~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~ 94 (299)
-+..++.|..+.+|++... .+.+.+|...... ...+..|+..++.+.. ..+.+++..... ....+
T Consensus 9 ~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h---~~iv~~~~~~~~-~~~~~ 84 (288)
T cd05050 9 YVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDH---PNIVKLLGVCAV-GKPMC 84 (288)
T ss_pred ecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCC---CchheEEEEEcC-CCccE
Confidence 3467788888899998742 3478888876422 2345667777777742 234555554432 45789
Q ss_pred EEEecccCCCC
Q 022304 95 IIMEFIEFGSS 105 (299)
Q Consensus 95 ~v~e~l~G~~~ 105 (299)
+++|+.+|..+
T Consensus 85 lv~e~~~~~~L 95 (288)
T cd05050 85 LLFEYMAYGDL 95 (288)
T ss_pred EEEecCCCCCH
Confidence 99999998643
No 281
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=97.46 E-value=0.00092 Score=58.73 Aligned_cols=76 Identities=18% Similarity=0.146 Sum_probs=50.1
Q ss_pred eeeeCCccccceEEEEeCC---------ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCccceeecccCCCce
Q 022304 27 ICPVGGGCINLASRYGTDA---------GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGS 93 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~~~---------g~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~ 93 (299)
.+.+|.|..+.||++...+ ..+++|+..... ...+..|...+..+..+ -.+++++..... .+..
T Consensus 23 ~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h--~~i~~~~~~~~~-~~~~ 99 (307)
T cd05098 23 GKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH--KNIINLLGACTQ-DGPL 99 (307)
T ss_pred eeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCC--CCEeeEEEEEec-CCce
Confidence 4678888888999986421 158888886421 12355688878777544 234555554333 4678
Q ss_pred EEEEecccCCCC
Q 022304 94 YIIMEFIEFGSS 105 (299)
Q Consensus 94 ~~v~e~l~G~~~ 105 (299)
+++||++++..+
T Consensus 100 ~lv~e~~~~~~L 111 (307)
T cd05098 100 YVIVEYASKGNL 111 (307)
T ss_pred EEEEecCCCCcH
Confidence 999999988643
No 282
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=97.45 E-value=0.0016 Score=55.45 Aligned_cols=74 Identities=19% Similarity=0.132 Sum_probs=49.5
Q ss_pred eeeCCccccceEEEEeC--CccEEEEecCCCC-----cchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEecc
Q 022304 28 CPVGGGCINLASRYGTD--AGSFFVKTNRSIG-----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI 100 (299)
Q Consensus 28 ~~~~~G~~n~~y~v~~~--~g~~vlK~~~~~~-----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l 100 (299)
+.++.|..+.+|++... +..+++|...... ...+..|...++.+.. ..+.+++..... ....++++||+
T Consensus 6 ~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~---~~i~~~~~~~~~-~~~~~lv~e~~ 81 (264)
T cd06626 6 NKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKH---PNLVKYYGVEVH-REKVYIFMEYC 81 (264)
T ss_pred eEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCC---CChhheeeeEec-CCEEEEEEecC
Confidence 57788888899998763 3378888875321 2345677777777743 234455544332 46789999999
Q ss_pred cCCCC
Q 022304 101 EFGSS 105 (299)
Q Consensus 101 ~G~~~ 105 (299)
+|..+
T Consensus 82 ~~~~L 86 (264)
T cd06626 82 SGGTL 86 (264)
T ss_pred CCCcH
Confidence 98744
No 283
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=97.45 E-value=0.0026 Score=54.90 Aligned_cols=76 Identities=14% Similarity=0.062 Sum_probs=46.7
Q ss_pred eeeeCCccccceEEEEeCC--ccEEEEecCCC-C----cchHHHHHHHHHHHHhcCCCCCccceeecccCC----CceEE
Q 022304 27 ICPVGGGCINLASRYGTDA--GSFFVKTNRSI-G----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPT----GGSYI 95 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~~~--g~~vlK~~~~~-~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~----~~~~~ 95 (299)
+..++.|..+.+|++.... ..|++|..... . ...+..|...++.+.....-.+.+++....... ...++
T Consensus 4 ~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~~l 83 (287)
T cd07838 4 LAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELKLTL 83 (287)
T ss_pred EEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCceeEE
Confidence 3567777778999998753 38999988631 1 123556777888886421123445554432211 13789
Q ss_pred EEecccC
Q 022304 96 IMEFIEF 102 (299)
Q Consensus 96 v~e~l~G 102 (299)
+|+++.+
T Consensus 84 ~~e~~~~ 90 (287)
T cd07838 84 VFEHVDQ 90 (287)
T ss_pred Eehhccc
Confidence 9998875
No 284
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=97.45 E-value=0.0045 Score=54.12 Aligned_cols=78 Identities=13% Similarity=0.102 Sum_probs=50.5
Q ss_pred eeeeeeeCCccccceEEEEe-C-CccEEEEecCCC---CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEe
Q 022304 24 ITKICPVGGGCINLASRYGT-D-AGSFFVKTNRSI---GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 98 (299)
Q Consensus 24 ~~~~~~~~~G~~n~~y~v~~-~-~g~~vlK~~~~~---~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e 98 (299)
..-++.++.|..+.+|++.. . +..+++|..... ....+..|...++.+... .+++++..... ....+++++
T Consensus 21 y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~---~iv~~~~~~~~-~~~~~lv~e 96 (296)
T cd06655 21 YTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNP---NIVNFLDSFLV-GDELFVVME 96 (296)
T ss_pred EEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCC---ceeeeeeeEec-CceEEEEEE
Confidence 44567888888889999864 2 348888876532 223456677777777432 23444443222 457899999
Q ss_pred cccCCCC
Q 022304 99 FIEFGSS 105 (299)
Q Consensus 99 ~l~G~~~ 105 (299)
|++|..+
T Consensus 97 ~~~~~~L 103 (296)
T cd06655 97 YLAGGSL 103 (296)
T ss_pred ecCCCcH
Confidence 9998743
No 285
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=97.44 E-value=0.0027 Score=54.52 Aligned_cols=73 Identities=18% Similarity=0.171 Sum_probs=46.3
Q ss_pred eeCCccccceEEEEeCCc----cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEecc
Q 022304 29 PVGGGCINLASRYGTDAG----SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI 100 (299)
Q Consensus 29 ~~~~G~~n~~y~v~~~~g----~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l 100 (299)
.++.|..+.||+....++ .+++|...... ...+..|...++.+.. ..+++++..... ....+++|||+
T Consensus 2 ~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h---~~iv~~~~~~~~-~~~~~lv~e~~ 77 (269)
T cd05087 2 EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQH---SNLLQCLGQCTE-VTPYLLVMEFC 77 (269)
T ss_pred cccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCC---CCEeeEEEEEcC-CCCcEEEEECC
Confidence 467787889999875432 57888765421 1235567777777743 234555554332 45679999999
Q ss_pred cCCCC
Q 022304 101 EFGSS 105 (299)
Q Consensus 101 ~G~~~ 105 (299)
+|..+
T Consensus 78 ~~g~L 82 (269)
T cd05087 78 PLGDL 82 (269)
T ss_pred CCCcH
Confidence 88643
No 286
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=97.43 E-value=0.0011 Score=59.09 Aligned_cols=70 Identities=10% Similarity=-0.040 Sum_probs=44.3
Q ss_pred eeCCccccceEEEEeC--CccEEEEecCCCCc-----------------chHHHHHHHHHHHHhcCCCCCccceeecccC
Q 022304 29 PVGGGCINLASRYGTD--AGSFFVKTNRSIGP-----------------SMFEGEALGLGAMYETRTIRAPRPFKVGALP 89 (299)
Q Consensus 29 ~~~~G~~n~~y~v~~~--~g~~vlK~~~~~~~-----------------~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~ 89 (299)
.++.|..+.+|++... +..+++|....... ..+..|..+++.+.. -.+++++.....
T Consensus 16 ~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h---~~iv~~~~~~~~- 91 (335)
T PTZ00024 16 HLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKH---ENIMGLVDVYVE- 91 (335)
T ss_pred cccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCC---cceeeeeEEEec-
Confidence 4677888899998753 33788887753211 124578887777753 123344443222
Q ss_pred CCceEEEEecccC
Q 022304 90 TGGSYIIMEFIEF 102 (299)
Q Consensus 90 ~~~~~~v~e~l~G 102 (299)
.+..+++||+++|
T Consensus 92 ~~~~~lv~e~~~~ 104 (335)
T PTZ00024 92 GDFINLVMDIMAS 104 (335)
T ss_pred CCcEEEEEecccc
Confidence 4678999999976
No 287
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=97.43 E-value=0.0013 Score=56.84 Aligned_cols=73 Identities=16% Similarity=0.145 Sum_probs=49.9
Q ss_pred eeeeCCccccceEEEEeCC-c-cEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEec
Q 022304 27 ICPVGGGCINLASRYGTDA-G-SFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 99 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~~~-g-~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~ 99 (299)
.+.++.|..+.+|++...+ + .+++|..... ....+..|.++++.+.. ..+++++..... .+..++++||
T Consensus 6 ~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~---~~i~~~~~~~~~-~~~~~iv~e~ 81 (288)
T cd07833 6 LGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRH---ENIVNLKEAFRR-KGRLYLVFEY 81 (288)
T ss_pred EEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCC---CCeeehhheEEE-CCEEEEEEec
Confidence 4567888788899987643 3 7889976531 23457789988888863 234455544332 4678999999
Q ss_pred ccCC
Q 022304 100 IEFG 103 (299)
Q Consensus 100 l~G~ 103 (299)
+++.
T Consensus 82 ~~~~ 85 (288)
T cd07833 82 VERT 85 (288)
T ss_pred CCCC
Confidence 9874
No 288
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=97.43 E-value=0.0026 Score=54.41 Aligned_cols=76 Identities=20% Similarity=0.060 Sum_probs=48.5
Q ss_pred eeeeeCCccccceEEEEeC-Cc-cEEEEecCCCC---cchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEecc
Q 022304 26 KICPVGGGCINLASRYGTD-AG-SFFVKTNRSIG---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI 100 (299)
Q Consensus 26 ~~~~~~~G~~n~~y~v~~~-~g-~~vlK~~~~~~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l 100 (299)
-+..++.|..+.+|++... ++ .+++|+..... ...+..|+..++.+.. -.+++++..... .+..++++|++
T Consensus 13 ~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h---~~ii~~~~~~~~-~~~~~iv~e~~ 88 (267)
T cd06646 13 LIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKH---CNIVAYFGSYLS-REKLWICMEYC 88 (267)
T ss_pred hhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCC---CCeeeeeEEEEe-CCEEEEEEeCC
Confidence 3567788888899998853 33 68888875421 2345667777666532 223444443322 46789999999
Q ss_pred cCCCC
Q 022304 101 EFGSS 105 (299)
Q Consensus 101 ~G~~~ 105 (299)
+|..+
T Consensus 89 ~~~~L 93 (267)
T cd06646 89 GGGSL 93 (267)
T ss_pred CCCcH
Confidence 88643
No 289
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=97.42 E-value=0.0015 Score=55.71 Aligned_cols=72 Identities=14% Similarity=0.067 Sum_probs=45.9
Q ss_pred eeCCccccceEEEEe--C-Cc-cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEecc
Q 022304 29 PVGGGCINLASRYGT--D-AG-SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI 100 (299)
Q Consensus 29 ~~~~G~~n~~y~v~~--~-~g-~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l 100 (299)
.++.|..+.+|+... . .+ .+.+|+..... ...+..|..+++.+.. ..+.+++.... ....+++|||+
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h---~~ii~~~~~~~--~~~~~lv~e~~ 76 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDN---PYIVRMIGVCE--AEALMLVMEMA 76 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCC---CCeEEEEEEEc--CCCeEEEEEeC
Confidence 367787888998653 2 23 57888876432 2346678888887743 23344444332 35779999999
Q ss_pred cCCCC
Q 022304 101 EFGSS 105 (299)
Q Consensus 101 ~G~~~ 105 (299)
+|.++
T Consensus 77 ~~~~L 81 (257)
T cd05115 77 SGGPL 81 (257)
T ss_pred CCCCH
Confidence 98754
No 290
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=97.42 E-value=0.0027 Score=54.82 Aligned_cols=77 Identities=14% Similarity=0.156 Sum_probs=47.3
Q ss_pred ceeeeeeeCCccccceEEEEe-CCc-----cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCccceeecccCCCc
Q 022304 23 HITKICPVGGGCINLASRYGT-DAG-----SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGG 92 (299)
Q Consensus 23 ~~~~~~~~~~G~~n~~y~v~~-~~g-----~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~ 92 (299)
...-++.++.|..+.+|+++. .++ .+.+|...... ...+..|...+..+.. -.+++++.... ...
T Consensus 8 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~---~~i~~~~~~~~--~~~ 82 (279)
T cd05109 8 ELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGS---PYVCRLLGICL--TST 82 (279)
T ss_pred heeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCC---CCCceEEEEEc--CCC
Confidence 344567888898899999874 333 36788875422 1234456655554432 23445554433 345
Q ss_pred eEEEEecccCCC
Q 022304 93 SYIIMEFIEFGS 104 (299)
Q Consensus 93 ~~~v~e~l~G~~ 104 (299)
.++++++.+++.
T Consensus 83 ~~l~~~~~~~g~ 94 (279)
T cd05109 83 VQLVTQLMPYGC 94 (279)
T ss_pred cEEEEEcCCCCC
Confidence 689999998864
No 291
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=97.41 E-value=0.0023 Score=54.26 Aligned_cols=74 Identities=18% Similarity=0.081 Sum_probs=47.4
Q ss_pred eeeCCccccceEEEEeC-C-ccEEEEecCCCC--------cchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEE
Q 022304 28 CPVGGGCINLASRYGTD-A-GSFFVKTNRSIG--------PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM 97 (299)
Q Consensus 28 ~~~~~G~~n~~y~v~~~-~-g~~vlK~~~~~~--------~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~ 97 (299)
+.++.|..+.+|+.... + ..+++|...... ...+..|...++.+.. ..+++.+..... ....++++
T Consensus 6 ~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h---~~i~~~~~~~~~-~~~~~lv~ 81 (258)
T cd06632 6 ELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQH---PNIVQYLGTERE-EDNLYIFL 81 (258)
T ss_pred ceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCC---CCchheeeeEec-CCeEEEEE
Confidence 45777777899998764 3 378888764311 1235667777766642 234455544332 46789999
Q ss_pred ecccCCCC
Q 022304 98 EFIEFGSS 105 (299)
Q Consensus 98 e~l~G~~~ 105 (299)
||++|..+
T Consensus 82 e~~~~~~L 89 (258)
T cd06632 82 ELVPGGSL 89 (258)
T ss_pred EecCCCcH
Confidence 99998643
No 292
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=97.41 E-value=0.0025 Score=54.98 Aligned_cols=76 Identities=16% Similarity=0.068 Sum_probs=50.0
Q ss_pred eeeeeCCccccceEEEEeC--CccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEec
Q 022304 26 KICPVGGGCINLASRYGTD--AGSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 99 (299)
Q Consensus 26 ~~~~~~~G~~n~~y~v~~~--~g~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~ 99 (299)
.+..++.|..+.+|+.... +..+++|...... ...+..|+.+++.+.. -.+++++..... ....+++|||
T Consensus 8 ~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~lv~e~ 83 (277)
T cd06640 8 KLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDS---PYVTKYYGSYLK-GTKLWIIMEY 83 (277)
T ss_pred hhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCC---CCEeeEEEEEEE-CCEEEEEEec
Confidence 4567888888899998753 3378889875321 1335567776666632 235556654433 4678999999
Q ss_pred ccCCCC
Q 022304 100 IEFGSS 105 (299)
Q Consensus 100 l~G~~~ 105 (299)
++|..+
T Consensus 84 ~~~~~L 89 (277)
T cd06640 84 LGGGSA 89 (277)
T ss_pred CCCCcH
Confidence 999754
No 293
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=97.41 E-value=0.001 Score=60.31 Aligned_cols=73 Identities=12% Similarity=0.094 Sum_probs=45.1
Q ss_pred eeeeCCccccceEEEEeC-C-ccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCCccceeecccC----CCceEE
Q 022304 27 ICPVGGGCINLASRYGTD-A-GSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP----TGGSYI 95 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~~-~-g~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~----~~~~~~ 95 (299)
.+.+|.|..+.||++... + ..+++|..... ....+..|..+++.+... .+.+++...... ....++
T Consensus 5 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~~~~~~~~~~~~~~~~~~l 81 (372)
T cd07853 5 DRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHD---NVLSALDILQPPHIDPFEEIYV 81 (372)
T ss_pred cceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCC---CcCCHhheecCCCccccceEEE
Confidence 456888888999998853 3 37889976532 113356788888777532 233333322211 125789
Q ss_pred EEecccC
Q 022304 96 IMEFIEF 102 (299)
Q Consensus 96 v~e~l~G 102 (299)
+++++.+
T Consensus 82 v~e~~~~ 88 (372)
T cd07853 82 VTELMQS 88 (372)
T ss_pred Eeecccc
Confidence 9999865
No 294
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=97.41 E-value=0.0019 Score=58.03 Aligned_cols=75 Identities=12% Similarity=0.135 Sum_probs=44.7
Q ss_pred eeeeeCCccccceEEEEeC--CccEEEEecCCC--C---cchHHHHHHHHHHHHhcCCCCCccceeecccC-----CCce
Q 022304 26 KICPVGGGCINLASRYGTD--AGSFFVKTNRSI--G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALP-----TGGS 93 (299)
Q Consensus 26 ~~~~~~~G~~n~~y~v~~~--~g~~vlK~~~~~--~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~-----~~~~ 93 (299)
-++.+|.|..+.||++... +..+.+|..... . ...+.+|...++.+... .+.+++...... ....
T Consensus 21 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~~~~~~~~~~~~~~~~~~ 97 (355)
T cd07874 21 NLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK---NIISLLNVFTPQKSLEEFQDV 97 (355)
T ss_pred EEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCC---chhceeeeeecccccccccee
Confidence 3567888888999998753 337888876532 1 12345677777777532 223333221110 2356
Q ss_pred EEEEecccCC
Q 022304 94 YIIMEFIEFG 103 (299)
Q Consensus 94 ~~v~e~l~G~ 103 (299)
+++||+++|.
T Consensus 98 ~lv~e~~~~~ 107 (355)
T cd07874 98 YLVMELMDAN 107 (355)
T ss_pred EEEhhhhccc
Confidence 8999999763
No 295
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=97.40 E-value=0.0014 Score=59.61 Aligned_cols=76 Identities=16% Similarity=0.138 Sum_probs=50.3
Q ss_pred eeeeCCccccceEEEEe--CCccEEEEecCCC-------------C----cchHHHHHHHHHHHHhcCCCCCccceeecc
Q 022304 27 ICPVGGGCINLASRYGT--DAGSFFVKTNRSI-------------G----PSMFEGEALGLGAMYETRTIRAPRPFKVGA 87 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~--~~g~~vlK~~~~~-------------~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~ 87 (299)
...+|.|...-|-.... ++.-|.+|+-+.. . ....++|+++++.|.. ..|.+++..-+
T Consensus 102 ~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H---~nVV~LiEvLD 178 (576)
T KOG0585|consen 102 IKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHH---PNVVKLIEVLD 178 (576)
T ss_pred hhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCC---cCeeEEEEeec
Confidence 35677777655444332 2336778877531 0 1467899999999964 46777776644
Q ss_pred cC-CCceEEEEecccCCCC
Q 022304 88 LP-TGGSYIIMEFIEFGSS 105 (299)
Q Consensus 88 ~~-~~~~~~v~e~l~G~~~ 105 (299)
+. ....|||+||+..++.
T Consensus 179 DP~s~~~YlVley~s~G~v 197 (576)
T KOG0585|consen 179 DPESDKLYLVLEYCSKGEV 197 (576)
T ss_pred CcccCceEEEEEeccCCcc
Confidence 43 5789999999987643
No 296
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=97.40 E-value=0.0029 Score=54.56 Aligned_cols=74 Identities=15% Similarity=0.063 Sum_probs=42.5
Q ss_pred eeeeeCCccccceEEEEeC-Cc-cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEec
Q 022304 26 KICPVGGGCINLASRYGTD-AG-SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 99 (299)
Q Consensus 26 ~~~~~~~G~~n~~y~v~~~-~g-~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~ 99 (299)
-++.++.|..+.||++... +| .+++|...... ...+..|...+.....+ ..+++++..... .+..++++|+
T Consensus 5 ~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~--~~iv~~~~~~~~-~~~~~lv~e~ 81 (283)
T cd06617 5 VIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDC--PYTVTFYGALFR-EGDVWICMEV 81 (283)
T ss_pred EEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCC--CCeeeeeEEEec-CCcEEEEhhh
Confidence 4567888888999998764 34 78889775421 11222333322222122 234444444322 4678999999
Q ss_pred ccC
Q 022304 100 IEF 102 (299)
Q Consensus 100 l~G 102 (299)
++|
T Consensus 82 ~~~ 84 (283)
T cd06617 82 MDT 84 (283)
T ss_pred hcc
Confidence 876
No 297
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=97.40 E-value=0.00055 Score=59.63 Aligned_cols=75 Identities=15% Similarity=0.082 Sum_probs=48.3
Q ss_pred eeeeCCccccceEEEEeCC------c-cEEEEecCCCC---cchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEE
Q 022304 27 ICPVGGGCINLASRYGTDA------G-SFFVKTNRSIG---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII 96 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~~~------g-~~vlK~~~~~~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v 96 (299)
...++.|..+.+|++...+ + .+.+|...... ...+..|+..++.+.. -.+.+++..... .+..+++
T Consensus 10 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~lv 85 (291)
T cd05094 10 KRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQH---EHIVKFYGVCGD-GDPLIMV 85 (291)
T ss_pred eeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCC---CCcceEEEEEcc-CCceEEE
Confidence 3567888888999986421 2 46677765432 2346677777776643 234555554433 4678999
Q ss_pred EecccCCCC
Q 022304 97 MEFIEFGSS 105 (299)
Q Consensus 97 ~e~l~G~~~ 105 (299)
|||++|.++
T Consensus 86 ~e~~~~~~L 94 (291)
T cd05094 86 FEYMKHGDL 94 (291)
T ss_pred EecCCCCcH
Confidence 999998754
No 298
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=97.40 E-value=0.0033 Score=55.20 Aligned_cols=90 Identities=11% Similarity=-0.011 Sum_probs=51.6
Q ss_pred hHHHHHHhcCCCcceeeeeeeCCccccceEEEEeC--CccEEEEecCCC---C---cchHHHHHHHHHHHHhcCCCCCcc
Q 022304 10 PIREWILSEGKATHITKICPVGGGCINLASRYGTD--AGSFFVKTNRSI---G---PSMFEGEALGLGAMYETRTIRAPR 81 (299)
Q Consensus 10 ~i~~~l~~~~~~~~~~~~~~~~~G~~n~~y~v~~~--~g~~vlK~~~~~---~---~~~~~~E~~~l~~L~~~~~~~vP~ 81 (299)
++++.+....+.........++.|..+.+|++... +..+++|..... . ...+..|..+++.+... -+.+
T Consensus 3 ~~~~~~~~~~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~---niv~ 79 (307)
T cd06607 3 EIAELFSKDDPEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHP---NTIE 79 (307)
T ss_pred hHHHhhcCCCcchhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCC---CEEE
Confidence 34444443322222234567888888899998763 337888876421 1 12355677777776431 2233
Q ss_pred ceeecccCCCceEEEEecccCC
Q 022304 82 PFKVGALPTGGSYIIMEFIEFG 103 (299)
Q Consensus 82 ~~~~~~~~~~~~~~v~e~l~G~ 103 (299)
++..... .+..++++|+++|.
T Consensus 80 ~~~~~~~-~~~~~lv~e~~~g~ 100 (307)
T cd06607 80 YKGCYLR-EHTAWLVMEYCLGS 100 (307)
T ss_pred EEEEEEe-CCeEEEEHHhhCCC
Confidence 3333222 46789999999863
No 299
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=97.39 E-value=0.0041 Score=54.89 Aligned_cols=75 Identities=12% Similarity=-0.015 Sum_probs=46.5
Q ss_pred eeeeeeeCCccccceEEEEeC-Cc-cEEEEecCCCC------cchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEE
Q 022304 24 ITKICPVGGGCINLASRYGTD-AG-SFFVKTNRSIG------PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI 95 (299)
Q Consensus 24 ~~~~~~~~~G~~n~~y~v~~~-~g-~~vlK~~~~~~------~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~ 95 (299)
......++.|..+.+|++... ++ .+++|...... ...+..|.++++.+.. -.+.+.+..... ....++
T Consensus 27 f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h---~~iv~~~~~~~~-~~~~~l 102 (317)
T cd06635 27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKH---PNSIEYKGCYLR-EHTAWL 102 (317)
T ss_pred hhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCC---CCEEEEEEEEee-CCeEEE
Confidence 345677888888899998763 33 78888765321 1235567776666642 123333333222 457899
Q ss_pred EEecccC
Q 022304 96 IMEFIEF 102 (299)
Q Consensus 96 v~e~l~G 102 (299)
+|||+.|
T Consensus 103 v~e~~~g 109 (317)
T cd06635 103 VMEYCLG 109 (317)
T ss_pred EEeCCCC
Confidence 9999987
No 300
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=97.39 E-value=0.0025 Score=55.34 Aligned_cols=75 Identities=12% Similarity=0.004 Sum_probs=46.6
Q ss_pred eeeeCCccccceEEEEeCC--ccEEEEecCCCC------cchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEe
Q 022304 27 ICPVGGGCINLASRYGTDA--GSFFVKTNRSIG------PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 98 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~~~--g~~vlK~~~~~~------~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e 98 (299)
.+.++.|..+.+|.+.... ..|++|...... ...+..|..+++.+... .+...+..... .+..+++|+
T Consensus 5 ~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~---~i~~~~~~~~~-~~~~~lv~e 80 (285)
T cd05630 5 YRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSR---FVVSLAYAYET-KDALCLVLT 80 (285)
T ss_pred eEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCC---CeeeeeEEEec-CCEEEEEEE
Confidence 4567888888999887642 378888764311 12244677777777432 22223332222 467899999
Q ss_pred cccCCCC
Q 022304 99 FIEFGSS 105 (299)
Q Consensus 99 ~l~G~~~ 105 (299)
+++|..+
T Consensus 81 ~~~g~~L 87 (285)
T cd05630 81 LMNGGDL 87 (285)
T ss_pred ecCCCcH
Confidence 9998744
No 301
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=97.39 E-value=0.0013 Score=56.23 Aligned_cols=74 Identities=14% Similarity=0.023 Sum_probs=46.6
Q ss_pred eeeCCccccceEEEEe--CCccEEEEecCC-C-----CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEec
Q 022304 28 CPVGGGCINLASRYGT--DAGSFFVKTNRS-I-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 99 (299)
Q Consensus 28 ~~~~~G~~n~~y~v~~--~~g~~vlK~~~~-~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~ 99 (299)
+.++.|..+.+|++.. ++..+++|.... . ....+..|...++.+.. -.+++++..... .+..+++|++
T Consensus 8 ~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h---~~i~~~~~~~~~-~~~~~~v~e~ 83 (267)
T cd08229 8 KKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNH---PNVIKYYASFIE-DNELNIVLEL 83 (267)
T ss_pred hhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccC---CchhhhhheeEe-CCeEEEEEEe
Confidence 4567777788999885 334888886542 1 11335567777776643 234444443322 4688999999
Q ss_pred ccCCCC
Q 022304 100 IEFGSS 105 (299)
Q Consensus 100 l~G~~~ 105 (299)
++|..+
T Consensus 84 ~~~~~L 89 (267)
T cd08229 84 ADAGDL 89 (267)
T ss_pred cCCCCH
Confidence 998744
No 302
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=97.38 E-value=0.0013 Score=59.62 Aligned_cols=184 Identities=16% Similarity=0.122 Sum_probs=108.3
Q ss_pred eeeeCCccccceEEEEeCCccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCCccceeec-ccC-----CCceEEEEecc
Q 022304 27 ICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVG-ALP-----TGGSYIIMEFI 100 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~~~g~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~-~~~-----~~~~~~v~e~l 100 (299)
.+-++.|-...||+-...+..+.||+++......+..|.++++.. +..-+.++.+- ..+ .-..++|++|-
T Consensus 215 ~eli~~Grfg~V~KaqL~~~~VAVKifp~~~kqs~~~Ek~Iy~lp----~m~h~nIl~Fi~~ekr~t~~~~eywLVt~fh 290 (534)
T KOG3653|consen 215 LELIGRGRFGCVWKAQLDNRLVAVKIFPEQEKQSFQNEKNIYSLP----GMKHENILQFIGAEKRGTADRMEYWLVTEFH 290 (534)
T ss_pred HHHhhcCccceeehhhccCceeEEEecCHHHHHHHHhHHHHHhcc----CccchhHHHhhchhccCCccccceeEEeeec
Confidence 344577888899999998889999999876666778888877654 34445555331 111 12678888887
Q ss_pred cCCCCCCcHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCCCCHHHHHHHhhhHHHHHHHHhhcCChHHHHHHH
Q 022304 101 EFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGH 180 (299)
Q Consensus 101 ~G~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (299)
+-+.+ -+.|.. |. -+|.+.. ++..-+ .+-++
T Consensus 291 ~kGsL-------~dyL~~-nt--------------------------isw~~~c---ria~Sm------------arGLa 321 (534)
T KOG3653|consen 291 PKGSL-------CDYLKA-NT--------------------------ISWNSLC---RIAESM------------ARGLA 321 (534)
T ss_pred cCCcH-------HHHHHh-cc--------------------------ccHHHHH---HHHHHH------------HHHHH
Confidence 66533 222221 00 1343221 121111 11122
Q ss_pred HHHHHHhccccCCCCCcceeccCCCCCCeeecCCCCeEEEccc-cc---cCCchhhhhh-h-hhcCCChhhHHHhhhhCC
Q 022304 181 RLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA-CY---YGHNEAEFGM-S-WCAGFGGSFYNSYFEVMP 254 (299)
Q Consensus 181 ~~~~~l~~~l~~~~~~~~liHgDl~~~Nvl~~~~~~~~iID~~-~~---~g~~~~Dla~-~-~~~~~~~~f~~~Y~~~~~ 254 (299)
.+-+.++ ..+ ...+.+.|+|+++.|||+.+|..-.|-||. ++ .|-+.-|... . ....+....+||--....
T Consensus 322 ~LHee~p--~~d-~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d 398 (534)
T KOG3653|consen 322 HLHEELP--RGD-HHKPPIAHRDLKSKNVLVKNDLTCCIADFGLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQD 398 (534)
T ss_pred HhcccCC--cCC-CCCCccccccccccceEEccCCcEEeeccceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhccccc
Confidence 2222222 112 367899999999999999888766788874 43 4555555542 1 112355677777665432
Q ss_pred CCCCHHHHHHHHHH
Q 022304 255 KQPGFEKRRDLYML 268 (299)
Q Consensus 255 l~~~~~~r~~~~~l 268 (299)
++...|+.+|.+
T Consensus 399 --~~Afkr~DvYam 410 (534)
T KOG3653|consen 399 --RDAFKRIDVYAM 410 (534)
T ss_pred --HHHHHHHHHHHH
Confidence 455688999864
No 303
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=97.38 E-value=0.0017 Score=57.29 Aligned_cols=80 Identities=18% Similarity=0.165 Sum_probs=51.6
Q ss_pred ceeeeeeeCCccccceEEEEeC---------CccEEEEecCCC-C---cchHHHHHHHHHHHHhcCCCCCccceeecccC
Q 022304 23 HITKICPVGGGCINLASRYGTD---------AGSFFVKTNRSI-G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALP 89 (299)
Q Consensus 23 ~~~~~~~~~~G~~n~~y~v~~~---------~g~~vlK~~~~~-~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~ 89 (299)
...-...++.|..+.+|+++.. ...+.+|..... . ...+..|...++.+..+ -.+.+++.....
T Consensus 13 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h--~~iv~~~~~~~~- 89 (314)
T cd05099 13 RLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKH--KNIINLLGVCTQ- 89 (314)
T ss_pred HeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCC--CCeeeEEEEEcc-
Confidence 3444577888888999998631 125788887642 1 12355788777777543 245555554432
Q ss_pred CCceEEEEecccCCCC
Q 022304 90 TGGSYIIMEFIEFGSS 105 (299)
Q Consensus 90 ~~~~~~v~e~l~G~~~ 105 (299)
.+..+++||+++|..+
T Consensus 90 ~~~~~lv~e~~~~g~L 105 (314)
T cd05099 90 EGPLYVIVEYAAKGNL 105 (314)
T ss_pred CCceEEEEecCCCCcH
Confidence 4678999999998744
No 304
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=97.38 E-value=0.0015 Score=55.46 Aligned_cols=75 Identities=17% Similarity=0.142 Sum_probs=49.9
Q ss_pred eeeeCCccccceEEEEeCC--ccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEec
Q 022304 27 ICPVGGGCINLASRYGTDA--GSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 99 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~~~--g~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~ 99 (299)
.+.++.|..+.+|++...+ +.+++|..... ....+..|+..++.+.. ..+++++..... .+..++++|+
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h---~~i~~~~~~~~~-~~~~~lv~e~ 80 (257)
T cd08225 5 IKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKH---PNIVTFFASFQE-NGRLFIVMEY 80 (257)
T ss_pred EEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCC---CChhhhhheecc-CCeEEEEEec
Confidence 4567778788999988743 37888876431 23456678888877753 234445544332 4688999999
Q ss_pred ccCCCC
Q 022304 100 IEFGSS 105 (299)
Q Consensus 100 l~G~~~ 105 (299)
++|..+
T Consensus 81 ~~~~~L 86 (257)
T cd08225 81 CDGGDL 86 (257)
T ss_pred CCCCcH
Confidence 988643
No 305
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=97.38 E-value=0.0019 Score=56.73 Aligned_cols=77 Identities=13% Similarity=0.067 Sum_probs=50.4
Q ss_pred eeeeeCCccccceEEEEeC------C-ccEEEEecCCC-C---cchHHHHHHHHHHHHhcCCCCCccceeecccCCCceE
Q 022304 26 KICPVGGGCINLASRYGTD------A-GSFFVKTNRSI-G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSY 94 (299)
Q Consensus 26 ~~~~~~~G~~n~~y~v~~~------~-g~~vlK~~~~~-~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~ 94 (299)
-.+.++.|..+.+|+.+.. . ..+.+|..... . ...+..|..+++.+.++ -.+.+++..... .+..+
T Consensus 39 ~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h--~~iv~~~~~~~~-~~~~~ 115 (302)
T cd05055 39 FGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNH--ENIVNLLGACTI-GGPIL 115 (302)
T ss_pred EcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCC--CCcceEEEEEec-CCceE
Confidence 3466788888889987631 1 25778876532 1 23466788888888544 245555554433 46789
Q ss_pred EEEecccCCCC
Q 022304 95 IIMEFIEFGSS 105 (299)
Q Consensus 95 ~v~e~l~G~~~ 105 (299)
++||+++|..+
T Consensus 116 lv~e~~~~~~L 126 (302)
T cd05055 116 VITEYCCYGDL 126 (302)
T ss_pred EEEEcCCCCcH
Confidence 99999998744
No 306
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=97.37 E-value=0.0036 Score=54.13 Aligned_cols=74 Identities=14% Similarity=0.074 Sum_probs=46.0
Q ss_pred eeeCCccccceEEEEeCC-c-cEEEEecCCCC---cchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEecccC
Q 022304 28 CPVGGGCINLASRYGTDA-G-SFFVKTNRSIG---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEF 102 (299)
Q Consensus 28 ~~~~~G~~n~~y~v~~~~-g-~~vlK~~~~~~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G 102 (299)
..++.|..+.+|++.... + .+.+|...... ...+..|...++.+.. -.+++++..... .+..++++||++|
T Consensus 11 ~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h---~~ii~~~~~~~~-~~~~~~v~e~~~~ 86 (282)
T cd06643 11 GELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDH---PNIVKLLDAFYY-ENNLWILIEFCAG 86 (282)
T ss_pred hhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCC---CCeeeEEEEEee-CCEEEEEEEecCC
Confidence 346677778899987653 3 56677665322 2335567777777743 234445443322 4678999999998
Q ss_pred CCC
Q 022304 103 GSS 105 (299)
Q Consensus 103 ~~~ 105 (299)
..+
T Consensus 87 ~~l 89 (282)
T cd06643 87 GAV 89 (282)
T ss_pred CcH
Confidence 743
No 307
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=97.37 E-value=0.0013 Score=56.69 Aligned_cols=75 Identities=16% Similarity=0.067 Sum_probs=47.2
Q ss_pred eeeeCCccccceEEEEeC-Cc-cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEecc
Q 022304 27 ICPVGGGCINLASRYGTD-AG-SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI 100 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~~-~g-~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l 100 (299)
++.++.|..+.+|+.... .+ .+++|...... ...+..|+..++.+.. -.+++++..... ....++++|++
T Consensus 9 ~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~lv~e~~ 84 (277)
T cd06642 9 LERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDS---PYITRYYGSYLK-GTKLWIIMEYL 84 (277)
T ss_pred HHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCC---CccHhhhccccc-CCceEEEEEcc
Confidence 345677878899998653 33 78889876321 2345677777766642 234444443322 45789999999
Q ss_pred cCCCC
Q 022304 101 EFGSS 105 (299)
Q Consensus 101 ~G~~~ 105 (299)
+|..+
T Consensus 85 ~~~~L 89 (277)
T cd06642 85 GGGSA 89 (277)
T ss_pred CCCcH
Confidence 98643
No 308
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=97.37 E-value=0.0028 Score=53.78 Aligned_cols=72 Identities=15% Similarity=0.135 Sum_probs=43.9
Q ss_pred eeCCccccceEEEEeCCc------------cEEEEecCCCC--cchHHHHHHHHHHHHhcCCCCCccceeecccCCCceE
Q 022304 29 PVGGGCINLASRYGTDAG------------SFFVKTNRSIG--PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSY 94 (299)
Q Consensus 29 ~~~~G~~n~~y~v~~~~g------------~~vlK~~~~~~--~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~ 94 (299)
.++.|..+.+|+....+. .+++|...... ...+..|...++.+.. ..+.+++..... +..+
T Consensus 2 ~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~--~~~~ 76 (259)
T cd05037 2 HLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRDSLAFFETASLMSQLSH---KHLVKLYGVCVR--DENI 76 (259)
T ss_pred cccccccceEEEEEEeccCCccccCCccceeeeeeccccchhhHHHHHHHHHHHHcCCC---cchhheeeEEec--CCcE
Confidence 467777788998776432 25667655422 2345567766666632 234444444322 5679
Q ss_pred EEEecccCCCC
Q 022304 95 IIMEFIEFGSS 105 (299)
Q Consensus 95 ~v~e~l~G~~~ 105 (299)
+++||++|..+
T Consensus 77 lv~e~~~~~~L 87 (259)
T cd05037 77 MVEEYVKFGPL 87 (259)
T ss_pred EEEEcCCCCcH
Confidence 99999998743
No 309
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=97.36 E-value=0.0024 Score=55.17 Aligned_cols=73 Identities=11% Similarity=0.066 Sum_probs=46.6
Q ss_pred eeeeCCccccceEEEEeC-Cc-cEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEec
Q 022304 27 ICPVGGGCINLASRYGTD-AG-SFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 99 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~~-~g-~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~ 99 (299)
+..++.|..+.+|++... ++ .+++|..... ....+..|+.+++.+.. -.+.+++..... ....+++|||
T Consensus 6 ~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h---~~i~~~~~~~~~-~~~~~~v~e~ 81 (286)
T cd07847 6 LSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKH---PNLVNLIEVFRR-KRKLHLVFEY 81 (286)
T ss_pred eeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCC---CCEeeeeeEEee-CCEEEEEEec
Confidence 456788888899998764 23 7888876421 12335578887777743 123444433322 4578999999
Q ss_pred ccCC
Q 022304 100 IEFG 103 (299)
Q Consensus 100 l~G~ 103 (299)
++|.
