Query 022305
Match_columns 299
No_of_seqs 363 out of 2521
Neff 7.8
Searched_HMMs 29240
Date Mon Mar 25 03:19:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022305.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022305hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3h2b_A SAM-dependent methyltra 99.8 1E-19 3.5E-24 155.6 6.7 147 137-296 41-195 (203)
2 4hg2_A Methyltransferase type 99.8 2.6E-19 8.9E-24 160.3 9.5 97 136-236 38-136 (257)
3 3dh0_A SAM dependent methyltra 99.8 4.7E-19 1.6E-23 153.1 9.6 153 128-297 27-194 (219)
4 4gek_A TRNA (CMO5U34)-methyltr 99.8 1.4E-18 4.8E-23 155.8 12.3 101 131-236 64-179 (261)
5 3g5l_A Putative S-adenosylmeth 99.8 1.7E-19 5.8E-24 159.5 5.3 100 137-239 44-149 (253)
6 2p7i_A Hypothetical protein; p 99.8 1.4E-18 4.7E-23 152.0 10.5 102 138-243 43-149 (250)
7 3hnr_A Probable methyltransfer 99.8 1.6E-18 5.4E-23 149.8 10.5 158 129-298 36-214 (220)
8 3l8d_A Methyltransferase; stru 99.8 5.2E-19 1.8E-23 154.9 6.7 141 136-280 52-202 (242)
9 2gs9_A Hypothetical protein TT 99.8 6.4E-18 2.2E-22 145.2 13.3 104 130-239 29-136 (211)
10 3dlc_A Putative S-adenosyl-L-m 99.8 7.7E-19 2.6E-23 150.8 7.0 107 128-237 34-150 (219)
11 3bkw_A MLL3908 protein, S-aden 99.8 8.8E-19 3E-23 153.4 7.1 99 137-238 43-147 (243)
12 3dli_A Methyltransferase; PSI- 99.7 8.3E-19 2.8E-23 154.2 5.1 140 137-280 41-186 (240)
13 1y8c_A S-adenosylmethionine-de 99.7 8.3E-19 2.8E-23 153.5 5.1 100 137-240 37-147 (246)
14 1vlm_A SAM-dependent methyltra 99.7 9.7E-18 3.3E-22 145.4 11.7 151 138-296 48-219 (219)
15 1vl5_A Unknown conserved prote 99.7 3.3E-18 1.1E-22 151.9 8.5 103 130-235 29-140 (260)
16 4htf_A S-adenosylmethionine-de 99.7 2.2E-18 7.4E-23 155.3 5.3 106 131-239 62-177 (285)
17 3ege_A Putative methyltransfer 99.7 1.4E-17 4.8E-22 148.4 10.2 142 130-279 26-179 (261)
18 3thr_A Glycine N-methyltransfe 99.7 6.8E-18 2.3E-22 152.3 7.8 102 137-241 57-181 (293)
19 3cc8_A Putative methyltransfer 99.7 1.6E-17 5.5E-22 143.6 9.4 149 129-281 24-188 (230)
20 2a14_A Indolethylamine N-methy 99.7 4.8E-18 1.6E-22 152.0 5.9 154 139-298 57-262 (263)
21 2yqz_A Hypothetical protein TT 99.7 8.6E-18 2.9E-22 148.8 7.4 98 137-237 39-143 (263)
22 3ocj_A Putative exported prote 99.7 1.2E-17 4.2E-22 152.2 8.7 152 136-297 117-305 (305)
23 3e8s_A Putative SAM dependent 99.7 4.4E-18 1.5E-22 146.8 5.1 162 130-296 44-227 (227)
24 3sm3_A SAM-dependent methyltra 99.7 6.5E-18 2.2E-22 146.7 6.1 99 136-237 29-143 (235)
25 3kkz_A Uncharacterized protein 99.7 1.8E-17 6.1E-22 147.9 8.8 141 137-282 46-200 (267)
26 3ccf_A Cyclopropane-fatty-acyl 99.7 1.3E-17 4.4E-22 149.9 7.7 109 127-239 46-158 (279)
27 1xxl_A YCGJ protein; structura 99.7 1.6E-17 5.3E-22 146.1 7.2 105 130-237 13-126 (239)
28 2ex4_A Adrenal gland protein A 99.7 3.1E-17 1.1E-21 144.1 9.1 148 138-293 80-240 (241)
29 3cgg_A SAM-dependent methyltra 99.7 1.2E-17 4E-22 140.6 6.1 150 129-296 38-195 (195)
30 3dtn_A Putative methyltransfer 99.7 3.3E-17 1.1E-21 142.9 9.0 97 137-237 44-150 (234)
31 3f4k_A Putative methyltransfer 99.7 1.4E-17 4.8E-22 147.2 6.6 139 138-282 47-200 (257)
32 3bus_A REBM, methyltransferase 99.7 2.2E-17 7.7E-22 147.3 7.5 139 137-279 61-217 (273)
33 2g72_A Phenylethanolamine N-me 99.7 1.1E-17 3.9E-22 151.1 5.2 148 138-296 72-280 (289)
34 3g2m_A PCZA361.24; SAM-depende 99.7 6.2E-17 2.1E-21 146.9 10.1 108 129-240 74-195 (299)
35 1nkv_A Hypothetical protein YJ 99.7 2.5E-17 8.5E-22 145.5 7.0 136 137-277 36-186 (256)
36 3jwg_A HEN1, methyltransferase 99.7 2.4E-16 8.1E-21 136.3 12.9 155 137-297 29-211 (219)
37 3g07_A 7SK snRNA methylphospha 99.7 2.8E-17 9.6E-22 149.3 7.1 152 138-296 47-287 (292)
38 3ujc_A Phosphoethanolamine N-m 99.7 1.3E-17 4.3E-22 147.7 4.6 138 138-279 56-207 (266)
39 3ofk_A Nodulation protein S; N 99.7 6.4E-17 2.2E-21 139.4 8.9 147 138-298 52-207 (216)
40 3e23_A Uncharacterized protein 99.7 1.4E-17 4.8E-22 143.2 4.3 152 138-296 44-202 (211)
41 2o57_A Putative sarcosine dime 99.7 1E-17 3.4E-22 151.7 3.5 137 137-278 82-234 (297)
42 2i62_A Nicotinamide N-methyltr 99.7 3.7E-17 1.3E-21 144.8 6.6 149 139-298 58-263 (265)
43 3mgg_A Methyltransferase; NYSG 99.7 7.2E-17 2.5E-21 144.4 8.3 98 137-237 37-144 (276)
44 3d2l_A SAM-dependent methyltra 99.7 4.7E-17 1.6E-21 142.3 6.9 98 137-239 33-141 (243)
45 4fsd_A Arsenic methyltransfera 99.7 1.7E-16 5.8E-21 149.6 10.3 139 137-279 83-252 (383)
46 3i9f_A Putative type 11 methyl 99.7 6.6E-17 2.2E-21 134.2 6.5 138 137-297 17-161 (170)
47 4e2x_A TCAB9; kijanose, tetron 99.7 2E-17 6.8E-22 157.1 3.7 137 137-279 107-254 (416)
48 3pfg_A N-methyltransferase; N, 99.6 4.8E-17 1.7E-21 144.6 4.6 95 137-235 50-151 (263)
49 3gu3_A Methyltransferase; alph 99.6 3.7E-16 1.3E-20 141.0 10.1 97 137-237 22-128 (284)
50 1xtp_A LMAJ004091AAA; SGPP, st 99.6 8.4E-17 2.9E-21 141.8 5.7 148 137-292 93-252 (254)
51 2qe6_A Uncharacterized protein 99.6 2.9E-16 9.8E-21 141.7 8.9 158 137-297 77-274 (274)
52 3ou2_A SAM-dependent methyltra 99.6 5.2E-16 1.8E-20 133.3 9.7 98 137-238 46-149 (218)
53 1pjz_A Thiopurine S-methyltran 99.6 3.9E-17 1.3E-21 140.6 2.6 95 137-234 22-139 (203)
54 3lcc_A Putative methyl chlorid 99.6 3.8E-16 1.3E-20 136.5 8.5 144 139-295 68-226 (235)
55 2aot_A HMT, histamine N-methyl 99.6 1.4E-16 4.7E-21 144.4 5.2 133 139-275 54-218 (292)
56 2kw5_A SLR1183 protein; struct 99.6 2.8E-16 9.5E-21 134.0 6.4 132 140-279 32-172 (202)
57 3g5t_A Trans-aconitate 3-methy 99.6 2.4E-16 8.2E-21 143.1 6.4 95 135-233 34-147 (299)
58 2xvm_A Tellurite resistance pr 99.6 2.3E-16 8E-21 133.6 5.7 94 137-234 32-135 (199)
59 1ve3_A Hypothetical protein PH 99.6 3E-16 1E-20 135.8 6.1 97 138-237 39-144 (227)
60 3vc1_A Geranyl diphosphate 2-C 99.6 3.9E-16 1.3E-20 142.7 6.8 136 138-279 118-270 (312)
61 3orh_A Guanidinoacetate N-meth 99.6 5.5E-16 1.9E-20 136.6 7.3 100 131-233 54-168 (236)
62 2zfu_A Nucleomethylin, cerebra 99.6 3.1E-15 1.1E-19 128.8 11.5 127 137-298 67-193 (215)
63 2p35_A Trans-aconitate 2-methy 99.6 3.4E-16 1.2E-20 138.3 5.1 97 137-237 33-134 (259)
64 3jwh_A HEN1; methyltransferase 99.6 6.6E-16 2.3E-20 133.4 6.8 95 137-234 29-140 (217)
65 2p8j_A S-adenosylmethionine-de 99.6 3.2E-16 1.1E-20 134.0 4.7 97 138-237 24-130 (209)
66 2avn_A Ubiquinone/menaquinone 99.6 5.6E-16 1.9E-20 137.8 6.2 100 137-239 54-156 (260)
67 2vdw_A Vaccinia virus capping 99.6 8.6E-16 2.9E-20 140.5 6.8 103 138-240 49-174 (302)
68 1kpg_A CFA synthase;, cyclopro 99.6 1.1E-15 3.9E-20 137.4 7.2 94 138-237 65-170 (287)
69 3hem_A Cyclopropane-fatty-acyl 99.6 8.1E-16 2.8E-20 139.7 6.2 95 137-237 72-185 (302)
70 2gb4_A Thiopurine S-methyltran 99.6 7.2E-16 2.4E-20 137.5 5.4 95 137-234 68-190 (252)
71 1ri5_A MRNA capping enzyme; me 99.6 4.7E-16 1.6E-20 140.0 4.2 108 131-241 58-180 (298)
72 1wzn_A SAM-dependent methyltra 99.6 4.3E-16 1.5E-20 137.3 2.8 97 137-237 41-147 (252)
73 2fk8_A Methoxy mycolic acid sy 99.6 2.9E-15 9.9E-20 136.9 7.3 96 137-238 90-197 (318)
74 1zx0_A Guanidinoacetate N-meth 99.6 4.6E-15 1.6E-19 130.0 8.1 96 135-234 58-169 (236)
75 3m70_A Tellurite resistance pr 99.6 2.1E-15 7.1E-20 135.8 5.2 103 129-235 111-223 (286)
76 3giw_A Protein of unknown func 99.6 8.5E-15 2.9E-19 131.7 9.1 157 137-296 78-277 (277)
77 2ld4_A Anamorsin; methyltransf 99.5 1.5E-15 5.1E-20 127.0 3.6 82 138-236 13-102 (176)
78 2pxx_A Uncharacterized protein 99.5 3.3E-15 1.1E-19 127.8 5.7 101 136-239 41-163 (215)
79 4df3_A Fibrillarin-like rRNA/T 99.5 5.7E-15 1.9E-19 130.0 6.2 146 136-294 76-230 (233)
80 2r3s_A Uncharacterized protein 99.5 1.4E-14 4.6E-19 133.2 9.1 149 136-296 164-335 (335)
81 3bgv_A MRNA CAP guanine-N7 met 99.5 7.2E-15 2.4E-19 134.2 6.7 101 137-240 34-160 (313)
82 3mq2_A 16S rRNA methyltransfer 99.5 4E-15 1.4E-19 128.5 4.7 146 128-279 17-185 (218)
83 3i53_A O-methyltransferase; CO 99.5 4.4E-14 1.5E-18 130.1 11.6 143 138-295 170-331 (332)
84 1fbn_A MJ fibrillarin homologu 99.5 2.3E-14 7.9E-19 125.2 8.7 137 138-297 75-229 (230)
85 1xdz_A Methyltransferase GIDB; 99.5 1.9E-14 6.3E-19 126.7 7.8 138 137-297 70-220 (240)
86 1af7_A Chemotaxis receptor met 99.5 1.6E-14 5.5E-19 130.3 7.5 119 113-236 83-253 (274)
87 3mti_A RRNA methylase; SAM-dep 99.5 1.3E-14 4.5E-19 121.9 6.5 98 136-236 21-136 (185)
88 3m33_A Uncharacterized protein 99.5 6.1E-15 2.1E-19 128.5 4.5 95 130-232 41-139 (226)
89 3e05_A Precorrin-6Y C5,15-meth 99.5 2.7E-14 9.3E-19 122.1 8.5 138 137-298 40-197 (204)
90 3ggd_A SAM-dependent methyltra 99.5 9E-15 3.1E-19 128.4 5.4 98 137-237 56-165 (245)
91 1x19_A CRTF-related protein; m 99.5 4.8E-14 1.7E-18 131.3 10.4 146 137-296 190-359 (359)
92 3mcz_A O-methyltransferase; ad 99.5 3.1E-14 1E-18 132.0 8.9 149 138-299 180-352 (352)
93 3q87_B N6 adenine specific DNA 99.5 9.3E-14 3.2E-18 116.0 11.0 133 137-296 23-164 (170)
94 1qzz_A RDMB, aclacinomycin-10- 99.5 2.7E-14 9.3E-19 133.3 8.3 153 137-297 182-357 (374)
95 1l3i_A Precorrin-6Y methyltran 99.5 1.1E-14 3.7E-19 122.1 4.8 136 137-297 33-188 (192)
96 3htx_A HEN1; HEN1, small RNA m 99.5 3.8E-14 1.3E-18 142.9 9.5 100 137-240 721-839 (950)
97 3dp7_A SAM-dependent methyltra 99.5 6E-14 2E-18 131.1 10.2 151 136-297 178-356 (363)
98 1p91_A Ribosomal RNA large sub 99.5 1.1E-14 3.6E-19 129.8 4.8 99 136-244 84-187 (269)
99 1nt2_A Fibrillarin-like PRE-rR 99.5 6.4E-14 2.2E-18 121.3 9.6 139 137-295 57-209 (210)
100 3bxo_A N,N-dimethyltransferase 99.5 6.8E-15 2.3E-19 128.2 3.4 98 136-237 39-143 (239)
101 1dus_A MJ0882; hypothetical pr 99.5 3.7E-14 1.3E-18 118.9 7.6 138 130-295 44-193 (194)
102 3reo_A (ISO)eugenol O-methyltr 99.5 2.3E-13 7.9E-18 127.5 13.7 145 138-296 204-367 (368)
103 1tw3_A COMT, carminomycin 4-O- 99.5 4.9E-14 1.7E-18 131.0 8.8 154 137-298 183-358 (360)
104 3gwz_A MMCR; methyltransferase 99.5 1.5E-13 5.2E-18 128.6 11.7 147 137-295 202-368 (369)
105 1fp1_D Isoliquiritigenin 2'-O- 99.5 3.1E-13 1E-17 126.6 13.0 145 138-295 210-372 (372)
106 2ip2_A Probable phenazine-spec 99.5 4.2E-14 1.5E-18 130.1 6.8 145 139-296 169-334 (334)
107 2ipx_A RRNA 2'-O-methyltransfe 99.5 4.3E-14 1.5E-18 123.6 6.2 141 138-296 78-232 (233)
108 1yb2_A Hypothetical protein TA 99.5 1.9E-14 6.4E-19 129.4 3.6 136 137-298 110-270 (275)
109 3p9c_A Caffeic acid O-methyltr 99.5 6.7E-13 2.3E-17 124.1 14.3 144 138-295 202-364 (364)
110 3njr_A Precorrin-6Y methylase; 99.5 6.8E-14 2.3E-18 120.4 6.9 134 137-295 55-204 (204)
111 3grz_A L11 mtase, ribosomal pr 99.5 3.9E-14 1.3E-18 121.1 5.1 130 136-297 59-197 (205)
112 1fp2_A Isoflavone O-methyltran 99.4 2.8E-13 9.7E-18 125.8 11.1 91 138-235 189-288 (352)
113 3bkx_A SAM-dependent methyltra 99.4 2E-14 6.8E-19 128.2 3.0 100 136-236 42-160 (275)
114 3lpm_A Putative methyltransfer 99.4 1.2E-13 3.9E-18 123.0 7.8 150 127-297 36-220 (259)
115 3iv6_A Putative Zn-dependent a 99.4 3.3E-14 1.1E-18 127.4 4.2 97 137-237 45-150 (261)
116 3sso_A Methyltransferase; macr 99.4 8.4E-15 2.9E-19 137.8 0.1 102 131-237 210-326 (419)
117 3p2e_A 16S rRNA methylase; met 99.4 4.9E-14 1.7E-18 123.4 4.8 104 128-234 15-138 (225)
118 1yzh_A TRNA (guanine-N(7)-)-me 99.4 1.8E-13 6.1E-18 118.1 8.3 102 134-238 38-159 (214)
119 3hm2_A Precorrin-6Y C5,15-meth 99.4 1.1E-13 3.8E-18 115.0 6.3 102 130-238 17-130 (178)
120 3dxy_A TRNA (guanine-N(7)-)-me 99.4 2.7E-14 9.1E-19 124.5 2.6 107 135-244 32-159 (218)
121 2pwy_A TRNA (adenine-N(1)-)-me 99.4 8.1E-14 2.8E-18 122.9 5.6 137 137-298 96-257 (258)
122 3eey_A Putative rRNA methylase 99.4 9.5E-14 3.2E-18 117.8 5.7 99 135-236 20-140 (197)
123 3fpf_A Mtnas, putative unchara 99.4 7.3E-14 2.5E-18 126.9 5.2 93 136-236 121-223 (298)
124 2fca_A TRNA (guanine-N(7)-)-me 99.4 1.2E-13 4E-18 119.7 5.5 101 136-239 37-157 (213)
125 3p9n_A Possible methyltransfer 99.4 4.7E-14 1.6E-18 119.3 2.9 99 137-238 44-156 (189)
126 3lst_A CALO1 methyltransferase 99.4 6.9E-13 2.4E-17 123.0 11.0 144 138-295 185-347 (348)
127 3ckk_A TRNA (guanine-N(7)-)-me 99.4 2.2E-13 7.4E-18 120.1 7.2 102 138-242 47-175 (235)
128 3evz_A Methyltransferase; NYSG 99.4 4.8E-13 1.6E-17 116.2 9.3 101 134-237 52-181 (230)
129 2yxd_A Probable cobalt-precorr 99.4 1.5E-13 5.1E-18 114.3 5.8 93 137-239 35-135 (183)
130 3dmg_A Probable ribosomal RNA 99.4 2.3E-13 7.7E-18 128.3 7.5 103 138-243 234-348 (381)
131 1ej0_A FTSJ; methyltransferase 99.4 2.3E-13 8E-18 112.0 6.2 96 137-238 22-139 (180)
132 3mb5_A SAM-dependent methyltra 99.4 2E-13 6.8E-18 120.6 6.1 135 137-297 93-254 (255)
133 3g89_A Ribosomal RNA small sub 99.4 1.9E-13 6.6E-18 121.4 4.8 137 138-297 81-230 (249)
134 3opn_A Putative hemolysin; str 99.4 2.6E-14 8.9E-19 125.8 -1.0 154 139-297 39-203 (232)
135 3id6_C Fibrillarin-like rRNA/T 99.4 1.2E-12 4.1E-17 115.2 9.6 157 123-296 58-231 (232)
136 4a6d_A Hydroxyindole O-methylt 99.4 1.2E-12 4.2E-17 121.9 9.7 147 137-296 179-346 (353)
137 1i9g_A Hypothetical protein RV 99.4 3.2E-13 1.1E-17 120.8 5.3 137 137-297 99-262 (280)
138 2b3t_A Protein methyltransfera 99.4 1.6E-12 5.4E-17 116.7 9.4 132 137-295 109-275 (276)
139 1zg3_A Isoflavanone 4'-O-methy 99.4 1.5E-12 5E-17 121.3 9.5 91 137-234 193-292 (358)
140 3lbf_A Protein-L-isoaspartate 99.4 2.3E-13 7.8E-18 116.6 3.7 92 137-237 77-176 (210)
141 1jsx_A Glucose-inhibited divis 99.4 7.4E-13 2.5E-17 113.0 6.5 91 138-236 66-166 (207)
142 3bwc_A Spermidine synthase; SA 99.4 5.9E-13 2E-17 121.6 6.2 144 137-296 95-258 (304)
143 2plw_A Ribosomal RNA methyltra 99.3 1.4E-12 4.7E-17 110.8 7.2 94 138-237 23-156 (201)
144 4dzr_A Protein-(glutamine-N5) 99.3 2.6E-13 9E-18 115.7 2.6 103 130-236 21-166 (215)
145 2ozv_A Hypothetical protein AT 99.3 2E-12 7E-17 115.3 8.4 149 127-297 24-213 (260)
146 3uwp_A Histone-lysine N-methyl 99.3 4.5E-13 1.5E-17 126.5 3.5 95 136-234 172-287 (438)
147 2nxc_A L11 mtase, ribosomal pr 99.3 7.8E-13 2.7E-17 117.6 4.8 129 136-295 119-254 (254)
148 2fyt_A Protein arginine N-meth 99.3 3.2E-12 1.1E-16 118.6 9.1 91 138-232 65-168 (340)
149 3hp7_A Hemolysin, putative; st 99.3 6.3E-13 2.2E-17 120.6 4.2 91 139-235 87-185 (291)
150 2ift_A Putative methylase HI07 99.3 5.6E-13 1.9E-17 114.3 3.1 98 138-239 54-167 (201)
151 1vbf_A 231AA long hypothetical 99.3 6.8E-13 2.3E-17 115.3 3.7 93 137-238 70-168 (231)
152 2pjd_A Ribosomal RNA small sub 99.3 1.2E-12 4.2E-17 121.3 5.6 104 130-238 188-306 (343)
153 2b25_A Hypothetical protein; s 99.3 8E-13 2.7E-17 122.0 4.0 99 137-243 105-227 (336)
154 1g8a_A Fibrillarin-like PRE-rR 99.3 8.1E-12 2.8E-16 108.4 10.1 139 138-296 74-227 (227)
155 3q7e_A Protein arginine N-meth 99.3 9.8E-13 3.3E-17 122.4 3.9 94 137-234 66-172 (349)
156 1o54_A SAM-dependent O-methylt 99.3 2.1E-12 7.1E-17 115.9 5.2 136 137-298 112-272 (277)
157 1ws6_A Methyltransferase; stru 99.3 2.6E-13 8.9E-18 111.9 -0.7 98 137-239 41-151 (171)
158 3gdh_A Trimethylguanosine synt 99.3 7.1E-14 2.4E-18 122.4 -4.7 94 137-234 78-180 (241)
159 2fhp_A Methylase, putative; al 99.3 1.3E-12 4.4E-17 109.4 2.6 99 137-239 44-158 (187)
160 2fpo_A Methylase YHHF; structu 99.3 2.2E-12 7.6E-17 110.6 3.8 97 138-238 55-163 (202)
161 3fzg_A 16S rRNA methylase; met 99.3 5.4E-13 1.8E-17 113.5 -0.2 96 136-236 48-152 (200)
162 2yvl_A TRMI protein, hypotheti 99.2 6.9E-13 2.4E-17 116.2 0.4 98 137-242 91-197 (248)
163 4dcm_A Ribosomal RNA large sub 99.2 4.7E-12 1.6E-16 119.0 6.0 97 139-239 224-338 (375)
164 3u81_A Catechol O-methyltransf 99.2 2.1E-12 7.2E-17 112.0 3.4 97 137-236 58-171 (221)
165 2yxe_A Protein-L-isoaspartate 99.2 2E-12 7E-17 111.0 2.6 93 137-238 77-180 (215)
166 3ntv_A MW1564 protein; rossman 99.2 3.6E-12 1.2E-16 111.5 3.7 93 137-234 71-175 (232)
167 2bm8_A Cephalosporin hydroxyla 99.2 3.4E-12 1.2E-16 112.4 3.2 93 138-236 82-188 (236)
168 2esr_A Methyltransferase; stru 99.2 1.4E-12 4.8E-17 108.7 0.7 99 137-239 31-142 (177)
169 1g6q_1 HnRNP arginine N-methyl 99.2 8.7E-12 3E-16 115.0 5.9 93 137-233 38-143 (328)
170 3r0q_C Probable protein argini 99.2 2.7E-12 9.1E-17 120.6 2.1 92 138-234 64-168 (376)
171 2vdv_E TRNA (guanine-N(7)-)-me 99.2 1.1E-11 3.8E-16 109.3 5.9 100 138-240 50-178 (246)
172 1o9g_A RRNA methyltransferase; 99.2 3.3E-12 1.1E-16 112.8 2.1 94 138-234 52-213 (250)
173 4azs_A Methyltransferase WBDD; 99.2 9.3E-13 3.2E-17 130.2 -1.9 97 137-236 66-175 (569)
174 1dl5_A Protein-L-isoaspartate 99.2 2.8E-12 9.6E-17 117.6 1.4 92 137-237 75-177 (317)
175 2oxt_A Nucleoside-2'-O-methylt 99.2 1.1E-11 3.8E-16 111.2 4.7 93 137-237 74-187 (265)
176 3dou_A Ribosomal RNA large sub 99.2 5.6E-11 1.9E-15 101.3 8.3 94 137-236 25-140 (191)
177 3tfw_A Putative O-methyltransf 99.2 1.2E-11 3.9E-16 109.5 4.2 93 137-235 63-170 (248)
178 1jg1_A PIMT;, protein-L-isoasp 99.2 8.1E-12 2.8E-16 109.2 2.8 99 130-239 83-193 (235)
179 3c3p_A Methyltransferase; NP_9 99.2 1.2E-11 4.2E-16 106.0 3.6 92 137-235 56-160 (210)
180 1i1n_A Protein-L-isoaspartate 99.2 1.1E-11 3.7E-16 107.4 3.1 92 137-237 77-184 (226)
181 2nyu_A Putative ribosomal RNA 99.1 2.6E-11 8.9E-16 102.3 5.3 96 137-238 22-148 (196)
182 2pbf_A Protein-L-isoaspartate 99.1 7.6E-12 2.6E-16 108.5 2.0 100 129-237 69-195 (227)
183 2frn_A Hypothetical protein PH 99.1 1.3E-11 4.4E-16 111.2 3.5 93 136-236 124-226 (278)
184 3adn_A Spermidine synthase; am 99.1 2.9E-11 9.8E-16 110.0 5.7 98 137-236 83-199 (294)
185 1r18_A Protein-L-isoaspartate( 99.1 1.4E-11 4.9E-16 107.0 3.1 100 128-237 72-196 (227)
186 3bzb_A Uncharacterized protein 99.1 4E-11 1.4E-15 108.0 6.1 100 138-237 80-207 (281)
187 1u2z_A Histone-lysine N-methyl 99.1 2.6E-11 8.9E-16 115.7 4.9 94 137-234 242-358 (433)
188 1ixk_A Methyltransferase; open 99.1 4.7E-11 1.6E-15 109.5 6.4 98 137-237 118-248 (315)
189 2y1w_A Histone-arginine methyl 99.1 1.6E-11 5.5E-16 114.1 3.2 95 137-236 50-156 (348)
190 2wa2_A Non-structural protein 99.1 1E-11 3.5E-16 112.0 1.7 92 138-237 83-195 (276)
191 3tma_A Methyltransferase; thum 99.1 1.8E-11 6.1E-16 113.8 3.3 99 137-238 203-320 (354)
192 2gpy_A O-methyltransferase; st 99.1 1.2E-11 4.1E-16 107.8 1.5 93 137-235 54-160 (233)
193 1sqg_A SUN protein, FMU protei 99.1 1.3E-10 4.3E-15 111.0 8.3 98 137-237 246-376 (429)
194 2yxl_A PH0851 protein, 450AA l 99.1 6.2E-11 2.1E-15 113.9 6.1 98 137-237 259-391 (450)
195 3tr6_A O-methyltransferase; ce 99.1 1.3E-11 4.4E-16 106.7 1.1 94 137-236 64-175 (225)
196 3dr5_A Putative O-methyltransf 99.1 2E-11 7E-16 106.3 1.9 89 140-234 59-162 (221)
197 3duw_A OMT, O-methyltransferas 99.1 3.4E-11 1.1E-15 104.1 3.0 94 137-236 58-168 (223)
198 3r3h_A O-methyltransferase, SA 99.1 7.9E-12 2.7E-16 110.4 -1.4 93 137-235 60-170 (242)
199 1iy9_A Spermidine synthase; ro 99.1 3.5E-10 1.2E-14 101.8 8.7 98 137-237 75-191 (275)
200 2pt6_A Spermidine synthase; tr 99.1 3.2E-10 1.1E-14 104.3 8.5 99 137-238 116-233 (321)
201 3ajd_A Putative methyltransfer 99.0 1.3E-10 4.3E-15 104.4 5.1 98 137-237 83-213 (274)
202 1xj5_A Spermidine synthase 1; 99.0 1.9E-10 6.5E-15 106.4 6.3 98 137-237 120-237 (334)
203 3cbg_A O-methyltransferase; cy 99.0 8E-11 2.7E-15 102.9 3.4 97 137-236 72-183 (232)
204 2p41_A Type II methyltransfera 99.0 8.8E-11 3E-15 107.3 3.5 95 138-238 83-194 (305)
205 1nv8_A HEMK protein; class I a 99.0 9.1E-11 3.1E-15 106.1 3.5 94 137-237 123-251 (284)
206 1sui_A Caffeoyl-COA O-methyltr 99.0 3.2E-11 1.1E-15 106.8 0.3 92 138-235 80-190 (247)
207 2igt_A SAM dependent methyltra 99.0 1.6E-11 5.4E-16 113.6 -1.9 97 138-237 154-274 (332)
208 3gjy_A Spermidine synthase; AP 99.0 8E-11 2.7E-15 108.0 2.7 95 139-236 91-201 (317)
209 3b3j_A Histone-arginine methyl 99.0 7.9E-11 2.7E-15 114.1 2.8 93 138-235 159-263 (480)
210 1mjf_A Spermidine synthase; sp 99.0 3.5E-10 1.2E-14 102.0 6.8 95 137-236 75-194 (281)
211 1uir_A Polyamine aminopropyltr 99.0 1.5E-10 5E-15 106.2 4.2 97 137-236 77-196 (314)
212 2cmg_A Spermidine synthase; tr 99.0 3.4E-10 1.2E-14 101.2 6.3 88 137-237 72-173 (262)
213 1inl_A Spermidine synthase; be 99.0 2.6E-10 8.8E-15 103.7 5.4 98 137-237 90-207 (296)
214 1ne2_A Hypothetical protein TA 99.0 2.6E-10 8.8E-15 96.9 5.1 83 137-225 51-139 (200)
215 2i7c_A Spermidine synthase; tr 99.0 1.7E-10 6E-15 104.1 4.2 98 137-237 78-194 (283)
216 2xyq_A Putative 2'-O-methyl tr 99.0 2.5E-10 8.7E-15 103.5 5.0 90 138-236 64-172 (290)
217 4hc4_A Protein arginine N-meth 99.0 1.8E-10 6.2E-15 108.1 3.8 92 138-234 84-188 (376)
218 3a27_A TYW2, uncharacterized p 99.0 1.2E-10 4.1E-15 104.5 2.5 93 137-237 119-221 (272)
219 2o07_A Spermidine synthase; st 99.0 2E-10 6.7E-15 104.9 3.9 98 137-237 95-211 (304)
220 3tm4_A TRNA (guanine N2-)-meth 99.0 2.8E-10 9.5E-15 106.7 4.7 96 136-236 216-330 (373)
221 2b2c_A Spermidine synthase; be 99.0 2.2E-10 7.5E-15 105.1 3.8 98 137-237 108-224 (314)
222 2hnk_A SAM-dependent O-methylt 99.0 1.1E-10 3.8E-15 102.2 1.5 93 137-235 60-181 (239)
223 3m6w_A RRNA methylase; rRNA me 98.9 3.6E-10 1.2E-14 108.8 4.3 98 137-237 101-231 (464)
224 2h00_A Methyltransferase 10 do 98.9 7.8E-11 2.7E-15 104.0 -0.5 135 138-279 66-239 (254)
225 2avd_A Catechol-O-methyltransf 98.9 2.5E-10 8.6E-15 98.8 2.5 93 137-235 69-179 (229)
226 2frx_A Hypothetical protein YE 98.9 2.6E-09 9E-14 103.3 9.3 98 137-237 117-248 (479)
227 3c3y_A Pfomt, O-methyltransfer 98.9 1.5E-10 5.1E-15 101.7 0.4 93 137-235 70-181 (237)
228 2qm3_A Predicted methyltransfe 98.9 8.3E-10 2.8E-14 103.4 5.0 95 138-237 173-280 (373)
229 3lec_A NADB-rossmann superfami 98.9 1.1E-09 3.8E-14 96.0 4.7 120 136-279 20-150 (230)
230 1yub_A Ermam, rRNA methyltrans 98.8 2.1E-11 7.3E-16 107.6 -7.6 101 130-234 21-144 (245)
231 1zq9_A Probable dimethyladenos 98.8 3.2E-10 1.1E-14 102.5 -0.1 90 137-231 28-143 (285)
232 1wy7_A Hypothetical protein PH 98.8 4.3E-09 1.5E-13 89.5 6.5 90 138-235 50-149 (207)
233 3lcv_B Sisomicin-gentamicin re 98.8 2.8E-09 9.5E-14 94.7 5.2 94 138-237 133-237 (281)
234 4dmg_A Putative uncharacterize 98.8 8E-10 2.7E-14 104.4 1.7 99 136-237 213-328 (393)
235 3frh_A 16S rRNA methylase; met 98.8 1.5E-09 5.1E-14 95.5 3.2 95 137-237 105-207 (253)
236 2f8l_A Hypothetical protein LM 98.8 1.3E-09 4.4E-14 100.9 2.9 97 138-238 131-259 (344)
237 2b78_A Hypothetical protein SM 98.8 8.7E-10 3E-14 103.8 1.0 99 137-238 212-334 (385)
238 2as0_A Hypothetical protein PH 98.8 5.9E-10 2E-14 105.1 -0.2 99 137-238 217-338 (396)
239 3v97_A Ribosomal RNA large sub 98.8 6.7E-10 2.3E-14 112.2 -0.1 97 138-237 540-659 (703)
240 3m4x_A NOL1/NOP2/SUN family pr 98.8 2.4E-09 8.1E-14 102.9 2.8 98 137-237 105-236 (456)
241 1wxx_A TT1595, hypothetical pr 98.7 4.9E-10 1.7E-14 105.3 -2.4 97 138-237 210-327 (382)
242 3gnl_A Uncharacterized protein 98.7 2.1E-09 7.3E-14 94.9 1.8 95 135-234 19-124 (244)
243 2yx1_A Hypothetical protein MJ 98.7 6.8E-09 2.3E-13 95.9 4.5 88 137-235 195-291 (336)
244 3kr9_A SAM-dependent methyltra 98.7 3.7E-09 1.3E-13 92.3 2.4 120 136-279 14-144 (225)
245 3c0k_A UPF0064 protein YCCW; P 98.7 4.1E-09 1.4E-13 99.4 2.9 98 137-237 220-341 (396)
246 2ih2_A Modification methylase 98.7 8.3E-09 2.8E-13 97.4 3.7 95 138-237 40-166 (421)
247 2h1r_A Dimethyladenosine trans 98.7 1E-08 3.5E-13 93.2 4.0 88 137-229 42-153 (299)
248 2jjq_A Uncharacterized RNA met 98.6 2E-08 6.9E-13 95.7 5.3 93 136-236 289-388 (425)
249 1uwv_A 23S rRNA (uracil-5-)-me 98.6 4.3E-08 1.5E-12 93.6 6.1 104 128-235 276-389 (433)
250 3k6r_A Putative transferase PH 98.6 2.2E-08 7.4E-13 90.2 3.6 93 134-234 122-224 (278)
251 3b5i_A S-adenosyl-L-methionine 98.5 8.8E-08 3E-12 89.7 5.4 100 139-238 54-228 (374)
252 2okc_A Type I restriction enzy 98.5 7.5E-08 2.6E-12 92.1 4.6 96 138-237 172-309 (445)
253 3bt7_A TRNA (uracil-5-)-methyl 98.5 2.1E-08 7.3E-13 93.7 0.4 101 129-238 205-329 (369)
254 3k0b_A Predicted N6-adenine-sp 98.5 3.9E-08 1.3E-12 92.8 2.2 76 160-239 264-354 (393)
255 1m6e_X S-adenosyl-L-methionnin 98.4 4.7E-07 1.6E-11 84.2 8.7 99 139-237 53-211 (359)
256 3ldg_A Putative uncharacterize 98.4 6.8E-08 2.3E-12 90.9 2.7 77 160-240 257-348 (384)
257 2efj_A 3,7-dimethylxanthine me 98.4 2.9E-07 9.9E-12 86.4 6.9 100 139-238 54-228 (384)
258 1qam_A ERMC' methyltransferase 98.4 7.5E-09 2.6E-13 91.3 -3.8 64 138-205 31-101 (244)
259 3ldu_A Putative methylase; str 98.4 9E-08 3.1E-12 90.1 1.9 76 160-239 258-348 (385)
260 3gru_A Dimethyladenosine trans 98.4 5.9E-08 2E-12 88.1 0.3 69 137-208 50-124 (295)
261 3evf_A RNA-directed RNA polyme 98.3 8.8E-07 3E-11 79.0 7.3 98 137-237 74-186 (277)
262 2qfm_A Spermine synthase; sper 98.3 1.7E-07 5.9E-12 87.1 2.4 96 138-236 189-315 (364)
263 2b9e_A NOL1/NOP2/SUN domain fa 98.2 1.6E-06 5.5E-11 79.1 6.9 97 137-237 102-236 (309)
264 3tqs_A Ribosomal RNA small sub 98.2 5.3E-07 1.8E-11 80.1 3.4 65 137-205 29-103 (255)
265 2dul_A N(2),N(2)-dimethylguano 98.1 6.7E-07 2.3E-11 83.9 2.0 92 138-236 48-165 (378)
266 2r6z_A UPF0341 protein in RSP 98.1 5.1E-07 1.7E-11 80.3 0.8 70 138-210 84-173 (258)
267 3v97_A Ribosomal RNA large sub 98.1 7.2E-07 2.5E-11 90.1 1.8 77 160-239 257-351 (703)
268 3fut_A Dimethyladenosine trans 98.1 9.7E-07 3.3E-11 79.1 1.7 64 140-206 49-118 (271)
269 2ar0_A M.ecoki, type I restric 98.0 2E-06 6.7E-11 84.4 2.2 97 138-237 170-314 (541)
270 3lkd_A Type I restriction-modi 98.0 1.4E-05 4.7E-10 78.3 7.9 99 137-238 221-361 (542)
271 3o4f_A Spermidine synthase; am 97.9 1.2E-05 4E-10 72.8 6.7 100 136-237 82-200 (294)
272 3axs_A Probable N(2),N(2)-dime 97.9 1.5E-06 5.2E-11 81.8 0.8 93 138-237 53-160 (392)
273 3khk_A Type I restriction-modi 97.9 1.6E-05 5.3E-10 78.0 6.5 98 139-238 246-398 (544)
274 3ftd_A Dimethyladenosine trans 97.8 1.9E-05 6.4E-10 69.7 5.9 57 137-196 31-92 (249)
275 3ll7_A Putative methyltransfer 97.8 2.3E-06 7.7E-11 81.0 -0.1 102 138-242 94-216 (410)
276 3gcz_A Polyprotein; flavivirus 97.8 1.6E-05 5.4E-10 71.0 5.2 96 138-237 91-203 (282)
277 3cvo_A Methyltransferase-like 97.8 4E-05 1.4E-09 65.6 7.3 93 136-234 29-153 (202)
278 3uzu_A Ribosomal RNA small sub 97.8 3.6E-06 1.2E-10 75.7 0.2 57 137-196 42-106 (279)
279 1m6y_A S-adenosyl-methyltransf 97.8 3.8E-06 1.3E-10 76.3 0.1 76 128-206 16-106 (301)
280 1qyr_A KSGA, high level kasuga 97.7 5.5E-06 1.9E-10 73.4 0.3 65 137-206 21-98 (252)
281 2oyr_A UPF0341 protein YHIQ; a 97.6 4.8E-06 1.6E-10 74.0 -1.3 87 139-229 90-194 (258)
282 3s1s_A Restriction endonucleas 97.6 0.00018 6.1E-09 73.0 9.9 98 138-238 322-468 (878)
283 4gqb_A Protein arginine N-meth 97.6 2.9E-05 9.8E-10 77.2 4.0 87 140-231 360-463 (637)
284 4fzv_A Putative methyltransfer 97.6 4E-05 1.4E-09 71.3 4.6 99 136-237 147-286 (359)
285 3eld_A Methyltransferase; flav 97.5 0.00041 1.4E-08 62.3 8.9 98 136-237 80-193 (300)
286 2qy6_A UPF0209 protein YFCK; s 97.3 5.8E-05 2E-09 67.0 1.7 93 139-233 62-211 (257)
287 3ua3_A Protein arginine N-meth 97.3 2.2E-05 7.5E-10 78.4 -1.5 90 140-232 412-531 (745)
288 4auk_A Ribosomal RNA large sub 97.3 0.0021 7.3E-08 59.6 11.7 85 136-228 210-296 (375)
289 2k4m_A TR8_protein, UPF0146 pr 97.1 5.3E-05 1.8E-09 61.3 -0.5 80 139-234 37-120 (153)
290 2vz8_A Fatty acid synthase; tr 96.8 0.00059 2E-08 77.6 4.2 94 139-235 1242-1348(2512)
291 3c6k_A Spermine synthase; sper 96.7 0.0013 4.6E-08 61.2 5.2 95 138-235 206-331 (381)
292 3lkz_A Non-structural protein 96.5 0.0047 1.6E-07 55.4 6.5 96 137-238 94-207 (321)
293 2wk1_A NOVP; transferase, O-me 96.5 0.0014 4.7E-08 58.8 3.2 95 137-235 106-244 (282)
294 2zig_A TTHA0409, putative modi 96.4 0.00046 1.6E-08 62.2 -0.1 51 128-178 226-276 (297)
295 3r24_A NSP16, 2'-O-methyl tran 96.2 0.0037 1.3E-07 56.1 4.3 90 138-235 110-217 (344)
296 3ufb_A Type I restriction-modi 96.1 0.0087 3E-07 58.3 6.7 98 137-237 217-364 (530)
297 2px2_A Genome polyprotein [con 96.0 0.0095 3.3E-07 52.4 5.7 97 135-237 71-185 (269)
298 1wg8_A Predicted S-adenosylmet 95.7 0.004 1.4E-07 55.7 2.3 74 127-205 11-96 (285)
299 3p8z_A Mtase, non-structural p 95.1 0.035 1.2E-06 48.3 6.0 96 137-239 78-190 (267)
300 1g60_A Adenine-specific methyl 94.3 0.0083 2.8E-07 52.7 0.1 51 128-178 203-253 (260)
301 2uyo_A Hypothetical protein ML 94.2 0.17 5.8E-06 45.7 8.7 100 136-238 101-221 (310)
302 2zig_A TTHA0409, putative modi 93.2 0.03 1E-06 50.1 1.9 56 179-237 22-99 (297)
303 1pqw_A Polyketide synthase; ro 91.9 0.075 2.6E-06 44.0 2.6 87 138-233 39-135 (198)
304 3tka_A Ribosomal RNA small sub 90.8 0.17 5.8E-06 46.3 3.8 77 126-205 45-135 (347)
305 1rjd_A PPM1P, carboxy methyl t 89.6 0.35 1.2E-05 44.1 4.9 98 137-237 97-235 (334)
306 3tos_A CALS11; methyltransfera 89.6 0.17 5.7E-06 44.6 2.6 102 131-236 63-218 (257)
307 1boo_A Protein (N-4 cytosine-s 88.1 0.28 9.7E-06 44.3 3.2 57 179-237 15-86 (323)
308 1boo_A Protein (N-4 cytosine-s 88.0 0.13 4.4E-06 46.6 0.8 51 128-178 243-293 (323)
309 3vyw_A MNMC2; tRNA wobble urid 87.6 0.12 4E-06 46.8 0.3 51 179-232 168-223 (308)
310 1v3u_A Leukotriene B4 12- hydr 87.1 0.22 7.4E-06 44.8 1.8 88 138-233 146-242 (333)
311 2dph_A Formaldehyde dismutase; 85.0 0.56 1.9E-05 43.3 3.5 93 137-233 185-297 (398)
312 4b7c_A Probable oxidoreductase 83.5 0.41 1.4E-05 43.0 1.8 88 137-233 149-246 (336)
313 1jvb_A NAD(H)-dependent alcoho 83.4 0.28 9.4E-06 44.4 0.6 89 137-233 170-269 (347)
314 1kol_A Formaldehyde dehydrogen 83.0 1 3.5E-05 41.4 4.3 93 138-233 186-298 (398)
315 1eg2_A Modification methylase 81.4 0.91 3.1E-05 40.9 3.3 43 195-237 55-108 (319)
316 2j3h_A NADP-dependent oxidored 81.4 0.82 2.8E-05 41.1 3.0 88 138-233 156-253 (345)
317 2dq4_A L-threonine 3-dehydroge 80.9 0.66 2.3E-05 41.8 2.2 87 138-233 165-260 (343)
318 3gms_A Putative NADPH:quinone 80.9 0.17 5.9E-06 45.7 -1.8 87 138-233 145-241 (340)
319 2hcy_A Alcohol dehydrogenase 1 80.4 0.42 1.5E-05 43.2 0.7 89 138-233 170-267 (347)
320 2km1_A Protein DRE2; yeast, an 80.4 1.2 4E-05 35.2 3.1 42 192-233 53-96 (136)
321 1eg2_A Modification methylase 80.3 0.26 8.8E-06 44.6 -0.8 52 128-179 233-287 (319)
322 3qwb_A Probable quinone oxidor 80.0 0.78 2.7E-05 41.1 2.3 88 138-233 149-245 (334)
323 1ej6_A Lambda2; icosahedral, n 79.8 2.7 9.1E-05 43.8 6.2 96 137-236 821-927 (1289)
324 1yb5_A Quinone oxidoreductase; 79.1 0.54 1.8E-05 42.7 1.0 87 138-233 171-267 (351)
325 3nx4_A Putative oxidoreductase 79.1 1.3 4.3E-05 39.4 3.4 86 140-233 149-239 (324)
326 1f8f_A Benzyl alcohol dehydrog 78.3 0.91 3.1E-05 41.4 2.2 87 138-233 191-287 (371)
327 2hwk_A Helicase NSP2; rossman 78.2 4.6 0.00016 35.9 6.6 40 196-235 204-254 (320)
328 2eih_A Alcohol dehydrogenase; 78.0 0.71 2.4E-05 41.6 1.4 87 138-233 167-263 (343)
329 1rjw_A ADH-HT, alcohol dehydro 76.8 1.3 4.3E-05 39.9 2.7 86 137-233 164-259 (339)
330 3s2e_A Zinc-containing alcohol 76.8 0.9 3.1E-05 40.8 1.7 89 137-234 166-262 (340)
331 2c0c_A Zinc binding alcohol de 76.7 1.3 4.4E-05 40.3 2.7 88 137-233 163-259 (362)
332 2b5w_A Glucose dehydrogenase; 76.4 2.5 8.5E-05 38.2 4.6 83 139-233 174-271 (357)
333 1g60_A Adenine-specific methyl 76.2 1.1 3.8E-05 38.9 2.1 22 214-235 53-74 (260)
334 1wly_A CAAR, 2-haloacrylate re 74.8 0.92 3.1E-05 40.6 1.2 87 138-233 146-242 (333)
335 2j8z_A Quinone oxidoreductase; 74.5 1.8 6.1E-05 39.1 3.1 87 138-233 163-259 (354)
336 2zb4_A Prostaglandin reductase 74.1 1 3.5E-05 40.7 1.3 86 139-233 162-258 (357)
337 3g7u_A Cytosine-specific methy 73.2 1.3 4.6E-05 40.8 1.9 64 139-205 3-78 (376)
338 1qor_A Quinone oxidoreductase; 73.1 0.91 3.1E-05 40.5 0.7 87 138-233 141-237 (327)
339 2oo3_A Protein involved in cat 72.8 1.8 6.2E-05 38.4 2.6 96 139-236 93-199 (283)
340 4ej6_A Putative zinc-binding d 72.5 2.1 7.3E-05 39.0 3.1 89 137-234 182-283 (370)
341 3jyn_A Quinone oxidoreductase; 72.3 0.77 2.6E-05 41.0 0.0 88 138-234 141-238 (325)
342 4dup_A Quinone oxidoreductase; 72.0 0.82 2.8E-05 41.4 0.2 87 138-233 168-263 (353)
343 3iyl_W VP1; non-enveloped viru 71.7 6.4 0.00022 41.3 6.6 95 139-236 829-934 (1299)
344 2d8a_A PH0655, probable L-thre 71.4 1.9 6.3E-05 38.9 2.4 87 138-233 168-265 (348)
345 1e3j_A NADP(H)-dependent ketos 71.3 2.6 9E-05 37.9 3.4 89 137-233 168-269 (352)
346 3two_A Mannitol dehydrogenase; 70.1 1.1 3.8E-05 40.4 0.6 85 137-234 176-264 (348)
347 1xa0_A Putative NADPH dependen 68.7 1.8 6.1E-05 38.5 1.6 86 140-233 152-244 (328)
348 4eye_A Probable oxidoreductase 67.6 0.79 2.7E-05 41.3 -1.0 86 138-233 160-255 (342)
349 3qv2_A 5-cytosine DNA methyltr 67.5 1.1 3.8E-05 40.6 -0.0 93 138-234 10-129 (327)
350 1g55_A DNA cytosine methyltran 67.3 0.37 1.3E-05 44.0 -3.3 64 139-205 3-75 (343)
351 1iz0_A Quinone oxidoreductase; 65.9 0.64 2.2E-05 41.1 -2.0 85 137-233 125-216 (302)
352 3fpc_A NADP-dependent alcohol 65.3 1.5 5.1E-05 39.6 0.4 88 137-233 166-264 (352)
353 1pl8_A Human sorbitol dehydrog 64.4 5.6 0.00019 35.8 4.1 89 137-233 171-271 (356)
354 3krt_A Crotonyl COA reductase; 62.2 5.1 0.00018 37.5 3.5 87 138-233 229-342 (456)
355 3iei_A Leucine carboxyl methyl 61.6 60 0.0021 29.1 10.4 140 138-278 91-281 (334)
356 3jv7_A ADH-A; dehydrogenase, n 61.4 2 6.9E-05 38.5 0.5 88 137-234 171-269 (345)
357 3goh_A Alcohol dehydrogenase, 60.0 0.76 2.6E-05 40.8 -2.6 82 138-234 143-228 (315)
358 1uuf_A YAHK, zinc-type alcohol 59.6 1.4 4.8E-05 40.2 -0.9 86 137-233 194-286 (369)
359 1cdo_A Alcohol dehydrogenase; 58.6 4.2 0.00014 36.9 2.1 88 138-233 193-292 (374)
360 3fbg_A Putative arginate lyase 58.3 4.3 0.00015 36.4 2.1 87 138-233 151-246 (346)
361 4a0s_A Octenoyl-COA reductase/ 57.1 4.3 0.00015 37.8 2.0 89 138-233 221-334 (447)
362 1i4w_A Mitochondrial replicati 56.2 2.2 7.6E-05 39.1 -0.2 48 139-186 60-114 (353)
363 3fwz_A Inner membrane protein 55.2 8.2 0.00028 29.6 3.1 98 139-239 8-109 (140)
364 4dvj_A Putative zinc-dependent 55.1 26 0.00089 31.5 6.9 87 139-234 173-269 (363)
365 1tt7_A YHFP; alcohol dehydroge 55.1 1.4 4.9E-05 39.2 -1.6 86 140-233 153-245 (330)
366 2jhf_A Alcohol dehydrogenase E 54.0 5.2 0.00018 36.2 2.0 88 138-233 192-291 (374)
367 3c85_A Putative glutathione-re 53.9 5.3 0.00018 32.0 1.8 97 139-238 40-142 (183)
368 1e3i_A Alcohol dehydrogenase, 52.6 5.5 0.00019 36.1 1.9 88 138-233 196-295 (376)
369 3m6i_A L-arabinitol 4-dehydrog 52.4 7.7 0.00026 34.9 2.8 90 137-233 179-281 (363)
370 3abi_A Putative uncharacterize 52.4 1.9 6.7E-05 39.2 -1.2 71 136-206 14-85 (365)
371 4eez_A Alcohol dehydrogenase 1 51.9 12 0.00041 33.2 4.0 91 137-234 163-262 (348)
372 1piw_A Hypothetical zinc-type 51.8 1.1 3.7E-05 40.7 -3.1 89 137-233 179-274 (360)
373 1p0f_A NADP-dependent alcohol 51.6 4.8 0.00016 36.5 1.3 88 138-233 192-291 (373)
374 3uog_A Alcohol dehydrogenase; 50.8 2.5 8.6E-05 38.3 -0.8 87 138-234 190-286 (363)
375 3llv_A Exopolyphosphatase-rela 49.7 16 0.00054 27.7 3.9 97 139-239 7-107 (141)
376 2cdc_A Glucose dehydrogenase g 48.9 5.1 0.00018 36.2 1.0 84 138-233 181-276 (366)
377 3uko_A Alcohol dehydrogenase c 48.6 7 0.00024 35.4 1.9 88 138-233 194-293 (378)
378 3trk_A Nonstructural polyprote 48.4 6.4 0.00022 34.7 1.5 42 193-234 206-258 (324)
379 1vj0_A Alcohol dehydrogenase, 48.1 5.7 0.00019 36.2 1.2 88 138-233 196-296 (380)
380 3ip1_A Alcohol dehydrogenase, 47.9 7.4 0.00025 35.7 2.0 87 139-233 215-316 (404)
381 3ps9_A TRNA 5-methylaminomethy 47.2 9.2 0.00032 37.6 2.7 92 139-233 68-217 (676)
382 3pvc_A TRNA 5-methylaminomethy 46.3 4.8 0.00016 39.9 0.4 92 139-232 60-208 (689)
383 3pi7_A NADH oxidoreductase; gr 45.8 15 0.00051 32.7 3.7 65 158-233 188-261 (349)
384 2fzw_A Alcohol dehydrogenase c 45.4 5.4 0.00019 36.0 0.6 88 138-233 191-290 (373)
385 2h6e_A ADH-4, D-arabinose 1-de 44.8 8.2 0.00028 34.4 1.7 87 138-233 171-267 (344)
386 1zkd_A DUF185; NESG, RPR58, st 44.4 7.3 0.00025 36.1 1.3 90 115-212 50-163 (387)
387 3gaz_A Alcohol dehydrogenase s 44.3 6.5 0.00022 35.2 0.9 84 138-233 151-244 (343)
388 4h0n_A DNMT2; SAH binding, tra 43.9 2.1 7.2E-05 38.8 -2.4 64 139-205 4-76 (333)
389 2c7p_A Modification methylase 43.4 3.4 0.00012 37.2 -1.1 64 139-205 12-78 (327)
390 2vn8_A Reticulon-4-interacting 42.5 6.7 0.00023 35.5 0.8 87 139-233 185-278 (375)
391 1yqd_A Sinapyl alcohol dehydro 42.5 2.9 0.0001 37.9 -1.7 89 137-233 187-280 (366)
392 2qrv_A DNA (cytosine-5)-methyl 38.5 4.4 0.00015 36.0 -1.1 64 139-205 17-90 (295)
393 4a2c_A Galactitol-1-phosphate 38.3 18 0.00061 32.0 2.9 91 137-234 160-259 (346)
394 3tqh_A Quinone oxidoreductase; 38.0 13 0.00044 32.7 1.9 87 137-234 152-244 (321)
395 2g1u_A Hypothetical protein TM 37.7 15 0.00053 28.4 2.1 98 139-239 20-122 (155)
396 3ggo_A Prephenate dehydrogenas 37.3 23 0.00078 31.4 3.4 89 139-236 34-128 (314)
397 3gqv_A Enoyl reductase; medium 36.1 17 0.00057 32.8 2.3 88 137-233 164-261 (371)
398 4gua_A Non-structural polyprot 35.5 15 0.00051 35.7 1.9 42 192-234 216-268 (670)
399 1pjc_A Protein (L-alanine dehy 35.4 1.6 5.6E-05 39.8 -4.6 91 139-233 168-265 (361)
400 3ubt_Y Modification methylase 33.0 8.8 0.0003 34.0 -0.1 91 140-234 2-109 (331)
401 1wg8_A Predicted S-adenosylmet 32.4 14 0.00047 32.7 1.0 24 213-236 211-235 (285)
402 4f3n_A Uncharacterized ACR, CO 30.9 22 0.00077 33.3 2.3 59 115-173 110-180 (432)
403 3tka_A Ribosomal RNA small sub 30.9 14 0.0005 33.5 1.0 25 213-237 252-277 (347)
404 3l9w_A Glutathione-regulated p 30.8 31 0.001 32.0 3.2 97 139-238 5-105 (413)
405 4a27_A Synaptic vesicle membra 29.9 33 0.0011 30.4 3.2 85 138-233 143-236 (349)
406 2aef_A Calcium-gated potassium 29.1 30 0.001 28.6 2.7 97 139-240 10-110 (234)
407 4dio_A NAD(P) transhydrogenase 28.8 5.7 0.0002 37.0 -2.1 93 139-232 191-309 (405)
408 1lss_A TRK system potassium up 28.4 57 0.002 23.9 4.0 96 139-238 5-105 (140)
409 3dmg_A Probable ribosomal RNA 27.6 90 0.0031 28.3 5.8 101 137-243 45-147 (381)
410 2eez_A Alanine dehydrogenase; 27.3 2.2 7.5E-05 39.0 -5.3 93 139-233 167-264 (369)
411 3e8x_A Putative NAD-dependent 27.2 33 0.0011 28.2 2.6 75 139-215 22-101 (236)
412 3c24_A Putative oxidoreductase 26.9 30 0.001 29.7 2.3 87 139-237 12-102 (286)
413 3h2s_A Putative NADH-flavin re 26.8 38 0.0013 27.3 2.9 75 158-234 23-103 (224)
414 3ew7_A LMO0794 protein; Q8Y8U8 26.5 47 0.0016 26.5 3.4 75 158-234 23-101 (221)
415 4e21_A 6-phosphogluconate dehy 26.3 11 0.00037 34.3 -0.7 91 139-237 23-116 (358)
416 2f1k_A Prephenate dehydrogenas 26.1 30 0.001 29.4 2.2 87 140-237 2-92 (279)
417 3me5_A Cytosine-specific methy 24.7 12 0.00041 35.6 -0.8 48 139-186 89-143 (482)
418 1m6y_A S-adenosyl-methyltransf 24.5 20 0.00067 31.8 0.6 24 213-236 223-247 (301)
419 2vhw_A Alanine dehydrogenase; 23.5 3 0.0001 38.3 -5.1 91 139-233 169-266 (377)
420 3p2y_A Alanine dehydrogenase/p 23.3 2.3 8E-05 39.3 -5.9 93 139-232 185-299 (381)
421 3ce6_A Adenosylhomocysteinase; 22.9 18 0.00062 34.5 0.1 82 138-233 274-359 (494)
422 2py6_A Methyltransferase FKBM; 22.2 29 0.001 32.0 1.3 37 138-174 227-267 (409)
423 2ew2_A 2-dehydropantoate 2-red 21.8 50 0.0017 28.3 2.8 93 139-237 4-109 (316)
424 2cf5_A Atccad5, CAD, cinnamyl 21.4 34 0.0012 30.5 1.6 89 137-233 180-273 (357)
425 4eso_A Putative oxidoreductase 20.9 30 0.001 29.2 1.0 96 139-234 9-137 (255)
426 3dqp_A Oxidoreductase YLBE; al 20.8 47 0.0016 26.8 2.3 51 158-209 23-74 (219)
427 1zcj_A Peroxisomal bifunctiona 20.1 36 0.0012 31.9 1.5 86 139-233 38-148 (463)
No 1
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.78 E-value=1e-19 Score=155.57 Aligned_cols=147 Identities=7% Similarity=-0.015 Sum_probs=108.6
Q ss_pred cCCceeeccCcCCccccCCCCCCCeEEEEeCCHHHHHhcCC---CCcEEEeccCCCCCCCCCCCCeeEEEecccccccC-
Q 022305 137 YYSEVFPPSNTPGVSHFPPGYKQDRIVGMGMNEEELKRNPV---LTEYVVQDLNLNPKLPFEDNSFDVITNVVSVDYLT- 212 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~~~~~~~~~~~v~gvD~S~~ml~~a~~---~~~~~~~D~~~~~~lpf~~~~FD~Vis~~~l~~~~- 212 (299)
...+|||+|||+|.........+.+++|+|+|+.|++.+++ +++++++|+ ..+++++++||+|++..+++|++
T Consensus 41 ~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~---~~~~~~~~~fD~v~~~~~l~~~~~ 117 (203)
T 3h2b_A 41 VDGVILDVGSGTGRWTGHLASLGHQIEGLEPATRLVELARQTHPSVTFHHGTI---TDLSDSPKRWAGLLAWYSLIHMGP 117 (203)
T ss_dssp CCSCEEEETCTTCHHHHHHHHTTCCEEEECCCHHHHHHHHHHCTTSEEECCCG---GGGGGSCCCEEEEEEESSSTTCCT
T ss_pred CCCeEEEecCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHHhCCCCeEEeCcc---cccccCCCCeEEEEehhhHhcCCH
Confidence 36799999999997333322236799999999999998876 488999999 78899899999999999999997
Q ss_pred -CHHHHHHHHHhhccCCcEEEEEecCcchHHHHHHhhhhcCCCch---hhhHHHHHHHhCCCCCCeeeecCCCCCCCCCe
Q 022305 213 -KPIEVFKEMCQVLKPGGLAIVSFSNRCFWTKAISIWTSTGDADH---VMIVGAYFHYAGGYEPPQAVDISPNPGRSDPM 288 (299)
Q Consensus 213 -d~~~~l~ei~rvLkpGG~lii~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~aGF~~v~~~~~~~~~~~~~p~ 288 (299)
++..+|+++.++|||||.+++.+.+...... +.......+ ...+.+.+ ..+||+.+++...+. .|.
