BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>022305
MANLYRLTLQQRHRLPPVSTGVSSGYSTCLSCVSGVSKKSDCRRFKASRRLVVGLGAAFC
SQFMTMAGTLGANSLIASARQRGAVEQVLKDVQWPEQFPFKEEDFQRFDESPDSLFYETP
RFVTHIDDPAIAALTKYYSEVFPPSNTPGVSHFPPGYKQDRIVGMGMNEEELKRNPVLTE
YVVQDLNLNPKLPFEDNSFDVITNVVSVDYLTKPIEVFKEMCQVLKPGGLAIVSFSNRCF
WTKAISIWTSTGDADHVMIVGAYFHYAGGYEPPQAVDISPNPGRSDPMYVVYSRKASTA

High Scoring Gene Products

Symbol, full name Information P value
AT4G29590 protein from Arabidopsis thaliana 1.8e-101
AT3G01660 protein from Arabidopsis thaliana 5.2e-33

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  022305
        (299 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2134333 - symbol:AT4G29590 species:3702 "Arabi...  1006  1.8e-101  1
TAIR|locus:2084238 - symbol:AT3G01660 "AT3G01660" species...   360  5.2e-33   1


>TAIR|locus:2134333 [details] [associations]
            symbol:AT4G29590 species:3702 "Arabidopsis thaliana"
            [GO:0008152 "metabolic process" evidence=IEA] [GO:0008168
            "methyltransferase activity" evidence=IEA] [GO:0009507
            "chloroplast" evidence=ISM;IDA] InterPro:IPR013216 Pfam:PF08241
            GO:GO:0009507 EMBL:CP002687 EMBL:AL161575 GO:GO:0008168
            EMBL:AL079344 IPI:IPI00536728 PIR:T09922 RefSeq:NP_194688.1
            UniGene:At.3482 ProteinModelPortal:Q9SU88 SMR:Q9SU88 STRING:Q9SU88
            PRIDE:Q9SU88 EnsemblPlants:AT4G29590.1 GeneID:829080
            KEGG:ath:AT4G29590 TAIR:At4g29590 InParanoid:Q9SU88 OMA:IDVFKEM
            PhylomeDB:Q9SU88 ProtClustDB:CLSN2915816 ArrayExpress:Q9SU88
            Genevestigator:Q9SU88 Uniprot:Q9SU88
        Length = 317

 Score = 1006 (359.2 bits), Expect = 1.8e-101, P = 1.8e-101
 Identities = 197/265 (74%), Positives = 216/265 (81%)

Query:    44 RFKASRRLVVG-LGAAFCSQFMTMAGTLGANSLIASARQRGA--VEQVLKDVQWPEQFPF 100
             R  + RRLV+G  G A       M+G  G  S IASARQ     VEQ L  V WPE FPF
Sbjct:    49 RASSRRRLVLGGFGGASLWMNNNMSGKFGGKSFIASARQTNPSPVEQALNKVDWPETFPF 108

Query:   101 KEEDFQRFDESPDSLFYETPRFVTHIDDPAIAALTKYYSEVFPPSNTPGVS--------- 151
             KEEDFQR+DES DS FYE PRFVTHIDDPAIAALTKYYS+V P S+TPGVS         
Sbjct:   109 KEEDFQRYDESSDSTFYEAPRFVTHIDDPAIAALTKYYSKVLPQSDTPGVSILDMCSSWV 168

Query:   152 -HFPPGYKQDRIVGMGMNEEELKRNPVLTEYVVQDLNLNPKLPFEDNSFDVITNVVSVDY 210
              H+PPGY+Q+RIVGMGMNEEELKRNPVLTEY+VQDLNLN  LPFEDNSF VITNVVSVDY
Sbjct:   169 SHYPPGYRQERIVGMGMNEEELKRNPVLTEYIVQDLNLNSNLPFEDNSFQVITNVVSVDY 228