T Consensus 82 ~~~~ 85 (286)
T cd07847 82 CDHT 85 (286)
T ss_pred cCcc
Confidence 9874
No 310
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=97.36 E-value=0.0029 Score=55.86 Aligned_cols=78 Identities=18% Similarity=0.184 Sum_probs=49.1
Q ss_pred ceeeeeeeCCccccceEEEEe-CCc-----cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCccceeecccCCCc
Q 022304 23 HITKICPVGGGCINLASRYGT-DAG-----SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGG 92 (299)
Q Consensus 23 ~~~~~~~~~~G~~n~~y~v~~-~~g-----~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~ 92 (299)
....+..+|.|..+.||+... .++ .+.+|...... ...+..|...++.+.. -.+.+++.... .+.
T Consensus 8 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h---~niv~~~g~~~--~~~ 82 (316)
T cd05108 8 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN---PHVCRLLGICL--TST 82 (316)
T ss_pred hceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCC---CCCCeEEEEEc--CCC
Confidence 344567889898899999864 223 37888875321 2335567777766642 23455555443 346
Q ss_pred eEEEEecccCCCC
Q 022304 93 SYIIMEFIEFGSS 105 (299)
Q Consensus 93 ~~~v~e~l~G~~~ 105 (299)
.+++++++++..+
T Consensus 83 ~~~v~e~~~~g~l 95 (316)
T cd05108 83 VQLITQLMPFGCL 95 (316)
T ss_pred ceeeeecCCCCCH
Confidence 6889999887643
No 311
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=97.36 E-value=0.0018 Score=55.55 Aligned_cols=77 Identities=14% Similarity=0.042 Sum_probs=47.9
Q ss_pred eeeeCCccccceEEEEeCC--ccEEEEecCCC--CcchHHHHHHHHHHHHhcCCCCCccceeecccC-----CCceEEEE
Q 022304 27 ICPVGGGCINLASRYGTDA--GSFFVKTNRSI--GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP-----TGGSYIIM 97 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~~~--g~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~-----~~~~~~v~ 97 (299)
.+.++.|..+.+|+....+ ..+++|..... ....+..|...+..+..+ -.+.+.+...... ....+++|
T Consensus 11 ~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~~~~h--~~i~~~~~~~~~~~~~~~~~~~~iv~ 88 (272)
T cd06637 11 VELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHH--RNIATYYGAFIKKNPPGMDDQLWLVM 88 (272)
T ss_pred HHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCccHHHHHHHHHHHHHhcCC--CCeeeEeeEEeecCCCCCCcEEEEEE
Confidence 4567778888999987532 36888887532 234567788888777543 2334444322110 23578999
Q ss_pred ecccCCCC
Q 022304 98 EFIEFGSS 105 (299)
Q Consensus 98 e~l~G~~~ 105 (299)
|+++|..+
T Consensus 89 e~~~~~~L 96 (272)
T cd06637 89 EFCGAGSV 96 (272)
T ss_pred EcCCCCcH
Confidence 99988643
No 312
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=97.36 E-value=0.0036 Score=54.11 Aligned_cols=74 Identities=14% Similarity=0.073 Sum_probs=48.1
Q ss_pred eeeCCccccceEEEEe---C--C-ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEE
Q 022304 28 CPVGGGCINLASRYGT---D--A-GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM 97 (299)
Q Consensus 28 ~~~~~G~~n~~y~v~~---~--~-g~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~ 97 (299)
+.++.|..+.+|+... + . ..+.+|...... ...+..|..+++.+.. -.+++++..... ....+++|
T Consensus 11 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h---~niv~~~~~~~~-~~~~~lv~ 86 (283)
T cd05090 11 EELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHH---PNIVCLLGVVTQ-EQPVCMLF 86 (283)
T ss_pred eeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCC---CCeeeEEEEEec-CCceEEEE
Confidence 6678888889999763 1 2 267788775321 1346678888877743 234555554332 45789999
Q ss_pred ecccCCCC
Q 022304 98 EFIEFGSS 105 (299)
Q Consensus 98 e~l~G~~~ 105 (299)
||+++.++
T Consensus 87 e~~~~~~L 94 (283)
T cd05090 87 EYLNQGDL 94 (283)
T ss_pred EcCCCCcH
Confidence 99998644
No 313
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=97.36 E-value=0.00018 Score=59.37 Aligned_cols=75 Identities=13% Similarity=0.103 Sum_probs=51.3
Q ss_pred eeeeCCccccceEEEE--eCCccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCCccceeecccC-CCceEEEEecccCC
Q 022304 27 ICPVGGGCINLASRYG--TDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALP-TGGSYIIMEFIEFG 103 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~--~~~g~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~-~~~~~~v~e~l~G~ 103 (299)
+.++|.|-.+.||.-. +++.+.|+|+-.+.-...+.+|+.+|+.|+. +-.+-+++...... ...+.+++|++...
T Consensus 43 vrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVkkkKIkREikIL~nL~g--g~NIi~L~DiV~Dp~SktpaLiFE~v~n~ 120 (338)
T KOG0668|consen 43 VRKVGRGKYSEVFEGINITNNEKCVIKILKPVKKKKIKREIKILQNLRG--GPNIIKLLDIVKDPESKTPSLIFEYVNNT 120 (338)
T ss_pred HHHHcCccHhhHhcccccCCCceEEEeeechHHHHHHHHHHHHHHhccC--CCCeeehhhhhcCccccCchhHhhhhccc
Confidence 4678999899999855 4556899999877656779999999999974 33344444332221 23566666666554
No 314
>PTZ00036 glycogen synthase kinase; Provisional
Probab=97.35 E-value=0.0034 Score=58.40 Aligned_cols=75 Identities=13% Similarity=0.007 Sum_probs=46.1
Q ss_pred eeeeeeeCCccccceEEEEeC-Cc-cEEEEecCCCCcchHHHHHHHHHHHHhcCCCCCcccee---ecccC----CCceE
Q 022304 24 ITKICPVGGGCINLASRYGTD-AG-SFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFK---VGALP----TGGSY 94 (299)
Q Consensus 24 ~~~~~~~~~G~~n~~y~v~~~-~g-~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~~~vP~~~~---~~~~~----~~~~~ 94 (299)
..-.+.+|.|..+.||++... .+ .+.+|..... .....+|+.+++.|... .+.+++. ..... ....+
T Consensus 68 y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~-~~~~~~Ei~il~~l~h~---niv~l~~~~~~~~~~~~~~~~~l~ 143 (440)
T PTZ00036 68 YKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQD-PQYKNRELLIMKNLNHI---NIIFLKDYYYTECFKKNEKNIFLN 143 (440)
T ss_pred EEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecC-cchHHHHHHHHHhcCCC---CCcceeeeEeecccccCCCceEEE
Confidence 344577888888999998763 33 7888876542 23346789888888532 2333322 11111 12356
Q ss_pred EEEecccC
Q 022304 95 IIMEFIEF 102 (299)
Q Consensus 95 ~v~e~l~G 102 (299)
++|||++|
T Consensus 144 lvmE~~~~ 151 (440)
T PTZ00036 144 VVMEFIPQ 151 (440)
T ss_pred EEEecCCc
Confidence 89999986
No 315
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=97.35 E-value=0.0041 Score=53.56 Aligned_cols=75 Identities=17% Similarity=0.119 Sum_probs=45.1
Q ss_pred eeeeCCccccceEEEEeC-------CccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEE
Q 022304 27 ICPVGGGCINLASRYGTD-------AGSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI 95 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~~-------~g~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~ 95 (299)
...++.|..+.+|+.... ...+.+|...... ...+..|...++.+.. -.+++++..... .+..++
T Consensus 11 ~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~---~~iv~~~~~~~~-~~~~~l 86 (277)
T cd05062 11 SRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNC---HHVVRLLGVVSQ-GQPTLV 86 (277)
T ss_pred eeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCC---CCeeeEEEEEcC-CCCeEE
Confidence 456788877889976532 1268888764321 1224566766666532 234445544322 467899
Q ss_pred EEecccCCCC
Q 022304 96 IMEFIEFGSS 105 (299)
Q Consensus 96 v~e~l~G~~~ 105 (299)
+||+++|.++
T Consensus 87 v~e~~~~~~L 96 (277)
T cd05062 87 IMELMTRGDL 96 (277)
T ss_pred EEecCCCCCH
Confidence 9999998743
No 316
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=97.35 E-value=0.0022 Score=55.40 Aligned_cols=77 Identities=14% Similarity=0.031 Sum_probs=48.2
Q ss_pred eeeeCCccccceEEEEeC-C-ccEEEEecCCC--CcchHHHHHHHHHHHHhcCCCCCccceeeccc-----CCCceEEEE
Q 022304 27 ICPVGGGCINLASRYGTD-A-GSFFVKTNRSI--GPSMFEGEALGLGAMYETRTIRAPRPFKVGAL-----PTGGSYIIM 97 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~~-~-g~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~-----~~~~~~~v~ 97 (299)
++.++.|..+.+|++... . ..+.+|+.... ....+..|...++.+..+ -.+.+.+..... .....+++|
T Consensus 21 ~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~~~~h--~~i~~~~~~~~~~~~~~~~~~~~iv~ 98 (282)
T cd06636 21 VEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKYSHH--RNIATYYGAFIKKSPPGHDDQLWLVM 98 (282)
T ss_pred heeeccCCCeEEEEEEEcCCCcEEEEEEEecChHHHHHHHHHHHHHHHhcCC--CcEEEEeeehhcccccCCCCEEEEEE
Confidence 467888888899998763 2 37888887542 223466777777777543 123334333211 024679999
Q ss_pred ecccCCCC
Q 022304 98 EFIEFGSS 105 (299)
Q Consensus 98 e~l~G~~~ 105 (299)
|+++|..+
T Consensus 99 e~~~~~~L 106 (282)
T cd06636 99 EFCGAGSV 106 (282)
T ss_pred EeCCCCcH
Confidence 99988644
No 317
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=97.35 E-value=0.0017 Score=56.06 Aligned_cols=73 Identities=18% Similarity=0.221 Sum_probs=47.0
Q ss_pred eeeeCCccccceEEEEeCC-c-cEEEEecCCCC-----cchHHHHHHHHHHHHhcCCCCCccceeecccC-CCceEEEEe
Q 022304 27 ICPVGGGCINLASRYGTDA-G-SFFVKTNRSIG-----PSMFEGEALGLGAMYETRTIRAPRPFKVGALP-TGGSYIIME 98 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~~~-g-~~vlK~~~~~~-----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~-~~~~~~v~e 98 (299)
+..++.|..+.+|++...+ + .+++|...... ...+..|+.+++.+.. -.+.+++...... .+..+++++
T Consensus 4 ~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~---~~i~~~~~~~~~~~~~~~~lv~e 80 (287)
T cd07840 4 IAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRH---PNIVRLKEIVTSKGKGSIYMVFE 80 (287)
T ss_pred eEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccC---CCeeeheeeEecCCCCcEEEEec
Confidence 4567888889999998653 3 78888876421 2235678888877753 1233344333221 267899999
Q ss_pred cccC
Q 022304 99 FIEF 102 (299)
Q Consensus 99 ~l~G 102 (299)
++++
T Consensus 81 ~~~~ 84 (287)
T cd07840 81 YMDH 84 (287)
T ss_pred cccc
Confidence 9975
No 318
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=97.35 E-value=0.0021 Score=55.93 Aligned_cols=75 Identities=21% Similarity=0.174 Sum_probs=48.5
Q ss_pred eeeeCCccccceEEEEeCCc------------------cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcccee
Q 022304 27 ICPVGGGCINLASRYGTDAG------------------SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFK 84 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~~~g------------------~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~ 84 (299)
++.+|.|..+.+|+++..+. .+++|...... ...+..|+++++.+.. -.+.+++.
T Consensus 10 ~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~---~~i~~~~~ 86 (296)
T cd05051 10 VEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSD---PNIARLLG 86 (296)
T ss_pred cccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCC---CCEeEEEE
Confidence 46778888888998765321 36778765421 2345678888887753 23444554
Q ss_pred ecccCCCceEEEEecccCCCC
Q 022304 85 VGALPTGGSYIIMEFIEFGSS 105 (299)
Q Consensus 85 ~~~~~~~~~~~v~e~l~G~~~ 105 (299)
.... ++..++++++++|..+
T Consensus 87 ~~~~-~~~~~lv~e~~~~~~L 106 (296)
T cd05051 87 VCTV-DPPLCMIMEYMENGDL 106 (296)
T ss_pred EEec-CCCcEEEEecCCCCCH
Confidence 4332 4688999999998643
No 319
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=97.34 E-value=0.0021 Score=56.40 Aligned_cols=74 Identities=18% Similarity=0.092 Sum_probs=46.2
Q ss_pred eeeeeCCccccceEEEEeC--CccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCCccceeecccC-CCceEEEE
Q 022304 26 KICPVGGGCINLASRYGTD--AGSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP-TGGSYIIM 97 (299)
Q Consensus 26 ~~~~~~~G~~n~~y~v~~~--~g~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~-~~~~~~v~ 97 (299)
-+..++.|..+.+|++... +..+++|..... .......|..+++.+... .+.+++..-... .+..+++|
T Consensus 11 ~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~---~i~~~~~~~~~~~~~~~~lv~ 87 (309)
T cd07845 11 KLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHP---NIVELKEVVVGKHLDSIFLVM 87 (309)
T ss_pred EeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCC---CCcceEEEEecCCCCeEEEEE
Confidence 4556788888899998863 237888876521 122345788888887542 233444332111 24679999
Q ss_pred ecccC
Q 022304 98 EFIEF 102 (299)
Q Consensus 98 e~l~G 102 (299)
|+.++
T Consensus 88 e~~~~ 92 (309)
T cd07845 88 EYCEQ 92 (309)
T ss_pred ecCCC
Confidence 99876
No 320
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=97.34 E-value=0.0029 Score=54.20 Aligned_cols=78 Identities=26% Similarity=0.154 Sum_probs=49.2
Q ss_pred eeeeeeeCCccccceEEEEeC-Cc----cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCccceeecccCCCceE
Q 022304 24 ITKICPVGGGCINLASRYGTD-AG----SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSY 94 (299)
Q Consensus 24 ~~~~~~~~~G~~n~~y~v~~~-~g----~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~ 94 (299)
+...+.++.|....+|++... .+ .+.+|...... ...+..|...++.+.. ..+.+++..... .+..+
T Consensus 7 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~ 82 (268)
T cd05063 7 ITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSH---HNIIRLEGVVTK-FKPAM 82 (268)
T ss_pred ceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCC---CCeeEEEEEEcc-CCCcE
Confidence 344567888888899998753 22 57788765421 2335567766666532 234555544332 46789
Q ss_pred EEEecccCCCC
Q 022304 95 IIMEFIEFGSS 105 (299)
Q Consensus 95 ~v~e~l~G~~~ 105 (299)
++||+++|..+
T Consensus 83 lv~e~~~~~~L 93 (268)
T cd05063 83 IITEYMENGAL 93 (268)
T ss_pred EEEEcCCCCCH
Confidence 99999988744
No 321
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=97.33 E-value=0.0028 Score=53.90 Aligned_cols=72 Identities=18% Similarity=0.098 Sum_probs=44.6
Q ss_pred eeCCccccceEEEEe--CC---ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEec
Q 022304 29 PVGGGCINLASRYGT--DA---GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 99 (299)
Q Consensus 29 ~~~~G~~n~~y~v~~--~~---g~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~ 99 (299)
.+|.|..+.+|+... .+ ..+++|...... ...+..|...++.+.. ..+.+++.... ....+++|++
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h---~~iv~~~~~~~--~~~~~~v~e~ 76 (257)
T cd05060 2 ELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDH---PCIVRLIGVCK--GEPLMLVMEL 76 (257)
T ss_pred ccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCC---CCeeeEEEEEc--CCceEEEEEe
Confidence 467777788888643 22 368889876432 1235567777766642 23444554432 3467999999
Q ss_pred ccCCCC
Q 022304 100 IEFGSS 105 (299)
Q Consensus 100 l~G~~~ 105 (299)
++|.++
T Consensus 77 ~~~~~L 82 (257)
T cd05060 77 APLGPL 82 (257)
T ss_pred CCCCcH
Confidence 988643
No 322
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=97.33 E-value=0.0039 Score=53.30 Aligned_cols=76 Identities=20% Similarity=0.069 Sum_probs=46.1
Q ss_pred eeeeCCccccceEEEEeCC-c-cEEEEecCCC-----C---cchHHHHHHHHHHHHhcCCCCCccceeecccC-CCceEE
Q 022304 27 ICPVGGGCINLASRYGTDA-G-SFFVKTNRSI-----G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALP-TGGSYI 95 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~~~-g-~~vlK~~~~~-----~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~-~~~~~~ 95 (299)
.+.++.|..+.+|+....+ + .+.+|..... . ...+..|+..++.+.. -.+++.+...... ....++
T Consensus 7 ~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h---~~i~~~~~~~~~~~~~~~~~ 83 (265)
T cd06652 7 GKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLH---ERIVQYYGCLRDPMERTLSI 83 (265)
T ss_pred eeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCC---CCeeeEEeEeccCCCceEEE
Confidence 4567777778899987533 3 7888865321 1 1245668888877743 2344444432221 245778
Q ss_pred EEecccCCCC
Q 022304 96 IMEFIEFGSS 105 (299)
Q Consensus 96 v~e~l~G~~~ 105 (299)
++++++|..+
T Consensus 84 v~e~~~~~~L 93 (265)
T cd06652 84 FMEHMPGGSI 93 (265)
T ss_pred EEEecCCCcH
Confidence 9999988743
No 323
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=97.33 E-value=0.0018 Score=55.85 Aligned_cols=72 Identities=14% Similarity=0.060 Sum_probs=43.2
Q ss_pred eCCccccceEEEEeC-Cc-cEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEeccc
Q 022304 30 VGGGCINLASRYGTD-AG-SFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE 101 (299)
Q Consensus 30 ~~~G~~n~~y~v~~~-~g-~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~ 101 (299)
++.|..+.||++... .| .|.+|..... ....+..|..+++.++. -.+++.+..... .+..++++++++
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~---~~i~~~~~~~~~-~~~~~lv~e~~~ 76 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSS---RFIVSLAYAFET-KDDLCLVMTLMN 76 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCC---CCEeeeeeEEec-CCeEEEEEecCC
Confidence 356667889998753 34 7888876531 12233467777776642 122333322222 467899999999
Q ss_pred CCCC
Q 022304 102 FGSS 105 (299)
Q Consensus 102 G~~~ 105 (299)
|..+
T Consensus 77 ~~~L 80 (277)
T cd05577 77 GGDL 80 (277)
T ss_pred CCcH
Confidence 8644
No 324
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=97.33 E-value=0.003 Score=53.76 Aligned_cols=72 Identities=15% Similarity=0.120 Sum_probs=44.1
Q ss_pred eeCCccccceEEEEe----CCccEEEEecCCCC-----cchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEec
Q 022304 29 PVGGGCINLASRYGT----DAGSFFVKTNRSIG-----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 99 (299)
Q Consensus 29 ~~~~G~~n~~y~v~~----~~g~~vlK~~~~~~-----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~ 99 (299)
.++.|..+.||+... .+..+.+|+..... ...+..|...++.+.. ..+.+++.... ....+++|++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~--~~~~~lv~e~ 76 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDN---PYIVRMIGICE--AESWMLVMEL 76 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCC---CCcceEEEEEc--CCCcEEEEec
Confidence 467787889998642 22378889875321 1335566766666632 23444554432 3466899999
Q ss_pred ccCCCC
Q 022304 100 IEFGSS 105 (299)
Q Consensus 100 l~G~~~ 105 (299)
.++.++
T Consensus 77 ~~~~~L 82 (257)
T cd05116 77 AELGPL 82 (257)
T ss_pred CCCCcH
Confidence 987644
No 325
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=97.33 E-value=0.0044 Score=55.15 Aligned_cols=76 Identities=16% Similarity=0.134 Sum_probs=49.2
Q ss_pred eeeeCCccccceEEEEeCC---------ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCccceeecccCCCce
Q 022304 27 ICPVGGGCINLASRYGTDA---------GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGS 93 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~~~---------g~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~ 93 (299)
...++.|..+.+|++...+ ..+.+|...... ...+..|..+++.+..+ -.+.+++..... .+..
T Consensus 17 ~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h--~~iv~~~~~~~~-~~~~ 93 (334)
T cd05100 17 GKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKH--KNIINLLGACTQ-DGPL 93 (334)
T ss_pred cceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCC--CCeeeeeEEEcc-CCce
Confidence 4678888889999986311 157888775321 23466788888877544 134445544332 4678
Q ss_pred EEEEecccCCCC
Q 022304 94 YIIMEFIEFGSS 105 (299)
Q Consensus 94 ~~v~e~l~G~~~ 105 (299)
+++++|++|..+
T Consensus 94 ~lv~e~~~~g~L 105 (334)
T cd05100 94 YVLVEYASKGNL 105 (334)
T ss_pred EEEEecCCCCcH
Confidence 999999988643
No 326
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=97.33 E-value=0.0023 Score=55.55 Aligned_cols=75 Identities=17% Similarity=0.162 Sum_probs=47.1
Q ss_pred eeeeCCccccceEEEEeC-------CccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEE
Q 022304 27 ICPVGGGCINLASRYGTD-------AGSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI 95 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~~-------~g~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~ 95 (299)
.+.++.|..+.||+.... ...+.+|...... ...+..|..+++.+.. -.+++++..... .+..++
T Consensus 11 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~---~~i~~~~~~~~~-~~~~~l 86 (288)
T cd05061 11 LRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTC---HHVVRLLGVVSK-GQPTLV 86 (288)
T ss_pred eeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCC---CCeeeEEEEEcC-CCCcEE
Confidence 467888888999987532 1268888765321 1223456666665532 245666654332 457899
Q ss_pred EEecccCCCC
Q 022304 96 IMEFIEFGSS 105 (299)
Q Consensus 96 v~e~l~G~~~ 105 (299)
+|||++|.++
T Consensus 87 v~e~~~~g~L 96 (288)
T cd05061 87 VMELMAHGDL 96 (288)
T ss_pred EEeCCCCCCH
Confidence 9999998754
No 327
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=97.33 E-value=0.00018 Score=71.35 Aligned_cols=131 Identities=17% Similarity=0.220 Sum_probs=77.4
Q ss_pred eeeCCccccceEEEEeCC-c-cEEEEecCC------CCcchHHHHHHHHHHHHhcCCCCCccce-eecccCCCceEEEEe
Q 022304 28 CPVGGGCINLASRYGTDA-G-SFFVKTNRS------IGPSMFEGEALGLGAMYETRTIRAPRPF-KVGALPTGGSYIIME 98 (299)
Q Consensus 28 ~~~~~G~~n~~y~v~~~~-g-~~vlK~~~~------~~~~~~~~E~~~l~~L~~~~~~~vP~~~-~~~~~~~~~~~~v~e 98 (299)
.-||.|..+.|..|.-.. + -|..|+-.. ..-+.+..|.+++.+-.. --+..+. ++.+ +..-|+||+
T Consensus 81 KvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns---~Wiv~LhyAFQD--~~~LYlVMd 155 (1317)
T KOG0612|consen 81 KVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNS---EWIVQLHYAFQD--ERYLYLVMD 155 (1317)
T ss_pred HHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCc---HHHHHHHHHhcC--ccceEEEEe
Confidence 346788888888887632 2 455565433 122556777777633211 1122222 2222 467899999
Q ss_pred cccCCCCCCcHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCCCCHHHHHHHhhhHHHHHHHHhhcCChHHHHH
Q 022304 99 FIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQR 178 (299)
Q Consensus 99 ~l~G~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (299)
|.+|+++ ...|.+ |+ + . .++|..||... +
T Consensus 156 Y~pGGDl-------ltLlSk----------~~-~-------~------pE~~ArFY~aE-i------------------- 184 (1317)
T KOG0612|consen 156 YMPGGDL-------LTLLSK----------FD-R-------L------PEDWARFYTAE-I------------------- 184 (1317)
T ss_pred cccCchH-------HHHHhh----------cC-C-------C------hHHHHHHHHHH-H-------------------
Confidence 9999733 222222 22 0 1 14777777532 1
Q ss_pred HHHHHHHHhccccCCCCCcceeccCCCCCCeeecCCCCeEEEccc
Q 022304 179 GHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA 223 (299)
Q Consensus 179 ~~~~~~~l~~~l~~~~~~~~liHgDl~~~Nvl~~~~~~~~iID~~ 223 (299)
+-.+..+. ..++||+|++|+|||+|..|.+-+=||.
T Consensus 185 ----VlAldslH-----~mgyVHRDiKPDNvLld~~GHikLADFG 220 (1317)
T KOG0612|consen 185 ----VLALDSLH-----SMGYVHRDIKPDNVLLDKSGHIKLADFG 220 (1317)
T ss_pred ----HHHHHHHH-----hccceeccCCcceeEecccCcEeeccch
Confidence 11111121 3689999999999999999988888875
No 328
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=97.33 E-value=0.0029 Score=54.74 Aligned_cols=27 Identities=30% Similarity=0.292 Sum_probs=23.8
Q ss_pred cceeccCCCCCCeeecCCCCeEEEccc
Q 022304 197 PCLLHGDLWSGNISSDKNGEPVILDPA 223 (299)
Q Consensus 197 ~~liHgDl~~~Nvl~~~~~~~~iID~~ 223 (299)
..++|+|+.|.||+++.++...|+|+.