T Consensus 118 ~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l-~~~Gf~~~~~~~~~~-----~p~ 187 (203)
T 3h2b_A 118 GELPDALVALRMAVEDGGGLLMSFFSGPSLEP----MYHPVATAYRWPLPELAQAL-ETAGFQVTSSHWDPR-----FPH 187 (203)
T ss_dssp TTHHHHHHHHHHTEEEEEEEEEEEECCSSCEE----ECCSSSCEEECCHHHHHHHH-HHTTEEEEEEEECTT-----SSE
T ss_pred HHHHHHHHHHHHHcCCCcEEEEEEccCCchhh----hhchhhhhccCCHHHHHHHH-HHCCCcEEEEEecCC-----Ccc
Confidence 8999999999999999999998766433110 111000111 12233333 569999999887765 566
Q ss_pred EEEEEEec
Q 022305 289 YVVYSRKA 296 (299)
Q Consensus 289 ~~v~arK~ 296 (299)
-.++..|.
T Consensus 188 ~~l~~~~~ 195 (203)
T 3h2b_A 188 AYLTAEAS 195 (203)
T ss_dssp EEEEEEEC
T ss_pred hhhhhhhh
Confidence 66655554
No 2
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.78 E-value=2.6e-19 Score=160.33 Aligned_cols=97 Identities=12% Similarity=0.157 Sum_probs=84.0
Q ss_pred hcCCceeeccCcCCccccCCCCCCCeEEEEeCCHHHHHhcCC--CCcEEEeccCCCCCCCCCCCCeeEEEecccccccCC
Q 022305 136 KYYSEVFPPSNTPGVSHFPPGYKQDRIVGMGMNEEELKRNPV--LTEYVVQDLNLNPKLPFEDNSFDVITNVVSVDYLTK 213 (299)
Q Consensus 136 ~~~~~vLDiGcG~G~~~~~~~~~~~~v~gvD~S~~ml~~a~~--~~~~~~~D~~~~~~lpf~~~~FD~Vis~~~l~~~~d 213 (299)
....+|||+|||+|.........+.+|+|+|+|+.|++.|++ +++++++|+ +++|+++++||+|+|..++||+ +
T Consensus 38 ~~~~~vLDvGcGtG~~~~~l~~~~~~v~gvD~s~~ml~~a~~~~~v~~~~~~~---e~~~~~~~sfD~v~~~~~~h~~-~ 113 (257)
T 4hg2_A 38 PARGDALDCGCGSGQASLGLAEFFERVHAVDPGEAQIRQALRHPRVTYAVAPA---EDTGLPPASVDVAIAAQAMHWF-D 113 (257)
T ss_dssp SCSSEEEEESCTTTTTHHHHHTTCSEEEEEESCHHHHHTCCCCTTEEEEECCT---TCCCCCSSCEEEEEECSCCTTC-C
T ss_pred CCCCCEEEEcCCCCHHHHHHHHhCCEEEEEeCcHHhhhhhhhcCCceeehhhh---hhhcccCCcccEEEEeeehhHh-h
Confidence 344689999999997555444456899999999999999887 488999999 8999999999999999999887 6
Q ss_pred HHHHHHHHHhhccCCcEEEEEec
Q 022305 214 PIEVFKEMCQVLKPGGLAIVSFS 236 (299)
Q Consensus 214 ~~~~l~ei~rvLkpGG~lii~~~ 236 (299)
+.++++|++|+|||||.|++...
T Consensus 114 ~~~~~~e~~rvLkpgG~l~~~~~ 136 (257)
T 4hg2_A 114 LDRFWAELRRVARPGAVFAAVTY 136 (257)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHHHHHcCCCCEEEEEEC
Confidence 88999999999999998877543
No 3
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.78 E-value=4.7e-19 Score=153.07 Aligned_cols=153 Identities=16% Similarity=0.168 Sum_probs=110.5
Q ss_pred HHHHHHhh-hcCCceeeccCcCCccccCC--CC-CCCeEEEEeCCHHHHHhcCC--------CCcEEEeccCCCCCCCCC
Q 022305 128 DPAIAALT-KYYSEVFPPSNTPGVSHFPP--GY-KQDRIVGMGMNEEELKRNPV--------LTEYVVQDLNLNPKLPFE 195 (299)
Q Consensus 128 ~~~~~~l~-~~~~~vLDiGcG~G~~~~~~--~~-~~~~v~gvD~S~~ml~~a~~--------~~~~~~~D~~~~~~lpf~ 195 (299)
..+++.+. ....+|||+|||+|...... .. +..+++|+|+|+.|++.+++ +++++.+|+ ..++++
T Consensus 27 ~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~---~~~~~~ 103 (219)
T 3dh0_A 27 EKVLKEFGLKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEE---NKIPLP 103 (219)
T ss_dssp HHHHHHHTCCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBT---TBCSSC
T ss_pred HHHHHHhCCCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeccc---ccCCCC
Confidence 33445442 34568999999999633322 21 45799999999999987754 378999999 888899
Q ss_pred CCCeeEEEecccccccCCHHHHHHHHHhhccCCcEEEEEecCcchHHHHHHhhhhcCCCc---hhhhHHHHHHHhCCCCC
Q 022305 196 DNSFDVITNVVSVDYLTKPIEVFKEMCQVLKPGGLAIVSFSNRCFWTKAISIWTSTGDAD---HVMIVGAYFHYAGGYEP 272 (299)
Q Consensus 196 ~~~FD~Vis~~~l~~~~d~~~~l~ei~rvLkpGG~lii~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~aGF~~ 272 (299)
+++||+|++..+++|++++..+++++.++|||||.+++......... ...... ....+.+.+ +.+||+.
T Consensus 104 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~-------~~~~~~~~~~~~~~~~~l-~~~Gf~~ 175 (219)
T 3dh0_A 104 DNTVDFIFMAFTFHELSEPLKFLEELKRVAKPFAYLAIIDWKKEERD-------KGPPPEEVYSEWEVGLIL-EDAGIRV 175 (219)
T ss_dssp SSCEEEEEEESCGGGCSSHHHHHHHHHHHEEEEEEEEEEEECSSCCS-------SSCCGGGSCCHHHHHHHH-HHTTCEE
T ss_pred CCCeeEEEeehhhhhcCCHHHHHHHHHHHhCCCeEEEEEEecccccc-------cCCchhcccCHHHHHHHH-HHCCCEE
Confidence 99999999999999999999999999999999999988754422110 000000 111223333 5699999
Q ss_pred CeeeecCCCCCCCCCeEEEEEEecC
Q 022305 273 PQAVDISPNPGRSDPMYVVYSRKAS 297 (299)
Q Consensus 273 v~~~~~~~~~~~~~p~~~v~arK~~ 297 (299)
+++.... ...|.++++|++
T Consensus 176 ~~~~~~~------~~~~~~~~~k~~ 194 (219)
T 3dh0_A 176 GRVVEVG------KYCFGVYAMIVK 194 (219)
T ss_dssp EEEEEET------TTEEEEEEECC-
T ss_pred EEEEeeC------CceEEEEEEecc
Confidence 9887765 367889999875
No 4
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.77 E-value=1.4e-18 Score=155.83 Aligned_cols=101 Identities=13% Similarity=0.240 Sum_probs=80.7
Q ss_pred HHHhhhcCCceeeccCcCCccc--cCC--CCCCCeEEEEeCCHHHHHhcCC---------CCcEEEeccCCCCCCCCCCC
Q 022305 131 IAALTKYYSEVFPPSNTPGVSH--FPP--GYKQDRIVGMGMNEEELKRNPV---------LTEYVVQDLNLNPKLPFEDN 197 (299)
Q Consensus 131 ~~~l~~~~~~vLDiGcG~G~~~--~~~--~~~~~~v~gvD~S~~ml~~a~~---------~~~~~~~D~~~~~~lpf~~~ 197 (299)
.++..+...+|||+|||+|... +.. ..++++|+|+|+|+.|++.|++ +++++++|+ .++|++
T Consensus 64 ~~~~~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~---~~~~~~-- 138 (261)
T 4gek_A 64 AERFVQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDI---RDIAIE-- 138 (261)
T ss_dssp HHHHCCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCT---TTCCCC--
T ss_pred HHHhCCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeeccc---cccccc--
Confidence 3444455679999999999633 222 2357899999999999998764 378999999 788874
Q ss_pred CeeEEEecccccccCCH--HHHHHHHHhhccCCcEEEEEec
Q 022305 198 SFDVITNVVSVDYLTKP--IEVFKEMCQVLKPGGLAIVSFS 236 (299)
Q Consensus 198 ~FD~Vis~~~l~~~~d~--~~~l~ei~rvLkpGG~lii~~~ 236 (299)
.||+|+++++++|+++. ..+|++++|+|||||.+++...
T Consensus 139 ~~d~v~~~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~ 179 (261)
T 4gek_A 139 NASMVVLNFTLQFLEPSERQALLDKIYQGLNPGGALVLSEK 179 (261)
T ss_dssp SEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ccccceeeeeeeecCchhHhHHHHHHHHHcCCCcEEEEEec
Confidence 59999999999999744 5789999999999999888643
No 5
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.77 E-value=1.7e-19 Score=159.55 Aligned_cols=100 Identities=15% Similarity=0.259 Sum_probs=84.5
Q ss_pred cCCceeeccCcCCccccCCCCCCC-eEEEEeCCHHHHHhcCC-----CCcEEEeccCCCCCCCCCCCCeeEEEecccccc
Q 022305 137 YYSEVFPPSNTPGVSHFPPGYKQD-RIVGMGMNEEELKRNPV-----LTEYVVQDLNLNPKLPFEDNSFDVITNVVSVDY 210 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~~~~~~~~~~-~v~gvD~S~~ml~~a~~-----~~~~~~~D~~~~~~lpf~~~~FD~Vis~~~l~~ 210 (299)
...+|||+|||+|.........+. +++|+|+|+.|++.+++ +++++++|+ ..+++++++||+|++..+++|
T Consensus 44 ~~~~vLD~GcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~---~~~~~~~~~fD~v~~~~~l~~ 120 (253)
T 3g5l_A 44 NQKTVLDLGCGFGWHCIYAAEHGAKKVLGIDLSERMLTEAKRKTTSPVVCYEQKAI---EDIAIEPDAYNVVLSSLALHY 120 (253)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHCCCTTEEEEECCG---GGCCCCTTCEEEEEEESCGGG
T ss_pred CCCEEEEECCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHhhccCCeEEEEcch---hhCCCCCCCeEEEEEchhhhh
Confidence 346899999999963332222233 99999999999998765 478999999 788998999999999999999
Q ss_pred cCCHHHHHHHHHhhccCCcEEEEEecCcc
Q 022305 211 LTKPIEVFKEMCQVLKPGGLAIVSFSNRC 239 (299)
Q Consensus 211 ~~d~~~~l~ei~rvLkpGG~lii~~~~~~ 239 (299)
++++.++|+++.++|||||.++++++++.
T Consensus 121 ~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 149 (253)
T 3g5l_A 121 IASFDDICKKVYINLKSSGSFIFSVEHPV 149 (253)
T ss_dssp CSCHHHHHHHHHHHEEEEEEEEEEEECHH
T ss_pred hhhHHHHHHHHHHHcCCCcEEEEEeCCCc
Confidence 99999999999999999999999877643
No 6
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.76 E-value=1.4e-18 Score=152.01 Aligned_cols=102 Identities=13% Similarity=0.133 Sum_probs=85.6
Q ss_pred CCceeeccCcCCccccCCCCCCCeEEEEeCCHHHHHhcCC----CCcEEEeccCCCCCCCCCCCCeeEEEecccccccCC
Q 022305 138 YSEVFPPSNTPGVSHFPPGYKQDRIVGMGMNEEELKRNPV----LTEYVVQDLNLNPKLPFEDNSFDVITNVVSVDYLTK 213 (299)
Q Consensus 138 ~~~vLDiGcG~G~~~~~~~~~~~~v~gvD~S~~ml~~a~~----~~~~~~~D~~~~~~lpf~~~~FD~Vis~~~l~~~~d 213 (299)
..+|||+|||+|.........+.+|+|+|+|+.|++.+++ +++++++|+ +.+ +++++||+|++.++++|++|
T Consensus 43 ~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~v~~~~~d~---~~~-~~~~~fD~v~~~~~l~~~~~ 118 (250)
T 2p7i_A 43 PGNLLELGSFKGDFTSRLQEHFNDITCVEASEEAISHAQGRLKDGITYIHSRF---EDA-QLPRRYDNIVLTHVLEHIDD 118 (250)
T ss_dssp SSCEEEESCTTSHHHHHHTTTCSCEEEEESCHHHHHHHHHHSCSCEEEEESCG---GGC-CCSSCEEEEEEESCGGGCSS
T ss_pred CCcEEEECCCCCHHHHHHHHhCCcEEEEeCCHHHHHHHHHhhhCCeEEEEccH---HHc-CcCCcccEEEEhhHHHhhcC
Confidence 4689999999997443333345689999999999987765 478899998 666 56789999999999999999
Q ss_pred HHHHHHHHH-hhccCCcEEEEEecCcchHHH
Q 022305 214 PIEVFKEMC-QVLKPGGLAIVSFSNRCFWTK 243 (299)
Q Consensus 214 ~~~~l~ei~-rvLkpGG~lii~~~~~~~~~~ 243 (299)
+..+|+++. |+|||||.+++.+++......
T Consensus 119 ~~~~l~~~~~~~LkpgG~l~i~~~~~~~~~~ 149 (250)
T 2p7i_A 119 PVALLKRINDDWLAEGGRLFLVCPNANAVSR 149 (250)
T ss_dssp HHHHHHHHHHTTEEEEEEEEEEEECTTCHHH
T ss_pred HHHHHHHHHHHhcCCCCEEEEEcCChHHHHH
Confidence 999999999 999999999999988655443
No 7
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.76 E-value=1.6e-18 Score=149.84 Aligned_cols=158 Identities=13% Similarity=0.115 Sum_probs=109.6
Q ss_pred HHHHHhh-hcCCceeeccCcCCccccCCCCCCCeEEEEeCCHHHHHhcCC----CCcEEEeccCCCCCCCCCCCCeeEEE
Q 022305 129 PAIAALT-KYYSEVFPPSNTPGVSHFPPGYKQDRIVGMGMNEEELKRNPV----LTEYVVQDLNLNPKLPFEDNSFDVIT 203 (299)
Q Consensus 129 ~~~~~l~-~~~~~vLDiGcG~G~~~~~~~~~~~~v~gvD~S~~ml~~a~~----~~~~~~~D~~~~~~lpf~~~~FD~Vi 203 (299)
.+++.+. ....+|||+|||+|.........+.+++|+|+|+.|++.+++ +++++.+|+ ..++++ ++||+|+
T Consensus 36 ~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~d~---~~~~~~-~~fD~v~ 111 (220)
T 3hnr_A 36 DILEDVVNKSFGNVLEFGVGTGNLTNKLLLAGRTVYGIEPSREMRMIAKEKLPKEFSITEGDF---LSFEVP-TSIDTIV 111 (220)
T ss_dssp HHHHHHHHTCCSEEEEECCTTSHHHHHHHHTTCEEEEECSCHHHHHHHHHHSCTTCCEESCCS---SSCCCC-SCCSEEE
T ss_pred HHHHHhhccCCCeEEEeCCCCCHHHHHHHhCCCeEEEEeCCHHHHHHHHHhCCCceEEEeCCh---hhcCCC-CCeEEEE
Confidence 3444443 345799999999997333322236899999999999987765 488999999 788887 9999999
Q ss_pred ecccccccCCHHH--HHHHHHhhccCCcEEEEEecCcch---HHHHHHhhhhcC-----------CCchhhhHHHHHHHh
Q 022305 204 NVVSVDYLTKPIE--VFKEMCQVLKPGGLAIVSFSNRCF---WTKAISIWTSTG-----------DADHVMIVGAYFHYA 267 (299)
Q Consensus 204 s~~~l~~~~d~~~--~l~ei~rvLkpGG~lii~~~~~~~---~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~ 267 (299)
+..+++|++++.. +|+++.|+|||||.+++..++... +......+...+ .......+.+.+ +.
T Consensus 112 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~ 190 (220)
T 3hnr_A 112 STYAFHHLTDDEKNVAIAKYSQLLNKGGKIVFADTIFADQDAYDKTVEAAKQRGFHQLANDLQTEYYTRIPVMQTIF-EN 190 (220)
T ss_dssp EESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEEECBSSHHHHHHHHHHHHHTTCHHHHHHHHHSCCCBHHHHHHHH-HH
T ss_pred ECcchhcCChHHHHHHHHHHHHhcCCCCEEEEEeccccChHHHHHHHHHHHhCCCccchhhcchhhcCCHHHHHHHH-HH
Confidence 9999999999877 999999999999999998665322 222222221111 000112223333 66
Q ss_pred CCCCCCeeeecCCCCCCCCCeEEEEEEecCC
Q 022305 268 GGYEPPQAVDISPNPGRSDPMYVVYSRKAST 298 (299)
Q Consensus 268 aGF~~v~~~~~~~~~~~~~p~~~v~arK~~~ 298 (299)
+||+.+.+.. . +-.+++.++|+++
T Consensus 191 aGf~v~~~~~-~------~~~w~~~~~~~~~ 214 (220)
T 3hnr_A 191 NGFHVTFTRL-N------HFVWVMEATKQLE 214 (220)
T ss_dssp TTEEEEEEEC-S------SSEEEEEEEECSC
T ss_pred CCCEEEEeec-c------ceEEEEeehhhhh
Confidence 9997554422 2 4668888888764
No 8
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.76 E-value=5.2e-19 Score=154.90 Aligned_cols=141 Identities=18% Similarity=0.289 Sum_probs=103.4
Q ss_pred hcCCceeeccCcCCccccCCCCCCCeEEEEeCCHHHHHhcCCC-----CcEEEeccCCCCCCCCCCCCeeEEEecccccc
Q 022305 136 KYYSEVFPPSNTPGVSHFPPGYKQDRIVGMGMNEEELKRNPVL-----TEYVVQDLNLNPKLPFEDNSFDVITNVVSVDY 210 (299)
Q Consensus 136 ~~~~~vLDiGcG~G~~~~~~~~~~~~v~gvD~S~~ml~~a~~~-----~~~~~~D~~~~~~lpf~~~~FD~Vis~~~l~~ 210 (299)
....+|||+|||+|.........+.+++|+|+|+.|++.++++ ++++++|+ ..+++++++||+|++..+++|
T Consensus 52 ~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~---~~~~~~~~~fD~v~~~~~l~~ 128 (242)
T 3l8d_A 52 KKEAEVLDVGCGDGYGTYKLSRTGYKAVGVDISEVMIQKGKERGEGPDLSFIKGDL---SSLPFENEQFEAIMAINSLEW 128 (242)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHTTTCBTTEEEEECBT---TBCSSCTTCEEEEEEESCTTS
T ss_pred CCCCeEEEEcCCCCHHHHHHHHcCCeEEEEECCHHHHHHHHhhcccCCceEEEcch---hcCCCCCCCccEEEEcChHhh
Confidence 3457999999999974333332367999999999999987653 78999999 888999999999999999999
Q ss_pred cCCHHHHHHHHHhhccCCcEEEEEecCcchHHHHHHhhhhcCCCch-----hhhHHHHHHHhCCCCCCeeeecCC
Q 022305 211 LTKPIEVFKEMCQVLKPGGLAIVSFSNRCFWTKAISIWTSTGDADH-----VMIVGAYFHYAGGYEPPQAVDISP 280 (299)
Q Consensus 211 ~~d~~~~l~ei~rvLkpGG~lii~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~aGF~~v~~~~~~~ 280 (299)
++++..+++++.++|||||.+++.+.+..................+ ...+.+.+ ..+||+.+++..+..
T Consensus 129 ~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gf~~~~~~~~~~ 202 (242)
T 3l8d_A 129 TEEPLRALNEIKRVLKSDGYACIAILGPTAKPRENSYPRLYGKDVVCNTMMPWEFEQLV-KEQGFKVVDGIGVYK 202 (242)
T ss_dssp SSCHHHHHHHHHHHEEEEEEEEEEEECTTCGGGGGGGGGGGTCCCSSCCCCHHHHHHHH-HHTTEEEEEEEEEEC
T ss_pred ccCHHHHHHHHHHHhCCCeEEEEEEcCCcchhhhhhhhhhccccccccCCCHHHHHHHH-HHcCCEEEEeecccc
Confidence 9999999999999999999999987654322211111111111111 11233333 569999999887643
No 9
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.76 E-value=6.4e-18 Score=145.22 Aligned_cols=104 Identities=22% Similarity=0.246 Sum_probs=88.2
Q ss_pred HHHHhhhcCCceeeccCcCCccccCCCCCCC-eEEEEeCCHHHHHhcCC---CCcEEEeccCCCCCCCCCCCCeeEEEec
Q 022305 130 AIAALTKYYSEVFPPSNTPGVSHFPPGYKQD-RIVGMGMNEEELKRNPV---LTEYVVQDLNLNPKLPFEDNSFDVITNV 205 (299)
Q Consensus 130 ~~~~l~~~~~~vLDiGcG~G~~~~~~~~~~~-~v~gvD~S~~ml~~a~~---~~~~~~~D~~~~~~lpf~~~~FD~Vis~ 205 (299)
++..+.....+|||+|||+|...... +. +++|+|+|+.|++.+++ +++++.+|+ ..+++++++||+|++.
T Consensus 29 ~l~~~~~~~~~vLdiG~G~G~~~~~l---~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~---~~~~~~~~~fD~v~~~ 102 (211)
T 2gs9_A 29 ALKGLLPPGESLLEVGAGTGYWLRRL---PYPQKVGVEPSEAMLAVGRRRAPEATWVRAWG---EALPFPGESFDVVLLF 102 (211)
T ss_dssp HHHTTCCCCSEEEEETCTTCHHHHHC---CCSEEEEECCCHHHHHHHHHHCTTSEEECCCT---TSCCSCSSCEEEEEEE
T ss_pred HHHHhcCCCCeEEEECCCCCHhHHhC---CCCeEEEEeCCHHHHHHHHHhCCCcEEEEccc---ccCCCCCCcEEEEEEc
Confidence 34444445578999999999633333 45 99999999999998775 488999999 8889999999999999
Q ss_pred ccccccCCHHHHHHHHHhhccCCcEEEEEecCcc
Q 022305 206 VSVDYLTKPIEVFKEMCQVLKPGGLAIVSFSNRC 239 (299)
Q Consensus 206 ~~l~~~~d~~~~l~ei~rvLkpGG~lii~~~~~~ 239 (299)
.+++|++++.++++++.++|||||.+++.+++..
T Consensus 103 ~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~ 136 (211)
T 2gs9_A 103 TTLEFVEDVERVLLEARRVLRPGGALVVGVLEAL 136 (211)
T ss_dssp SCTTTCSCHHHHHHHHHHHEEEEEEEEEEEECTT
T ss_pred ChhhhcCCHHHHHHHHHHHcCCCCEEEEEecCCc
Confidence 9999999999999999999999999999887754
No 10
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.75 E-value=7.7e-19 Score=150.83 Aligned_cols=107 Identities=19% Similarity=0.220 Sum_probs=86.3
Q ss_pred HHHHHHhhhcCCceeeccCcCCccccCCC-CCCCeEEEEeCCHHHHHhcCC---------CCcEEEeccCCCCCCCCCCC
Q 022305 128 DPAIAALTKYYSEVFPPSNTPGVSHFPPG-YKQDRIVGMGMNEEELKRNPV---------LTEYVVQDLNLNPKLPFEDN 197 (299)
Q Consensus 128 ~~~~~~l~~~~~~vLDiGcG~G~~~~~~~-~~~~~v~gvD~S~~ml~~a~~---------~~~~~~~D~~~~~~lpf~~~ 197 (299)
..+++.+.....+|||+|||+|....... .++.+++|+|+|+.|++.+++ +++++++|+ ..++++++
T Consensus 34 ~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~---~~~~~~~~ 110 (219)
T 3dlc_A 34 ENIINRFGITAGTCIDIGSGPGALSIALAKQSDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDV---HNIPIEDN 110 (219)
T ss_dssp HHHHHHHCCCEEEEEEETCTTSHHHHHHHHHSEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBT---TBCSSCTT
T ss_pred HHHHHhcCCCCCEEEEECCCCCHHHHHHHHcCCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCH---HHCCCCcc
Confidence 33444443223489999999996322211 156799999999999987654 378999999 88899999
Q ss_pred CeeEEEecccccccCCHHHHHHHHHhhccCCcEEEEEecC
Q 022305 198 SFDVITNVVSVDYLTKPIEVFKEMCQVLKPGGLAIVSFSN 237 (299)
Q Consensus 198 ~FD~Vis~~~l~~~~d~~~~l~ei~rvLkpGG~lii~~~~ 237 (299)
+||+|++..+++|++++..+++++.++|||||.+++....
T Consensus 111 ~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 150 (219)
T 3dlc_A 111 YADLIVSRGSVFFWEDVATAFREIYRILKSGGKTYIGGGF 150 (219)
T ss_dssp CEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred cccEEEECchHhhccCHHHHHHHHHHhCCCCCEEEEEecc
Confidence 9999999999999999999999999999999999987544
No 11
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.75 E-value=8.8e-19 Score=153.37 Aligned_cols=99 Identities=21% Similarity=0.281 Sum_probs=83.7
Q ss_pred cCCceeeccCcCCccccCCCCCCC-eEEEEeCCHHHHHhcCCC-----CcEEEeccCCCCCCCCCCCCeeEEEecccccc
Q 022305 137 YYSEVFPPSNTPGVSHFPPGYKQD-RIVGMGMNEEELKRNPVL-----TEYVVQDLNLNPKLPFEDNSFDVITNVVSVDY 210 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~~~~~~~~~~-~v~gvD~S~~ml~~a~~~-----~~~~~~D~~~~~~lpf~~~~FD~Vis~~~l~~ 210 (299)
...+|||+|||+|.........+. +++|+|+|+.|++.++++ ++++.+|+ ..+++++++||+|++..+++|
T Consensus 43 ~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~---~~~~~~~~~fD~v~~~~~l~~ 119 (243)
T 3bkw_A 43 GGLRIVDLGCGFGWFCRWAHEHGASYVLGLDLSEKMLARARAAGPDTGITYERADL---DKLHLPQDSFDLAYSSLALHY 119 (243)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCSSSEEEEECCG---GGCCCCTTCEEEEEEESCGGG
T ss_pred CCCEEEEEcCcCCHHHHHHHHCCCCeEEEEcCCHHHHHHHHHhcccCCceEEEcCh---hhccCCCCCceEEEEeccccc
Confidence 456899999999963322222244 999999999999987653 68899999 778888899999999999999
Q ss_pred cCCHHHHHHHHHhhccCCcEEEEEecCc
Q 022305 211 LTKPIEVFKEMCQVLKPGGLAIVSFSNR 238 (299)
Q Consensus 211 ~~d~~~~l~ei~rvLkpGG~lii~~~~~ 238 (299)
++++..+++++.++|||||.+++.++++
T Consensus 120 ~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 147 (243)
T 3bkw_A 120 VEDVARLFRTVHQALSPGGHFVFSTEHP 147 (243)
T ss_dssp CSCHHHHHHHHHHHEEEEEEEEEEEECH
T ss_pred cchHHHHHHHHHHhcCcCcEEEEEeCCc
Confidence 9999999999999999999999988764
No 12
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.74 E-value=8.3e-19 Score=154.16 Aligned_cols=140 Identities=13% Similarity=0.037 Sum_probs=106.8
Q ss_pred cCCceeeccCcCCccccCCCCCCCeEEEEeCCHHHHHhcCCCCcEEEeccCCCCCC--CCCCCCeeEEEecccccccCC-
Q 022305 137 YYSEVFPPSNTPGVSHFPPGYKQDRIVGMGMNEEELKRNPVLTEYVVQDLNLNPKL--PFEDNSFDVITNVVSVDYLTK- 213 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~~~~~~~~~~~v~gvD~S~~ml~~a~~~~~~~~~D~~~~~~l--pf~~~~FD~Vis~~~l~~~~d- 213 (299)
...+|||+|||+|.........+.+|+|+|+|+.|++.++++++++.+|+ ..+ ++++++||+|+|..+++|+++
T Consensus 41 ~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~d~---~~~~~~~~~~~fD~i~~~~~l~~~~~~ 117 (240)
T 3dli_A 41 GCRRVLDIGCGRGEFLELCKEEGIESIGVDINEDMIKFCEGKFNVVKSDA---IEYLKSLPDKYLDGVMISHFVEHLDPE 117 (240)
T ss_dssp TCSCEEEETCTTTHHHHHHHHHTCCEEEECSCHHHHHHHHTTSEEECSCH---HHHHHTSCTTCBSEEEEESCGGGSCGG
T ss_pred CCCeEEEEeCCCCHHHHHHHhCCCcEEEEECCHHHHHHHHhhcceeeccH---HHHhhhcCCCCeeEEEECCchhhCCcH
Confidence 34689999999997433322236789999999999999998899999998 554 788999999999999999994
Q ss_pred -HHHHHHHHHhhccCCcEEEEEecCcchHHHHHHhhhhcCCCc--hhhhHHHHHHHhCCCCCCeeeecCC
Q 022305 214 -PIEVFKEMCQVLKPGGLAIVSFSNRCFWTKAISIWTSTGDAD--HVMIVGAYFHYAGGYEPPQAVDISP 280 (299)
Q Consensus 214 -~~~~l~ei~rvLkpGG~lii~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~aGF~~v~~~~~~~ 280 (299)
...+++++.|+|||||.+++.+++...+......|....... ....+...+ ..+||+.+++....+
T Consensus 118 ~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l-~~aGf~~~~~~~~~~ 186 (240)
T 3dli_A 118 RLFELLSLCYSKMKYSSYIVIESPNPTSLYSLINFYIDPTHKKPVHPETLKFIL-EYLGFRDVKIEFFEE 186 (240)
T ss_dssp GHHHHHHHHHHHBCTTCCEEEEEECTTSHHHHHHHTTSTTCCSCCCHHHHHHHH-HHHTCEEEEEEEECC
T ss_pred HHHHHHHHHHHHcCCCcEEEEEeCCcchhHHHHHHhcCccccccCCHHHHHHHH-HHCCCeEEEEEEecc
Confidence 499999999999999999999988766655555443222111 112233334 558999988877764
No 13
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.74 E-value=8.3e-19 Score=153.45 Aligned_cols=100 Identities=20% Similarity=0.270 Sum_probs=83.6
Q ss_pred cCCceeeccCcCCccccCCCCCCCeEEEEeCCHHHHHhcCC-------CCcEEEeccCCCCCCCCCCCCeeEEEecc-cc
Q 022305 137 YYSEVFPPSNTPGVSHFPPGYKQDRIVGMGMNEEELKRNPV-------LTEYVVQDLNLNPKLPFEDNSFDVITNVV-SV 208 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~~~~~~~~~~~v~gvD~S~~ml~~a~~-------~~~~~~~D~~~~~~lpf~~~~FD~Vis~~-~l 208 (299)
...+|||+|||+|.........+.+++|+|+|+.|++.+++ +++++++|+ ..++++ ++||+|++.. ++
T Consensus 37 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~d~---~~~~~~-~~fD~v~~~~~~l 112 (246)
T 1y8c_A 37 VFDDYLDLACGTGNLTENLCPKFKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQDI---SNLNIN-RKFDLITCCLDST 112 (246)
T ss_dssp CTTEEEEETCTTSTTHHHHGGGSSEEEEECSCHHHHHHHHHHHHHTTCCCEEECCCG---GGCCCS-CCEEEEEECTTGG
T ss_pred CCCeEEEeCCCCCHHHHHHHHCCCcEEEEECCHHHHHHHHHHHhhcCCCeEEEeccc---ccCCcc-CCceEEEEcCccc
Confidence 34689999999997444333336799999999999987765 478999999 777776 8899999998 99
Q ss_pred ccc---CCHHHHHHHHHhhccCCcEEEEEecCcch
Q 022305 209 DYL---TKPIEVFKEMCQVLKPGGLAIVSFSNRCF 240 (299)
Q Consensus 209 ~~~---~d~~~~l~ei~rvLkpGG~lii~~~~~~~ 240 (299)
+|+ +++..+|+++.++|||||.+++++++...
T Consensus 113 ~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~ 147 (246)
T 1y8c_A 113 NYIIDSDDLKKYFKAVSNHLKEGGVFIFDINSYYK 147 (246)
T ss_dssp GGCCSHHHHHHHHHHHHTTEEEEEEEEEEEECHHH
T ss_pred cccCCHHHHHHHHHHHHHhcCCCcEEEEEecCHHH
Confidence 999 57789999999999999999998887543
No 14
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.74 E-value=9.7e-18 Score=145.44 Aligned_cols=151 Identities=18% Similarity=0.169 Sum_probs=108.2
Q ss_pred CCceeeccCcCCccccCCCCCCCeEEEEeCCHHHHHhcCC-CCcEEEeccCCCCCCCCCCCCeeEEEecccccccCCHHH
Q 022305 138 YSEVFPPSNTPGVSHFPPGYKQDRIVGMGMNEEELKRNPV-LTEYVVQDLNLNPKLPFEDNSFDVITNVVSVDYLTKPIE 216 (299)
Q Consensus 138 ~~~vLDiGcG~G~~~~~~~~~~~~v~gvD~S~~ml~~a~~-~~~~~~~D~~~~~~lpf~~~~FD~Vis~~~l~~~~d~~~ 216 (299)
..+|||+|||+|......... +|+|+|+.|++.+++ .++++.+|+ ..+++++++||+|++..+++|++++..
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~----~~vD~s~~~~~~a~~~~~~~~~~d~---~~~~~~~~~fD~v~~~~~l~~~~~~~~ 120 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK----IGVEPSERMAEIARKRGVFVLKGTA---ENLPLKDESFDFALMVTTICFVDDPER 120 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC----EEEESCHHHHHHHHHTTCEEEECBT---TBCCSCTTCEEEEEEESCGGGSSCHHH
T ss_pred CCcEEEeCCCCCHHHHHHHHH----hccCCCHHHHHHHHhcCCEEEEccc---ccCCCCCCCeeEEEEcchHhhccCHHH
Confidence 579999999999744333222 999999999998876 588999999 788888899999999999999999999
Q ss_pred HHHHHHhhccCCcEEEEEecCcch-HHHHHHhhhhc-CCCch-----hhhHHHHHHHhCCCCCCeeeecCCCC-----C-
Q 022305 217 VFKEMCQVLKPGGLAIVSFSNRCF-WTKAISIWTST-GDADH-----VMIVGAYFHYAGGYEPPQAVDISPNP-----G- 283 (299)
Q Consensus 217 ~l~ei~rvLkpGG~lii~~~~~~~-~~~~~~~~~~~-~~~~~-----~~~~~~~~~~~aGF~~v~~~~~~~~~-----~- 283 (299)
+++++.++|||||.+++.+++... +...+...... ....+ ...+.+.+ ..+||+.+++......+ .
T Consensus 121 ~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l-~~~Gf~~~~~~~~~~~~p~~~~~~ 199 (219)
T 1vlm_A 121 ALKEAYRILKKGGYLIVGIVDRESFLGREYEKNKEKSVFYKNARFFSTEELMDLM-RKAGFEEFKVVQTLFKHPSELSEI 199 (219)
T ss_dssp HHHHHHHHEEEEEEEEEEEECSSSHHHHHHHHTTTC-CCSTTCCCCCHHHHHHHH-HHTTCEEEEEEEECCSCGGGCSSC
T ss_pred HHHHHHHHcCCCcEEEEEEeCCccHHHHHHHHHhcCcchhcccccCCHHHHHHHH-HHCCCeEEEEecccCCCCCccccc
Confidence 999999999999999998777533 22222221111 00111 12223333 56999998887763221 1
Q ss_pred -------CCCCeEEEEEEec
Q 022305 284 -------RSDPMYVVYSRKA 296 (299)
Q Consensus 284 -------~~~p~~~v~arK~ 296 (299)
..-.+++++|+|.
T Consensus 200 ~~~~~~~~~~~~~~i~a~K~ 219 (219)
T 1vlm_A 200 EPVKEGYGEGAFVVIRGTKK 219 (219)
T ss_dssp CCCEESSSSSSEEEEEEECC
T ss_pred hhhhcCCCCCeEEEEEecCC
Confidence 1124788888884
No 15
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.74 E-value=3.3e-18 Score=151.92 Aligned_cols=103 Identities=23% Similarity=0.329 Sum_probs=84.4
Q ss_pred HHHHhh-hcCCceeeccCcCCccccCCCCCCCeEEEEeCCHHHHHhcCC--------CCcEEEeccCCCCCCCCCCCCee
Q 022305 130 AIAALT-KYYSEVFPPSNTPGVSHFPPGYKQDRIVGMGMNEEELKRNPV--------LTEYVVQDLNLNPKLPFEDNSFD 200 (299)
Q Consensus 130 ~~~~l~-~~~~~vLDiGcG~G~~~~~~~~~~~~v~gvD~S~~ml~~a~~--------~~~~~~~D~~~~~~lpf~~~~FD 200 (299)
+++.+. ....+|||+|||+|...........+++|+|+|+.|++.+++ +++++++|+ +.+|+++++||
T Consensus 29 l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~---~~l~~~~~~fD 105 (260)
T 1vl5_A 29 LMQIAALKGNEEVLDVATGGGHVANAFAPFVKKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDA---EQMPFTDERFH 105 (260)
T ss_dssp HHHHHTCCSCCEEEEETCTTCHHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC----CCCSCTTCEE
T ss_pred HHHHhCCCCCCEEEEEeCCCCHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecH---HhCCCCCCCEE
Confidence 444442 356789999999997333222234599999999999987654 378999999 88999999999
Q ss_pred EEEecccccccCCHHHHHHHHHhhccCCcEEEEEe
Q 022305 201 VITNVVSVDYLTKPIEVFKEMCQVLKPGGLAIVSF 235 (299)
Q Consensus 201 ~Vis~~~l~~~~d~~~~l~ei~rvLkpGG~lii~~ 235 (299)
+|++..+++|++|+..+|+++.|+|||||.+++..