Query:   211 LTKPIEVFKEMCQVLKPGGLAIVSFSNRCFWTKAISIWTSTGDADHVMIVGAYFHYAGGY 270
             LTKP+EVFKEM ++LKPGGLA++SFSNRCF+TKAISIWTSTGDADH +IVG+YFHYAGG+
Sbjct:   229 LTKPLEVFKEMNRILKPGGLALMSFSNRCFFTKAISIWTSTGDADHALIVGSYFHYAGGF 288

Query:   271 EPPQAVDISPNPGRSDPMYVVYSRK 295
             E PQAVDISPNPGRSDPMYVVYSRK
Sbjct:   289 EAPQAVDISPNPGRSDPMYVVYSRK 313


>TAIR|locus:2084238 [details] [associations]
            symbol:AT3G01660 "AT3G01660" species:3702 "Arabidopsis
            thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008152
            "metabolic process" evidence=IEA] [GO:0008168 "methyltransferase
            activity" evidence=IEA] [GO:0000023 "maltose metabolic process"
            evidence=RCA] [GO:0016556 "mRNA modification" evidence=RCA]
            [GO:0019252 "starch biosynthetic process" evidence=RCA]
            InterPro:IPR013216 Pfam:PF08241 EMBL:CP002686
            GenomeReviews:BA000014_GR EMBL:AC009325 GO:GO:0008168 EMBL:BT010699
            EMBL:BT012427 IPI:IPI00527721 RefSeq:NP_186815.1 UniGene:At.41245
            ProteinModelPortal:Q9SS89 SMR:Q9SS89 IntAct:Q9SS89 STRING:Q9SS89
            PaxDb:Q9SS89 PRIDE:Q9SS89 EnsemblPlants:AT3G01660.1 GeneID:821098
            KEGG:ath:AT3G01660 TAIR:At3g01660 eggNOG:NOG27425
            HOGENOM:HOG000010386 InParanoid:Q9SS89 OMA:WVSHLPD PhylomeDB:Q9SS89
            ProtClustDB:CLSN2685010 Genevestigator:Q9SS89 Uniprot:Q9SS89
        Length = 273

 Score = 360 (131.8 bits), Expect = 5.2e-33, P = 5.2e-33
 Identities = 75/191 (39%), Positives = 106/191 (55%)

Query:    96 EQFPFKEEDFQRFDESPDSLFYETPRFVTHIDDPAIAALTKYYSEVFPPSNT------PG 149
             ++     E   + +  PD  FY  PRFV H+DD  I++LT+ Y     P +T        
Sbjct:    46 QRLVLNNEGRTKLNADPDREFYSYPRFVNHVDDSFISSLTELYRNRLRPGSTVLDLMSSW 105

Query:   150 VSHFPPGYKQDRIVGMGMNEEELKRNPVLTEYVVQDLNLNPKLPFEDNSFDVITNVVSVD 209
             VSH P   K +++VG G+N +EL RNP L  + V+DLN + K  FED  FD +   V V 
Sbjct:   106 VSHLPEEVKYEKVVGHGLNAQELARNPRLDYFFVKDLNEDQKFEFEDKYFDAVLCSVGVQ 165

Query:   210 YLTKPIEVFKEMCQVLKPGGLAIVSFSNRCFWTKAISIWTSTGDADHVMIVGAYFHYAGG 269
             YL +P +VF E+ +VLKPGG+ IVSFSNR F+ KAI +W    +   + +V  YF    G
Sbjct:   166 YLQQPEKVFAEVYRVLKPGGVLIVSFSNRMFYEKAIRVWRDGTEYSRIQLVVQYFQSIEG 225

Query:   270 YEPPQAVDISP 280
             +  P+ +   P
Sbjct:   226 FTQPEIIRQQP 236


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.135   0.411    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      299       299   0.00095  115 3  11 22  0.39    34
                                                     33  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  610 (65 KB)
  Total size of DFA:  225 KB (2124 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:01
  No. of threads or processors used:  24
  Search cpu time:  24.99u 0.09s 25.08t   Elapsed:  00:00:02
  Total cpu time:  24.99u 0.09s 25.08t   Elapsed:  00:00:03
  Start:  Thu May  9 15:07:42 2013   End:  Thu May  9 15:07:45 2013

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