T Consensus 116 ~~i~H~di~p~nili~~~~~~kl~dfg 142 (278)
T cd05606 116 RFVVYRDLKPANILLDEHGHVRISDLG 142 (278)
T ss_pred CCEEcCCCCHHHEEECCCCCEEEccCc
Confidence 469999999999999988878899974
No 329
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=97.32 E-value=0.0015 Score=59.93 Aligned_cols=76 Identities=16% Similarity=0.157 Sum_probs=51.4
Q ss_pred eeeeCCccccceEEEEeCC-------ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEE
Q 022304 27 ICPVGGGCINLASRYGTDA-------GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI 95 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~~~-------g~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~ 95 (299)
.+.+|.|..+.||++...+ ..+.+|...... ...+..|..++..|..+ -.+++++..... .+..++
T Consensus 42 ~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H--~niv~~~~~~~~-~~~~~i 118 (401)
T cd05107 42 GRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPH--LNIVNLLGACTK-GGPIYI 118 (401)
T ss_pred hhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCC--CCeEEEEEEEcc-CCCcEE
Confidence 4678999999999987421 268888876421 12456788888777533 234555554433 467899
Q ss_pred EEecccCCCC
Q 022304 96 IMEFIEFGSS 105 (299)
Q Consensus 96 v~e~l~G~~~ 105 (299)
+|||++|.++
T Consensus 119 v~E~~~~g~L 128 (401)
T cd05107 119 ITEYCRYGDL 128 (401)
T ss_pred EEeccCCCcH
Confidence 9999999765
No 330
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=97.32 E-value=0.0025 Score=56.52 Aligned_cols=73 Identities=12% Similarity=0.097 Sum_probs=44.3
Q ss_pred eeCCc--cccceEEEEeC-Cc-cEEEEecCCC-C----cchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEec
Q 022304 29 PVGGG--CINLASRYGTD-AG-SFFVKTNRSI-G----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 99 (299)
Q Consensus 29 ~~~~G--~~n~~y~v~~~-~g-~~vlK~~~~~-~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~ 99 (299)
.+|.| ....+|++... +| .+.+|..... . ...+..|..+++.+.. -.+.+++..... ++..++++|+
T Consensus 5 ~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h---pniv~~~~~~~~-~~~~~lv~e~ 80 (327)
T cd08227 5 VIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNH---PNIVPYRATFIA-DNELWVVTSF 80 (327)
T ss_pred hccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCC---CCeeeEEEEEEE-CCEEEEEEec
Confidence 35555 34578887663 34 6778876532 1 1346678877777743 234445544332 5678999999
Q ss_pred ccCCCC
Q 022304 100 IEFGSS 105 (299)
Q Consensus 100 l~G~~~ 105 (299)
++|..+
T Consensus 81 ~~~~~l 86 (327)
T cd08227 81 MAYGSA 86 (327)
T ss_pred cCCCcH
Confidence 998743
No 331
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=97.32 E-value=0.0015 Score=61.25 Aligned_cols=73 Identities=11% Similarity=0.012 Sum_probs=45.3
Q ss_pred eeeeCCccccceEEEEeCC--ccEEEEecCCC--CcchHHHHHHHHHHHHhcCC---CCCccceeecccCCCceEEEEec
Q 022304 27 ICPVGGGCINLASRYGTDA--GSFFVKTNRSI--GPSMFEGEALGLGAMYETRT---IRAPRPFKVGALPTGGSYIIMEF 99 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~~~--g~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~---~~vP~~~~~~~~~~~~~~~v~e~ 99 (299)
.+-+|.|....|.+..... ..+.+|+-... ....-..|+.+|+.|.++.+ --+-+.+.+--. .+..++|.|-
T Consensus 191 ~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~f-r~HlciVfEL 269 (586)
T KOG0667|consen 191 LEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYF-RNHLCIVFEL 269 (586)
T ss_pred EEEecccccceeEEEEecCCCcEEEEEeeccChHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeecccc-ccceeeeehh
Confidence 5778999889999987643 36788998753 22344679999999985421 223333333222 3455666654
Q ss_pred c
Q 022304 100 I 100 (299)
Q Consensus 100 l 100 (299)
+
T Consensus 270 L 270 (586)
T KOG0667|consen 270 L 270 (586)
T ss_pred h
Confidence 4
No 332
>PTZ00284 protein kinase; Provisional
Probab=97.32 E-value=0.0026 Score=59.58 Aligned_cols=77 Identities=13% Similarity=-0.038 Sum_probs=47.5
Q ss_pred eeeeeCCccccceEEEEeCC--ccEEEEecCCC--CcchHHHHHHHHHHHHhcCCC---CCccceeecccCCCceEEEEe
Q 022304 26 KICPVGGGCINLASRYGTDA--GSFFVKTNRSI--GPSMFEGEALGLGAMYETRTI---RAPRPFKVGALPTGGSYIIME 98 (299)
Q Consensus 26 ~~~~~~~G~~n~~y~v~~~~--g~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~~---~vP~~~~~~~~~~~~~~~v~e 98 (299)
-+..+|.|..+.||++.... ..+.+|+.... .......|..+++.+...... .+++++.+.....+..+++|+
T Consensus 133 i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~~~~~iv~~ 212 (467)
T PTZ00284 133 ILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNETGHMCIVMP 212 (467)
T ss_pred EEEEEEeccCEEEEEEEEcCCCeEEEEEEEecchhhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCCceEEEEEe
Confidence 34678889889999987632 36888987532 122356788888887653212 244444433221356788888
Q ss_pred cccC
Q 022304 99 FIEF 102 (299)
Q Consensus 99 ~l~G 102 (299)
+..+
T Consensus 213 ~~g~ 216 (467)
T PTZ00284 213 KYGP 216 (467)
T ss_pred ccCC
Confidence 7743
No 333
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=97.31 E-value=0.002 Score=55.36 Aligned_cols=74 Identities=15% Similarity=0.014 Sum_probs=47.2
Q ss_pred eeeCCccccceEEEEeC-C-ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEeccc
Q 022304 28 CPVGGGCINLASRYGTD-A-GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE 101 (299)
Q Consensus 28 ~~~~~G~~n~~y~v~~~-~-g~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~ 101 (299)
..++.|..+.+|+.... + ..+++|...... ...+..|..+++.+.. ..+.+++..... ....++++|+++
T Consensus 7 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~~v~e~~~ 82 (274)
T cd06609 7 ECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRS---PYITKYYGSFLK-GSKLWIIMEYCG 82 (274)
T ss_pred hhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCC---CCeeeeeEEEEE-CCeEEEEEEeeC
Confidence 45667777899998764 2 378899876421 1345678887777753 123334433222 457899999999
Q ss_pred CCCC
Q 022304 102 FGSS 105 (299)
Q Consensus 102 G~~~ 105 (299)
|..+
T Consensus 83 ~~~L 86 (274)
T cd06609 83 GGSC 86 (274)
T ss_pred CCcH
Confidence 8644
No 334
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=97.31 E-value=0.0011 Score=57.97 Aligned_cols=75 Identities=15% Similarity=0.178 Sum_probs=48.4
Q ss_pred eeeeCCccccceEEEEeC-Cc-cEEEEecCCC---CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEeccc
Q 022304 27 ICPVGGGCINLASRYGTD-AG-SFFVKTNRSI---GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE 101 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~~-~g-~~vlK~~~~~---~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~ 101 (299)
...++.|..+.+|+.... ++ .+++|..... ....+..|...++.+.. ..+++++..... ....+++||+++
T Consensus 25 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h---~~iv~~~~~~~~-~~~~~lv~e~~~ 100 (292)
T cd06657 25 FIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQH---ENVVEMYNSYLV-GDELWVVMEFLE 100 (292)
T ss_pred HHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCC---cchhheeeEEEe-CCEEEEEEecCC
Confidence 456888888899998763 34 7888876431 12345667777777653 234445443222 467899999999
Q ss_pred CCCC
Q 022304 102 FGSS 105 (299)
Q Consensus 102 G~~~ 105 (299)
|..+
T Consensus 101 ~~~L 104 (292)
T cd06657 101 GGAL 104 (292)
T ss_pred CCcH
Confidence 9744
No 335
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=97.31 E-value=0.0028 Score=54.58 Aligned_cols=74 Identities=14% Similarity=0.112 Sum_probs=45.8
Q ss_pred eeeeCCccccceEEEEeC--CccEEEEecCCC--Cc--chHHHHHHHHHHHHhcCCCCCccceeecccC-CCceEEEEec
Q 022304 27 ICPVGGGCINLASRYGTD--AGSFFVKTNRSI--GP--SMFEGEALGLGAMYETRTIRAPRPFKVGALP-TGGSYIIMEF 99 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~~--~g~~vlK~~~~~--~~--~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~-~~~~~~v~e~ 99 (299)
+..++.|..+.+|++... +..+.+|..... .. .....|...+..+..+ -.+++++...... .+..++++||
T Consensus 4 ~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h--~~i~~~~~~~~~~~~~~~~lv~e~ 81 (282)
T cd07831 4 LGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPH--PNILRLIEVLFDRKTGRLALVFEL 81 (282)
T ss_pred EeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCC--CCccceEEEEecCCCCcEEEEEec
Confidence 456787888899999863 237888876542 11 1123566666666543 2355566544331 2678999999
Q ss_pred ccC
Q 022304 100 IEF 102 (299)
Q Consensus 100 l~G 102 (299)
.+|
T Consensus 82 ~~~ 84 (282)
T cd07831 82 MDM 84 (282)
T ss_pred CCc
Confidence 975
No 336
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=97.31 E-value=0.0021 Score=56.08 Aligned_cols=75 Identities=19% Similarity=0.186 Sum_probs=45.9
Q ss_pred eeeCCccccceEEEEeC-Cc---cEEEEecCCC-C---cchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEec
Q 022304 28 CPVGGGCINLASRYGTD-AG---SFFVKTNRSI-G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 99 (299)
Q Consensus 28 ~~~~~G~~n~~y~v~~~-~g---~~vlK~~~~~-~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~ 99 (299)
+.++.|..+.+|++... ++ .+.+|..... . ...+..|...+..+..+ -.+.+++..... .+..++++++
T Consensus 8 ~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~h--p~iv~~~~~~~~-~~~~~lv~e~ 84 (297)
T cd05089 8 DVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHH--PNIINLLGACEN-RGYLYIAIEY 84 (297)
T ss_pred eeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCC--CchhheEEEEcc-CCcceEEEEe
Confidence 45777888899998753 23 2455655431 1 13356788878777543 123445544332 4678999999
Q ss_pred ccCCCC
Q 022304 100 IEFGSS 105 (299)
Q Consensus 100 l~G~~~ 105 (299)
.++.++
T Consensus 85 ~~~~~L 90 (297)
T cd05089 85 APYGNL 90 (297)
T ss_pred cCCCcH
Confidence 987633
No 337
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=97.30 E-value=0.0031 Score=54.99 Aligned_cols=76 Identities=17% Similarity=0.091 Sum_probs=50.5
Q ss_pred eeeeeCCccccceEEEEeCC-----------------c-cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCccce
Q 022304 26 KICPVGGGCINLASRYGTDA-----------------G-SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPF 83 (299)
Q Consensus 26 ~~~~~~~G~~n~~y~v~~~~-----------------g-~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~ 83 (299)
-.+.++.|..+.+|++...+ + .+.+|...... ...+..|+..++.+.. ..+++++
T Consensus 9 ~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~---~~i~~~~ 85 (296)
T cd05095 9 FKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKD---PNIIRLL 85 (296)
T ss_pred eeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCC---CCcceEE
Confidence 35678889889999875321 1 46778776421 2346678888887753 3455666
Q ss_pred eecccCCCceEEEEecccCCCC
Q 022304 84 KVGALPTGGSYIIMEFIEFGSS 105 (299)
Q Consensus 84 ~~~~~~~~~~~~v~e~l~G~~~ 105 (299)
..... .+..+++||+.+|..+
T Consensus 86 ~~~~~-~~~~~lv~e~~~~~~L 106 (296)
T cd05095 86 AVCIT-SDPLCMITEYMENGDL 106 (296)
T ss_pred EEEec-CCccEEEEEeCCCCcH
Confidence 55433 4678999999988644
No 338
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=97.30 E-value=0.0033 Score=53.24 Aligned_cols=76 Identities=16% Similarity=0.078 Sum_probs=48.9
Q ss_pred eeeeeCCccccceEEEEeC--CccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEe
Q 022304 26 KICPVGGGCINLASRYGTD--AGSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 98 (299)
Q Consensus 26 ~~~~~~~G~~n~~y~v~~~--~g~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e 98 (299)
-++.++.|..+.+|++... +..+++|..... ....+..|+..++.+.. -.+++++..... .+..++++|
T Consensus 4 ~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~---~~i~~~~~~~~~-~~~~~lv~e 79 (256)
T cd08220 4 KIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSH---PNIIEYYENFLE-DKALMIVME 79 (256)
T ss_pred EEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCC---CchhheeeeEec-CCEEEEEEe
Confidence 3567788888889987763 347888876532 12346678877777743 123444433222 467899999
Q ss_pred cccCCCC
Q 022304 99 FIEFGSS 105 (299)
Q Consensus 99 ~l~G~~~ 105 (299)
+++|..+
T Consensus 80 ~~~~~~L 86 (256)
T cd08220 80 YAPGGTL 86 (256)
T ss_pred cCCCCCH
Confidence 9999744
No 339
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=97.30 E-value=0.0025 Score=54.00 Aligned_cols=75 Identities=13% Similarity=-0.002 Sum_probs=47.6
Q ss_pred eeeeCCccccceEEEEeC-C-ccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEec
Q 022304 27 ICPVGGGCINLASRYGTD-A-GSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 99 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~~-~-g~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~ 99 (299)
.+.++.|..+.+|++... + ..|++|..... ....+..|...++.+.. ..+++++..... ....++++++
T Consensus 5 ~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~---~~i~~~~~~~~~-~~~~~~v~e~ 80 (256)
T cd08530 5 LKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNH---PNIISYKEAFLD-GNKLCIVMEY 80 (256)
T ss_pred eeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCC---CCchhhhhhhcc-CCEEEEEehh
Confidence 456777877889998763 3 37888876531 11234456666666642 245555544332 4688999999
Q ss_pred ccCCCC
Q 022304 100 IEFGSS 105 (299)
Q Consensus 100 l~G~~~ 105 (299)
.+|.++
T Consensus 81 ~~~~~L 86 (256)
T cd08530 81 APFGDL 86 (256)
T ss_pred cCCCCH
Confidence 988744
No 340
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=97.30 E-value=0.0011 Score=57.49 Aligned_cols=75 Identities=16% Similarity=0.027 Sum_probs=49.6
Q ss_pred eeeeCCccccceEEEEeC-Cc-cEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEecc
Q 022304 27 ICPVGGGCINLASRYGTD-AG-SFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI 100 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~~-~g-~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l 100 (299)
++.++.|..+.+|++... ++ .|++|+.... ....+..|.++++.+.. -.+++++..... .+..++++||+
T Consensus 10 ~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h---~~i~~~~~~~~~-~~~~~lv~e~~ 85 (284)
T cd06620 10 ISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRS---PYIVSFYGAFLN-ENNICMCMEFM 85 (284)
T ss_pred HHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCC---CCcceEeeeEec-CCEEEEEEecC
Confidence 456788888999998864 33 6777765432 12446678887777742 234555544332 46889999999
Q ss_pred cCCCC
Q 022304 101 EFGSS 105 (299)
Q Consensus 101 ~G~~~ 105 (299)
+|..+
T Consensus 86 ~~~~L 90 (284)
T cd06620 86 DCGSL 90 (284)
T ss_pred CCCCH
Confidence 98744
No 341
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=97.29 E-value=0.0027 Score=54.85 Aligned_cols=73 Identities=18% Similarity=0.161 Sum_probs=47.9
Q ss_pred eeeeeCCccccceEEEEeC--CccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEe
Q 022304 26 KICPVGGGCINLASRYGTD--AGSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 98 (299)
Q Consensus 26 ~~~~~~~G~~n~~y~v~~~--~g~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e 98 (299)
.+.+++.|..+.+|++... +..+++|..... ....+..|++.++.+.. ..+.+++..... .+..+++||
T Consensus 4 ~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h---~~i~~~~~~~~~-~~~~~~v~e 79 (284)
T cd07860 4 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH---PNIVKLLDVIHT-ENKLYLVFE 79 (284)
T ss_pred eeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCC---CCCcchhhhccc-CCcEEEEee
Confidence 3567888888899998763 337888876531 12346778888888853 234444443322 467899999
Q ss_pred cccC
Q 022304 99 FIEF 102 (299)
Q Consensus 99 ~l~G 102 (299)
++.+
T Consensus 80 ~~~~ 83 (284)
T cd07860 80 FLHQ 83 (284)
T ss_pred cccc
Confidence 9864
No 342
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=97.29 E-value=0.0035 Score=53.83 Aligned_cols=73 Identities=11% Similarity=0.067 Sum_probs=42.6
Q ss_pred eeCCccccceEEEEeCCc----cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEecc
Q 022304 29 PVGGGCINLASRYGTDAG----SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI 100 (299)
Q Consensus 29 ~~~~G~~n~~y~v~~~~g----~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l 100 (299)
.++.|..+.+|+....++ ..++|...... ...+..|...++.+.. -.+++.+..... ....+++|||+
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h---~~iv~~~~~~~~-~~~~~lv~e~~ 77 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQH---PNILQCLGQCVE-AIPYLLVFEYC 77 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCC---cchhheEEEecC-CCccEEEEecC
Confidence 467787888998754222 45667654321 2335556655555532 234445544332 45779999999
Q ss_pred cCCCC
Q 022304 101 EFGSS 105 (299)
Q Consensus 101 ~G~~~ 105 (299)
+|.++
T Consensus 78 ~~~~L 82 (268)
T cd05086 78 ELGDL 82 (268)
T ss_pred CCCcH
Confidence 88643
No 343
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=97.28 E-value=0.0022 Score=55.31 Aligned_cols=72 Identities=15% Similarity=0.070 Sum_probs=44.2
Q ss_pred eeeCCccccceEEEEeCC--ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEeccc
Q 022304 28 CPVGGGCINLASRYGTDA--GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE 101 (299)
Q Consensus 28 ~~~~~G~~n~~y~v~~~~--g~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~ 101 (299)
+.++.|..+.+|+....+ ..+++|...... ......|...+..+.++ ..+++++..... .+..+++||++.
T Consensus 5 ~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h--~~i~~~~~~~~~-~~~~~lv~e~~~ 81 (283)
T cd07830 5 KQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEH--PNIVKLKEVFRE-NDELYFVFEYME 81 (283)
T ss_pred eeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCC--CCchhHHHHhhc-CCcEEEEEecCC
Confidence 457778778999988743 368888765321 12233566666666433 234445544332 568899999994
Q ss_pred C
Q 022304 102 F 102 (299)
Q Consensus 102 G 102 (299)
|
T Consensus 82 ~ 82 (283)
T cd07830 82 G 82 (283)
T ss_pred C
Confidence 4
No 344
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=97.27 E-value=0.00087 Score=63.56 Aligned_cols=80 Identities=19% Similarity=0.092 Sum_probs=52.8
Q ss_pred ceeeeeeeCCccccceEEEE-eCCc-cEEEEecCC----CCcchHHHHHHHHHHHHhcCCCCCccceeecccC-----CC
Q 022304 23 HITKICPVGGGCINLASRYG-TDAG-SFFVKTNRS----IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALP-----TG 91 (299)
Q Consensus 23 ~~~~~~~~~~G~~n~~y~v~-~~~g-~~vlK~~~~----~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~-----~~ 91 (299)
..-.-+.+|.|..+.||+-. +..| .+.+|..+. ..++..-+|+++++.|. + -.+.+.++..++. ..
T Consensus 14 ~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLn-h--~NIVk~f~iee~~~~~~~~~ 90 (732)
T KOG4250|consen 14 LWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLN-H--PNIVKLFDIEETKFLGLVTR 90 (732)
T ss_pred ceeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcC-c--hhhhhhcccCCccccCcccc
Confidence 44455778889899999987 4555 677787764 23455678999999987 3 1222233322221 23
Q ss_pred ceEEEEecccCCCC
Q 022304 92 GSYIIMEFIEFGSS 105 (299)
Q Consensus 92 ~~~~v~e~l~G~~~ 105 (299)
.+.++|||+.|+.+
T Consensus 91 ~~vlvmEyC~gGsL 104 (732)
T KOG4250|consen 91 LPVLVMEYCSGGSL 104 (732)
T ss_pred cceEEEeecCCCcH
Confidence 67999999999854
No 345
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=97.26 E-value=0.0048 Score=53.20 Aligned_cols=78 Identities=15% Similarity=0.153 Sum_probs=50.0
Q ss_pred ceeeeeeeCCccccceEEEEeC-Cc-----cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCccceeecccCCCc
Q 022304 23 HITKICPVGGGCINLASRYGTD-AG-----SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGG 92 (299)
Q Consensus 23 ~~~~~~~~~~G~~n~~y~v~~~-~g-----~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~ 92 (299)
+..-.+.++.|..+.+|+.... .| .+.+|...... ...+..|+..+..+.. ..+.+++.... .+.
T Consensus 8 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~--~~~ 82 (279)
T cd05057 8 ELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDH---PHVVRLLGICL--SSQ 82 (279)
T ss_pred HcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCC---CCcceEEEEEe--cCc
Confidence 3444578888888999998752 22 47788765432 1345567777776632 23455555443 267
Q ss_pred eEEEEecccCCCC
Q 022304 93 SYIIMEFIEFGSS 105 (299)
Q Consensus 93 ~~~v~e~l~G~~~ 105 (299)
.++++++.+|..+
T Consensus 83 ~~~v~e~~~~g~L 95 (279)
T cd05057 83 VQLITQLMPLGCL 95 (279)
T ss_pred eEEEEecCCCCcH
Confidence 8999999988644
No 346
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=97.25 E-value=0.0018 Score=59.23 Aligned_cols=137 Identities=20% Similarity=0.225 Sum_probs=81.6
Q ss_pred eeeeeeCCccccceEEEEe-CCc-cEEEEecCC-----CCcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEE
Q 022304 25 TKICPVGGGCINLASRYGT-DAG-SFFVKTNRS-----IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM 97 (299)
Q Consensus 25 ~~~~~~~~G~~n~~y~v~~-~~g-~~vlK~~~~-----~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~ 97 (299)
..++.||.|..+.||+... ..| -|.+|--+- ...-...+|+.+|+.|.....+..-.++-.. . .+..|+|+
T Consensus 120 eki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~-~-~~siYlVF 197 (560)
T KOG0600|consen 120 EKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSK-L-SGSIYLVF 197 (560)
T ss_pred HHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEec-C-CceEEEEE
Confidence 3578899999999999875 344 355665442 2234467899999999653222222222221 1 47899999
Q ss_pred ecccCCCCCCcHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCCCCHHHHHHHhhhHHHHHHHHhhcCChHHHH
Q 022304 98 EFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQ 177 (299)
Q Consensus 98 e~l~G~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (299)
||.+-. + .-. ++. +. .. ... .++..
T Consensus 198 eYMdhD-L-------~GL---l~~-p~----vk---------------ft~--------~qIKc---------------- 222 (560)
T KOG0600|consen 198 EYMDHD-L-------SGL---LSS-PG----VK---------------FTE--------PQIKC---------------- 222 (560)
T ss_pred ecccch-h-------hhh---hcC-CC----cc---------------cCh--------HHHHH----------------
Confidence 999753 1 111 111 10 00 000 11221
Q ss_pred HHHHHHHHHhccccCCCCCcceeccCCCCCCeeecCCCCeEEEccc
Q 022304 178 RGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA 223 (299)
Q Consensus 178 ~~~~~~~~l~~~l~~~~~~~~liHgDl~~~Nvl~~~~~~~~iID~~ 223 (299)
.+.++++.+.... ...++|+|++..|||+|++|..-|=||.
T Consensus 223 ~mkQLl~Gl~~cH-----~~gvlHRDIK~SNiLidn~G~LKiaDFG 263 (560)
T KOG0600|consen 223 YMKQLLEGLEYCH-----SRGVLHRDIKGSNILIDNNGVLKIADFG 263 (560)
T ss_pred HHHHHHHHHHHHh-----hcCeeeccccccceEEcCCCCEEecccc
Confidence 2234444444322 4689999999999999999988898874
No 347
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=97.25 E-value=0.0036 Score=53.59 Aligned_cols=76 Identities=17% Similarity=0.009 Sum_probs=46.5
Q ss_pred eeeeCCccccceEEEEeC--CccEEEEecCCCC--------cchHHHHHHHHHHHHhcCCCCCccceeecccC-CCceEE
Q 022304 27 ICPVGGGCINLASRYGTD--AGSFFVKTNRSIG--------PSMFEGEALGLGAMYETRTIRAPRPFKVGALP-TGGSYI 95 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~~--~g~~vlK~~~~~~--------~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~-~~~~~~ 95 (299)
.+.++.|..+.+|++... +..+++|...... ...+..|+.+++.|... .+.+.+...... ....++
T Consensus 7 ~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~---~i~~~~~~~~~~~~~~~~l 83 (266)
T cd06651 7 GKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHE---RIVQYYGCLRDRAEKTLTI 83 (266)
T ss_pred cceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCC---CeeeEEEEEEcCCCCEEEE
Confidence 356778888899998763 3378888764210 12356788777777531 233333322211 356789
Q ss_pred EEecccCCCC
Q 022304 96 IMEFIEFGSS 105 (299)
Q Consensus 96 v~e~l~G~~~ 105 (299)
++++++|..+
T Consensus 84 ~~e~~~~~~L 93 (266)
T cd06651 84 FMEYMPGGSV 93 (266)
T ss_pred EEeCCCCCcH
Confidence 9999988644
No 348
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=97.25 E-value=0.0024 Score=54.68 Aligned_cols=73 Identities=25% Similarity=0.173 Sum_probs=44.6
Q ss_pred eeCCccccceEEEEeCC--------ccEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEE
Q 022304 29 PVGGGCINLASRYGTDA--------GSFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII 96 (299)
Q Consensus 29 ~~~~G~~n~~y~v~~~~--------g~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v 96 (299)
.++.|..+.||+++..+ ..+.+|..... ....+..|+..++.+.. ..+.+++..... .+..+++
T Consensus 2 ~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~~v 77 (269)
T cd05044 2 FLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNH---PNIVKLLGVCLL-NEPQYII 77 (269)
T ss_pred ccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCC---CCeeeEeeeecC-CCCeEEE
Confidence 35677778899877532 25777876432 12345567777766642 223344443322 4678999
Q ss_pred EecccCCCC
Q 022304 97 MEFIEFGSS 105 (299)
Q Consensus 97 ~e~l~G~~~ 105 (299)
|++++|.++
T Consensus 78 ~e~~~~~~L 86 (269)
T cd05044 78 MELMEGGDL 86 (269)
T ss_pred EeccCCCcH
Confidence 999998643
No 349
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=97.24 E-value=0.003 Score=54.75 Aligned_cols=74 Identities=14% Similarity=0.108 Sum_probs=46.4
Q ss_pred eeeeeCCccccceEEEEeCC--ccEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEec
Q 022304 26 KICPVGGGCINLASRYGTDA--GSFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 99 (299)
Q Consensus 26 ~~~~~~~G~~n~~y~v~~~~--g~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~ 99 (299)
..+.++.|..+.||++.... ..+.+|..... ....+..|...+..+..+ -.+++++..... ++..+++|++
T Consensus 8 ~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~--~~iv~~~~~~~~-~~~~~~~~e~ 84 (288)
T cd06616 8 DLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDC--PYIVKFYGALFR-EGDCWICMEL 84 (288)
T ss_pred HHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCC--CCEeeeeeEEec-CCcEEEEEec
Confidence 34567788888999987642 37888876532 123355677666666433 235555554332 5678899999
Q ss_pred ccC
Q 022304 100 IEF 102 (299)
Q Consensus 100 l~G 102 (299)
+.+
T Consensus 85 ~~~ 87 (288)
T cd06616 85 MDI 87 (288)
T ss_pred ccC
Confidence 765
No 350
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=97.24 E-value=0.0039 Score=62.83 Aligned_cols=77 Identities=18% Similarity=0.060 Sum_probs=49.7
Q ss_pred eeeeeCCccccceEEEEeCC-c-cEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCCccceeecccC-CCceEEEE
Q 022304 26 KICPVGGGCINLASRYGTDA-G-SFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP-TGGSYIIM 97 (299)
Q Consensus 26 ~~~~~~~G~~n~~y~v~~~~-g-~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~-~~~~~~v~ 97 (299)
-+..|+.|..+.||++.... + .+++|+.... ....+..|+.++..|.. ..+.+++...... ....|++|
T Consensus 17 Il~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~H---PNIVrl~d~f~de~~~~lyIVM 93 (1021)
T PTZ00266 17 VIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKH---KNIVRYIDRFLNKANQKLYILM 93 (1021)
T ss_pred EEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCC---CCcCeEEEEEEecCCCEEEEEE
Confidence 35778888889999998643 3 5677765421 12446678888888753 2344444322111 35689999
Q ss_pred ecccCCCC
Q 022304 98 EFIEFGSS 105 (299)
Q Consensus 98 e~l~G~~~ 105 (299)
||++|..+
T Consensus 94 EY~~gGSL 101 (1021)
T PTZ00266 94 EFCDAGDL 101 (1021)
T ss_pred eCCCCCcH
Confidence 99998744
No 351
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=97.23 E-value=0.0029 Score=54.74 Aligned_cols=75 Identities=16% Similarity=0.069 Sum_probs=47.8
Q ss_pred eeeeCCccccceEEEEeC--CccEEEEecCCC-C---cchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEecc
Q 022304 27 ICPVGGGCINLASRYGTD--AGSFFVKTNRSI-G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI 100 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~~--~g~~vlK~~~~~-~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l 100 (299)
++.++.|..+.+|++... +..+++|..... . ...+..|...++.+.. -.+++.+..... .+..+++||++
T Consensus 6 ~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~---~~i~~~~~~~~~-~~~~~lv~e~~ 81 (286)
T cd06622 6 LDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVS---PYIVDFYGAFFI-EGAVYMCMEYM 81 (286)
T ss_pred hhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCC---CcHHhhhhheec-CCeEEEEEeec
Confidence 356778888899998874 337888866431 1 1335567777766632 233444443322 56889999999
Q ss_pred cCCCC
Q 022304 101 EFGSS 105 (299)
Q Consensus 101 ~G~~~ 105 (299)
+|..+
T Consensus 82 ~~~~l 86 (286)
T cd06622 82 DAGSL 86 (286)
T ss_pred CCCCH
Confidence 99744
No 352
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=97.21 E-value=0.0036 Score=53.44 Aligned_cols=74 Identities=12% Similarity=0.087 Sum_probs=47.9
Q ss_pred eeeCCccccceEEEEe--CCccEEEEecCCCC---------cchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEE
Q 022304 28 CPVGGGCINLASRYGT--DAGSFFVKTNRSIG---------PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII 96 (299)
Q Consensus 28 ~~~~~G~~n~~y~v~~--~~g~~vlK~~~~~~---------~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v 96 (299)
+.++.|..+.+|++.. ++..+++|...... ...+..|+..++.+... .+++++..... .+..+++
T Consensus 6 ~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~---~iv~~~~~~~~-~~~~~~v 81 (268)
T cd06630 6 QQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHP---HIIRMLGATCE-DSHFNLF 81 (268)
T ss_pred ceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCC---ceehhhceecc-CCeEEEE
Confidence 4577888889999875 23378888775311 13456788888777532 33444443322 4678999
Q ss_pred EecccCCCC
Q 022304 97 MEFIEFGSS 105 (299)
Q Consensus 97 ~e~l~G~~~ 105 (299)
+++.+|..+
T Consensus 82 ~e~~~~~~L 90 (268)
T cd06630 82 VEWMAGGSV 90 (268)
T ss_pred EeccCCCcH
Confidence 999998744
No 353
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=97.20 E-value=0.003 Score=55.12 Aligned_cols=75 Identities=12% Similarity=0.057 Sum_probs=44.8
Q ss_pred eeeeeeCCccccceEEEEeCC--ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEe
Q 022304 25 TKICPVGGGCINLASRYGTDA--GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 98 (299)
Q Consensus 25 ~~~~~~~~G~~n~~y~v~~~~--g~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e 98 (299)
.-.+.++.|..+.+|++...+ ..+++|...... ...+..|...+..+..+ -.+++.+..... ....+++|+
T Consensus 18 ~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~--~~i~~~~~~~~~-~~~~~~v~e 94 (296)
T cd06618 18 ENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDC--PYIVKCYGYFIT-DSDVFICME 94 (296)
T ss_pred eeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCC--CchHhhheeeec-CCeEEEEee
Confidence 345788888888999998763 378888875321 11223344444333322 234555544332 467899999
Q ss_pred cccC
Q 022304 99 FIEF 102 (299)
Q Consensus 99 ~l~G 102 (299)
++.+
T Consensus 95 ~~~~ 98 (296)
T cd06618 95 LMST 98 (296)
T ss_pred ccCc
Confidence 8754
No 354
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=97.18 E-value=0.0042 Score=55.80 Aligned_cols=75 Identities=12% Similarity=0.109 Sum_probs=46.1
Q ss_pred eeeeeeCCccccceEEEEeC--CccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCCccceeecccC-----CCc
Q 022304 25 TKICPVGGGCINLASRYGTD--AGSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP-----TGG 92 (299)
Q Consensus 25 ~~~~~~~~G~~n~~y~v~~~--~g~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~-----~~~ 92 (299)
..++.++.|..+.||++... +..+++|..... ....+..|..+++.+.. ..+.+++...... ...
T Consensus 19 ~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h---~~iv~~~~~~~~~~~~~~~~~ 95 (353)
T cd07850 19 QNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNH---KNIIGLLNVFTPQKSLEEFQD 95 (353)
T ss_pred EEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCC---CCCcceeeeeccCCCccccCc
Confidence 34678888888999998763 337899986531 11234567777776643 2233444321110 135
Q ss_pred eEEEEecccC
Q 022304 93 SYIIMEFIEF 102 (299)
Q Consensus 93 ~~~v~e~l~G 102 (299)
.+++||+++|
T Consensus 96 ~~lv~e~~~~ 105 (353)
T cd07850 96 VYLVMELMDA 105 (353)
T ss_pred EEEEEeccCC
Confidence 6999999976
No 355
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=97.18 E-value=0.0045 Score=54.15 Aligned_cols=76 Identities=13% Similarity=0.144 Sum_probs=48.1
Q ss_pred eeeeeCCccccceEEEEeC--CccEEEEecCCC---CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEecc
Q 022304 26 KICPVGGGCINLASRYGTD--AGSFFVKTNRSI---GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI 100 (299)
Q Consensus 26 ~~~~~~~G~~n~~y~v~~~--~g~~vlK~~~~~---~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l 100 (299)
....++.|..+.+|++... +..+++|..... ....+..|...++.+.. -.+++++..... .+..++++|++
T Consensus 25 ~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h---p~i~~~~~~~~~-~~~~~iv~e~~ 100 (297)
T cd06659 25 NYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQH---QNVVEMYKSYLV-GEELWVLMEFL 100 (297)
T ss_pred hhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCC---Cchhhhhhheee-CCeEEEEEecC
Confidence 3457888888899998763 337888886431 22345567766665532 234444443222 46789999999
Q ss_pred cCCCC
Q 022304 101 EFGSS 105 (299)
Q Consensus 101 ~G~~~ 105 (299)
+|..+
T Consensus 101 ~~~~L 105 (297)
T cd06659 101 QGGAL 105 (297)
T ss_pred CCCCH
Confidence 88643
No 356
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=97.17 E-value=0.0041 Score=53.42 Aligned_cols=131 Identities=19% Similarity=0.210 Sum_probs=75.3
Q ss_pred eeeeeCCccccceEEEEeC-Cc-cEEEEecCCCC------cchHHHHHHHHHHHHhcCCCCCccce---eecccCCCceE
Q 022304 26 KICPVGGGCINLASRYGTD-AG-SFFVKTNRSIG------PSMFEGEALGLGAMYETRTIRAPRPF---KVGALPTGGSY 94 (299)
Q Consensus 26 ~~~~~~~G~~n~~y~v~~~-~g-~~vlK~~~~~~------~~~~~~E~~~l~~L~~~~~~~vP~~~---~~~~~~~~~~~ 94 (299)
.+..+|.|....|-.|+.. .| -|.+|+-.... -.....|..+|+.+. .|-++ .+..+ .+.-|
T Consensus 48 ~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~------~PFlv~l~~t~~d-~~~ly 120 (355)
T KOG0616|consen 48 RLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVS------HPFLVKLYGTFKD-NSNLY 120 (355)
T ss_pred heeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhcc------CceeEEEEEeecc-CCeEE
Confidence 3566788888888888764 33 56667765321 122234554544442 23333 22222 56889
Q ss_pred EEEecccCCCCCCcHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCCCCHHHHHHHhhhHHHHHHHHhhcCChH
Q 022304 95 IIMEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDST 174 (299)
Q Consensus 95 ~v~e~l~G~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (299)
|+|++++|+. +=..|++.++.+. .-..||+.+
T Consensus 121 mvmeyv~GGE-------lFS~Lrk~~rF~e------------------------~~arFYAAe----------------- 152 (355)
T KOG0616|consen 121 MVMEYVPGGE-------LFSYLRKSGRFSE------------------------PHARFYAAE----------------- 152 (355)
T ss_pred EEEeccCCcc-------HHHHHHhcCCCCc------------------------hhHHHHHHH-----------------
Confidence 9999999973 3333333322221 112344321
Q ss_pred HHHHHHHHHHHHhccccCCCCCcceeccCCCCCCeeecCCCCeEEEccc
Q 022304 175 IYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA 223 (299)
Q Consensus 175 ~~~~~~~~~~~l~~~l~~~~~~~~liHgDl~~~Nvl~~~~~~~~iID~~ 223 (299)
++-.+. ++. ...++.+|++|.|+|+|.+|-.-|+||.
T Consensus 153 -------ivlAle-ylH----~~~iiYRDLKPENiLlD~~G~iKitDFG 189 (355)
T KOG0616|consen 153 -------IVLALE-YLH----SLDIIYRDLKPENLLLDQNGHIKITDFG 189 (355)
T ss_pred -------HHHHHH-HHH----hcCeeeccCChHHeeeccCCcEEEEecc
Confidence 111112 222 3589999999999999999988999974
No 357
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=97.17 E-value=0.0067 Score=52.75 Aligned_cols=73 Identities=19% Similarity=0.185 Sum_probs=49.2
Q ss_pred eeeeeCCccccceEEEEeC-Cc-cEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEe
Q 022304 26 KICPVGGGCINLASRYGTD-AG-SFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 98 (299)
Q Consensus 26 ~~~~~~~G~~n~~y~v~~~-~g-~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e 98 (299)
-...++.|..+.+|++... ++ .+++|..... ....+..|+..++.+.. -.+++++..... ....+++||
T Consensus 6 ~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~lv~e 81 (294)
T PLN00009 6 KVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH---GNIVRLQDVVHS-EKRLYLVFE 81 (294)
T ss_pred EEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccC---CCEeeEEEEEec-CCeEEEEEe
Confidence 3467788888899998764 33 7899977531 12346678888887743 245556655433 468899999
Q ss_pred cccC
Q 022304 99 FIEF 102 (299)
Q Consensus 99 ~l~G 102 (299)
|+++
T Consensus 82 ~~~~ 85 (294)
T PLN00009 82 YLDL 85 (294)
T ss_pred cccc
Confidence 9864
No 358
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=97.16 E-value=0.0071 Score=51.78 Aligned_cols=73 Identities=15% Similarity=0.074 Sum_probs=42.6
Q ss_pred eeCCccccceEEEEeCC-------------c-cEEEEecCCCCc---chHHHHHHHHHHHHhcCCCCCccceeecccCCC
Q 022304 29 PVGGGCINLASRYGTDA-------------G-SFFVKTNRSIGP---SMFEGEALGLGAMYETRTIRAPRPFKVGALPTG 91 (299)
Q Consensus 29 ~~~~G~~n~~y~v~~~~-------------g-~~vlK~~~~~~~---~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~ 91 (299)
.+|.|..+.+|+.+... . .+++|....... ..+..|...+..+.. -.+++++..... ..
T Consensus 2 ~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~h---p~iv~~~~~~~~-~~ 77 (262)
T cd05077 2 HLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSH---KHIVLLYGVCVR-DV 77 (262)
T ss_pred ccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCC---CCEeeEEEEEec-CC
Confidence 56777778888876321 1 467787654222 234445555554432 234555544332 45
Q ss_pred ceEEEEecccCCCC
Q 022304 92 GSYIIMEFIEFGSS 105 (299)
Q Consensus 92 ~~~~v~e~l~G~~~ 105 (299)
..+++||++++..+
T Consensus 78 ~~~lv~e~~~~~~l 91 (262)
T cd05077 78 ENIMVEEFVEFGPL 91 (262)
T ss_pred CCEEEEecccCCCH
Confidence 78999999998743
No 359
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=97.16 E-value=0.0029 Score=54.16 Aligned_cols=76 Identities=18% Similarity=0.071 Sum_probs=47.2
Q ss_pred eeeeCCccccceEEEEeCC-c-cEEEEecCCC--------CcchHHHHHHHHHHHHhcCCCCCccceeecccC-CCceEE
Q 022304 27 ICPVGGGCINLASRYGTDA-G-SFFVKTNRSI--------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP-TGGSYI 95 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~~~-g-~~vlK~~~~~--------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~-~~~~~~ 95 (299)
.+.++.|..+.+|+..... + .+.+|..... ....+..|+.+++.+... .+.+++...... .+..++
T Consensus 7 ~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~---~i~~~~~~~~~~~~~~~~~ 83 (264)
T cd06653 7 GKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHD---RIVQYYGCLRDPEEKKLSI 83 (264)
T ss_pred eeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCC---CcceEEEEEEcCCCCEEEE
Confidence 3567778788999987532 3 7888875321 113456788888877532 234445432221 346789
Q ss_pred EEecccCCCC
Q 022304 96 IMEFIEFGSS 105 (299)
Q Consensus 96 v~e~l~G~~~ 105 (299)
++|+.+|..+
T Consensus 84 v~e~~~~~~L 93 (264)
T cd06653 84 FVEYMPGGSI 93 (264)
T ss_pred EEEeCCCCcH
Confidence 9999988643
No 360
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=97.16 E-value=0.011 Score=50.63 Aligned_cols=74 Identities=14% Similarity=-0.004 Sum_probs=48.2
Q ss_pred eeeCCccccceEEEEeC-Cc-cEEEEecCCCC---cchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEecccC
Q 022304 28 CPVGGGCINLASRYGTD-AG-SFFVKTNRSIG---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEF 102 (299)
Q Consensus 28 ~~~~~G~~n~~y~v~~~-~g-~~vlK~~~~~~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G 102 (299)
..++.|..+.+|+.... ++ .+.+|...... ...+..|+..++.+.. ..+.+++..... .+..++++|+++|
T Consensus 14 ~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h---~~iv~~~~~~~~-~~~~~lv~e~~~~ 89 (268)
T cd06624 14 VVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKH---RNIVQYLGSDSE-NGFFKIFMEQVPG 89 (268)
T ss_pred EEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCC---CCeeeeeeeecc-CCEEEEEEecCCC
Confidence 46777878899999754 33 68888765321 2346678777776643 233445544332 4678999999998
Q ss_pred CCC
Q 022304 103 GSS 105 (299)
Q Consensus 103 ~~~ 105 (299)
..+
T Consensus 90 ~~L 92 (268)
T cd06624 90 GSL 92 (268)
T ss_pred CCH
Confidence 744
No 361
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=97.15 E-value=0.0029 Score=56.37 Aligned_cols=73 Identities=12% Similarity=0.050 Sum_probs=44.6
Q ss_pred eeeeCCccccceEEEEeC--CccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCCccceee---cccCCCceEEE
Q 022304 27 ICPVGGGCINLASRYGTD--AGSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKV---GALPTGGSYII 96 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~~--~g~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~---~~~~~~~~~~v 96 (299)
.+.++.|..+.+|++... +..|++|..... ....+..|...++.+... .+++++.. ........+++
T Consensus 10 ~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~---~iv~~~~~~~~~~~~~~~~~lv 86 (334)
T cd07855 10 IENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHD---NIIAIRDILRPPGADFKDVYVV 86 (334)
T ss_pred eeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCC---CccCHHHhccccCCCCceEEEE
Confidence 456787877889998764 338888876531 123355688888877632 23333322 11113467999
Q ss_pred EecccC
Q 022304 97 MEFIEF 102 (299)
Q Consensus 97 ~e~l~G 102 (299)
++|+.|
T Consensus 87 ~e~~~~ 92 (334)
T cd07855 87 MDLMES 92 (334)
T ss_pred Eehhhh
Confidence 999865
No 362
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=97.15 E-value=0.0068 Score=53.18 Aligned_cols=73 Identities=11% Similarity=0.038 Sum_probs=47.2
Q ss_pred eeeeCCccccceEEEEeCC----ccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCccceeecccC-CCceEE
Q 022304 27 ICPVGGGCINLASRYGTDA----GSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP-TGGSYI 95 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~~~----g~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~-~~~~~~ 95 (299)
+..++.|..+.+|++.... ..|++|..... ....+..|+.++..+.. ..+.+++...... ....++
T Consensus 5 ~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~~~~~~~~l 81 (316)
T cd07842 5 EGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKH---ENVVSLVEVFLEHADKSVYL 81 (316)
T ss_pred EEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCC---CCccceEEEEeCCCCceEEE
Confidence 3458888888999998743 37999987641 12345678877777753 2334444433221 257899
Q ss_pred EEecccC
Q 022304 96 IMEFIEF 102 (299)
Q Consensus 96 v~e~l~G 102 (299)
+||++++
T Consensus 82 v~e~~~~ 88 (316)
T cd07842 82 LFDYAEH 88 (316)
T ss_pred EEeCCCc
Confidence 9999876
No 363
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=97.15 E-value=0.0062 Score=53.21 Aligned_cols=146 Identities=18% Similarity=0.163 Sum_probs=85.3
Q ss_pred eeeeCCccccceEEEEeCCc--cEEEEecC-C----CCcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEec
Q 022304 27 ICPVGGGCINLASRYGTDAG--SFFVKTNR-S----IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 99 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~~~g--~~vlK~~~-~----~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~ 99 (299)
+.+|+.|.+.-|||...... -+.+|.-. . ..+-.--+|+.+|........+.|=+++--.. -+..|+||+|
T Consensus 81 lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~--~d~iy~VMe~ 158 (419)
T KOG0663|consen 81 LNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSN--MDKIYIVMEY 158 (419)
T ss_pred HhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccc--cceeeeeHHH
Confidence 56788999999999986432 34555443 2 12222357888776665322223333332221 3578999999
Q ss_pred ccCCCCCCcHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCCCCHHHHHHHhhhHHHHHHHHhhcCChHHHHHH
Q 022304 100 IEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRG 179 (299)
Q Consensus 100 l~G~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (299)
++-. +... ||..+.+ |.. . .. .-..