T Consensus 106 ~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~~~~ 140 (260)
T 1vl5_A 106 IVTCRIAAHHFPNPASFVSEAYRVLKKGGQLLLVD 140 (260)
T ss_dssp EEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEEhhhhHhcCCHHHHHHHHHHHcCCCCEEEEEE
Confidence 99999999999999999999999999999988864
No 16
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.72 E-value=2.2e-18 Score=155.28 Aligned_cols=106 Identities=14% Similarity=0.284 Sum_probs=87.4
Q ss_pred HHHhhhcCCceeeccCcCCccccCCCCCCCeEEEEeCCHHHHHhcCC---------CCcEEEeccCCCCCCC-CCCCCee
Q 022305 131 IAALTKYYSEVFPPSNTPGVSHFPPGYKQDRIVGMGMNEEELKRNPV---------LTEYVVQDLNLNPKLP-FEDNSFD 200 (299)
Q Consensus 131 ~~~l~~~~~~vLDiGcG~G~~~~~~~~~~~~v~gvD~S~~ml~~a~~---------~~~~~~~D~~~~~~lp-f~~~~FD 200 (299)
+..+.....+|||+|||+|.........+.+++|+|+|+.|++.+++ +++++++|+ ..++ +.+++||
T Consensus 62 l~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~---~~~~~~~~~~fD 138 (285)
T 4htf_A 62 LAEMGPQKLRVLDAGGGEGQTAIKMAERGHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAA---QDVASHLETPVD 138 (285)
T ss_dssp HHHTCSSCCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCG---GGTGGGCSSCEE
T ss_pred HHhcCCCCCEEEEeCCcchHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCH---HHhhhhcCCCce
Confidence 33333335689999999997443333337899999999999997764 367999999 7776 7889999
Q ss_pred EEEecccccccCCHHHHHHHHHhhccCCcEEEEEecCcc
Q 022305 201 VITNVVSVDYLTKPIEVFKEMCQVLKPGGLAIVSFSNRC 239 (299)
Q Consensus 201 ~Vis~~~l~~~~d~~~~l~ei~rvLkpGG~lii~~~~~~ 239 (299)
+|++..+++|++++..+++++.++|||||.+++.+++..
T Consensus 139 ~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 177 (285)
T 4htf_A 139 LILFHAVLEWVADPRSVLQTLWSVLRPGGVLSLMFYNAH 177 (285)
T ss_dssp EEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEEEBHH
T ss_pred EEEECchhhcccCHHHHHHHHHHHcCCCeEEEEEEeCCc
Confidence 999999999999999999999999999999999887643
No 17
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.72 E-value=1.4e-17 Score=148.44 Aligned_cols=142 Identities=11% Similarity=0.059 Sum_probs=102.2
Q ss_pred HHHHhh-hcCCceeeccCcCCccccCCCCCCCeEEEEeCCHHHHHhcCCC--CcEEEeccCCCCCCCCCCCCeeEEEecc
Q 022305 130 AIAALT-KYYSEVFPPSNTPGVSHFPPGYKQDRIVGMGMNEEELKRNPVL--TEYVVQDLNLNPKLPFEDNSFDVITNVV 206 (299)
Q Consensus 130 ~~~~l~-~~~~~vLDiGcG~G~~~~~~~~~~~~v~gvD~S~~ml~~a~~~--~~~~~~D~~~~~~lpf~~~~FD~Vis~~ 206 (299)
+.+.+. ....+|||+|||+|........++.+|+|+|+|+.|++.++++ ++++++|+ +.+++++++||+|++..
T Consensus 26 l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~d~---~~~~~~~~~fD~v~~~~ 102 (261)
T 3ege_A 26 IINLLNLPKGSVIADIGAGTGGYSVALANQGLFVYAVEPSIVMRQQAVVHPQVEWFTGYA---ENLALPDKSVDGVISIL 102 (261)
T ss_dssp HHHHHCCCTTCEEEEETCTTSHHHHHHHTTTCEEEEECSCHHHHHSSCCCTTEEEECCCT---TSCCSCTTCBSEEEEES
T ss_pred HHHHhCCCCCCEEEEEcCcccHHHHHHHhCCCEEEEEeCCHHHHHHHHhccCCEEEECch---hhCCCCCCCEeEEEEcc
Confidence 344442 3457899999999974443333678999999999999988774 78899999 88999999999999999
Q ss_pred cccccCCHHHHHHHHHhhccCCcEEEEEecCcc----hH-----HHHHHhhhhcCCCchhhhHHHHHHHhCCCCCCeeee
Q 022305 207 SVDYLTKPIEVFKEMCQVLKPGGLAIVSFSNRC----FW-----TKAISIWTSTGDADHVMIVGAYFHYAGGYEPPQAVD 277 (299)
Q Consensus 207 ~l~~~~d~~~~l~ei~rvLkpGG~lii~~~~~~----~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~aGF~~v~~~~ 277 (299)
+++|++|+..++++++|+|| ||.+++...+.. .| ........ ........+. .+ +++||+.+++..
T Consensus 103 ~l~~~~~~~~~l~~~~~~Lk-gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-~l-~~aGF~~v~~~~ 177 (261)
T 3ege_A 103 AIHHFSHLEKSFQEMQRIIR-DGTIVLLTFDIRLAQRIWLYDYFPFLWEDAL--RFLPLDEQIN-LL-QENTKRRVEAIP 177 (261)
T ss_dssp CGGGCSSHHHHHHHHHHHBC-SSCEEEEEECGGGCCCCGGGGTCHHHHHHHH--TSCCHHHHHH-HH-HHHHCSEEEEEE
T ss_pred hHhhccCHHHHHHHHHHHhC-CcEEEEEEcCCchhHHHHHHHHHHHHhhhhh--hhCCCHHHHH-HH-HHcCCCceeEEE
Confidence 99999999999999999999 996666544421 11 11111111 1111122233 33 669999888777
Q ss_pred cC
Q 022305 278 IS 279 (299)
Q Consensus 278 ~~ 279 (299)
+.
T Consensus 178 ~~ 179 (261)
T 3ege_A 178 FL 179 (261)
T ss_dssp CC
T ss_pred ec
Confidence 63
No 18
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.72 E-value=6.8e-18 Score=152.33 Aligned_cols=102 Identities=16% Similarity=0.160 Sum_probs=85.0
Q ss_pred cCCceeeccCcCCccccCCCCCCCeEEEEeCCHHHHHhcCC------------CCcEEEeccCCCCCCC---CCCCCeeE
Q 022305 137 YYSEVFPPSNTPGVSHFPPGYKQDRIVGMGMNEEELKRNPV------------LTEYVVQDLNLNPKLP---FEDNSFDV 201 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~~~~~~~~~~~v~gvD~S~~ml~~a~~------------~~~~~~~D~~~~~~lp---f~~~~FD~ 201 (299)
...+|||+|||+|.........+.+|+|+|+|+.|++.+++ ++.+..+|+ ..++ +++++||+
T Consensus 57 ~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~---~~~~~~~~~~~~fD~ 133 (293)
T 3thr_A 57 GCHRVLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANW---LTLDKDVPAGDGFDA 133 (293)
T ss_dssp TCCEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCG---GGHHHHSCCTTCEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecCh---hhCccccccCCCeEE
Confidence 34689999999997433333336699999999999998753 266888888 7777 88899999
Q ss_pred EEec-ccccccCC-------HHHHHHHHHhhccCCcEEEEEecCcchH
Q 022305 202 ITNV-VSVDYLTK-------PIEVFKEMCQVLKPGGLAIVSFSNRCFW 241 (299)
Q Consensus 202 Vis~-~~l~~~~d-------~~~~l~ei~rvLkpGG~lii~~~~~~~~ 241 (299)
|+|. .+++|+++ +.+++++++++|||||.+++++++....
T Consensus 134 V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~ 181 (293)
T 3thr_A 134 VICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHRNYDYI 181 (293)
T ss_dssp EEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEECHHHH
T ss_pred EEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEeCCHHHH
Confidence 9998 89999999 9999999999999999999998875433
No 19
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.71 E-value=1.6e-17 Score=143.57 Aligned_cols=149 Identities=19% Similarity=0.300 Sum_probs=107.1
Q ss_pred HHHHHhhhcCCceeeccCcCCccccCCCCCCCeEEEEeCCHHHHHhcCCC-CcEEEeccCCCCC--CCCCCCCeeEEEec
Q 022305 129 PAIAALTKYYSEVFPPSNTPGVSHFPPGYKQDRIVGMGMNEEELKRNPVL-TEYVVQDLNLNPK--LPFEDNSFDVITNV 205 (299)
Q Consensus 129 ~~~~~l~~~~~~vLDiGcG~G~~~~~~~~~~~~v~gvD~S~~ml~~a~~~-~~~~~~D~~~~~~--lpf~~~~FD~Vis~ 205 (299)
.+++.+.....+|||+|||+|.........+.+++|+|+|+.|++.++++ .+++.+|+ .. +++++++||+|++.
T Consensus 24 ~l~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~d~---~~~~~~~~~~~fD~v~~~ 100 (230)
T 3cc8_A 24 NLLKHIKKEWKEVLDIGCSSGALGAAIKENGTRVSGIEAFPEAAEQAKEKLDHVVLGDI---ETMDMPYEEEQFDCVIFG 100 (230)
T ss_dssp HHHTTCCTTCSEEEEETCTTSHHHHHHHTTTCEEEEEESSHHHHHHHHTTSSEEEESCT---TTCCCCSCTTCEEEEEEE
T ss_pred HHHHHhccCCCcEEEeCCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHHhCCcEEEcch---hhcCCCCCCCccCEEEEC
Confidence 33443334457899999999973322221258999999999999988875 57888998 54 67888999999999
Q ss_pred ccccccCCHHHHHHHHHhhccCCcEEEEEecCcchHHHHHHh----hhhcC----CCchh-----hhHHHHHHHhCCCCC
Q 022305 206 VSVDYLTKPIEVFKEMCQVLKPGGLAIVSFSNRCFWTKAISI----WTSTG----DADHV-----MIVGAYFHYAGGYEP 272 (299)
Q Consensus 206 ~~l~~~~d~~~~l~ei~rvLkpGG~lii~~~~~~~~~~~~~~----~~~~~----~~~~~-----~~~~~~~~~~aGF~~ 272 (299)
.+++|++++..+++++.++|||||.+++.+++...+...... |.... ...|. ..+.+.+ ..+||+.
T Consensus 101 ~~l~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gf~~ 179 (230)
T 3cc8_A 101 DVLEHLFDPWAVIEKVKPYIKQNGVILASIPNVSHISVLAPLLAGNWTYTEYGLLDKTHIRFFTFNEMLRMF-LKAGYSI 179 (230)
T ss_dssp SCGGGSSCHHHHHHHTGGGEEEEEEEEEEEECTTSHHHHHHHHTTCCCCBSSSTTBTTCCCCCCHHHHHHHH-HHTTEEE
T ss_pred ChhhhcCCHHHHHHHHHHHcCCCCEEEEEeCCcchHHHHHHHhcCCceeccCCCCCcceEEEecHHHHHHHH-HHcCCeE
Confidence 999999999999999999999999999999886655443322 21110 01111 1222233 5699999
Q ss_pred CeeeecCCC
Q 022305 273 PQAVDISPN 281 (299)
Q Consensus 273 v~~~~~~~~ 281 (299)
+++..+...
T Consensus 180 ~~~~~~~~~ 188 (230)
T 3cc8_A 180 SKVDRVYVD 188 (230)
T ss_dssp EEEEEEECC
T ss_pred EEEEecccC
Confidence 988887543
No 20
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.71 E-value=4.8e-18 Score=151.96 Aligned_cols=154 Identities=10% Similarity=0.111 Sum_probs=100.3
Q ss_pred CceeeccCcCCccccCCCCCC-CeEEEEeCCHHHHHhcCCC-------------------------------------C-
Q 022305 139 SEVFPPSNTPGVSHFPPGYKQ-DRIVGMGMNEEELKRNPVL-------------------------------------T- 179 (299)
Q Consensus 139 ~~vLDiGcG~G~~~~~~~~~~-~~v~gvD~S~~ml~~a~~~-------------------------------------~- 179 (299)
.+|||+|||+|.........+ .+|+|+|+|+.|++.+++. +
T Consensus 57 ~~vLDiGCG~G~~~~~~~~~~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 136 (263)
T 2a14_A 57 DTLIDIGSGPTIYQVLAACDSFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKLRAAVK 136 (263)
T ss_dssp EEEEESSCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHHHHHEE
T ss_pred ceEEEeCCCccHHHHHHHHhhhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHHHhhhh
Confidence 579999999996444433344 4799999999999966531 1
Q ss_pred cEEEeccCCCCC-CCC---CCCCeeEEEeccccccc----CCHHHHHHHHHhhccCCcEEEEEecC-cchHHHHHHhhhh
Q 022305 180 EYVVQDLNLNPK-LPF---EDNSFDVITNVVSVDYL----TKPIEVFKEMCQVLKPGGLAIVSFSN-RCFWTKAISIWTS 250 (299)
Q Consensus 180 ~~~~~D~~~~~~-lpf---~~~~FD~Vis~~~l~~~----~d~~~~l~ei~rvLkpGG~lii~~~~-~~~~~~~~~~~~~ 250 (299)
+++++|+ .+ .|+ .+++||+|+++.++||+ ++...++++++|+|||||.|+++... ...+...-..+..
T Consensus 137 ~~~~~D~---~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~~~~~~~~~g~~~~~~ 213 (263)
T 2a14_A 137 RVLKCDV---HLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTVTLRLPSYMVGKREFSC 213 (263)
T ss_dssp EEEECCT---TSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEEETTEEEEC
T ss_pred eEEeccc---cCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEeecCccceeCCeEeec
Confidence 2788998 44 344 36799999999999996 35578999999999999999998532 1111000000000
Q ss_pred cCCCchhhhHHHHHHHhCCCCCCeeeecCCCC----CCCCCeEEEEEEecCC
Q 022305 251 TGDADHVMIVGAYFHYAGGYEPPQAVDISPNP----GRSDPMYVVYSRKAST 298 (299)
Q Consensus 251 ~~~~~~~~~~~~~~~~~aGF~~v~~~~~~~~~----~~~~p~~~v~arK~~~ 298 (299)
..-....+...+ .++||+.+++....... ....++++++|||+.+
T Consensus 214 --~~~~~~~l~~~l-~~aGF~i~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~ 262 (263)
T 2a14_A 214 --VALEKGEVEQAV-LDAGFDIEQLLHSPQSYSVTNAANNGVCCIVARKKPG 262 (263)
T ss_dssp --CCCCHHHHHHHH-HHTTEEEEEEEEECCCCCTTTCCCCCEEEEEEEECC-
T ss_pred --cccCHHHHHHHH-HHCCCEEEEEeecccccccccCCCCceEEEEEEecCC
Confidence 000111223333 56999998887754221 2234788999999754
No 21
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.71 E-value=8.6e-18 Score=148.76 Aligned_cols=98 Identities=18% Similarity=0.189 Sum_probs=83.8
Q ss_pred cCCceeeccCcCCccccCCCCCCCeEEEEeCCHHHHHhcCC-------CCcEEEeccCCCCCCCCCCCCeeEEEeccccc
Q 022305 137 YYSEVFPPSNTPGVSHFPPGYKQDRIVGMGMNEEELKRNPV-------LTEYVVQDLNLNPKLPFEDNSFDVITNVVSVD 209 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~~~~~~~~~~~v~gvD~S~~ml~~a~~-------~~~~~~~D~~~~~~lpf~~~~FD~Vis~~~l~ 209 (299)
...+|||+|||+|.........+.+++|+|+|+.|++.+++ +++++++|+ +.+++++++||+|++..+++
T Consensus 39 ~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~---~~~~~~~~~fD~v~~~~~l~ 115 (263)
T 2yqz_A 39 EEPVFLELGVGTGRIALPLIARGYRYIALDADAAMLEVFRQKIAGVDRKVQVVQADA---RAIPLPDESVHGVIVVHLWH 115 (263)
T ss_dssp SCCEEEEETCTTSTTHHHHHTTTCEEEEEESCHHHHHHHHHHTTTSCTTEEEEESCT---TSCCSCTTCEEEEEEESCGG
T ss_pred CCCEEEEeCCcCCHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEccc---ccCCCCCCCeeEEEECCchh
Confidence 35689999999997444333336899999999999987643 478999999 88899999999999999999
Q ss_pred ccCCHHHHHHHHHhhccCCcEEEEEecC
Q 022305 210 YLTKPIEVFKEMCQVLKPGGLAIVSFSN 237 (299)
Q Consensus 210 ~~~d~~~~l~ei~rvLkpGG~lii~~~~ 237 (299)
|++|+..+++++.|+|||||.+++.++.
T Consensus 116 ~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 143 (263)
T 2yqz_A 116 LVPDWPKVLAEAIRVLKPGGALLEGWDQ 143 (263)
T ss_dssp GCTTHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred hcCCHHHHHHHHHHHCCCCcEEEEEecC
Confidence 9999999999999999999999887544
No 22
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.71 E-value=1.2e-17 Score=152.20 Aligned_cols=152 Identities=19% Similarity=0.134 Sum_probs=107.0
Q ss_pred hcCCceeeccCcCCccccC---CCCCCCeEEEEeCCHHHHHhcCCC---------CcEEEeccCCCCCCCCCCCCeeEEE
Q 022305 136 KYYSEVFPPSNTPGVSHFP---PGYKQDRIVGMGMNEEELKRNPVL---------TEYVVQDLNLNPKLPFEDNSFDVIT 203 (299)
Q Consensus 136 ~~~~~vLDiGcG~G~~~~~---~~~~~~~v~gvD~S~~ml~~a~~~---------~~~~~~D~~~~~~lpf~~~~FD~Vi 203 (299)
+...+|||+|||+|..... ...++.+|+|+|+|+.|++.++++ ++++++|+ ..++++ ++||+|+
T Consensus 117 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~---~~~~~~-~~fD~v~ 192 (305)
T 3ocj_A 117 RPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDA---WKLDTR-EGYDLLT 192 (305)
T ss_dssp CTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCG---GGCCCC-SCEEEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECch---hcCCcc-CCeEEEE
Confidence 3456899999999973333 345678999999999999877642 78999999 788887 9999999
Q ss_pred ecccccccCCHHH---HHHHHHhhccCCcEEEEEecCcchHHHHHHh-----------------hhhc-CC-C---chhh
Q 022305 204 NVVSVDYLTKPIE---VFKEMCQVLKPGGLAIVSFSNRCFWTKAISI-----------------WTST-GD-A---DHVM 258 (299)
Q Consensus 204 s~~~l~~~~d~~~---~l~ei~rvLkpGG~lii~~~~~~~~~~~~~~-----------------~~~~-~~-~---~~~~ 258 (299)
++.+++|++++.. +++++.++|||||.+++.............. +... .. . ....
T Consensus 193 ~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (305)
T 3ocj_A 193 SNGLNIYEPDDARVTELYRRFWQALKPGGALVTSFLTPPPALSPDSPWDMQAIDPHDLQLQQLVFTRLIQPRWNALRTHA 272 (305)
T ss_dssp CCSSGGGCCCHHHHHHHHHHHHHHEEEEEEEEEECCCCCTTTCTTCCCCGGGSCHHHHHHHHHHHHHTTCCSCCCCCCHH
T ss_pred ECChhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCCcccccccceeeccccchhhhhhhHHHHHHhhhhhccCCHH
Confidence 9999999998876 7999999999999999986432110000000 1111 11 1 1122
Q ss_pred hHHHHHHHhCCCCCCeeeecCCCCCCCCCeEEEEEEecC
Q 022305 259 IVGAYFHYAGGYEPPQAVDISPNPGRSDPMYVVYSRKAS 297 (299)
Q Consensus 259 ~~~~~~~~~aGF~~v~~~~~~~~~~~~~p~~~v~arK~~ 297 (299)
.+.+.+ +.+||+.+++.... ...+..++|+|++
T Consensus 273 ~~~~~l-~~aGF~~v~~~~~~-----~~~~~~v~a~Kpa 305 (305)
T 3ocj_A 273 QTRAQL-EEAGFTDLRFEDDR-----ARLFPTVIARKPA 305 (305)
T ss_dssp HHHHHH-HHTTCEEEEEECCT-----TSSSCEEEEECCC
T ss_pred HHHHHH-HHCCCEEEEEEccc-----CceeeEEEEecCC
Confidence 233333 56999998887622 2455688999974
No 23
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.71 E-value=4.4e-18 Score=146.83 Aligned_cols=162 Identities=11% Similarity=0.075 Sum_probs=110.0
Q ss_pred HHHHhh-hcCCceeeccCcCCccccCCCCCCCeEEEEeCCHHHHHhcCCC--CcEEEeccCCCCCC---CCCC-CCeeEE
Q 022305 130 AIAALT-KYYSEVFPPSNTPGVSHFPPGYKQDRIVGMGMNEEELKRNPVL--TEYVVQDLNLNPKL---PFED-NSFDVI 202 (299)
Q Consensus 130 ~~~~l~-~~~~~vLDiGcG~G~~~~~~~~~~~~v~gvD~S~~ml~~a~~~--~~~~~~D~~~~~~l---pf~~-~~FD~V 202 (299)
+++.+. ....+|||+|||+|.........+.+++|+|+|+.|++.++++ +++...|+ ..+ ++.. ++||+|
T Consensus 44 ~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~---~~~~~~~~~~~~~fD~v 120 (227)
T 3e8s_A 44 ILLAILGRQPERVLDLGCGEGWLLRALADRGIEAVGVDGDRTLVDAARAAGAGEVHLASY---AQLAEAKVPVGKDYDLI 120 (227)
T ss_dssp HHHHHHHTCCSEEEEETCTTCHHHHHHHTTTCEEEEEESCHHHHHHHHHTCSSCEEECCH---HHHHTTCSCCCCCEEEE
T ss_pred HHHHhhcCCCCEEEEeCCCCCHHHHHHHHCCCEEEEEcCCHHHHHHHHHhcccccchhhH---HhhcccccccCCCccEE
Confidence 344442 3457999999999974433333377999999999999987764 77888887 454 5444 459999
Q ss_pred EecccccccCCHHHHHHHHHhhccCCcEEEEEecCcchHHH--HHHhh-----hhcCC---Cc--h---hhhHHHHHHHh
Q 022305 203 TNVVSVDYLTKPIEVFKEMCQVLKPGGLAIVSFSNRCFWTK--AISIW-----TSTGD---AD--H---VMIVGAYFHYA 267 (299)
Q Consensus 203 is~~~l~~~~d~~~~l~ei~rvLkpGG~lii~~~~~~~~~~--~~~~~-----~~~~~---~~--~---~~~~~~~~~~~ 267 (299)
++..+++ ..++..+++++.++|||||.+++..++...... ....| ..... .. + ..-+.+.+ +.
T Consensus 121 ~~~~~l~-~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~ 198 (227)
T 3e8s_A 121 CANFALL-HQDIIELLSAMRTLLVPGGALVIQTLHPWSVADGDYQDGWREESFAGFAGDWQPMPWYFRTLASWLNAL-DM 198 (227)
T ss_dssp EEESCCC-SSCCHHHHHHHHHTEEEEEEEEEEECCTTTTCTTCCSCEEEEECCTTSSSCCCCEEEEECCHHHHHHHH-HH
T ss_pred EECchhh-hhhHHHHHHHHHHHhCCCeEEEEEecCccccCccccccccchhhhhccccCcccceEEEecHHHHHHHH-HH
Confidence 9999999 889999999999999999999998876432211 01111 11110 01 1 11222233 66
Q ss_pred CCCCCCeeeecCCCCCCCCCeEEEEEEec
Q 022305 268 GGYEPPQAVDISPNPGRSDPMYVVYSRKA 296 (299)
Q Consensus 268 aGF~~v~~~~~~~~~~~~~p~~~v~arK~ 296 (299)
+||+.+++............-+++++||+
T Consensus 199 aGf~~~~~~~~~~~~~~~~~~~~~va~k~ 227 (227)
T 3e8s_A 199 AGLRLVSLQEPQHPQSAVPQSLLMVAERH 227 (227)
T ss_dssp TTEEEEEEECCCCTTCSSCSCEEEEEEEC
T ss_pred cCCeEEEEecCCCCCCCCceeEEEEeecC
Confidence 99999988774443333345688888885
No 24
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.71 E-value=6.5e-18 Score=146.72 Aligned_cols=99 Identities=22% Similarity=0.339 Sum_probs=83.4
Q ss_pred hcCCceeeccCcCCccccCCCCCCCeEEEEeCCHHHHHhcCC-------------CCcEEEeccCCCCCCCCCCCCeeEE
Q 022305 136 KYYSEVFPPSNTPGVSHFPPGYKQDRIVGMGMNEEELKRNPV-------------LTEYVVQDLNLNPKLPFEDNSFDVI 202 (299)
Q Consensus 136 ~~~~~vLDiGcG~G~~~~~~~~~~~~v~gvD~S~~ml~~a~~-------------~~~~~~~D~~~~~~lpf~~~~FD~V 202 (299)
+...+|||+|||+|.........+.+++|+|+|+.|++.+++ +++++.+|+ ..+++++++||+|
T Consensus 29 ~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~---~~~~~~~~~~D~v 105 (235)
T 3sm3_A 29 QEDDEILDIGCGSGKISLELASKGYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENA---SSLSFHDSSFDFA 105 (235)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCT---TSCCSCTTCEEEE
T ss_pred CCCCeEEEECCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecc---cccCCCCCceeEE
Confidence 345799999999997433333337799999999999987665 257889999 8889989999999
Q ss_pred EecccccccCCHH---HHHHHHHhhccCCcEEEEEecC
Q 022305 203 TNVVSVDYLTKPI---EVFKEMCQVLKPGGLAIVSFSN 237 (299)
Q Consensus 203 is~~~l~~~~d~~---~~l~ei~rvLkpGG~lii~~~~ 237 (299)
++..+++|++++. .+++++.++|||||.+++...+
T Consensus 106 ~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 143 (235)
T 3sm3_A 106 VMQAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEFG 143 (235)
T ss_dssp EEESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEEB
T ss_pred EEcchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEECC
Confidence 9999999999988 9999999999999999887654
No 25
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.70 E-value=1.8e-17 Score=147.90 Aligned_cols=141 Identities=17% Similarity=0.143 Sum_probs=104.0
Q ss_pred cCCceeeccCcCCccccC-CCCCCCeEEEEeCCHHHHHhcCC---------CCcEEEeccCCCCCCCCCCCCeeEEEecc
Q 022305 137 YYSEVFPPSNTPGVSHFP-PGYKQDRIVGMGMNEEELKRNPV---------LTEYVVQDLNLNPKLPFEDNSFDVITNVV 206 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~~~~-~~~~~~~v~gvD~S~~ml~~a~~---------~~~~~~~D~~~~~~lpf~~~~FD~Vis~~ 206 (299)
...+|||+|||+|..... ...+..+|+|+|+|+.|++.+++ +++++++|+ ..+++++++||+|++..
T Consensus 46 ~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~---~~~~~~~~~fD~i~~~~ 122 (267)
T 3kkz_A 46 EKSLIADIGCGTGGQTMVLAGHVTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSM---DDLPFRNEELDLIWSEG 122 (267)
T ss_dssp TTCEEEEETCTTCHHHHHHHTTCSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCT---TSCCCCTTCEEEEEESS
T ss_pred CCCEEEEeCCCCCHHHHHHHhccCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcCh---hhCCCCCCCEEEEEEcC
Confidence 346899999999973322 12256799999999999987654 278999999 88999899999999999
Q ss_pred cccccCCHHHHHHHHHhhccCCcEEEEEecC---cchHHHHHHhhhhcC-CCchhhhHHHHHHHhCCCCCCeeeecCCCC
Q 022305 207 SVDYLTKPIEVFKEMCQVLKPGGLAIVSFSN---RCFWTKAISIWTSTG-DADHVMIVGAYFHYAGGYEPPQAVDISPNP 282 (299)
Q Consensus 207 ~l~~~~d~~~~l~ei~rvLkpGG~lii~~~~---~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~aGF~~v~~~~~~~~~ 282 (299)
+++|+ ++..+++++.++|||||.+++..+. ..........|.... .......+.+.+ +++||+.+++..++...
T Consensus 123 ~~~~~-~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~aGf~~v~~~~~~~~~ 200 (267)
T 3kkz_A 123 AIYNI-GFERGLNEWRKYLKKGGYLAVSECSWFTDERPAEINDFWMDAYPEIDTIPNQVAKI-HKAGYLPVATFILPENC 200 (267)
T ss_dssp CGGGT-CHHHHHHHHGGGEEEEEEEEEEEEEESSSCCCHHHHHHHHHHCTTCEEHHHHHHHH-HHTTEEEEEEEECCGGG
T ss_pred Cceec-CHHHHHHHHHHHcCCCCEEEEEEeeecCCCChHHHHHHHHHhCCCCCCHHHHHHHH-HHCCCEEEEEEECCHhH
Confidence 99999 8999999999999999999887643 222333344453222 222222333333 56999999998876443
No 26
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.70 E-value=1.3e-17 Score=149.86 Aligned_cols=109 Identities=13% Similarity=0.206 Sum_probs=89.9
Q ss_pred cHHHHHHhh-hcCCceeeccCcCCccccCCCCCCCeEEEEeCCHHHHHhcCC---CCcEEEeccCCCCCCCCCCCCeeEE
Q 022305 127 DDPAIAALT-KYYSEVFPPSNTPGVSHFPPGYKQDRIVGMGMNEEELKRNPV---LTEYVVQDLNLNPKLPFEDNSFDVI 202 (299)
Q Consensus 127 ~~~~~~~l~-~~~~~vLDiGcG~G~~~~~~~~~~~~v~gvD~S~~ml~~a~~---~~~~~~~D~~~~~~lpf~~~~FD~V 202 (299)
.+.+++.+. ....+|||+|||+|........++.+|+|+|+|+.|++.+++ +++++++|+ +.+++ +++||+|
T Consensus 46 ~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~---~~~~~-~~~fD~v 121 (279)
T 3ccf_A 46 GEDLLQLLNPQPGEFILDLGCGTGQLTEKIAQSGAEVLGTDNAATMIEKARQNYPHLHFDVADA---RNFRV-DKPLDAV 121 (279)
T ss_dssp CCHHHHHHCCCTTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTSCEEECCT---TTCCC-SSCEEEE
T ss_pred HHHHHHHhCCCCCCEEEEecCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHhhCCCCEEEECCh---hhCCc-CCCcCEE
Confidence 344455553 345789999999997433332267899999999999998775 489999999 78887 5789999
Q ss_pred EecccccccCCHHHHHHHHHhhccCCcEEEEEecCcc
Q 022305 203 TNVVSVDYLTKPIEVFKEMCQVLKPGGLAIVSFSNRC 239 (299)
Q Consensus 203 is~~~l~~~~d~~~~l~ei~rvLkpGG~lii~~~~~~ 239 (299)
++..+++|++|+..+++++.|+|||||.+++.+++..
T Consensus 122 ~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~~~~~~~~ 158 (279)
T 3ccf_A 122 FSNAMLHWVKEPEAAIASIHQALKSGGRFVAEFGGKG 158 (279)
T ss_dssp EEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECTT
T ss_pred EEcchhhhCcCHHHHHHHHHHhcCCCcEEEEEecCCc
Confidence 9999999999999999999999999999999887643
No 27
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.70 E-value=1.6e-17 Score=146.15 Aligned_cols=105 Identities=18% Similarity=0.237 Sum_probs=85.8
Q ss_pred HHHHh-hhcCCceeeccCcCCccccCCCCCCCeEEEEeCCHHHHHhcCC--------CCcEEEeccCCCCCCCCCCCCee
Q 022305 130 AIAAL-TKYYSEVFPPSNTPGVSHFPPGYKQDRIVGMGMNEEELKRNPV--------LTEYVVQDLNLNPKLPFEDNSFD 200 (299)
Q Consensus 130 ~~~~l-~~~~~~vLDiGcG~G~~~~~~~~~~~~v~gvD~S~~ml~~a~~--------~~~~~~~D~~~~~~lpf~~~~FD 200 (299)
.++.+ .+...+|||+|||+|...........+++|+|+|+.|++.+++ +++++++|+ +.+++++++||
T Consensus 13 ~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~---~~~~~~~~~fD 89 (239)
T 1xxl_A 13 MIKTAECRAEHRVLDIGAGAGHTALAFSPYVQECIGVDATKEMVEVASSFAQEKGVENVRFQQGTA---ESLPFPDDSFD 89 (239)
T ss_dssp HHHHHTCCTTCEEEEESCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBT---TBCCSCTTCEE
T ss_pred HHHHhCcCCCCEEEEEccCcCHHHHHHHHhCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEeccc---ccCCCCCCcEE
Confidence 34444 2345789999999997333332234699999999999987654 378899999 88999999999
Q ss_pred EEEecccccccCCHHHHHHHHHhhccCCcEEEEEecC
Q 022305 201 VITNVVSVDYLTKPIEVFKEMCQVLKPGGLAIVSFSN 237 (299)
Q Consensus 201 ~Vis~~~l~~~~d~~~~l~ei~rvLkpGG~lii~~~~ 237 (299)
+|++..+++|++|+..+++++.|+|||||.+++....
T Consensus 90 ~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 126 (239)
T 1xxl_A 90 IITCRYAAHHFSDVRKAVREVARVLKQDGRFLLVDHY 126 (239)
T ss_dssp EEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred EEEECCchhhccCHHHHHHHHHHHcCCCcEEEEEEcC
Confidence 9999999999999999999999999999998886443
No 28
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.70 E-value=3.1e-17 Score=144.14 Aligned_cols=148 Identities=15% Similarity=0.078 Sum_probs=104.3
Q ss_pred CCceeeccCcCCccccCCC-CCCCeEEEEeCCHHHHHhcCCC--------CcEEEeccCCCCCCCCCCCCeeEEEecccc
Q 022305 138 YSEVFPPSNTPGVSHFPPG-YKQDRIVGMGMNEEELKRNPVL--------TEYVVQDLNLNPKLPFEDNSFDVITNVVSV 208 (299)
Q Consensus 138 ~~~vLDiGcG~G~~~~~~~-~~~~~v~gvD~S~~ml~~a~~~--------~~~~~~D~~~~~~lpf~~~~FD~Vis~~~l 208 (299)
..+|||+|||+|....... ....+++|+|+|+.|++.++++ ++++.+|+ ..+++++++||+|++..++
T Consensus 80 ~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~---~~~~~~~~~fD~v~~~~~l 156 (241)
T 2ex4_A 80 TSCALDCGAGIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGL---QDFTPEPDSYDVIWIQWVI 156 (241)
T ss_dssp CSEEEEETCTTTHHHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCG---GGCCCCSSCEEEEEEESCG
T ss_pred CCEEEEECCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcCh---hhcCCCCCCEEEEEEcchh
Confidence 5689999999997433222 2256999999999999877542 57889998 7888888899999999999
Q ss_pred cccCCHH--HHHHHHHhhccCCcEEEEEecCcchHHHHHHhhhhcCCCc--hhhhHHHHHHHhCCCCCCeeeecCCCCCC
Q 022305 209 DYLTKPI--EVFKEMCQVLKPGGLAIVSFSNRCFWTKAISIWTSTGDAD--HVMIVGAYFHYAGGYEPPQAVDISPNPGR 284 (299)
Q Consensus 209 ~~~~d~~--~~l~ei~rvLkpGG~lii~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~aGF~~v~~~~~~~~~~~ 284 (299)
+|++++. .+++++.++|||||.+++..+.... ...|....... ....+.+.+ ..+||+.+++.....-+..
T Consensus 157 ~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~----~~~~~~~~~~~~~~~~~~~~~l-~~aGf~~~~~~~~~~~~~~ 231 (241)
T 2ex4_A 157 GHLTDQHLAEFLRRCKGSLRPNGIIVIKDNMAQE----GVILDDVDSSVCRDLDVVRRII-CSAGLSLLAEERQENLPDE 231 (241)
T ss_dssp GGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEBSS----SEEEETTTTEEEEBHHHHHHHH-HHTTCCEEEEEECCSCCTT
T ss_pred hhCCHHHHHHHHHHHHHhcCCCeEEEEEEccCCC----cceecccCCcccCCHHHHHHHH-HHcCCeEEEeeecCCCcch
Confidence 9998854 8999999999999999987543221 00111111100 122233334 5699999998887665555
Q ss_pred CCCeEEEEE
Q 022305 285 SDPMYVVYS 293 (299)
Q Consensus 285 ~~p~~~v~a 293 (299)
..|..+.+.
T Consensus 232 ~~~v~~~~l 240 (241)
T 2ex4_A 232 IYHVYSFAL 240 (241)
T ss_dssp SCEEEEEEE
T ss_pred hhhhhhhee
Confidence 556655443
No 29
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.70 E-value=1.2e-17 Score=140.64 Aligned_cols=150 Identities=15% Similarity=0.118 Sum_probs=110.8
Q ss_pred HHHHHhhhcCCceeeccCcCCccccCCCCCCCeEEEEeCCHHHHHhcCC---CCcEEEeccCCCCCCCCCCCCeeEEEec
Q 022305 129 PAIAALTKYYSEVFPPSNTPGVSHFPPGYKQDRIVGMGMNEEELKRNPV---LTEYVVQDLNLNPKLPFEDNSFDVITNV 205 (299)
Q Consensus 129 ~~~~~l~~~~~~vLDiGcG~G~~~~~~~~~~~~v~gvD~S~~ml~~a~~---~~~~~~~D~~~~~~lpf~~~~FD~Vis~ 205 (299)
.++..+.+...+|||+|||+|.........+.+++|+|+|+.+++.+++ +++++.+|+ ..+++++++||+|++.
T Consensus 38 ~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~d~---~~~~~~~~~~D~i~~~ 114 (195)
T 3cgg_A 38 RLIDAMAPRGAKILDAGCGQGRIGGYLSKQGHDVLGTDLDPILIDYAKQDFPEARWVVGDL---SVDQISETDFDLIVSA 114 (195)
T ss_dssp HHHHHHSCTTCEEEEETCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTSEEEECCT---TTSCCCCCCEEEEEEC
T ss_pred HHHHHhccCCCeEEEECCCCCHHHHHHHHCCCcEEEEcCCHHHHHHHHHhCCCCcEEEccc---ccCCCCCCceeEEEEC
Confidence 3455555566799999999996333222236799999999999988765 378999999 7788888999999998
Q ss_pred -ccccccC--CHHHHHHHHHhhccCCcEEEEEecCcchHHHHHHhhhhcCCCchhhhHHHHHHHhCCCCCCeeeecCC-C
Q 022305 206 -VSVDYLT--KPIEVFKEMCQVLKPGGLAIVSFSNRCFWTKAISIWTSTGDADHVMIVGAYFHYAGGYEPPQAVDISP-N 281 (299)
Q Consensus 206 -~~l~~~~--d~~~~l~ei~rvLkpGG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aGF~~v~~~~~~~-~ 281 (299)
.+++|+. +...+++++.++|||||.+++.+++... .....+...+ ..+||+.+++..... .
T Consensus 115 ~~~~~~~~~~~~~~~l~~~~~~l~~~G~l~~~~~~~~~--------------~~~~~~~~~l-~~~Gf~~~~~~~~~~~~ 179 (195)
T 3cgg_A 115 GNVMGFLAEDGREPALANIHRALGADGRAVIGFGAGRG--------------WVFGDFLEVA-ERVGLELENAFESWDLK 179 (195)
T ss_dssp CCCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEETTSS--------------CCHHHHHHHH-HHHTEEEEEEESSTTCC
T ss_pred CcHHhhcChHHHHHHHHHHHHHhCCCCEEEEEeCCCCC--------------cCHHHHHHHH-HHcCCEEeeeecccccC
Confidence 7888884 5589999999999999999998765321 1112223333 458899887765522 2
Q ss_pred C-CCCCCeEEEEEEec
Q 022305 282 P-GRSDPMYVVYSRKA 296 (299)
Q Consensus 282 ~-~~~~p~~~v~arK~ 296 (299)
+ ....+++++++||+
T Consensus 180 ~~~~~~~~~~~v~~k~ 195 (195)
T 3cgg_A 180 PFVQGSEFLVAVFTKK 195 (195)
T ss_dssp BCCTTCSEEEEEEEEC
T ss_pred cCCCCCcEEEEEEecC
Confidence 2 34578899999985
No 30
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.69 E-value=3.3e-17 Score=142.92 Aligned_cols=97 Identities=20% Similarity=0.324 Sum_probs=81.4
Q ss_pred cCCceeeccCcCCc--cccCCCCCCCeEEEEeCCHHHHHhcCC------CCcEEEeccCCCCCCCCCCCCeeEEEecccc
Q 022305 137 YYSEVFPPSNTPGV--SHFPPGYKQDRIVGMGMNEEELKRNPV------LTEYVVQDLNLNPKLPFEDNSFDVITNVVSV 208 (299)
Q Consensus 137 ~~~~vLDiGcG~G~--~~~~~~~~~~~v~gvD~S~~ml~~a~~------~~~~~~~D~~~~~~lpf~~~~FD~Vis~~~l 208 (299)
...+|||+|||+|. ..+....++.+++|+|+|+.|++.+++ +++++++|+ ..++++ ++||+|++..++
T Consensus 44 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~---~~~~~~-~~fD~v~~~~~l 119 (234)
T 3dtn_A 44 ENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGNLKVKYIEADY---SKYDFE-EKYDMVVSALSI 119 (234)
T ss_dssp SSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSCTTEEEEESCT---TTCCCC-SCEEEEEEESCG
T ss_pred CCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccCCCEEEEeCch---hccCCC-CCceEEEEeCcc
Confidence 34689999999996 233334457899999999999987765 378999999 888887 899999999999
Q ss_pred cccCCHH--HHHHHHHhhccCCcEEEEEecC
Q 022305 209 DYLTKPI--EVFKEMCQVLKPGGLAIVSFSN 237 (299)
Q Consensus 209 ~~~~d~~--~~l~ei~rvLkpGG~lii~~~~ 237 (299)
+|++++. .+++++.|+|||||.+++....
T Consensus 120 ~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 150 (234)
T 3dtn_A 120 HHLEDEDKKELYKRSYSILKESGIFINADLV 150 (234)
T ss_dssp GGSCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred ccCCHHHHHHHHHHHHHhcCCCcEEEEEEec
Confidence 9998776 5999999999999999887644
No 31
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.69 E-value=1.4e-17 Score=147.22 Aligned_cols=139 Identities=14% Similarity=0.153 Sum_probs=102.6
Q ss_pred CCceeeccCcCCcccc--CCCCCCCeEEEEeCCHHHHHhcCCC---------CcEEEeccCCCCCCCCCCCCeeEEEecc
Q 022305 138 YSEVFPPSNTPGVSHF--PPGYKQDRIVGMGMNEEELKRNPVL---------TEYVVQDLNLNPKLPFEDNSFDVITNVV 206 (299)
Q Consensus 138 ~~~vLDiGcG~G~~~~--~~~~~~~~v~gvD~S~~ml~~a~~~---------~~~~~~D~~~~~~lpf~~~~FD~Vis~~ 206 (299)
..+|||+|||+|.... .... ..+|+|+|+|+.|++.++++ ++++++|+ ..+|+++++||+|++..
T Consensus 47 ~~~vLDiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~---~~~~~~~~~fD~v~~~~ 122 (257)
T 3f4k_A 47 DAKIADIGCGTGGQTLFLADYV-KGQITGIDLFPDFIEIFNENAVKANCADRVKGITGSM---DNLPFQNEELDLIWSEG 122 (257)
T ss_dssp TCEEEEETCTTSHHHHHHHHHC-CSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCT---TSCSSCTTCEEEEEEES
T ss_pred CCeEEEeCCCCCHHHHHHHHhC-CCeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECCh---hhCCCCCCCEEEEEecC
Confidence 3589999999996332 2222 24999999999999976552 78999999 88999999999999999
Q ss_pred cccccCCHHHHHHHHHhhccCCcEEEEEecC---cchHHHHHHhhhhcCC-CchhhhHHHHHHHhCCCCCCeeeecCCCC
Q 022305 207 SVDYLTKPIEVFKEMCQVLKPGGLAIVSFSN---RCFWTKAISIWTSTGD-ADHVMIVGAYFHYAGGYEPPQAVDISPNP 282 (299)
Q Consensus 207 ~l~~~~d~~~~l~ei~rvLkpGG~lii~~~~---~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~aGF~~v~~~~~~~~~ 282 (299)
+++|+ ++..+++++.++|||||.+++..++ ..........|..... .....-+.+.+ +++||+.+++..++...
T Consensus 123 ~l~~~-~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~aGf~~v~~~~~~~~~ 200 (257)
T 3f4k_A 123 AIYNI-GFERGMNEWSKYLKKGGFIAVSEASWFTSERPAEIEDFWMDAYPEISVIPTCIDKM-ERAGYTPTAHFILPENC 200 (257)
T ss_dssp CSCCC-CHHHHHHHHHTTEEEEEEEEEEEEEESSSCCCHHHHHHHHHHCTTCCBHHHHHHHH-HHTTEEEEEEEECCGGG
T ss_pred hHhhc-CHHHHHHHHHHHcCCCcEEEEEEeeccCCCChHHHHHHHHHhCCCCCCHHHHHHHH-HHCCCeEEEEEECChhh
Confidence 99999 8999999999999999999988643 2223333444543221 11222233333 56999999988776544
No 32
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.69 E-value=2.2e-17 Score=147.30 Aligned_cols=139 Identities=19% Similarity=0.229 Sum_probs=99.8
Q ss_pred cCCceeeccCcCCccccCC-CCCCCeEEEEeCCHHHHHhcCC---------CCcEEEeccCCCCCCCCCCCCeeEEEecc
Q 022305 137 YYSEVFPPSNTPGVSHFPP-GYKQDRIVGMGMNEEELKRNPV---------LTEYVVQDLNLNPKLPFEDNSFDVITNVV 206 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~~~~~-~~~~~~v~gvD~S~~ml~~a~~---------~~~~~~~D~~~~~~lpf~~~~FD~Vis~~ 206 (299)
...+|||+|||+|...... ...+.+|+|+|+|+.|++.+++ +++++.+|+ ..+|+++++||+|++..
T Consensus 61 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~---~~~~~~~~~fD~v~~~~ 137 (273)
T 3bus_A 61 SGDRVLDVGCGIGKPAVRLATARDVRVTGISISRPQVNQANARATAAGLANRVTFSYADA---MDLPFEDASFDAVWALE 137 (273)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHSCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCT---TSCCSCTTCEEEEEEES
T ss_pred CCCEEEEeCCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECcc---ccCCCCCCCccEEEEec
Confidence 4568999999999632221 1126899999999999987654 378999999 88999999999999999
Q ss_pred cccccCCHHHHHHHHHhhccCCcEEEEEecCc-----chHHHHHHhhh-h--cCCCchhhhHHHHHHHhCCCCCCeeeec
Q 022305 207 SVDYLTKPIEVFKEMCQVLKPGGLAIVSFSNR-----CFWTKAISIWT-S--TGDADHVMIVGAYFHYAGGYEPPQAVDI 278 (299)
Q Consensus 207 ~l~~~~d~~~~l~ei~rvLkpGG~lii~~~~~-----~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~aGF~~v~~~~~ 278 (299)
+++|++++..+|+++.|+|||||.+++..... .........+. . .........+.+.+ +.+||+.+++..+
T Consensus 138 ~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~aGf~~~~~~~~ 216 (273)
T 3bus_A 138 SLHHMPDRGRALREMARVLRPGGTVAIADFVLLAPVEGAKKEAVDAFRAGGGVLSLGGIDEYESDV-RQAELVVTSTVDI 216 (273)
T ss_dssp CTTTSSCHHHHHHHHHTTEEEEEEEEEEEEEESSCCCHHHHHHHHHHHHHHTCCCCCCHHHHHHHH-HHTTCEEEEEEEC
T ss_pred hhhhCCCHHHHHHHHHHHcCCCeEEEEEEeeccCCCChhHHHHHHHHHhhcCccCCCCHHHHHHHH-HHcCCeEEEEEEC
Confidence 99999999999999999999999998875431 11111222211 1 11111122333334 5699999888776
Q ss_pred C
Q 022305 279 S 279 (299)
Q Consensus 279 ~ 279 (299)
+
T Consensus 217 ~ 217 (273)
T 3bus_A 217 S 217 (273)
T ss_dssp H
T ss_pred c
Confidence 4
No 33
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.69 E-value=1.1e-17 Score=151.12 Aligned_cols=148 Identities=13% Similarity=0.152 Sum_probs=98.0
Q ss_pred CCceeeccCcCCccccCC-CCCCCeEEEEeCCHHHHHhcCCC--------------------------------------
Q 022305 138 YSEVFPPSNTPGVSHFPP-GYKQDRIVGMGMNEEELKRNPVL-------------------------------------- 178 (299)
Q Consensus 138 ~~~vLDiGcG~G~~~~~~-~~~~~~v~gvD~S~~ml~~a~~~-------------------------------------- 178 (299)
..+|||+|||+|...... ...+.+|+|+|+|+.|++.++++
T Consensus 72 ~~~vLDiGcG~G~~~~l~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 151 (289)
T 2g72_A 72 GRTLIDIGSGPTVYQLLSACSHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRARV 151 (289)
T ss_dssp CSEEEEETCTTCCGGGTTGGGGCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHHHE
T ss_pred CCeEEEECCCcChHHHHhhccCCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHhhh
Confidence 468999999999733322 22467999999999999866541
Q ss_pred CcEEEeccCCCCC-CCC-----CCCCeeEEEecccccc----cCCHHHHHHHHHhhccCCcEEEEEecCcchHHHHHHhh
Q 022305 179 TEYVVQDLNLNPK-LPF-----EDNSFDVITNVVSVDY----LTKPIEVFKEMCQVLKPGGLAIVSFSNRCFWTKAISIW 248 (299)
Q Consensus 179 ~~~~~~D~~~~~~-lpf-----~~~~FD~Vis~~~l~~----~~d~~~~l~ei~rvLkpGG~lii~~~~~~~~~~~~~~~ 248 (299)
++++.+|+ .. +|+ ++++||+|+|+.+++| ++++..+|++++|+|||||.|++....... |
T Consensus 152 ~~~~~~D~---~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~~~~~~-------~ 221 (289)
T 2g72_A 152 KRVLPIDV---HQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIGALEES-------W 221 (289)
T ss_dssp EEEECCCT---TSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEEESCC-------E
T ss_pred ceEEeccc---CCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEecCcc-------e
Confidence 23555688 55 554 4567999999999999 667899999999999999998886321110 1
Q ss_pred hhcCCC------chhhhHHHHHHHhCCCCCCeeeecCCC----C--CCCCCeEEEEEEec
Q 022305 249 TSTGDA------DHVMIVGAYFHYAGGYEPPQAVDISPN----P--GRSDPMYVVYSRKA 296 (299)
Q Consensus 249 ~~~~~~------~~~~~~~~~~~~~aGF~~v~~~~~~~~----~--~~~~p~~~v~arK~ 296 (299)
....+. .....+.+.+ ..+||+.+++.....+ . ...+.++.++++|.
T Consensus 222 ~~~~~~~~~~~~~~~~~l~~~l-~~aGf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (289)
T 2g72_A 222 YLAGEARLTVVPVSEEEVREAL-VRSGYKVRDLRTYIMPAHLQTGVDDVKGVFFAWAQKV 280 (289)
T ss_dssp EEETTEEEECCCCCHHHHHHHH-HHTTEEEEEEEEEECCGGGCCTTBCCCEEEEEEEEEC
T ss_pred EEcCCeeeeeccCCHHHHHHHH-HHcCCeEEEeeEeeccccccccccCcceEEEEEEecc
Confidence 111111 1112233334 5699999888776532 1 23345666666664
No 34
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.69 E-value=6.2e-17 Score=146.91 Aligned_cols=108 Identities=15% Similarity=0.144 Sum_probs=85.4
Q ss_pred HHHHHhhhcCCceeeccCcCCccccCCCCCCCeEEEEeCCHHHHHhcCC-----------CCcEEEeccCCCCCCCCCCC
Q 022305 129 PAIAALTKYYSEVFPPSNTPGVSHFPPGYKQDRIVGMGMNEEELKRNPV-----------LTEYVVQDLNLNPKLPFEDN 197 (299)
Q Consensus 129 ~~~~~l~~~~~~vLDiGcG~G~~~~~~~~~~~~v~gvD~S~~ml~~a~~-----------~~~~~~~D~~~~~~lpf~~~ 197 (299)
.+++.+.....+|||+|||+|.........+.+|+|+|+|+.|++.+++ +++++++|+ ..+++ ++
T Consensus 74 ~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~---~~~~~-~~ 149 (299)
T 3g2m_A 74 EFATRTGPVSGPVLELAAGMGRLTFPFLDLGWEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDM---SAFAL-DK 149 (299)
T ss_dssp HHHHHHCCCCSCEEEETCTTTTTHHHHHTTTCCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBT---TBCCC-SC
T ss_pred HHHHhhCCCCCcEEEEeccCCHHHHHHHHcCCeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCch---hcCCc-CC
Confidence 3445554445699999999997544433347899999999999997764 377999999 78887 78
Q ss_pred CeeEEEec-ccccccC--CHHHHHHHHHhhccCCcEEEEEecCcch
Q 022305 198 SFDVITNV-VSVDYLT--KPIEVFKEMCQVLKPGGLAIVSFSNRCF 240 (299)
Q Consensus 198 ~FD~Vis~-~~l~~~~--d~~~~l~ei~rvLkpGG~lii~~~~~~~ 240 (299)
+||+|++. .+++|++ +...+|+++.++|||||.+++++++...
T Consensus 150 ~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~ 195 (299)
T 3g2m_A 150 RFGTVVISSGSINELDEADRRGLYASVREHLEPGGKFLLSLAMSEA 195 (299)
T ss_dssp CEEEEEECHHHHTTSCHHHHHHHHHHHHHHEEEEEEEEEEEECCHH
T ss_pred CcCEEEECCcccccCCHHHHHHHHHHHHHHcCCCcEEEEEeecCcc
Confidence 89999965 6677775 4689999999999999999999887543
No 35
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.68 E-value=2.5e-17 Score=145.49 Aligned_cols=136 Identities=13% Similarity=0.016 Sum_probs=96.4
Q ss_pred cCCceeeccCcCCccccCCC-CCCCeEEEEeCCHHHHHhcCC---------CCcEEEeccCCCCCCCCCCCCeeEEEecc
Q 022305 137 YYSEVFPPSNTPGVSHFPPG-YKQDRIVGMGMNEEELKRNPV---------LTEYVVQDLNLNPKLPFEDNSFDVITNVV 206 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~~~~~~-~~~~~v~gvD~S~~ml~~a~~---------~~~~~~~D~~~~~~lpf~~~~FD~Vis~~ 206 (299)
...+|||+|||+|....... ..+.+++|+|+|+.|++.+++ +++++++|+ ..+++ +++||+|+|..
T Consensus 36 ~~~~VLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~---~~~~~-~~~fD~V~~~~ 111 (256)
T 1nkv_A 36 PGTRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDA---AGYVA-NEKCDVAACVG 111 (256)
T ss_dssp TTCEEEEETCTTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCC---TTCCC-SSCEEEEEEES
T ss_pred CCCEEEEECCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECCh---HhCCc-CCCCCEEEECC
Confidence 44689999999996332211 125799999999999987653 378999999 78887 88999999999
Q ss_pred cccccCCHHHHHHHHHhhccCCcEEEEEecCc---chHHHHHHhhhhcCCC--chhhhHHHHHHHhCCCCCCeeee
Q 022305 207 SVDYLTKPIEVFKEMCQVLKPGGLAIVSFSNR---CFWTKAISIWTSTGDA--DHVMIVGAYFHYAGGYEPPQAVD 277 (299)
Q Consensus 207 ~l~~~~d~~~~l~ei~rvLkpGG~lii~~~~~---~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~aGF~~v~~~~ 277 (299)
+++|++++..+|+++.|+|||||.+++..+.. .........|...... .....+.+.+ .++||+.+++..
T Consensus 112 ~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~aGf~~~~~~~ 186 (256)
T 1nkv_A 112 ATWIAGGFAGAEELLAQSLKPGGIMLIGEPYWRQLPATEEIAQACGVSSTSDFLTLPGLVGAF-DDLGYDVVEMVL 186 (256)
T ss_dssp CGGGTSSSHHHHHHHTTSEEEEEEEEEEEEEETTCCSSHHHHHTTTCSCGGGSCCHHHHHHHH-HTTTBCCCEEEE
T ss_pred ChHhcCCHHHHHHHHHHHcCCCeEEEEecCcccCCCChHHHHHHHhcccccccCCHHHHHHHH-HHCCCeeEEEEe
Confidence 99999999999999999999999999876432 1112222333311100 0111122233 669999988754
No 36
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.68 E-value=2.4e-16 Score=136.26 Aligned_cols=155 Identities=11% Similarity=0.043 Sum_probs=102.5
Q ss_pred cCCceeeccCcCCcc--ccCCCCCCCeEEEEeCCHHHHHhcCC-------------CCcEEEeccCCCCCCCCCCCCeeE
Q 022305 137 YYSEVFPPSNTPGVS--HFPPGYKQDRIVGMGMNEEELKRNPV-------------LTEYVVQDLNLNPKLPFEDNSFDV 201 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~--~~~~~~~~~~v~gvD~S~~ml~~a~~-------------~~~~~~~D~~~~~~lpf~~~~FD~ 201 (299)
...+|||+|||+|.. .+....+..+++|+|+|+.|++.+++ +++++.+|+ ..+++++++||+
T Consensus 29 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~---~~~~~~~~~fD~ 105 (219)
T 3jwg_A 29 NAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSL---VYRDKRFSGYDA 105 (219)
T ss_dssp TCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCS---SSCCGGGTTCSE
T ss_pred CCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCcc---cccccccCCCCE
Confidence 457899999999973 33333345799999999999997764 478899999 788888899999
Q ss_pred EEecccccccCCH--HHHHHHHHhhccCCcEEEEEecCcch------HHHH-HHhhhhcCCCchhhhHHH---HHHHhCC
Q 022305 202 ITNVVSVDYLTKP--IEVFKEMCQVLKPGGLAIVSFSNRCF------WTKA-ISIWTSTGDADHVMIVGA---YFHYAGG 269 (299)
Q Consensus 202 Vis~~~l~~~~d~--~~~l~ei~rvLkpGG~lii~~~~~~~------~~~~-~~~~~~~~~~~~~~~~~~---~~~~~aG 269 (299)
|++..+++|++++ .++++++.++|||||.+++ +++... .... ........... ..-+.+ .+...+|
T Consensus 106 V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~~i~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~l~~~~G 183 (219)
T 3jwg_A 106 ATVIEVIEHLDENRLQAFEKVLFEFTRPQTVIVS-TPNKEYNFHYGNLFEGNLRHRDHRFEWT-RKEFQTWAVKVAEKYG 183 (219)
T ss_dssp EEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEE-EEBGGGGGCCCCT-----GGGCCTTSBC-HHHHHHHHHHHHHHHT
T ss_pred EEEHHHHHhCCHHHHHHHHHHHHHhhCCCEEEEE-ccchhhhhhhcccCcccccccCceeeec-HHHHHHHHHHHHHHCC
Confidence 9999999999866 7999999999999995544 444322 1110 00000000001 111221 2225578
Q ss_pred CCCCeeeecCCC-CCCCCCeEEEEEEecC
Q 022305 270 YEPPQAVDISPN-PGRSDPMYVVYSRKAS 297 (299)
Q Consensus 270 F~~v~~~~~~~~-~~~~~p~~~v~arK~~ 297 (299)
|+ ++...+... +....|.=+.+.||-.
T Consensus 184 f~-v~~~~~g~~~~~~g~~~qi~~~~~~~ 211 (219)
T 3jwg_A 184 YS-VRFLQIGEIDDEFGSPTQMGVFTLGA 211 (219)
T ss_dssp EE-EEEEEESCCCTTSCCSEEEEEEEECC
T ss_pred cE-EEEEecCCccccCCCCeEEEEEeccC
Confidence 96 555555433 4455677777777743
No 37
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.68 E-value=2.8e-17 Score=149.27 Aligned_cols=152 Identities=14% Similarity=0.225 Sum_probs=100.0
Q ss_pred CCceeeccCcCCccc--cCCCCCCCeEEEEeCCHHHHHhcCC--------------------------------------
Q 022305 138 YSEVFPPSNTPGVSH--FPPGYKQDRIVGMGMNEEELKRNPV-------------------------------------- 177 (299)
Q Consensus 138 ~~~vLDiGcG~G~~~--~~~~~~~~~v~gvD~S~~ml~~a~~-------------------------------------- 177 (299)
..+|||+|||+|... +...++..+|+|+|+|+.|++.|++
T Consensus 47 ~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (292)
T 3g07_A 47 GRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRSCF 126 (292)
T ss_dssp TSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC------------------------------------
T ss_pred CCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhccccccccccccccccccccccccccccc
Confidence 468999999999633 3334457899999999999987653
Q ss_pred ----------------------------CCcEEEeccCCCCCC-----CCCCCCeeEEEecccccccC------CHHHHH
Q 022305 178 ----------------------------LTEYVVQDLNLNPKL-----PFEDNSFDVITNVVSVDYLT------KPIEVF 218 (299)
Q Consensus 178 ----------------------------~~~~~~~D~~~~~~l-----pf~~~~FD~Vis~~~l~~~~------d~~~~l 218 (299)
+++|+++|+ ... ++.+++||+|+|..+++|+. ++.++|
T Consensus 127 p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~---~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l 203 (292)
T 3g07_A 127 PASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNY---VLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMF 203 (292)
T ss_dssp ---------------CCSSTTCCSSTTTTEEEEECCC---CCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHH
T ss_pred cchhhhccCccccccccccccccccccccceEEeccc---ccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHH
Confidence 366778887 433 35788999999999998885 788999
Q ss_pred HHHHhhccCCcEEEEEecCcchHH-------HHHHhhhhcCCCchhhhHHHHHHH-hCCCCCCeeeecCC--CCCCCCCe
Q 022305 219 KEMCQVLKPGGLAIVSFSNRCFWT-------KAISIWTSTGDADHVMIVGAYFHY-AGGYEPPQAVDISP--NPGRSDPM 288 (299)
Q Consensus 219 ~ei~rvLkpGG~lii~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~-~aGF~~v~~~~~~~--~~~~~~p~ 288 (299)
++++++|||||.|+++..++..+. .....+....- ....+.+++.. .+||+.++++.... ..++..+.
T Consensus 204 ~~~~~~LkpGG~lil~~~~~~~y~~~~~~~~~~~~~~~~~~~--~p~~~~~~L~~~~~GF~~~~~~~~~~~~~~g~~r~i 281 (292)
T 3g07_A 204 RRIYRHLRPGGILVLEPQPWSSYGKRKTLTETIYKNYYRIQL--KPEQFSSYLTSPDVGFSSYELVATPHNTSKGFQRPV 281 (292)
T ss_dssp HHHHHHEEEEEEEEEECCCHHHHHTTTTSCHHHHHHHHHCCC--CGGGHHHHHTSTTTCCCEEEEC-----------CCC
T ss_pred HHHHHHhCCCcEEEEecCCchhhhhhhcccHHHHhhhhcEEE--cHHHHHHHHHhcCCCceEEEEeccCCCCCCCccceE
Confidence 999999999999999865533221 11222221111 12344555543 48999999887643 23444454
Q ss_pred EEEEEEec
Q 022305 289 YVVYSRKA 296 (299)
Q Consensus 289 ~~v~arK~ 296 (299)
+ +.+|+
T Consensus 282 ~--~~~k~ 287 (292)
T 3g07_A 282 Y--LFHKA 287 (292)
T ss_dssp E--EEECC
T ss_pred E--EEEcC
Confidence 4 44554
No 38
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.68 E-value=1.3e-17 Score=147.74 Aligned_cols=138 Identities=16% Similarity=0.173 Sum_probs=99.8
Q ss_pred CCceeeccCcCCccccCCCCC-CCeEEEEeCCHHHHHhcCC------CCcEEEeccCCCCCCCCCCCCeeEEEecccccc
Q 022305 138 YSEVFPPSNTPGVSHFPPGYK-QDRIVGMGMNEEELKRNPV------LTEYVVQDLNLNPKLPFEDNSFDVITNVVSVDY 210 (299)
Q Consensus 138 ~~~vLDiGcG~G~~~~~~~~~-~~~v~gvD~S~~ml~~a~~------~~~~~~~D~~~~~~lpf~~~~FD~Vis~~~l~~ 210 (299)
..+|||+|||+|......... +.+|+|+|+|+.|++.+++ +++++++|+ ..+++++++||+|++..+++|
T Consensus 56 ~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~---~~~~~~~~~fD~v~~~~~l~~ 132 (266)
T 3ujc_A 56 NSKVLDIGSGLGGGCMYINEKYGAHTHGIDICSNIVNMANERVSGNNKIIFEANDI---LTKEFPENNFDLIYSRDAILA 132 (266)
T ss_dssp TCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHTCCSCTTEEEEECCT---TTCCCCTTCEEEEEEESCGGG
T ss_pred CCEEEEECCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhhcCCCeEEEECcc---ccCCCCCCcEEEEeHHHHHHh
Confidence 458999999999633322211 6799999999999987764 368899999 888999999999999999999
Q ss_pred c--CCHHHHHHHHHhhccCCcEEEEEecCc---chHHHHHHhhhhc-C-CCchhhhHHHHHHHhCCCCCCeeeecC
Q 022305 211 L--TKPIEVFKEMCQVLKPGGLAIVSFSNR---CFWTKAISIWTST-G-DADHVMIVGAYFHYAGGYEPPQAVDIS 279 (299)
Q Consensus 211 ~--~d~~~~l~ei~rvLkpGG~lii~~~~~---~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~aGF~~v~~~~~~ 279 (299)
+ +++..+++++.|+|||||.+++..+.. ..+...+..+... + .......+.+.+ ..+||+.+++..+.
T Consensus 133 ~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gf~~~~~~~~~ 207 (266)
T 3ujc_A 133 LSLENKNKLFQKCYKWLKPTGTLLITDYCATEKENWDDEFKEYVKQRKYTLITVEEYADIL-TACNFKNVVSKDLS 207 (266)
T ss_dssp SCHHHHHHHHHHHHHHEEEEEEEEEEEEEESCGGGCCHHHHHHHHHHTCCCCCHHHHHHHH-HHTTCEEEEEEECH
T ss_pred cChHHHHHHHHHHHHHcCCCCEEEEEEeccCCcccchHHHHHHHhcCCCCCCCHHHHHHHH-HHcCCeEEEEEeCC
Confidence 9 899999999999999999998876432 1222222222111 1 111122333344 56999998887763
No 39
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.68 E-value=6.4e-17 Score=139.44 Aligned_cols=147 Identities=13% Similarity=0.168 Sum_probs=100.4
Q ss_pred CCceeeccCcCCccccCCCCCCCeEEEEeCCHHHHHhcCC------CCcEEEeccCCCCCCCCCCCCeeEEEeccccccc
Q 022305 138 YSEVFPPSNTPGVSHFPPGYKQDRIVGMGMNEEELKRNPV------LTEYVVQDLNLNPKLPFEDNSFDVITNVVSVDYL 211 (299)
Q Consensus 138 ~~~vLDiGcG~G~~~~~~~~~~~~v~gvD~S~~ml~~a~~------~~~~~~~D~~~~~~lpf~~~~FD~Vis~~~l~~~ 211 (299)
..+|||+|||+|.........+.+++|+|+|+.|++.+++ +++++++|+ .+++ ++++||+|+++.+++|+
T Consensus 52 ~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~---~~~~-~~~~fD~v~~~~~l~~~ 127 (216)
T 3ofk_A 52 VSNGLEIGCAAGAFTEKLAPHCKRLTVIDVMPRAIGRACQRTKRWSHISWAATDI---LQFS-TAELFDLIVVAEVLYYL 127 (216)
T ss_dssp EEEEEEECCTTSHHHHHHGGGEEEEEEEESCHHHHHHHHHHTTTCSSEEEEECCT---TTCC-CSCCEEEEEEESCGGGS
T ss_pred CCcEEEEcCCCCHHHHHHHHcCCEEEEEECCHHHHHHHHHhcccCCCeEEEEcch---hhCC-CCCCccEEEEccHHHhC
Confidence 3589999999997433333335799999999999987765 368999999 7777 67899999999999999
Q ss_pred CCH---HHHHHHHHhhccCCcEEEEEecCcchHHHHHHhhhhcCCCchhhhHHHHHHHhCCCCCCeeeecCCCCCCCCCe
Q 022305 212 TKP---IEVFKEMCQVLKPGGLAIVSFSNRCFWTKAISIWTSTGDADHVMIVGAYFHYAGGYEPPQAVDISPNPGRSDPM 288 (299)
Q Consensus 212 ~d~---~~~l~ei~rvLkpGG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aGF~~v~~~~~~~~~~~~~p~ 288 (299)
+++ .++++++.++|||||.++++++... ....|..... ...+..++. .++..++.+..... .....+
T Consensus 128 ~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~----~~~~~~~~~~---~~~~~~~~~--~~~~~~e~~~~~~~-~~~~d~ 197 (216)
T 3ofk_A 128 EDMTQMRTAIDNMVKMLAPGGHLVFGSARDA----TCRRWGHVAG---AETVITILT--EALTEVERVQCQGQ-SADEDC 197 (216)
T ss_dssp SSHHHHHHHHHHHHHTEEEEEEEEEEEECHH----HHHHTTCSCC---HHHHHHHHH--HHSEEEEEEEEECS-STTCEE
T ss_pred CCHHHHHHHHHHHHHHcCCCCEEEEEecCCC----cchhhhhhhh---HHHHHHHHH--hhccceEEEeccCC-ccccch
Confidence 988 5679999999999999999876543 2233444222 223333343 22444443333221 123445
Q ss_pred EEEEEEecCC
Q 022305 289 YVVYSRKAST 298 (299)
Q Consensus 289 ~~v~arK~~~ 298 (299)
++...+|++.
T Consensus 198 ~l~~~~~~~~ 207 (216)
T 3ofk_A 198 LLARFRNPER 207 (216)
T ss_dssp EEEEEECCC-
T ss_pred hHHHHhCCcc
Confidence 5556666653
No 40
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.68 E-value=1.4e-17 Score=143.23 Aligned_cols=152 Identities=12% Similarity=0.036 Sum_probs=105.6
Q ss_pred CCceeeccCcCCccccCCCCCCCeEEEEeCCHHHHHhcCC--CCcEEEeccCCCCCCCCCCCCeeEEEecccccccC--C
Q 022305 138 YSEVFPPSNTPGVSHFPPGYKQDRIVGMGMNEEELKRNPV--LTEYVVQDLNLNPKLPFEDNSFDVITNVVSVDYLT--K 213 (299)
Q Consensus 138 ~~~vLDiGcG~G~~~~~~~~~~~~v~gvD~S~~ml~~a~~--~~~~~~~D~~~~~~lpf~~~~FD~Vis~~~l~~~~--d 213 (299)
..+|||+|||+|.........+.+++|+|+|+.|++.+++ .++++.+|+ ..++ .+++||+|++..+++|++ +
T Consensus 44 ~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~d~---~~~~-~~~~fD~v~~~~~l~~~~~~~ 119 (211)
T 3e23_A 44 GAKILELGCGAGYQAEAMLAAGFDVDATDGSPELAAEASRRLGRPVRTMLF---HQLD-AIDAYDAVWAHACLLHVPRDE 119 (211)
T ss_dssp TCEEEESSCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTSCCEECCG---GGCC-CCSCEEEEEECSCGGGSCHHH
T ss_pred CCcEEEECCCCCHHHHHHHHcCCeEEEECCCHHHHHHHHHhcCCceEEeee---ccCC-CCCcEEEEEecCchhhcCHHH
Confidence 4689999999997433332236799999999999998877 478899999 7777 789999999999999998 8
Q ss_pred HHHHHHHHHhhccCCcEEEEEecCcchHHHHHHhhhhcCCCchhhhHHHHHHHhCC-CCCCeeeecCCCC-CCC-CCeEE
Q 022305 214 PIEVFKEMCQVLKPGGLAIVSFSNRCFWTKAISIWTSTGDADHVMIVGAYFHYAGG-YEPPQAVDISPNP-GRS-DPMYV 290 (299)
Q Consensus 214 ~~~~l~ei~rvLkpGG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aG-F~~v~~~~~~~~~-~~~-~p~~~ 290 (299)
+..+|+++.++|||||.+++.++....... ..+...........+.+.+ +.+| |+.+++....... .+. ..+..
T Consensus 120 ~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l-~~aG~f~~~~~~~~~~~~~~~~~~~wl~ 196 (211)
T 3e23_A 120 LADVLKLIWRALKPGGLFYASYKSGEGEGR--DKLARYYNYPSEEWLRARY-AEAGTWASVAVESSEGKGFDQELAQFLH 196 (211)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEEECCSSCEE--CTTSCEECCCCHHHHHHHH-HHHCCCSEEEEEEEEEECTTSCEEEEEE
T ss_pred HHHHHHHHHHhcCCCcEEEEEEcCCCcccc--cccchhccCCCHHHHHHHH-HhCCCcEEEEEEeccCCCCCCCCceEEE
Confidence 889999999999999999998765321100 0000000011112233334 5689 9999887765432 222 33455
Q ss_pred EEEEec
Q 022305 291 VYSRKA 296 (299)
Q Consensus 291 v~arK~ 296 (299)
++.+|+
T Consensus 197 ~~~~~~ 202 (211)
T 3e23_A 197 VSVRKP 202 (211)
T ss_dssp EEEECC
T ss_pred EEEecC
Confidence 555554
No 41
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.68 E-value=1e-17 Score=151.66 Aligned_cols=137 Identities=16% Similarity=0.079 Sum_probs=99.3
Q ss_pred cCCceeeccCcCCccccCCCC-CCCeEEEEeCCHHHHHhcCC---------CCcEEEeccCCCCCCCCCCCCeeEEEecc
Q 022305 137 YYSEVFPPSNTPGVSHFPPGY-KQDRIVGMGMNEEELKRNPV---------LTEYVVQDLNLNPKLPFEDNSFDVITNVV 206 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~~~~~~~-~~~~v~gvD~S~~ml~~a~~---------~~~~~~~D~~~~~~lpf~~~~FD~Vis~~ 206 (299)
...+|||+|||+|........ .+.+++|+|+|+.|++.+++ +++++++|+ ..+|+++++||+|++..
T Consensus 82 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~---~~~~~~~~~fD~v~~~~ 158 (297)
T 2o57_A 82 RQAKGLDLGAGYGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSF---LEIPCEDNSYDFIWSQD 158 (297)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCT---TSCSSCTTCEEEEEEES
T ss_pred CCCEEEEeCCCCCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCc---ccCCCCCCCEeEEEecc
Confidence 346899999999963322211 15699999999999987654 378999999 88999999999999999
Q ss_pred cccccCCHHHHHHHHHhhccCCcEEEEEecCcc------hHHHHHHhhhhcCCCchhhhHHHHHHHhCCCCCCeeeec
Q 022305 207 SVDYLTKPIEVFKEMCQVLKPGGLAIVSFSNRC------FWTKAISIWTSTGDADHVMIVGAYFHYAGGYEPPQAVDI 278 (299)
Q Consensus 207 ~l~~~~d~~~~l~ei~rvLkpGG~lii~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~aGF~~v~~~~~ 278 (299)
+++|++++..+|+++.|+|||||.+++..+... .+...+..+.. ........+.+.+ ..+||+.+++.++
T Consensus 159 ~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l-~~aGf~~~~~~~~ 234 (297)
T 2o57_A 159 AFLHSPDKLKVFQECARVLKPRGVMAITDPMKEDGIDKSSIQPILDRIKL-HDMGSLGLYRSLA-KECGLVTLRTFSR 234 (297)
T ss_dssp CGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEECTTCCGGGGHHHHHHHTC-SSCCCHHHHHHHH-HHTTEEEEEEEEC
T ss_pred hhhhcCCHHHHHHHHHHHcCCCeEEEEEEeccCCCCchHHHHHHHHHhcC-CCCCCHHHHHHHH-HHCCCeEEEEEEC
Confidence 999999999999999999999999988764321 12222222211 1111222333334 5589998888765
No 42
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.67 E-value=3.7e-17 Score=144.79 Aligned_cols=149 Identities=15% Similarity=0.213 Sum_probs=103.8
Q ss_pred CceeeccCcCCccccCCCCCCC-eEEEEeCCHHHHHhcCCC-------------------------------------C-
Q 022305 139 SEVFPPSNTPGVSHFPPGYKQD-RIVGMGMNEEELKRNPVL-------------------------------------T- 179 (299)
Q Consensus 139 ~~vLDiGcG~G~~~~~~~~~~~-~v~gvD~S~~ml~~a~~~-------------------------------------~- 179 (299)
.+|||+|||+|.........+. +|+|+|+|+.|++.++++ +
T Consensus 58 ~~vLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~ 137 (265)
T 2i62_A 58 ELLIDIGSGPTIYQLLSACESFTEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLRRAIK 137 (265)
T ss_dssp EEEEEESCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHHHHEE
T ss_pred CEEEEECCCccHHHHHHhhcccCeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhhhhhe
Confidence 5799999999975554444444 899999999999877431 4
Q ss_pred cEEEeccCCCCCC-CCCC---CCeeEEEeccccc----ccCCHHHHHHHHHhhccCCcEEEEEecCcchHHHHHHhhhhc
Q 022305 180 EYVVQDLNLNPKL-PFED---NSFDVITNVVSVD----YLTKPIEVFKEMCQVLKPGGLAIVSFSNRCFWTKAISIWTST 251 (299)
Q Consensus 180 ~~~~~D~~~~~~l-pf~~---~~FD~Vis~~~l~----~~~d~~~~l~ei~rvLkpGG~lii~~~~~~~~~~~~~~~~~~ 251 (299)
+++.+|+ ..+ ++++ ++||+|++..+++ +++++..+++++.|+|||||.+++....... +...
T Consensus 138 ~~~~~d~---~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~-------~~~~ 207 (265)
T 2i62_A 138 QVLKCDV---TQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDALKSS-------YYMI 207 (265)
T ss_dssp EEEECCT---TSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCC-------EEEE
T ss_pred eEEEeee---ccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEecCCCc-------eEEc
Confidence 7888998 554 3355 8999999999999 6668899999999999999999887643211 1111
Q ss_pred CCC------chhhhHHHHHHHhCCCCCCeeeecCCC----CCCCCCeEEEEEEecCC
Q 022305 252 GDA------DHVMIVGAYFHYAGGYEPPQAVDISPN----PGRSDPMYVVYSRKAST 298 (299)
Q Consensus 252 ~~~------~~~~~~~~~~~~~aGF~~v~~~~~~~~----~~~~~p~~~v~arK~~~ 298 (299)
+.. -....+.+.+ ..+||+.+++...... ....+.+++++|||+..
T Consensus 208 ~~~~~~~~~~~~~~~~~~l-~~aGf~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~ 263 (265)
T 2i62_A 208 GEQKFSSLPLGWETVRDAV-EEAGYTIEQFEVISQNYSSTTSNNEGLFSLVGRKPGR 263 (265)
T ss_dssp TTEEEECCCCCHHHHHHHH-HHTTCEEEEEEEECCCCCTTTBCCCCEEEEEEECCC-
T ss_pred CCccccccccCHHHHHHHH-HHCCCEEEEEEEecccCCccccccceEEEEEeccccc
Confidence 110 0111233334 4599999888776532 12234678899999753
No 43
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.67 E-value=7.2e-17 Score=144.38 Aligned_cols=98 Identities=26% Similarity=0.384 Sum_probs=84.2
Q ss_pred cCCceeeccCcCCc--cccCCCCCCCeEEEEeCCHHHHHhcCC--------CCcEEEeccCCCCCCCCCCCCeeEEEecc
Q 022305 137 YYSEVFPPSNTPGV--SHFPPGYKQDRIVGMGMNEEELKRNPV--------LTEYVVQDLNLNPKLPFEDNSFDVITNVV 206 (299)
Q Consensus 137 ~~~~vLDiGcG~G~--~~~~~~~~~~~v~gvD~S~~ml~~a~~--------~~~~~~~D~~~~~~lpf~~~~FD~Vis~~ 206 (299)
...+|||+|||+|. ..+....++.+++|+|+|+.|++.+++ +++++.+|+ ..+++++++||+|++..
T Consensus 37 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~---~~~~~~~~~fD~v~~~~ 113 (276)
T 3mgg_A 37 PGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGIKNVKFLQANI---FSLPFEDSSFDHIFVCF 113 (276)
T ss_dssp TTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCG---GGCCSCTTCEEEEEEES
T ss_pred CCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEccc---ccCCCCCCCeeEEEEec
Confidence 44689999999996 233333457899999999999987654 378899999 78899999999999999
Q ss_pred cccccCCHHHHHHHHHhhccCCcEEEEEecC
Q 022305 207 SVDYLTKPIEVFKEMCQVLKPGGLAIVSFSN 237 (299)
Q Consensus 207 ~l~~~~d~~~~l~ei~rvLkpGG~lii~~~~ 237 (299)
+++|++++..+++++.++|||||.+++..++
T Consensus 114 ~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 144 (276)
T 3mgg_A 114 VLEHLQSPEEALKSLKKVLKPGGTITVIEGD 144 (276)
T ss_dssp CGGGCSCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred hhhhcCCHHHHHHHHHHHcCCCcEEEEEEcC
Confidence 9999999999999999999999999987654
No 44
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.67 E-value=4.7e-17 Score=142.32 Aligned_cols=98 Identities=19% Similarity=0.299 Sum_probs=80.5
Q ss_pred cCCceeeccCcCCccccCCCCCCCeEEEEeCCHHHHHhcCC-------CCcEEEeccCCCCCCCCCCCCeeEEEecc-cc
Q 022305 137 YYSEVFPPSNTPGVSHFPPGYKQDRIVGMGMNEEELKRNPV-------LTEYVVQDLNLNPKLPFEDNSFDVITNVV-SV 208 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~~~~~~~~~~~v~gvD~S~~ml~~a~~-------~~~~~~~D~~~~~~lpf~~~~FD~Vis~~-~l 208 (299)
...+|||+|||+|......... .+++|+|+|+.|++.+++ +++++.+|+ ..++++ ++||+|++.. ++
T Consensus 33 ~~~~vLdiG~G~G~~~~~l~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~---~~~~~~-~~fD~v~~~~~~~ 107 (243)
T 3d2l_A 33 PGKRIADIGCGTGTATLLLADH-YEVTGVDLSEEMLEIAQEKAMETNRHVDFWVQDM---RELELP-EPVDAITILCDSL 107 (243)
T ss_dssp TTCEEEEESCTTCHHHHHHTTT-SEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCG---GGCCCS-SCEEEEEECTTGG
T ss_pred CCCeEEEecCCCCHHHHHHhhC-CeEEEEECCHHHHHHHHHhhhhcCCceEEEEcCh---hhcCCC-CCcCEEEEeCCch
Confidence 3479999999999733332223 799999999999987764 378999999 777776 7899999986 99
Q ss_pred ccc---CCHHHHHHHHHhhccCCcEEEEEecCcc
Q 022305 209 DYL---TKPIEVFKEMCQVLKPGGLAIVSFSNRC 239 (299)
Q Consensus 209 ~~~---~d~~~~l~ei~rvLkpGG~lii~~~~~~ 239 (299)
+|+ .++..+++++.++|||||.++++++++.
T Consensus 108 ~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 141 (243)
T 3d2l_A 108 NYLQTEADVKQTFDSAARLLTDGGKLLFDVHSPY 141 (243)
T ss_dssp GGCCSHHHHHHHHHHHHHHEEEEEEEEEEEECHH
T ss_pred hhcCCHHHHHHHHHHHHHhcCCCeEEEEEcCCHH
Confidence 999 4567899999999999999999887654
No 45
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.66 E-value=1.7e-16 Score=149.56 Aligned_cols=139 Identities=15% Similarity=0.160 Sum_probs=99.2
Q ss_pred cCCceeeccCcCCccc--cCCCC-CCCeEEEEeCCHHHHHhcCC----------------CCcEEEeccCCCCCC-----
Q 022305 137 YYSEVFPPSNTPGVSH--FPPGY-KQDRIVGMGMNEEELKRNPV----------------LTEYVVQDLNLNPKL----- 192 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~~--~~~~~-~~~~v~gvD~S~~ml~~a~~----------------~~~~~~~D~~~~~~l----- 192 (299)
...+|||+|||+|... +.... ++.+|+|+|+|+.|++.+++ +++++++|+ +.+
T Consensus 83 ~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~---~~l~~~~~ 159 (383)
T 4fsd_A 83 EGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFI---ENLATAEP 159 (383)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCT---TCGGGCBS
T ss_pred CCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccH---HHhhhccc
Confidence 3468999999999632 22222 46799999999999987653 578999999 776
Q ss_pred -CCCCCCeeEEEecccccccCCHHHHHHHHHhhccCCcEEEEEecCcc-----hHHHHHHhhhhcC-CCchhhhHHHHHH
Q 022305 193 -PFEDNSFDVITNVVSVDYLTKPIEVFKEMCQVLKPGGLAIVSFSNRC-----FWTKAISIWTSTG-DADHVMIVGAYFH 265 (299)
Q Consensus 193 -pf~~~~FD~Vis~~~l~~~~d~~~~l~ei~rvLkpGG~lii~~~~~~-----~~~~~~~~~~~~~-~~~~~~~~~~~~~ 265 (299)
++++++||+|+++.+++|++|+..+|+++.|+|||||.+++...... ........|.... ......-+.+.+
T Consensus 160 ~~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll- 238 (383)
T 4fsd_A 160 EGVPDSSVDIVISNCVCNLSTNKLALFKEIHRVLRDGGELYFSDVYADRRLSEAAQQDPILYGECLGGALYLEDFRRLV- 238 (383)
T ss_dssp CCCCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEESSCCCHHHHHCHHHHHTTCTTCCBHHHHHHHH-
T ss_pred CCCCCCCEEEEEEccchhcCCCHHHHHHHHHHHcCCCCEEEEEEeccccccCHhHhhhHHHhhcccccCCCHHHHHHHH-
Confidence 89999999999999999999999999999999999999988754321 1111111222211 111122333344
Q ss_pred HhCCCCCCeeeecC
Q 022305 266 YAGGYEPPQAVDIS 279 (299)
Q Consensus 266 ~~aGF~~v~~~~~~ 279 (299)
..+||+.+++....
T Consensus 239 ~~aGF~~v~~~~~~ 252 (383)
T 4fsd_A 239 AEAGFRDVRLVSVG 252 (383)
T ss_dssp HHTTCCCEEEEEEE
T ss_pred HHCCCceEEEEecc
Confidence 56999998776653
No 46
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.66 E-value=6.6e-17 Score=134.21 Aligned_cols=138 Identities=13% Similarity=0.028 Sum_probs=99.4
Q ss_pred cCCceeeccCcCCccccCCCCCCCeEEEEeCCHHHHHhcCC---CCcEEEeccCCCCCCCCCCCCeeEEEecccccccCC
Q 022305 137 YYSEVFPPSNTPGVSHFPPGYKQDRIVGMGMNEEELKRNPV---LTEYVVQDLNLNPKLPFEDNSFDVITNVVSVDYLTK 213 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~~~~~~~~~~~v~gvD~S~~ml~~a~~---~~~~~~~D~~~~~~lpf~~~~FD~Vis~~~l~~~~d 213 (299)
...+|||+|||+|...........+++|+|+|+.+++.+++ ++++..+| +++++++||+|++..+++|+++
T Consensus 17 ~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~v~~~~~d------~~~~~~~~D~v~~~~~l~~~~~ 90 (170)
T 3i9f_A 17 KKGVIVDYGCGNGFYCKYLLEFATKLYCIDINVIALKEVKEKFDSVITLSDP------KEIPDNSVDFILFANSFHDMDD 90 (170)
T ss_dssp CCEEEEEETCTTCTTHHHHHTTEEEEEEECSCHHHHHHHHHHCTTSEEESSG------GGSCTTCEEEEEEESCSTTCSC
T ss_pred CCCeEEEECCCCCHHHHHHHhhcCeEEEEeCCHHHHHHHHHhCCCcEEEeCC------CCCCCCceEEEEEccchhcccC
Confidence 34589999999997443332223499999999999998865 46777666 5678899999999999999999
Q ss_pred HHHHHHHHHhhccCCcEEEEEecCcchHHHHHHhhhhcCCCch----hhhHHHHHHHhCCCCCCeeeecCCCCCCCCCeE
Q 022305 214 PIEVFKEMCQVLKPGGLAIVSFSNRCFWTKAISIWTSTGDADH----VMIVGAYFHYAGGYEPPQAVDISPNPGRSDPMY 289 (299)
Q Consensus 214 ~~~~l~ei~rvLkpGG~lii~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~aGF~~v~~~~~~~~~~~~~p~~ 289 (299)
+..+++++.|+|||||.+++......... .....+ ..-+.+.+ . ||+.+++.... ...|
T Consensus 91 ~~~~l~~~~~~L~pgG~l~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~l--~-Gf~~~~~~~~~------~~~~ 153 (170)
T 3i9f_A 91 KQHVISEVKRILKDDGRVIIIDWRKENTG--------IGPPLSIRMDEKDYMGWF--S-NFVVEKRFNPT------PYHF 153 (170)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEEECSSCCS--------SSSCGGGCCCHHHHHHHT--T-TEEEEEEECSS------TTEE
T ss_pred HHHHHHHHHHhcCCCCEEEEEEcCccccc--------cCchHhhhcCHHHHHHHH--h-CcEEEEccCCC------CceE
Confidence 99999999999999999988754432100 000011 11222233 2 99988887655 4678
Q ss_pred EEEEEecC
Q 022305 290 VVYSRKAS 297 (299)
Q Consensus 290 ~v~arK~~ 297 (299)
.++++|.+
T Consensus 154 ~l~~~~~~ 161 (170)
T 3i9f_A 154 GLVLKRKT 161 (170)
T ss_dssp EEEEEECC
T ss_pred EEEEecCC
Confidence 88888864
No 47
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.66 E-value=2e-17 Score=157.12 Aligned_cols=137 Identities=10% Similarity=0.001 Sum_probs=98.6
Q ss_pred cCCceeeccCcCCccccCCCCCCCeEEEEeCCHHHHHhcCCC-CcEE-----EeccCCCCCCCCCCCCeeEEEecccccc
Q 022305 137 YYSEVFPPSNTPGVSHFPPGYKQDRIVGMGMNEEELKRNPVL-TEYV-----VQDLNLNPKLPFEDNSFDVITNVVSVDY 210 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~~~~~~~~~~~v~gvD~S~~ml~~a~~~-~~~~-----~~D~~~~~~lpf~~~~FD~Vis~~~l~~ 210 (299)
...+|||+|||+|.........+.+++|+|+|+.|++.++++ .... ..+. +.+++++++||+|++.++++|
T Consensus 107 ~~~~VLDiGcG~G~~~~~l~~~g~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~---~~l~~~~~~fD~I~~~~vl~h 183 (416)
T 4e2x_A 107 PDPFIVEIGCNDGIMLRTIQEAGVRHLGFEPSSGVAAKAREKGIRVRTDFFEKATA---DDVRRTEGPANVIYAANTLCH 183 (416)
T ss_dssp SSCEEEEETCTTTTTHHHHHHTTCEEEEECCCHHHHHHHHTTTCCEECSCCSHHHH---HHHHHHHCCEEEEEEESCGGG
T ss_pred CCCEEEEecCCCCHHHHHHHHcCCcEEEECCCHHHHHHHHHcCCCcceeeechhhH---hhcccCCCCEEEEEECChHHh
Confidence 346899999999974433333467999999999999988775 3322 2333 456777899999999999999
Q ss_pred cCCHHHHHHHHHhhccCCcEEEEEecCcchHHHHHHhhhhcCCCchhh-----hHHHHHHHhCCCCCCeeeecC
Q 022305 211 LTKPIEVFKEMCQVLKPGGLAIVSFSNRCFWTKAISIWTSTGDADHVM-----IVGAYFHYAGGYEPPQAVDIS 279 (299)
Q Consensus 211 ~~d~~~~l~ei~rvLkpGG~lii~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~aGF~~v~~~~~~ 279 (299)
++|+..+|++++|+|||||.+++++++..........+... ..|.. .+.+.+ ..+||+.+++..++
T Consensus 184 ~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~--~~~~~~~s~~~l~~ll-~~aGf~~~~~~~~~ 254 (416)
T 4e2x_A 184 IPYVQSVLEGVDALLAPDGVFVFEDPYLGDIVAKTSFDQIF--DEHFFLFSATSVQGMA-QRCGFELVDVQRLP 254 (416)
T ss_dssp CTTHHHHHHHHHHHEEEEEEEEEEEECHHHHHHHTCGGGCS--TTCCEECCHHHHHHHH-HHTTEEEEEEEEEC
T ss_pred cCCHHHHHHHHHHHcCCCeEEEEEeCChHHhhhhcchhhhh--hhhhhcCCHHHHHHHH-HHcCCEEEEEEEcc
Confidence 99999999999999999999999988754333221111111 12222 222333 66999998887764
No 48
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.65 E-value=4.8e-17 Score=144.62 Aligned_cols=95 Identities=12% Similarity=0.154 Sum_probs=80.8
Q ss_pred cCCceeeccCcCCccccCCCCCCCeEEEEeCCHHHHHhcCC---CCcEEEeccCCCCCCCCCCCCeeEEEecc-cccccC
Q 022305 137 YYSEVFPPSNTPGVSHFPPGYKQDRIVGMGMNEEELKRNPV---LTEYVVQDLNLNPKLPFEDNSFDVITNVV-SVDYLT 212 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~~~~~~~~~~~v~gvD~S~~ml~~a~~---~~~~~~~D~~~~~~lpf~~~~FD~Vis~~-~l~~~~ 212 (299)
...+|||+|||+|.........+.+|+|+|+|+.|++.+++ +++++++|+ ..+++ +++||+|+|.. +++|++
T Consensus 50 ~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~---~~~~~-~~~fD~v~~~~~~l~~~~ 125 (263)
T 3pfg_A 50 KAASLLDVACGTGMHLRHLADSFGTVEGLELSADMLAIARRRNPDAVLHHGDM---RDFSL-GRRFSAVTCMFSSIGHLA 125 (263)
T ss_dssp TCCEEEEETCTTSHHHHHHTTTSSEEEEEESCHHHHHHHHHHCTTSEEEECCT---TTCCC-SCCEEEEEECTTGGGGSC
T ss_pred CCCcEEEeCCcCCHHHHHHHHcCCeEEEEECCHHHHHHHHhhCCCCEEEECCh---HHCCc-cCCcCEEEEcCchhhhcC
Confidence 34789999999997444433346799999999999998766 489999999 78887 78999999998 999996
Q ss_pred ---CHHHHHHHHHhhccCCcEEEEEe
Q 022305 213 ---KPIEVFKEMCQVLKPGGLAIVSF 235 (299)
Q Consensus 213 ---d~~~~l~ei~rvLkpGG~lii~~ 235 (299)
+...+|+++.++|||||.++++.
T Consensus 126 ~~~~~~~~l~~~~~~L~pgG~l~i~~ 151 (263)
T 3pfg_A 126 GQAELDAALERFAAHVLPDGVVVVEP 151 (263)
T ss_dssp HHHHHHHHHHHHHHTEEEEEEEEECC
T ss_pred CHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 56788999999999999999974
No 49
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.65 E-value=3.7e-16 Score=140.99 Aligned_cols=97 Identities=15% Similarity=0.193 Sum_probs=83.0
Q ss_pred cCCceeeccCcCCc--cccCCCCC-CCeEEEEeCCHHHHHhcCC-------CCcEEEeccCCCCCCCCCCCCeeEEEecc
Q 022305 137 YYSEVFPPSNTPGV--SHFPPGYK-QDRIVGMGMNEEELKRNPV-------LTEYVVQDLNLNPKLPFEDNSFDVITNVV 206 (299)
Q Consensus 137 ~~~~vLDiGcG~G~--~~~~~~~~-~~~v~gvD~S~~ml~~a~~-------~~~~~~~D~~~~~~lpf~~~~FD~Vis~~ 206 (299)
...+|||+|||+|. ..+....+ +.+|+|+|+|+.|++.+++ +++++++|+ .++++ +++||+|++..
T Consensus 22 ~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~v~~~~~d~---~~~~~-~~~fD~v~~~~ 97 (284)
T 3gu3_A 22 KPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDA---TEIEL-NDKYDIAICHA 97 (284)
T ss_dssp SCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSSEEEEEESCT---TTCCC-SSCEEEEEEES
T ss_pred CCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEcch---hhcCc-CCCeeEEEECC
Confidence 34689999999997 33444445 4899999999999986654 378999999 77888 46899999999
Q ss_pred cccccCCHHHHHHHHHhhccCCcEEEEEecC
Q 022305 207 SVDYLTKPIEVFKEMCQVLKPGGLAIVSFSN 237 (299)
Q Consensus 207 ~l~~~~d~~~~l~ei~rvLkpGG~lii~~~~ 237 (299)
+++|++|+..++++++|+|||||.+++..++
T Consensus 98 ~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 98 FLLHMTTPETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp CGGGCSSHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred hhhcCCCHHHHHHHHHHHcCCCCEEEEEecc
Confidence 9999999999999999999999999988776
No 50
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.65 E-value=8.4e-17 Score=141.76 Aligned_cols=148 Identities=14% Similarity=0.077 Sum_probs=102.9
Q ss_pred cCCceeeccCcCCccccCCCCC-CCeEEEEeCCHHHHHhcCC------CCcEEEeccCCCCCCCCCCCCeeEEEeccccc
Q 022305 137 YYSEVFPPSNTPGVSHFPPGYK-QDRIVGMGMNEEELKRNPV------LTEYVVQDLNLNPKLPFEDNSFDVITNVVSVD 209 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~~~~~~~~-~~~v~gvD~S~~ml~~a~~------~~~~~~~D~~~~~~lpf~~~~FD~Vis~~~l~ 209 (299)
...+|||+|||+|......... ..+++|+|+|+.|++.+++ +++++++|+ ..+++++++||+|++..+++
T Consensus 93 ~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~---~~~~~~~~~fD~v~~~~~l~ 169 (254)
T 1xtp_A 93 GTSRALDCGAGIGRITKNLLTKLYATTDLLEPVKHMLEEAKRELAGMPVGKFILASM---ETATLPPNTYDLIVIQWTAI 169 (254)
T ss_dssp CCSEEEEETCTTTHHHHHTHHHHCSEEEEEESCHHHHHHHHHHTTTSSEEEEEESCG---GGCCCCSSCEEEEEEESCGG
T ss_pred CCCEEEEECCCcCHHHHHHHHhhcCEEEEEeCCHHHHHHHHHHhccCCceEEEEccH---HHCCCCCCCeEEEEEcchhh
Confidence 3568999999999733322211 4579999999999997764 377889999 77888889999999999999
Q ss_pred ccC--CHHHHHHHHHhhccCCcEEEEEecCcchHHHHHHhhhhcCCCch---hhhHHHHHHHhCCCCCCeeeecCCCCCC
Q 022305 210 YLT--KPIEVFKEMCQVLKPGGLAIVSFSNRCFWTKAISIWTSTGDADH---VMIVGAYFHYAGGYEPPQAVDISPNPGR 284 (299)
Q Consensus 210 ~~~--d~~~~l~ei~rvLkpGG~lii~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~aGF~~v~~~~~~~~~~~ 284 (299)
|++ ++..+|+++.++|||||.+++..+..... ..+........ ...+.+.+ ..+||+.+++.....-+..