T Consensus 159 ~EhD--------Lksl---~d~m~q~---F~~-----------------~--------ev----------------K~L~ 183 (419)
T KOG0663|consen 159 VEHD--------LKSL---METMKQP---FLP-----------------G--------EV----------------KTLM 183 (419)
T ss_pred HHhh--------HHHH---HHhccCC---Cch-----------------H--------HH----------------HHHH
Confidence 9752 2222 3333321 210 0 00 1122
Q ss_pred HHHHHHHhccccCCCCCcceeccCCCCCCeeecCCCCeEEEccc-c-ccCCchhhhh
Q 022304 180 HRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA-C-YYGHNEAEFG 234 (299)
Q Consensus 180 ~~~~~~l~~~l~~~~~~~~liHgDl~~~Nvl~~~~~~~~iID~~-~-~~g~~~~Dla 234 (299)
.+++..++.+. ..-++|+||++.|+|..+.|..-|-||. + .||.|.--++
T Consensus 184 ~QlL~glk~lH-----~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp~k~~T 235 (419)
T KOG0663|consen 184 LQLLRGLKHLH-----DNWILHRDLKTSNLLLSHKGILKIADFGLAREYGSPLKPYT 235 (419)
T ss_pred HHHHHHHHHHh-----hceeEecccchhheeeccCCcEEecccchhhhhcCCcccCc
Confidence 33444444332 3579999999999999988888999985 5 5999944433
No 364
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=97.15 E-value=0.0042 Score=58.70 Aligned_cols=27 Identities=30% Similarity=0.246 Sum_probs=24.2
Q ss_pred cceeccCCCCCCeeecCCCCeEEEccc
Q 022304 197 PCLLHGDLWSGNISSDKNGEPVILDPA 223 (299)
Q Consensus 197 ~~liHgDl~~~Nvl~~~~~~~~iID~~ 223 (299)
..++|+|++|.|||++.++.+.|+|+.
T Consensus 162 ~~IiHrDLKP~NILl~~~~~vkL~DFG 188 (496)
T PTZ00283 162 KHMIHRDIKSANILLCSNGLVKLGDFG 188 (496)
T ss_pred CCEecCCCCHHHEEEeCCCCEEEEecc
Confidence 479999999999999988888899974
No 365
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=97.14 E-value=0.0038 Score=54.20 Aligned_cols=76 Identities=16% Similarity=0.093 Sum_probs=49.2
Q ss_pred eeeeeCCccccceEEEEeCC------c-cEEEEecCCCC---cchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEE
Q 022304 26 KICPVGGGCINLASRYGTDA------G-SFFVKTNRSIG---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI 95 (299)
Q Consensus 26 ~~~~~~~G~~n~~y~v~~~~------g-~~vlK~~~~~~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~ 95 (299)
-...++.|..+.+|++...+ + .+.+|...... ...+..|.+.++.+.. -.+++++..... .+..++
T Consensus 9 ~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~l 84 (288)
T cd05093 9 LKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQH---EHIVKFYGVCVE-GDPLIM 84 (288)
T ss_pred eccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCC---CCcceEEEEEec-CCccEE
Confidence 34567888888999987521 2 46778765422 2346678888877743 234555554433 467899
Q ss_pred EEecccCCCC
Q 022304 96 IMEFIEFGSS 105 (299)
Q Consensus 96 v~e~l~G~~~ 105 (299)
++|+.+|..+
T Consensus 85 v~e~~~~~~L 94 (288)
T cd05093 85 VFEYMKHGDL 94 (288)
T ss_pred EEEcCCCCCH
Confidence 9999998744
No 366
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=97.14 E-value=0.011 Score=50.54 Aligned_cols=74 Identities=18% Similarity=0.071 Sum_probs=46.9
Q ss_pred eeeeCCccccceEEEEeCC-----ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEE
Q 022304 27 ICPVGGGCINLASRYGTDA-----GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM 97 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~~~-----g~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~ 97 (299)
.+.++.|..+.+|+....+ ..+++|...... ...+..|...++.+.. ..+.+.+.... ....+++|
T Consensus 11 ~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h---~~i~~~~~~~~--~~~~~lv~ 85 (270)
T cd05056 11 GRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDH---PHIVKLIGVIT--ENPVWIVM 85 (270)
T ss_pred eeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCC---CchhceeEEEc--CCCcEEEE
Confidence 4677888888999976422 257888876432 2345667777777642 23444444332 35678999
Q ss_pred ecccCCCC
Q 022304 98 EFIEFGSS 105 (299)
Q Consensus 98 e~l~G~~~ 105 (299)
|++++..+
T Consensus 86 e~~~~~~L 93 (270)
T cd05056 86 ELAPLGEL 93 (270)
T ss_pred EcCCCCcH
Confidence 99987643
No 367
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=97.14 E-value=0.004 Score=55.68 Aligned_cols=77 Identities=17% Similarity=0.135 Sum_probs=48.7
Q ss_pred eeeeCCccccceEEEEeC---C----ccEEEEecCCC-C---cchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEE
Q 022304 27 ICPVGGGCINLASRYGTD---A----GSFFVKTNRSI-G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI 95 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~~---~----g~~vlK~~~~~-~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~ 95 (299)
.+.+|.|..+.||++... + ..+.+|+.... . ...+..|...+..+..+ -.+.+++..........++
T Consensus 12 ~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h--~niv~~~~~~~~~~~~~~~ 89 (337)
T cd05054 12 GKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHH--LNVVNLLGACTKPGGPLMV 89 (337)
T ss_pred hcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccC--cchhheeeeEecCCCCEEE
Confidence 467788888899987531 1 26888987532 1 12345688888777443 2345555443322456789
Q ss_pred EEecccCCCC
Q 022304 96 IMEFIEFGSS 105 (299)
Q Consensus 96 v~e~l~G~~~ 105 (299)
+++|++|.++
T Consensus 90 v~ey~~~~~L 99 (337)
T cd05054 90 IVEYCKFGNL 99 (337)
T ss_pred EEecCCCCCH
Confidence 9999999755
No 368
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=97.13 E-value=0.0032 Score=55.79 Aligned_cols=73 Identities=15% Similarity=0.191 Sum_probs=45.2
Q ss_pred eeeeCCccccceEEEEeCC--ccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCCccceeecccC----CCceEE
Q 022304 27 ICPVGGGCINLASRYGTDA--GSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP----TGGSYI 95 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~~~--g~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~----~~~~~~ 95 (299)
.+.++.|..+.+|++...+ ..+++|..... ....+..|...++.+... .+.+++...... ....++
T Consensus 5 ~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~---~i~~~~~~~~~~~~~~~~~~~l 81 (330)
T cd07834 5 LKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHE---NIIGLLDILRPPSPEDFNDVYI 81 (330)
T ss_pred eeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCc---chhhhhhhhcccCcccccceEE
Confidence 3567888888999998643 47888876532 123467788888877532 233333322110 136789
Q ss_pred EEecccC
Q 022304 96 IMEFIEF 102 (299)
Q Consensus 96 v~e~l~G 102 (299)
+|+++++
T Consensus 82 v~e~~~~ 88 (330)
T cd07834 82 VTELMET 88 (330)
T ss_pred Eecchhh
Confidence 9998764
No 369
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=97.12 E-value=0.016 Score=48.53 Aligned_cols=77 Identities=12% Similarity=0.103 Sum_probs=57.5
Q ss_pred CcceeeeeeeCCccccceEEEEe-CCc-cEEEEecCCCC-cchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEE
Q 022304 21 ATHITKICPVGGGCINLASRYGT-DAG-SFFVKTNRSIG-PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM 97 (299)
Q Consensus 21 ~~~~~~~~~~~~G~~n~~y~v~~-~~g-~~vlK~~~~~~-~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~ 97 (299)
+....=+.++|.|...+.|.-.. .+| ++.+|..++.. -..+-.|..+++.|+. ++-.|.+..++.. .....+||
T Consensus 14 ~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~hpqL~yEskvY~iL~~--g~GiP~i~~y~~e-~~ynvlVM 90 (341)
T KOG1163|consen 14 GGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAKHPQLLYESKVYRILQG--GVGIPHIRHYGTE-KDYNVLVM 90 (341)
T ss_pred ccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCCCcchhHHHHHHHHhcc--CCCCchhhhhccc-cccceeee
Confidence 33556688999998899998553 455 89999987632 3457789999999975 5778888877653 45778899
Q ss_pred ecc
Q 022304 98 EFI 100 (299)
Q Consensus 98 e~l 100 (299)
+-+
T Consensus 91 dLL 93 (341)
T KOG1163|consen 91 DLL 93 (341)
T ss_pred ecc
Confidence 866
No 370
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=97.12 E-value=0.0045 Score=54.93 Aligned_cols=67 Identities=10% Similarity=0.037 Sum_probs=41.8
Q ss_pred cccceEEEEeC--CccEEEEecCCCC-----cchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEecccCCC
Q 022304 34 CINLASRYGTD--AGSFFVKTNRSIG-----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGS 104 (299)
Q Consensus 34 ~~n~~y~v~~~--~g~~vlK~~~~~~-----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~~ 104 (299)
..+.+|++... +..+.+|+..... ...+..|..+++.+.. -.+.+++..... .+..+++++++.|..
T Consensus 12 ~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h---~niv~~~~~~~~-~~~~~~v~e~~~~~~ 85 (328)
T cd08226 12 NLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRH---PNIMTSWTVFTT-GSWLWVISPFMAYGS 85 (328)
T ss_pred CceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCC---CCcceEeeeEec-CCceEEEEecccCCC
Confidence 55679998763 3478889875321 1345667766665643 234445544332 467899999998863
No 371
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=97.12 E-value=0.0091 Score=51.06 Aligned_cols=75 Identities=16% Similarity=0.041 Sum_probs=45.6
Q ss_pred eeeCCccccceEEEEeCC-----ccEEEEecCCCC-----cchHHHHHHHHHHHHhcCCCCCccceeecccC-----CCc
Q 022304 28 CPVGGGCINLASRYGTDA-----GSFFVKTNRSIG-----PSMFEGEALGLGAMYETRTIRAPRPFKVGALP-----TGG 92 (299)
Q Consensus 28 ~~~~~G~~n~~y~v~~~~-----g~~vlK~~~~~~-----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~-----~~~ 92 (299)
+.++.|..+.+|+..... ..+.+|...... ...+..|...++.+.. ..+.+++...... ...
T Consensus 5 ~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h---~~iv~~~~~~~~~~~~~~~~~ 81 (273)
T cd05035 5 KILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDH---PNVMKLIGVCFEASSLQKIPK 81 (273)
T ss_pred cccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCC---CCeeeEEeeeccCCccccCcc
Confidence 456788888999987532 258888765321 1235567777666642 2344555433221 124
Q ss_pred eEEEEecccCCCC
Q 022304 93 SYIIMEFIEFGSS 105 (299)
Q Consensus 93 ~~~v~e~l~G~~~ 105 (299)
.+++++|.++.++
T Consensus 82 ~~~v~e~~~~~~l 94 (273)
T cd05035 82 PMVILPFMKHGDL 94 (273)
T ss_pred cEEEEeccCCCCH
Confidence 7899999988744
No 372
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=97.11 E-value=0.0035 Score=54.49 Aligned_cols=73 Identities=16% Similarity=0.099 Sum_probs=44.9
Q ss_pred eeeeCCccccceEEEEeCC-c-cEEEEecCCCC-----cchHHHHHHHHHHHHhcCCCCCccceeecccC-CCceEEEEe
Q 022304 27 ICPVGGGCINLASRYGTDA-G-SFFVKTNRSIG-----PSMFEGEALGLGAMYETRTIRAPRPFKVGALP-TGGSYIIME 98 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~~~-g-~~vlK~~~~~~-----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~-~~~~~~v~e 98 (299)
...++.|..+.+|++.... + .+++|...... ...+..|...+..+. + -.+++++...... .+..++++|
T Consensus 10 ~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~-h--~ni~~~~~~~~~~~~~~~~lv~e 86 (293)
T cd07843 10 LNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQ-H--PNIVTVKEVVVGSNLDKIYMVME 86 (293)
T ss_pred hhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcC-C--CCEEEEEEEEEecCCCcEEEEeh
Confidence 3567778788999988753 3 67888765311 122456777777775 2 2344444332221 268899999
Q ss_pred cccC
Q 022304 99 FIEF 102 (299)
Q Consensus 99 ~l~G 102 (299)
++++
T Consensus 87 ~~~~ 90 (293)
T cd07843 87 YVEH 90 (293)
T ss_pred hcCc
Confidence 9975
No 373
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=97.11 E-value=0.0017 Score=60.05 Aligned_cols=95 Identities=15% Similarity=0.118 Sum_probs=59.8
Q ss_pred CCcchHHHHHHhcC----CCcceeeeeeeCCccccceEEEEeC-Cc-cEEEEecC-C--CCcchHHHHHHHHHHHHhcCC
Q 022304 6 LSDDPIREWILSEG----KATHITKICPVGGGCINLASRYGTD-AG-SFFVKTNR-S--IGPSMFEGEALGLGAMYETRT 76 (299)
Q Consensus 6 ~~~~~i~~~l~~~~----~~~~~~~~~~~~~G~~n~~y~v~~~-~g-~~vlK~~~-~--~~~~~~~~E~~~l~~L~~~~~ 76 (299)
|+.+++..-|+... +-......+++|.|.+..||...-. .+ .+.+|... . ..+..+-.|..+++-+..
T Consensus 253 ~~~~~~~~~l~~v~~~~dP~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H--- 329 (550)
T KOG0578|consen 253 VSKEEILAKLKRVVSQGDPRSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHH--- 329 (550)
T ss_pred chHHHHHHHhheeccCCChhhhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccc---
Confidence 34457777777662 2223456789999999999886643 22 45555443 1 234667788888876643
Q ss_pred CCCccceeecc-cC-CCceEEEEecccCCCCC
Q 022304 77 IRAPRPFKVGA-LP-TGGSYIIMEFIEFGSSR 106 (299)
Q Consensus 77 ~~vP~~~~~~~-~~-~~~~~~v~e~l~G~~~~ 106 (299)
|.++-+-+ .. .+.-|.+|||++|..++
T Consensus 330 ---~NiVnfl~Sylv~deLWVVMEym~ggsLT 358 (550)
T KOG0578|consen 330 ---PNIVNFLDSYLVGDELWVVMEYMEGGSLT 358 (550)
T ss_pred ---hHHHHHHHHhcccceeEEEEeecCCCchh
Confidence 44443321 11 35789999999998664
No 374
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=97.10 E-value=0.01 Score=51.09 Aligned_cols=78 Identities=22% Similarity=0.100 Sum_probs=48.8
Q ss_pred eeeeeeeCCccccceEEEEeCC-------ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCccceeecccCCCc
Q 022304 24 ITKICPVGGGCINLASRYGTDA-------GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGG 92 (299)
Q Consensus 24 ~~~~~~~~~G~~n~~y~v~~~~-------g~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~ 92 (299)
..-...++.|..+.+|++...+ ..+.+|...... ...+..|..+++.+.. ..+.+++..... .+.
T Consensus 8 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~---~~i~~~~~~~~~-~~~ 83 (277)
T cd05036 8 ITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNH---QNIVRLIGVSFE-RLP 83 (277)
T ss_pred cEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCC---CCEeeEEEEEcc-CCC
Confidence 3345678888888999987743 257778765321 1234556666666642 234445544332 457
Q ss_pred eEEEEecccCCCC
Q 022304 93 SYIIMEFIEFGSS 105 (299)
Q Consensus 93 ~~~v~e~l~G~~~ 105 (299)
.+++||+.+|.++
T Consensus 84 ~~lv~e~~~g~~L 96 (277)
T cd05036 84 RFILLELMAGGDL 96 (277)
T ss_pred cEEEEecCCCCCH
Confidence 7999999998744
No 375
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=97.10 E-value=0.011 Score=50.73 Aligned_cols=75 Identities=21% Similarity=0.111 Sum_probs=46.8
Q ss_pred eeeeCCccccceEEEEeC----Cc-cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEE
Q 022304 27 ICPVGGGCINLASRYGTD----AG-SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM 97 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~~----~g-~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~ 97 (299)
.+.++.|....||+.... .+ .+.+|...... ...+..|...+..+. + -.+++++..... .+..+++|
T Consensus 10 ~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~-h--~~iv~~~~~~~~-~~~~~lv~ 85 (266)
T cd05064 10 ERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFD-H--SNIVRLEGVITR-GNTMMIVT 85 (266)
T ss_pred eeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCC-C--CCcCeEEEEEec-CCCcEEEE
Confidence 356788888899987542 12 56778765421 123456776666553 2 235555554332 56789999
Q ss_pred ecccCCCC
Q 022304 98 EFIEFGSS 105 (299)
Q Consensus 98 e~l~G~~~ 105 (299)
|+++|..+
T Consensus 86 e~~~~~~L 93 (266)
T cd05064 86 EYMSNGAL 93 (266)
T ss_pred EeCCCCcH
Confidence 99999744
No 376
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=97.09 E-value=0.0037 Score=54.56 Aligned_cols=76 Identities=13% Similarity=0.145 Sum_probs=47.0
Q ss_pred eeeeeCCccccceEEEEeC--CccEEEEecCCC---CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEecc
Q 022304 26 KICPVGGGCINLASRYGTD--AGSFFVKTNRSI---GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI 100 (299)
Q Consensus 26 ~~~~~~~G~~n~~y~v~~~--~g~~vlK~~~~~---~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l 100 (299)
....++.|..+.+|++... +..+++|..... ....+..|...++.+.. ..+.+++..... .+..+++||++
T Consensus 26 ~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h---~~ii~~~~~~~~-~~~~~lv~e~~ 101 (292)
T cd06658 26 SFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHH---ENVVDMYNSYLV-GDELWVVMEFL 101 (292)
T ss_pred hhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCC---CcHHHHHHheec-CCeEEEEEeCC
Confidence 3567888888899998763 337888876432 12345567776666642 123333332221 46789999999
Q ss_pred cCCCC
Q 022304 101 EFGSS 105 (299)
Q Consensus 101 ~G~~~ 105 (299)
+|..+
T Consensus 102 ~~~~L 106 (292)
T cd06658 102 EGGAL 106 (292)
T ss_pred CCCcH
Confidence 98643
No 377
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=97.07 E-value=0.00067 Score=63.27 Aligned_cols=160 Identities=18% Similarity=0.181 Sum_probs=94.1
Q ss_pred cchHHHHHHhcCCCcceeeeeeeCCccccceEEEEeCCc--cEEE-EecCCC--C--c-chHHHHHHHHHHHHhcCCCCC
Q 022304 8 DDPIREWILSEGKATHITKICPVGGGCINLASRYGTDAG--SFFV-KTNRSI--G--P-SMFEGEALGLGAMYETRTIRA 79 (299)
Q Consensus 8 ~~~i~~~l~~~~~~~~~~~~~~~~~G~~n~~y~v~~~~g--~~vl-K~~~~~--~--~-~~~~~E~~~l~~L~~~~~~~v 79 (299)
.-+|+++.....+.--...+..||.|....||..+.... .+.+ |++.+. . . ..+-.|+.+|+.|..
T Consensus 12 DPeiA~LF~k~DPEklf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~H------ 85 (948)
T KOG0577|consen 12 DPEIADLFFKDDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRH------ 85 (948)
T ss_pred CchHHHHHccCCHHHHHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccC------
Confidence 345666665554444456688999999999999887544 3333 454432 1 1 336678888877753
Q ss_pred ccceeec--ccCCCceEEEEecccCCCCCCcHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCCCCHHHHHHHh
Q 022304 80 PRPFKVG--ALPTGGSYIIMEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEH 157 (299)
Q Consensus 80 P~~~~~~--~~~~~~~~~v~e~l~G~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 157 (299)
|..+.+. -..+...|+||||+-|... . |-..|+-+.. . .
T Consensus 86 PntieYkgCyLre~TaWLVMEYClGSAs-----D----lleVhkKplq----------------------E--------v 126 (948)
T KOG0577|consen 86 PNTIEYKGCYLREHTAWLVMEYCLGSAS-----D----LLEVHKKPLQ----------------------E--------V 126 (948)
T ss_pred CCcccccceeeccchHHHHHHHHhccHH-----H----HHHHHhccch----------------------H--------H
Confidence 6666442 1224578999999988521 2 2334553320 0 0
Q ss_pred hhHHHHHHHHhhcCChHHHHHHHHHHHHHhccccCCCCCcceeccCCCCCCeeecCCCCeEEEccc-cccCCchhhh
Q 022304 158 RLGYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA-CYYGHNEAEF 233 (299)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~liHgDl~~~Nvl~~~~~~~~iID~~-~~~g~~~~Dl 233 (299)
.+. +.....+..+. ++. ....||.|++.||||+++.|.+.+-||. +.+..|+--+
T Consensus 127 EIA----------------Ai~~gaL~gLa-YLH----S~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~PAnsF 182 (948)
T KOG0577|consen 127 EIA----------------AITHGALQGLA-YLH----SHNRIHRDIKAGNILLSEPGLVKLADFGSASIMAPANSF 182 (948)
T ss_pred HHH----------------HHHHHHHHHHH-HHH----HhhHHhhhccccceEecCCCeeeeccccchhhcCchhcc
Confidence 011 11122233333 222 3578999999999999988877777764 4455555444
No 378
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=97.07 E-value=0.0058 Score=54.57 Aligned_cols=27 Identities=30% Similarity=0.424 Sum_probs=24.1
Q ss_pred cceeccCCCCCCeeecCCCCeEEEccc
Q 022304 197 PCLLHGDLWSGNISSDKNGEPVILDPA 223 (299)
Q Consensus 197 ~~liHgDl~~~Nvl~~~~~~~~iID~~ 223 (299)
..++|+|++|.||++++++.+.|+|+.
T Consensus 137 ~~ivHrdikp~Nil~~~~~~~kl~Dfg 163 (343)
T cd07878 137 AGIIHRDLKPSNVAVNEDCELRILDFG 163 (343)
T ss_pred CCeecccCChhhEEECCCCCEEEcCCc
Confidence 479999999999999988888899974
No 379
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=97.06 E-value=0.0097 Score=51.90 Aligned_cols=77 Identities=13% Similarity=0.078 Sum_probs=47.6
Q ss_pred eeeeeeCCccccceEEEEeC--CccEEEEecCCC---CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEec
Q 022304 25 TKICPVGGGCINLASRYGTD--AGSFFVKTNRSI---GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 99 (299)
Q Consensus 25 ~~~~~~~~G~~n~~y~v~~~--~g~~vlK~~~~~---~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~ 99 (299)
.-++.++.|..+.+|++... +..+++|..... ....+..|...++.+.. -.+++++..... ....++++||
T Consensus 22 ~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h---p~i~~~~~~~~~-~~~~~lv~e~ 97 (293)
T cd06647 22 TRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKH---PNIVNYLDSYLV-GDELWVVMEY 97 (293)
T ss_pred eeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCC---CCeeehhheeee-CCcEEEEEec
Confidence 34577888888899998753 347888886532 12335566666665532 123333332221 4578999999
Q ss_pred ccCCCC
Q 022304 100 IEFGSS 105 (299)
Q Consensus 100 l~G~~~ 105 (299)
++|..+
T Consensus 98 ~~~~~L 103 (293)
T cd06647 98 LAGGSL 103 (293)
T ss_pred CCCCcH
Confidence 998743
No 380
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=97.04 E-value=0.0063 Score=52.14 Aligned_cols=75 Identities=17% Similarity=0.135 Sum_probs=45.8
Q ss_pred eeeCCccccceEEEEeCCc----cEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCCccceeeccc--C---CCce
Q 022304 28 CPVGGGCINLASRYGTDAG----SFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGAL--P---TGGS 93 (299)
Q Consensus 28 ~~~~~G~~n~~y~v~~~~g----~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~--~---~~~~ 93 (299)
+.++.|..+.||+....+. .+.+|..... ....+..|..+++.+.. -.+.+++..... . ....
T Consensus 5 ~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h---~~iv~~~~~~~~~~~~~~~~~~ 81 (272)
T cd05075 5 KTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDH---PNVMRLIGVCLQTVESEGYPSP 81 (272)
T ss_pred cccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCC---CCcceEEEEEccCCcccCCCCc
Confidence 4567788889999876432 4777876432 12345667777777742 234555543211 0 1356
Q ss_pred EEEEecccCCCC
Q 022304 94 YIIMEFIEFGSS 105 (299)
Q Consensus 94 ~~v~e~l~G~~~ 105 (299)
+++++|+++.++
T Consensus 82 ~~v~e~~~~~~l 93 (272)
T cd05075 82 VVILPFMKHGDL 93 (272)
T ss_pred EEEEEeCCCCcH
Confidence 899999998644
No 381
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=97.03 E-value=0.008 Score=52.52 Aligned_cols=74 Identities=16% Similarity=0.128 Sum_probs=44.5
Q ss_pred eeeeeCCccccceEEEEeC--CccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCCccceeeccc-------CCC
Q 022304 26 KICPVGGGCINLASRYGTD--AGSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGAL-------PTG 91 (299)
Q Consensus 26 ~~~~~~~G~~n~~y~v~~~--~g~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~-------~~~ 91 (299)
-+..++.|..+.+|++... +..+++|..... .......|+..++.+... .+.+++..... ..+
T Consensus 16 ~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~---~iv~~~~~~~~~~~~~~~~~~ 92 (310)
T cd07865 16 KLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHE---NVVNLIEICRTKATPYNRYKG 92 (310)
T ss_pred EEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCC---CccceEEEEecccccccCCCc
Confidence 3567888888899999864 237888876421 112345688888777542 12223322111 024
Q ss_pred ceEEEEecccC
Q 022304 92 GSYIIMEFIEF 102 (299)
Q Consensus 92 ~~~~v~e~l~G 102 (299)
..+++||+..+
T Consensus 93 ~~~lv~e~~~~ 103 (310)
T cd07865 93 SFYLVFEFCEH 103 (310)
T ss_pred eEEEEEcCCCc
Confidence 56999999865
No 382
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=97.03 E-value=0.0078 Score=51.43 Aligned_cols=75 Identities=16% Similarity=0.043 Sum_probs=46.1
Q ss_pred eeeeCCccccceEEEEeC--CccEEEEecCCCC---cchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEeccc
Q 022304 27 ICPVGGGCINLASRYGTD--AGSFFVKTNRSIG---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE 101 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~~--~g~~vlK~~~~~~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~ 101 (299)
.+.++.|..+.+|++... +..+++|...... ...+..|...++.+.. -.+.+.+..... .+..++++|+++
T Consensus 14 ~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h---~~ii~~~~~~~~-~~~~~lv~e~~~ 89 (267)
T cd06645 14 IQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKH---SNIVAYFGSYLR-RDKLWICMEFCG 89 (267)
T ss_pred HHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCC---CCeeeEEEEEEe-CCEEEEEEeccC
Confidence 356777888899998753 2378888765321 1234567766666632 123333333222 468899999999
Q ss_pred CCCC
Q 022304 102 FGSS 105 (299)
Q Consensus 102 G~~~ 105 (299)
|..+
T Consensus 90 ~~~L 93 (267)
T cd06645 90 GGSL 93 (267)
T ss_pred CCcH
Confidence 8744
No 383
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=97.03 E-value=0.0053 Score=53.06 Aligned_cols=78 Identities=17% Similarity=0.133 Sum_probs=50.4
Q ss_pred eeeeeeeCCccccceEEEEeC------Cc-cEEEEecCCCC---cchHHHHHHHHHHHHhcCCCCCccceeecccCCCce
Q 022304 24 ITKICPVGGGCINLASRYGTD------AG-SFFVKTNRSIG---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGS 93 (299)
Q Consensus 24 ~~~~~~~~~G~~n~~y~v~~~------~g-~~vlK~~~~~~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~ 93 (299)
+.-.+.++.|..+.+|++... ++ .+.+|...... ...+..|..+++.+.. ..+.+++..... .+..
T Consensus 7 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~ 82 (280)
T cd05092 7 IVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQH---QHIVRFYGVCTE-GRPL 82 (280)
T ss_pred ceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCC---CCCceEEEEEec-CCce
Confidence 445677888888899998632 12 56667655321 2456778888877743 234555554433 4678
Q ss_pred EEEEecccCCCC
Q 022304 94 YIIMEFIEFGSS 105 (299)
Q Consensus 94 ~~v~e~l~G~~~ 105 (299)
++++|+++|..+
T Consensus 83 ~lv~e~~~~~~L 94 (280)
T cd05092 83 LMVFEYMRHGDL 94 (280)
T ss_pred EEEEecCCCCCH
Confidence 999999998754
No 384
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=97.02 E-value=0.015 Score=50.26 Aligned_cols=27 Identities=22% Similarity=0.175 Sum_probs=23.5
Q ss_pred cceeccCCCCCCeeecCCCCeEEEccc
Q 022304 197 PCLLHGDLWSGNISSDKNGEPVILDPA 223 (299)
Q Consensus 197 ~~liHgDl~~~Nvl~~~~~~~~iID~~ 223 (299)
..++|+|++|.||++++++.+.++|+.
T Consensus 128 ~~iiH~dlkp~nili~~~~~~kl~Dfg 154 (279)
T cd05111 128 HRMVHRNLAARNILLKSDSIVQIADFG 154 (279)
T ss_pred CCEeccccCcceEEEcCCCcEEEcCCc
Confidence 459999999999999888778899974
No 385
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=97.01 E-value=0.0074 Score=52.07 Aligned_cols=55 Identities=16% Similarity=0.109 Sum_probs=31.5
Q ss_pred cEEEEecCCCCc---chHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEecccCCCC
Q 022304 47 SFFVKTNRSIGP---SMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSS 105 (299)
Q Consensus 47 ~~vlK~~~~~~~---~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~~~ 105 (299)
++++|+...... ..+..|+.+++.+.. ..+++++..... .+..+++|||++|..+
T Consensus 46 ~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h---~niv~~~~~~~~-~~~~~lv~ey~~~g~L 103 (274)
T cd05076 46 RVVLKVLDPSHRDIALAFFETASLMSQVSH---IHLAFVHGVCVR-GSENIMVEEFVEHGPL 103 (274)
T ss_pred eEEEEecChHHHHHHHHHHHHHHHHhcCCC---CCeeeEEEEEEe-CCceEEEEecCCCCcH
Confidence 467777653211 123345555544432 345566655433 4678999999999743
No 386
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=97.00 E-value=0.0095 Score=53.05 Aligned_cols=74 Identities=12% Similarity=0.068 Sum_probs=44.0
Q ss_pred eeeeeCCccccceEEEEeC--CccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCccceeeccc---C-CCceEE
Q 022304 26 KICPVGGGCINLASRYGTD--AGSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGAL---P-TGGSYI 95 (299)
Q Consensus 26 ~~~~~~~G~~n~~y~v~~~--~g~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~---~-~~~~~~ 95 (299)
-.+.++.|..+.+|++... +..+++|...... ...+..|..+++.+... .+.+++..... . ....++
T Consensus 9 i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~~~~~~~~~~~~~~~~~~l 85 (336)
T cd07849 9 NLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHE---NIIGILDIIRPPSFESFNDVYI 85 (336)
T ss_pred EEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCC---CcCchhheeecccccccceEEE
Confidence 3567888888899998653 3378899765311 12345677777777532 22333322111 0 235689
Q ss_pred EEecccC
Q 022304 96 IMEFIEF 102 (299)
Q Consensus 96 v~e~l~G 102 (299)
+++++++
T Consensus 86 v~e~~~~ 92 (336)
T cd07849 86 VQELMET 92 (336)
T ss_pred Eehhccc
Confidence 9998865
No 387
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=97.00 E-value=0.012 Score=49.82 Aligned_cols=72 Identities=22% Similarity=0.194 Sum_probs=46.2
Q ss_pred eeCCccccceEEEEeC--Cc---cEEEEecCCCCc----chHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEec
Q 022304 29 PVGGGCINLASRYGTD--AG---SFFVKTNRSIGP----SMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 99 (299)
Q Consensus 29 ~~~~G~~n~~y~v~~~--~g---~~vlK~~~~~~~----~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~ 99 (299)
.++.|..+.+|++... ++ .+++|..+.... ..+..|...++.+... .+.+++.... ....++++|+
T Consensus 2 ~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~---~iv~~~~~~~--~~~~~~v~e~ 76 (257)
T cd05040 2 KLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHE---NLIRLYGVVL--THPLMMVTEL 76 (257)
T ss_pred cCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCC---CccceeEEEc--CCeEEEEEEe
Confidence 4677888899998753 23 478898875322 3456677777777531 2344444332 2577999999
Q ss_pred ccCCCC
Q 022304 100 IEFGSS 105 (299)
Q Consensus 100 l~G~~~ 105 (299)
.+|.++
T Consensus 77 ~~~~~L 82 (257)
T cd05040 77 APLGSL 82 (257)
T ss_pred cCCCcH
Confidence 988744
No 388
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=96.96 E-value=0.0041 Score=53.76 Aligned_cols=74 Identities=11% Similarity=0.024 Sum_probs=44.9
Q ss_pred eeeeCCccccceEEEEeCC-------ccEEEEecCCCCc----chHHHHHHHHHHHHhcCCCCCccceeecccCCCceEE
Q 022304 27 ICPVGGGCINLASRYGTDA-------GSFFVKTNRSIGP----SMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI 95 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~~~-------g~~vlK~~~~~~~----~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~ 95 (299)
++.+|.|..+.||+....+ ..+.+|....... ..+..|..++..+.. -.+.+++..... .+..++
T Consensus 10 ~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h---~~iv~~~~~~~~-~~~~~~ 85 (283)
T cd05091 10 MEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQH---PNIVCLLGVVTK-EQPLSM 85 (283)
T ss_pred HHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCC---CCcCeEEEEEcC-CCceEE
Confidence 3456777778899876421 2688888764321 335566666655532 234445544332 456789
Q ss_pred EEecccCCC
Q 022304 96 IMEFIEFGS 104 (299)
Q Consensus 96 v~e~l~G~~ 104 (299)
++++.++..
T Consensus 86 ~~e~~~~~~ 94 (283)
T cd05091 86 IFSYCSHSD 94 (283)
T ss_pred EEEcCCCCc
Confidence 999998764
No 389
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=96.96 E-value=0.0077 Score=51.78 Aligned_cols=71 Identities=15% Similarity=0.130 Sum_probs=45.2
Q ss_pred eeeCCccccceEEEEeCC--ccEEEEecCCCC-----cchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEecc
Q 022304 28 CPVGGGCINLASRYGTDA--GSFFVKTNRSIG-----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI 100 (299)
Q Consensus 28 ~~~~~G~~n~~y~v~~~~--g~~vlK~~~~~~-----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l 100 (299)
..++.|..+.+|+....+ ..|++|...... ...+..|+.+++.+.. -.+++++..... .+..++++++.
T Consensus 5 ~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~---~~i~~~~~~~~~-~~~~~~v~e~~ 80 (282)
T cd07829 5 EKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKH---PNIVKLLDVIHT-ERKLYLVFEYC 80 (282)
T ss_pred hcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCC---CCHHHHHhhhhc-CCceEEEecCc
Confidence 456777778999988753 488889876421 1334567777776642 223444433322 46889999998
Q ss_pred cC
Q 022304 101 EF 102 (299)
Q Consensus 101 ~G 102 (299)
++
T Consensus 81 ~~ 82 (282)
T cd07829 81 DM 82 (282)
T ss_pred Cc
Confidence 75
No 390
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=96.95 E-value=0.012 Score=52.70 Aligned_cols=78 Identities=17% Similarity=0.117 Sum_probs=45.5
Q ss_pred ceeeeeeeCCccccceEEEEeC-Cc-cEEEEecCCC--C---cchHHHHHHHHHHHHhcCCCCCccceeecccCC--Cce
Q 022304 23 HITKICPVGGGCINLASRYGTD-AG-SFFVKTNRSI--G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPT--GGS 93 (299)
Q Consensus 23 ~~~~~~~~~~G~~n~~y~v~~~-~g-~~vlK~~~~~--~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~--~~~ 93 (299)
.-..+..+|.|..+.||++... ++ .+++|..... . ...+..|...++.+....-+....++..+.... ...