T Consensus 170 ~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~l-~~aGf~~~~~~~~~~~~~~ 244 (254)
T 1xtp_A 170 YLTDADFVKFFKHCQQALTPNGYIFFKENCSTGD----RFLVDKEDSSLTRSDIHYKRLF-NESGVRVVKEAFQEEWPTD 244 (254)
T ss_dssp GSCHHHHHHHHHHHHHHEEEEEEEEEEEEBC--C----CEEEETTTTEEEBCHHHHHHHH-HHHTCCEEEEEECTTCCTT
T ss_pred hCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCcc----cceecccCCcccCCHHHHHHHH-HHCCCEEEEeeecCCCCch
Confidence 994 58899999999999999999986421100 00111111111 12233334 5589999998877665544
Q ss_pred CCCeEEEE
Q 022305 285 SDPMYVVY 292 (299)
Q Consensus 285 ~~p~~~v~ 292 (299)
..|...++
T Consensus 245 ~~~~~~~~ 252 (254)
T 1xtp_A 245 LFPLKMYA 252 (254)
T ss_dssp SCCEEEEE
T ss_pred hheEEEEE
Confidence 55554443
No 51
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.64 E-value=2.9e-16 Score=141.68 Aligned_cols=158 Identities=15% Similarity=0.070 Sum_probs=103.0
Q ss_pred cCCceeeccCcC---Ccccc--CCCCCCCeEEEEeCCHHHHHhcCC------CCcEEEeccCCCCCCC-----------C
Q 022305 137 YYSEVFPPSNTP---GVSHF--PPGYKQDRIVGMGMNEEELKRNPV------LTEYVVQDLNLNPKLP-----------F 194 (299)
Q Consensus 137 ~~~~vLDiGcG~---G~~~~--~~~~~~~~v~gvD~S~~ml~~a~~------~~~~~~~D~~~~~~lp-----------f 194 (299)
...+|||+|||+ |..+. ....++.+|+|+|+|+.|++.+++ +++++.+|+ .+.+ +
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~~~~v~~~~~D~---~~~~~~~~~~~~~~~~ 153 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAKDPNTAVFTADV---RDPEYILNHPDVRRMI 153 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTTCTTEEEEECCT---TCHHHHHHSHHHHHHC
T ss_pred CCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCCCCCeEEEEeeC---CCchhhhccchhhccC
Confidence 347899999999 85322 223467899999999999987764 378999998 4421 2
Q ss_pred CCCCeeEEEecccccccCC--HHHHHHHHHhhccCCcEEEEEecCcc---hHHHHHHhhhhcCCCchhhhHHHHHHHhCC
Q 022305 195 EDNSFDVITNVVSVDYLTK--PIEVFKEMCQVLKPGGLAIVSFSNRC---FWTKAISIWTSTGDADHVMIVGAYFHYAGG 269 (299)
Q Consensus 195 ~~~~FD~Vis~~~l~~~~d--~~~~l~ei~rvLkpGG~lii~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~aG 269 (299)
+.++||+|++..++||+++ +..+|++++++|||||+|+++..... ........|.......+.+-..++-..-.|
T Consensus 154 d~~~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ei~~~l~G 233 (274)
T 2qe6_A 154 DFSRPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPGSYLFMTSLVDTGLPAQQKLARITRENLGEGWARTPEEIERQFGD 233 (274)
T ss_dssp CTTSCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTTCEEEEEEEBCSSCHHHHHHHHHHHHHHSCCCCBCHHHHHHTTTT
T ss_pred CCCCCEEEEEechhhhCCcHHHHHHHHHHHHhCCCCcEEEEEEecCcchHHHHHHHHHHHhcCCCCccCCHHHHHHHhCC
Confidence 3358999999999999987 89999999999999999998865532 222233333322111122222222222268
Q ss_pred CCCCe--eeec---CCC-C-CC--CC----CeEEEEEEecC
Q 022305 270 YEPPQ--AVDI---SPN-P-GR--SD----PMYVVYSRKAS 297 (299)
Q Consensus 270 F~~v~--~~~~---~~~-~-~~--~~----p~~~v~arK~~ 297 (299)
|+.++ ++.+ .+. + .. .+ ..|..+|||++
T Consensus 234 ~~l~~~g~~~~~~w~p~~~~~~~~~~~~~~~~~~~v~rk~~ 274 (274)
T 2qe6_A 234 FELVEPGVVYTALWRPDEPVDPDNLSPGEQLGMAGIGRKKA 274 (274)
T ss_dssp CEECTTCSEEGGGSSCSSCCCTTSCCGGGGSEEEEEEECCC
T ss_pred CeEccCcEeccccccCCCCCccccCCccceeEEEEEEecCC
Confidence 87665 2222 121 1 11 12 26999999974
No 52
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.64 E-value=5.2e-16 Score=133.25 Aligned_cols=98 Identities=14% Similarity=0.134 Sum_probs=82.2
Q ss_pred cCCceeeccCcCCccccCCCCCCCeEEEEeCCHHHHHhcCC----CCcEEEeccCCCCCCCCCCCCeeEEEecccccccC
Q 022305 137 YYSEVFPPSNTPGVSHFPPGYKQDRIVGMGMNEEELKRNPV----LTEYVVQDLNLNPKLPFEDNSFDVITNVVSVDYLT 212 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~~~~~~~~~~~v~gvD~S~~ml~~a~~----~~~~~~~D~~~~~~lpf~~~~FD~Vis~~~l~~~~ 212 (299)
...+|||+|||+|.........+.+++|+|+|+.|++.+++ +++++.+|+ ..+ +++++||+|++..+++|++
T Consensus 46 ~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~d~---~~~-~~~~~~D~v~~~~~l~~~~ 121 (218)
T 3ou2_A 46 IRGDVLELASGTGYWTRHLSGLADRVTALDGSAEMIAEAGRHGLDNVEFRQQDL---FDW-TPDRQWDAVFFAHWLAHVP 121 (218)
T ss_dssp SCSEEEEESCTTSHHHHHHHHHSSEEEEEESCHHHHHHHGGGCCTTEEEEECCT---TSC-CCSSCEEEEEEESCGGGSC
T ss_pred CCCeEEEECCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHhcCCCCeEEEeccc---ccC-CCCCceeEEEEechhhcCC
Confidence 34689999999997333222236799999999999998764 478999999 666 7789999999999999999
Q ss_pred CH--HHHHHHHHhhccCCcEEEEEecCc
Q 022305 213 KP--IEVFKEMCQVLKPGGLAIVSFSNR 238 (299)
Q Consensus 213 d~--~~~l~ei~rvLkpGG~lii~~~~~ 238 (299)
++ ..+++++.++|||||.+++...+.
T Consensus 122 ~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 149 (218)
T 3ou2_A 122 DDRFEAFWESVRSAVAPGGVVEFVDVTD 149 (218)
T ss_dssp HHHHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred HHHHHHHHHHHHHHcCCCeEEEEEeCCC
Confidence 86 899999999999999998887654
No 53
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.64 E-value=3.9e-17 Score=140.58 Aligned_cols=95 Identities=12% Similarity=0.029 Sum_probs=77.0
Q ss_pred cCCceeeccCcCCccccCCCCCCCeEEEEeCCHHHHHhcCC--------------------CCcEEEeccCCCCCCCCCC
Q 022305 137 YYSEVFPPSNTPGVSHFPPGYKQDRIVGMGMNEEELKRNPV--------------------LTEYVVQDLNLNPKLPFED 196 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~~~~~~~~~~~v~gvD~S~~ml~~a~~--------------------~~~~~~~D~~~~~~lpf~~ 196 (299)
...+|||+|||+|.........+.+|+|+|+|+.|++.|++ +++++++|+ .++++++
T Consensus 22 ~~~~vLD~GCG~G~~~~~la~~g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~---~~l~~~~ 98 (203)
T 1pjz_A 22 PGARVLVPLCGKSQDMSWLSGQGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDF---FALTARD 98 (203)
T ss_dssp TTCEEEETTTCCSHHHHHHHHHCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECC---SSSTHHH
T ss_pred CCCEEEEeCCCCcHhHHHHHHCCCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECcc---ccCCccc
Confidence 45789999999997433333346799999999999986642 478999999 8888876
Q ss_pred -CCeeEEEecccccccCC--HHHHHHHHHhhccCCcEEEEE
Q 022305 197 -NSFDVITNVVSVDYLTK--PIEVFKEMCQVLKPGGLAIVS 234 (299)
Q Consensus 197 -~~FD~Vis~~~l~~~~d--~~~~l~ei~rvLkpGG~lii~ 234 (299)
++||+|++..+++|++. ...++++++|+|||||.+++.
T Consensus 99 ~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~ 139 (203)
T 1pjz_A 99 IGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLI 139 (203)
T ss_dssp HHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEE
T ss_pred CCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEE
Confidence 89999999999999964 456999999999999974443
No 54
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.63 E-value=3.8e-16 Score=136.54 Aligned_cols=144 Identities=15% Similarity=0.150 Sum_probs=101.1
Q ss_pred CceeeccCcCCccccCCCCCCCeEEEEeCCHHHHHhcCC---------CCcEEEeccCCCCCCCCCCCCeeEEEeccccc
Q 022305 139 SEVFPPSNTPGVSHFPPGYKQDRIVGMGMNEEELKRNPV---------LTEYVVQDLNLNPKLPFEDNSFDVITNVVSVD 209 (299)
Q Consensus 139 ~~vLDiGcG~G~~~~~~~~~~~~v~gvD~S~~ml~~a~~---------~~~~~~~D~~~~~~lpf~~~~FD~Vis~~~l~ 209 (299)
.+|||+|||+|........++.+|+|+|+|+.|++.+++ +++++++|+ ..++ ++++||+|++..+++
T Consensus 68 ~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~---~~~~-~~~~fD~v~~~~~l~ 143 (235)
T 3lcc_A 68 GRALVPGCGGGHDVVAMASPERFVVGLDISESALAKANETYGSSPKAEYFSFVKEDV---FTWR-PTELFDLIFDYVFFC 143 (235)
T ss_dssp EEEEEETCTTCHHHHHHCBTTEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCT---TTCC-CSSCEEEEEEESSTT
T ss_pred CCEEEeCCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHHHhhccCCCcceEEEECch---hcCC-CCCCeeEEEEChhhh
Confidence 589999999997444444467899999999999987654 267999999 6666 456899999999999
Q ss_pred ccC--CHHHHHHHHHhhccCCcEEEEEecCcchHHHHHHhhhhcCCC--chhhhHHHHHHHhCCCCCCeeeecCCCC--C
Q 022305 210 YLT--KPIEVFKEMCQVLKPGGLAIVSFSNRCFWTKAISIWTSTGDA--DHVMIVGAYFHYAGGYEPPQAVDISPNP--G 283 (299)
Q Consensus 210 ~~~--d~~~~l~ei~rvLkpGG~lii~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~aGF~~v~~~~~~~~~--~ 283 (299)
|++ ++..+++++.++|||||.+++...+.... ..+.. .....+.+.+ ..+||+.+++....... .
T Consensus 144 ~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~--------~~~~~~~~~~~~~~~~l-~~~Gf~~~~~~~~~~~~~~~ 214 (235)
T 3lcc_A 144 AIEPEMRPAWAKSMYELLKPDGELITLMYPITDH--------VGGPPYKVDVSTFEEVL-VPIGFKAVSVEENPHAIPTR 214 (235)
T ss_dssp TSCGGGHHHHHHHHHHHEEEEEEEEEEECCCSCC--------CSCSSCCCCHHHHHHHH-GGGTEEEEEEEECTTCCTTT
T ss_pred cCCHHHHHHHHHHHHHHCCCCcEEEEEEeccccc--------CCCCCccCCHHHHHHHH-HHcCCeEEEEEecCCccccc
Confidence 998 89999999999999999888765432200 00000 0112233333 56899999888775432 2
Q ss_pred CCCCeEEEEEEe
Q 022305 284 RSDPMYVVYSRK 295 (299)
Q Consensus 284 ~~~p~~~v~arK 295 (299)
.....+...++.
T Consensus 215 ~g~e~~~~~~~~ 226 (235)
T 3lcc_A 215 KGKEKLGRWKKI 226 (235)
T ss_dssp TTSCEEEEEEES
T ss_pred cCHHHHhhhhhc
Confidence 223344444443
No 55
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.63 E-value=1.4e-16 Score=144.40 Aligned_cols=133 Identities=11% Similarity=0.080 Sum_probs=87.2
Q ss_pred CceeeccCcCCcc------ccCCCCCCCeE--EEEeCCHHHHHhcCCC---------CcEE--EeccCCCCCCC------
Q 022305 139 SEVFPPSNTPGVS------HFPPGYKQDRI--VGMGMNEEELKRNPVL---------TEYV--VQDLNLNPKLP------ 193 (299)
Q Consensus 139 ~~vLDiGcG~G~~------~~~~~~~~~~v--~gvD~S~~ml~~a~~~---------~~~~--~~D~~~~~~lp------ 193 (299)
.+|||+|||+|.. .+....++..+ +|+|+|++|++.++++ +.+. .++. +.++
T Consensus 54 ~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~---~~~~~~~~~~ 130 (292)
T 2aot_A 54 IKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETS---SEYQSRMLEK 130 (292)
T ss_dssp EEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCH---HHHHHHHHTT
T ss_pred CeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecch---hhhhhhhccc
Confidence 4799999999942 11222245544 9999999999876542 2332 3343 3333
Q ss_pred CCCCCeeEEEecccccccCCHHHHHHHHHhhccCCcEEEEEecCc-chHHHHHHh-hhhcCCCchh-----hhHHHHHHH
Q 022305 194 FEDNSFDVITNVVSVDYLTKPIEVFKEMCQVLKPGGLAIVSFSNR-CFWTKAISI-WTSTGDADHV-----MIVGAYFHY 266 (299)
Q Consensus 194 f~~~~FD~Vis~~~l~~~~d~~~~l~ei~rvLkpGG~lii~~~~~-~~~~~~~~~-~~~~~~~~~~-----~~~~~~~~~ 266 (299)
+++++||+|++.+++||++|+.++|++++|+|||||.+++.+.+. ..+...+.. |.......+. .-+...+ .
T Consensus 131 ~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~ 209 (292)
T 2aot_A 131 KELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTNAKMLIIVVSGSSGWDKLWKKYGSRFPQDDLCQYITSDDLTQML-D 209 (292)
T ss_dssp TCCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEEECTTSHHHHHHHHHGGGSCCCTTCCCCCHHHHHHHH-H
T ss_pred cCCCceeEEEEeeeeeecCCHHHHHHHHHHHcCCCcEEEEEEecCCccHHHHHHHHHHhccCCCcccCCCHHHHHHHH-H
Confidence 668999999999999999999999999999999999988876553 333333322 2222111111 1222333 5
Q ss_pred hCCCCCCee
Q 022305 267 AGGYEPPQA 275 (299)
Q Consensus 267 ~aGF~~v~~ 275 (299)
.+||+.+..
T Consensus 210 ~aGf~~~~~ 218 (292)
T 2aot_A 210 NLGLKYECY 218 (292)
T ss_dssp HHTCCEEEE
T ss_pred HCCCceEEE
Confidence 689987653
No 56
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.62 E-value=2.8e-16 Score=134.02 Aligned_cols=132 Identities=11% Similarity=0.097 Sum_probs=92.0
Q ss_pred ceeeccCcCCccccCCCCCCCeEEEEeCCHHHHHhcCC-------CCcEEEeccCCCCCCCCCCCCeeEEEecccccccC
Q 022305 140 EVFPPSNTPGVSHFPPGYKQDRIVGMGMNEEELKRNPV-------LTEYVVQDLNLNPKLPFEDNSFDVITNVVSVDYLT 212 (299)
Q Consensus 140 ~vLDiGcG~G~~~~~~~~~~~~v~gvD~S~~ml~~a~~-------~~~~~~~D~~~~~~lpf~~~~FD~Vis~~~l~~~~ 212 (299)
+|||+|||+|.........+.+++|+|+|+.|++.+++ +++++.+|+ ..+++++++||+|+++....+..
T Consensus 32 ~vLdiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~---~~~~~~~~~fD~v~~~~~~~~~~ 108 (202)
T 2kw5_A 32 KILCLAEGEGRNACFLASLGYEVTAVDQSSVGLAKAKQLAQEKGVKITTVQSNL---ADFDIVADAWEGIVSIFCHLPSS 108 (202)
T ss_dssp EEEECCCSCTHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHHTCCEEEECCBT---TTBSCCTTTCSEEEEECCCCCHH
T ss_pred CEEEECCCCCHhHHHHHhCCCeEEEEECCHHHHHHHHHHHHhcCCceEEEEcCh---hhcCCCcCCccEEEEEhhcCCHH
Confidence 99999999997333332236799999999999987765 367888999 78888889999999964322234
Q ss_pred CHHHHHHHHHhhccCCcEEEEEecCcchHHHHHHhhhhcCCCchhhh--HHHHHHHhCCCCCCeeeecC
Q 022305 213 KPIEVFKEMCQVLKPGGLAIVSFSNRCFWTKAISIWTSTGDADHVMI--VGAYFHYAGGYEPPQAVDIS 279 (299)
Q Consensus 213 d~~~~l~ei~rvLkpGG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~aGF~~v~~~~~~ 279 (299)
++..+++++.++|||||.+++.+.+..... +.......+..+ ..++...-.||+.+++....
T Consensus 109 ~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~l~Gf~v~~~~~~~ 172 (202)
T 2kw5_A 109 LRQQLYPKVYQGLKPGGVFILEGFAPEQLQ-----YNTGGPKDLDLLPKLETLQSELPSLNWLIANNLE 172 (202)
T ss_dssp HHHHHHHHHHTTCCSSEEEEEEEECTTTGG-----GTSCCSSSGGGCCCHHHHHHHCSSSCEEEEEEEE
T ss_pred HHHHHHHHHHHhcCCCcEEEEEEecccccc-----CCCCCCCcceeecCHHHHHHHhcCceEEEEEEEE
Confidence 788999999999999999999877654322 111111111111 12222222399998877764
No 57
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.62 E-value=2.4e-16 Score=143.05 Aligned_cols=95 Identities=14% Similarity=0.213 Sum_probs=81.6
Q ss_pred hhcCCceeeccCcCCccccCCC---CCCCeEEEEeCCHHHHHhcCC----------CCcEEEeccCCCCCCCCCC-----
Q 022305 135 TKYYSEVFPPSNTPGVSHFPPG---YKQDRIVGMGMNEEELKRNPV----------LTEYVVQDLNLNPKLPFED----- 196 (299)
Q Consensus 135 ~~~~~~vLDiGcG~G~~~~~~~---~~~~~v~gvD~S~~ml~~a~~----------~~~~~~~D~~~~~~lpf~~----- 196 (299)
.....+|||+|||+|....... .++.+|+|+|+|+.|++.+++ +++++++|+ +.+++++
T Consensus 34 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~---~~~~~~~~~~~~ 110 (299)
T 3g5t_A 34 DGERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSS---DDFKFLGADSVD 110 (299)
T ss_dssp CSCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCT---TCCGGGCTTTTT
T ss_pred cCCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCH---HhCCcccccccc
Confidence 3456789999999997433332 367899999999999987643 588999999 8888877
Q ss_pred -CCeeEEEecccccccCCHHHHHHHHHhhccCCcEEEE
Q 022305 197 -NSFDVITNVVSVDYLTKPIEVFKEMCQVLKPGGLAIV 233 (299)
Q Consensus 197 -~~FD~Vis~~~l~~~~d~~~~l~ei~rvLkpGG~lii 233 (299)
++||+|++..++||+ ++..+++++.|+|||||.+++
T Consensus 111 ~~~fD~V~~~~~l~~~-~~~~~l~~~~~~LkpgG~l~i 147 (299)
T 3g5t_A 111 KQKIDMITAVECAHWF-DFEKFQRSAYANLRKDGTIAI 147 (299)
T ss_dssp SSCEEEEEEESCGGGS-CHHHHHHHHHHHEEEEEEEEE
T ss_pred CCCeeEEeHhhHHHHh-CHHHHHHHHHHhcCCCcEEEE
Confidence 899999999999999 999999999999999998877
No 58
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.62 E-value=2.3e-16 Score=133.57 Aligned_cols=94 Identities=18% Similarity=0.208 Sum_probs=78.3
Q ss_pred cCCceeeccCcCCccccCCCCCCCeEEEEeCCHHHHHhcCC--------CCcEEEeccCCCCCCCCCCCCeeEEEecccc
Q 022305 137 YYSEVFPPSNTPGVSHFPPGYKQDRIVGMGMNEEELKRNPV--------LTEYVVQDLNLNPKLPFEDNSFDVITNVVSV 208 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~~~~~~~~~~~v~gvD~S~~ml~~a~~--------~~~~~~~D~~~~~~lpf~~~~FD~Vis~~~l 208 (299)
...+|||+|||+|.........+.+++|+|+|+.|++.+++ +++++.+|+ ..+++ +++||+|++..++
T Consensus 32 ~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~---~~~~~-~~~~D~v~~~~~l 107 (199)
T 2xvm_A 32 KPGKTLDLGCGNGRNSLYLAANGYDVDAWDKNAMSIANVERIKSIENLDNLHTRVVDL---NNLTF-DRQYDFILSTVVL 107 (199)
T ss_dssp CSCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCG---GGCCC-CCCEEEEEEESCG
T ss_pred CCCeEEEEcCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcch---hhCCC-CCCceEEEEcchh
Confidence 34689999999997333222236799999999999987654 478899999 77787 8899999999999
Q ss_pred cccC--CHHHHHHHHHhhccCCcEEEEE
Q 022305 209 DYLT--KPIEVFKEMCQVLKPGGLAIVS 234 (299)
Q Consensus 209 ~~~~--d~~~~l~ei~rvLkpGG~lii~ 234 (299)
+|++ ++..+++++.++|||||.+++.
T Consensus 108 ~~~~~~~~~~~l~~~~~~L~~gG~l~~~ 135 (199)
T 2xvm_A 108 MFLEAKTIPGLIANMQRCTKPGGYNLIV 135 (199)
T ss_dssp GGSCGGGHHHHHHHHHHTEEEEEEEEEE
T ss_pred hhCCHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 9997 8899999999999999987654
No 59
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.62 E-value=3e-16 Score=135.80 Aligned_cols=97 Identities=29% Similarity=0.372 Sum_probs=80.8
Q ss_pred CCceeeccCcCCccccCCCCCCCeEEEEeCCHHHHHhcCC-------CCcEEEeccCCCCCCCCCCCCeeEEEeccc--c
Q 022305 138 YSEVFPPSNTPGVSHFPPGYKQDRIVGMGMNEEELKRNPV-------LTEYVVQDLNLNPKLPFEDNSFDVITNVVS--V 208 (299)
Q Consensus 138 ~~~vLDiGcG~G~~~~~~~~~~~~v~gvD~S~~ml~~a~~-------~~~~~~~D~~~~~~lpf~~~~FD~Vis~~~--l 208 (299)
..+|||+|||+|.........+.+++|+|+|+.|++.+++ +++++.+|+ ..+++++++||+|+++.+ +
T Consensus 39 ~~~vLDlG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~---~~~~~~~~~~D~v~~~~~~~~ 115 (227)
T 1ve3_A 39 RGKVLDLACGVGGFSFLLEDYGFEVVGVDISEDMIRKAREYAKSRESNVEFIVGDA---RKLSFEDKTFDYVIFIDSIVH 115 (227)
T ss_dssp CCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCT---TSCCSCTTCEEEEEEESCGGG
T ss_pred CCeEEEEeccCCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCCceEEECch---hcCCCCCCcEEEEEEcCchHh
Confidence 5789999999997333322234499999999999987654 478999999 778888899999999999 6
Q ss_pred cccCCHHHHHHHHHhhccCCcEEEEEecC
Q 022305 209 DYLTKPIEVFKEMCQVLKPGGLAIVSFSN 237 (299)
Q Consensus 209 ~~~~d~~~~l~ei~rvLkpGG~lii~~~~ 237 (299)
+|.+++..+++++.++|||||.+++..++
T Consensus 116 ~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 144 (227)
T 1ve3_A 116 FEPLELNQVFKEVRRVLKPSGKFIMYFTD 144 (227)
T ss_dssp CCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCHHHHHHHHHHHHHHcCCCcEEEEEecC
Confidence 66668899999999999999999998776
No 60
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.61 E-value=3.9e-16 Score=142.68 Aligned_cols=136 Identities=15% Similarity=0.154 Sum_probs=98.4
Q ss_pred CCceeeccCcCCccccCCCCC-CCeEEEEeCCHHHHHhcCC---------CCcEEEeccCCCCCCCCCCCCeeEEEeccc
Q 022305 138 YSEVFPPSNTPGVSHFPPGYK-QDRIVGMGMNEEELKRNPV---------LTEYVVQDLNLNPKLPFEDNSFDVITNVVS 207 (299)
Q Consensus 138 ~~~vLDiGcG~G~~~~~~~~~-~~~v~gvD~S~~ml~~a~~---------~~~~~~~D~~~~~~lpf~~~~FD~Vis~~~ 207 (299)
..+|||+|||+|......... +.+|+|+|+|+.|++.+++ +++++.+|+ ..+++++++||+|++..+
T Consensus 118 ~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~---~~~~~~~~~fD~V~~~~~ 194 (312)
T 3vc1_A 118 DDTLVDAGCGRGGSMVMAHRRFGSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNM---LDTPFDKGAVTASWNNES 194 (312)
T ss_dssp TCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCT---TSCCCCTTCEEEEEEESC
T ss_pred CCEEEEecCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECCh---hcCCCCCCCEeEEEECCc
Confidence 358999999999733322222 6799999999999987764 378999999 888999999999999999
Q ss_pred ccccCCHHHHHHHHHhhccCCcEEEEEecCcch-------HHHHHHhhhhcCCCchhhhHHHHHHHhCCCCCCeeeecC
Q 022305 208 VDYLTKPIEVFKEMCQVLKPGGLAIVSFSNRCF-------WTKAISIWTSTGDADHVMIVGAYFHYAGGYEPPQAVDIS 279 (299)
Q Consensus 208 l~~~~d~~~~l~ei~rvLkpGG~lii~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~aGF~~v~~~~~~ 279 (299)
++|+ ++..+|+++.|+|||||.+++..+.... +...+...... .......+.+.+ +++||+.+++.++.
T Consensus 195 l~~~-~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~~~~l-~~aGf~~~~~~~~~ 270 (312)
T 3vc1_A 195 TMYV-DLHDLFSEHSRFLKVGGRYVTITGCWNPRYGQPSKWVSQINAHFEC-NIHSRREYLRAM-ADNRLVPHTIVDLT 270 (312)
T ss_dssp GGGS-CHHHHHHHHHHHEEEEEEEEEEEEEECTTTCSCCHHHHHHHHHHTC-CCCBHHHHHHHH-HTTTEEEEEEEECH
T ss_pred hhhC-CHHHHHHHHHHHcCCCcEEEEEEccccccccchhHHHHHHHhhhcC-CCCCHHHHHHHH-HHCCCEEEEEEeCC
Confidence 9999 6999999999999999998887543211 11111111111 111122333334 56999999998874
No 61
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.61 E-value=5.5e-16 Score=136.60 Aligned_cols=100 Identities=15% Similarity=0.022 Sum_probs=77.2
Q ss_pred HHHhhhcCCceeeccCcCCccccC-CCCCCCeEEEEeCCHHHHHhcCCC-------CcEEEeccCCCCCC--CCCCCCee
Q 022305 131 IAALTKYYSEVFPPSNTPGVSHFP-PGYKQDRIVGMGMNEEELKRNPVL-------TEYVVQDLNLNPKL--PFEDNSFD 200 (299)
Q Consensus 131 ~~~l~~~~~~vLDiGcG~G~~~~~-~~~~~~~v~gvD~S~~ml~~a~~~-------~~~~~~D~~~~~~l--pf~~~~FD 200 (299)
.+.+.....+|||||||.|..... ......+++|||+|+.|++.|+++ ++++.+|. +.+ ++++++||
T Consensus 54 a~~~~~~G~rVLdiG~G~G~~~~~~~~~~~~~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~~a---~~~~~~~~~~~FD 130 (236)
T 3orh_A 54 AAAASSKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLW---EDVAPTLPDGHFD 130 (236)
T ss_dssp HHHHTTTCEEEEEECCTTSHHHHHHTTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCH---HHHGGGSCTTCEE
T ss_pred HHhhccCCCeEEEECCCccHHHHHHHHhCCcEEEEEeCCHHHHHHHHHHHhhCCCceEEEeehH---HhhcccccccCCc
Confidence 344455667999999999963322 223346899999999999987652 56777776 332 57889999
Q ss_pred EEE-----ecccccccCCHHHHHHHHHhhccCCcEEEE
Q 022305 201 VIT-----NVVSVDYLTKPIEVFKEMCQVLKPGGLAIV 233 (299)
Q Consensus 201 ~Vi-----s~~~l~~~~d~~~~l~ei~rvLkpGG~lii 233 (299)
.|+ +..+++|+.++..+++|++|+|||||.|++
T Consensus 131 ~i~~D~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f 168 (236)
T 3orh_A 131 GILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTY 168 (236)
T ss_dssp EEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEE
T ss_pred eEEEeeeecccchhhhcchhhhhhhhhheeCCCCEEEE
Confidence 997 466788889999999999999999998876
No 62
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.61 E-value=3.1e-15 Score=128.83 Aligned_cols=127 Identities=19% Similarity=0.124 Sum_probs=96.2
Q ss_pred cCCceeeccCcCCccccCCCCCCCeEEEEeCCHHHHHhcCCCCcEEEeccCCCCCCCCCCCCeeEEEecccccccCCHHH
Q 022305 137 YYSEVFPPSNTPGVSHFPPGYKQDRIVGMGMNEEELKRNPVLTEYVVQDLNLNPKLPFEDNSFDVITNVVSVDYLTKPIE 216 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~~~~~~~~~~~v~gvD~S~~ml~~a~~~~~~~~~D~~~~~~lpf~~~~FD~Vis~~~l~~~~d~~~ 216 (299)
...+|||+|||+|...... ..+++|+|+|+. .++++.+|+ ..+++++++||+|++..++|| .++..
T Consensus 67 ~~~~vLDiG~G~G~~~~~l---~~~v~~~D~s~~-------~~~~~~~d~---~~~~~~~~~fD~v~~~~~l~~-~~~~~ 132 (215)
T 2zfu_A 67 ASLVVADFGCGDCRLASSI---RNPVHCFDLASL-------DPRVTVCDM---AQVPLEDESVDVAVFCLSLMG-TNIRD 132 (215)
T ss_dssp TTSCEEEETCTTCHHHHHC---CSCEEEEESSCS-------STTEEESCT---TSCSCCTTCEEEEEEESCCCS-SCHHH
T ss_pred CCCeEEEECCcCCHHHHHh---hccEEEEeCCCC-------CceEEEecc---ccCCCCCCCEeEEEEehhccc-cCHHH
Confidence 3468999999999643332 278999999998 588999999 788999999999999999975 89999
Q ss_pred HHHHHHhhccCCcEEEEEecCcchHHHHHHhhhhcCCCchhhhHHHHHHHhCCCCCCeeeecCCCCCCCCCeEEEEEEec
Q 022305 217 VFKEMCQVLKPGGLAIVSFSNRCFWTKAISIWTSTGDADHVMIVGAYFHYAGGYEPPQAVDISPNPGRSDPMYVVYSRKA 296 (299)
Q Consensus 217 ~l~ei~rvLkpGG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aGF~~v~~~~~~~~~~~~~p~~~v~arK~ 296 (299)
+++++.++|||||.+++........ ....+...+ ..+||+.++... ....+++++++|.
T Consensus 133 ~l~~~~~~L~~gG~l~i~~~~~~~~--------------~~~~~~~~l-~~~Gf~~~~~~~------~~~~~~~~~~~k~ 191 (215)
T 2zfu_A 133 FLEEANRVLKPGGLLKVAEVSSRFE--------------DVRTFLRAV-TKLGFKIVSKDL------TNSHFFLFDFQKT 191 (215)
T ss_dssp HHHHHHHHEEEEEEEEEEECGGGCS--------------CHHHHHHHH-HHTTEEEEEEEC------CSTTCEEEEEEEC
T ss_pred HHHHHHHhCCCCeEEEEEEcCCCCC--------------CHHHHHHHH-HHCCCEEEEEec------CCCeEEEEEEEec
Confidence 9999999999999998875432110 112233344 458998776432 1245788999987
Q ss_pred CC
Q 022305 297 ST 298 (299)
Q Consensus 297 ~~ 298 (299)
+.
T Consensus 192 ~~ 193 (215)
T 2zfu_A 192 GP 193 (215)
T ss_dssp SS
T ss_pred Cc
Confidence 54
No 63
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.60 E-value=3.4e-16 Score=138.28 Aligned_cols=97 Identities=16% Similarity=0.305 Sum_probs=83.6
Q ss_pred cCCceeeccCcCCccc--cCCCCCCCeEEEEeCCHHHHHhcCC---CCcEEEeccCCCCCCCCCCCCeeEEEeccccccc
Q 022305 137 YYSEVFPPSNTPGVSH--FPPGYKQDRIVGMGMNEEELKRNPV---LTEYVVQDLNLNPKLPFEDNSFDVITNVVSVDYL 211 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~~--~~~~~~~~~v~gvD~S~~ml~~a~~---~~~~~~~D~~~~~~lpf~~~~FD~Vis~~~l~~~ 211 (299)
...+|||+|||+|... +....++.+++|+|+|+.|++.+++ +++++.+|+ +.++ ++++||+|+++.+++|+
T Consensus 33 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~d~---~~~~-~~~~fD~v~~~~~l~~~ 108 (259)
T 2p35_A 33 RVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADRLPNTNFGKADL---ATWK-PAQKADLLYANAVFQWV 108 (259)
T ss_dssp CCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHHSTTSEEEECCT---TTCC-CSSCEEEEEEESCGGGS
T ss_pred CCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhCCCcEEEECCh---hhcC-ccCCcCEEEEeCchhhC
Confidence 3468999999999632 2223357899999999999998864 589999999 7788 78899999999999999
Q ss_pred CCHHHHHHHHHhhccCCcEEEEEecC
Q 022305 212 TKPIEVFKEMCQVLKPGGLAIVSFSN 237 (299)
Q Consensus 212 ~d~~~~l~ei~rvLkpGG~lii~~~~ 237 (299)
+|+..+++++.++|||||.+++.+++
T Consensus 109 ~~~~~~l~~~~~~L~pgG~l~~~~~~ 134 (259)
T 2p35_A 109 PDHLAVLSQLMDQLESGGVLAVQMPD 134 (259)
T ss_dssp TTHHHHHHHHGGGEEEEEEEEEEEEC
T ss_pred CCHHHHHHHHHHhcCCCeEEEEEeCC
Confidence 99999999999999999999998765
No 64
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.60 E-value=6.6e-16 Score=133.39 Aligned_cols=95 Identities=11% Similarity=0.042 Sum_probs=78.9
Q ss_pred cCCceeeccCcCCcccc--CCCCCCCeEEEEeCCHHHHHhcCC-------------CCcEEEeccCCCCCCCCCCCCeeE
Q 022305 137 YYSEVFPPSNTPGVSHF--PPGYKQDRIVGMGMNEEELKRNPV-------------LTEYVVQDLNLNPKLPFEDNSFDV 201 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~~~--~~~~~~~~v~gvD~S~~ml~~a~~-------------~~~~~~~D~~~~~~lpf~~~~FD~ 201 (299)
...+|||+|||+|.... ....+..+++|+|+|+.|++.+++ +++++++|+ ..+++++++||+
T Consensus 29 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~---~~~~~~~~~fD~ 105 (217)
T 3jwh_A 29 NARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGAL---TYQDKRFHGYDA 105 (217)
T ss_dssp TCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCT---TSCCGGGCSCSE
T ss_pred CCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCc---ccccccCCCcCE
Confidence 45789999999997332 333345799999999999997754 378899998 777888889999
Q ss_pred EEecccccccCCH--HHHHHHHHhhccCCcEEEEE
Q 022305 202 ITNVVSVDYLTKP--IEVFKEMCQVLKPGGLAIVS 234 (299)
Q Consensus 202 Vis~~~l~~~~d~--~~~l~ei~rvLkpGG~lii~ 234 (299)
|++..+++|++++ .++++++.++|||||.+++.
T Consensus 106 v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~li~~ 140 (217)
T 3jwh_A 106 ATVIEVIEHLDLSRLGAFERVLFEFAQPKIVIVTT 140 (217)
T ss_dssp EEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEE
T ss_pred EeeHHHHHcCCHHHHHHHHHHHHHHcCCCEEEEEc
Confidence 9999999999866 89999999999999966654
No 65
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.60 E-value=3.2e-16 Score=134.05 Aligned_cols=97 Identities=23% Similarity=0.292 Sum_probs=82.6
Q ss_pred CCceeeccCcCCccc-cCCCCCCCeEEEEeCCHHHHHhcCC-------CCcEEEeccCCCCCCCCCCCCeeEEEeccccc
Q 022305 138 YSEVFPPSNTPGVSH-FPPGYKQDRIVGMGMNEEELKRNPV-------LTEYVVQDLNLNPKLPFEDNSFDVITNVVSVD 209 (299)
Q Consensus 138 ~~~vLDiGcG~G~~~-~~~~~~~~~v~gvD~S~~ml~~a~~-------~~~~~~~D~~~~~~lpf~~~~FD~Vis~~~l~ 209 (299)
..+|||+|||+|... ......+.+++|+|+|+.|++.+++ +++++++|+ ..+++++++||+|++..+++
T Consensus 24 ~~~vLDiGcG~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~---~~~~~~~~~fD~v~~~~~l~ 100 (209)
T 2p8j_A 24 DKTVLDCGAGGDLPPLSIFVEDGYKTYGIEISDLQLKKAENFSRENNFKLNISKGDI---RKLPFKDESMSFVYSYGTIF 100 (209)
T ss_dssp CSEEEEESCCSSSCTHHHHHHTTCEEEEEECCHHHHHHHHHHHHHHTCCCCEEECCT---TSCCSCTTCEEEEEECSCGG
T ss_pred CCEEEEECCCCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEECch---hhCCCCCCceeEEEEcChHH
Confidence 478999999999642 2223356799999999999987664 378999999 78899899999999999999
Q ss_pred cc--CCHHHHHHHHHhhccCCcEEEEEecC
Q 022305 210 YL--TKPIEVFKEMCQVLKPGGLAIVSFSN 237 (299)
Q Consensus 210 ~~--~d~~~~l~ei~rvLkpGG~lii~~~~ 237 (299)
|+ +++..+++++.++|||||.+++.+.+
T Consensus 101 ~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 130 (209)
T 2p8j_A 101 HMRKNDVKEAIDEIKRVLKPGGLACINFLT 130 (209)
T ss_dssp GSCHHHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred hCCHHHHHHHHHHHHHHcCCCcEEEEEEec
Confidence 99 68899999999999999999998654
No 66
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.60 E-value=5.6e-16 Score=137.81 Aligned_cols=100 Identities=20% Similarity=0.198 Sum_probs=83.6
Q ss_pred cCCceeeccCcCCccccCCCCCCCeEEEEeCCHHHHHhcCCCC--cEEEeccCCCCCCCCCCCCeeEEEeccccccc-CC
Q 022305 137 YYSEVFPPSNTPGVSHFPPGYKQDRIVGMGMNEEELKRNPVLT--EYVVQDLNLNPKLPFEDNSFDVITNVVSVDYL-TK 213 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~~~~~~~~~~~v~gvD~S~~ml~~a~~~~--~~~~~D~~~~~~lpf~~~~FD~Vis~~~l~~~-~d 213 (299)
...+|||+|||+|.........+.+++|+|+|+.|++.++++. .++++|+ ..+++++++||+|++..+++|+ ++
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~d~---~~~~~~~~~fD~v~~~~~~~~~~~~ 130 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQERGFEVVLVDPSKEMLEVAREKGVKNVVEAKA---EDLPFPSGAFEAVLALGDVLSYVEN 130 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHHTTTCEEEEEESCHHHHHHHHHHTCSCEEECCT---TSCCSCTTCEEEEEECSSHHHHCSC
T ss_pred CCCeEEEeCCCcCHHHHHHHHcCCeEEEEeCCHHHHHHHHhhcCCCEEECcH---HHCCCCCCCEEEEEEcchhhhcccc
Confidence 5578999999999743333333679999999999999877642 4889999 8889989999999999877666 78
Q ss_pred HHHHHHHHHhhccCCcEEEEEecCcc
Q 022305 214 PIEVFKEMCQVLKPGGLAIVSFSNRC 239 (299)
Q Consensus 214 ~~~~l~ei~rvLkpGG~lii~~~~~~ 239 (299)
+..+|+++.++|||||.+++.+++..
T Consensus 131 ~~~~l~~~~~~LkpgG~l~~~~~~~~ 156 (260)
T 2avn_A 131 KDKAFSEIRRVLVPDGLLIATVDNFY 156 (260)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEEEBHH
T ss_pred HHHHHHHHHHHcCCCeEEEEEeCChH
Confidence 99999999999999999999988743
No 67
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.59 E-value=8.6e-16 Score=140.47 Aligned_cols=103 Identities=12% Similarity=0.154 Sum_probs=77.9
Q ss_pred CCceeeccCcCCcccc-CCCCCCCeEEEEeCCHHHHHhcCCC--------------CcEEEeccCCC---CCC--CCCCC
Q 022305 138 YSEVFPPSNTPGVSHF-PPGYKQDRIVGMGMNEEELKRNPVL--------------TEYVVQDLNLN---PKL--PFEDN 197 (299)
Q Consensus 138 ~~~vLDiGcG~G~~~~-~~~~~~~~v~gvD~S~~ml~~a~~~--------------~~~~~~D~~~~---~~l--pf~~~ 197 (299)
..+|||+|||+|.... .......+|+|+|+|+.||+.|+++ ++|.+.|+... +.+ +++++
T Consensus 49 ~~~VLDlGCG~G~~l~~~~~~~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~~~ 128 (302)
T 2vdw_A 49 KRKVLAIDFGNGADLEKYFYGEIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFYFG 128 (302)
T ss_dssp CCEEEETTCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCCSS
T ss_pred CCeEEEEecCCcHhHHHHHhcCCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhccccCC
Confidence 3689999999995222 1222357999999999999988753 24667776211 011 35678
Q ss_pred CeeEEEeccccccc---CCHHHHHHHHHhhccCCcEEEEEecCcch
Q 022305 198 SFDVITNVVSVDYL---TKPIEVFKEMCQVLKPGGLAIVSFSNRCF 240 (299)
Q Consensus 198 ~FD~Vis~~~l~~~---~d~~~~l~ei~rvLkpGG~lii~~~~~~~ 240 (299)
+||+|+|..++||+ .+...+|++++|+|||||.+++++++...
T Consensus 129 ~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~~~~~ 174 (302)
T 2vdw_A 129 KFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTMDGDK 174 (302)
T ss_dssp CEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEECHHH
T ss_pred CeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeCCHHH
Confidence 99999999999986 46689999999999999999999887543
No 68
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.59 E-value=1.1e-15 Score=137.44 Aligned_cols=94 Identities=9% Similarity=0.124 Sum_probs=77.4
Q ss_pred CCceeeccCcCCccccCCC-CCCCeEEEEeCCHHHHHhcCC---------CCcEEEeccCCCCCCCCCCCCeeEEEeccc
Q 022305 138 YSEVFPPSNTPGVSHFPPG-YKQDRIVGMGMNEEELKRNPV---------LTEYVVQDLNLNPKLPFEDNSFDVITNVVS 207 (299)
Q Consensus 138 ~~~vLDiGcG~G~~~~~~~-~~~~~v~gvD~S~~ml~~a~~---------~~~~~~~D~~~~~~lpf~~~~FD~Vis~~~ 207 (299)
..+|||+|||+|....... ..+.+|+|+|+|+.|++.+++ +++++.+|+ ..+| ++||+|++..+
T Consensus 65 ~~~vLDiGcG~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~---~~~~---~~fD~v~~~~~ 138 (287)
T 1kpg_A 65 GMTLLDVGCGWGATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGW---EQFD---EPVDRIVSIGA 138 (287)
T ss_dssp TCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCG---GGCC---CCCSEEEEESC
T ss_pred cCEEEEECCcccHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECCh---hhCC---CCeeEEEEeCc
Confidence 4689999999996332211 125699999999999987654 477888998 6665 78999999999
Q ss_pred cccc--CCHHHHHHHHHhhccCCcEEEEEecC
Q 022305 208 VDYL--TKPIEVFKEMCQVLKPGGLAIVSFSN 237 (299)
Q Consensus 208 l~~~--~d~~~~l~ei~rvLkpGG~lii~~~~ 237 (299)
++|+ +++..+|+++.|+|||||.+++..++
T Consensus 139 l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 170 (287)
T 1kpg_A 139 FEHFGHERYDAFFSLAHRLLPADGVMLLHTIT 170 (287)
T ss_dssp GGGTCTTTHHHHHHHHHHHSCTTCEEEEEEEE
T ss_pred hhhcChHHHHHHHHHHHHhcCCCCEEEEEEec
Confidence 9999 68999999999999999999987655
No 69
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.59 E-value=8.1e-16 Score=139.72 Aligned_cols=95 Identities=12% Similarity=0.148 Sum_probs=77.2
Q ss_pred cCCceeeccCcCCccccCCCCC-CCeEEEEeCCHHHHHhcCC---------CCcEEEeccCCCCCCCCCCCCeeEEEecc
Q 022305 137 YYSEVFPPSNTPGVSHFPPGYK-QDRIVGMGMNEEELKRNPV---------LTEYVVQDLNLNPKLPFEDNSFDVITNVV 206 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~~~~~~~~-~~~v~gvD~S~~ml~~a~~---------~~~~~~~D~~~~~~lpf~~~~FD~Vis~~ 206 (299)
...+|||+|||+|......... +.+|+|+|+|+.|++.+++ +++++.+|+ ..+ +++||+|++..
T Consensus 72 ~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~---~~~---~~~fD~v~~~~ 145 (302)
T 3hem_A 72 PGMTLLDIGCGWGSTMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGW---EEF---DEPVDRIVSLG 145 (302)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCG---GGC---CCCCSEEEEES
T ss_pred CcCEEEEeeccCcHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCH---HHc---CCCccEEEEcc
Confidence 3468999999999633322211 4899999999999987764 367899998 555 78999999999
Q ss_pred cccccCCH---------HHHHHHHHhhccCCcEEEEEecC
Q 022305 207 SVDYLTKP---------IEVFKEMCQVLKPGGLAIVSFSN 237 (299)
Q Consensus 207 ~l~~~~d~---------~~~l~ei~rvLkpGG~lii~~~~ 237 (299)
+++|++|+ ..+++++.++|||||.+++....
T Consensus 146 ~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 185 (302)
T 3hem_A 146 AFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTIT 185 (302)
T ss_dssp CGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEE
T ss_pred hHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEe
Confidence 99999776 79999999999999999887544
No 70
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.59 E-value=7.2e-16 Score=137.49 Aligned_cols=95 Identities=14% Similarity=0.053 Sum_probs=78.1
Q ss_pred cCCceeeccCcCCccccCCCCCCCeEEEEeCCHHHHHhcC-------------------------CCCcEEEeccCCCCC
Q 022305 137 YYSEVFPPSNTPGVSHFPPGYKQDRIVGMGMNEEELKRNP-------------------------VLTEYVVQDLNLNPK 191 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~~~~~~~~~~~v~gvD~S~~ml~~a~-------------------------~~~~~~~~D~~~~~~ 191 (299)
...+|||+|||+|.........+.+|+|||+|+.|++.|+ .+++++++|+ ..
T Consensus 68 ~~~~vLD~GCG~G~~~~~La~~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~---~~ 144 (252)
T 2gb4_A 68 SGLRVFFPLCGKAIEMKWFADRGHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSI---FD 144 (252)
T ss_dssp CSCEEEETTCTTCTHHHHHHHTTCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCT---TT
T ss_pred CCCeEEEeCCCCcHHHHHHHHCCCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECcc---cc
Confidence 4578999999999744443334789999999999998663 2367899999 88
Q ss_pred CCCCC-CCeeEEEecccccccC--CHHHHHHHHHhhccCCcEEEEE
Q 022305 192 LPFED-NSFDVITNVVSVDYLT--KPIEVFKEMCQVLKPGGLAIVS 234 (299)
Q Consensus 192 lpf~~-~~FD~Vis~~~l~~~~--d~~~~l~ei~rvLkpGG~lii~ 234 (299)
+++++ ++||+|++..+++|++ +...+++++.|+|||||.+++.
T Consensus 145 l~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~ 190 (252)
T 2gb4_A 145 LPRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVA 190 (252)
T ss_dssp GGGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEE
T ss_pred CCcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 88865 8999999999999996 4567999999999999988643
No 71
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.58 E-value=4.7e-16 Score=139.99 Aligned_cols=108 Identities=20% Similarity=0.200 Sum_probs=85.6
Q ss_pred HHHhhhcCCceeeccCcCCccccCC-CCCCCeEEEEeCCHHHHHhcCCC---------CcEEEeccCCCCCCCC-CCCCe
Q 022305 131 IAALTKYYSEVFPPSNTPGVSHFPP-GYKQDRIVGMGMNEEELKRNPVL---------TEYVVQDLNLNPKLPF-EDNSF 199 (299)
Q Consensus 131 ~~~l~~~~~~vLDiGcG~G~~~~~~-~~~~~~v~gvD~S~~ml~~a~~~---------~~~~~~D~~~~~~lpf-~~~~F 199 (299)
+..+.....+|||+|||+|...... .....+++|+|+|+.|++.++++ ++++++|+ ..+++ ++++|
T Consensus 58 ~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~---~~~~~~~~~~f 134 (298)
T 1ri5_A 58 IRLYTKRGDSVLDLGCGKGGDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDS---YGRHMDLGKEF 134 (298)
T ss_dssp HHHHCCTTCEEEEETCTTTTTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCT---TTSCCCCSSCE
T ss_pred HHHhCCCCCeEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCc---cccccCCCCCc
Confidence 3333445679999999999633222 22345999999999999877642 68899999 77887 68899
Q ss_pred eEEEecccccc----cCCHHHHHHHHHhhccCCcEEEEEecCcchH
Q 022305 200 DVITNVVSVDY----LTKPIEVFKEMCQVLKPGGLAIVSFSNRCFW 241 (299)
Q Consensus 200 D~Vis~~~l~~----~~d~~~~l~ei~rvLkpGG~lii~~~~~~~~ 241 (299)
|+|++..++|| ..++..+|+++.++|||||.+++.+++...+
T Consensus 135 D~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~ 180 (298)
T 1ri5_A 135 DVISSQFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMTVPSRDVI 180 (298)
T ss_dssp EEEEEESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEECHHHH
T ss_pred CEEEECchhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEECCHHHH
Confidence 99999999987 4578899999999999999999999886443
No 72
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.57 E-value=4.3e-16 Score=137.31 Aligned_cols=97 Identities=24% Similarity=0.452 Sum_probs=77.3
Q ss_pred cCCceeeccCcCCccccCCCCCCCeEEEEeCCHHHHHhcCC-------CCcEEEeccCCCCCCCCCCCCeeEEEecc-cc
Q 022305 137 YYSEVFPPSNTPGVSHFPPGYKQDRIVGMGMNEEELKRNPV-------LTEYVVQDLNLNPKLPFEDNSFDVITNVV-SV 208 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~~~~~~~~~~~v~gvD~S~~ml~~a~~-------~~~~~~~D~~~~~~lpf~~~~FD~Vis~~-~l 208 (299)
...+|||+|||+|.........+.+++|+|+|+.|++.+++ +++++++|+ ..++++ ++||+|++.. ++
T Consensus 41 ~~~~vLDlGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~---~~~~~~-~~fD~v~~~~~~~ 116 (252)
T 1wzn_A 41 EVRRVLDLACGTGIPTLELAERGYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDV---LEIAFK-NEFDAVTMFFSTI 116 (252)
T ss_dssp CCCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCG---GGCCCC-SCEEEEEECSSGG
T ss_pred CCCEEEEeCCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHhcCCceEEEECCh---hhcccC-CCccEEEEcCCch
Confidence 34689999999997433333346799999999999987764 378999999 677765 6799999874 45
Q ss_pred cccC--CHHHHHHHHHhhccCCcEEEEEecC
Q 022305 209 DYLT--KPIEVFKEMCQVLKPGGLAIVSFSN 237 (299)
Q Consensus 209 ~~~~--d~~~~l~ei~rvLkpGG~lii~~~~ 237 (299)
+|++ ++..+++++.++|||||.+++++++
T Consensus 117 ~~~~~~~~~~~l~~~~~~L~pgG~li~~~~~ 147 (252)
T 1wzn_A 117 MYFDEEDLRKLFSKVAEALKPGGVFITDFPC 147 (252)
T ss_dssp GGSCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred hcCCHHHHHHHHHHHHHHcCCCeEEEEeccc
Confidence 5553 5688999999999999999998876
No 73
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.56 E-value=2.9e-15 Score=136.91 Aligned_cols=96 Identities=11% Similarity=0.137 Sum_probs=78.0
Q ss_pred cCCceeeccCcCCccccCCCCC-CCeEEEEeCCHHHHHhcCC---------CCcEEEeccCCCCCCCCCCCCeeEEEecc
Q 022305 137 YYSEVFPPSNTPGVSHFPPGYK-QDRIVGMGMNEEELKRNPV---------LTEYVVQDLNLNPKLPFEDNSFDVITNVV 206 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~~~~~~~~-~~~v~gvD~S~~ml~~a~~---------~~~~~~~D~~~~~~lpf~~~~FD~Vis~~ 206 (299)
...+|||+|||+|......... +.+|+|+|+|+.|++.+++ +++++.+|+ ..++ ++||+|++..
T Consensus 90 ~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~---~~~~---~~fD~v~~~~ 163 (318)
T 2fk8_A 90 PGMTLLDIGCGWGTTMRRAVERFDVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGW---EDFA---EPVDRIVSIE 163 (318)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCG---GGCC---CCCSEEEEES
T ss_pred CcCEEEEEcccchHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCh---HHCC---CCcCEEEEeC
Confidence 3468999999999633222211 5799999999999987754 277888998 6664 7899999999
Q ss_pred ccccc--CCHHHHHHHHHhhccCCcEEEEEecCc
Q 022305 207 SVDYL--TKPIEVFKEMCQVLKPGGLAIVSFSNR 238 (299)
Q Consensus 207 ~l~~~--~d~~~~l~ei~rvLkpGG~lii~~~~~ 238 (299)
+++|+ +++..+++++.++|||||.+++..++.
T Consensus 164 ~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 197 (318)
T 2fk8_A 164 AFEHFGHENYDDFFKRCFNIMPADGRMTVQSSVS 197 (318)
T ss_dssp CGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEEEC
T ss_pred hHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEecc
Confidence 99999 688999999999999999999886653
No 74
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.56 E-value=4.6e-15 Score=130.02 Aligned_cols=96 Identities=14% Similarity=0.036 Sum_probs=73.8
Q ss_pred hhcCCceeeccCcCCccccCC-CCCCCeEEEEeCCHHHHHhcCC-------CCcEEEeccCCCCCC--CCCCCCeeEEEe
Q 022305 135 TKYYSEVFPPSNTPGVSHFPP-GYKQDRIVGMGMNEEELKRNPV-------LTEYVVQDLNLNPKL--PFEDNSFDVITN 204 (299)
Q Consensus 135 ~~~~~~vLDiGcG~G~~~~~~-~~~~~~v~gvD~S~~ml~~a~~-------~~~~~~~D~~~~~~l--pf~~~~FD~Vis 204 (299)
.....+|||+|||+|...... .....+|+|+|+|+.|++.|++ +++++++|+ +++ ++++++||+|++
T Consensus 58 ~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~---~~~~~~~~~~~fD~V~~ 134 (236)
T 1zx0_A 58 SSKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLW---EDVAPTLPDGHFDGILY 134 (236)
T ss_dssp TTTCEEEEEECCTTSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCH---HHHGGGSCTTCEEEEEE
T ss_pred CCCCCeEEEEeccCCHHHHHHHhcCCCeEEEEcCCHHHHHHHHHHHHhcCCCeEEEecCH---HHhhcccCCCceEEEEE
Confidence 344568999999999633322 2233589999999999987765 267888998 777 899999999999
Q ss_pred -ccccccc-----CCHHHHHHHHHhhccCCcEEEEE
Q 022305 205 -VVSVDYL-----TKPIEVFKEMCQVLKPGGLAIVS 234 (299)
Q Consensus 205 -~~~l~~~-----~d~~~~l~ei~rvLkpGG~lii~ 234 (299)
.+++ +. .+...++++++|+|||||.+++.
T Consensus 135 d~~~~-~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~ 169 (236)
T 1zx0_A 135 DTYPL-SEETWHTHQFNFIKNHAFRLLKPGGVLTYC 169 (236)
T ss_dssp CCCCC-BGGGTTTHHHHHHHHTHHHHEEEEEEEEEC
T ss_pred CCccc-chhhhhhhhHHHHHHHHHHhcCCCeEEEEE
Confidence 5554 32 24457899999999999998874
No 75
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.55 E-value=2.1e-15 Score=135.76 Aligned_cols=103 Identities=14% Similarity=0.146 Sum_probs=81.2
Q ss_pred HHHHHhhh-cCCceeeccCcCCccccCCCCCCCeEEEEeCCHHHHHhcCC-------CCcEEEeccCCCCCCCCCCCCee
Q 022305 129 PAIAALTK-YYSEVFPPSNTPGVSHFPPGYKQDRIVGMGMNEEELKRNPV-------LTEYVVQDLNLNPKLPFEDNSFD 200 (299)
Q Consensus 129 ~~~~~l~~-~~~~vLDiGcG~G~~~~~~~~~~~~v~gvD~S~~ml~~a~~-------~~~~~~~D~~~~~~lpf~~~~FD 200 (299)
.+++.+.. ...+|||+|||+|.........+.+|+|+|+|+.|++.+++ +++++++|+ ..+++ +++||
T Consensus 111 ~~~~~~~~~~~~~vLD~GcG~G~~~~~l~~~g~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~---~~~~~-~~~fD 186 (286)
T 3m70_A 111 DVVDAAKIISPCKVLDLGCGQGRNSLYLSLLGYDVTSWDHNENSIAFLNETKEKENLNISTALYDI---NAANI-QENYD 186 (286)
T ss_dssp HHHHHHHHSCSCEEEEESCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCG---GGCCC-CSCEE
T ss_pred HHHHHhhccCCCcEEEECCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHHcCCceEEEEecc---ccccc-cCCcc
Confidence 34444422 45789999999997443333336799999999999987765 478899999 67776 78899
Q ss_pred EEEecccccccCC--HHHHHHHHHhhccCCcEEEEEe
Q 022305 201 VITNVVSVDYLTK--PIEVFKEMCQVLKPGGLAIVSF 235 (299)
Q Consensus 201 ~Vis~~~l~~~~d--~~~~l~ei~rvLkpGG~lii~~ 235 (299)
+|+++.+++|+++ ...+++++.++|||||.+++..
T Consensus 187 ~i~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 223 (286)
T 3m70_A 187 FIVSTVVFMFLNRERVPSIIKNMKEHTNVGGYNLIVA 223 (286)
T ss_dssp EEEECSSGGGSCGGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred EEEEccchhhCCHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 9999999999954 5699999999999999876653
No 76
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.55 E-value=8.5e-15 Score=131.66 Aligned_cols=157 Identities=15% Similarity=0.187 Sum_probs=100.3
Q ss_pred cCCceeeccCcCCcc---c-c-CCCCCCCeEEEEeCCHHHHHhcCC--------CCcEEEeccCCCCCCC------CCCC
Q 022305 137 YYSEVFPPSNTPGVS---H-F-PPGYKQDRIVGMGMNEEELKRNPV--------LTEYVVQDLNLNPKLP------FEDN 197 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~---~-~-~~~~~~~~v~gvD~S~~ml~~a~~--------~~~~~~~D~~~~~~lp------f~~~ 197 (299)
-..++||+|||.++. + + ....++++|+++|.|+.||+.|++ +++|+++|+ .+++ ...+
T Consensus 78 g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~~~~~~~v~aD~---~~~~~~l~~~~~~~ 154 (277)
T 3giw_A 78 GIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTPEGRTAYVEADM---LDPASILDAPELRD 154 (277)
T ss_dssp CCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCSSSEEEEEECCT---TCHHHHHTCHHHHT
T ss_pred CCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCCCCcEEEEEecc---cChhhhhccccccc
Confidence 346899999997552 1 1 123468999999999999998865 268999999 5542 1134
Q ss_pred Cee-----EEEecccccccCC---HHHHHHHHHhhccCCcEEEEEecCcch----HHHHHHhhhhcCCCchhhhHHHHHH
Q 022305 198 SFD-----VITNVVSVDYLTK---PIEVFKEMCQVLKPGGLAIVSFSNRCF----WTKAISIWTSTGDADHVMIVGAYFH 265 (299)
Q Consensus 198 ~FD-----~Vis~~~l~~~~d---~~~~l~ei~rvLkpGG~lii~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (299)
.|| .|+++.+|||++| +..+++++.+.|+|||+|+++...... .......|...+..-.++-..+.-.
T Consensus 155 ~~D~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~~~~d~~p~~~~~~~~~~~~~g~p~~~rs~~ei~~ 234 (277)
T 3giw_A 155 TLDLTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSIGTAEFAPQEVGRVAREYAARNMPMRLRTHAEAEE 234 (277)
T ss_dssp TCCTTSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEEECCTTSHHHHHHHHHHHHHTTCCCCCCCHHHHHH
T ss_pred ccCcCCcchHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEEEEeccCCCCHHHHHHHHHHHHhcCCCCccCCHHHHHH
Confidence 565 6889999999987 578999999999999999998654322 2333344443333222222222222
Q ss_pred HhCCCCCCe--eeecC---CCCC---C----CCCeEEEEEEec
Q 022305 266 YAGGYEPPQ--AVDIS---PNPG---R----SDPMYVVYSRKA 296 (299)
Q Consensus 266 ~~aGF~~v~--~~~~~---~~~~---~----~~p~~~v~arK~ 296 (299)
.-.||+.++ ++.++ |... . .-..|.-+|||+
T Consensus 235 ~f~GlelvePG~v~~~~Wrp~~~~~~~~~~~~~~~~~gv~rk~ 277 (277)
T 3giw_A 235 FFEGLELVEPGIVQVHKWHPDAATADGIRDEDIAMYGAVARKP 277 (277)
T ss_dssp TTTTSEECTTCSEEGGGSSCCTTTTTTCCGGGCCEEEEEEECC
T ss_pred HhCCCcccCCcEeecccccCCCCCCCCCCcccceeEEEEEecC
Confidence 225888654 22221 1111 0 112699999996
No 77
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.55 E-value=1.5e-15 Score=127.04 Aligned_cols=82 Identities=16% Similarity=0.198 Sum_probs=70.4
Q ss_pred CCceeeccCcCCccccCCCCCCCeEEEEeCCHHHHHhcCC----CCcEEEeccCCCCCCCC---CCCCeeEEEecccccc
Q 022305 138 YSEVFPPSNTPGVSHFPPGYKQDRIVGMGMNEEELKRNPV----LTEYVVQDLNLNPKLPF---EDNSFDVITNVVSVDY 210 (299)
Q Consensus 138 ~~~vLDiGcG~G~~~~~~~~~~~~v~gvD~S~~ml~~a~~----~~~~~~~D~~~~~~lpf---~~~~FD~Vis~~~l~~ 210 (299)
..+|||+|||. +++|+|+.|++.+++ +++++++|+ +++++ ++++||+|+|+.++||
T Consensus 13 g~~vL~~~~g~--------------v~vD~s~~ml~~a~~~~~~~~~~~~~d~---~~~~~~~~~~~~fD~V~~~~~l~~ 75 (176)
T 2ld4_A 13 GQFVAVVWDKS--------------SPVEALKGLVDKLQALTGNEGRVSVENI---KQLLQSAHKESSFDIILSGLVPGS 75 (176)
T ss_dssp TSEEEEEECTT--------------SCHHHHHHHHHHHHHHTTTTSEEEEEEG---GGGGGGCCCSSCEEEEEECCSTTC
T ss_pred CCEEEEecCCc--------------eeeeCCHHHHHHHHHhcccCcEEEEech---hcCccccCCCCCEeEEEECChhhh
Confidence 35677777763 239999999997765 378999999 78877 8899999999999999
Q ss_pred c-CCHHHHHHHHHhhccCCcEEEEEec
Q 022305 211 L-TKPIEVFKEMCQVLKPGGLAIVSFS 236 (299)
Q Consensus 211 ~-~d~~~~l~ei~rvLkpGG~lii~~~ 236 (299)
+ +++.++|++++|+|||||.+++..+
T Consensus 76 ~~~~~~~~l~~~~r~LkpgG~l~~~~~ 102 (176)
T 2ld4_A 76 TTLHSAEILAEIARILRPGGCLFLKEP 102 (176)
T ss_dssp CCCCCHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cccCHHHHHHHHHHHCCCCEEEEEEcc
Confidence 9 9999999999999999999999644
No 78
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.55 E-value=3.3e-15 Score=127.80 Aligned_cols=101 Identities=19% Similarity=0.194 Sum_probs=81.5
Q ss_pred hcCCceeeccCcCCccccCCCCCC-CeEEEEeCCHHHHHhcCC------CCcEEEeccCCCCCCCCCCCCeeEEEecccc
Q 022305 136 KYYSEVFPPSNTPGVSHFPPGYKQ-DRIVGMGMNEEELKRNPV------LTEYVVQDLNLNPKLPFEDNSFDVITNVVSV 208 (299)
Q Consensus 136 ~~~~~vLDiGcG~G~~~~~~~~~~-~~v~gvD~S~~ml~~a~~------~~~~~~~D~~~~~~lpf~~~~FD~Vis~~~l 208 (299)
....+|||+|||+|.........+ .+++|+|+|+.|++.+++ +++++++|+ ..+++++++||+|++..++
T Consensus 41 ~~~~~vLdiGcG~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~i~~~~~d~---~~~~~~~~~fD~v~~~~~~ 117 (215)
T 2pxx_A 41 RPEDRILVLGCGNSALSYELFLGGFPNVTSVDYSSVVVAAMQACYAHVPQLRWETMDV---RKLDFPSASFDVVLEKGTL 117 (215)
T ss_dssp CTTCCEEEETCTTCSHHHHHHHTTCCCEEEEESCHHHHHHHHHHTTTCTTCEEEECCT---TSCCSCSSCEEEEEEESHH
T ss_pred CCCCeEEEECCCCcHHHHHHHHcCCCcEEEEeCCHHHHHHHHHhcccCCCcEEEEcch---hcCCCCCCcccEEEECcch
Confidence 345789999999997333222122 389999999999987654 478999999 7888888999999999888
Q ss_pred cccC---------------CHHHHHHHHHhhccCCcEEEEEecCcc
Q 022305 209 DYLT---------------KPIEVFKEMCQVLKPGGLAIVSFSNRC 239 (299)
Q Consensus 209 ~~~~---------------d~~~~l~ei~rvLkpGG~lii~~~~~~ 239 (299)
+++. ++..+++++.++|||||.+++..++..
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~ 163 (215)
T 2pxx_A 118 DALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSAAP 163 (215)
T ss_dssp HHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCH
T ss_pred hhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCCCc
Confidence 7764 668999999999999999998877643
No 79
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.53 E-value=5.7e-15 Score=130.05 Aligned_cols=146 Identities=14% Similarity=0.124 Sum_probs=98.6
Q ss_pred hcCCceeeccCcCCccc--cCCC-CCCCeEEEEeCCHHHHHhcCC------CCcEEEeccCCCCCCCCCCCCeeEEEecc
Q 022305 136 KYYSEVFPPSNTPGVSH--FPPG-YKQDRIVGMGMNEEELKRNPV------LTEYVVQDLNLNPKLPFEDNSFDVITNVV 206 (299)
Q Consensus 136 ~~~~~vLDiGcG~G~~~--~~~~-~~~~~v~gvD~S~~ml~~a~~------~~~~~~~D~~~~~~lpf~~~~FD~Vis~~ 206 (299)
+...+|||+|||+|... ++.. -+.++|+|+|+|+.|++.+++ ++..+.+|....+..++..+++|+|++.
T Consensus 76 kpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~~p~~~~~~~~~vDvVf~d- 154 (233)
T 4df3_A 76 KEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGDARFPEKYRHLVEGVDGLYAD- 154 (233)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCTTEEEEESCTTCGGGGTTTCCCEEEEEEC-
T ss_pred CCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhcCeeEEEEeccCccccccccceEEEEEEe-
Confidence 45578999999999733 3322 256899999999999975432 4677888874434556778899999875
Q ss_pred cccccCCHHHHHHHHHhhccCCcEEEEEecCcchHHHHHHhhhhcCCCchhhhHHHHHHHhCCCCCCeeeecCCCCCCCC
Q 022305 207 SVDYLTKPIEVFKEMCQVLKPGGLAIVSFSNRCFWTKAISIWTSTGDADHVMIVGAYFHYAGGYEPPQAVDISPNPGRSD 286 (299)
Q Consensus 207 ~l~~~~d~~~~l~ei~rvLkpGG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aGF~~v~~~~~~~~~~~~~ 286 (299)
+.|..++..++.+++|+|||||.+++.+..+.. .+.... ...+.-..+.+ +++||+.++..++.|-+ .
T Consensus 155 -~~~~~~~~~~l~~~~r~LKpGG~lvI~ik~r~~------d~~~p~-~~~~~~ev~~L-~~~GF~l~e~i~L~pf~---~ 222 (233)
T 4df3_A 155 -VAQPEQAAIVVRNARFFLRDGGYMLMAIKARSI------DVTTEP-SEVYKREIKTL-MDGGLEIKDVVHLDPFD---R 222 (233)
T ss_dssp -CCCTTHHHHHHHHHHHHEEEEEEEEEEEECCHH------HHHTCC-CHHHHHHHHHH-HHTTCCEEEEEECTTTS---T
T ss_pred -ccCChhHHHHHHHHHHhccCCCEEEEEEecccC------CCCCCh-HHHHHHHHHHH-HHCCCEEEEEEccCCCC---C
Confidence 456678889999999999999999887644321 111111 11111111122 56999999988876533 2
Q ss_pred CeEEEEEE
Q 022305 287 PMYVVYSR 294 (299)
Q Consensus 287 p~~~v~ar 294 (299)
..+.|+++
T Consensus 223 ~H~lv~~~ 230 (233)
T 4df3_A 223 DHAMIYAV 230 (233)
T ss_dssp TEEEEEEC
T ss_pred ceEEEEEE
Confidence 45666665
No 80
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.53 E-value=1.4e-14 Score=133.18 Aligned_cols=149 Identities=13% Similarity=0.081 Sum_probs=100.9
Q ss_pred hcCCceeeccCcCCc--cccCCCCCCCeEEEEeCCHHHHHhcCC---------CCcEEEeccCCCCCCCCCCCCeeEEEe
Q 022305 136 KYYSEVFPPSNTPGV--SHFPPGYKQDRIVGMGMNEEELKRNPV---------LTEYVVQDLNLNPKLPFEDNSFDVITN 204 (299)
Q Consensus 136 ~~~~~vLDiGcG~G~--~~~~~~~~~~~v~gvD~S~~ml~~a~~---------~~~~~~~D~~~~~~lpf~~~~FD~Vis 204 (299)
....+|||+|||+|. ..+....++.+++++|+| .|++.+++ +++++.+|+ .+.+++++ ||+|++
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~---~~~~~~~~-~D~v~~ 238 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENARIQGVASRYHTIAGSA---FEVDYGND-YDLVLL 238 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHHHHTCGGGEEEEESCT---TTSCCCSC-EEEEEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHHhcCCCcceEEEeccc---ccCCCCCC-CcEEEE
Confidence 345789999999996 233334467899999999 99987664 378999999 66677655 999999
Q ss_pred cccccccCCH--HHHHHHHHhhccCCcEEEEEecCcc------hHHHHHHhhhh----cCCCchhhhHHHHHHHhCCCCC
Q 022305 205 VVSVDYLTKP--IEVFKEMCQVLKPGGLAIVSFSNRC------FWTKAISIWTS----TGDADHVMIVGAYFHYAGGYEP 272 (299)
Q Consensus 205 ~~~l~~~~d~--~~~l~ei~rvLkpGG~lii~~~~~~------~~~~~~~~~~~----~~~~~~~~~~~~~~~~~aGF~~ 272 (299)
.+++||+++. .++++++.++|||||.+++...... .....+..+.. ........-+.+.+ +++||+.
T Consensus 239 ~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~ll-~~aGf~~ 317 (335)
T 2r3s_A 239 PNFLHHFDVATCEQLLRKIKTALAVEGKVIVFDFIPNSDRITPPDAAAFSLVMLATTPNGDAYTFAEYESMF-SNAGFSH 317 (335)
T ss_dssp ESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCCCTTSSCSHHHHHHHHHHHHHSSSCCCCCHHHHHHHH-HHTTCSE
T ss_pred cchhccCCHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCcCCchHHHHHHHHHHeeCCCCCcCCHHHHHHHH-HHCCCCe
Confidence 9999999654 7999999999999997776543311 11222222111 11112222333444 5699999
Q ss_pred CeeeecCCCCCCCCCeEEEEEEec
Q 022305 273 PQAVDISPNPGRSDPMYVVYSRKA 296 (299)
Q Consensus 273 v~~~~~~~~~~~~~p~~~v~arK~ 296 (299)
+++..+. .++.+++++++
T Consensus 318 ~~~~~~~------~~~~~i~~~~~ 335 (335)
T 2r3s_A 318 SQLHSLP------TTQQQVIVAYK 335 (335)
T ss_dssp EEEECCT------TSSSEEEEEEC
T ss_pred eeEEECC------CCceeEEEecC
Confidence 9886653 24456667654
No 81
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.53 E-value=7.2e-15 Score=134.22 Aligned_cols=101 Identities=18% Similarity=0.238 Sum_probs=80.3
Q ss_pred cCCceeeccCcCCccccCC-CCCCCeEEEEeCCHHHHHhcCC---------------CCcEEEeccCCCCCCC----CC-
Q 022305 137 YYSEVFPPSNTPGVSHFPP-GYKQDRIVGMGMNEEELKRNPV---------------LTEYVVQDLNLNPKLP----FE- 195 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~~~~~-~~~~~~v~gvD~S~~ml~~a~~---------------~~~~~~~D~~~~~~lp----f~- 195 (299)
...+|||+|||+|...... ..+..+++|+|+|+.|++.+++ +++++++|+ +.++ ++
T Consensus 34 ~~~~VLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~---~~~~~~~~~~~ 110 (313)
T 3bgv_A 34 RDITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADS---SKELLIDKFRD 110 (313)
T ss_dssp -CCEEEEETCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCT---TTSCSTTTCSS
T ss_pred CCCEEEEECCCCcHHHHHHHhcCCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecc---cccchhhhccc
Confidence 4578999999999633211 1346799999999999987654 367899999 6665 53
Q ss_pred -CCCeeEEEeccccccc-C---CHHHHHHHHHhhccCCcEEEEEecCcch
Q 022305 196 -DNSFDVITNVVSVDYL-T---KPIEVFKEMCQVLKPGGLAIVSFSNRCF 240 (299)
Q Consensus 196 -~~~FD~Vis~~~l~~~-~---d~~~~l~ei~rvLkpGG~lii~~~~~~~ 240 (299)
+++||+|+|..++||+ + ++..+|+++.++|||||.+++++++...
T Consensus 111 ~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~ 160 (313)
T 3bgv_A 111 PQMCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTPNSFE 160 (313)
T ss_dssp TTCCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEECHHH
T ss_pred CCCCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEecCChHH
Confidence 4599999999999998 4 4579999999999999999999887543
No 82
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.53 E-value=4e-15 Score=128.49 Aligned_cols=146 Identities=12% Similarity=0.188 Sum_probs=95.2
Q ss_pred HHHHHHh-hhcCCceeeccCcCCc--cccCCCCCCCeEEEEeCCHHHHHh----cCC--------CCcEEEeccCCCCCC
Q 022305 128 DPAIAAL-TKYYSEVFPPSNTPGV--SHFPPGYKQDRIVGMGMNEEELKR----NPV--------LTEYVVQDLNLNPKL 192 (299)
Q Consensus 128 ~~~~~~l-~~~~~~vLDiGcG~G~--~~~~~~~~~~~v~gvD~S~~ml~~----a~~--------~~~~~~~D~~~~~~l 192 (299)
...++.+ .+...+|||+|||+|. ..+....++.+|+|+|+|+.|++. +++ +++++++|+ +++
T Consensus 17 ~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~---~~l 93 (218)
T 3mq2_A 17 DAEFEQLRSQYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATA---ERL 93 (218)
T ss_dssp HHHHHHHHTTSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCS---TTC
T ss_pred HHHHHHhhccCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecch---hhC
Confidence 3344444 3345689999999996 333444557899999999998875 222 478999999 889
Q ss_pred CCCCCCeeEEEec---ccc--cccCCHHHHHHHHHhhccCCcEEEEEecCcchHHHHHHhhhhcCCCchhhhHHHHHH--
Q 022305 193 PFEDNSFDVITNV---VSV--DYLTKPIEVFKEMCQVLKPGGLAIVSFSNRCFWTKAISIWTSTGDADHVMIVGAYFH-- 265 (299)
Q Consensus 193 pf~~~~FD~Vis~---~~l--~~~~d~~~~l~ei~rvLkpGG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 265 (299)
|+++++ |.|+.. ..+ +|++++..+++++.|+|||||.+++++....+..... .......... ....+.+.
T Consensus 94 ~~~~~~-d~v~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~l~~~ 170 (218)
T 3mq2_A 94 PPLSGV-GELHVLMPWGSLLRGVLGSSPEMLRGMAAVCRPGASFLVALNLHAWRPSVP-EVGEHPEPTP-DSADEWLAPR 170 (218)
T ss_dssp CSCCCE-EEEEEESCCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEEEEEGGGBTTBCG-GGTTCCCCCH-HHHHHHHHHH
T ss_pred CCCCCC-CEEEEEccchhhhhhhhccHHHHHHHHHHHcCCCcEEEEEecccccccccc-ccccCCccch-HHHHHHHHHH
Confidence 988776 776633 333 3788999999999999999999999765432221111 1111111111 12222122
Q ss_pred -HhCCCCCCeeeecC
Q 022305 266 -YAGGYEPPQAVDIS 279 (299)
Q Consensus 266 -~~aGF~~v~~~~~~ 279 (299)
..+||+..++..+.
T Consensus 171 l~~aGf~i~~~~~~~ 185 (218)
T 3mq2_A 171 YAEAGWKLADCRYLE 185 (218)
T ss_dssp HHHTTEEEEEEEEEC
T ss_pred HHHcCCCceeeeccc
Confidence 56999988776653
No 83
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.52 E-value=4.4e-14 Score=130.09 Aligned_cols=143 Identities=12% Similarity=0.050 Sum_probs=99.4
Q ss_pred CCceeeccCcCCc--cccCCCCCCCeEEEEeCCHHHHHhcCC---------CCcEEEeccCCCCCCCCCCCCeeEEEecc
Q 022305 138 YSEVFPPSNTPGV--SHFPPGYKQDRIVGMGMNEEELKRNPV---------LTEYVVQDLNLNPKLPFEDNSFDVITNVV 206 (299)
Q Consensus 138 ~~~vLDiGcG~G~--~~~~~~~~~~~v~gvD~S~~ml~~a~~---------~~~~~~~D~~~~~~lpf~~~~FD~Vis~~ 206 (299)
..+|||+|||+|. ..+...+++.+++++|+ +.|++.+++ +++++.+|+ . .+++. +||+|++.+
T Consensus 170 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~---~-~~~p~-~~D~v~~~~ 243 (332)
T 3i53_A 170 LGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSF---F-DPLPA-GAGGYVLSA 243 (332)
T ss_dssp GSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCT---T-SCCCC-SCSEEEEES
T ss_pred CCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCC---C-CCCCC-CCcEEEEeh
Confidence 4689999999996 33444557789999999 999987763 488999998 4 34544 799999999
Q ss_pred cccccCCH--HHHHHHHHhhccCCcEEEEEecCcch-----HHHHHHhhhhcCC-CchhhhHHHHHHHhCCCCCCeeeec
Q 022305 207 SVDYLTKP--IEVFKEMCQVLKPGGLAIVSFSNRCF-----WTKAISIWTSTGD-ADHVMIVGAYFHYAGGYEPPQAVDI 278 (299)
Q Consensus 207 ~l~~~~d~--~~~l~ei~rvLkpGG~lii~~~~~~~-----~~~~~~~~~~~~~-~~~~~~~~~~~~~~aGF~~v~~~~~ 278 (299)
++||++|+ .++|++++++|||||+++|....... +... ..+...+. .....-+.+.+ +++||+.+++..+
T Consensus 244 vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~d~-~~~~~~~~~~~t~~e~~~ll-~~aGf~~~~~~~~ 321 (332)
T 3i53_A 244 VLHDWDDLSAVAILRRCAEAAGSGGVVLVIEAVAGDEHAGTGMDL-RMLTYFGGKERSLAELGELA-AQAGLAVRAAHPI 321 (332)
T ss_dssp CGGGSCHHHHHHHHHHHHHHHTTTCEEEEEECCCC---CCHHHHH-HHHHHHSCCCCCHHHHHHHH-HHTTEEEEEEEEC
T ss_pred hhccCCHHHHHHHHHHHHHhcCCCCEEEEEeecCCCCCccHHHHH-HHHhhCCCCCCCHHHHHHHH-HHCCCEEEEEEEC
Confidence 99999986 88999999999999988876432111 1111 11111121 12222333444 5699999988765
Q ss_pred CCCCCCCCCeEEEEEEe
Q 022305 279 SPNPGRSDPMYVVYSRK 295 (299)
Q Consensus 279 ~~~~~~~~p~~~v~arK 295 (299)
. . +.++.+||
T Consensus 322 ~------~-~~vie~r~ 331 (332)
T 3i53_A 322 S------Y-VSIVEMTA 331 (332)
T ss_dssp S------S-SEEEEEEE
T ss_pred C------C-cEEEEEee
Confidence 3 1 66777765
No 84
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.52 E-value=2.3e-14 Score=125.23 Aligned_cols=137 Identities=16% Similarity=0.189 Sum_probs=93.9
Q ss_pred CCceeeccCcCCccc--cCCCCCCCeEEEEeCCHHHHHhcCC------CCcEEEeccCCCCC----CCCCCCCeeEEEec
Q 022305 138 YSEVFPPSNTPGVSH--FPPGYKQDRIVGMGMNEEELKRNPV------LTEYVVQDLNLNPK----LPFEDNSFDVITNV 205 (299)
Q Consensus 138 ~~~vLDiGcG~G~~~--~~~~~~~~~v~gvD~S~~ml~~a~~------~~~~~~~D~~~~~~----lpf~~~~FD~Vis~ 205 (299)
..+|||+|||+|... +....+..+|+|+|+|+.|++.+++ ++.++.+|+ .. +++. ++||+|+
T Consensus 75 ~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~---~~~~~~~~~~-~~~D~v~-- 148 (230)
T 1fbn_A 75 DSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDA---NKPQEYANIV-EKVDVIY-- 148 (230)
T ss_dssp TCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCT---TCGGGGTTTS-CCEEEEE--
T ss_pred CCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcCCCeEEEECCC---CCcccccccC-ccEEEEE--
Confidence 468999999999733 2323235799999999999975432 477889998 66 6666 7899999
Q ss_pred ccccccCCH---HHHHHHHHhhccCCcEEEEEecCcchHHHHHHhhhhcCCCchhhhHHH---HHHHhCCCCCCeeeecC
Q 022305 206 VSVDYLTKP---IEVFKEMCQVLKPGGLAIVSFSNRCFWTKAISIWTSTGDADHVMIVGA---YFHYAGGYEPPQAVDIS 279 (299)
Q Consensus 206 ~~l~~~~d~---~~~l~ei~rvLkpGG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~aGF~~v~~~~~~ 279 (299)
++++++ ..+++++.++|||||.+++.+...+. ......+ .+..+ .+ ..+||+.+++.++.
T Consensus 149 ---~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~---------~~~~~~~-~~~~~~l~~l-~~~Gf~~~~~~~~~ 214 (230)
T 1fbn_A 149 ---EDVAQPNQAEILIKNAKWFLKKGGYGMIAIKARSI---------DVTKDPK-EIFKEQKEIL-EAGGFKIVDEVDIE 214 (230)
T ss_dssp ---ECCCSTTHHHHHHHHHHHHEEEEEEEEEEEEGGGT---------CSSSCHH-HHHHHHHHHH-HHHTEEEEEEEECT
T ss_pred ---EecCChhHHHHHHHHHHHhCCCCcEEEEEEecCCC---------CCCCCHH-HhhHHHHHHH-HHCCCEEEEEEccC
Confidence 456666 78899999999999999886432110 0000001 11212 22 45799988887765
Q ss_pred CCCCCCCCeEEEEEEecC
Q 022305 280 PNPGRSDPMYVVYSRKAS 297 (299)
Q Consensus 280 ~~~~~~~p~~~v~arK~~ 297 (299)
+. ....++++++|..
T Consensus 215 ~~---~~~~~~v~~~k~~ 229 (230)
T 1fbn_A 215 PF---EKDHVMFVGIWEG 229 (230)
T ss_dssp TT---STTEEEEEEEECC
T ss_pred CC---ccceEEEEEEeCC
Confidence 43 2467899999864
No 85
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.51 E-value=1.9e-14 Score=126.66 Aligned_cols=138 Identities=10% Similarity=0.075 Sum_probs=97.1
Q ss_pred cCCceeeccCcCCccccCCC--CCCCeEEEEeCCHHHHHhcCC--------CCcEEEeccCCCCCCCCC---CCCeeEEE
Q 022305 137 YYSEVFPPSNTPGVSHFPPG--YKQDRIVGMGMNEEELKRNPV--------LTEYVVQDLNLNPKLPFE---DNSFDVIT 203 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~~~~~~--~~~~~v~gvD~S~~ml~~a~~--------~~~~~~~D~~~~~~lpf~---~~~FD~Vi 203 (299)
...+|||+|||+|...+... .++.+|+|+|+|+.|++.+++ +++++++|+ +++++. +++||+|+
T Consensus 70 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~---~~~~~~~~~~~~fD~V~ 146 (240)
T 1xdz_A 70 QVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRA---ETFGQRKDVRESYDIVT 146 (240)
T ss_dssp GCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCH---HHHTTCTTTTTCEEEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccH---HHhcccccccCCccEEE
Confidence 34689999999997444333 567899999999999987654 378899998 667654 67899999
Q ss_pred ecccccccCCHHHHHHHHHhhccCCcEEEEEecCcchHHHHHHhhhhcCCCchhhhHHHHHHHhCCCCCCeeeecCCCCC
Q 022305 204 NVVSVDYLTKPIEVFKEMCQVLKPGGLAIVSFSNRCFWTKAISIWTSTGDADHVMIVGAYFHYAGGYEPPQAVDISPNPG 283 (299)
Q Consensus 204 s~~~l~~~~d~~~~l~ei~rvLkpGG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aGF~~v~~~~~~~~~~ 283 (299)
|.. +.++..+++++.++|||||.+++...... .. ......+.+ +..||...++..+.. +.
T Consensus 147 ~~~----~~~~~~~l~~~~~~LkpgG~l~~~~g~~~--~~------------~~~~~~~~l-~~~g~~~~~~~~~~~-~~ 206 (240)
T 1xdz_A 147 ARA----VARLSVLSELCLPLVKKNGLFVALKAASA--EE------------ELNAGKKAI-TTLGGELENIHSFKL-PI 206 (240)
T ss_dssp EEC----CSCHHHHHHHHGGGEEEEEEEEEEECC-C--HH------------HHHHHHHHH-HHTTEEEEEEEEEEC-TT
T ss_pred Eec----cCCHHHHHHHHHHhcCCCCEEEEEeCCCc--hH------------HHHHHHHHH-HHcCCeEeEEEEEec-CC
Confidence 976 47899999999999999999988633211 00 011122233 458898877765542 22
Q ss_pred CCCCeEEEEEEecC
Q 022305 284 RSDPMYVVYSRKAS 297 (299)
Q Consensus 284 ~~~p~~~v~arK~~ 297 (299)
.....++++++|.+
T Consensus 207 ~~~~~~l~~~~k~~ 220 (240)
T 1xdz_A 207 EESDRNIMVIRKIK 220 (240)
T ss_dssp TCCEEEEEEEEECS
T ss_pred CCCceEEEEEEecC
Confidence 33456777777754
No 86
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.51 E-value=1.6e-14 Score=130.30 Aligned_cols=119 Identities=16% Similarity=0.276 Sum_probs=84.3
Q ss_pred cccccCcchhhccccHHHHHHhhhcCCceeeccCcCCcc----c--cCCCCC----CCeEEEEeCCHHHHHhcCCC----
Q 022305 113 DSLFYETPRFVTHIDDPAIAALTKYYSEVFPPSNTPGVS----H--FPPGYK----QDRIVGMGMNEEELKRNPVL---- 178 (299)
Q Consensus 113 ~~~~y~~~~~~~~l~~~~~~~l~~~~~~vLDiGcG~G~~----~--~~~~~~----~~~v~gvD~S~~ml~~a~~~---- 178 (299)
.+.|+..|.....+.+.++.+ +...+|||+|||+|.- . +....+ +.+|+|+|+|+.||+.|++.
T Consensus 83 ~t~FfRd~~~f~~l~~~llp~--~~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~ 160 (274)
T 1af7_A 83 LTAFFREAHHFPILAEHARRR--HGEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRL 160 (274)
T ss_dssp CCCTTTTTTHHHHHHHHHHHS--CSCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEG
T ss_pred CccccCChHHHHHHHHHccCC--CCCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCch
Confidence 344666554444443333322 1235899999999961 1 111111 35999999999999977542
Q ss_pred -----------------------------------CcEEEeccCCCCCCCCC-CCCeeEEEecccccccCCH--HHHHHH
Q 022305 179 -----------------------------------TEYVVQDLNLNPKLPFE-DNSFDVITNVVSVDYLTKP--IEVFKE 220 (299)
Q Consensus 179 -----------------------------------~~~~~~D~~~~~~lpf~-~~~FD~Vis~~~l~~~~d~--~~~l~e 220 (299)
+.|.++|+ ...|++ ++.||+|+|.++++|+++. .+++++
T Consensus 161 ~~~~~~~~~~~~~~f~~~~~~~~~~~~v~~~lr~~V~F~~~dl---~~~~~~~~~~fDlI~crnvliyf~~~~~~~vl~~ 237 (274)
T 1af7_A 161 SELKTLSPQQLQRYFMRGTGPHEGLVRVRQELANYVEFSSVNL---LEKQYNVPGPFDAIFCRNVMIYFDKTTQEDILRR 237 (274)
T ss_dssp GGGTTSCHHHHHHHEEECCTTSCSEEEECHHHHTTEEEEECCT---TCSSCCCCCCEEEEEECSSGGGSCHHHHHHHHHH
T ss_pred hhhhcCCHHHHHHHhhccccCCCCceeechhhcccCeEEeccc---CCCCCCcCCCeeEEEECCchHhCCHHHHHHHHHH
Confidence 56777888 565665 5789999999999999766 789999
Q ss_pred HHhhccCCcEEEEEec
Q 022305 221 MCQVLKPGGLAIVSFS 236 (299)
Q Consensus 221 i~rvLkpGG~lii~~~ 236 (299)
++++|||||+++++..
T Consensus 238 ~~~~L~pgG~L~lg~s 253 (274)
T 1af7_A 238 FVPLLKPDGLLFAGHS 253 (274)
T ss_dssp HGGGEEEEEEEEECTT
T ss_pred HHHHhCCCcEEEEEec
Confidence 9999999999998643
No 87
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.51 E-value=1.3e-14 Score=121.95 Aligned_cols=98 Identities=12% Similarity=0.119 Sum_probs=71.4
Q ss_pred hcCCceeeccCcCCccccCCCCCCCeEEEEeCCHHHHHhcCC--------CCcEEEeccCCCCCCC-CCCCCeeEEEecc
Q 022305 136 KYYSEVFPPSNTPGVSHFPPGYKQDRIVGMGMNEEELKRNPV--------LTEYVVQDLNLNPKLP-FEDNSFDVITNVV 206 (299)
Q Consensus 136 ~~~~~vLDiGcG~G~~~~~~~~~~~~v~gvD~S~~ml~~a~~--------~~~~~~~D~~~~~~lp-f~~~~FD~Vis~~ 206 (299)
+...+|||+|||+|.........+.+|+|+|+|+.|++.|++ ++++++.|. +.++ +.+++||+|+++.
T Consensus 21 ~~~~~vLDiGcG~G~~~~~la~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~---~~l~~~~~~~fD~v~~~~ 97 (185)
T 3mti_A 21 DDESIVVDATMGNGNDTAFLAGLSKKVYAFDVQEQALGKTSQRLSDLGIENTELILDGH---ENLDHYVREPIRAAIFNL 97 (185)
T ss_dssp CTTCEEEESCCTTSHHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCG---GGGGGTCCSCEEEEEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHhCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcH---HHHHhhccCCcCEEEEeC
Confidence 345789999999997443333337899999999999997764 367788776 5543 4578899999873
Q ss_pred -cccc--------cCCHHHHHHHHHhhccCCcEEEEEec
Q 022305 207 -SVDY--------LTKPIEVFKEMCQVLKPGGLAIVSFS 236 (299)
Q Consensus 207 -~l~~--------~~d~~~~l~ei~rvLkpGG~lii~~~ 236 (299)
.+++ ..+...+++++.|+|||||.+++.+.
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 136 (185)
T 3mti_A 98 GYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIY 136 (185)
T ss_dssp C-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEe
Confidence 2322 13456789999999999999888643
No 88
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.51 E-value=6.1e-15 Score=128.51 Aligned_cols=95 Identities=16% Similarity=0.155 Sum_probs=76.8
Q ss_pred HHHHhhhcCCceeeccCcCCccccCCCCCCCeEEEEeCCHHHHHhcCC---CCcEEEeccCCCCCCCCC-CCCeeEEEec
Q 022305 130 AIAALTKYYSEVFPPSNTPGVSHFPPGYKQDRIVGMGMNEEELKRNPV---LTEYVVQDLNLNPKLPFE-DNSFDVITNV 205 (299)
Q Consensus 130 ~~~~l~~~~~~vLDiGcG~G~~~~~~~~~~~~v~gvD~S~~ml~~a~~---~~~~~~~D~~~~~~lpf~-~~~FD~Vis~ 205 (299)
++..+.....+|||+|||+|.........+.+|+|+|+|+.|++.+++ +++++++|+. +.+|++ +++||+|+++
T Consensus 41 ~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~--~~~~~~~~~~fD~v~~~ 118 (226)
T 3m33_A 41 WLSRLLTPQTRVLEAGCGHGPDAARFGPQAARWAAYDFSPELLKLARANAPHADVYEWNGK--GELPAGLGAPFGLIVSR 118 (226)
T ss_dssp HHHHHCCTTCEEEEESCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHHCTTSEEEECCSC--SSCCTTCCCCEEEEEEE
T ss_pred HHHhcCCCCCeEEEeCCCCCHHHHHHHHcCCEEEEEECCHHHHHHHHHhCCCceEEEcchh--hccCCcCCCCEEEEEeC
Confidence 344444556799999999997433333336899999999999998865 4899999984 467888 8999999997
Q ss_pred ccccccCCHHHHHHHHHhhccCCcEEE
Q 022305 206 VSVDYLTKPIEVFKEMCQVLKPGGLAI 232 (299)
Q Consensus 206 ~~l~~~~d~~~~l~ei~rvLkpGG~li 232 (299)
.++..+++++.++|||||.++
T Consensus 119 ------~~~~~~l~~~~~~LkpgG~l~ 139 (226)
T 3m33_A 119 ------RGPTSVILRLPELAAPDAHFL 139 (226)
T ss_dssp ------SCCSGGGGGHHHHEEEEEEEE
T ss_pred ------CCHHHHHHHHHHHcCCCcEEE
Confidence 578899999999999999988
No 89
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.51 E-value=2.7e-14 Score=122.13 Aligned_cols=138 Identities=12% Similarity=0.027 Sum_probs=97.2
Q ss_pred cCCceeeccCcCCcccc--CCCCCCCeEEEEeCCHHHHHhcCC--------CCcEEEeccCCCCCCCCCCCCeeEEEecc
Q 022305 137 YYSEVFPPSNTPGVSHF--PPGYKQDRIVGMGMNEEELKRNPV--------LTEYVVQDLNLNPKLPFEDNSFDVITNVV 206 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~~~--~~~~~~~~v~gvD~S~~ml~~a~~--------~~~~~~~D~~~~~~lpf~~~~FD~Vis~~ 206 (299)
...+|||+|||+|.... ....+..+++|+|+|+.|++.+++ +++++.+|+ .......++||+|++..
T Consensus 40 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~---~~~~~~~~~~D~i~~~~ 116 (204)
T 3e05_A 40 DDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFA---PEGLDDLPDPDRVFIGG 116 (204)
T ss_dssp TTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCT---TTTCTTSCCCSEEEESC
T ss_pred CCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCCh---hhhhhcCCCCCEEEECC
Confidence 45689999999996322 333356899999999999998764 377888888 44433447799999998
Q ss_pred cccccCCHHHHHHHHHhhccCCcEEEEEecCcchHHHHHHhhhhcCCCchhhhHHHHHHHhCCCCCCeeeecCCC---C-
Q 022305 207 SVDYLTKPIEVFKEMCQVLKPGGLAIVSFSNRCFWTKAISIWTSTGDADHVMIVGAYFHYAGGYEPPQAVDISPN---P- 282 (299)
Q Consensus 207 ~l~~~~d~~~~l~ei~rvLkpGG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aGF~~v~~~~~~~~---~- 282 (299)
+++ ++..+++++.++|||||.+++........ ..+.+.+ ...|| .+++..+... +
T Consensus 117 ~~~---~~~~~l~~~~~~LkpgG~l~~~~~~~~~~----------------~~~~~~l-~~~g~-~~~~~~~~~~~~~~~ 175 (204)
T 3e05_A 117 SGG---MLEEIIDAVDRRLKSEGVIVLNAVTLDTL----------------TKAVEFL-EDHGY-MVEVACVNVAKTKGL 175 (204)
T ss_dssp CTT---CHHHHHHHHHHHCCTTCEEEEEECBHHHH----------------HHHHHHH-HHTTC-EEEEEEEEEEEEC--
T ss_pred CCc---CHHHHHHHHHHhcCCCeEEEEEecccccH----------------HHHHHHH-HHCCC-ceeEEEEEeecceEc
Confidence 775 88999999999999999999976543211 1222333 45788 5655554221 1
Q ss_pred ------CCCCCeEEEEEEecCC
Q 022305 283 ------GRSDPMYVVYSRKAST 298 (299)
Q Consensus 283 ------~~~~p~~~v~arK~~~ 298 (299)
....|.+++.++|...
T Consensus 176 ~~~~~~~~~~Pv~i~~~~~~~~ 197 (204)
T 3e05_A 176 TEYKMFESHNPVYIITAWKSDE 197 (204)
T ss_dssp -CCCBCEECCCEEEEEEECC--
T ss_pred cceEEeccCCCeEEEEEEcCCC
Confidence 1257999999999754
No 90
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.51 E-value=9e-15 Score=128.42 Aligned_cols=98 Identities=10% Similarity=-0.064 Sum_probs=77.0
Q ss_pred cCCceeeccCcCCccccCCCCCCCeEEEEeCCHHHHHhcCC-----CCcEEEeccCCCCCCCCCC-----CCeeEEEecc
Q 022305 137 YYSEVFPPSNTPGVSHFPPGYKQDRIVGMGMNEEELKRNPV-----LTEYVVQDLNLNPKLPFED-----NSFDVITNVV 206 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~~~~~~~~~~~v~gvD~S~~ml~~a~~-----~~~~~~~D~~~~~~lpf~~-----~~FD~Vis~~ 206 (299)
...+|||+|||+|.........+.+|+|+|+|+.|++.+++ +++++++|+ ..+++.. ..||+|++..
T Consensus 56 ~~~~vLD~GcG~G~~~~~la~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~d~---~~~~~~~~~~~~~~~d~v~~~~ 132 (245)
T 3ggd_A 56 PELPLIDFACGNGTQTKFLSQFFPRVIGLDVSKSALEIAAKENTAANISYRLLDG---LVPEQAAQIHSEIGDANIYMRT 132 (245)
T ss_dssp TTSCEEEETCTTSHHHHHHHHHSSCEEEEESCHHHHHHHHHHSCCTTEEEEECCT---TCHHHHHHHHHHHCSCEEEEES
T ss_pred CCCeEEEEcCCCCHHHHHHHHhCCCEEEEECCHHHHHHHHHhCcccCceEEECcc---cccccccccccccCccEEEEcc
Confidence 34689999999996333222233489999999999997754 478999999 6655432 3499999999
Q ss_pred cccccC--CHHHHHHHHHhhccCCcEEEEEecC
Q 022305 207 SVDYLT--KPIEVFKEMCQVLKPGGLAIVSFSN 237 (299)
Q Consensus 207 ~l~~~~--d~~~~l~ei~rvLkpGG~lii~~~~ 237 (299)
+++|++ ++..+++++.++|||||.+++....
T Consensus 133 ~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 165 (245)
T 3ggd_A 133 GFHHIPVEKRELLGQSLRILLGKQGAMYLIELG 165 (245)
T ss_dssp SSTTSCGGGHHHHHHHHHHHHTTTCEEEEEEEC
T ss_pred hhhcCCHHHHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 999998 8899999999999999986665433
No 91
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.50 E-value=4.8e-14 Score=131.27 Aligned_cols=146 Identities=8% Similarity=-0.002 Sum_probs=102.7
Q ss_pred cCCceeeccCcCCc--cccCCCCCCCeEEEEeCCHHHHHhcCC---------CCcEEEeccCCCCCCCCCCCCeeEEEec
Q 022305 137 YYSEVFPPSNTPGV--SHFPPGYKQDRIVGMGMNEEELKRNPV---------LTEYVVQDLNLNPKLPFEDNSFDVITNV 205 (299)
Q Consensus 137 ~~~~vLDiGcG~G~--~~~~~~~~~~~v~gvD~S~~ml~~a~~---------~~~~~~~D~~~~~~lpf~~~~FD~Vis~ 205 (299)
...+|||+|||+|. ..+....++.+++++|+ +.|++.+++ +++++.+|+ .+.++++. |+|++.