T Consensus 16 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 95 (343)
T cd07880 16 RYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRFHDF 95 (343)
T ss_pred ceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccccceE
Confidence 3445678898988999998753 34 7888976431 1 123567888888885421112222222211101 245
Q ss_pred EEEEecc
Q 022304 94 YIIMEFI 100 (299)
Q Consensus 94 ~~v~e~l 100 (299)
+++|+++
T Consensus 96 ~lv~e~~ 102 (343)
T cd07880 96 YLVMPFM 102 (343)
T ss_pred EEEEecC
Confidence 8999988
No 391
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=96.93 E-value=0.0084 Score=52.41 Aligned_cols=74 Identities=11% Similarity=0.068 Sum_probs=44.8
Q ss_pred eeeeeCCccccceEEEEeC--CccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCCccceeeccc------C-CC
Q 022304 26 KICPVGGGCINLASRYGTD--AGSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGAL------P-TG 91 (299)
Q Consensus 26 ~~~~~~~G~~n~~y~v~~~--~g~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~------~-~~ 91 (299)
-.+.++.|..+.+|++... +..+++|..... ......+|...++.+... .+.+++..... . ..
T Consensus 12 ~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~---~i~~~~~~~~~~~~~~~~~~~ 88 (311)
T cd07866 12 ILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHP---NVVPLIDMAVERPDKSKRKRG 88 (311)
T ss_pred EEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCC---CccchhhheecccccccccCc
Confidence 3466888888899998763 337888876421 122356788888888542 22333322111 0 23
Q ss_pred ceEEEEecccC
Q 022304 92 GSYIIMEFIEF 102 (299)
Q Consensus 92 ~~~~v~e~l~G 102 (299)
..+++++|.++
T Consensus 89 ~~~lv~~~~~~ 99 (311)
T cd07866 89 SVYMVTPYMDH 99 (311)
T ss_pred eEEEEEecCCc
Confidence 46889998765
No 392
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=96.93 E-value=0.0077 Score=52.91 Aligned_cols=27 Identities=15% Similarity=0.217 Sum_probs=22.9
Q ss_pred cceeccCCCCCCeeecCCCCeEEEccc
Q 022304 197 PCLLHGDLWSGNISSDKNGEPVILDPA 223 (299)
Q Consensus 197 ~~liHgDl~~~Nvl~~~~~~~~iID~~ 223 (299)
..++|+|++|+||+++.++...+.|+.
T Consensus 120 ~~ivH~dlk~~Nili~~~~~~kl~d~~ 146 (314)
T cd08216 120 KGFIHRSVKASHILLSGDGKVVLSGLR 146 (314)
T ss_pred CCeecCCCCcceEEEecCCceEEecCc
Confidence 469999999999999887777788863
No 393
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=96.92 E-value=0.0034 Score=56.75 Aligned_cols=73 Identities=14% Similarity=0.046 Sum_probs=40.6
Q ss_pred eCCccccceEEE-EeCCccEE-EEecCC--CCc--------chHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEE
Q 022304 30 VGGGCINLASRY-GTDAGSFF-VKTNRS--IGP--------SMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM 97 (299)
Q Consensus 30 ~~~G~~n~~y~v-~~~~g~~v-lK~~~~--~~~--------~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~ 97 (299)
+|.|..+.||+. ...+.+|| +||..- .-+ ...-+|+++.+.|.. ..+.++|.+-..+.+..+.|+
T Consensus 471 LGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDH---pRIVKlYDyfslDtdsFCTVL 547 (775)
T KOG1151|consen 471 LGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDH---PRIVKLYDYFSLDTDSFCTVL 547 (775)
T ss_pred hccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCc---ceeeeeeeeeeeccccceeee
Confidence 456667888884 44566765 588752 111 112345555554431 223333433222246789999
Q ss_pred ecccCCCC
Q 022304 98 EFIEFGSS 105 (299)
Q Consensus 98 e~l~G~~~ 105 (299)
||++|-++
T Consensus 548 EYceGNDL 555 (775)
T KOG1151|consen 548 EYCEGNDL 555 (775)
T ss_pred eecCCCch
Confidence 99999755
No 394
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=96.92 E-value=0.0086 Score=50.42 Aligned_cols=27 Identities=22% Similarity=0.171 Sum_probs=23.8
Q ss_pred cceeccCCCCCCeeecCCCCeEEEccc
Q 022304 197 PCLLHGDLWSGNISSDKNGEPVILDPA 223 (299)
Q Consensus 197 ~~liHgDl~~~Nvl~~~~~~~~iID~~ 223 (299)
..++|+|++|.||+++.++...++|+.
T Consensus 104 ~~i~H~dlkp~Nil~~~~~~~~l~df~ 130 (237)
T cd05576 104 EGIVCRDLNPNNILLDDRGHIQLTYFS 130 (237)
T ss_pred CCeeccCCCHHHEEEcCCCCEEEeccc
Confidence 479999999999999988878889964
No 395
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=96.91 E-value=0.019 Score=56.15 Aligned_cols=74 Identities=15% Similarity=0.022 Sum_probs=52.8
Q ss_pred eeeCCccccceEEEEeC-Cc-cEEEEecCC--CCcchHHHHHHHHHHHHhcCCCCCccceeecccC----CCceEEEEec
Q 022304 28 CPVGGGCINLASRYGTD-AG-SFFVKTNRS--IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALP----TGGSYIIMEF 99 (299)
Q Consensus 28 ~~~~~G~~n~~y~v~~~-~g-~~vlK~~~~--~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~----~~~~~~v~e~ 99 (299)
+-++.|....||++..- .+ -..+||-.. +....++.|+.++..+..+ --|++-|.+.... .+.-|+||||
T Consensus 25 evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~deEiE~eynil~~~~~h--pnv~~fyg~~~k~~~~~~DqLWLVMEf 102 (953)
T KOG0587|consen 25 EVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEEEEIELEYNMLKKYSHH--PNVATFYGAFIKKDPGNGDQLWLVMEF 102 (953)
T ss_pred EEEeeccceeEEEEeeeecCceeeeEeecCCccccHHHHHHHHHHHhccCC--CCcceEEEEEEEecCCCCCeEEEEeec
Confidence 45566777788888753 33 567788765 3456789999999999876 3567666543221 4688999999
Q ss_pred ccCC
Q 022304 100 IEFG 103 (299)
Q Consensus 100 l~G~ 103 (299)
+.|+
T Consensus 103 C~gG 106 (953)
T KOG0587|consen 103 CGGG 106 (953)
T ss_pred cCCc
Confidence 9997
No 396
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=96.91 E-value=0.0076 Score=52.95 Aligned_cols=76 Identities=9% Similarity=-0.031 Sum_probs=45.9
Q ss_pred eeeeeeeCCccccceEEEEeC-Cc-cEEEEecCCC---C---cchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEE
Q 022304 24 ITKICPVGGGCINLASRYGTD-AG-SFFVKTNRSI---G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI 95 (299)
Q Consensus 24 ~~~~~~~~~G~~n~~y~v~~~-~g-~~vlK~~~~~---~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~ 95 (299)
...+..++.|..+.+|++... ++ .+++|..... . ...+..|...++.+... .+.+++..... ....++
T Consensus 17 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~---~i~~~~~~~~~-~~~~~l 92 (308)
T cd06634 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHP---NTIQYRGCYLR-EHTAWL 92 (308)
T ss_pred HHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCC---CcccEEEEEEc-CCeeEE
Confidence 334567888888899998763 33 6778876421 1 12344677777777432 23333333222 467899
Q ss_pred EEecccCC
Q 022304 96 IMEFIEFG 103 (299)
Q Consensus 96 v~e~l~G~ 103 (299)
+++++.|.
T Consensus 93 v~e~~~~~ 100 (308)
T cd06634 93 VMEYCLGS 100 (308)
T ss_pred EEEccCCC
Confidence 99999763
No 397
>PHA02988 hypothetical protein; Provisional
Probab=96.88 E-value=0.011 Score=51.37 Aligned_cols=75 Identities=11% Similarity=0.007 Sum_probs=50.0
Q ss_pred eeeCCccccceEEEEeCCccEEEEecCCCC------cchHHHHHHHHHHHHhcCCCCCccceeeccc--C-CCceEEEEe
Q 022304 28 CPVGGGCINLASRYGTDAGSFFVKTNRSIG------PSMFEGEALGLGAMYETRTIRAPRPFKVGAL--P-TGGSYIIME 98 (299)
Q Consensus 28 ~~~~~G~~n~~y~v~~~~g~~vlK~~~~~~------~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~--~-~~~~~~v~e 98 (299)
..++.|....+|+...++..+++|...... ...+..|+..+..+.. + .+.+++..... . ....+++||
T Consensus 26 ~~i~~g~~~~v~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h--~-nIv~~~g~~~~~~~~~~~~~lv~E 102 (283)
T PHA02988 26 VLIKENDQNSIYKGIFNNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDS--N-NILKIYGFIIDIVDDLPRLSLILE 102 (283)
T ss_pred eEEeeCCceEEEEEEECCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCC--C-CEEEEeeeEEecccCCCceEEEEE
Confidence 456667777899988876789999876421 1345688888888753 2 45555543221 1 246789999
Q ss_pred cccCCCC
Q 022304 99 FIEFGSS 105 (299)
Q Consensus 99 ~l~G~~~ 105 (299)
|++|..+
T Consensus 103 y~~~g~L 109 (283)
T PHA02988 103 YCTRGYL 109 (283)
T ss_pred eCCCCcH
Confidence 9999754
No 398
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=96.84 E-value=0.0091 Score=52.03 Aligned_cols=73 Identities=16% Similarity=0.159 Sum_probs=44.0
Q ss_pred eeeeCCccccceEEEEeCC-c-cEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCCccceeecccC---------C
Q 022304 27 ICPVGGGCINLASRYGTDA-G-SFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP---------T 90 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~~~-g-~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~---------~ 90 (299)
...++.|..+.+|++.... + .+++|..... ....+..|...++.+... .+.+++...... .
T Consensus 12 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~---~i~~~~~~~~~~~~~~~~~~~~ 88 (302)
T cd07864 12 IGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHR---NIVNLKEIVTDKQDALDFKKDK 88 (302)
T ss_pred eeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCC---CeeeeeheecCcchhhhccccC
Confidence 3567778788999988743 3 6777876531 123456688777777431 223333221110 2
Q ss_pred CceEEEEecccC
Q 022304 91 GGSYIIMEFIEF 102 (299)
Q Consensus 91 ~~~~~v~e~l~G 102 (299)
+..++++++++|
T Consensus 89 ~~~~lv~e~~~~ 100 (302)
T cd07864 89 GAFYLVFEYMDH 100 (302)
T ss_pred CcEEEEEcccCc
Confidence 367899999876
No 399
>PHA03210 serine/threonine kinase US3; Provisional
Probab=96.83 E-value=0.0045 Score=58.54 Aligned_cols=27 Identities=30% Similarity=0.278 Sum_probs=24.2
Q ss_pred cceeccCCCCCCeeecCCCCeEEEccc
Q 022304 197 PCLLHGDLWSGNISSDKNGEPVILDPA 223 (299)
Q Consensus 197 ~~liHgDl~~~Nvl~~~~~~~~iID~~ 223 (299)
..++|+|++|+|||++.++.+.|+||.
T Consensus 286 ~gIiHrDLKP~NILl~~~~~vkL~DFG 312 (501)
T PHA03210 286 KKLIHRDIKLENIFLNCDGKIVLGDFG 312 (501)
T ss_pred CCeecCCCCHHHEEECCCCCEEEEeCC
Confidence 479999999999999988888899974
No 400
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=96.80 E-value=0.016 Score=50.76 Aligned_cols=76 Identities=16% Similarity=0.160 Sum_probs=45.4
Q ss_pred eeeeeeeCCccccceEEEEeC-Cc-----cEEEEecCCCCc----chHHHHHHHHHHHHhcCCCCCccceeecccCCCce
Q 022304 24 ITKICPVGGGCINLASRYGTD-AG-----SFFVKTNRSIGP----SMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGS 93 (299)
Q Consensus 24 ~~~~~~~~~G~~n~~y~v~~~-~g-----~~vlK~~~~~~~----~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~ 93 (299)
...++.++.|..+.+|++... .+ .+++|....... ..+..|..+++.+.. -.+.+++.... ....
T Consensus 9 ~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h---~niv~~~~~~~--~~~~ 83 (303)
T cd05110 9 LKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDH---PHLVRLLGVCL--SPTI 83 (303)
T ss_pred ceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCC---CCcccEEEEEc--CCCc
Confidence 445677888888999998752 23 367787654321 134566666666532 22344444332 2456
Q ss_pred EEEEecccCCC
Q 022304 94 YIIMEFIEFGS 104 (299)
Q Consensus 94 ~~v~e~l~G~~ 104 (299)
++++++.+++.
T Consensus 84 ~~v~e~~~~g~ 94 (303)
T cd05110 84 QLVTQLMPHGC 94 (303)
T ss_pred eeeehhcCCCC
Confidence 78888888754
No 401
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=96.80 E-value=0.019 Score=49.23 Aligned_cols=76 Identities=17% Similarity=0.125 Sum_probs=46.3
Q ss_pred eeeeeCCccccceEEEEeCC-------ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCccceeecccCCCceE
Q 022304 26 KICPVGGGCINLASRYGTDA-------GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSY 94 (299)
Q Consensus 26 ~~~~~~~G~~n~~y~v~~~~-------g~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~ 94 (299)
-...++.|..+.||+....+ ..+.+|...... ...+..|...+..+.. -.+.+++..... .+..+
T Consensus 10 ~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~---~~i~~~~~~~~~-~~~~~ 85 (277)
T cd05032 10 LIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNC---HHVVRLLGVVST-GQPTL 85 (277)
T ss_pred EEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCC---CceeEEEEEEcC-CCCcE
Confidence 34678888888999877532 368889876432 1224456655555432 123444444332 46789
Q ss_pred EEEecccCCCC
Q 022304 95 IIMEFIEFGSS 105 (299)
Q Consensus 95 ~v~e~l~G~~~ 105 (299)
++||+.++.++
T Consensus 86 ~v~e~~~~~~L 96 (277)
T cd05032 86 VVMELMAKGDL 96 (277)
T ss_pred EEEecCCCCCH
Confidence 99999987643
No 402
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=96.80 E-value=0.016 Score=51.52 Aligned_cols=74 Identities=16% Similarity=0.118 Sum_probs=45.1
Q ss_pred eeeeeCCccccceEEEEeC-Cc-cEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEe
Q 022304 26 KICPVGGGCINLASRYGTD-AG-SFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 98 (299)
Q Consensus 26 ~~~~~~~G~~n~~y~v~~~-~g-~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e 98 (299)
-+..++.|..+.+|++... .+ .+++|..... ....+..|.++++.+... .+.+++..........+++++
T Consensus 14 ~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hp---niv~~~~~~~~~~~~~~lv~e 90 (328)
T cd07856 14 DLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHE---NIISLSDIFISPLEDIYFVTE 90 (328)
T ss_pred EEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCC---CeeeEeeeEecCCCcEEEEee
Confidence 4567888888899998754 33 7888865321 123456788888777531 223333322211346789999
Q ss_pred cccC
Q 022304 99 FIEF 102 (299)
Q Consensus 99 ~l~G 102 (299)
+..+
T Consensus 91 ~~~~ 94 (328)
T cd07856 91 LLGT 94 (328)
T ss_pred hhcc
Confidence 8743
No 403
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=96.79 E-value=0.0045 Score=53.77 Aligned_cols=64 Identities=14% Similarity=0.025 Sum_probs=43.7
Q ss_pred cEEEEecCC---CCcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEecccCCCCCCcHHHHHHHHHHHHhcC
Q 022304 47 SFFVKTNRS---IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSRGNQSVFGKKLAEMHKAG 123 (299)
Q Consensus 47 ~~vlK~~~~---~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~~~~~~~~~lg~~La~lH~~~ 123 (299)
.|.|||-.. ..+.++-+|++.+.+-..+ ..+-+++.+-+. +...|+|+|.+.|+++ |.+||+..
T Consensus 105 EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh--~nilqLiefFEd-d~~FYLVfEKm~GGpl----------LshI~~~~ 171 (463)
T KOG0607|consen 105 EYAVKIIDKQPGHSRSRVFREVETFYQCQGH--KNILQLIEFFED-DTRFYLVFEKMRGGPL----------LSHIQKRK 171 (463)
T ss_pred hhhhhhhhcCCchHHHHHHHHHHHHHHhcCC--ccHHHHHHHhcc-cceEEEEEecccCchH----------HHHHHHhh
Confidence 788887653 3467778899877766554 345555544322 5689999999999754 66777655
No 404
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=96.78 E-value=0.013 Score=52.22 Aligned_cols=73 Identities=12% Similarity=0.083 Sum_probs=44.1
Q ss_pred eeeCCccccceEEEEeC--CccEEEEecCC-----CCcchHHHHHHHHHHHHhcCCCCCccceeecccC-CCceEEEEec
Q 022304 28 CPVGGGCINLASRYGTD--AGSFFVKTNRS-----IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALP-TGGSYIIMEF 99 (299)
Q Consensus 28 ~~~~~G~~n~~y~v~~~--~g~~vlK~~~~-----~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~-~~~~~~v~e~ 99 (299)
+.++.|..+.+|++... +..+++|.... .....+..|...+..+..+ -.+.+++...... ....++++|+
T Consensus 13 ~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h--~ni~~~~~~~~~~~~~~~~lv~e~ 90 (337)
T cd07852 13 QKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDH--PNIVKLLNVIKAENDKDIYLVFEY 90 (337)
T ss_pred HhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCC--CCccceeeeeccCCCceEEEEecc
Confidence 45677777789998754 23788885532 1123356788888888443 2234444432221 2357999999
Q ss_pred ccC
Q 022304 100 IEF 102 (299)
Q Consensus 100 l~G 102 (299)
+++
T Consensus 91 ~~~ 93 (337)
T cd07852 91 MET 93 (337)
T ss_pred ccc
Confidence 975
No 405
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=96.75 E-value=0.0009 Score=57.01 Aligned_cols=71 Identities=17% Similarity=0.096 Sum_probs=45.9
Q ss_pred eeeCCccccceEEEEe-CCc-cEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCCccceeecc--c-CCC-ceEEE
Q 022304 28 CPVGGGCINLASRYGT-DAG-SFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGA--L-PTG-GSYII 96 (299)
Q Consensus 28 ~~~~~G~~n~~y~v~~-~~g-~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~--~-~~~-~~~~v 96 (299)
+.+|.|..+.+|++.. .+| .+.+|--.-+ .+..+..|..+|+.|.. |.++.+.. . .+. ..+++
T Consensus 25 ~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~H------pNIVqYy~~~f~~~~evlniv 98 (375)
T KOG0591|consen 25 KKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNH------PNIVQYYAHSFIEDNEVLNIV 98 (375)
T ss_pred HHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCC------chHHHHHHHhhhccchhhHHH
Confidence 5678899999999987 345 4555533221 24556789988888853 55654322 1 123 37899
Q ss_pred EecccCCC
Q 022304 97 MEFIEFGS 104 (299)
Q Consensus 97 ~e~l~G~~ 104 (299)
||+.++++
T Consensus 99 mE~c~~GD 106 (375)
T KOG0591|consen 99 MELCDAGD 106 (375)
T ss_pred HHhhcccC
Confidence 99998873
No 406
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=96.74 E-value=0.014 Score=51.80 Aligned_cols=73 Identities=11% Similarity=0.071 Sum_probs=44.1
Q ss_pred eeeCCccccceEEEEeCC---c-cEEEEecCCC--C---cchHHHHHHHHHHHHhcCCCCCccceeecccC---CCceEE
Q 022304 28 CPVGGGCINLASRYGTDA---G-SFFVKTNRSI--G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALP---TGGSYI 95 (299)
Q Consensus 28 ~~~~~G~~n~~y~v~~~~---g-~~vlK~~~~~--~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~---~~~~~~ 95 (299)
+.++.|..+.+|++.... + .|++|..... . ...+..|...++.+.++ -.+++.+...... ....++
T Consensus 6 ~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h--~~iv~~~~~~~~~~~~~~~~~~ 83 (332)
T cd07857 6 KELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGH--KNITCLYDMDIVFPGNFNELYL 83 (332)
T ss_pred EEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCC--CChheeeeeeeeccccCCcEEE
Confidence 457778788999998642 3 6888876531 1 12345688888887654 2344555432110 234677
Q ss_pred EEecccC
Q 022304 96 IMEFIEF 102 (299)
Q Consensus 96 v~e~l~G 102 (299)
++++..+
T Consensus 84 ~~e~~~~ 90 (332)
T cd07857 84 YEELMEA 90 (332)
T ss_pred EEecccC
Confidence 8887754
No 407
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=96.74 E-value=0.015 Score=49.76 Aligned_cols=75 Identities=17% Similarity=0.148 Sum_probs=48.8
Q ss_pred eeeeCCccccceEEEEeC------CccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEE
Q 022304 27 ICPVGGGCINLASRYGTD------AGSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII 96 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~~------~g~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v 96 (299)
...+|.|..+.||+.+.. ...++||...... ...+..|...++.+ ++ -.+.+++..... .+..+++
T Consensus 4 ~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l-~h--~ni~~~~g~~~~-~~~~~lv 79 (259)
T PF07714_consen 4 IKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKL-RH--PNIVKLYGFCIE-NEPLFLV 79 (259)
T ss_dssp EEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTH-SB--TTBE-EEEEEES-SSSEEEE
T ss_pred eeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccc-cc--cccccccccccc-ccccccc
Confidence 467888988899998876 2278889885421 24566777777777 33 245666655442 4568999
Q ss_pred EecccCCCC
Q 022304 97 MEFIEFGSS 105 (299)
Q Consensus 97 ~e~l~G~~~ 105 (299)
+|+.++.++
T Consensus 80 ~e~~~~g~L 88 (259)
T PF07714_consen 80 MEYCPGGSL 88 (259)
T ss_dssp EE--TTEBH
T ss_pred ccccccccc
Confidence 999987633
No 408
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=96.74 E-value=0.0096 Score=49.50 Aligned_cols=66 Identities=14% Similarity=0.028 Sum_probs=43.5
Q ss_pred cceEEEEeCC--ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEecccCCCC
Q 022304 36 NLASRYGTDA--GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSS 105 (299)
Q Consensus 36 n~~y~v~~~~--g~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~~~ 105 (299)
+.+|++...+ ..+++|+..... ...+..|...++.+.. .-+++++..... ....+++++++++..+
T Consensus 3 g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~---~~i~~~~~~~~~-~~~~~l~~e~~~~~~L 74 (244)
T smart00220 3 GKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKH---PNIVRLYDVFED-EDKLYLVMEYCDGGDL 74 (244)
T ss_pred eEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCC---CcHHHHHhheee-CCEEEEEEeCCCCCCH
Confidence 4678887754 478999987532 3456778887777732 234555544332 4678999999988633
No 409
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=96.73 E-value=0.015 Score=52.80 Aligned_cols=75 Identities=15% Similarity=0.065 Sum_probs=51.0
Q ss_pred eeeCCccccceEEEEeCC-c-cEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEec
Q 022304 28 CPVGGGCINLASRYGTDA-G-SFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 99 (299)
Q Consensus 28 ~~~~~G~~n~~y~v~~~~-g-~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~ 99 (299)
+.+|.|....||++.... | .|-+|+-... ....+..|+.+|+.|..+ -.+-+++..-++ ....+++||.
T Consensus 41 ~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~h--pniv~l~~~~e~-~~~~~lvmEL 117 (382)
T KOG0032|consen 41 RELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGH--PNIVQLKDAFED-PDSVYLVMEL 117 (382)
T ss_pred hhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCC--CCEEEEEEEEEc-CCeEEEEEEe
Confidence 678999999999998754 4 6777766431 125688999999999754 122222222222 4578999999
Q ss_pred ccCCCC
Q 022304 100 IEFGSS 105 (299)
Q Consensus 100 l~G~~~ 105 (299)
+.|+.+
T Consensus 118 ~~GGeL 123 (382)
T KOG0032|consen 118 CEGGEL 123 (382)
T ss_pred cCCchH
Confidence 998743
No 410
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=96.72 E-value=0.0085 Score=55.02 Aligned_cols=143 Identities=22% Similarity=0.230 Sum_probs=89.5
Q ss_pred eeeeCCccccceEEEEeCCc-cEEEEecCCC--CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEecccCC
Q 022304 27 ICPVGGGCINLASRYGTDAG-SFFVKTNRSI--GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFG 103 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~~~g-~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~ 103 (299)
+..+|.|....||.-.-+.. ++-+|.-... ....+.+|+.++..|+. -.+-++++.+.. ++..++||||++-+
T Consensus 211 ~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~m~~~~f~~Ea~iMk~L~H---~~lV~l~gV~~~-~~piyIVtE~m~~G 286 (468)
T KOG0197|consen 211 IRELGSGQFGEVWLGKWNGSTKVAVKTIKEGSMSPEAFLREAQIMKKLRH---EKLVKLYGVCTK-QEPIYIVTEYMPKG 286 (468)
T ss_pred HHHhcCCccceEEEEEEcCCCcccceEEeccccChhHHHHHHHHHHhCcc---cCeEEEEEEEec-CCceEEEEEecccC
Confidence 56788999899998877655 6667655432 23556799999999975 345667777653 34689999999876
Q ss_pred CCCCcHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCCCCHHHHHHHhhhHHHHHHHHhhcCChHHHHHHHHHH
Q 022304 104 SSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLM 183 (299)
Q Consensus 104 ~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (299)
. |-..|.. |.-.. .+ ... +.....++.
T Consensus 287 s-------Ll~yLr~-~~~~~-----------------------l~---------~~~-------------Ll~~a~qIa 313 (468)
T KOG0197|consen 287 S-------LLDYLRT-REGGL-----------------------LN---------LPQ-------------LLDFAAQIA 313 (468)
T ss_pred c-------HHHHhhh-cCCCc-----------------------cc---------hHH-------------HHHHHHHHH
Confidence 3 3334443 11000 00 000 112223333
Q ss_pred HHHhccccCCCCCcceeccCCCCCCeeecCCCCeEEEccc-c-ccCCchh
Q 022304 184 KNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA-C-YYGHNEA 231 (299)
Q Consensus 184 ~~l~~~l~~~~~~~~liHgDl~~~Nvl~~~~~~~~iID~~-~-~~g~~~~ 231 (299)
+.+. +|+ ...+||+||...||||+++....|=||. + ..++-+|
T Consensus 314 eGM~-YLe----s~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y 358 (468)
T KOG0197|consen 314 EGMA-YLE----SKNYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEY 358 (468)
T ss_pred HHHH-HHH----hCCccchhhhhhheeeccCceEEEcccccccccCCCce
Confidence 4333 343 4689999999999999988767788874 4 3444444
No 411
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=96.71 E-value=0.0033 Score=50.30 Aligned_cols=72 Identities=19% Similarity=0.118 Sum_probs=58.7
Q ss_pred eeeeCCccccceEEEEeCCccEEEEecCCC-CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEecccCCCC
Q 022304 27 ICPVGGGCINLASRYGTDAGSFFVKTNRSI-GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSS 105 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~~~g~~vlK~~~~~-~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~~~ 105 (299)
...++-|+.+.||...-.++..++|+.+.+ .+..++.|+.+|+-++.. ...|++|.++.. ++.|+|++|.++
T Consensus 27 ~~~L~KG~~s~Vyl~~~~~~~~a~Kvrr~ds~r~~l~kEakiLeil~g~--~~~p~vy~yg~~-----~i~me~i~G~~L 99 (201)
T COG2112 27 EKELAKGTTSVVYLGEWRGGEVALKVRRRDSPRRNLEKEAKILEILAGE--GVTPEVYFYGED-----FIRMEYIDGRPL 99 (201)
T ss_pred hhhhhcccccEEEEeeccCceEEEEEecCCcchhhHHHHHHHHHHhhhc--CCCceEEEechh-----hhhhhhhcCcch
Confidence 455778888899999888888999998764 456789999999999764 468999999754 777999999865
No 412
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=96.69 E-value=0.014 Score=52.10 Aligned_cols=74 Identities=15% Similarity=0.152 Sum_probs=44.1
Q ss_pred eeeeeCCccccceEEEEeC--CccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCCccceeecccC----CCceE
Q 022304 26 KICPVGGGCINLASRYGTD--AGSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP----TGGSY 94 (299)
Q Consensus 26 ~~~~~~~G~~n~~y~v~~~--~g~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~----~~~~~ 94 (299)
-...++.|..+.+|++... +..+++|..... ....+..|..+++.+... .+.+++...... ....+
T Consensus 9 ~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~---ni~~~~~~~~~~~~~~~~~~~ 85 (337)
T cd07858 9 PIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHE---NVIAIKDIMPPPHREAFNDVY 85 (337)
T ss_pred EEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCC---CccchHHheecccccccCcEE
Confidence 3557888888899998763 237888876431 122345677777777432 233333221110 13479
Q ss_pred EEEecccC
Q 022304 95 IIMEFIEF 102 (299)
Q Consensus 95 ~v~e~l~G 102 (299)
++++++.+
T Consensus 86 lv~e~~~~ 93 (337)
T cd07858 86 IVYELMDT 93 (337)
T ss_pred EEEeCCCC
Confidence 99999865
No 413
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=96.68 E-value=0.032 Score=47.44 Aligned_cols=27 Identities=22% Similarity=0.139 Sum_probs=23.5
Q ss_pred cceeccCCCCCCeeecCCCCeEEEccc
Q 022304 197 PCLLHGDLWSGNISSDKNGEPVILDPA 223 (299)
Q Consensus 197 ~~liHgDl~~~Nvl~~~~~~~~iID~~ 223 (299)
..++|+|++|.||++++++...++|+.
T Consensus 117 ~~i~H~dlk~~nili~~~~~~kl~dfg 143 (262)
T cd05058 117 KKFVHRDLAARNCMLDESFTVKVADFG 143 (262)
T ss_pred CCccccccCcceEEEcCCCcEEECCcc
Confidence 479999999999999988777888964
No 414
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=96.64 E-value=0.026 Score=50.16 Aligned_cols=75 Identities=15% Similarity=0.182 Sum_probs=54.9
Q ss_pred eeeeeCCccccceEEEEeCCc---cEEEEecCCC---CcchHHHHHHHHHHHHh-cCCCCCccceeecccCCCceEEEEe
Q 022304 26 KICPVGGGCINLASRYGTDAG---SFFVKTNRSI---GPSMFEGEALGLGAMYE-TRTIRAPRPFKVGALPTGGSYIIME 98 (299)
Q Consensus 26 ~~~~~~~G~~n~~y~v~~~~g---~~vlK~~~~~---~~~~~~~E~~~l~~L~~-~~~~~vP~~~~~~~~~~~~~~~v~e 98 (299)
-...+|.|..+.+|.+..... .+++|..... ....+..|..++..+.. .....+|+++..+....+..|+||+
T Consensus 22 i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~iVM~ 101 (322)
T KOG1164|consen 22 LGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFIVMS 101 (322)
T ss_pred EeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEEEEe
Confidence 346788898999999987543 5888887642 12268899999999985 2245789999888421567899988
Q ss_pred cc
Q 022304 99 FI 100 (299)
Q Consensus 99 ~l 100 (299)
-+
T Consensus 102 l~ 103 (322)
T KOG1164|consen 102 LL 103 (322)
T ss_pred cc
Confidence 65
No 415
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=96.60 E-value=0.0091 Score=50.86 Aligned_cols=74 Identities=16% Similarity=0.167 Sum_probs=44.0
Q ss_pred eeeCCccccceEEEEeCC-c--------cEEEEecCCCCc---chHHHHHHHHHHHHhcCCCCCccceeecccCCCceEE
Q 022304 28 CPVGGGCINLASRYGTDA-G--------SFFVKTNRSIGP---SMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI 95 (299)
Q Consensus 28 ~~~~~G~~n~~y~v~~~~-g--------~~vlK~~~~~~~---~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~ 95 (299)
+.+|.|..+.||++.... + ++++|....... ..+..|...++.+.. -.+.+++..... ....++
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h---~~iv~~~~~~~~-~~~~~l 76 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSH---KHLVLNYGVCVC-GDESIM 76 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCC---CChhheeeEEEe-CCCcEE
Confidence 357778788999987532 1 366676643221 234556666655532 234445544332 457899
Q ss_pred EEecccCCCC
Q 022304 96 IMEFIEFGSS 105 (299)
Q Consensus 96 v~e~l~G~~~ 105 (299)
+|||++|..+
T Consensus 77 v~e~~~~g~L 86 (258)
T cd05078 77 VQEYVKFGSL 86 (258)
T ss_pred EEecCCCCcH
Confidence 9999998744
No 416
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=96.59 E-value=0.037 Score=47.63 Aligned_cols=75 Identities=12% Similarity=0.058 Sum_probs=47.2
Q ss_pred eeeeCCccccceEEEEeCC------ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEE
Q 022304 27 ICPVGGGCINLASRYGTDA------GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII 96 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~~~------g~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v 96 (299)
.+.++.|....||+....+ ..+++|...... ...+..|...++.|. + ..+.+++..........+++
T Consensus 11 ~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~-h--~ni~~~~~~~~~~~~~~~~~ 87 (280)
T cd05043 11 SDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLS-H--QNILPILHVCIEDGEPPFVL 87 (280)
T ss_pred eeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCC-C--CCCCeEEEEEecCCCCCEEE
Confidence 3567788888999987643 367888765421 233556777777663 2 33455555433213577899
Q ss_pred EecccCCC
Q 022304 97 MEFIEFGS 104 (299)
Q Consensus 97 ~e~l~G~~ 104 (299)
+++.++..
T Consensus 88 ~~~~~~~~ 95 (280)
T cd05043 88 YPYMNWGN 95 (280)
T ss_pred EEcCCCCc
Confidence 99988763
No 417
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=96.52 E-value=0.021 Score=52.93 Aligned_cols=69 Identities=16% Similarity=0.114 Sum_probs=47.4
Q ss_pred eeeCCccccceEEEEe-CCc-cEEEEecCC-----CCcchHHHHHHHHHHHHhcCCCCCcccee---ecccCCCceEEEE
Q 022304 28 CPVGGGCINLASRYGT-DAG-SFFVKTNRS-----IGPSMFEGEALGLGAMYETRTIRAPRPFK---VGALPTGGSYIIM 97 (299)
Q Consensus 28 ~~~~~G~~n~~y~v~~-~~g-~~vlK~~~~-----~~~~~~~~E~~~l~~L~~~~~~~vP~~~~---~~~~~~~~~~~v~ 97 (299)
+-+|.|+...||--.- ..| .+.+|+-.+ .....++.|+++|+.+.. |.++- ..++ ..+.|.||
T Consensus 570 evLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~H------PGiV~le~M~ET-~ervFVVM 642 (888)
T KOG4236|consen 570 EVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHH------PGIVNLECMFET-PERVFVVM 642 (888)
T ss_pred hhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCC------CCeeEEEEeecC-CceEEEEe
Confidence 4578888888887443 334 677776542 234678999999998864 33332 2223 57899999
Q ss_pred ecccCC
Q 022304 98 EFIEFG 103 (299)
Q Consensus 98 e~l~G~ 103 (299)
|.+.|.
T Consensus 643 EKl~GD 648 (888)
T KOG4236|consen 643 EKLHGD 648 (888)
T ss_pred hhhcch
Confidence 999995
No 418
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=96.47 E-value=0.022 Score=58.29 Aligned_cols=73 Identities=19% Similarity=0.230 Sum_probs=47.5
Q ss_pred eeeCCccccceEEEEeC-Cc-cEEEEecCCCCcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEecccCCCC
Q 022304 28 CPVGGGCINLASRYGTD-AG-SFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSS 105 (299)
Q Consensus 28 ~~~~~G~~n~~y~v~~~-~g-~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~~~ 105 (299)
..++.|....||+.... ++ .+++|...... .....|++.++.+. | --+.+++.+... .+..+++|||++|..+
T Consensus 696 ~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~l~~l~-H--pnIv~~~~~~~~-~~~~~lv~Ey~~~g~L 770 (968)
T PLN00113 696 NVISRGKKGASYKGKSIKNGMQFVVKEINDVN-SIPSSEIADMGKLQ-H--PNIVKLIGLCRS-EKGAYLIHEYIEGKNL 770 (968)
T ss_pred cEEccCCCeeEEEEEECCCCcEEEEEEccCCc-cccHHHHHHHhhCC-C--CCcceEEEEEEc-CCCCEEEEeCCCCCcH
Confidence 45788888899999863 34 78888765321 22245666666553 2 245666665543 4678999999998744
No 419
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=96.47 E-value=0.014 Score=55.32 Aligned_cols=73 Identities=15% Similarity=0.141 Sum_probs=46.8
Q ss_pred eeCCccccceEEEEe--CCccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEecc
Q 022304 29 PVGGGCINLASRYGT--DAGSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI 100 (299)
Q Consensus 29 ~~~~G~~n~~y~v~~--~~g~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l 100 (299)
.+|.|.++.|=..+. ++....+|+-+.. ....+++|+-+++.|.. -.|-++|..... ...-|+++||+
T Consensus 19 TLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~H---pnVl~LydVwe~-~~~lylvlEyv 94 (786)
T KOG0588|consen 19 TLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEH---PNVLRLYDVWEN-KQHLYLVLEYV 94 (786)
T ss_pred cccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcC---CCeeeeeeeecc-CceEEEEEEec
Confidence 355565554333222 1236677877542 25678999999999964 255666655443 45789999999
Q ss_pred cCCCC
Q 022304 101 EFGSS 105 (299)
Q Consensus 101 ~G~~~ 105 (299)
+|+.+
T Consensus 95 ~gGEL 99 (786)
T KOG0588|consen 95 PGGEL 99 (786)
T ss_pred CCchh
Confidence 99743
No 420
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=96.44 E-value=0.016 Score=51.87 Aligned_cols=78 Identities=13% Similarity=0.037 Sum_probs=49.3
Q ss_pred ceeeeeeeCCccccceEEEEeC----Cc-cEEEEe-cCCCCcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEE
Q 022304 23 HITKICPVGGGCINLASRYGTD----AG-SFFVKT-NRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII 96 (299)
Q Consensus 23 ~~~~~~~~~~G~~n~~y~v~~~----~g-~~vlK~-~~~~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v 96 (299)
...-+.++|.|..+.||.-+.- .+ .+-+|- .....+..+..|.+.|..+..+ --+-.+...-.- .+...++
T Consensus 37 ~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~p~ri~~El~~L~~~gG~--~ni~~~~~~~rn-nd~v~iv 113 (418)
T KOG1167|consen 37 AYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSSPSRILNELEMLYRLGGS--DNIIKLNGCFRN-NDQVAIV 113 (418)
T ss_pred hhhhhccccccchhhhhhhhHhhhccccceEeeeecccccCchHHHHHHHHHHHhccc--hhhhcchhhhcc-CCeeEEE
Confidence 3445788999988888885542 22 444554 4445567789999988888653 223323322221 5788999
Q ss_pred EecccCC
Q 022304 97 MEFIEFG 103 (299)
Q Consensus 97 ~e~l~G~ 103 (299)
++|++-.