T Consensus 190 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~---~~~~~~~~--D~v~~~ 263 (359)
T 1x19_A 190 GVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDI---YKESYPEA--DAVLFC 263 (359)
T ss_dssp TCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCT---TTSCCCCC--SEEEEE
T ss_pred CCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCcc---ccCCCCCC--CEEEEe
Confidence 45689999999996 33334456789999999 999987653 378999999 66676654 999999
Q ss_pred ccccccCC--HHHHHHHHHhhccCCcEEEEEe-cCc----chHHHHHHhhhhc--CCC----chhhhHHHHHHHhCCCCC
Q 022305 206 VSVDYLTK--PIEVFKEMCQVLKPGGLAIVSF-SNR----CFWTKAISIWTST--GDA----DHVMIVGAYFHYAGGYEP 272 (299)
Q Consensus 206 ~~l~~~~d--~~~~l~ei~rvLkpGG~lii~~-~~~----~~~~~~~~~~~~~--~~~----~~~~~~~~~~~~~aGF~~ 272 (299)
.++||+++ ..++|++++++|||||.++|.. ..+ ..+......+... +.. ....-+.+.+ +++||+.
T Consensus 264 ~vlh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~t~~e~~~ll-~~aGf~~ 342 (359)
T 1x19_A 264 RILYSANEQLSTIMCKKAFDAMRSGGRLLILDMVIDDPENPNFDYLSHYILGAGMPFSVLGFKEQARYKEIL-ESLGYKD 342 (359)
T ss_dssp SCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEECCCCTTSCCHHHHHHHGGGGGSSCCCCCCCCGGGHHHHH-HHHTCEE
T ss_pred chhccCCHHHHHHHHHHHHHhcCCCCEEEEEecccCCCCCchHHHHHHHHHhcCCCCcccCCCCHHHHHHHH-HHCCCce
Confidence 99999987 7899999999999999886653 211 1122222221111 111 2233444555 4589999
Q ss_pred CeeeecCCCCCCCCCeEEEEEEec
Q 022305 273 PQAVDISPNPGRSDPMYVVYSRKA 296 (299)
Q Consensus 273 v~~~~~~~~~~~~~p~~~v~arK~ 296 (299)
+++..+. +..+++++|+
T Consensus 343 v~~~~~~-------~~~vi~a~kp 359 (359)
T 1x19_A 343 VTMVRKY-------DHLLVQAVKP 359 (359)
T ss_dssp EEEEEET-------TEEEEEEECC
T ss_pred EEEEecC-------CceEEEEeCC
Confidence 8887654 5788899985
No 92
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.50 E-value=3.1e-14 Score=132.00 Aligned_cols=149 Identities=13% Similarity=0.132 Sum_probs=103.0
Q ss_pred CCceeeccCcCCc--cccCCCCCCCeEEEEeCCHHHHHhcCC---------CCcEEEeccCCCCCCC-CCCCCeeEEEec
Q 022305 138 YSEVFPPSNTPGV--SHFPPGYKQDRIVGMGMNEEELKRNPV---------LTEYVVQDLNLNPKLP-FEDNSFDVITNV 205 (299)
Q Consensus 138 ~~~vLDiGcG~G~--~~~~~~~~~~~v~gvD~S~~ml~~a~~---------~~~~~~~D~~~~~~lp-f~~~~FD~Vis~ 205 (299)
..+|||+|||+|. ..+...+++.+++++|+ +.+++.+++ +++++.+|+ .+.+ +.++.||+|++.
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~---~~~~~~~~~~~D~v~~~ 255 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIHAHDLGGRVEFFEKNL---LDARNFEGGAADVVMLN 255 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCGGGEEEEECCT---TCGGGGTTCCEEEEEEE
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHHhcCCCCceEEEeCCc---ccCcccCCCCccEEEEe
Confidence 5799999999996 33444556789999999 888876653 378999998 5554 245669999999
Q ss_pred ccccccCCH--HHHHHHHHhhccCCcEEEEEecC---c---chHHHHHHhhh--h--cCCCchhhhHHHHHHHhCCCCCC
Q 022305 206 VSVDYLTKP--IEVFKEMCQVLKPGGLAIVSFSN---R---CFWTKAISIWT--S--TGDADHVMIVGAYFHYAGGYEPP 273 (299)
Q Consensus 206 ~~l~~~~d~--~~~l~ei~rvLkpGG~lii~~~~---~---~~~~~~~~~~~--~--~~~~~~~~~~~~~~~~~aGF~~v 273 (299)
+++||+++. .++|++++++|||||.+++.... . ......+..+. . .+......-+.+.+ +++||+.+
T Consensus 256 ~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll-~~aGf~~~ 334 (352)
T 3mcz_A 256 DCLHYFDAREAREVIGHAAGLVKPGGALLILTMTMNDDRVTPALSADFSLHMMVNTNHGELHPTPWIAGVV-RDAGLAVG 334 (352)
T ss_dssp SCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEECCCTTSSSSHHHHHHHHHHHHHSTTCCCCCHHHHHHHH-HHTTCEEE
T ss_pred cccccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCCchHHHhhHHHHhhCCCCCcCCHHHHHHHH-HHCCCcee
Confidence 999999876 89999999999999988775321 1 11122222111 1 11122222333444 56999988
Q ss_pred eeeecCCCCCCCCCeEEEEEEecCCC
Q 022305 274 QAVDISPNPGRSDPMYVVYSRKASTA 299 (299)
Q Consensus 274 ~~~~~~~~~~~~~p~~~v~arK~~~~ 299 (299)
+.. ..++.+++++|++++
T Consensus 335 ~~~--------~g~~~l~~a~kp~~e 352 (352)
T 3mcz_A 335 ERS--------IGRYTLLIGQRSSGE 352 (352)
T ss_dssp EEE--------ETTEEEEEEECCCC-
T ss_pred eec--------cCceEEEEEecCCCC
Confidence 742 246899999999763
No 93
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.50 E-value=9.3e-14 Score=116.05 Aligned_cols=133 Identities=17% Similarity=0.093 Sum_probs=97.7
Q ss_pred cCCceeeccCcCCccccCCCCCCCeEEEEeCCHHHHHhcCCCCcEEEeccCCCCCCCCCCCCeeEEEecccccccCCH--
Q 022305 137 YYSEVFPPSNTPGVSHFPPGYKQDRIVGMGMNEEELKRNPVLTEYVVQDLNLNPKLPFEDNSFDVITNVVSVDYLTKP-- 214 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~~~~~~~~~~~v~gvD~S~~ml~~a~~~~~~~~~D~~~~~~lpf~~~~FD~Vis~~~l~~~~d~-- 214 (299)
...+|||+|||+|.........+ +|+|+|+|+.|++. ..+++++++|+ .+ ++++++||+|+++..+++.++.
T Consensus 23 ~~~~vLD~GcG~G~~~~~l~~~~-~v~gvD~s~~~~~~-~~~~~~~~~d~---~~-~~~~~~fD~i~~n~~~~~~~~~~~ 96 (170)
T 3q87_B 23 EMKIVLDLGTSTGVITEQLRKRN-TVVSTDLNIRALES-HRGGNLVRADL---LC-SINQESVDVVVFNPPYVPDTDDPI 96 (170)
T ss_dssp CSCEEEEETCTTCHHHHHHTTTS-EEEEEESCHHHHHT-CSSSCEEECST---TT-TBCGGGCSEEEECCCCBTTCCCTT
T ss_pred CCCeEEEeccCccHHHHHHHhcC-cEEEEECCHHHHhc-ccCCeEEECCh---hh-hcccCCCCEEEECCCCccCCcccc
Confidence 34689999999997444433344 99999999999999 55699999999 55 6667899999999888876554
Q ss_pred -------HHHHHHHHhhccCCcEEEEEecCcchHHHHHHhhhhcCCCchhhhHHHHHHHhCCCCCCeeeecCCCCCCCCC
Q 022305 215 -------IEVFKEMCQVLKPGGLAIVSFSNRCFWTKAISIWTSTGDADHVMIVGAYFHYAGGYEPPQAVDISPNPGRSDP 287 (299)
Q Consensus 215 -------~~~l~ei~rvLkpGG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aGF~~v~~~~~~~~~~~~~p 287 (299)
..+++++.+.| |||.+++..+.... ...+.+++ +.+||+.+++..... ..+.
T Consensus 97 ~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~~~~----------------~~~l~~~l-~~~gf~~~~~~~~~~---~~e~ 155 (170)
T 3q87_B 97 IGGGYLGREVIDRFVDAV-TVGMLYLLVIEANR----------------PKEVLARL-EERGYGTRILKVRKI---LGET 155 (170)
T ss_dssp TBCCGGGCHHHHHHHHHC-CSSEEEEEEEGGGC----------------HHHHHHHH-HHTTCEEEEEEEEEC---SSSE
T ss_pred ccCCcchHHHHHHHHhhC-CCCEEEEEEecCCC----------------HHHHHHHH-HHCCCcEEEEEeecc---CCce
Confidence 68899999999 99999887643221 11223334 458899877766542 3456
Q ss_pred eEEEEEEec
Q 022305 288 MYVVYSRKA 296 (299)
Q Consensus 288 ~~~v~arK~ 296 (299)
.|.+..+|.
T Consensus 156 ~~~~~~~~~ 164 (170)
T 3q87_B 156 VYIIKGEKS 164 (170)
T ss_dssp EEEEEEECC
T ss_pred EEEEEEecc
Confidence 677666664
No 94
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.50 E-value=2.7e-14 Score=133.30 Aligned_cols=153 Identities=12% Similarity=0.050 Sum_probs=101.3
Q ss_pred cCCceeeccCcCCc--cccCCCCCCCeEEEEeCCHHHHHhcCC---------CCcEEEeccCCCCCCCCCCCCeeEEEec
Q 022305 137 YYSEVFPPSNTPGV--SHFPPGYKQDRIVGMGMNEEELKRNPV---------LTEYVVQDLNLNPKLPFEDNSFDVITNV 205 (299)
Q Consensus 137 ~~~~vLDiGcG~G~--~~~~~~~~~~~v~gvD~S~~ml~~a~~---------~~~~~~~D~~~~~~lpf~~~~FD~Vis~ 205 (299)
...+|||+|||+|. ..+....++.+++++|+ +.|++.+++ +++++.+|+ .+ +++.+ ||+|++.
T Consensus 182 ~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~---~~-~~~~~-~D~v~~~ 255 (374)
T 1qzz_A 182 AVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDF---FK-PLPVT-ADVVLLS 255 (374)
T ss_dssp TCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCT---TS-CCSCC-EEEEEEE
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCC---CC-cCCCC-CCEEEEe
Confidence 35789999999996 33333446789999999 999987654 478999998 43 34333 9999999
Q ss_pred ccccccCCHH--HHHHHHHhhccCCcEEEEEec--C-c----chHHHHHHhhh---hcCCCchhhhHHHHHHHhCCCCCC
Q 022305 206 VSVDYLTKPI--EVFKEMCQVLKPGGLAIVSFS--N-R----CFWTKAISIWT---STGDADHVMIVGAYFHYAGGYEPP 273 (299)
Q Consensus 206 ~~l~~~~d~~--~~l~ei~rvLkpGG~lii~~~--~-~----~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~aGF~~v 273 (299)
+++||+++.. ++++++.++|||||.++|... . + ..+......+. ..+......-+.+.+ .++||+.+
T Consensus 256 ~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll-~~aGf~~~ 334 (374)
T 1qzz_A 256 FVLLNWSDEDALTILRGCVRALEPGGRLLVLDRADVEGDGADRFFSTLLDLRMLTFMGGRVRTRDEVVDLA-GSAGLALA 334 (374)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCH-------HHHHHHHHHHHHHHHSCCCCCHHHHHHHH-HTTTEEEE
T ss_pred ccccCCCHHHHHHHHHHHHHhcCCCcEEEEEechhhcCCCCCcchhhhcchHHHHhCCCcCCCHHHHHHHH-HHCCCceE
Confidence 9999998875 899999999999998877544 1 1 11111122111 111111222333344 56999999
Q ss_pred eeeecCCCCCCCCCeEEEEEEecC
Q 022305 274 QAVDISPNPGRSDPMYVVYSRKAS 297 (299)
Q Consensus 274 ~~~~~~~~~~~~~p~~~v~arK~~ 297 (299)
++..+... ....+..++.++|++
T Consensus 335 ~~~~~~~~-~~~~~~~~i~~~~~~ 357 (374)
T 1qzz_A 335 SERTSGST-TLPFDFSILEFTAVS 357 (374)
T ss_dssp EEEEECCS-SCSSCEEEEEEEECC
T ss_pred EEEECCCC-cccCCcEEEEEEECc
Confidence 88776421 112234788888874
No 95
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.50 E-value=1.1e-14 Score=122.05 Aligned_cols=136 Identities=14% Similarity=0.135 Sum_probs=93.7
Q ss_pred cCCceeeccCcCCccccCCCCCCCeEEEEeCCHHHHHhcCC---------CCcEEEeccCCCCCCCCCC-CCeeEEEecc
Q 022305 137 YYSEVFPPSNTPGVSHFPPGYKQDRIVGMGMNEEELKRNPV---------LTEYVVQDLNLNPKLPFED-NSFDVITNVV 206 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~~~~~~~~~~~v~gvD~S~~ml~~a~~---------~~~~~~~D~~~~~~lpf~~-~~FD~Vis~~ 206 (299)
...+|||+|||+|...........+++|+|+|+.+++.+++ ++++..+|+ .. ++++ ++||+|++..
T Consensus 33 ~~~~vldiG~G~G~~~~~l~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~---~~-~~~~~~~~D~v~~~~ 108 (192)
T 1l3i_A 33 KNDVAVDVGCGTGGVTLELAGRVRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDA---PE-ALCKIPDIDIAVVGG 108 (192)
T ss_dssp TTCEEEEESCTTSHHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCH---HH-HHTTSCCEEEEEESC
T ss_pred CCCEEEEECCCCCHHHHHHHHhcCEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCH---HH-hcccCCCCCEEEECC
Confidence 44689999999997333222223899999999999987654 467788887 43 2333 5899999988
Q ss_pred cccccCCHHHHHHHHHhhccCCcEEEEEecCcchHHHHHHhhhhcCCCchhhhHHHHHHHhCCCCCCeeeecCCCC----
Q 022305 207 SVDYLTKPIEVFKEMCQVLKPGGLAIVSFSNRCFWTKAISIWTSTGDADHVMIVGAYFHYAGGYEPPQAVDISPNP---- 282 (299)
Q Consensus 207 ~l~~~~d~~~~l~ei~rvLkpGG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aGF~~v~~~~~~~~~---- 282 (299)
+++ +...+++++.++|||||.+++...+.... ....+.+ ...|| .+++..+....
T Consensus 109 ~~~---~~~~~l~~~~~~l~~gG~l~~~~~~~~~~----------------~~~~~~l-~~~g~-~~~~~~~~~~~~~~~ 167 (192)
T 1l3i_A 109 SGG---ELQEILRIIKDKLKPGGRIIVTAILLETK----------------FEAMECL-RDLGF-DVNITELNIARGRAL 167 (192)
T ss_dssp CTT---CHHHHHHHHHHTEEEEEEEEEEECBHHHH----------------HHHHHHH-HHTTC-CCEEEEEEEEEEEEE
T ss_pred chH---HHHHHHHHHHHhcCCCcEEEEEecCcchH----------------HHHHHHH-HHCCC-ceEEEEEEcccCeEe
Confidence 765 46899999999999999999876643211 1122333 44789 56665553211
Q ss_pred ------CCCCCeEEEEEEecC
Q 022305 283 ------GRSDPMYVVYSRKAS 297 (299)
Q Consensus 283 ------~~~~p~~~v~arK~~ 297 (299)
....|.|+++++|+.
T Consensus 168 ~~~~~~~~~~p~~l~~~~k~~ 188 (192)
T 1l3i_A 168 DRGTMMVSRNPVALIYTGVSH 188 (192)
T ss_dssp TTEEEEEECCCEEEEECCC--
T ss_pred cCceeecCCCCEEEEEEeccc
Confidence 125788999999974
No 96
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.50 E-value=3.8e-14 Score=142.93 Aligned_cols=100 Identities=16% Similarity=0.117 Sum_probs=84.0
Q ss_pred cCCceeeccCcCCccccCCCC---CCCeEEEEeCCHHHHHhcCC--------------CCcEEEeccCCCCCCCCCCCCe
Q 022305 137 YYSEVFPPSNTPGVSHFPPGY---KQDRIVGMGMNEEELKRNPV--------------LTEYVVQDLNLNPKLPFEDNSF 199 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~~~~~~~---~~~~v~gvD~S~~ml~~a~~--------------~~~~~~~D~~~~~~lpf~~~~F 199 (299)
...+|||+|||+|........ +..+|+|+|+|+.|++.|++ +++++++|+ ..+++++++|
T Consensus 721 ~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa---~dLp~~d~sF 797 (950)
T 3htx_A 721 SASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSI---LEFDSRLHDV 797 (950)
T ss_dssp CCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCT---TSCCTTSCSC
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECch---HhCCcccCCe
Confidence 457899999999974333222 23799999999999998754 378999999 8899999999
Q ss_pred eEEEecccccccCCHH--HHHHHHHhhccCCcEEEEEecCcch
Q 022305 200 DVITNVVSVDYLTKPI--EVFKEMCQVLKPGGLAIVSFSNRCF 240 (299)
Q Consensus 200 D~Vis~~~l~~~~d~~--~~l~ei~rvLkpGG~lii~~~~~~~ 240 (299)
|+|++..+++|++++. .+++++.|+|||| .+++++++..+
T Consensus 798 DlVV~~eVLeHL~dp~l~~~L~eI~RvLKPG-~LIISTPN~ey 839 (950)
T 3htx_A 798 DIGTCLEVIEHMEEDQACEFGEKVLSLFHPK-LLIVSTPNYEF 839 (950)
T ss_dssp CEEEEESCGGGSCHHHHHHHHHHHHHTTCCS-EEEEEECBGGG
T ss_pred eEEEEeCchhhCChHHHHHHHHHHHHHcCCC-EEEEEecCchh
Confidence 9999999999999766 5999999999999 89999888643
No 97
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.49 E-value=6e-14 Score=131.13 Aligned_cols=151 Identities=13% Similarity=0.084 Sum_probs=100.3
Q ss_pred hcCCceeeccCcCCc--cccCCCCCCCeEEEEeCCHHHHHhcCC---------CCcEEEeccCCCCCC--CCCCCCeeEE
Q 022305 136 KYYSEVFPPSNTPGV--SHFPPGYKQDRIVGMGMNEEELKRNPV---------LTEYVVQDLNLNPKL--PFEDNSFDVI 202 (299)
Q Consensus 136 ~~~~~vLDiGcG~G~--~~~~~~~~~~~v~gvD~S~~ml~~a~~---------~~~~~~~D~~~~~~l--pf~~~~FD~V 202 (299)
....+|||+|||+|. ..+...+++.+++++|+ +.|++.+++ +++++.+|+ ... |++ ++||+|
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~---~~~~~~~p-~~~D~v 252 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANL---LDRDVPFP-TGFDAV 252 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCC---CSSSCCCC-CCCSEE
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHhcCcccceEEEEccc---cccCCCCC-CCcCEE
Confidence 456799999999996 33444557889999999 999987654 378999998 554 465 789999
Q ss_pred EecccccccCCH--HHHHHHHHhhccCCcEEEEEecC--cc-hHHH-----HHHh----hhhcCC-CchhhhHHHHHHHh
Q 022305 203 TNVVSVDYLTKP--IEVFKEMCQVLKPGGLAIVSFSN--RC-FWTK-----AISI----WTSTGD-ADHVMIVGAYFHYA 267 (299)
Q Consensus 203 is~~~l~~~~d~--~~~l~ei~rvLkpGG~lii~~~~--~~-~~~~-----~~~~----~~~~~~-~~~~~~~~~~~~~~ 267 (299)
++..++|++++. .++|++++++|||||.++|.... .. .... .... ....+. .....-+.+.+ ++
T Consensus 253 ~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll-~~ 331 (363)
T 3dp7_A 253 WMSQFLDCFSEEEVISILTRVAQSIGKDSKVYIMETLWDRQRYETASYCLTQISLYFTAMANGNSKMFHSDDLIRCI-EN 331 (363)
T ss_dssp EEESCSTTSCHHHHHHHHHHHHHHCCTTCEEEEEECCTTSCSSHHHHHHHHHHHHHHHHSSCSSCCSCCHHHHHHHH-HT
T ss_pred EEechhhhCCHHHHHHHHHHHHHhcCCCcEEEEEeeccCCccccchhhHHHHhhhhHHhhhCCCCcccCHHHHHHHH-HH
Confidence 999999999866 57899999999999988775432 11 1111 0111 111111 11122333344 56
Q ss_pred CCCCCCeeeecCCCCCCCCCeEEEEEEecC
Q 022305 268 GGYEPPQAVDISPNPGRSDPMYVVYSRKAS 297 (299)
Q Consensus 268 aGF~~v~~~~~~~~~~~~~p~~~v~arK~~ 297 (299)
+||+.+++..... .+.-++.++|.+
T Consensus 332 AGf~~v~~~~~~g-----~~~svi~~~~~~ 356 (363)
T 3dp7_A 332 AGLEVEEIQDNIG-----LGHSILQCRLKE 356 (363)
T ss_dssp TTEEESCCCCCBT-----TTBEEEEEEEC-
T ss_pred cCCeEEEEEeCCC-----CCceEEEEeecc
Confidence 9999888754432 235666666654
No 98
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.49 E-value=1.1e-14 Score=129.85 Aligned_cols=99 Identities=20% Similarity=0.315 Sum_probs=79.6
Q ss_pred hcCCceeeccCcCCccc--cCCCCCCCeEEEEeCCHHHHHhcCC---CCcEEEeccCCCCCCCCCCCCeeEEEecccccc
Q 022305 136 KYYSEVFPPSNTPGVSH--FPPGYKQDRIVGMGMNEEELKRNPV---LTEYVVQDLNLNPKLPFEDNSFDVITNVVSVDY 210 (299)
Q Consensus 136 ~~~~~vLDiGcG~G~~~--~~~~~~~~~v~gvD~S~~ml~~a~~---~~~~~~~D~~~~~~lpf~~~~FD~Vis~~~l~~ 210 (299)
....+|||+|||+|... +....++.+++|+|+|+.|++.+++ ++.+..+|+ ..+++++++||+|++..+..
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~---~~~~~~~~~fD~v~~~~~~~- 159 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRYPQVTFCVASS---HRLPFSDTSMDAIIRIYAPC- 159 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHCTTSEEEECCT---TSCSBCTTCEEEEEEESCCC-
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhCCCcEEEEcch---hhCCCCCCceeEEEEeCChh-
Confidence 34578999999999632 2333357899999999999998875 378999999 88899999999999977633
Q ss_pred cCCHHHHHHHHHhhccCCcEEEEEecCcchHHHH
Q 022305 211 LTKPIEVFKEMCQVLKPGGLAIVSFSNRCFWTKA 244 (299)
Q Consensus 211 ~~d~~~~l~ei~rvLkpGG~lii~~~~~~~~~~~ 244 (299)
.++++.|+|||||.+++.+++...+.+.
T Consensus 160 ------~l~~~~~~L~pgG~l~~~~~~~~~~~~~ 187 (269)
T 1p91_A 160 ------KAEELARVVKPGGWVITATPGPRHLMEL 187 (269)
T ss_dssp ------CHHHHHHHEEEEEEEEEEEECTTTTHHH
T ss_pred ------hHHHHHHhcCCCcEEEEEEcCHHHHHHH
Confidence 4799999999999999988876554443
No 99
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.49 E-value=6.4e-14 Score=121.31 Aligned_cols=139 Identities=10% Similarity=0.039 Sum_probs=88.8
Q ss_pred cCCceeeccCcCCcc--ccCCCCCCCeEEEEeCCHHHHH----hcC--CCCcEEEeccCCCCC----CCCCCCCeeEEEe
Q 022305 137 YYSEVFPPSNTPGVS--HFPPGYKQDRIVGMGMNEEELK----RNP--VLTEYVVQDLNLNPK----LPFEDNSFDVITN 204 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~--~~~~~~~~~~v~gvD~S~~ml~----~a~--~~~~~~~~D~~~~~~----lpf~~~~FD~Vis 204 (299)
...+|||+|||+|.. .+....+..+|+|+|+|+.|++ .++ .++.++.+|+ .. .++. ++||+|++
T Consensus 57 ~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~~~v~~~~~d~---~~~~~~~~~~-~~fD~V~~ 132 (210)
T 1nt2_A 57 GDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDA---SKPWKYSGIV-EKVDLIYQ 132 (210)
T ss_dssp SSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHCSSEEEECSCT---TCGGGTTTTC-CCEEEEEE
T ss_pred CCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcCCCeEEEEcCC---CCchhhcccc-cceeEEEE
Confidence 346899999999963 2222223579999999998653 333 2467778887 44 2454 78999999
Q ss_pred cccccccCCHHHHHHHHHhhccCCcEEEEEecCcchHHHHHHhhhhcCCCchhhhHHHHH--HHhCCCCCCeeeecCCCC
Q 022305 205 VVSVDYLTKPIEVFKEMCQVLKPGGLAIVSFSNRCFWTKAISIWTSTGDADHVMIVGAYF--HYAGGYEPPQAVDISPNP 282 (299)
Q Consensus 205 ~~~l~~~~d~~~~l~ei~rvLkpGG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~aGF~~v~~~~~~~~~ 282 (299)
.. .++ .+...++++++|+|||||.+++.+...+ ..+. . .....+.... .+++ |+..+..+..|-
T Consensus 133 ~~-~~~-~~~~~~l~~~~r~LkpgG~l~i~~~~~~------~~~~--~--~~~~~~~~~~~~l~~~-f~~~~~~~~~p~- 198 (210)
T 1nt2_A 133 DI-AQK-NQIEILKANAEFFLKEKGEVVIMVKARS------IDST--A--EPEEVFKSVLKEMEGD-FKIVKHGSLMPY- 198 (210)
T ss_dssp CC-CST-THHHHHHHHHHHHEEEEEEEEEEEEHHH------HCTT--S--CHHHHHHHHHHHHHTT-SEEEEEEECTTT-
T ss_pred ec-cCh-hHHHHHHHHHHHHhCCCCEEEEEEecCC------cccc--C--CHHHHHHHHHHHHHhh-cEEeeeecCCCC-
Confidence 73 222 3344569999999999999999864321 0000 0 1111221111 1446 999888887542
Q ss_pred CCCCCeEEEEEEe
Q 022305 283 GRSDPMYVVYSRK 295 (299)
Q Consensus 283 ~~~~p~~~v~arK 295 (299)
....|.++++|
T Consensus 199 --~~~h~~~~~~~ 209 (210)
T 1nt2_A 199 --HRDHIFIHAYR 209 (210)
T ss_dssp --CTTEEEEEEEE
T ss_pred --CCCcEEEEEEc
Confidence 23678999987
No 100
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.49 E-value=6.8e-15 Score=128.18 Aligned_cols=98 Identities=16% Similarity=0.199 Sum_probs=78.6
Q ss_pred hcCCceeeccCcCCccccCCCCCCCeEEEEeCCHHHHHhcCC---CCcEEEeccCCCCCCCCCCCCeeEEEec-cccccc
Q 022305 136 KYYSEVFPPSNTPGVSHFPPGYKQDRIVGMGMNEEELKRNPV---LTEYVVQDLNLNPKLPFEDNSFDVITNV-VSVDYL 211 (299)
Q Consensus 136 ~~~~~vLDiGcG~G~~~~~~~~~~~~v~gvD~S~~ml~~a~~---~~~~~~~D~~~~~~lpf~~~~FD~Vis~-~~l~~~ 211 (299)
....+|||+|||+|.........+.+++|+|+|+.|++.+++ +++++.+|+ ..+++ +++||+|+|. .+++|+
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~d~---~~~~~-~~~~D~v~~~~~~~~~~ 114 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKEFGDTAGLELSEDMLTHARKRLPDATLHQGDM---RDFRL-GRKFSAVVSMFSSVGYL 114 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHHSEEEEEESCHHHHHHHHHHCTTCEEEECCT---TTCCC-SSCEEEEEECTTGGGGC
T ss_pred CCCCeEEEecccCCHHHHHHHHhCCcEEEEeCCHHHHHHHHHhCCCCEEEECCH---HHccc-CCCCcEEEEcCchHhhc
Confidence 345789999999996333222223489999999999998875 388999999 77777 7889999964 599999
Q ss_pred C---CHHHHHHHHHhhccCCcEEEEEecC
Q 022305 212 T---KPIEVFKEMCQVLKPGGLAIVSFSN 237 (299)
Q Consensus 212 ~---d~~~~l~ei~rvLkpGG~lii~~~~ 237 (299)
. ++..+|+++.++|||||.++++..+
T Consensus 115 ~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 143 (239)
T 3bxo_A 115 KTTEELGAAVASFAEHLEPGGVVVVEPWW 143 (239)
T ss_dssp CSHHHHHHHHHHHHHTEEEEEEEEECCCC
T ss_pred CCHHHHHHHHHHHHHhcCCCeEEEEEecc
Confidence 5 4578999999999999999998644
No 101
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.49 E-value=3.7e-14 Score=118.92 Aligned_cols=138 Identities=14% Similarity=0.115 Sum_probs=96.6
Q ss_pred HHHHhh-hcCCceeeccCcCCccccCCCCCCCeEEEEeCCHHHHHhcCCC----------CcEEEeccCCCCCCCCCCCC
Q 022305 130 AIAALT-KYYSEVFPPSNTPGVSHFPPGYKQDRIVGMGMNEEELKRNPVL----------TEYVVQDLNLNPKLPFEDNS 198 (299)
Q Consensus 130 ~~~~l~-~~~~~vLDiGcG~G~~~~~~~~~~~~v~gvD~S~~ml~~a~~~----------~~~~~~D~~~~~~lpf~~~~ 198 (299)
+++.+. +...+|||+|||+|.........+.+++|+|+|+.|++.++++ ++++.+|+ .. ++++++
T Consensus 44 l~~~~~~~~~~~vLdiG~G~G~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~---~~-~~~~~~ 119 (194)
T 1dus_A 44 LVENVVVDKDDDILDLGCGYGVIGIALADEVKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDL---YE-NVKDRK 119 (194)
T ss_dssp HHHHCCCCTTCEEEEETCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECST---TT-TCTTSC
T ss_pred HHHHcccCCCCeEEEeCCCCCHHHHHHHHcCCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECch---hc-ccccCC
Confidence 344442 2446899999999973332222278999999999999876542 67888888 44 345778
Q ss_pred eeEEEecccccc-cCCHHHHHHHHHhhccCCcEEEEEecCcchHHHHHHhhhhcCCCchhhhHHHHHHHhCCCCCCeeee
Q 022305 199 FDVITNVVSVDY-LTKPIEVFKEMCQVLKPGGLAIVSFSNRCFWTKAISIWTSTGDADHVMIVGAYFHYAGGYEPPQAVD 277 (299)
Q Consensus 199 FD~Vis~~~l~~-~~d~~~~l~ei~rvLkpGG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aGF~~v~~~~ 277 (299)
||+|+++..++| ..+...+++++.++|||||.+++..++..... .+.+.+.+ . |..+++..
T Consensus 120 ~D~v~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~----------------~~~~~l~~-~-~~~~~~~~ 181 (194)
T 1dus_A 120 YNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVVIQTKQGAK----------------SLAKYMKD-V-FGNVETVT 181 (194)
T ss_dssp EEEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEEEEESTHHHH----------------HHHHHHHH-H-HSCCEEEE
T ss_pred ceEEEECCCcccchhHHHHHHHHHHHHcCCCCEEEEEECCCCChH----------------HHHHHHHH-H-hcceEEEe
Confidence 999999988887 45778999999999999999999877643221 12223332 2 55565544
Q ss_pred cCCCCCCCCCeEEEEEEe
Q 022305 278 ISPNPGRSDPMYVVYSRK 295 (299)
Q Consensus 278 ~~~~~~~~~p~~~v~arK 295 (299)
.. ..++++.++|
T Consensus 182 ~~------~~~~~~~~~k 193 (194)
T 1dus_A 182 IK------GGYRVLKSKK 193 (194)
T ss_dssp EE------TTEEEEEEEC
T ss_pred cC------CcEEEEEEee
Confidence 22 4678888887
No 102
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.49 E-value=2.3e-13 Score=127.46 Aligned_cols=145 Identities=14% Similarity=0.091 Sum_probs=100.7
Q ss_pred CCceeeccCcCCc--cccCCCCCCCeEEEEeCCHHHHHhcCC--CCcEEEeccCCCCCCCCCCCCeeEEEecccccccCC
Q 022305 138 YSEVFPPSNTPGV--SHFPPGYKQDRIVGMGMNEEELKRNPV--LTEYVVQDLNLNPKLPFEDNSFDVITNVVSVDYLTK 213 (299)
Q Consensus 138 ~~~vLDiGcG~G~--~~~~~~~~~~~v~gvD~S~~ml~~a~~--~~~~~~~D~~~~~~lpf~~~~FD~Vis~~~l~~~~d 213 (299)
..+|||+|||+|. ..+...+++.+++++|+ +.|++.+++ +++++.+|+ .+ +++++ |+|++.+++||+++
T Consensus 204 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~v~~~~~d~---~~-~~p~~--D~v~~~~vlh~~~~ 276 (368)
T 3reo_A 204 LTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQDAPAFSGVEHLGGDM---FD-GVPKG--DAIFIKWICHDWSD 276 (368)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCCTTEEEEECCT---TT-CCCCC--SEEEEESCGGGBCH
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhhhhcCCCEEEecCC---CC-CCCCC--CEEEEechhhcCCH
Confidence 4689999999996 34445567889999999 999998876 488999998 54 66654 99999999999986
Q ss_pred H--HHHHHHHHhhccCCcEEEEEecC-c----chHH----HHHHhhh----hcCCCchhhhHHHHHHHhCCCCCCeeeec
Q 022305 214 P--IEVFKEMCQVLKPGGLAIVSFSN-R----CFWT----KAISIWT----STGDADHVMIVGAYFHYAGGYEPPQAVDI 278 (299)
Q Consensus 214 ~--~~~l~ei~rvLkpGG~lii~~~~-~----~~~~----~~~~~~~----~~~~~~~~~~~~~~~~~~aGF~~v~~~~~ 278 (299)
. .++|++++++|||||.++|.... + .... ....... ..+......-+.+.+ +++||+.+++..+
T Consensus 277 ~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~rt~~e~~~ll-~~AGF~~v~~~~~ 355 (368)
T 3reo_A 277 EHCLKLLKNCYAALPDHGKVIVAEYILPPSPDPSIATKVVIHTDALMLAYNPGGKERTEKEFQALA-MASGFRGFKVASC 355 (368)
T ss_dssp HHHHHHHHHHHHHSCTTCEEEEEECCCCSSCCCCHHHHHHHHHHHHHHHHSSBCCCCCHHHHHHHH-HHTTCCEEEEEEE
T ss_pred HHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhhhHHHhhhHHHHhhcCCCccCCHHHHHHHH-HHCCCeeeEEEEe
Confidence 5 47899999999999988775322 1 1111 1111111 112222222334444 5699999998776
Q ss_pred CCCCCCCCCeEEEEEEec
Q 022305 279 SPNPGRSDPMYVVYSRKA 296 (299)
Q Consensus 279 ~~~~~~~~p~~~v~arK~ 296 (299)
. .+..++.++|+
T Consensus 356 ~------~~~~vie~~k~ 367 (368)
T 3reo_A 356 A------FNTYVMEFLKT 367 (368)
T ss_dssp E------TTEEEEEEECC
T ss_pred C------CCcEEEEEEeC
Confidence 5 34667777764
No 103
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.48 E-value=4.9e-14 Score=131.03 Aligned_cols=154 Identities=10% Similarity=0.076 Sum_probs=101.5
Q ss_pred cCCceeeccCcCCc--cccCCCCCCCeEEEEeCCHHHHHhcCC---------CCcEEEeccCCCCCCCCCCCCeeEEEec
Q 022305 137 YYSEVFPPSNTPGV--SHFPPGYKQDRIVGMGMNEEELKRNPV---------LTEYVVQDLNLNPKLPFEDNSFDVITNV 205 (299)
Q Consensus 137 ~~~~vLDiGcG~G~--~~~~~~~~~~~v~gvD~S~~ml~~a~~---------~~~~~~~D~~~~~~lpf~~~~FD~Vis~ 205 (299)
...+|||+|||+|. ..+....+..+++++|+ +.|++.+++ +++++.+|+ .+ +++. .||+|++.
T Consensus 183 ~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~---~~-~~~~-~~D~v~~~ 256 (360)
T 1tw3_A 183 NVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDF---FE-PLPR-KADAIILS 256 (360)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCT---TS-CCSS-CEEEEEEE
T ss_pred cCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCC---CC-CCCC-CccEEEEc
Confidence 35689999999996 33333446789999999 999987654 478999998 33 3333 39999999
Q ss_pred ccccccCCH--HHHHHHHHhhccCCcEEEEEecC--cc----hHHHHHHhhh---hcCCCchhhhHHHHHHHhCCCCCCe
Q 022305 206 VSVDYLTKP--IEVFKEMCQVLKPGGLAIVSFSN--RC----FWTKAISIWT---STGDADHVMIVGAYFHYAGGYEPPQ 274 (299)
Q Consensus 206 ~~l~~~~d~--~~~l~ei~rvLkpGG~lii~~~~--~~----~~~~~~~~~~---~~~~~~~~~~~~~~~~~~aGF~~v~ 274 (299)
+++||+++. .++++++.++|||||.+++.... +. .+......+. ..+.......+.+.+ +++||+.++
T Consensus 257 ~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll-~~aGf~~~~ 335 (360)
T 1tw3_A 257 FVLLNWPDHDAVRILTRCAEALEPGGRILIHERDDLHENSFNEQFTELDLRMLVFLGGALRTREKWDGLA-ASAGLVVEE 335 (360)
T ss_dssp SCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEECCBCGGGCCSHHHHHHHHHHHHHHSCCCCBHHHHHHHH-HHTTEEEEE
T ss_pred ccccCCCHHHHHHHHHHHHHhcCCCcEEEEEEEeccCCCCCcchhhhccHHHhhhcCCcCCCHHHHHHHH-HHCCCeEEE
Confidence 999999877 58999999999999988876433 11 1222222221 111111222333444 569999998
Q ss_pred eeecCCCCCCCCCeEEEEEEecCC
Q 022305 275 AVDISPNPGRSDPMYVVYSRKAST 298 (299)
Q Consensus 275 ~~~~~~~~~~~~p~~~v~arK~~~ 298 (299)
+..+... +......++.++|+++
T Consensus 336 ~~~~~~~-~~~~~~~~i~~~~~~~ 358 (360)
T 1tw3_A 336 VRQLPSP-TIPYDLSLLVLAPAAT 358 (360)
T ss_dssp EEEEECS-SSSCEEEEEEEEEC--
T ss_pred EEeCCCC-cccCccEEEEEEeCCC
Confidence 8776421 0112257888998765
No 104
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.48 E-value=1.5e-13 Score=128.63 Aligned_cols=147 Identities=12% Similarity=0.060 Sum_probs=100.8
Q ss_pred cCCceeeccCcCCc--cccCCCCCCCeEEEEeCCHHHHHhcCC---------CCcEEEeccCCCCCCCCCCCCeeEEEec
Q 022305 137 YYSEVFPPSNTPGV--SHFPPGYKQDRIVGMGMNEEELKRNPV---------LTEYVVQDLNLNPKLPFEDNSFDVITNV 205 (299)
Q Consensus 137 ~~~~vLDiGcG~G~--~~~~~~~~~~~v~gvD~S~~ml~~a~~---------~~~~~~~D~~~~~~lpf~~~~FD~Vis~ 205 (299)
...+|||+|||+|. ..+...+++.+++++|+ +.+++.+++ +++++.+|+ . .+++. .||+|++.
T Consensus 202 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~---~-~~~p~-~~D~v~~~ 275 (369)
T 3gwz_A 202 GAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGRGLADRCEILPGDF---F-ETIPD-GADVYLIK 275 (369)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCT---T-TCCCS-SCSEEEEE
T ss_pred cCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCC---C-CCCCC-CceEEEhh
Confidence 34689999999996 33344557789999999 999987763 488999998 4 45555 79999999
Q ss_pred ccccccCCHH--HHHHHHHhhccCCcEEEEEecC--c--chHHHHHHh--hhhcCC-CchhhhHHHHHHHhCCCCCCeee
Q 022305 206 VSVDYLTKPI--EVFKEMCQVLKPGGLAIVSFSN--R--CFWTKAISI--WTSTGD-ADHVMIVGAYFHYAGGYEPPQAV 276 (299)
Q Consensus 206 ~~l~~~~d~~--~~l~ei~rvLkpGG~lii~~~~--~--~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~aGF~~v~~~ 276 (299)
+++||++++. ++|++++++|||||.++|.... . ......... +...+. .....-+.+.+ +++||+.+++.
T Consensus 276 ~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~d~~~~~~~~g~~~t~~e~~~ll-~~aGf~~~~~~ 354 (369)
T 3gwz_A 276 HVLHDWDDDDVVRILRRIATAMKPDSRLLVIDNLIDERPAASTLFVDLLLLVLVGGAERSESEFAALL-EKSGLRVERSL 354 (369)
T ss_dssp SCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEEBCCSSCCHHHHHHHHHHHHHHSCCCBCHHHHHHHH-HTTTEEEEEEE
T ss_pred hhhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhHhhHHHHhhcCCccCCHHHHHHHH-HHCCCeEEEEE
Confidence 9999998876 7999999999999988775322 1 111111111 111122 12222333344 66999999886
Q ss_pred ecCCCCCCCCCeEEEEEEe
Q 022305 277 DISPNPGRSDPMYVVYSRK 295 (299)
Q Consensus 277 ~~~~~~~~~~p~~~v~arK 295 (299)
... ..++-++.++|
T Consensus 355 ~~~-----~~~~svie~~~ 368 (369)
T 3gwz_A 355 PCG-----AGPVRIVEIRR 368 (369)
T ss_dssp ECS-----SSSEEEEEEEE
T ss_pred ECC-----CCCcEEEEEEe
Confidence 642 14567777776
No 105
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.47 E-value=3.1e-13 Score=126.56 Aligned_cols=145 Identities=13% Similarity=0.070 Sum_probs=99.5
Q ss_pred CCceeeccCcCCc--cccCCCCCCCeEEEEeCCHHHHHhcCC--CCcEEEeccCCCCCCCCCCCCeeEEEecccccccCC
Q 022305 138 YSEVFPPSNTPGV--SHFPPGYKQDRIVGMGMNEEELKRNPV--LTEYVVQDLNLNPKLPFEDNSFDVITNVVSVDYLTK 213 (299)
Q Consensus 138 ~~~vLDiGcG~G~--~~~~~~~~~~~v~gvD~S~~ml~~a~~--~~~~~~~D~~~~~~lpf~~~~FD~Vis~~~l~~~~d 213 (299)
..+|||+|||+|. ..+....+..+++++|+ +.|++.+++ +++++.+|+ .. ++++ ||+|++.+++||++|
T Consensus 210 ~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~v~~~~~d~---~~-~~~~--~D~v~~~~~lh~~~d 282 (372)
T 1fp1_D 210 ISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAPPLSGIEHVGGDM---FA-SVPQ--GDAMILKAVCHNWSD 282 (372)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCCTTEEEEECCT---TT-CCCC--EEEEEEESSGGGSCH
T ss_pred CCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhhhcCCCEEEeCCc---cc-CCCC--CCEEEEecccccCCH
Confidence 4689999999996 33444456789999999 999998876 488999998 55 5554 999999999999998
Q ss_pred HH--HHHHHHHhhccCCcEEEEEe---cCcch------HHHHHHhh---hhcCCCchhhhHHHHHHHhCCCCCCeeeecC
Q 022305 214 PI--EVFKEMCQVLKPGGLAIVSF---SNRCF------WTKAISIW---TSTGDADHVMIVGAYFHYAGGYEPPQAVDIS 279 (299)
Q Consensus 214 ~~--~~l~ei~rvLkpGG~lii~~---~~~~~------~~~~~~~~---~~~~~~~~~~~~~~~~~~~aGF~~v~~~~~~ 279 (299)
+. ++|++++++|||||.++|.. +.... .......+ ...+......-+.+.+ +++||+.+++....
T Consensus 283 ~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll-~~aGf~~~~~~~~~ 361 (372)
T 1fp1_D 283 EKCIEFLSNCHKALSPNGKVIIVEFILPEEPNTSEESKLVSTLDNLMFITVGGRERTEKQYEKLS-KLSGFSKFQVACRA 361 (372)
T ss_dssp HHHHHHHHHHHHHEEEEEEEEEEEEEECSSCCSSHHHHHHHHHHHHHHHHHSCCCEEHHHHHHHH-HHTTCSEEEEEEEE
T ss_pred HHHHHHHHHHHHhcCCCCEEEEEEeccCCCCccchHHHHHHHhhHHHHhccCCccCCHHHHHHHH-HHCCCceEEEEEcC
Confidence 87 99999999999999888762 22111 11112221 1112222222333344 56999999887754
Q ss_pred CCCCCCCCeEEEEEEe
Q 022305 280 PNPGRSDPMYVVYSRK 295 (299)
Q Consensus 280 ~~~~~~~p~~~v~arK 295 (299)
+ .++.++.++|
T Consensus 362 ~-----~~~~vie~~~ 372 (372)
T 1fp1_D 362 F-----NSLGVMEFYK 372 (372)
T ss_dssp T-----TTEEEEEEEC
T ss_pred C-----CCeEEEEEeC
Confidence 2 1235665554
No 106
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.47 E-value=4.2e-14 Score=130.12 Aligned_cols=145 Identities=12% Similarity=0.090 Sum_probs=99.9
Q ss_pred CceeeccCcCCc--cccCCCCCCCeEEEEeCCHHHHHhcCC---------CCcEEEeccCCCCCCCCCCCCeeEEEeccc
Q 022305 139 SEVFPPSNTPGV--SHFPPGYKQDRIVGMGMNEEELKRNPV---------LTEYVVQDLNLNPKLPFEDNSFDVITNVVS 207 (299)
Q Consensus 139 ~~vLDiGcG~G~--~~~~~~~~~~~v~gvD~S~~ml~~a~~---------~~~~~~~D~~~~~~lpf~~~~FD~Vis~~~ 207 (299)
.+|||+|||+|. ..+....++.+++++|+ +.|++.+++ +++++.+|+ .+ +++ ++||+|++.++
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~---~~-~~~-~~~D~v~~~~v 242 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDM---LQ-EVP-SNGDIYLLSRI 242 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCT---TT-CCC-SSCSEEEEESC
T ss_pred CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCC---CC-CCC-CCCCEEEEchh
Confidence 699999999996 33333446789999999 999987654 378999998 44 454 67999999999
Q ss_pred ccccCCHH--HHHHHHHhhccCCcEEEEEecC---c--chHHHHHHh--hh-hcCCCchhhhHHHHHHHhCCCCCCeeee
Q 022305 208 VDYLTKPI--EVFKEMCQVLKPGGLAIVSFSN---R--CFWTKAISI--WT-STGDADHVMIVGAYFHYAGGYEPPQAVD 277 (299)
Q Consensus 208 l~~~~d~~--~~l~ei~rvLkpGG~lii~~~~---~--~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~aGF~~v~~~~ 277 (299)
+||+++.. +++++++++|||||.+++.... . ......+.. +. ..+.......+.+.+ +++||+.+++..
T Consensus 243 l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll-~~aGf~~~~~~~ 321 (334)
T 2ip2_A 243 IGDLDEAASLRLLGNCREAMAGDGRVVVIERTISASEPSPMSVLWDVHLFMACAGRHRTTEEVVDLL-GRGGFAVERIVD 321 (334)
T ss_dssp GGGCCHHHHHHHHHHHHHHSCTTCEEEEEECCBCSSSCCHHHHHHHHHHHHHHSCCCCBHHHHHHHH-HHTTEEEEEEEE
T ss_pred ccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhHHhhhHhHhhCCCcCCCHHHHHHHH-HHCCCceeEEEE
Confidence 99998776 9999999999999988876432 1 111111111 11 112222223334444 568999988876
Q ss_pred cCCCCCCCCCeEEEEEEec
Q 022305 278 ISPNPGRSDPMYVVYSRKA 296 (299)
Q Consensus 278 ~~~~~~~~~p~~~v~arK~ 296 (299)
.. .+..++.++|.
T Consensus 322 ~~------~~~~~i~~~~~ 334 (334)
T 2ip2_A 322 LP------METRMIVAARA 334 (334)
T ss_dssp ET------TTEEEEEEEEC
T ss_pred CC------CCCEEEEEEeC
Confidence 42 24677888773
No 107
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.46 E-value=4.3e-14 Score=123.56 Aligned_cols=141 Identities=13% Similarity=0.112 Sum_probs=93.0
Q ss_pred CCceeeccCcCCcccc--CCCC-CCCeEEEEeCCHHHHH----hcC--CCCcEEEeccCCCCC---CCCCCCCeeEEEec
Q 022305 138 YSEVFPPSNTPGVSHF--PPGY-KQDRIVGMGMNEEELK----RNP--VLTEYVVQDLNLNPK---LPFEDNSFDVITNV 205 (299)
Q Consensus 138 ~~~vLDiGcG~G~~~~--~~~~-~~~~v~gvD~S~~ml~----~a~--~~~~~~~~D~~~~~~---lpf~~~~FD~Vis~ 205 (299)
..+|||+|||+|.... .... +..+|+|+|+|+.|++ .++ .+++++.+|+ .. +++.+++||+|++.