T Consensus 114 lp~~~H~ 120 (418)
T KOG1167|consen 114 LPYFEHD 120 (418)
T ss_pred ecccCcc
Confidence 9998654
No 421
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=96.44 E-value=0.038 Score=50.17 Aligned_cols=70 Identities=11% Similarity=0.129 Sum_probs=46.9
Q ss_pred eeeCCccccceEEEEe-CCc-cEEEEecC-C---CCcchHHHHHHHHHHHHhcCCCCCccceeecc-cC-CCceEEEEec
Q 022304 28 CPVGGGCINLASRYGT-DAG-SFFVKTNR-S---IGPSMFEGEALGLGAMYETRTIRAPRPFKVGA-LP-TGGSYIIMEF 99 (299)
Q Consensus 28 ~~~~~G~~n~~y~v~~-~~g-~~vlK~~~-~---~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~-~~-~~~~~~v~e~ 99 (299)
+.+|.|.+..||+... ..+ .+-+|+.. . .....+++|...++.+.. |.++.+.. +. +..-|+||.+
T Consensus 32 e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~H------PNIv~~~~sFvv~~~LWvVmpf 105 (516)
T KOG0582|consen 32 EVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDH------PNIVTYHCSFVVDSELWVVMPF 105 (516)
T ss_pred EEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCC------CCcceEEEEEEecceeEEeehh
Confidence 6788898888999776 333 55667664 1 223567888887766642 66664322 11 4678999999
Q ss_pred ccCC
Q 022304 100 IEFG 103 (299)
Q Consensus 100 l~G~ 103 (299)
+.|+
T Consensus 106 Ma~G 109 (516)
T KOG0582|consen 106 MAGG 109 (516)
T ss_pred hcCC
Confidence 9987
No 422
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=96.44 E-value=0.052 Score=51.27 Aligned_cols=27 Identities=22% Similarity=0.318 Sum_probs=23.9
Q ss_pred cceeccCCCCCCeeecCCCCeEEEccc
Q 022304 197 PCLLHGDLWSGNISSDKNGEPVILDPA 223 (299)
Q Consensus 197 ~~liHgDl~~~Nvl~~~~~~~~iID~~ 223 (299)
..++|+|++|.|||++.++...|+|+.
T Consensus 328 ~~ivHrDLKp~NILl~~~~~~kL~DFG 354 (507)
T PLN03224 328 IGIVHRDIKPENLLVTVDGQVKIIDFG 354 (507)
T ss_pred CCeecCCCchHhEEECCCCcEEEEeCc
Confidence 469999999999999888878899974
No 423
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=96.41 E-value=0.029 Score=52.63 Aligned_cols=72 Identities=14% Similarity=0.118 Sum_probs=44.3
Q ss_pred eeeCCccccceEEEEe--CCccEEEEecCCCC-----cchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEecc
Q 022304 28 CPVGGGCINLASRYGT--DAGSFFVKTNRSIG-----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI 100 (299)
Q Consensus 28 ~~~~~G~~n~~y~v~~--~~g~~vlK~~~~~~-----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l 100 (299)
..++.|....|...+. ..+.+.+|+..... +..+.+|.+++..|.. -.+-+++..-.+ ....|+||||.
T Consensus 62 ~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~H---PnIvkl~~v~~t-~~~lylV~eya 137 (596)
T KOG0586|consen 62 KTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNH---PNIVKLFSVIET-EATLYLVMEYA 137 (596)
T ss_pred eeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCC---cceeeeeeeeee-cceeEEEEEec
Confidence 3456665555555554 24488899886532 2335678888877753 123344444333 56789999999
Q ss_pred cCC
Q 022304 101 EFG 103 (299)
Q Consensus 101 ~G~ 103 (299)
.|+
T Consensus 138 ~~g 140 (596)
T KOG0586|consen 138 SGG 140 (596)
T ss_pred cCc
Confidence 886
No 424
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=96.39 E-value=0.033 Score=47.28 Aligned_cols=37 Identities=24% Similarity=0.399 Sum_probs=29.7
Q ss_pred CcceeccCCCCCCeeecCCCCeEEEccc-c-ccCCchhh
Q 022304 196 EPCLLHGDLWSGNISSDKNGEPVILDPA-C-YYGHNEAE 232 (299)
Q Consensus 196 ~~~liHgDl~~~Nvl~~~~~~~~iID~~-~-~~g~~~~D 232 (299)
..-++|+|++|+|+|++.+|+..|=||. + .+|.|-.-
T Consensus 119 ~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~ 157 (318)
T KOG0659|consen 119 SKWILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNRI 157 (318)
T ss_pred hhhhhcccCCccceEEcCCCcEEeecccchhccCCCCcc
Confidence 3578999999999999999988999984 4 57755433
No 425
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=96.32 E-value=0.0092 Score=55.85 Aligned_cols=86 Identities=15% Similarity=0.086 Sum_probs=61.1
Q ss_pred HHhcCCCcceeeeeeeCCccccceEEEEeCCc-cEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCCccceeecccC
Q 022304 15 ILSEGKATHITKICPVGGGCINLASRYGTDAG-SFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP 89 (299)
Q Consensus 15 l~~~~~~~~~~~~~~~~~G~~n~~y~v~~~~g-~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~ 89 (299)
|+++ +-...+=.+++|.|....+-.+++..+ .+.+|+-++. .+..+.+|+.+|..|+. -.+.+++..+..
T Consensus 532 l~Ef-PRs~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkh---PNIveLvGVC~~- 606 (807)
T KOG1094|consen 532 LVEF-PRSRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKH---PNIVELLGVCVQ- 606 (807)
T ss_pred hhhc-chhheehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCC---CCeeEEEeeeec-
Confidence 3444 444555678999999999999998876 7778887753 34667889988888842 345666666543
Q ss_pred CCceEEEEecccCCCC
Q 022304 90 TGGSYIIMEFIEFGSS 105 (299)
Q Consensus 90 ~~~~~~v~e~l~G~~~ 105 (299)
+...++++||.+.+.+
T Consensus 607 DePicmI~EYmEnGDL 622 (807)
T KOG1094|consen 607 DDPLCMITEYMENGDL 622 (807)
T ss_pred CCchHHHHHHHhcCcH
Confidence 4567899999987543
No 426
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=96.32 E-value=0.058 Score=48.16 Aligned_cols=75 Identities=15% Similarity=0.059 Sum_probs=44.3
Q ss_pred eeeeeeeCCccccceEEEEeC--CccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCCccceeecccC-----CC
Q 022304 24 ITKICPVGGGCINLASRYGTD--AGSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP-----TG 91 (299)
Q Consensus 24 ~~~~~~~~~G~~n~~y~v~~~--~g~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~-----~~ 91 (299)
......++.|..+.+|++... +..+++|..... ....+..|..+++.+... .+.+++...... ..
T Consensus 17 y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~---niv~~~~~~~~~~~~~~~~ 93 (342)
T cd07879 17 YTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHE---NVIGLLDVFTSAVSGDEFQ 93 (342)
T ss_pred eEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCC---CccchhheecccccCCCCc
Confidence 334677888888899998753 337888876431 112356788888777532 233333322110 12
Q ss_pred ceEEEEeccc
Q 022304 92 GSYIIMEFIE 101 (299)
Q Consensus 92 ~~~~v~e~l~ 101 (299)
..+++++++.
T Consensus 94 ~~~lv~e~~~ 103 (342)
T cd07879 94 DFYLVMPYMQ 103 (342)
T ss_pred eEEEEecccc
Confidence 4588888874
No 427
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=96.25 E-value=0.046 Score=48.83 Aligned_cols=79 Identities=15% Similarity=0.108 Sum_probs=48.1
Q ss_pred CcceeeeeeeCCccccceEEEEeC--CccEEEEecCCC---CcchHHHHHHHHHHHHhcCCCCCccceeecccC------
Q 022304 21 ATHITKICPVGGGCINLASRYGTD--AGSFFVKTNRSI---GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP------ 89 (299)
Q Consensus 21 ~~~~~~~~~~~~G~~n~~y~v~~~--~g~~vlK~~~~~---~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~------ 89 (299)
+....-+++++.|..+.+|++... +..+++|..... ....+..|++.++.+.. ..+.+++......
T Consensus 4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h---~~i~~~~~~~~~~~~~~~~ 80 (342)
T cd07854 4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDH---DNIVKVYEVLGPSGSDLTE 80 (342)
T ss_pred CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCC---CcchhhHhhhccccccccc
Confidence 345556788998888999998763 237888876432 22345678888877743 1233333221110
Q ss_pred -------CCceEEEEecccC
Q 022304 90 -------TGGSYIIMEFIEF 102 (299)
Q Consensus 90 -------~~~~~~v~e~l~G 102 (299)
....++++||+++
T Consensus 81 ~~~~~~~~~~~~lv~e~~~~ 100 (342)
T cd07854 81 DVGSLTELNSVYIVQEYMET 100 (342)
T ss_pred ccccccccceEEEEeecccc
Confidence 1346889998865
No 428
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=96.24 E-value=0.037 Score=49.47 Aligned_cols=27 Identities=33% Similarity=0.438 Sum_probs=23.9
Q ss_pred cceeccCCCCCCeeecCCCCeEEEccc
Q 022304 197 PCLLHGDLWSGNISSDKNGEPVILDPA 223 (299)
Q Consensus 197 ~~liHgDl~~~Nvl~~~~~~~~iID~~ 223 (299)
.+++|+|++|.||++++++.+.|+|+.
T Consensus 137 ~gi~H~dlkp~Nill~~~~~~kL~dfg 163 (343)
T cd07851 137 AGIIHRDLKPSNIAVNEDCELKILDFG 163 (343)
T ss_pred CCeecCCCCHHHeEECCCCCEEEcccc
Confidence 469999999999999988888899974
No 429
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=96.21 E-value=0.014 Score=58.37 Aligned_cols=81 Identities=14% Similarity=0.142 Sum_probs=44.3
Q ss_pred cceeeeee-eCCccccceEEEEeCCc-cEEEEecCCCCcchHHHHHHHHHHHHhcCCCCCccceeecccC--CCceEEEE
Q 022304 22 THITKICP-VGGGCINLASRYGTDAG-SFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALP--TGGSYIIM 97 (299)
Q Consensus 22 ~~~~~~~~-~~~G~~n~~y~v~~~~g-~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~--~~~~~~v~ 97 (299)
..-..|.. +|.|....||+.+..+| .++||+..+.....+..=.+++..|.. --.|-+..+.... .....+++
T Consensus 697 ~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~WEfYI~~q~~~RLk~---~~~~~~~~~~~a~~~~~~S~lv~ 773 (974)
T KOG1166|consen 697 GEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPWEFYICLQVMERLKP---QMLPSIMHISSAHVFQNASVLVS 773 (974)
T ss_pred ceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCceeeeehHHHHHhhch---hhhcchHHHHHHHccCCcceeee
Confidence 34445644 68888899999998877 788899876433222111222233320 0112222221111 35678899
Q ss_pred ecccCCCC
Q 022304 98 EFIEFGSS 105 (299)
Q Consensus 98 e~l~G~~~ 105 (299)
+|.+-+.+
T Consensus 774 ey~~~Gtl 781 (974)
T KOG1166|consen 774 EYSPYGTL 781 (974)
T ss_pred eccccccH
Confidence 98876543
No 430
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=96.13 E-value=0.062 Score=50.50 Aligned_cols=140 Identities=16% Similarity=0.129 Sum_probs=82.0
Q ss_pred eeeeeeeCCccccceEEEEeCCc--cEEEEecCCC-----------CcchHHHHHHHHHHHHhcCCCCCccceeecccCC
Q 022304 24 ITKICPVGGGCINLASRYGTDAG--SFFVKTNRSI-----------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPT 90 (299)
Q Consensus 24 ~~~~~~~~~G~~n~~y~v~~~~g--~~vlK~~~~~-----------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~ 90 (299)
-+.++++|.|....|+...-.+. .+|+|+-.+. -...+-.|+++|..|.++.--.+-+++.+-+. +
T Consensus 563 yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEd-d 641 (772)
T KOG1152|consen 563 YTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFED-D 641 (772)
T ss_pred ceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeec-C
Confidence 45688999999999888776544 6788876431 11335689999999987644344555543221 3
Q ss_pred CceEEEEecccCCCCCCcHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCCCCHHHHHHHhhhHHHHHHHHhhc
Q 022304 91 GGSYIIMEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQY 170 (299)
Q Consensus 91 ~~~~~v~e~l~G~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (299)
+..|+++| ..|...+ . |.+ +...| ++.+..
T Consensus 642 d~yyl~te-~hg~gID--L-------------------Fd~-----IE~kp----------------~m~E~e------- 671 (772)
T KOG1152|consen 642 DYYYLETE-VHGEGID--L-------------------FDF-----IEFKP----------------RMDEPE------- 671 (772)
T ss_pred CeeEEEec-CCCCCcc--h-------------------hhh-----hhccC----------------ccchHH-------
Confidence 45555555 4444321 0 110 00000 010000
Q ss_pred CChHHHHHHHHHHHHHhccccCCCCCcceeccCCCCCCeeecCCCCeEEEccc
Q 022304 171 GDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA 223 (299)
Q Consensus 171 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~liHgDl~~~Nvl~~~~~~~~iID~~ 223 (299)
....+.++.+.++.+ -...++|+|++-.||+++.+|-..+|||.
T Consensus 672 ----Ak~IFkQV~agi~hl-----h~~~ivhrdikdenvivd~~g~~klidfg 715 (772)
T KOG1152|consen 672 ----AKLIFKQVVAGIKHL-----HDQGIVHRDIKDENVIVDSNGFVKLIDFG 715 (772)
T ss_pred ----HHHHHHHHHhccccc-----cccCceecccccccEEEecCCeEEEeecc
Confidence 011223333333332 25689999999999999988878899984
No 431
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=96.12 E-value=0.14 Score=46.68 Aligned_cols=77 Identities=14% Similarity=0.085 Sum_probs=50.4
Q ss_pred ceeeeeeeCCccccceEEEEeCCccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCCccce---eecccCC---CceEEE
Q 022304 23 HITKICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPF---KVGALPT---GGSYII 96 (299)
Q Consensus 23 ~~~~~~~~~~G~~n~~y~v~~~~g~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~~~vP~~~---~~~~~~~---~~~~~v 96 (299)
+|+=++.+|.|-...|||-.-.++.+.||++.......-.+|.++++..= +.-+.++ +.|..+. .+-|++
T Consensus 212 qI~L~e~IGkGRyGEVwrG~wrGe~VAVKiF~srdE~SWfrEtEIYqTvm----LRHENILgFIaaD~~~~gs~TQLwLv 287 (513)
T KOG2052|consen 212 QIVLQEIIGKGRFGEVWRGRWRGEDVAVKIFSSRDERSWFRETEIYQTVM----LRHENILGFIAADNKDNGSWTQLWLV 287 (513)
T ss_pred eeEEEEEecCccccceeeccccCCceEEEEecccchhhhhhHHHHHHHHH----hccchhhhhhhccccCCCceEEEEEe
Confidence 45557889999999999988888899999998744334457777776542 2223344 3333222 355777
Q ss_pred EecccCC
Q 022304 97 MEFIEFG 103 (299)
Q Consensus 97 ~e~l~G~ 103 (299)
.+|=+-+
T Consensus 288 TdYHe~G 294 (513)
T KOG2052|consen 288 TDYHEHG 294 (513)
T ss_pred eecccCC
Confidence 7776544
No 432
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=96.09 E-value=0.038 Score=51.97 Aligned_cols=136 Identities=18% Similarity=0.121 Sum_probs=83.0
Q ss_pred ceeeeeeeCCccccceEEEEeCCccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEE
Q 022304 23 HITKICPVGGGCINLASRYGTDAGSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM 97 (299)
Q Consensus 23 ~~~~~~~~~~G~~n~~y~v~~~~g~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~ 97 (299)
++.-.++||.|....|||-.-. |.+.||+..-+ ....++.|+.+|+.=+.. =-+++.+..-.....++.
T Consensus 393 ev~l~~rIGsGsFGtV~Rg~wh-GdVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~-----NIlLFMG~~~~p~~AIiT 466 (678)
T KOG0193|consen 393 EVLLGERIGSGSFGTVYRGRWH-GDVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHE-----NILLFMGACMNPPLAIIT 466 (678)
T ss_pred Hhhccceeccccccceeecccc-cceEEEEEecCCCCHHHHHHHHHHHHHHhhcchh-----hheeeehhhcCCceeeee
Confidence 4445678999999999997654 67888877532 235577788877655432 224444433234448999
Q ss_pred ecccCCCCCCcHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCCCCHHHHHHHhhhHHHHHHHHhhcCChHHHH
Q 022304 98 EFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQ 177 (299)
Q Consensus 98 e~l~G~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (299)
.|++|..+- ..+|..... |-+. .. .+
T Consensus 467 qwCeGsSLY----------~hlHv~etk---------------------------fdm~----~~-------------id 492 (678)
T KOG0193|consen 467 QWCEGSSLY----------THLHVQETK---------------------------FDMN----TT-------------ID 492 (678)
T ss_pred hhccCchhh----------hhccchhhh---------------------------hhHH----HH-------------HH
Confidence 999997552 233433311 1011 00 11
Q ss_pred HHHHHHHHHhccccCCCCCcceeccCCCCCCeeecCCCCeEEEccc
Q 022304 178 RGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA 223 (299)
Q Consensus 178 ~~~~~~~~l~~~l~~~~~~~~liHgDl~~~Nvl~~~~~~~~iID~~ 223 (299)
..+++.+.+. +|. ...+||.||+..||++.+++.+.|-||.
T Consensus 493 IAqQiaqGM~-YLH----AK~IIHrDLKSnNIFl~~~~kVkIgDFG 533 (678)
T KOG0193|consen 493 IAQQIAQGMD-YLH----AKNIIHRDLKSNNIFLHEDLKVKIGDFG 533 (678)
T ss_pred HHHHHHHhhh-hhh----hhhhhhhhccccceEEccCCcEEEeccc
Confidence 2233333333 333 3589999999999999887778888874
No 433
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=96.07 E-value=0.12 Score=46.18 Aligned_cols=27 Identities=30% Similarity=0.409 Sum_probs=23.9
Q ss_pred cceeccCCCCCCeeecCCCCeEEEccc
Q 022304 197 PCLLHGDLWSGNISSDKNGEPVILDPA 223 (299)
Q Consensus 197 ~~liHgDl~~~Nvl~~~~~~~~iID~~ 223 (299)
.+++|+|++|.||++++++...|+|+.
T Consensus 139 ~~ivH~dlkp~NIll~~~~~~kl~dfg 165 (345)
T cd07877 139 ADIIHRDLKPSNLAVNEDCELKILDFG 165 (345)
T ss_pred CCeeecCCChHHEEEcCCCCEEEeccc
Confidence 469999999999999988878899974
No 434
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=96.02 E-value=0.054 Score=52.09 Aligned_cols=27 Identities=26% Similarity=0.334 Sum_probs=22.8
Q ss_pred cceeccCCCCCCeeecC-CCCeEEEccc
Q 022304 197 PCLLHGDLWSGNISSDK-NGEPVILDPA 223 (299)
Q Consensus 197 ~~liHgDl~~~Nvl~~~-~~~~~iID~~ 223 (299)
..++|+|++|.|||++. ++...|+||.
T Consensus 274 ~gIiHRDLKP~NILl~~~~~~~KL~DFG 301 (566)
T PLN03225 274 TGIVHRDVKPQNIIFSEGSGSFKIIDLG 301 (566)
T ss_pred CCEEeCcCCHHHEEEeCCCCcEEEEeCC
Confidence 47999999999999985 3567899974
No 435
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=95.98 E-value=0.012 Score=49.51 Aligned_cols=141 Identities=17% Similarity=0.179 Sum_probs=78.1
Q ss_pred eeeeCCccccceEEEEe--CCccEEEEecCC---CCcchHHHHHHHHHHHHhcCCCCCccceeecccC----CCceEEEE
Q 022304 27 ICPVGGGCINLASRYGT--DAGSFFVKTNRS---IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALP----TGGSYIIM 97 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~--~~g~~vlK~~~~---~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~----~~~~~~v~ 97 (299)
.+.++.|..+.+|.|+. +++.|.+|.--. ...+...+|++..+.+.. -.|-+++.+.-.+ ....|+++
T Consensus 26 ~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s---~~vl~l~dh~l~~~~D~~~~~yll~ 102 (302)
T KOG2345|consen 26 QRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNS---PNVLRLVDHQLREEKDGKHEAYLLL 102 (302)
T ss_pred eeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCC---cchHHHHHHHHHhhccCceeEEEEe
Confidence 35678888899999984 445788875432 233455677777766643 1222233221111 23467777
Q ss_pred ecccCCCCCCcHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCCCCHHHHHHHhhhHHHHHHHHhhcCChHHHH
Q 022304 98 EFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQ 177 (299)
Q Consensus 98 e~l~G~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (299)
.|-.-+ .+.+.+.++ ... |. ++.+.+ ...
T Consensus 103 Pyy~~G-------sl~d~i~~~---k~k------------g~-------------~~sE~~----------------iL~ 131 (302)
T KOG2345|consen 103 PYYKRG-------SLLDEIERL---KIK------------GN-------------FVSEAQ----------------ILW 131 (302)
T ss_pred ehhccc-------cHHHHHHHH---hhc------------CC-------------ccCHHH----------------HHH
Confidence 765332 122222222 110 00 000001 122
Q ss_pred HHHHHHHHHhccccCCCCCcceeccCCCCCCeeecCCCCeEEEcccc
Q 022304 178 RGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPAC 224 (299)
Q Consensus 178 ~~~~~~~~l~~~l~~~~~~~~liHgDl~~~Nvl~~~~~~~~iID~~~ 224 (299)
.+..+.+.++.+.. ..+...|+|++|+|||+++.+.+.++|+..
T Consensus 132 if~gic~gL~~lH~---~~~~yAH~DiKP~NILls~~~~~vl~D~GS 175 (302)
T KOG2345|consen 132 IFLGICRGLEALHE---KEPPYAHRDIKPANILLSDSGLPVLMDLGS 175 (302)
T ss_pred HHHHHHHHHHHHhc---cCCcccccCCCcceeEecCCCceEEEeccC
Confidence 33445555555443 456899999999999999878899999853
No 436
>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].
Probab=95.92 E-value=0.17 Score=41.62 Aligned_cols=76 Identities=13% Similarity=0.002 Sum_probs=50.1
Q ss_pred eeeeeCCccccceEEEEeCCccEEEEecCCCC-------------------cchHHHHHHHHHHHH-hcC--CCCCccce
Q 022304 26 KICPVGGGCINLASRYGTDAGSFFVKTNRSIG-------------------PSMFEGEALGLGAMY-ETR--TIRAPRPF 83 (299)
Q Consensus 26 ~~~~~~~G~~n~~y~v~~~~g~~vlK~~~~~~-------------------~~~~~~E~~~l~~L~-~~~--~~~vP~~~ 83 (299)
...+++.|..-.+|.-- .+...++|+..+.. .....+|..-+..|. ... ..++|+.+
T Consensus 5 ~~~~i~~G~~R~cy~HP-~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~~ 83 (199)
T PF10707_consen 5 ESDLIAQGGERDCYQHP-DDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRFY 83 (199)
T ss_pred CCcccccCCCceEEECC-CCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccEe
Confidence 44567777655566542 23467888876543 345677888888887 432 34688888
Q ss_pred eecccCCCceEEEEecccCC
Q 022304 84 KVGALPTGGSYIIMEFIEFG 103 (299)
Q Consensus 84 ~~~~~~~~~~~~v~e~l~G~ 103 (299)
....+ +-+..+++|.+...
T Consensus 84 G~veT-~~G~Glv~e~I~d~ 102 (199)
T PF10707_consen 84 GFVET-NLGLGLVVELIRDA 102 (199)
T ss_pred EEEec-CCceEEEEEEEECC
Confidence 88776 55678888888654
No 437
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=95.78 E-value=0.051 Score=46.13 Aligned_cols=74 Identities=14% Similarity=-0.042 Sum_probs=41.8
Q ss_pred eeeCCccccceEEEEeCCc--cEEEEecCC----C----CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEE
Q 022304 28 CPVGGGCINLASRYGTDAG--SFFVKTNRS----I----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM 97 (299)
Q Consensus 28 ~~~~~G~~n~~y~v~~~~g--~~vlK~~~~----~----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~ 97 (299)
+.++.|..+.+|++..... .+.+|+... . .......|..+++.+.. -.+++++..... ....++++
T Consensus 6 ~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~lv~ 81 (260)
T cd08222 6 QRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDH---PAIVKFHASFLE-RDAFCIIT 81 (260)
T ss_pred eeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCC---CcHHHHHHHHhc-CCceEEEE
Confidence 5678888889999876432 344444321 1 11123456666655532 123444433222 45789999
Q ss_pred ecccCCCC
Q 022304 98 EFIEFGSS 105 (299)
Q Consensus 98 e~l~G~~~ 105 (299)
|+++|..+
T Consensus 82 e~~~~~~l 89 (260)
T cd08222 82 EYCEGRDL 89 (260)
T ss_pred EeCCCCCH
Confidence 99998743
No 438
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=95.66 E-value=0.064 Score=46.54 Aligned_cols=146 Identities=17% Similarity=0.177 Sum_probs=83.8
Q ss_pred eeeeCCccccceEEEEeCC-c-cEEEEecCCC-C-c---chHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEec
Q 022304 27 ICPVGGGCINLASRYGTDA-G-SFFVKTNRSI-G-P---SMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 99 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~~~-g-~~vlK~~~~~-~-~---~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~ 99 (299)
+..+|.|.+..||++...+ | -+.+|.+... . + ...-+|+..|+.|.... ...++..-.- ....++|+||
T Consensus 7 LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~N---LVnLiEVFrr-krklhLVFE~ 82 (396)
T KOG0593|consen 7 LGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHEN---LVNLIEVFRR-KRKLHLVFEY 82 (396)
T ss_pred hhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccch---HHHHHHHHHh-cceeEEEeee
Confidence 3478899999999998743 4 3455766532 1 1 22347888888886521 1222222211 5788999999
Q ss_pred ccCCCCCCcHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCCCCHHHHHHHhhhHHHHHHHHhhcCChHHHHHH
Q 022304 100 IEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRG 179 (299)
Q Consensus 100 l~G~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (299)
++-. .|..|...+. |.+ . ..+.. .+
T Consensus 83 ~dhT-----------vL~eLe~~p~-----G~~---------------~--------~~vk~----------------~l 107 (396)
T KOG0593|consen 83 CDHT-----------VLHELERYPN-----GVP---------------S--------ELVKK----------------YL 107 (396)
T ss_pred cchH-----------HHHHHHhccC-----CCC---------------H--------HHHHH----------------HH
Confidence 9764 2222222221 110 0 01111 11
Q ss_pred HHHHHHHhccccCCCCCcceeccCCCCCCeeecCCCCeEEEccc-c-c---cCCchhhhhhh
Q 022304 180 HRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA-C-Y---YGHNEAEFGMS 236 (299)
Q Consensus 180 ~~~~~~l~~~l~~~~~~~~liHgDl~~~Nvl~~~~~~~~iID~~-~-~---~g~~~~Dla~~ 236 (299)
-+++..+. +. ...-.||+|++|.|||++.++++-+.||. + . -|+...|...+
T Consensus 108 ~Q~l~ai~-~c----Hk~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pgd~YTDYVAT 164 (396)
T KOG0593|consen 108 YQLLKAIH-FC----HKNNCIHRDIKPENILITQNGVVKLCDFGFARTLSAPGDNYTDYVAT 164 (396)
T ss_pred HHHHHHhh-hh----hhcCeecccCChhheEEecCCcEEeccchhhHhhcCCcchhhhhhhh
Confidence 12222221 11 13459999999999999999988999963 3 2 46777777644
No 439
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=95.01 E-value=0.17 Score=48.45 Aligned_cols=133 Identities=17% Similarity=0.189 Sum_probs=79.3
Q ss_pred eeeeCCccccceEEEEeC--CccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEe
Q 022304 27 ICPVGGGCINLASRYGTD--AGSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 98 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~~--~g~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e 98 (299)
+.-+|-|....|+..+.. +.-|.+|.-.++ .-.....|.+++.....+ ++ .-.++..-.+ ....|+|||
T Consensus 373 l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~H-PF-L~~L~~~fQT-~~~l~fvme 449 (694)
T KOG0694|consen 373 LAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRH-PF-LVNLFSCFQT-KEHLFFVME 449 (694)
T ss_pred EEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccC-Ce-Eeeccccccc-CCeEEEEEE
Confidence 345677877888888763 336778876542 223456788888777654 21 2223333333 678999999
Q ss_pred cccCCCCCCcHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCCCCHHHHHHHhhhHHHHHHHHhhcCChHHHHH
Q 022304 99 FIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQR 178 (299)
Q Consensus 99 ~l~G~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (299)
|+.|++. +|-... ..|. ..-..||.+
T Consensus 450 y~~Ggdm-------------~~~~~~--~~F~-----------------e~rarfyaA---------------------- 475 (694)
T KOG0694|consen 450 YVAGGDL-------------MHHIHT--DVFS-----------------EPRARFYAA---------------------- 475 (694)
T ss_pred ecCCCcE-------------EEEEec--cccc-----------------HHHHHHHHH----------------------
Confidence 9999742 111111 0011 000112211
Q ss_pred HHHHHHHHhccccCCCCCcceeccCCCCCCeeecCCCCeEEEccc
Q 022304 179 GHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA 223 (299)
Q Consensus 179 ~~~~~~~l~~~l~~~~~~~~liHgDl~~~Nvl~~~~~~~~iID~~ 223 (299)
+++-.+. +|. ...+|++|++.+|||+|.+|...|.|+.
T Consensus 476 --ev~l~L~-fLH----~~~IIYRDlKLdNiLLD~eGh~kiADFG 513 (694)
T KOG0694|consen 476 --EVVLGLQ-FLH----ENGIIYRDLKLDNLLLDTEGHVKIADFG 513 (694)
T ss_pred --HHHHHHH-HHH----hcCceeeecchhheEEcccCcEEecccc
Confidence 1111122 332 4689999999999999999988999985
No 440
>KOG2269 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=95.00 E-value=0.057 Score=47.61 Aligned_cols=36 Identities=25% Similarity=0.339 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEecccCC
Q 022304 62 EGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFG 103 (299)
Q Consensus 62 ~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~ 103 (299)
++|..-|.....+ |+|||.|+... ...+||+||...
T Consensus 333 EkEmhNL~RMq~~-GlpcP~vV~lk-----khvLVMsFiGd~ 368 (531)
T KOG2269|consen 333 EKEMHNLSRMQKH-GLPCPQVVKLK-----KHVLVMSFIGDQ 368 (531)
T ss_pred HHHHHHHHHHHhc-CCCCCceeeee-----cceEEEEeecCC
Confidence 4566666666666 79999999886 559999999654
No 441
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=94.99 E-value=0.11 Score=48.71 Aligned_cols=69 Identities=12% Similarity=0.126 Sum_probs=45.6
Q ss_pred eeeCCccccceEEEEeCCc--cEEEEecCCCCcch-----HHHHHHHHHHHHhcCCCCCccceee-cccC-CCceEEEEe
Q 022304 28 CPVGGGCINLASRYGTDAG--SFFVKTNRSIGPSM-----FEGEALGLGAMYETRTIRAPRPFKV-GALP-TGGSYIIME 98 (299)
Q Consensus 28 ~~~~~G~~n~~y~v~~~~g--~~vlK~~~~~~~~~-----~~~E~~~l~~L~~~~~~~vP~~~~~-~~~~-~~~~~~v~e 98 (299)
+-+|.|....||+-+..+. -+.+|...+..+.. +++|.++++.|+. |.++.+ +... ....|+|.|
T Consensus 8 e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkH------pniv~m~esfEt~~~~~vVte 81 (808)
T KOG0597|consen 8 EMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKH------PNIVEMLESFETSAHLWVVTE 81 (808)
T ss_pred HHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCC------cchhhHHHhhcccceEEEEeh
Confidence 5678888889999876543 34456665433333 7889988887754 555533 2221 457899999
Q ss_pred cccC
Q 022304 99 FIEF 102 (299)
Q Consensus 99 ~l~G 102 (299)
|..|
T Consensus 82 ~a~g 85 (808)
T KOG0597|consen 82 YAVG 85 (808)
T ss_pred hhhh
Confidence 9887
No 442
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=94.95 E-value=0.015 Score=47.71 Aligned_cols=28 Identities=25% Similarity=0.327 Sum_probs=25.6
Q ss_pred CcceeccCCCCCCeeecCCCCeEEEccc
Q 022304 196 EPCLLHGDLWSGNISSDKNGEPVILDPA 223 (299)
Q Consensus 196 ~~~liHgDl~~~Nvl~~~~~~~~iID~~ 223 (299)
...+||+|++|+|||++.+|++.|.||.
T Consensus 167 kL~vIHRDvKPsNiLIn~~GqVKiCDFG 194 (282)
T KOG0984|consen 167 KLSVIHRDVKPSNILINYDGQVKICDFG 194 (282)
T ss_pred HhhhhhccCCcceEEEccCCcEEEcccc
Confidence 4689999999999999999999999985
No 443
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=94.95 E-value=0.047 Score=49.16 Aligned_cols=72 Identities=15% Similarity=0.157 Sum_probs=44.7
Q ss_pred eeeCCccccceEEEEe-CCc-cEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCccceeecc-cC-CCceEEEE
Q 022304 28 CPVGGGCINLASRYGT-DAG-SFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGA-LP-TGGSYIIM 97 (299)
Q Consensus 28 ~~~~~G~~n~~y~v~~-~~g-~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~-~~-~~~~~~v~ 97 (299)
+.+|.|.+..|-+.+- ..| .+.+|.-+.+ ....+++|++++..|.. |.++..-+ +. .+...++|
T Consensus 59 etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNH------PhII~IyEVFENkdKIvivM 132 (668)
T KOG0611|consen 59 ETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNH------PHIIQIYEVFENKDKIVIVM 132 (668)
T ss_pred HHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCC------CceeehhhhhcCCceEEEEE
Confidence 4567777666555543 234 4455654431 23457899999988864 55554322 11 46889999
Q ss_pred ecccCCCC
Q 022304 98 EFIEFGSS 105 (299)
Q Consensus 98 e~l~G~~~ 105 (299)
||..|+.+
T Consensus 133 EYaS~GeL 140 (668)
T KOG0611|consen 133 EYASGGEL 140 (668)
T ss_pred EecCCccH
Confidence 99998744
No 444
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=94.93 E-value=0.021 Score=50.36 Aligned_cols=48 Identities=8% Similarity=0.004 Sum_probs=33.2
Q ss_pred eeeeeeeCCccccceEEEEe--CCccEEEEecCCCCcchHHHHHHHHHHHH
Q 022304 24 ITKICPVGGGCINLASRYGT--DAGSFFVKTNRSIGPSMFEGEALGLGAMY 72 (299)
Q Consensus 24 ~~~~~~~~~G~~n~~y~v~~--~~g~~vlK~~~~~~~~~~~~E~~~l~~L~ 72 (299)
+....-+|.|..+.||+... +++.+.+|-.-++.+ .-.+|..+++.+.
T Consensus 26 ~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r-~knrEl~im~~l~ 75 (364)
T KOG0658|consen 26 YEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR-YKNRELQIMRKLD 75 (364)
T ss_pred EEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCC-cCcHHHHHHHhcC
Confidence 34566678898899999765 345888887655433 2357999998553
No 445
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=94.82 E-value=0.29 Score=43.18 Aligned_cols=52 Identities=12% Similarity=0.161 Sum_probs=38.4
Q ss_pred CccEEEEecCCC-CcchHHHHHHHHHHHHhcCCCCCccceeecccCCC-ceEEEEecc
Q 022304 45 AGSFFVKTNRSI-GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTG-GSYIIMEFI 100 (299)
Q Consensus 45 ~g~~vlK~~~~~-~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~-~~~~v~e~l 100 (299)
+..+.+|+.+.. ....+.-|++.++.|.. ..-+|.+|.++.. | ...+|++-+
T Consensus 53 ne~VAIKfEPrkS~APQLrdEYr~YKlL~g--~~GIP~vYYFGqe--G~~NiLVidLL 106 (449)
T KOG1165|consen 53 NEPVAIKFEPRKSEAPQLRDEYRTYKLLGG--TEGIPQVYYFGQE--GKYNILVIDLL 106 (449)
T ss_pred CceEEEEeccccCCcchHHHHHHHHHHHcC--CCCCCceeeeccc--cchhhhhhhhh
Confidence 347788988743 34678999999999985 3568999999873 4 456676654
No 446
>PHA02882 putative serine/threonine kinase; Provisional
Probab=94.78 E-value=0.032 Score=48.69 Aligned_cols=27 Identities=33% Similarity=0.416 Sum_probs=24.0
Q ss_pred cceeccCCCCCCeeecCCCCeEEEccc
Q 022304 197 PCLLHGDLWSGNISSDKNGEPVILDPA 223 (299)
Q Consensus 197 ~~liHgDl~~~Nvl~~~~~~~~iID~~ 223 (299)
..++|+|++|.|||+++++.+.|+||.
T Consensus 145 ~~iiHrDiKp~Nill~~~~~~~l~DFG 171 (294)
T PHA02882 145 HGISHGDIKPENIMVDGNNRGYIIDYG 171 (294)
T ss_pred CCeecCCCCHHHEEEcCCCcEEEEEcC
Confidence 479999999999999887778899985
No 447
>PF10009 DUF2252: Uncharacterized protein conserved in bacteria (DUF2252); InterPro: IPR018721 This domain has no known function.
Probab=94.66 E-value=0.037 Score=50.37 Aligned_cols=58 Identities=22% Similarity=0.287 Sum_probs=42.5
Q ss_pred CCCcceeccCCCCCCeeec--CCCCeEEEc---c-ccccCCchhhhhhh--hh------cCCC--------hhhHHHhhh
Q 022304 194 NVEPCLLHGDLWSGNISSD--KNGEPVILD---P-ACYYGHNEAEFGMS--WC------AGFG--------GSFYNSYFE 251 (299)
Q Consensus 194 ~~~~~liHgDl~~~Nvl~~--~~~~~~iID---~-~~~~g~~~~Dla~~--~~------~~~~--------~~f~~~Y~~ 251 (299)
..+.++|+||+|.+|+=.- +++ ..++| | +++.|+++||+-.+ ++ .+++ ..|+++|.+
T Consensus 40 ~~~~v~icGD~Hl~NFG~~~~~~~-~~vFdiNDFDEa~~gp~~wDl~Rla~Si~laa~~~gl~~~~~~~~~~~~~~~Y~~ 118 (385)
T PF10009_consen 40 SGPPVWICGDAHLENFGAFASPEG-RVVFDINDFDEALPGPFEWDLKRLATSIVLAARENGLSDKDARKAVRAFLEGYRE 118 (385)
T ss_pred CCCceEEeccchhhccCcccCCCC-CEEecCCCCCcCCcCChHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHH
Confidence 3688999999999998653 334 45666 6 48999999999865 11 2444 368888887
Q ss_pred h
Q 022304 252 V 252 (299)
Q Consensus 252 ~ 252 (299)
.
T Consensus 119 ~ 119 (385)
T PF10009_consen 119 A 119 (385)
T ss_pred H
Confidence 5
No 448
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=94.43 E-value=0.18 Score=47.70 Aligned_cols=43 Identities=33% Similarity=0.408 Sum_probs=29.7
Q ss_pred HHHHHHHHHHHhccccCCCCCcceeccCCCCCCeeecCC-CCeEEEc
Q 022304 176 YQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKN-GEPVILD 221 (299)
Q Consensus 176 ~~~~~~~~~~l~~~l~~~~~~~~liHgDl~~~Nvl~~~~-~~~~iID 221 (299)
..|..+++..|..+.. ..|.+||+|++++||+++++ |.+.|=|
T Consensus 146 k~W~RQILkGL~yLHs---~~PPIIHRDLKCDNIFinG~~G~VKIGD 189 (632)
T KOG0584|consen 146 KSWCRQILKGLVYLHS---QDPPIIHRDLKCDNIFVNGNLGEVKIGD 189 (632)
T ss_pred HHHHHHHHHHhhhhhc---CCCCccccccccceEEEcCCcCceeecc
Confidence 3455566666654433 46789999999999999765 4455655
No 449
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=94.37 E-value=0.047 Score=51.50 Aligned_cols=27 Identities=30% Similarity=0.308 Sum_probs=22.9
Q ss_pred cceeccCCCCCCeeec-CCCCeEEEccc
Q 022304 197 PCLLHGDLWSGNISSD-KNGEPVILDPA 223 (299)
Q Consensus 197 ~~liHgDl~~~Nvl~~-~~~~~~iID~~ 223 (299)
.+++|+||+|+|||++ ..+..-|+||.
T Consensus 434 ~gvvhRDLkp~NIL~~~~~g~lrltyFG 461 (612)
T KOG0603|consen 434 QGVVHRDLKPGNILLDGSAGHLRLTYFG 461 (612)
T ss_pred cCeeecCCChhheeecCCCCcEEEEEec
Confidence 6999999999999994 55667899963
No 450
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=94.10 E-value=0.25 Score=45.29 Aligned_cols=73 Identities=21% Similarity=0.132 Sum_probs=45.3
Q ss_pred eeeeCCccccceEEEEe--CCccEEEEecCC-----CCcchHHHHHHHHHHHHhcCCCCCccceeecccC--CCc-eEEE
Q 022304 27 ICPVGGGCINLASRYGT--DAGSFFVKTNRS-----IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALP--TGG-SYII 96 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~--~~g~~vlK~~~~-----~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~--~~~-~~~v 96 (299)
++.+|.|....++.+.. ++..||+|.-.- ..+.....|..++..+ .-|-++.+-+.- ++. -+++
T Consensus 9 ~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~------~hP~iv~y~ds~~~~~~~l~Iv 82 (426)
T KOG0589|consen 9 LRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKL------LHPNIVEYKDSFEEDGQLLCIV 82 (426)
T ss_pred hhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhc------cCCCeeeeccchhcCCceEEEE
Confidence 45677777666666654 333899986642 1223334566555443 347777664432 455 8999
Q ss_pred EecccCCCC
Q 022304 97 MEFIEFGSS 105 (299)
Q Consensus 97 ~e~l~G~~~ 105 (299)
|+|++|+++
T Consensus 83 m~Y~eGg~l 91 (426)
T KOG0589|consen 83 MEYCEGGDL 91 (426)
T ss_pred EeecCCCCH
Confidence 999999843
No 451
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=93.44 E-value=0.056 Score=46.25 Aligned_cols=28 Identities=25% Similarity=0.297 Sum_probs=24.2
Q ss_pred CCcceeccCCCCCCeeecCCCCeEEEcc
Q 022304 195 VEPCLLHGDLWSGNISSDKNGEPVILDP 222 (299)
Q Consensus 195 ~~~~liHgDl~~~Nvl~~~~~~~~iID~ 222 (299)
...++||+|++|.|||+|..|++.+.||
T Consensus 209 eKH~viHRDvKPSNILlDe~GniKlCDF 236 (391)
T KOG0983|consen 209 EKHGVIHRDVKPSNILLDERGNIKLCDF 236 (391)
T ss_pred HhcceeecccCccceEEccCCCEEeecc
Confidence 4679999999999999998887777775
No 452
>cd05124 AFK Actin-Fragmin Kinase (AFK); catalytic domain. The AFK catalytic domain is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). AFK is found in slime molds, ciliates, and flowering plants. It catalyzes the transfer of the gamma-phosphoryl group from ATP specifically to threonine residues in the actin-fragmin complex. The phosphorylation sites are located at a minor contact site for DNase I and at an actin-actin contact site. Fragmin is an actin-binding protein that functions as a regulator of the microfilament system. It interferes with the growth of F-actin by severing actin filaments and capping their ends. The phosphorylation of the actin-fragmin complex inhibits its nucleation activity and results in calcium-dependent capping activity. Thus, AFK plays a role in regulating ac
Probab=93.27 E-value=0.34 Score=40.52 Aligned_cols=73 Identities=12% Similarity=0.079 Sum_probs=47.4
Q ss_pred eeeeCCccccceEEEEeCCccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCCccceeecc---c---------------
Q 022304 27 ICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGA---L--------------- 88 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~~~g~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~---~--------------- 88 (299)
+...++|..-.+..+.+++|.+|+|..+. +..|.-. ..|+...++|+|+.--... .
T Consensus 4 ~i~~s~s~~~~~~F~~s~~~a~ViK~s~t-----i~~E~~~-~~La~~LgVpiPq~rvi~~~~~E~~e~~~~L~~a~~~~ 77 (238)
T cd05124 4 AIDLSDSGVFGALFVESESGAIVVKSSPN-----IASEYFL-SKLAKILGLPIPQMRVLEWNSSEFTEMSENLLKASSED 77 (238)
T ss_pred EEEecCCceEEEEEEcCCCcEEEEEcCcc-----HHHHHHH-HHHHHHhCCCCCceeeeecCCHHHHHHHHHHHHHHhcc
Confidence 34456665556677777788999999854 2444433 3556666888887553221 1
Q ss_pred C----------CCceEEEEecccCCCC
Q 022304 89 P----------TGGSYIIMEFIEFGSS 105 (299)
Q Consensus 89 ~----------~~~~~~v~e~l~G~~~ 105 (299)
. .-..+++|||++|.++
T Consensus 78 ~~~~~~i~~el~~~~flimeYv~G~~l 104 (238)
T cd05124 78 ECLERRITLELEKAYLLIMEYVPGITL 104 (238)
T ss_pred hhHHHHHHHHHhhhheeeeeecCCccc
Confidence 0 1237899999999876
No 453
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=93.05 E-value=0.2 Score=47.22 Aligned_cols=71 Identities=20% Similarity=0.218 Sum_probs=46.7
Q ss_pred ceeeeeeeCCccccceEEEEeCCccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCCccceeec-c-cCCCceEEEEecc
Q 022304 23 HITKICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVG-A-LPTGGSYIIMEFI 100 (299)
Q Consensus 23 ~~~~~~~~~~G~~n~~y~v~~~~g~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~-~-~~~~~~~~v~e~l 100 (299)
+|..++=+|.|....||+=+..+..+.||-.+. +-+.++ ++|+. +.-|.++.+. . +...-.+++|||+
T Consensus 125 ~IsELeWlGSGaQGAVF~Grl~netVAVKKV~e----lkETdI---KHLRk---LkH~NII~FkGVCtqsPcyCIiMEfC 194 (904)
T KOG4721|consen 125 EISELEWLGSGAQGAVFLGRLHNETVAVKKVRE----LKETDI---KHLRK---LKHPNIITFKGVCTQSPCYCIIMEFC 194 (904)
T ss_pred HhhhhhhhccCcccceeeeeccCceehhHHHhh----hhhhhH---HHHHh---ccCcceeeEeeeecCCceeEEeeecc
Confidence 566677788888888999888877887876532 223444 45543 3447777652 1 1134568999999
Q ss_pred cCC
Q 022304 101 EFG 103 (299)
Q Consensus 101 ~G~ 103 (299)
.-+
T Consensus 195 a~G 197 (904)
T KOG4721|consen 195 AQG 197 (904)
T ss_pred ccc
Confidence 765
No 454
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=92.80 E-value=0.15 Score=42.71 Aligned_cols=72 Identities=17% Similarity=0.106 Sum_probs=43.4
Q ss_pred eeeCCccccceEEEEeCCccEEE--EecCCC------CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEec
Q 022304 28 CPVGGGCINLASRYGTDAGSFFV--KTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 99 (299)
Q Consensus 28 ~~~~~G~~n~~y~v~~~~g~~vl--K~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~ 99 (299)
.++|.|-...||........|++ |+.... ....+++|.++-.+|..- .+-+.|..--+ +...|+++||
T Consensus 28 r~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hp---nilrlY~~fhd-~~riyLilEy 103 (281)
T KOG0580|consen 28 RPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHP---NILRLYGYFHD-SKRIYLILEY 103 (281)
T ss_pred ccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCc---cHHhhhhheec-cceeEEEEEe
Confidence 46777877899998877665554 654321 234556666666666431 12233322111 4688999999
Q ss_pred ccCC
Q 022304 100 IEFG 103 (299)
Q Consensus 100 l~G~ 103 (299)
..+.
T Consensus 104 a~~g 107 (281)
T KOG0580|consen 104 APRG 107 (281)
T ss_pred cCCc
Confidence 8775
No 455
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=92.00 E-value=0.15 Score=51.82 Aligned_cols=50 Identities=14% Similarity=0.110 Sum_probs=34.2
Q ss_pred eeeeeeeCCccccceEEEEeC-Cc-cEEEEecC-CC---CcchHHHHHHHHHHHHh
Q 022304 24 ITKICPVGGGCINLASRYGTD-AG-SFFVKTNR-SI---GPSMFEGEALGLGAMYE 73 (299)
Q Consensus 24 ~~~~~~~~~G~~n~~y~v~~~-~g-~~vlK~~~-~~---~~~~~~~E~~~l~~L~~ 73 (299)
...++.+|.|....||+|+.. || .|.+|.-+ .. ....+.+|+.++..|..
T Consensus 481 FEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnH 536 (1351)
T KOG1035|consen 481 FEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNH 536 (1351)
T ss_pred hHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCC
Confidence 335667888888999999974 45 77776443 31 12446789988877753
No 456
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=91.98 E-value=0.15 Score=43.75 Aligned_cols=53 Identities=26% Similarity=0.240 Sum_probs=37.5
Q ss_pred HHHHHHHHHhccccCCCCCcceeccCCCCCCeeecCCCCeEEEccc--cc--cCCchhhhhh
Q 022304 178 RGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA--CY--YGHNEAEFGM 235 (299)
Q Consensus 178 ~~~~~~~~l~~~l~~~~~~~~liHgDl~~~Nvl~~~~~~~~iID~~--~~--~g~~~~Dla~ 235 (299)
.+.++++.+..+. ...++|.|++|.|||++++-...|-||. |. -|....|+.-
T Consensus 128 iMrqlfegVeylH-----a~~IVHRDLKpENILlddn~~i~isDFGFa~~l~~GekLrelCG 184 (411)
T KOG0599|consen 128 IMRQLFEGVEYLH-----ARNIVHRDLKPENILLDDNMNIKISDFGFACQLEPGEKLRELCG 184 (411)
T ss_pred HHHHHHHHHHHHH-----HhhhhhcccChhheeeccccceEEeccceeeccCCchhHHHhcC
Confidence 3444555544332 2579999999999999988778899963 32 5777777764
No 457
>PHA00451 protein kinase
Probab=91.92 E-value=0.12 Score=43.77 Aligned_cols=37 Identities=38% Similarity=0.541 Sum_probs=28.2
Q ss_pred ceeccCCCCCCeeecCCCCeEEEccccccCCchhhhh
Q 022304 198 CLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFG 234 (299)
Q Consensus 198 ~liHgDl~~~Nvl~~~~~~~~iID~~~~~g~~~~Dla 234 (299)
++--=|.|+||||+++++.++|-|+-++..|...+=+
T Consensus 189 GIASFDmHSGNiMf~~~g~p~ITDPVSFS~dr~re~G 225 (362)
T PHA00451 189 GIASFDMHSGNIMFDQDGVPYITDPVSFSHDREREPG 225 (362)
T ss_pred hhhcccccCCceeeCCCCCeEecCCccccCccccCCC
Confidence 3445599999999999999999998666655555443
No 458
>PF07387 Seadorna_VP7: Seadornavirus VP7; InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length. The function of this family is unknown.
Probab=91.59 E-value=0.12 Score=43.12 Aligned_cols=30 Identities=40% Similarity=0.583 Sum_probs=26.5
Q ss_pred CCcceeccCCCCCCeeecCCCCeEEEcccc
Q 022304 195 VEPCLLHGDLWSGNISSDKNGEPVILDPAC 224 (299)
Q Consensus 195 ~~~~liHgDl~~~Nvl~~~~~~~~iID~~~ 224 (299)
.....+|||..|+|||.|+.|-..++|+.+
T Consensus 160 ~~~~~lHGD~np~NiM~D~~G~lKlVDP~~ 189 (308)
T PF07387_consen 160 ENQHCLHGDCNPDNIMCDKFGYLKLVDPVC 189 (308)
T ss_pred cCCCeecCCCChhheeecCCCCEEecChhh
Confidence 467899999999999999999889999754
No 459
>PF09192 Act-Frag_cataly: Actin-fragmin kinase, catalytic; InterPro: IPR015275 This domain assumes a secondary structure consisting of eight beta strands and 11 alpha-helices, organised in two lobes. It is predominantly found in actin-fragmin kinase, it is the catalytic domain that mediates the phosphorylation of actin []. ; PDB: 1CJA_A.
Probab=91.44 E-value=1 Score=38.81 Aligned_cols=77 Identities=12% Similarity=0.138 Sum_probs=39.1
Q ss_pred ceeeeeeeCCc-cccceEEEEeCCc----cEEEEecCCCCcchHHHHHHHHHHHHhcCCCCCccce--eeccc-------
Q 022304 23 HITKICPVGGG-CINLASRYGTDAG----SFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPF--KVGAL------- 88 (299)
Q Consensus 23 ~~~~~~~~~~G-~~n~~y~v~~~~g----~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~~~vP~~~--~~~~~------- 88 (299)
.+.++.....| .++.||.|.+.++ .+|+|..+. ++.|.-. ..|+...++|+|+.- .....
T Consensus 26 ~l~sv~~s~~g~ns~gv~fv~~f~~~~~~avViK~s~t-----~~~E~~~-s~La~~Lgv~~P~~Rii~~~~~E~~e~~~ 99 (275)
T PF09192_consen 26 SLSSVHHSEHGVNSGGVFFVATFSGSKEEAVVIKFSST-----IQQEVFA-SELARWLGVPTPQMRIIESSSSEFQEMSE 99 (275)
T ss_dssp -CCCEEEEEE-STTS-EEEEEETTE----EEEEE--TT-----HHHHHHH-HHHHHHCT-----EEEEESSSHHHHHHHH
T ss_pred HhhhHHhhccccCCCCEEEEEEcCCCceEEEEEecCCc-----hHHHHHH-HHHHHHhCCCCCceeeeecCCHHHHHHHH
Confidence 45567776666 2456777777666 789999854 5555543 356666788888754 32221
Q ss_pred ---------C----------CCceEEEEecccCCCC
Q 022304 89 ---------P----------TGGSYIIMEFIEFGSS 105 (299)
Q Consensus 89 ---------~----------~~~~~~v~e~l~G~~~ 105 (299)
+ ....+++|||++|.++
T Consensus 100 ~l~~a~~~~~~l~~~i~~el~~a~~liMeyv~G~~L 135 (275)
T PF09192_consen 100 ALLFATSNDDELGDFICSELDKAFFLIMEYVPGKPL 135 (275)
T ss_dssp HHH----HH-SSS-HHHHHCT-SEEEEEE---EEES
T ss_pred HHHhhcccchHHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence 0 2345889999999876
No 460
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=91.36 E-value=0.12 Score=44.14 Aligned_cols=28 Identities=29% Similarity=0.401 Sum_probs=24.2
Q ss_pred CcceeccCCCCCCeeecCCCCeEEEccc
Q 022304 196 EPCLLHGDLWSGNISSDKNGEPVILDPA 223 (299)
Q Consensus 196 ~~~liHgDl~~~Nvl~~~~~~~~iID~~ 223 (299)
..-+||+|++|.|||++..|.+.+.||.
T Consensus 186 ~lkiIHRDvKPSNILldr~G~vKLCDFG 213 (361)
T KOG1006|consen 186 ELKIIHRDVKPSNILLDRHGDVKLCDFG 213 (361)
T ss_pred HhhhhhccCChhheEEecCCCEeeeccc
Confidence 4568999999999999988878888875
No 461
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=91.05 E-value=1.2 Score=42.72 Aligned_cols=149 Identities=19% Similarity=0.150 Sum_probs=85.6
Q ss_pred ceeeeeeeCCccccceEEEEeCCc--cEEEEecCCCC--cchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEe
Q 022304 23 HITKICPVGGGCINLASRYGTDAG--SFFVKTNRSIG--PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 98 (299)
Q Consensus 23 ~~~~~~~~~~G~~n~~y~v~~~~g--~~vlK~~~~~~--~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e 98 (299)
+|+=--++|||++..||.=.-..- .+.||.-..++ -..+-+|+++++.+.. -...+++..+.. +.-.|++.|
T Consensus 268 dItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtMeveEFLkEAAvMKeikH---pNLVqLLGVCT~-EpPFYIiTE 343 (1157)
T KOG4278|consen 268 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH---PNLVQLLGVCTH-EPPFYIITE 343 (1157)
T ss_pred heeeeeccCCCcccceeeeeeeccceeeehhhhhhcchhHHHHHHHHHHHHhhcC---ccHHHHhhhhcc-CCCeEEEEe
Confidence 344446789999999998544322 44555544432 2456788998888864 123455666543 567789999
Q ss_pred cccCCCCCCcHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCCCCHHHHHHHhhhHHHHHHHHhhcCChHHHHH
Q 022304 99 FIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQR 178 (299)
Q Consensus 99 ~l~G~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (299)
|..-+ .|-+.|++-.+...+ ...-.++.
T Consensus 344 fM~yG-------NLLdYLRecnr~ev~-----------------------avvLlyMA---------------------- 371 (1157)
T KOG4278|consen 344 FMCYG-------NLLDYLRECNRSEVP-----------------------AVVLLYMA---------------------- 371 (1157)
T ss_pred cccCc-------cHHHHHHHhchhhcc-----------------------hhHHHHHH----------------------
Confidence 98765 334455443222210 00001111
Q ss_pred HHHHHHHHhccccCCCCCcceeccCCCCCCeeecCCCCeEEEccc---cccCCchhhh
Q 022304 179 GHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA---CYYGHNEAEF 233 (299)
Q Consensus 179 ~~~~~~~l~~~l~~~~~~~~liHgDl~~~Nvl~~~~~~~~iID~~---~~~g~~~~Dl 233 (299)
.++... .++|+ ..-+||+||-..|+|+.++..+.|-||. .+-||-..--
T Consensus 372 -tQIsSa-MeYLE----kknFIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDTYTAH 423 (1157)
T KOG4278|consen 372 -TQISSA-MEYLE----KKNFIHRDLAARNCLVGENHIVKVADFGLSRLMTGDTYTAH 423 (1157)
T ss_pred -HHHHHH-HHHHH----HhhhhhhhhhhhhccccccceEEeeccchhhhhcCCceecc
Confidence 111111 12332 3578999999999999888767788874 2456654433
No 462
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=90.26 E-value=0.34 Score=41.33 Aligned_cols=27 Identities=22% Similarity=0.211 Sum_probs=23.3
Q ss_pred cceeccCCCCCCeeecCCCCeEEEccc
Q 022304 197 PCLLHGDLWSGNISSDKNGEPVILDPA 223 (299)
Q Consensus 197 ~~liHgDl~~~Nvl~~~~~~~~iID~~ 223 (299)
..++|+|++|.||++++++...++|+.
T Consensus 132 ~~i~H~dikp~nili~~~~~~kl~dfg 158 (273)
T cd05074 132 KNFIHRDLAARNCMLNENMTVCVADFG 158 (273)
T ss_pred CCEeecccchhhEEEcCCCCEEECccc
Confidence 469999999999999877777888964
No 463
>PLN00181 protein SPA1-RELATED; Provisional
Probab=90.25 E-value=0.38 Score=48.34 Aligned_cols=26 Identities=0% Similarity=0.021 Sum_probs=21.9
Q ss_pred cceeccCCCCCCeeecCCCCeEEEcc
Q 022304 197 PCLLHGDLWSGNISSDKNGEPVILDP 222 (299)
Q Consensus 197 ~~liHgDl~~~Nvl~~~~~~~~iID~ 222 (299)
..++|+|++|.|||+++.+...++|+
T Consensus 99 ~gIvHrDlKP~NiLl~~~~~~k~~d~ 124 (793)
T PLN00181 99 QGIVVHNVRPSCFVMSSFNHVSFIES 124 (793)
T ss_pred CCeeeccCCchhEEEcccCcEEEeec
Confidence 57999999999999987666677775
No 464
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=90.03 E-value=0.42 Score=44.65 Aligned_cols=33 Identities=18% Similarity=0.180 Sum_probs=25.4
Q ss_pred CcceeccCCCCCCeeecCCCC-eEEEccc-cc-cCC
Q 022304 196 EPCLLHGDLWSGNISSDKNGE-PVILDPA-CY-YGH 228 (299)
Q Consensus 196 ~~~liHgDl~~~Nvl~~~~~~-~~iID~~-~~-~g~ 228 (299)
.+.++|+|++|+|||+..+.. .-|+||. ++ .+.
T Consensus 554 ~c~vlHaDIKPDNiLVNE~k~iLKLCDfGSA~~~~e 589 (752)
T KOG0670|consen 554 KCGVLHADIKPDNILVNESKNILKLCDFGSASFASE 589 (752)
T ss_pred hcCeeecccCccceEeccCcceeeeccCcccccccc
Confidence 578999999999999976553 4689985 43 444
No 465
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=89.38 E-value=0.36 Score=43.63 Aligned_cols=35 Identities=31% Similarity=0.458 Sum_probs=25.8
Q ss_pred CcceeccCCCCCCeee--cCCCCe--EEEccccccCCch
Q 022304 196 EPCLLHGDLWSGNISS--DKNGEP--VILDPACYYGHNE 230 (299)
Q Consensus 196 ~~~liHgDl~~~Nvl~--~~~~~~--~iID~~~~~g~~~ 230 (299)
..++-|.|++++|||+ |+|+.+ .|-||.||..|-.
T Consensus 359 ~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~ 397 (598)
T KOG4158|consen 359 KHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDN 397 (598)
T ss_pred HccchhhcccccceEEEecCCCCcEEEEcccceeeeccc
Confidence 4689999999999997 455544 4667877665543
No 466
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=89.16 E-value=0.45 Score=40.81 Aligned_cols=28 Identities=29% Similarity=0.311 Sum_probs=24.2
Q ss_pred CcceeccCCCCCCeeecCCCCeEEEccc
Q 022304 196 EPCLLHGDLWSGNISSDKNGEPVILDPA 223 (299)
Q Consensus 196 ~~~liHgDl~~~Nvl~~~~~~~~iID~~ 223 (299)
...++|+|++|||+|+..|-...|.||.
T Consensus 174 sA~ILHRDIKPGNLLVNSNCvLKICDFG 201 (449)
T KOG0664|consen 174 TANILHRDIKPGNLLVNSNCILKICDFG 201 (449)
T ss_pred hcchhhccCCCccEEeccCceEEecccc
Confidence 4689999999999999877667899985
No 467
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=88.72 E-value=0.32 Score=42.52 Aligned_cols=28 Identities=29% Similarity=0.343 Sum_probs=23.8
Q ss_pred CcceeccCCCCCCeeecCCCCeEEEccc
Q 022304 196 EPCLLHGDLWSGNISSDKNGEPVILDPA 223 (299)
Q Consensus 196 ~~~liHgDl~~~Nvl~~~~~~~~iID~~ 223 (299)
..+++|+||+|.|+++..+...-|.|+.
T Consensus 136 s~~IihRdLkPsnivv~~~~~lKi~dfg 163 (369)
T KOG0665|consen 136 SAGIIHRDLKPSNIVVNSDCTLKILDFG 163 (369)
T ss_pred hcceeecccCcccceecchhheeeccch
Confidence 4689999999999999766667788874
No 468
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=88.45 E-value=0.5 Score=41.82 Aligned_cols=32 Identities=22% Similarity=0.246 Sum_probs=26.7
Q ss_pred CcceeccCCCCCCeeecCCCCeEEEccc-cccC
Q 022304 196 EPCLLHGDLWSGNISSDKNGEPVILDPA-CYYG 227 (299)
Q Consensus 196 ~~~liHgDl~~~Nvl~~~~~~~~iID~~-~~~g 227 (299)
...++|+|++|+|++++.+-...|.||. +...
T Consensus 143 SAnViHRDLKPsNll~n~~c~lKI~DFGLAR~~ 175 (359)
T KOG0660|consen 143 SANVIHRDLKPSNLLLNADCDLKICDFGLARYL 175 (359)
T ss_pred cccccccccchhheeeccCCCEEeccccceeec
Confidence 4689999999999999888778999985 5443
No 469
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=88.03 E-value=0.3 Score=42.52 Aligned_cols=36 Identities=25% Similarity=0.279 Sum_probs=24.0
Q ss_pred CcceeccCCCCCCeeecCCCCeEEEcccc--ccCCchh
Q 022304 196 EPCLLHGDLWSGNISSDKNGEPVILDPAC--YYGHNEA 231 (299)
Q Consensus 196 ~~~liHgDl~~~Nvl~~~~~~~~iID~~~--~~g~~~~ 231 (299)
..+++|||+.+.|++++++|...+=|+.. ..|....
T Consensus 163 ~~GlVHgdi~~~nfll~~~G~v~Lg~F~~~~r~g~~~~ 200 (288)
T PF14531_consen 163 SYGLVHGDIKPENFLLDQDGGVFLGDFSSLVRAGTRYR 200 (288)
T ss_dssp HTTEEEST-SGGGEEE-TTS-EEE--GGGEEETTEEEE
T ss_pred hcceEecccceeeEEEcCCCCEEEcChHHHeecCceee
Confidence 36899999999999999999777878753 2555544
No 470
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=87.91 E-value=5.1 Score=37.52 Aligned_cols=138 Identities=20% Similarity=0.186 Sum_probs=82.3
Q ss_pred eeeCCccccceEEEEe--CCc----cEEEEecCC-C--C---cchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEE
Q 022304 28 CPVGGGCINLASRYGT--DAG----SFFVKTNRS-I--G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI 95 (299)
Q Consensus 28 ~~~~~G~~n~~y~v~~--~~g----~~vlK~~~~-~--~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~ 95 (299)
..+|.|....||+-+. .++ .+.+|.... . . ...+-.|+++++.|.. ..|-+.|..... ....++
T Consensus 163 kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H---~NVVr~yGVa~~-~~Pl~i 238 (474)
T KOG0194|consen 163 KKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNH---PNVVRFYGVAVL-EEPLML 238 (474)
T ss_pred ceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCC---CCEEEEEEEEcC-CCccEE
Confidence 6789999888888544 322 245565543 1 1 2345679999988753 356667765433 456789
Q ss_pred EEecccCCCCCCcHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCCCCHHHHHHHhhhHHHHHHHHhhcCChHH
Q 022304 96 IMEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTI 175 (299)
Q Consensus 96 v~e~l~G~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (299)
+||.+.|+. |-..|.+-...- ... .++..
T Consensus 239 vmEl~~gGs-------L~~~L~k~~~~v-------------------------~~~-----ek~~~-------------- 267 (474)
T KOG0194|consen 239 VMELCNGGS-------LDDYLKKNKKSL-------------------------PTL-----EKLRF-------------- 267 (474)
T ss_pred EEEecCCCc-------HHHHHHhCCCCC-------------------------CHH-----HHHHH--------------
Confidence 999999983 334444422100 000 11111
Q ss_pred HHHHHHHHHHHhccccCCCCCcceeccCCCCCCeeecCCCCeEEEccc-cccCC
Q 022304 176 YQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA-CYYGH 228 (299)
Q Consensus 176 ~~~~~~~~~~l~~~l~~~~~~~~liHgDl~~~Nvl~~~~~~~~iID~~-~~~g~ 228 (299)
.-.+...+.. +. ...+||+|+-..|+|++.++.+-|=||. +..|+
T Consensus 268 ---~~~AA~Gl~Y-Lh----~k~~IHRDIAARNcL~~~~~~vKISDFGLs~~~~ 313 (474)
T KOG0194|consen 268 ---CYDAARGLEY-LH----SKNCIHRDIAARNCLYSKKGVVKISDFGLSRAGS 313 (474)
T ss_pred ---HHHHHhHHHH-HH----HCCCcchhHhHHHheecCCCeEEeCccccccCCc
Confidence 1112222332 22 3589999999999999987766888875 45665
No 471
>COG4320 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=87.63 E-value=1.3 Score=38.72 Aligned_cols=61 Identities=18% Similarity=0.131 Sum_probs=42.0
Q ss_pred CCCcceeccCCCCCCeee--cCCCCe--EEEcc-ccccCCchhhhhhhh--h------cCCC--------hhhHHHhhhh
Q 022304 194 NVEPCLLHGDLWSGNISS--DKNGEP--VILDP-ACYYGHNEAEFGMSW--C------AGFG--------GSFYNSYFEV 252 (299)
Q Consensus 194 ~~~~~liHgDl~~~Nvl~--~~~~~~--~iID~-~~~~g~~~~Dla~~~--~------~~~~--------~~f~~~Y~~~ 252 (299)
+.|.+|+-||+|.+|.=- +.+|.+ -|=|| ++..|++.+|+..+. + .+.+ +.|+.+|...
T Consensus 55 ~~p~tw~cGD~HLgN~ga~~~~~G~V~f~i~DFDe~~~g~~~~DlvRl~~Sl~~a~Rs~~L~d~d~~~~~~~~v~~Y~~A 134 (410)
T COG4320 55 KTPFTWLCGDAHLGNFGAARNSKGNVVFKIADFDEGHLGQYIWDLVRLAVSLVLAGRSNGLNDADIEKAIKIMVQAYKMA 134 (410)
T ss_pred CCCceEEecccccccchhhccCCCceEEEecccchhhccchHHHHHHHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHh
Confidence 368899999999999853 223433 35567 478999999999752 1 2232 3689999655
Q ss_pred CC
Q 022304 253 MP 254 (299)
Q Consensus 253 ~~ 254 (299)
.+
T Consensus 135 a~ 136 (410)
T COG4320 135 AF 136 (410)
T ss_pred hc
Confidence 44
No 472
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=87.32 E-value=0.85 Score=39.76 Aligned_cols=75 Identities=17% Similarity=0.031 Sum_probs=41.2
Q ss_pred eeeeeeCCccccceEEEEeC--CccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCCccceee-cccCCCc--eEEEEec
Q 022304 25 TKICPVGGGCINLASRYGTD--AGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKV-GALPTGG--SYIIMEF 99 (299)
Q Consensus 25 ~~~~~~~~G~~n~~y~v~~~--~g~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~-~~~~~~~--~~~v~e~ 99 (299)
++.+-+|-|-...|-.+... +.+|.||+-....+ .++|++. .|+... .-.+..++.. ..+-.+. -.+|||.
T Consensus 65 is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds~K--ARrEVeL-Hw~~s~-h~~iV~IidVyeNs~~~rkcLLiVmE~ 140 (400)
T KOG0604|consen 65 ISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDSPK--ARREVEL-HWMASG-HPHIVSIIDVYENSYQGRKCLLIVMEC 140 (400)
T ss_pred ehhhhhccccCCceEEEEeccchhhhHHHHHhcCHH--HHhHhhh-hhhhcC-CCceEEeehhhhhhccCceeeEeeeec
Confidence 34577787876666665542 34888888765333 4567763 355432 1122333321 1111343 4578999
Q ss_pred ccCC
Q 022304 100 IEFG 103 (299)
Q Consensus 100 l~G~ 103 (299)
++|+
T Consensus 141 meGG 144 (400)
T KOG0604|consen 141 MEGG 144 (400)
T ss_pred ccch
Confidence 9995
No 473
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=86.31 E-value=0.79 Score=44.50 Aligned_cols=138 Identities=21% Similarity=0.184 Sum_probs=79.0
Q ss_pred ceeeeeeeCCccccceEEEEe--CCc---cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCccceeecccCCCce
Q 022304 23 HITKICPVGGGCINLASRYGT--DAG---SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGS 93 (299)
Q Consensus 23 ~~~~~~~~~~G~~n~~y~v~~--~~g---~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~ 93 (299)
.|.-.+.+|.|....|+|-+- .+| .+.||+-+.+. ...+.+|+..+-.|... -+-++|....+ -..
T Consensus 111 ~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~---hliRLyGvVl~--qp~ 185 (1039)
T KOG0199|consen 111 QIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHP---HLIRLYGVVLD--QPA 185 (1039)
T ss_pred HHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCc---ceeEEeeeecc--chh
Confidence 444567888888888888654 334 57889887542 34567888877666431 23344443211 112
Q ss_pred EEEEecccCCCCCCcHHHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCCCCCCCHHHHHHHhhhHHHHHHHHhhcCCh
Q 022304 94 YIIMEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDS 173 (299)
Q Consensus 94 ~~v~e~l~G~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (299)
-||+| ...+|..|.+||+.... .| +. ..+.
T Consensus 186 mMV~E----------LaplGSLldrLrka~~~--~l------------------------lv-----~~Lc--------- 215 (1039)
T KOG0199|consen 186 MMVFE----------LAPLGSLLDRLRKAKKA--IL------------------------LV-----SRLC--------- 215 (1039)
T ss_pred hHHhh----------hcccchHHHHHhhcccc--ce------------------------eH-----HHHH---------
Confidence 23333 33568889999994421 01 00 0011
Q ss_pred HHHHHHHHHHHHHhccccCCCCCcceeccCCCCCCeeecCCCCeEEEccc
Q 022304 174 TIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA 223 (299)
Q Consensus 174 ~~~~~~~~~~~~l~~~l~~~~~~~~liHgDl~~~Nvl~~~~~~~~iID~~ 223 (299)
....++...+ .+|+ -..+||+|+-..|+|+...+.+.|.||.
T Consensus 216 ---dya~QiA~aM-~YLe----skrlvHRDLAARNlllasprtVKI~DFG 257 (1039)
T KOG0199|consen 216 ---DYAMQIAKAM-QYLE----SKRLVHRDLAARNLLLASPRTVKICDFG 257 (1039)
T ss_pred ---HHHHHHHHHH-HHHh----hhhhhhhhhhhhhheecccceeeeeccc
Confidence 1111222221 2333 3689999999999999765667899975
No 474
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=84.53 E-value=7.6 Score=36.27 Aligned_cols=48 Identities=15% Similarity=-0.027 Sum_probs=32.8
Q ss_pred eeeeCCccccceEEEEeCCc-cE-EEEecCCC--CcchHHHHHHHHHHHHhc
Q 022304 27 ICPVGGGCINLASRYGTDAG-SF-FVKTNRSI--GPSMFEGEALGLGAMYET 74 (299)
Q Consensus 27 ~~~~~~G~~n~~y~v~~~~g-~~-vlK~~~~~--~~~~~~~E~~~l~~L~~~ 74 (299)
+.++|=|..++||......+ +| .+|+..+. .....-.|+.+|+.++..
T Consensus 83 ~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqhYtEaAlDEIklL~~v~~~ 134 (590)
T KOG1290|consen 83 QRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQHYTEAALDEIKLLQQVREG 134 (590)
T ss_pred EEeccccccceeEEEeeccCCeEEEEEEEehhhHHHHHHHHHHHHHHHHHhc
Confidence 56788788899999876544 44 45887652 122234688889888864
No 475
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=84.51 E-value=3.4 Score=40.71 Aligned_cols=78 Identities=17% Similarity=0.104 Sum_probs=53.5
Q ss_pred ceeeeeeeCCccccceEEEEeCCc-------cEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCCccceeecccCCC
Q 022304 23 HITKICPVGGGCINLASRYGTDAG-------SFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTG 91 (299)
Q Consensus 23 ~~~~~~~~~~G~~n~~y~v~~~~g-------~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~ 91 (299)
.+.-++.+|.|....||.-+..+. -+.||.-... .+..+++|++.+..|.. --|.+++..+.. +.
T Consensus 487 ~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H---~nIVrLlGVC~~-~~ 562 (774)
T KOG1026|consen 487 DIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQH---PNIVRLLGVCRE-GD 562 (774)
T ss_pred heeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccC---CCeEEEEEEEcc-CC
Confidence 455567888898888888776422 2445654432 34668999999888864 346777777653 45
Q ss_pred ceEEEEecccCCC
Q 022304 92 GSYIIMEFIEFGS 104 (299)
Q Consensus 92 ~~~~v~e~l~G~~ 104 (299)
-.+||+||.+-++
T Consensus 563 P~~MvFEYm~~GD 575 (774)
T KOG1026|consen 563 PLCMVFEYMDHGD 575 (774)
T ss_pred eeEEEEEeccccc
Confidence 6799999997653
No 476
>PF07805 HipA_N: HipA-like N-terminal domain; InterPro: IPR012894 The members of this entry contain a region that is found towards the N terminus of the HipA protein expressed by various bacterial species (for example P23874 from SWISSPROT). This protein is known to be involved in high-frequency persistence to the lethal effects of inhibition of either DNA or peptidoglycan synthesis []. When expressed alone, it is toxic to bacterial cells [], but it is usually tightly associated with HipB [], and the HipA-HipB complex may be involved in autoregulation of the hip operon. The hip proteins may be involved in cell division control and may interact with cell division genes or their products []. ; PDB: 2WIU_C 3HZI_A 3DNT_B 3FBR_A 3DNU_A 3DNV_A.
Probab=84.47 E-value=5 Score=27.52 Aligned_cols=52 Identities=17% Similarity=0.162 Sum_probs=30.6
Q ss_pred cEEEEecCCC-CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEeccc
Q 022304 47 SFFVKTNRSI-GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE 101 (299)
Q Consensus 47 ~~vlK~~~~~-~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~ 101 (299)
++|+|..... .......|+..++..+. .|++||..-.... .+..+++.++.+
T Consensus 28 ~~IvK~~~~~~~~~~~~nE~~~~~lA~~-~Gi~v~~~~l~~~--~~~~~l~v~RFD 80 (81)
T PF07805_consen 28 THIVKFPSSRDDPDLVENEYACMRLARA-AGIPVPETRLIRF--GDRPALAVERFD 80 (81)
T ss_dssp SEEEE-S-CEEETTHHHHHHHHHHHHHH-TT-----EEEEEE--TTEEEEEEE-TT
T ss_pred eEEEeCCCcccccchHHHHHHHHHHHHH-cCCCcCceEEEEE--CCeEEEEEeCCC
Confidence 8999998865 55667889988876554 5899998776443 346777776643
No 477
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=83.55 E-value=9.2 Score=39.22 Aligned_cols=79 Identities=23% Similarity=0.225 Sum_probs=48.2
Q ss_pred ceeeeeeeCCccccceEEEEeC--Ccc-----EEEEecCCC----CcchHHHHHHHHHHHHhcCCCCCccceeecccCCC
Q 022304 23 HITKICPVGGGCINLASRYGTD--AGS-----FFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTG 91 (299)
Q Consensus 23 ~~~~~~~~~~G~~n~~y~v~~~--~g~-----~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~ 91 (299)
.+.....+|.|....||+-+.. +|+ +-+|--... ....+-.|+.+++.+.. -.|-+++..+-. .+
T Consensus 693 ~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~H---pNiv~liGv~l~-~~ 768 (1025)
T KOG1095|consen 693 NVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDH---PNIVSLIGVCLD-SG 768 (1025)
T ss_pred heEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCC---cceeeEEEeecC-CC
Confidence 4445677899999999997653 342 333332221 11334456655555542 234555565544 67
Q ss_pred ceEEEEecccCCCC
Q 022304 92 GSYIIMEFIEFGSS 105 (299)
Q Consensus 92 ~~~~v~e~l~G~~~ 105 (299)
.+++++||++|+++
T Consensus 769 ~~~i~leyM~gGDL 782 (1025)
T KOG1095|consen 769 PPLILLEYMEGGDL 782 (1025)
T ss_pred CcEEEehhcccCcH
Confidence 89999999999854
No 478
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=81.74 E-value=2 Score=39.70 Aligned_cols=56 Identities=20% Similarity=0.133 Sum_probs=40.5
Q ss_pred HHHHHHHHHHHhccccCCCCCcceeccCCCCCCeeecCCCCeEEEccc-c---ccCCchhhhhhh
Q 022304 176 YQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA-C---YYGHNEAEFGMS 236 (299)
Q Consensus 176 ~~~~~~~~~~l~~~l~~~~~~~~liHgDl~~~Nvl~~~~~~~~iID~~-~---~~g~~~~Dla~~ 236 (299)
...+.++++.+..+. ..++-|+|++|.|||+.+...+-|=||. | ..-+|..|...+
T Consensus 113 rnim~QilqGL~hiH-----k~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~SkpPYTeYVST 172 (538)
T KOG0661|consen 113 RNIMYQILQGLAHIH-----KHGFFHRDLKPENILISGNDVIKIADFGLAREVRSKPPYTEYVST 172 (538)
T ss_pred HHHHHHHHHHHHHHH-----hcCcccccCChhheEecccceeEecccccccccccCCCcchhhhc
Confidence 445556666665443 4699999999999999865557788974 3 367888888754
No 479
>KOG1236 consensus Predicted unusual protein kinase [General function prediction only]
Probab=81.48 E-value=0.73 Score=42.14 Aligned_cols=25 Identities=24% Similarity=0.298 Sum_probs=18.3
Q ss_pred cceeccCCCCCCeeecCCCC----eEEEc
Q 022304 197 PCLLHGDLWSGNISSDKNGE----PVILD 221 (299)
Q Consensus 197 ~~liHgDl~~~Nvl~~~~~~----~~iID 221 (299)
--++|+|+|||||++..+.. .+++|
T Consensus 364 DNFvHaDlHPGNVlirf~~t~~~~~~~~~ 392 (565)
T KOG1236|consen 364 DNFVHADLHPGNVLIRFNKTEDNLRGVHK 392 (565)
T ss_pred hcceecccCCCcEEEEecCCCcccccccc
Confidence 36899999999999854322 35655
No 480
>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]
Probab=79.63 E-value=5.3 Score=36.23 Aligned_cols=29 Identities=24% Similarity=0.201 Sum_probs=25.3
Q ss_pred CCcceeccCCCCCCeeecCCCCeEEEcccc
Q 022304 195 VEPCLLHGDLWSGNISSDKNGEPVILDPAC 224 (299)
Q Consensus 195 ~~~~liHgDl~~~Nvl~~~~~~~~iID~~~ 224 (299)
....+-|.|++-+|||++ +|.+.+||+.+
T Consensus 339 kkf~fehrnlt~~niLId-~GnvtLIDfkl 367 (488)
T COG5072 339 KKFPFEHRNLTLDNILID-EGNVTLIDFKL 367 (488)
T ss_pred hcCCcccccccccceeee-cCceEEEEeee
Confidence 567899999999999998 66799999854
No 481
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=79.26 E-value=1.2 Score=35.83 Aligned_cols=73 Identities=18% Similarity=0.077 Sum_probs=44.8
Q ss_pred eeeeeCCccccceEEEEeCCc--cEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEe
Q 022304 26 KICPVGGGCINLASRYGTDAG--SFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME 98 (299)
Q Consensus 26 ~~~~~~~G~~n~~y~v~~~~g--~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e 98 (299)
+.+++|.|....||+....+. -+.+|..+-+ -+...-+|+-+++.|..+. +.+++..--+ +..-.++++
T Consensus 6 kmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhkn---ivrl~dvlhs-dkkltlvfe 81 (292)
T KOG0662|consen 6 KMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKN---IVRLHDVLHS-DKKLTLVFE 81 (292)
T ss_pred HHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcc---eeehhhhhcc-CceeEEeHH
Confidence 568899999999999876443 3445655421 2344568888888887653 3333332211 345667777
Q ss_pred cccC
Q 022304 99 FIEF 102 (299)
Q Consensus 99 ~l~G 102 (299)
+++-
T Consensus 82 ~cdq 85 (292)
T KOG0662|consen 82 FCDQ 85 (292)
T ss_pred HhhH
Confidence 7643
No 482
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=78.35 E-value=4.3 Score=34.70 Aligned_cols=28 Identities=25% Similarity=0.304 Sum_probs=24.3
Q ss_pred CcceeccCCCCCCeeecCCCCeEEEccc
Q 022304 196 EPCLLHGDLWSGNISSDKNGEPVILDPA 223 (299)
Q Consensus 196 ~~~liHgDl~~~Nvl~~~~~~~~iID~~ 223 (299)
..-++|+|.++.|||+++++...+-||.
T Consensus 142 r~kilHRDmKaaNvLIt~dgilklADFG 169 (376)
T KOG0669|consen 142 RNKILHRDMKAANVLITKDGILKLADFG 169 (376)
T ss_pred HhhHHhhcccHhhEEEcCCceEEeeccc
Confidence 3568999999999999999878888873
No 483
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=77.93 E-value=29 Score=34.35 Aligned_cols=72 Identities=15% Similarity=0.009 Sum_probs=44.4
Q ss_pred eCCccccceEEEEeCCc--cEEEEecCC-CCc--chHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEEEecccCCC
Q 022304 30 VGGGCINLASRYGTDAG--SFFVKTNRS-IGP--SMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGS 104 (299)
Q Consensus 30 ~~~G~~n~~y~v~~~~g--~~vlK~~~~-~~~--~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~~ 104 (299)
+|-|.+..||--+.-+. +..+|--+. +.+ .-+-.|+.+.+.|+... +.+-+..... .|..-+.||-++|+.
T Consensus 583 LGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkN---IVrYLGs~se-nGf~kIFMEqVPGGS 658 (1226)
T KOG4279|consen 583 LGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKN---IVRYLGSVSE-NGFFKIFMEQVPGGS 658 (1226)
T ss_pred eecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHh---HHHHhhccCC-CCeEEEEeecCCCCc
Confidence 56677777887765333 667775543 211 22567898888887642 2333333221 466678999999984
Q ss_pred C
Q 022304 105 S 105 (299)
Q Consensus 105 ~ 105 (299)
+
T Consensus 659 L 659 (1226)
T KOG4279|consen 659 L 659 (1226)
T ss_pred H
Confidence 4
No 484
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=77.36 E-value=1.6 Score=38.28 Aligned_cols=72 Identities=11% Similarity=0.105 Sum_probs=45.2
Q ss_pred eeeCCccccceEEEEeCCc------cEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCCccceeecccCCCceEEE
Q 022304 28 CPVGGGCINLASRYGTDAG------SFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII 96 (299)
Q Consensus 28 ~~~~~G~~n~~y~v~~~~g------~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v 96 (299)
-.|+.|....||+....++ .|.+|..... -....-+|..+++.|+...-+...+|+..- +...+++
T Consensus 30 g~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~---d~~v~l~ 106 (438)
T KOG0666|consen 30 GKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSH---DKKVWLL 106 (438)
T ss_pred ceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhcc---CceEEEE
Confidence 3688999999999743221 4666655421 112245899999999764223334444332 4678999
Q ss_pred EecccC
Q 022304 97 MEFIEF 102 (299)
Q Consensus 97 ~e~l~G 102 (299)
++|.+-
T Consensus 107 fdYAEh 112 (438)
T KOG0666|consen 107 FDYAEH 112 (438)
T ss_pred ehhhhh
Confidence 999865
No 485
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=76.62 E-value=1.4 Score=42.31 Aligned_cols=27 Identities=30% Similarity=0.404 Sum_probs=22.8
Q ss_pred CcceeccCCCCCCeeecCCCCeEEEcc
Q 022304 196 EPCLLHGDLWSGNISSDKNGEPVILDP 222 (299)
Q Consensus 196 ~~~liHgDl~~~Nvl~~~~~~~~iID~ 222 (299)
...+||+||+.||||++-+|.+-+-||
T Consensus 148 s~~iIHRDLKAGNiL~TldGdirLADF 174 (1187)
T KOG0579|consen 148 SQNIIHRDLKAGNILLTLDGDIRLADF 174 (1187)
T ss_pred hcchhhhhccccceEEEecCcEeeecc
Confidence 357999999999999998887777665
No 486
>smart00146 PI3Kc Phosphoinositide 3-kinase, catalytic domain. Phosphoinositide 3-kinase isoforms participate in a variety of processes, including cell motility, the Ras pathway, vesicle trafficking and secretion, and apoptosis. These homologues may be either lipid kinases and/or protein kinases: the former phosphorylate the 3-position in the inositol ring of inositol phospholipids. The ataxia telangiectesia-mutated gene produced, the targets of rapamycin (TOR) and the DNA-dependent kinase have not been found to possess lipid kinase activity. Some of this family possess PI-4 kinase activities.
Probab=75.97 E-value=2.2 Score=35.16 Aligned_cols=29 Identities=31% Similarity=0.241 Sum_probs=23.3
Q ss_pred cceeccCCCCCCeeecCCCCeEEEccccc
Q 022304 197 PCLLHGDLWSGNISSDKNGEPVILDPACY 225 (299)
Q Consensus 197 ~~liHgDl~~~Nvl~~~~~~~~iID~~~~ 225 (299)
+.+-=||=|++|||++++|...-||+...
T Consensus 101 YilglgDRh~~NIli~~~G~v~hIDfg~~ 129 (202)
T smart00146 101 YILGLGDRHNDNIMLDKTGHLFHIDFGFI 129 (202)
T ss_pred HHhcCCCCCCCcEEEeCCCCEEEEechhh
Confidence 45556899999999998887888997543
No 487
>PF03109 ABC1: ABC1 family; InterPro: IPR004147 This entry includes ABC1 from yeast [] and AarF from Escherichia coli []. These proteins have a nuclear or mitochondrial subcellular location in eukaryotes. The exact molecular functions of these proteins is not clear, however yeast ABC1 suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex [] and E. coli AarF is required for ubiquinone production []. It has been suggested that members of the ABC1 family are novel chaperonins []. These proteins are unrelated to the ABC transporter proteins.
Probab=74.38 E-value=1.8 Score=32.37 Aligned_cols=46 Identities=20% Similarity=0.149 Sum_probs=36.7
Q ss_pred eeeCCccccceEEEEeCCc-cEEEEecCCCCcchHHHHHHHHHHHHh
Q 022304 28 CPVGGGCINLASRYGTDAG-SFFVKTNRSIGPSMFEGEALGLGAMYE 73 (299)
Q Consensus 28 ~~~~~G~~n~~y~v~~~~g-~~vlK~~~~~~~~~~~~E~~~l~~L~~ 73 (299)
+|++.|...+||+.++.+| .++||+-+++-...+......++.+..
T Consensus 17 ~PlasASiaQVh~a~l~~g~~VaVKV~rP~i~~~i~~Dl~~l~~~~~ 63 (119)
T PF03109_consen 17 EPLASASIAQVHRARLKDGEEVAVKVQRPGIEEQIEADLRILRRLAR 63 (119)
T ss_pred chhhheehhhheeeeecccchhhhhhcchHHHHHHHHHHHHHHHHHH
Confidence 5788888899999998766 899999887656667777777777765
No 488
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=74.36 E-value=4 Score=39.65 Aligned_cols=28 Identities=32% Similarity=0.270 Sum_probs=25.4
Q ss_pred CcceeccCCCCCCeeecCCCCeEEEccc
Q 022304 196 EPCLLHGDLWSGNISSDKNGEPVILDPA 223 (299)
Q Consensus 196 ~~~liHgDl~~~Nvl~~~~~~~~iID~~ 223 (299)
..++.|.|++++|+++..++...|+|+.
T Consensus 438 ~~GiahrdlK~enll~~~~g~lki~Dfg 465 (601)
T KOG0590|consen 438 SMGLAHRDLKLENLLVTENGILKIIDFG 465 (601)
T ss_pred hcCceeccCccccEEEecCCceEEeecC
Confidence 5699999999999999999888999975
No 489
>cd05172 PIKKc_DNA-PK DNA-dependent protein kinase (DNA-PK), catalytic domain; The DNA-PK catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. DNA-PK is a member of the phosphoinositide 3-kinase-related protein kinase (PIKK) subfamily. PIKKs have intrinsic serine/threonine kinase activity and are distinguished from other PKs by their unique catalytic domain, similar to that of lipid PI3K, and their large molecular weight (240-470 kDa). DNA-PK is comprised of a regulatory subunit, containing the Ku70/80 subunit, and a catalytic subunit, which contains a NUC194 domain of unknown function, a FAT (FRAP, ATM and TRRAP) domain, a catalytic domain, and a FATC domain at the C-terminus. It is part of a multi-component system involved in non-homologous end joining (NHEJ), a process of repairing double st
Probab=74.04 E-value=2.4 Score=35.86 Aligned_cols=32 Identities=28% Similarity=0.223 Sum_probs=25.4
Q ss_pred CcceeccCCCCCCeeec-CCCCeEEEccccccC
Q 022304 196 EPCLLHGDLWSGNISSD-KNGEPVILDPACYYG 227 (299)
Q Consensus 196 ~~~liHgDl~~~Nvl~~-~~~~~~iID~~~~~g 227 (299)
.+.+-=||=|++|||++ .+|...-||+...++
T Consensus 135 ~YilglgDRH~~NIli~~~tG~v~HIDfg~~f~ 167 (235)
T cd05172 135 HWILGIGDRHLSNFLVDLETGGLVGIDFGHAFG 167 (235)
T ss_pred hheeeccCCCcccEEEECCCCcEEEEeeHhhhc
Confidence 46777799999999998 467788899865443
No 490
>cd05170 PIKKc_SMG1 Suppressor of morphogenetic effect on genitalia-1 (SMG-1), catalytic domain; The SMG-1 catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. SMG-1 is a member of the phosphoinositide 3-kinase-related protein kinase (PIKK) subfamily. PIKKs have intrinsic serine/threonine kinase activity and are distinguished from other PKs by their unique catalytic domain, similar to that of lipid PI3K, and their large molecular weight (240-470 kDa). In addition to its catalytic domain, SMG-1 contains a FATC (FRAP, ATM and TRRAP, C-terminal) domain at the C-terminus. SMG-1 plays a critical role in the mRNA surveillance mechanism known as non-sense mediated mRNA decay (NMD). NMD protects the cells from the accumulation of aberrant mRNAs with premature termination codons (PTCs) generated by geno
Probab=71.08 E-value=3 Score=36.85 Aligned_cols=33 Identities=27% Similarity=0.314 Sum_probs=26.2
Q ss_pred CCcceeccCCCCCCeeec-CCCCeEEEccccccC
Q 022304 195 VEPCLLHGDLWSGNISSD-KNGEPVILDPACYYG 227 (299)
Q Consensus 195 ~~~~liHgDl~~~Nvl~~-~~~~~~iID~~~~~g 227 (299)
..+.+-=||-|++|||++ .+|...-||+..+++
T Consensus 207 ~~yilglgDRh~~NIli~~~tG~v~hiDf~~~f~ 240 (307)
T cd05170 207 IGYVIGLGDRHLDNVLIDLKTGEVVHIDYNVCFE 240 (307)
T ss_pred HHHHccCCCCCCccEEEEcCCCcEEEEeeHhhhc
Confidence 356777899999999998 467788899875543
No 491
>cd00142 PI3Kc_like Phosphoinositide 3-kinase (PI3K)-like family, catalytic domain; The PI3K-like catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. Members of the family include PI3K, phosphoinositide 4-kinase (PI4K), PI3K-related protein kinases (PIKKs), and TRansformation/tRanscription domain-Associated Protein (TRRAP). PI3Ks catalyze the transfer of the gamma-phosphoryl group from ATP to the 3-hydroxyl of the inositol ring of D-myo-phosphatidylinositol (PtdIns) or its derivatives, while PI4K catalyze the phosphorylation of the 4-hydroxyl of PtdIns. PIKKs are protein kinases that catalyze the phosphorylation of serine/threonine residues, especially those that are followed by a glutamine. PI3Ks play an important role in a variety of fundamental cellular processes, including cell motility, the
Probab=69.14 E-value=3.5 Score=34.42 Aligned_cols=29 Identities=28% Similarity=0.184 Sum_probs=23.5
Q ss_pred cceeccCCCCCCeeecC-CCCeEEEccccc
Q 022304 197 PCLLHGDLWSGNISSDK-NGEPVILDPACY 225 (299)
Q Consensus 197 ~~liHgDl~~~Nvl~~~-~~~~~iID~~~~ 225 (299)
+.+-=||=|++|||++. +|...-||+...
T Consensus 128 YilglgDRh~~NIli~~~~G~~~hIDfg~~ 157 (219)
T cd00142 128 YILGIGDRHPDNIMIDLDTGKLFHIDFGFI 157 (219)
T ss_pred HHhccCCCCCccEEEECCCCeEEEEeeHHh
Confidence 45566899999999998 777888998643
No 492
>cd05171 PIKKc_ATM Ataxia telangiectasia mutated (ATM), catalytic domain; The ATM catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. ATM is a member of the phosphoinositide 3-kinase-related protein kinase (PIKK) subfamily. PIKKs have intrinsic serine/threonine kinase activity and are distinguished from other PKs by their unique catalytic domain, similar to that of lipid PI3K, and their large molecular weight (240-470 kDa). ATM contains a FAT (FRAP, ATM and TRRAP) domain, a catalytic domain, and a FATC domain at the C-terminus. ATM is critical in the response to DNA double strand breaks (DSBs) caused by radiation. It is activated at the site of a DSB and phosphorylates key substrates that trigger pathways that regulate DNA repair and cell cycle checkpoints at the G1/S, S phase, and G2/M transi
Probab=69.03 E-value=3.6 Score=35.81 Aligned_cols=32 Identities=31% Similarity=0.285 Sum_probs=25.8
Q ss_pred CCcceeccCCCCCCeeecC-CCCeEEEcccccc
Q 022304 195 VEPCLLHGDLWSGNISSDK-NGEPVILDPACYY 226 (299)
Q Consensus 195 ~~~~liHgDl~~~Nvl~~~-~~~~~iID~~~~~ 226 (299)
..+.+-=||=|++|||++. +|...-||+...+
T Consensus 179 ~~yilglgDRh~~NIll~~~tG~v~hiDf~~~f 211 (279)
T cd05171 179 VGYILGLGDRHANNILIDEKTAEVVHIDLGIAF 211 (279)
T ss_pred HHHhhccCCCCcccEEEEcCcCcEEEEechhhh
Confidence 3567778999999999984 6778899987554
No 493
>cd00892 PIKKc_ATR ATR (Ataxia telangiectasia and Rad3-related), catalytic domain; The ATR catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. ATR is also referred to as Mei-41 (Drosophila), Esr1/Mec1p (Saccharomyces cerevisiae), Rad3 (Schizosaccharomyces pombe), and FRAP-related protein (human). ATR is a member of the phosphoinositide 3-kinase-related protein kinase (PIKK) subfamily. PIKKs have intrinsic serine/threonine kinase activity and are distinguished from other PKs by their unique catalytic domain, similar to that of lipid PI3K, and their large molecular weight (240-470 kDa). ATR contains a UME domain of unknown function, a FAT (FRAP, ATM and TRRAP) domain, a catalytic domain, and a FATC domain at the C-terminus. Together with its downstream effector kinase, Chk1, ATR plays a central
Probab=68.95 E-value=3.6 Score=34.85 Aligned_cols=32 Identities=31% Similarity=0.383 Sum_probs=24.9
Q ss_pred CcceeccCCCCCCeeecC-CCCeEEEccccccC
Q 022304 196 EPCLLHGDLWSGNISSDK-NGEPVILDPACYYG 227 (299)
Q Consensus 196 ~~~liHgDl~~~Nvl~~~-~~~~~iID~~~~~g 227 (299)
.+.+-=||=|++|||++. +|...-||+...+|
T Consensus 138 ~YilgigDRh~~NIli~~~tG~~~HIDfg~~~~ 170 (237)
T cd00892 138 GYILGLGDRHGENILFDSNTGDVVHVDFNCLFD 170 (237)
T ss_pred HHHhccCCCCcccEEEEcCCCcEEEEehHhhhc
Confidence 356666999999999997 77788899864433
No 494
>cd05168 PI4Kc_III_beta Phosphoinositide 4-kinase (PI4K), Type III, beta isoform, catalytic domain; The PI4K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. PI4Ks catalyze the transfer of the gamma-phosphoryl group from ATP to the 4-hydroxyl of the inositol ring of D-myo-phosphatidylinositol (PtdIns) to generate PtdIns(4)P, the major precursor in the synthesis of other phosphoinositides including PtdIns(4,5)P2, PtdIns(3,4)P2, and PtdIns(3,4,5)P3. Two isoforms of type III PI4K, alpha and beta, exist in most eukaryotes. PI4KIIIbeta (also called Pik1p in yeast) is a 110 kDa protein that is localized to the Golgi and the nucleus. It is required for maintaining the structural integrity of the Golgi complex (GC), and is a key regulator of protein transport from the GC to the plasma membrane. PI4KII
Probab=68.64 E-value=3.5 Score=36.07 Aligned_cols=31 Identities=26% Similarity=0.225 Sum_probs=24.8
Q ss_pred CcceeccCCCCCCeeecCCCCeEEEcccccc
Q 022304 196 EPCLLHGDLWSGNISSDKNGEPVILDPACYY 226 (299)
Q Consensus 196 ~~~liHgDl~~~Nvl~~~~~~~~iID~~~~~ 226 (299)
.+.|==||=|.+|||++.+|...-||+..++
T Consensus 140 ~YvLGigDRH~~NILi~~~G~liHIDFG~~f 170 (293)
T cd05168 140 CYLLQIKDRHNGNILIDNDGHIIHIDFGFML 170 (293)
T ss_pred HHHhhccccCCCceEEcCCCCEEEEehHHhh
Confidence 3556668999999999998888889985433
No 495
>cd00891 PI3Kc Phosphoinositide 3-kinase (PI3K), catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. PI3Ks catalyze the transfer of the gamma-phosphoryl group from ATP to the 3-hydroxyl of the inositol ring of D-myo-phosphatidylinositol (PtdIns) or its derivatives. PI3Ks play an important role in a variety of fundamental cellular processes, including cell motility, the Ras pathway, vesicle trafficking and secretion, immune cell activation and apoptosis. They can be divided into three main classes (I, II, and III), defined by their substrate specificity, regulation, and domain structure. Class I PI3Ks are the only enzymes capable of converting PtdIns(4,5)P2 to the critical second messenger PtdIns(3,4,5)P3. Class I enzymes are heterodimers and exist in multiple isoforms c
Probab=68.36 E-value=3.3 Score=37.28 Aligned_cols=32 Identities=28% Similarity=0.301 Sum_probs=26.0
Q ss_pred CcceeccCCCCCCeeecCCCCeEEEccccccC
Q 022304 196 EPCLLHGDLWSGNISSDKNGEPVILDPACYYG 227 (299)
Q Consensus 196 ~~~liHgDl~~~Nvl~~~~~~~~iID~~~~~g 227 (299)
.+.|==||=|.+|||++.+|...-||+..++|
T Consensus 202 ~YiLgigDRH~~NILi~~~G~~~HIDFG~ilg 233 (352)
T cd00891 202 TYVLGIGDRHNDNIMLTKTGHLFHIDFGHFLG 233 (352)
T ss_pred HHHccccccCCCceEECCCCCEEEEehHHhhc
Confidence 45666799999999999888888999865544
No 496
>cd05169 PIKKc_TOR TOR (Target of rapamycin), catalytic domain; The TOR catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. TOR is a member of the phosphoinositide 3-kinase-related protein kinase (PIKK) subfamily. PIKKs have intrinsic serine/threonine kinase activity and are distinguished from other PKs by their unique catalytic domain, similar to that of lipid PI3K, and their large molecular weight (240-470 kDa). TOR contains a rapamycin binding domain, a catalytic domain, and a FATC (FRAP, ATM and TRRAP, C-terminal) domain at the C-terminus. It is also called FRAP (FK506 binding protein 12-rapamycin associated protein). TOR is a central component of the eukaryotic growth regulatory network. It controls the expression of many genes transcribed by all three RNA polymerases. It associates with
Probab=68.16 E-value=3.1 Score=36.16 Aligned_cols=31 Identities=29% Similarity=0.272 Sum_probs=25.6
Q ss_pred CCcceeccCCCCCCeeecC-CCCeEEEccccc
Q 022304 195 VEPCLLHGDLWSGNISSDK-NGEPVILDPACY 225 (299)
Q Consensus 195 ~~~~liHgDl~~~Nvl~~~-~~~~~iID~~~~ 225 (299)
..+.+-=||=|++|||++. +|...-||+...
T Consensus 179 ~~YilglgDRH~~NIll~~~tG~v~HIDfg~~ 210 (280)
T cd05169 179 VGYILGLGDRHPSNIMIDRLTGKVIHIDFGDC 210 (280)
T ss_pred HHhheeccCCCcceEEEEcCCCCEEEEecHHH
Confidence 3577888999999999987 777888998643
No 497
>cd05164 PIKKc Phosphoinositide 3-kinase-related protein kinase (PIKK) subfamily, catalytic domain; The PIKK catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. Members include ATM (Ataxia telangiectasia mutated), ATR (Ataxia telangiectasia and Rad3-related), TOR (Target of rapamycin), SMG-1 (Suppressor of morphogenetic effect on genitalia-1), and DNA-PK (DNA-dependent protein kinase). PIKKs have intrinsic serine/threonine kinase activity and are distinguished from other PKs by their unique catalytic domain, similar to that of lipid PI3K, and their large molecular weight (240-470 kDa). They show strong preference for phosphorylating serine/threonine residues followed by a glutamine and are also referred to as (S/T)-Q-directed kinases. They all contain a FATC (FRAP, ATM and TRRAP, C-terminal) d
Probab=67.34 E-value=3.9 Score=34.23 Aligned_cols=30 Identities=37% Similarity=0.395 Sum_probs=23.8
Q ss_pred CcceeccCCCCCCeeecC-CCCeEEEccccc
Q 022304 196 EPCLLHGDLWSGNISSDK-NGEPVILDPACY 225 (299)
Q Consensus 196 ~~~liHgDl~~~Nvl~~~-~~~~~iID~~~~ 225 (299)
.+.+-=||-|++|||++. +|...-||+...
T Consensus 130 ~YvlglgDRh~~NIli~~~tG~v~hIDf~~~ 160 (222)
T cd05164 130 GYILGLGDRHLDNILIDRETGEVVHIDFGCI 160 (222)
T ss_pred HHHhccCCCCCceEEEECCCCcEEEEccHHh
Confidence 356666999999999998 677778998643
No 498
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=66.61 E-value=2.9 Score=42.94 Aligned_cols=43 Identities=12% Similarity=0.069 Sum_probs=30.4
Q ss_pred HHHHHHhcCCCcceeeeeeeCCccccceEEEEeCCccEEEEecCC
Q 022304 11 IREWILSEGKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRS 55 (299)
Q Consensus 11 i~~~l~~~~~~~~~~~~~~~~~G~~n~~y~v~~~~g~~vlK~~~~ 55 (299)
...++.+. .. ++.-.+.+|.+..=.+.|..+.+|-+|+|.+-.
T Consensus 14 ~e~yfsd~-~~-e~~~~~~LGstRFlKv~r~k~~eG~vVvKVFvk 56 (1431)
T KOG1240|consen 14 VEVYFSDL-SV-ECHYVENLGSTRFLKVARAKDREGLVVVKVFVK 56 (1431)
T ss_pred HHHHhhcC-cc-ceeeecccCchhhhhhhhccCCCceEEEEEEec
Confidence 34455555 22 666777888776667888988999888888754
No 499
>cd00893 PI4Kc_III Phosphoinositide 4-kinase (PI4K), Type III, catalytic domain; The PI4K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. PI4Ks catalyze the transfer of the gamma-phosphoryl group from ATP to the 4-hydroxyl of the inositol ring of D-myo-phosphatidylinositol (PtdIns) to generate PtdIns(4)P, the major precursor in the synthesis of other phosphoinositides including PtdIns(4,5)P2, PtdIns(3,4)P2, and PtdIns(3,4,5)P3. There are two types of PI4Ks, types II and III. Type II PI4Ks lack the characteristic catalytic kinase domain present in PI3Ks and type III PI4Ks, and are excluded from this family. Two isoforms of type III PI4K, alpha and beta, exist in most eukaryotes.
Probab=65.69 E-value=4.5 Score=35.36 Aligned_cols=30 Identities=27% Similarity=0.216 Sum_probs=24.4
Q ss_pred CcceeccCCCCCCeeecCCCCeEEEccccc
Q 022304 196 EPCLLHGDLWSGNISSDKNGEPVILDPACY 225 (299)
Q Consensus 196 ~~~liHgDl~~~Nvl~~~~~~~~iID~~~~ 225 (299)
.+.|==||=|.+|||++.+|...-||+.-+
T Consensus 138 ~YiLgigDRH~~NILid~~G~liHIDFG~i 167 (289)
T cd00893 138 CYLLQIKDRHNGNILLDSDGHIIHIDFGFI 167 (289)
T ss_pred HHHhhccccCCCceEECCCCCEEEEehHHh
Confidence 355666999999999999888888998533
No 500
>PF13575 DUF4135: Domain of unknown function (DUF4135)
Probab=65.55 E-value=4.3 Score=36.88 Aligned_cols=26 Identities=27% Similarity=0.373 Sum_probs=20.4
Q ss_pred cCCCCCCeeecCCCCeEEEccccccCC
Q 022304 202 GDLWSGNISSDKNGEPVILDPACYYGH 228 (299)
Q Consensus 202 gDl~~~Nvl~~~~~~~~iID~~~~~g~ 228 (299)
.|+|.+||+..++ .|.+||.++.+.+
T Consensus 153 ~DlH~ENIIa~g~-~PvlIDlETlf~~ 178 (370)
T PF13575_consen 153 TDLHFENIIASGE-YPVLIDLETLFHP 178 (370)
T ss_pred CcccccceEEeCC-CcEEEehhhhCCc
Confidence 6999999999755 4999997655444
Done!