T Consensus 78 ~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~~~v~~~~~d~---~~~~~~~~~~~~~D~V~~~ 154 (233)
T 2ipx_A 78 GAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKRTNIIPVIEDA---RHPHKYRMLIAMVDVIFAD 154 (233)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHCTTEEEECSCT---TCGGGGGGGCCCEEEEEEC
T ss_pred CCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhccCCeEEEEccc---CChhhhcccCCcEEEEEEc
Confidence 4689999999997322 2222 3579999999977544 443 3578899998 54 56667899999996
Q ss_pred ccccccCCHHHHHHHHHhhccCCcEEEEEecCcchHHHHHHhhhhcCCCchhhhHHHHHH--HhCCCCCCeeeecCCCCC
Q 022305 206 VSVDYLTKPIEVFKEMCQVLKPGGLAIVSFSNRCFWTKAISIWTSTGDADHVMIVGAYFH--YAGGYEPPQAVDISPNPG 283 (299)
Q Consensus 206 ~~l~~~~d~~~~l~ei~rvLkpGG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~aGF~~v~~~~~~~~~~ 283 (299)
.. .......++.++.++|||||.+++++.... .. ........+.+... .++||+.+++..+.+-+
T Consensus 155 ~~--~~~~~~~~~~~~~~~LkpgG~l~i~~~~~~---------~~-~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~~- 221 (233)
T 2ipx_A 155 VA--QPDQTRIVALNAHTFLRNGGHFVISIKANC---------ID-STASAEAVFASEVKKMQQENMKPQEQLTLEPYE- 221 (233)
T ss_dssp CC--CTTHHHHHHHHHHHHEEEEEEEEEEEEHHH---------HC-SSSCHHHHHHHHHHTTGGGTEEEEEEEECTTTS-
T ss_pred CC--CccHHHHHHHHHHHHcCCCeEEEEEEcccc---------cc-cCCCHHHHHHHHHHHHHHCCCceEEEEecCCcc-
Confidence 54 222335568899999999999999755311 00 00111111222122 56899998877776543
Q ss_pred CCCCeEEEEEEec
Q 022305 284 RSDPMYVVYSRKA 296 (299)
Q Consensus 284 ~~~p~~~v~arK~ 296 (299)
...+++++++.
T Consensus 222 --~~~~~v~~~~~ 232 (233)
T 2ipx_A 222 --RDHAVVVGVYR 232 (233)
T ss_dssp --SSEEEEEEEEC
T ss_pred --CCcEEEEEEeC
Confidence 46788888875
No 108
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.46 E-value=1.9e-14 Score=129.35 Aligned_cols=136 Identities=14% Similarity=0.176 Sum_probs=97.0
Q ss_pred cCCceeeccCcCCcccc--CCC-CCCCeEEEEeCCHHHHHhcCC---------CCcEEEeccCCCCCCCCCCCCeeEEEe
Q 022305 137 YYSEVFPPSNTPGVSHF--PPG-YKQDRIVGMGMNEEELKRNPV---------LTEYVVQDLNLNPKLPFEDNSFDVITN 204 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~~~--~~~-~~~~~v~gvD~S~~ml~~a~~---------~~~~~~~D~~~~~~lpf~~~~FD~Vis 204 (299)
...+|||+|||+|.... ... .++.+|+|+|+|+.+++.+++ +++++.+|+ .. ++++++||+|++
T Consensus 110 ~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~---~~-~~~~~~fD~Vi~ 185 (275)
T 1yb2_A 110 PGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDI---AD-FISDQMYDAVIA 185 (275)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCT---TT-CCCSCCEEEEEE
T ss_pred CcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECch---hc-cCcCCCccEEEE
Confidence 34689999999996332 222 346899999999999986543 367888888 44 666789999998
Q ss_pred cccccccCCHHHHHHHHHhhccCCcEEEEEecCcchHHHHHHhhhhcCCCchhhhHHHHHHHhCCCCCCeeeecCCCC--
Q 022305 205 VVSVDYLTKPIEVFKEMCQVLKPGGLAIVSFSNRCFWTKAISIWTSTGDADHVMIVGAYFHYAGGYEPPQAVDISPNP-- 282 (299)
Q Consensus 205 ~~~l~~~~d~~~~l~ei~rvLkpGG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aGF~~v~~~~~~~~~-- 282 (299)
+++++..+++++.++|||||.+++..++...... ..+.+ ...||..+++.+.....
T Consensus 186 -----~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~----------------~~~~l-~~~Gf~~~~~~~~~~~~~~ 243 (275)
T 1yb2_A 186 -----DIPDPWNHVQKIASMMKPGSVATFYLPNFDQSEK----------------TVLSL-SASGMHHLETVELMKRRIL 243 (275)
T ss_dssp -----CCSCGGGSHHHHHHTEEEEEEEEEEESSHHHHHH----------------HHHHS-GGGTEEEEEEEEEEECCCC
T ss_pred -----cCcCHHHHHHHHHHHcCCCCEEEEEeCCHHHHHH----------------HHHHH-HHCCCeEEEEEEEecceeE
Confidence 6788899999999999999999998765421111 11222 34678877776642211
Q ss_pred -----------CCCCCeEEEEEEecCC
Q 022305 283 -----------GRSDPMYVVYSRKAST 298 (299)
Q Consensus 283 -----------~~~~p~~~v~arK~~~ 298 (299)
....+.|++.|||++.
T Consensus 244 ~~~~~~rp~~~~~~~~~~li~ark~~~ 270 (275)
T 1yb2_A 244 VREGATRPASDDLTHTAFITFAIKKSG 270 (275)
T ss_dssp CCTTCCCCGGGGSCEEEEEEEEEECCS
T ss_pred ecCCccccccccCCCcEEEEEEEehhc
Confidence 1235779999999875
No 109
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.46 E-value=6.7e-13 Score=124.15 Aligned_cols=144 Identities=12% Similarity=0.086 Sum_probs=99.2
Q ss_pred CCceeeccCcCCc--cccCCCCCCCeEEEEeCCHHHHHhcCC--CCcEEEeccCCCCCCCCCCCCeeEEEecccccccCC
Q 022305 138 YSEVFPPSNTPGV--SHFPPGYKQDRIVGMGMNEEELKRNPV--LTEYVVQDLNLNPKLPFEDNSFDVITNVVSVDYLTK 213 (299)
Q Consensus 138 ~~~vLDiGcG~G~--~~~~~~~~~~~v~gvD~S~~ml~~a~~--~~~~~~~D~~~~~~lpf~~~~FD~Vis~~~l~~~~d 213 (299)
..+|||+|||+|. ..+...+++.+++++|+ +.|++.+++ +++++.+|+ .+ |++++ |+|++.+++|++++
T Consensus 202 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~v~~~~~D~---~~-~~p~~--D~v~~~~vlh~~~d 274 (364)
T 3p9c_A 202 LGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVISEAPQFPGVTHVGGDM---FK-EVPSG--DTILMKWILHDWSD 274 (364)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCCTTEEEEECCT---TT-CCCCC--SEEEEESCGGGSCH
T ss_pred CCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHHHhhhhcCCeEEEeCCc---CC-CCCCC--CEEEehHHhccCCH
Confidence 4689999999996 44445567889999999 999998876 489999998 55 66654 99999999999975
Q ss_pred H--HHHHHHHHhhccCCcEEEEEecC---cc--h-HH---HHHH--hh-hhcCCC-chhhhHHHHHHHhCCCCCCeeeec
Q 022305 214 P--IEVFKEMCQVLKPGGLAIVSFSN---RC--F-WT---KAIS--IW-TSTGDA-DHVMIVGAYFHYAGGYEPPQAVDI 278 (299)
Q Consensus 214 ~--~~~l~ei~rvLkpGG~lii~~~~---~~--~-~~---~~~~--~~-~~~~~~-~~~~~~~~~~~~~aGF~~v~~~~~ 278 (299)
. .++|++++++|||||.++|.... .. . .. .... .. ...+.. ....-+.+.+ +++||+.+++..+
T Consensus 275 ~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~m~~~~~~g~~rt~~e~~~ll-~~AGF~~v~~~~~ 353 (364)
T 3p9c_A 275 QHCATLLKNCYDALPAHGKVVLVQCILPVNPEANPSSQGVFHVDMIMLAHNPGGRERYEREFQALA-RGAGFTGVKSTYI 353 (364)
T ss_dssp HHHHHHHHHHHHHSCTTCEEEEEECCBCSSCCSSHHHHHHHHHHHHHHHHCSSCCCCBHHHHHHHH-HHTTCCEEEEEEE
T ss_pred HHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCcchhhhhHHHhHHHHHhcccCCccCCHHHHHHHH-HHCCCceEEEEEc
Confidence 4 58999999999999988775322 10 1 10 1111 11 111222 2222334444 5699999998776
Q ss_pred CCCCCCCCCeEEEEEEe
Q 022305 279 SPNPGRSDPMYVVYSRK 295 (299)
Q Consensus 279 ~~~~~~~~p~~~v~arK 295 (299)
.. +..++.+.|
T Consensus 354 ~~------~~~vie~~k 364 (364)
T 3p9c_A 354 YA------NAWAIEFTK 364 (364)
T ss_dssp ET------TEEEEEEEC
T ss_pred CC------ceEEEEEeC
Confidence 52 455665554
No 110
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.46 E-value=6.8e-14 Score=120.42 Aligned_cols=134 Identities=9% Similarity=-0.013 Sum_probs=91.5
Q ss_pred cCCceeeccCcCCccccCCCCCCCeEEEEeCCHHHHHhcCC---------CCcEEEeccCCCCCCCCCCCCeeEEEeccc
Q 022305 137 YYSEVFPPSNTPGVSHFPPGYKQDRIVGMGMNEEELKRNPV---------LTEYVVQDLNLNPKLPFEDNSFDVITNVVS 207 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~~~~~~~~~~~v~gvD~S~~ml~~a~~---------~~~~~~~D~~~~~~lpf~~~~FD~Vis~~~ 207 (299)
...+|||+|||+|.........+.+|+|+|+|+.|++.+++ +++++.+|+ .+.......||+|++..+
T Consensus 55 ~~~~vLDlGcG~G~~~~~la~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~---~~~~~~~~~~D~v~~~~~ 131 (204)
T 3njr_A 55 RGELLWDIGGGSGSVSVEWCLAGGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTA---PAALADLPLPEAVFIGGG 131 (204)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCT---TGGGTTSCCCSEEEECSC
T ss_pred CCCEEEEecCCCCHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCch---hhhcccCCCCCEEEECCc
Confidence 44689999999997433222227899999999999987654 367888998 553223457999998875
Q ss_pred ccccCCHHHHHHHHHhhccCCcEEEEEecCcchHHHHHHhhhhcCCCchhhhHHHHHHHhCCCCCCeeeecCCCC-----
Q 022305 208 VDYLTKPIEVFKEMCQVLKPGGLAIVSFSNRCFWTKAISIWTSTGDADHVMIVGAYFHYAGGYEPPQAVDISPNP----- 282 (299)
Q Consensus 208 l~~~~d~~~~l~ei~rvLkpGG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aGF~~v~~~~~~~~~----- 282 (299)
+ ++. +++++.++|||||.+++.........+ ..+++.. .||+..++.-....+
T Consensus 132 ~----~~~-~l~~~~~~LkpgG~lv~~~~~~~~~~~----------------~~~~l~~-~g~~i~~i~~~~~~~~~~~~ 189 (204)
T 3njr_A 132 G----SQA-LYDRLWEWLAPGTRIVANAVTLESETL----------------LTQLHAR-HGGQLLRIDIAQAEPLGRMR 189 (204)
T ss_dssp C----CHH-HHHHHHHHSCTTCEEEEEECSHHHHHH----------------HHHHHHH-HCSEEEEEEEEEEEEETTEE
T ss_pred c----cHH-HHHHHHHhcCCCcEEEEEecCcccHHH----------------HHHHHHh-CCCcEEEEEeecccccCccc
Confidence 4 566 999999999999999998765432222 2223322 456554433221111
Q ss_pred --CCCCCeEEEEEEe
Q 022305 283 --GRSDPMYVVYSRK 295 (299)
Q Consensus 283 --~~~~p~~~v~arK 295 (299)
....|.+++.++|
T Consensus 190 ~~~~~~Pv~i~~~~~ 204 (204)
T 3njr_A 190 GWSASRPQLQWSGQR 204 (204)
T ss_dssp EECCCCCEEEEEEEC
T ss_pred eeecCCCEEEEEecC
Confidence 3467999999887
No 111
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.45 E-value=3.9e-14 Score=121.08 Aligned_cols=130 Identities=10% Similarity=0.095 Sum_probs=92.4
Q ss_pred hcCCceeeccCcCCccccCC-CCCCCeEEEEeCCHHHHHhcCCC--------CcEEEeccCCCCCCCCCCCCeeEEEecc
Q 022305 136 KYYSEVFPPSNTPGVSHFPP-GYKQDRIVGMGMNEEELKRNPVL--------TEYVVQDLNLNPKLPFEDNSFDVITNVV 206 (299)
Q Consensus 136 ~~~~~vLDiGcG~G~~~~~~-~~~~~~v~gvD~S~~ml~~a~~~--------~~~~~~D~~~~~~lpf~~~~FD~Vis~~ 206 (299)
+...+|||+|||+|...... ..+..+++|+|+|+.|++.++++ ++++.+|+ .. +.+++||+|+++.
T Consensus 59 ~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~---~~--~~~~~fD~i~~~~ 133 (205)
T 3grz_A 59 VKPLTVADVGTGSGILAIAAHKLGAKSVLATDISDESMTAAEENAALNGIYDIALQKTSL---LA--DVDGKFDLIVANI 133 (205)
T ss_dssp SSCCEEEEETCTTSHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESST---TT--TCCSCEEEEEEES
T ss_pred cCCCEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEeccc---cc--cCCCCceEEEECC
Confidence 34578999999999633222 23446999999999999877653 78888888 44 3468999999998
Q ss_pred cccccCCHHHHHHHHHhhccCCcEEEEEecCcchHHHHHHhhhhcCCCchhhhHHHHHHHhCCCCCCeeeecCCCCCCCC
Q 022305 207 SVDYLTKPIEVFKEMCQVLKPGGLAIVSFSNRCFWTKAISIWTSTGDADHVMIVGAYFHYAGGYEPPQAVDISPNPGRSD 286 (299)
Q Consensus 207 ~l~~~~d~~~~l~ei~rvLkpGG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aGF~~v~~~~~~~~~~~~~ 286 (299)
.++++ ..+++++.++|||||.+++...... ....+.+.+ ..+||+.+++... +
T Consensus 134 ~~~~~---~~~l~~~~~~L~~gG~l~~~~~~~~----------------~~~~~~~~~-~~~Gf~~~~~~~~-------~ 186 (205)
T 3grz_A 134 LAEIL---LDLIPQLDSHLNEDGQVIFSGIDYL----------------QLPKIEQAL-AENSFQIDLKMRA-------G 186 (205)
T ss_dssp CHHHH---HHHGGGSGGGEEEEEEEEEEEEEGG----------------GHHHHHHHH-HHTTEEEEEEEEE-------T
T ss_pred cHHHH---HHHHHHHHHhcCCCCEEEEEecCcc----------------cHHHHHHHH-HHcCCceEEeecc-------C
Confidence 88764 7889999999999999988643222 112233334 4588998776542 3
Q ss_pred CeEEEEEEecC
Q 022305 287 PMYVVYSRKAS 297 (299)
Q Consensus 287 p~~~v~arK~~ 297 (299)
.++.++.+++.
T Consensus 187 ~w~~~~~~~~~ 197 (205)
T 3grz_A 187 RWIGLAISRKH 197 (205)
T ss_dssp TEEEEEEEECC
T ss_pred CEEEEEEeccc
Confidence 56666666653
No 112
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.45 E-value=2.8e-13 Score=125.80 Aligned_cols=91 Identities=9% Similarity=0.059 Sum_probs=76.2
Q ss_pred CCceeeccCcCCc--cccCCCCCCCeEEEEeCCHHHHHhcCC--CCcEEEeccCCCCCCCCCCCCeeEEEecccccccCC
Q 022305 138 YSEVFPPSNTPGV--SHFPPGYKQDRIVGMGMNEEELKRNPV--LTEYVVQDLNLNPKLPFEDNSFDVITNVVSVDYLTK 213 (299)
Q Consensus 138 ~~~vLDiGcG~G~--~~~~~~~~~~~v~gvD~S~~ml~~a~~--~~~~~~~D~~~~~~lpf~~~~FD~Vis~~~l~~~~d 213 (299)
..+|||+|||+|. ..+...+++.+++++|+ +.|++.+++ .++++.+|+ .. ++++ ||+|++.+++||++|
T Consensus 189 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~v~~~~~d~---~~-~~p~--~D~v~~~~~lh~~~d 261 (352)
T 1fp2_A 189 LESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLSGSNNLTYVGGDM---FT-SIPN--ADAVLLKYILHNWTD 261 (352)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCBTTEEEEECCT---TT-CCCC--CSEEEEESCGGGSCH
T ss_pred CceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhcccCCCcEEEeccc---cC-CCCC--ccEEEeehhhccCCH
Confidence 4789999999996 33344456789999999 999999876 488899998 44 4543 999999999999998
Q ss_pred HH--HHHHHHHhhccC---CcEEEEEe
Q 022305 214 PI--EVFKEMCQVLKP---GGLAIVSF 235 (299)
Q Consensus 214 ~~--~~l~ei~rvLkp---GG~lii~~ 235 (299)
+. ++|++++++||| ||.++|..
T Consensus 262 ~~~~~~l~~~~~~L~p~~~gG~l~i~e 288 (352)
T 1fp2_A 262 KDCLRILKKCKEAVTNDGKRGKVTIID 288 (352)
T ss_dssp HHHHHHHHHHHHHHSGGGCCCEEEEEE
T ss_pred HHHHHHHHHHHHhCCCCCCCcEEEEEE
Confidence 87 999999999999 99887764
No 113
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.45 E-value=2e-14 Score=128.21 Aligned_cols=100 Identities=12% Similarity=0.036 Sum_probs=76.9
Q ss_pred hcCCceeeccCcCCcccc--CCCC-CCCeEEEEeCCHH------HHHhcCC---------CCcEEEec-cCCCCCCCCCC
Q 022305 136 KYYSEVFPPSNTPGVSHF--PPGY-KQDRIVGMGMNEE------ELKRNPV---------LTEYVVQD-LNLNPKLPFED 196 (299)
Q Consensus 136 ~~~~~vLDiGcG~G~~~~--~~~~-~~~~v~gvD~S~~------ml~~a~~---------~~~~~~~D-~~~~~~lpf~~ 196 (299)
+...+|||+|||+|.... .... +..+|+|+|+|+. |++.+++ +++++.+| .. ...+|+++
T Consensus 42 ~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~~~~~ 120 (275)
T 3bkx_A 42 KPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNTNLS-DDLGPIAD 120 (275)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSCCTT-TCCGGGTT
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECChhh-hccCCCCC
Confidence 345689999999996322 2221 3479999999997 8876543 36788887 20 15678889
Q ss_pred CCeeEEEecccccccCCHHHHHHHHHhhccCCcEEEEEec
Q 022305 197 NSFDVITNVVSVDYLTKPIEVFKEMCQVLKPGGLAIVSFS 236 (299)
Q Consensus 197 ~~FD~Vis~~~l~~~~d~~~~l~ei~rvLkpGG~lii~~~ 236 (299)
++||+|++..+++|++++..+++.+.++++|||.+++...
T Consensus 121 ~~fD~v~~~~~l~~~~~~~~~~~~~~~l~~~gG~l~~~~~ 160 (275)
T 3bkx_A 121 QHFDRVVLAHSLWYFASANALALLFKNMAAVCDHVDVAEW 160 (275)
T ss_dssp CCCSEEEEESCGGGSSCHHHHHHHHHHHTTTCSEEEEEEE
T ss_pred CCEEEEEEccchhhCCCHHHHHHHHHHHhCCCCEEEEEEe
Confidence 9999999999999999999877777777788999888653
No 114
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.44 E-value=1.2e-13 Score=123.00 Aligned_cols=150 Identities=16% Similarity=0.151 Sum_probs=103.2
Q ss_pred cHHHHHHhhh---cCCceeeccCcCCccccCC-CCCCCeEEEEeCCHHHHHhcCC---------CCcEEEeccCCCCCCC
Q 022305 127 DDPAIAALTK---YYSEVFPPSNTPGVSHFPP-GYKQDRIVGMGMNEEELKRNPV---------LTEYVVQDLNLNPKLP 193 (299)
Q Consensus 127 ~~~~~~~l~~---~~~~vLDiGcG~G~~~~~~-~~~~~~v~gvD~S~~ml~~a~~---------~~~~~~~D~~~~~~lp 193 (299)
+..++..+.. ...+|||+|||+|...+.. .....+|+|+|+++.|++.+++ +++++++|+ .+++
T Consensus 36 d~~ll~~~~~~~~~~~~vLDlG~G~G~~~~~la~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~---~~~~ 112 (259)
T 3lpm_A 36 DAVLLAKFSYLPIRKGKIIDLCSGNGIIPLLLSTRTKAKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDL---KKIT 112 (259)
T ss_dssp HHHHHHHHCCCCSSCCEEEETTCTTTHHHHHHHTTCCCEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCG---GGGG
T ss_pred HHHHHHHHhcCCCCCCEEEEcCCchhHHHHHHHHhcCCcEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcH---HHhh
Confidence 3444555533 4578999999999733322 2223499999999999997765 267888998 5554
Q ss_pred --CCCCCeeEEEeccccccc--------------------CCHHHHHHHHHhhccCCcEEEEEecCcchHHHHHHhhhhc
Q 022305 194 --FEDNSFDVITNVVSVDYL--------------------TKPIEVFKEMCQVLKPGGLAIVSFSNRCFWTKAISIWTST 251 (299)
Q Consensus 194 --f~~~~FD~Vis~~~l~~~--------------------~d~~~~l~ei~rvLkpGG~lii~~~~~~~~~~~~~~~~~~ 251 (299)
+++++||+|+++-.+... .+...+++++.++|||||.+++..+...
T Consensus 113 ~~~~~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~------------ 180 (259)
T 3lpm_A 113 DLIPKERADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHRPER------------ 180 (259)
T ss_dssp GTSCTTCEEEEEECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEEEECTTT------------
T ss_pred hhhccCCccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEEcHHH------------
Confidence 567899999997443222 1346799999999999999988654321
Q ss_pred CCCchhhhHHHHHHHhCCCCCCeeeecCCCCCCCCCeEEEEEEecC
Q 022305 252 GDADHVMIVGAYFHYAGGYEPPQAVDISPNPGRSDPMYVVYSRKAS 297 (299)
Q Consensus 252 ~~~~~~~~~~~~~~~~aGF~~v~~~~~~~~~~~~~p~~~v~arK~~ 297 (299)
..-+...+ ...||....+..+.+.++......++.++|.+
T Consensus 181 -----~~~~~~~l-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~k~~ 220 (259)
T 3lpm_A 181 -----LLDIIDIM-RKYRLEPKRIQFVHPRSDREANTVLVEGIKDG 220 (259)
T ss_dssp -----HHHHHHHH-HHTTEEEEEEEEEESSTTSCCSEEEEEEEETC
T ss_pred -----HHHHHHHH-HHCCCceEEEEEeecCCCCCcEEEEEEEEeCC
Confidence 11112223 44789988888887777666667888888854
No 115
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.44 E-value=3.3e-14 Score=127.36 Aligned_cols=97 Identities=12% Similarity=0.009 Sum_probs=75.6
Q ss_pred cCCceeeccCcCCccccCCCCCCCeEEEEeCCHHHHHhcCCCC--cEEEeccCCCCCCCC-----CCCCeeEEEeccccc
Q 022305 137 YYSEVFPPSNTPGVSHFPPGYKQDRIVGMGMNEEELKRNPVLT--EYVVQDLNLNPKLPF-----EDNSFDVITNVVSVD 209 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~~~~~~~~~~~v~gvD~S~~ml~~a~~~~--~~~~~D~~~~~~lpf-----~~~~FD~Vis~~~l~ 209 (299)
...+|||+|||+|.........+.+|+|+|+|+.|++.++++. .++..++ ..++. .+++||+|+++.+++
T Consensus 45 ~g~~VLDlGcGtG~~a~~La~~g~~V~gvD~S~~ml~~Ar~~~~~~~v~~~~---~~~~~~~~~~~~~~fD~Vv~~~~l~ 121 (261)
T 3iv6_A 45 PGSTVAVIGASTRFLIEKALERGASVTVFDFSQRMCDDLAEALADRCVTIDL---LDITAEIPKELAGHFDFVLNDRLIN 121 (261)
T ss_dssp TTCEEEEECTTCHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTSSSCCEEEE---CCTTSCCCGGGTTCCSEEEEESCGG
T ss_pred CcCEEEEEeCcchHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHhccceeee---eecccccccccCCCccEEEEhhhhH
Confidence 3468999999999744444445789999999999999887642 2455555 34333 257899999999999
Q ss_pred ccC--CHHHHHHHHHhhccCCcEEEEEecC
Q 022305 210 YLT--KPIEVFKEMCQVLKPGGLAIVSFSN 237 (299)
Q Consensus 210 ~~~--d~~~~l~ei~rvLkpGG~lii~~~~ 237 (299)
|+. +...+++++.++| |||.+++++..
T Consensus 122 ~~~~~~~~~~l~~l~~lL-PGG~l~lS~~~ 150 (261)
T 3iv6_A 122 RFTTEEARRACLGMLSLV-GSGTVRASVKL 150 (261)
T ss_dssp GSCHHHHHHHHHHHHHHH-TTSEEEEEEEB
T ss_pred hCCHHHHHHHHHHHHHhC-cCcEEEEEecc
Confidence 985 5678999999999 99999998654
No 116
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.44 E-value=8.4e-15 Score=137.80 Aligned_cols=102 Identities=13% Similarity=0.166 Sum_probs=79.8
Q ss_pred HHHhhhcCCceeeccCc------CCccc--cCCC-CCCCeEEEEeCCHHHHHhcCCCCcEEEeccCCCCCCCCC------
Q 022305 131 IAALTKYYSEVFPPSNT------PGVSH--FPPG-YKQDRIVGMGMNEEELKRNPVLTEYVVQDLNLNPKLPFE------ 195 (299)
Q Consensus 131 ~~~l~~~~~~vLDiGcG------~G~~~--~~~~-~~~~~v~gvD~S~~ml~~a~~~~~~~~~D~~~~~~lpf~------ 195 (299)
+..+.....+|||+||| +|... +... .++++|+|+|+|+.|.. ...+++++++|+ .++++.
T Consensus 210 L~~l~~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~~-~~~rI~fv~GDa---~dlpf~~~l~~~ 285 (419)
T 3sso_A 210 FRDYRNQQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSHV-DELRIRTIQGDQ---NDAEFLDRIARR 285 (419)
T ss_dssp HGGGTTSCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGGG-CBTTEEEEECCT---TCHHHHHHHHHH
T ss_pred HHhhcCCCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHhh-cCCCcEEEEecc---cccchhhhhhcc
Confidence 33344456799999999 44322 2222 36789999999999953 345699999999 888887
Q ss_pred CCCeeEEEecccccccCCHHHHHHHHHhhccCCcEEEEEecC
Q 022305 196 DNSFDVITNVVSVDYLTKPIEVFKEMCQVLKPGGLAIVSFSN 237 (299)
Q Consensus 196 ~~~FD~Vis~~~l~~~~d~~~~l~ei~rvLkpGG~lii~~~~ 237 (299)
+++||+|+|.. .|+..+..++|++++|+|||||+++++...
T Consensus 286 d~sFDlVisdg-sH~~~d~~~aL~el~rvLKPGGvlVi~Dl~ 326 (419)
T 3sso_A 286 YGPFDIVIDDG-SHINAHVRTSFAALFPHVRPGGLYVIEDMW 326 (419)
T ss_dssp HCCEEEEEECS-CCCHHHHHHHHHHHGGGEEEEEEEEEECGG
T ss_pred cCCccEEEECC-cccchhHHHHHHHHHHhcCCCeEEEEEecc
Confidence 78999999975 577788999999999999999999998554
No 117
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.44 E-value=4.9e-14 Score=123.40 Aligned_cols=104 Identities=13% Similarity=0.145 Sum_probs=72.6
Q ss_pred HHHHHHhhhcCCceeeccCcCCccccC--CCCCCCeEEEEeCC-HHHHHhc---CC--------CCcEEEeccCCCCCCC
Q 022305 128 DPAIAALTKYYSEVFPPSNTPGVSHFP--PGYKQDRIVGMGMN-EEELKRN---PV--------LTEYVVQDLNLNPKLP 193 (299)
Q Consensus 128 ~~~~~~l~~~~~~vLDiGcG~G~~~~~--~~~~~~~v~gvD~S-~~ml~~a---~~--------~~~~~~~D~~~~~~lp 193 (299)
+.+.+.+.+...+|||+|||+|..... ...++.+|+|+|+| +.|++.| ++ +++++++|+ +.+|
T Consensus 15 ~~~~~~~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~---~~l~ 91 (225)
T 3p2e_A 15 DELTEIIGQFDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAA---ESLP 91 (225)
T ss_dssp HHHHHHHTTCSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBT---TBCC
T ss_pred HHHHHHhCCCCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCH---HHhh
Confidence 334444455567899999999974433 23678899999999 7787665 43 367888998 7775
Q ss_pred CC-CCCeeEEEecccccc-----cCCHHHHHHHHHhhccCCcEEEEE
Q 022305 194 FE-DNSFDVITNVVSVDY-----LTKPIEVFKEMCQVLKPGGLAIVS 234 (299)
Q Consensus 194 f~-~~~FD~Vis~~~l~~-----~~d~~~~l~ei~rvLkpGG~lii~ 234 (299)
.. .+.+|.|.++....+ ..+...+|++++|+|||||.+++.
T Consensus 92 ~~~~d~v~~i~~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i~ 138 (225)
T 3p2e_A 92 FELKNIADSISILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEFV 138 (225)
T ss_dssp GGGTTCEEEEEEESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEEE
T ss_pred hhccCeEEEEEEeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEEE
Confidence 32 245666655543221 234567999999999999998883
No 118
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.44 E-value=1.8e-13 Score=118.06 Aligned_cols=102 Identities=14% Similarity=0.092 Sum_probs=80.1
Q ss_pred hhhcCCceeeccCcCCccc--cCCCCCCCeEEEEeCCHHHHHhcCC--------CCcEEEeccCCCCCCC--CCCCCeeE
Q 022305 134 LTKYYSEVFPPSNTPGVSH--FPPGYKQDRIVGMGMNEEELKRNPV--------LTEYVVQDLNLNPKLP--FEDNSFDV 201 (299)
Q Consensus 134 l~~~~~~vLDiGcG~G~~~--~~~~~~~~~v~gvD~S~~ml~~a~~--------~~~~~~~D~~~~~~lp--f~~~~FD~ 201 (299)
+.+...+|||+|||+|... +....++.+++|+|+|+.|++.+++ +++++.+|+ ..++ +++++||+
T Consensus 38 f~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~---~~~~~~~~~~~~D~ 114 (214)
T 1yzh_A 38 FGNDNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDG---SDLTDYFEDGEIDR 114 (214)
T ss_dssp HTSCCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCS---SCGGGTSCTTCCSE
T ss_pred cCCCCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCH---HHHHhhcCCCCCCE
Confidence 3344568999999999733 3344467899999999999987654 478999999 6676 77889999
Q ss_pred EEecccccccC--------CHHHHHHHHHhhccCCcEEEEEecCc
Q 022305 202 ITNVVSVDYLT--------KPIEVFKEMCQVLKPGGLAIVSFSNR 238 (299)
Q Consensus 202 Vis~~~l~~~~--------d~~~~l~ei~rvLkpGG~lii~~~~~ 238 (299)
|+++....|.. ....+++++.++|||||.+++...+.
T Consensus 115 i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 159 (214)
T 1yzh_A 115 LYLNFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTDNR 159 (214)
T ss_dssp EEEESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEESCH
T ss_pred EEEECCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeCCH
Confidence 99997655443 23689999999999999999987543
No 119
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.43 E-value=1.1e-13 Score=115.04 Aligned_cols=102 Identities=21% Similarity=0.113 Sum_probs=75.8
Q ss_pred HHHHhh-hcCCceeeccCcCCccc--cCCCCCCCeEEEEeCCHHHHHhcCC---------CCcEEEeccCCCCCCCCCCC
Q 022305 130 AIAALT-KYYSEVFPPSNTPGVSH--FPPGYKQDRIVGMGMNEEELKRNPV---------LTEYVVQDLNLNPKLPFEDN 197 (299)
Q Consensus 130 ~~~~l~-~~~~~vLDiGcG~G~~~--~~~~~~~~~v~gvD~S~~ml~~a~~---------~~~~~~~D~~~~~~lpf~~~ 197 (299)
+++.+. ....+|||+|||+|... +....++.+++|+|+|+.|++.+++ ++ ++.+|.. +.++..++
T Consensus 17 ~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~--~~~~~~~~ 93 (178)
T 3hm2_A 17 AISALAPKPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAP--RAFDDVPD 93 (178)
T ss_dssp HHHHHCCCTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTT--GGGGGCCS
T ss_pred HHHHhcccCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchH--hhhhccCC
Confidence 344442 23458999999999633 3444467899999999999998764 24 6667762 23344338
Q ss_pred CeeEEEecccccccCCHHHHHHHHHhhccCCcEEEEEecCc
Q 022305 198 SFDVITNVVSVDYLTKPIEVFKEMCQVLKPGGLAIVSFSNR 238 (299)
Q Consensus 198 ~FD~Vis~~~l~~~~d~~~~l~ei~rvLkpGG~lii~~~~~ 238 (299)
+||+|++..+++| ..+++++.++|||||.+++.....
T Consensus 94 ~~D~i~~~~~~~~----~~~l~~~~~~L~~gG~l~~~~~~~ 130 (178)
T 3hm2_A 94 NPDVIFIGGGLTA----PGVFAAAWKRLPVGGRLVANAVTV 130 (178)
T ss_dssp CCSEEEECC-TTC----TTHHHHHHHTCCTTCEEEEEECSH
T ss_pred CCCEEEECCcccH----HHHHHHHHHhcCCCCEEEEEeecc
Confidence 9999999999988 789999999999999999987654
No 120
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.43 E-value=2.7e-14 Score=124.47 Aligned_cols=107 Identities=9% Similarity=0.080 Sum_probs=81.1
Q ss_pred hhcCCceeeccCcCCccc--cCCCCCCCeEEEEeCCHHHHHhcCC--------CCcEEEeccCCCCCC-C--CCCCCeeE
Q 022305 135 TKYYSEVFPPSNTPGVSH--FPPGYKQDRIVGMGMNEEELKRNPV--------LTEYVVQDLNLNPKL-P--FEDNSFDV 201 (299)
Q Consensus 135 ~~~~~~vLDiGcG~G~~~--~~~~~~~~~v~gvD~S~~ml~~a~~--------~~~~~~~D~~~~~~l-p--f~~~~FD~ 201 (299)
.+....|||+|||+|... ++...++.+|+|+|+|+.|++.+++ +++++.+|+ ..+ + +++++||.
T Consensus 32 ~~~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da---~~~l~~~~~~~~~d~ 108 (218)
T 3dxy_A 32 GREAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDA---VEVLHKMIPDNSLRM 108 (218)
T ss_dssp SSCCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCH---HHHHHHHSCTTCEEE
T ss_pred CCCCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCH---HHHHHHHcCCCChhe
Confidence 334568999999999733 3444567899999999999987653 378888998 553 3 78899999
Q ss_pred EEecccccccCCH--------HHHHHHHHhhccCCcEEEEEecCcchHHHH
Q 022305 202 ITNVVSVDYLTKP--------IEVFKEMCQVLKPGGLAIVSFSNRCFWTKA 244 (299)
Q Consensus 202 Vis~~~l~~~~d~--------~~~l~ei~rvLkpGG~lii~~~~~~~~~~~ 244 (299)
|++++...|.... ..+++++.|+|||||.+++.+.+.......
T Consensus 109 v~~~~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td~~~~~~~~ 159 (218)
T 3dxy_A 109 VQLFFPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATDWEPYAEHM 159 (218)
T ss_dssp EEEESCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEESCHHHHHHH
T ss_pred EEEeCCCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeCCHHHHHHH
Confidence 9998665554322 259999999999999999987765544433
No 121
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.43 E-value=8.1e-14 Score=122.95 Aligned_cols=137 Identities=12% Similarity=0.123 Sum_probs=98.6
Q ss_pred cCCceeeccCcCCcccc--CCC-CCCCeEEEEeCCHHHHHhcCC---------CCcEEEeccCCCCCCCCCCCCeeEEEe
Q 022305 137 YYSEVFPPSNTPGVSHF--PPG-YKQDRIVGMGMNEEELKRNPV---------LTEYVVQDLNLNPKLPFEDNSFDVITN 204 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~~~--~~~-~~~~~v~gvD~S~~ml~~a~~---------~~~~~~~D~~~~~~lpf~~~~FD~Vis 204 (299)
...+|||+|||+|.... ... .+..+++++|+|+.+++.+++ ++++..+|+ .+.++++++||+|++
T Consensus 96 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~---~~~~~~~~~~D~v~~ 172 (258)
T 2pwy_A 96 PGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKL---EEAELEEAAYDGVAL 172 (258)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCG---GGCCCCTTCEEEEEE
T ss_pred CCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECch---hhcCCCCCCcCEEEE
Confidence 45689999999996332 222 246899999999999986643 467888998 666788889999998
Q ss_pred cccccccCCHHHHHHHHHhhccCCcEEEEEecCcchHHHHHHhhhhcCCCchhhhHHHHHHHhCCCCCCeeeecCC----
Q 022305 205 VVSVDYLTKPIEVFKEMCQVLKPGGLAIVSFSNRCFWTKAISIWTSTGDADHVMIVGAYFHYAGGYEPPQAVDISP---- 280 (299)
Q Consensus 205 ~~~l~~~~d~~~~l~ei~rvLkpGG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aGF~~v~~~~~~~---- 280 (299)
+.+++..+++++.++|||||.+++..++.....+ ..+.+ +..||..+++.+...
T Consensus 173 -----~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~----------------~~~~l-~~~gf~~~~~~~~~~~~~~ 230 (258)
T 2pwy_A 173 -----DLMEPWKVLEKAALALKPDRFLVAYLPNITQVLE----------------LVRAA-EAHPFRLERVLEVGWREWE 230 (258)
T ss_dssp -----ESSCGGGGHHHHHHHEEEEEEEEEEESCHHHHHH----------------HHHHH-TTTTEEEEEEEEEEEEEEE
T ss_pred -----CCcCHHHHHHHHHHhCCCCCEEEEEeCCHHHHHH----------------HHHHH-HHCCCceEEEEEeeeeEee
Confidence 4678889999999999999999998765422111 11222 347888777665311
Q ss_pred ---------CCCCCCCeEEEEEEecCC
Q 022305 281 ---------NPGRSDPMYVVYSRKAST 298 (299)
Q Consensus 281 ---------~~~~~~p~~~v~arK~~~ 298 (299)
......+.|++.|||...
T Consensus 231 ~~~~~~rp~~~~~~~~~~l~~ark~~~ 257 (258)
T 2pwy_A 231 VRLPVAHPRFQQVGHTAFLVALRRWKG 257 (258)
T ss_dssp EETTEEEECSSCCCCCCEEEEEEECCC
T ss_pred eccCccCCCCccCCcceEEEEEEecCC
Confidence 112345789999999864
No 122
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.43 E-value=9.5e-14 Score=117.84 Aligned_cols=99 Identities=11% Similarity=0.168 Sum_probs=74.3
Q ss_pred hhcCCceeeccCcCCcccc--CCCC-CCCeEEEEeCCHHHHHhcCC---------CCcEEEeccCCCCCCC-CCCCCeeE
Q 022305 135 TKYYSEVFPPSNTPGVSHF--PPGY-KQDRIVGMGMNEEELKRNPV---------LTEYVVQDLNLNPKLP-FEDNSFDV 201 (299)
Q Consensus 135 ~~~~~~vLDiGcG~G~~~~--~~~~-~~~~v~gvD~S~~ml~~a~~---------~~~~~~~D~~~~~~lp-f~~~~FD~ 201 (299)
.+...+|||+|||+|.... .... +..+++|+|+|+.|++.+++ +++++++|+ ..++ +.+++||+
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~---~~~~~~~~~~fD~ 96 (197)
T 3eey_A 20 VKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGH---QNMDKYIDCPVKA 96 (197)
T ss_dssp CCTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCG---GGGGGTCCSCEEE
T ss_pred CCCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCH---HHHhhhccCCceE
Confidence 3445789999999996322 2221 34699999999999987754 377889998 6665 66789999
Q ss_pred EEeccccc---------ccCCHHHHHHHHHhhccCCcEEEEEec
Q 022305 202 ITNVVSVD---------YLTKPIEVFKEMCQVLKPGGLAIVSFS 236 (299)
Q Consensus 202 Vis~~~l~---------~~~d~~~~l~ei~rvLkpGG~lii~~~ 236 (299)
|++...+. +..+..++++++.++|||||.+++...
T Consensus 97 v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~ 140 (197)
T 3eey_A 97 VMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIY 140 (197)
T ss_dssp EEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred EEEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEc
Confidence 99886541 112456899999999999999888753
No 123
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.43 E-value=7.3e-14 Score=126.89 Aligned_cols=93 Identities=10% Similarity=0.009 Sum_probs=75.8
Q ss_pred hcCCceeeccCcCCc--cccCCCCCCCeEEEEeCCHHHHHhcCC--------CCcEEEeccCCCCCCCCCCCCeeEEEec
Q 022305 136 KYYSEVFPPSNTPGV--SHFPPGYKQDRIVGMGMNEEELKRNPV--------LTEYVVQDLNLNPKLPFEDNSFDVITNV 205 (299)
Q Consensus 136 ~~~~~vLDiGcG~G~--~~~~~~~~~~~v~gvD~S~~ml~~a~~--------~~~~~~~D~~~~~~lpf~~~~FD~Vis~ 205 (299)
+...+|||+|||+|. ..+....++++|+|+|+|++|++.|++ +++++++|+ ..++ +++||+|++.
T Consensus 121 ~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa---~~l~--d~~FDvV~~~ 195 (298)
T 3fpf_A 121 RRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDE---TVID--GLEFDVLMVA 195 (298)
T ss_dssp CTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCG---GGGG--GCCCSEEEEC
T ss_pred CCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECch---hhCC--CCCcCEEEEC
Confidence 345799999999874 222333468999999999999998765 378999998 6665 7899999986
Q ss_pred ccccccCCHHHHHHHHHhhccCCcEEEEEec
Q 022305 206 VSVDYLTKPIEVFKEMCQVLKPGGLAIVSFS 236 (299)
Q Consensus 206 ~~l~~~~d~~~~l~ei~rvLkpGG~lii~~~ 236 (299)
.. .+++.++++++.|+|||||.+++...
T Consensus 196 a~---~~d~~~~l~el~r~LkPGG~Lvv~~~ 223 (298)
T 3fpf_A 196 AL---AEPKRRVFRNIHRYVDTETRIIYRTY 223 (298)
T ss_dssp TT---CSCHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred CC---ccCHHHHHHHHHHHcCCCcEEEEEcC
Confidence 54 58999999999999999999998754
No 124
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.42 E-value=1.2e-13 Score=119.69 Aligned_cols=101 Identities=14% Similarity=0.081 Sum_probs=78.8
Q ss_pred hcCCceeeccCcCCcc--ccCCCCCCCeEEEEeCCHHHHHhcCC--------CCcEEEeccCCCCCCC--CCCCCeeEEE
Q 022305 136 KYYSEVFPPSNTPGVS--HFPPGYKQDRIVGMGMNEEELKRNPV--------LTEYVVQDLNLNPKLP--FEDNSFDVIT 203 (299)
Q Consensus 136 ~~~~~vLDiGcG~G~~--~~~~~~~~~~v~gvD~S~~ml~~a~~--------~~~~~~~D~~~~~~lp--f~~~~FD~Vi 203 (299)
.....|||+|||+|.. .++...++.+++|+|+|+.|++.|++ +++++.+|+ ..++ +++++||.|+
T Consensus 37 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~---~~l~~~~~~~~~d~v~ 113 (213)
T 2fca_A 37 NDNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDA---DTLTDVFEPGEVKRVY 113 (213)
T ss_dssp SCCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCG---GGHHHHCCTTSCCEEE
T ss_pred CCCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCH---HHHHhhcCcCCcCEEE
Confidence 3446899999999973 33344567899999999999987654 378889998 6665 7788999999
Q ss_pred ecccccccCC--------HHHHHHHHHhhccCCcEEEEEecCcc
Q 022305 204 NVVSVDYLTK--------PIEVFKEMCQVLKPGGLAIVSFSNRC 239 (299)
Q Consensus 204 s~~~l~~~~d--------~~~~l~ei~rvLkpGG~lii~~~~~~ 239 (299)
+++...|... ...+++++.++|||||.+++.+.+..
T Consensus 114 ~~~~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td~~~ 157 (213)
T 2fca_A 114 LNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTDNRG 157 (213)
T ss_dssp EESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEESCHH
T ss_pred EECCCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEeCCHH
Confidence 8765544432 36899999999999999999876543
No 125
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.41 E-value=4.7e-14 Score=119.32 Aligned_cols=99 Identities=6% Similarity=-0.034 Sum_probs=79.5
Q ss_pred cCCceeeccCcCCcccc-CCCCCCCeEEEEeCCHHHHHhcCC--------CCcEEEeccCCCCCCC--CCCCCeeEEEec
Q 022305 137 YYSEVFPPSNTPGVSHF-PPGYKQDRIVGMGMNEEELKRNPV--------LTEYVVQDLNLNPKLP--FEDNSFDVITNV 205 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~~~-~~~~~~~~v~gvD~S~~ml~~a~~--------~~~~~~~D~~~~~~lp--f~~~~FD~Vis~ 205 (299)
...+|||+|||+|...+ .......+|+|+|+|+.|++.+++ +++++++|+ .+++ +++++||+|++.
T Consensus 44 ~~~~vLDlgcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~---~~~~~~~~~~~fD~i~~~ 120 (189)
T 3p9n_A 44 TGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNIEALGLSGATLRRGAV---AAVVAAGTTSPVDLVLAD 120 (189)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCSEEEEEECCHHHHHHHHHHHHHHTCSCEEEEESCH---HHHHHHCCSSCCSEEEEC
T ss_pred CCCEEEEeCCCcCHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEEccH---HHHHhhccCCCccEEEEC
Confidence 34689999999997433 223344689999999999997765 367899998 5543 457899999999
Q ss_pred cccccc-CCHHHHHHHHHh--hccCCcEEEEEecCc
Q 022305 206 VSVDYL-TKPIEVFKEMCQ--VLKPGGLAIVSFSNR 238 (299)
Q Consensus 206 ~~l~~~-~d~~~~l~ei~r--vLkpGG~lii~~~~~ 238 (299)
..+++. ++..++++++.+ +|||||.++++.+..
T Consensus 121 ~p~~~~~~~~~~~l~~~~~~~~L~pgG~l~~~~~~~ 156 (189)
T 3p9n_A 121 PPYNVDSADVDAILAALGTNGWTREGTVAVVERATT 156 (189)
T ss_dssp CCTTSCHHHHHHHHHHHHHSSSCCTTCEEEEEEETT
T ss_pred CCCCcchhhHHHHHHHHHhcCccCCCeEEEEEecCC
Confidence 887775 688999999999 999999999987653
No 126
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.41 E-value=6.9e-13 Score=123.05 Aligned_cols=144 Identities=13% Similarity=0.035 Sum_probs=94.1
Q ss_pred CCceeeccCcCCc--cccCCCCCCCeEEEEeCCHHHHHhcC-------CCCcEEEeccCCCCCCCCCCCCeeEEEecccc
Q 022305 138 YSEVFPPSNTPGV--SHFPPGYKQDRIVGMGMNEEELKRNP-------VLTEYVVQDLNLNPKLPFEDNSFDVITNVVSV 208 (299)
Q Consensus 138 ~~~vLDiGcG~G~--~~~~~~~~~~~v~gvD~S~~ml~~a~-------~~~~~~~~D~~~~~~lpf~~~~FD~Vis~~~l 208 (299)
..+|||+|||+|. ..+....++.+++++|++ .++..++ .+++++.+|+ . .+++ +||+|++.+++
T Consensus 185 ~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~~~~~~~~~~~~v~~~~~d~---~-~~~p--~~D~v~~~~vl 257 (348)
T 3lst_A 185 TGTVADVGGGRGGFLLTVLREHPGLQGVLLDRA-EVVARHRLDAPDVAGRWKVVEGDF---L-REVP--HADVHVLKRIL 257 (348)
T ss_dssp SEEEEEETCTTSHHHHHHHHHCTTEEEEEEECH-HHHTTCCCCCGGGTTSEEEEECCT---T-TCCC--CCSEEEEESCG
T ss_pred CceEEEECCccCHHHHHHHHHCCCCEEEEecCH-HHhhcccccccCCCCCeEEEecCC---C-CCCC--CCcEEEEehhc
Confidence 4689999999996 334445567899999995 4554322 1378999998 3 3444 89999999999
Q ss_pred cccCCH--HHHHHHHHhhccCCcEEEEEecCc-----chHHHHHHh--hhhcCC-CchhhhHHHHHHHhCCCCCCeeeec
Q 022305 209 DYLTKP--IEVFKEMCQVLKPGGLAIVSFSNR-----CFWTKAISI--WTSTGD-ADHVMIVGAYFHYAGGYEPPQAVDI 278 (299)
Q Consensus 209 ~~~~d~--~~~l~ei~rvLkpGG~lii~~~~~-----~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~aGF~~v~~~~~ 278 (299)
||++|. .++|++++++|||||.++|..... ......... +...+. .....-+.+.+ +++||+.+++...
T Consensus 258 h~~~d~~~~~~L~~~~~~LkpgG~l~i~e~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll-~~aGf~~~~~~~~ 336 (348)
T 3lst_A 258 HNWGDEDSVRILTNCRRVMPAHGRVLVIDAVVPEGNDAHQSKEMDFMMLAARTGQERTAAELEPLF-TAAGLRLDRVVGT 336 (348)
T ss_dssp GGSCHHHHHHHHHHHHHTCCTTCEEEEEECCBCSSSSCCHHHHHHHHHHHTTSCCCCBHHHHHHHH-HHTTEEEEEEEEC
T ss_pred cCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhhhcChhhhhcCCCcCCCHHHHHHHH-HHCCCceEEEEEC
Confidence 999988 699999999999999888764321 111112111 111221 11222333344 5699999888761
Q ss_pred CCCCCCCCCeEEEEEEe
Q 022305 279 SPNPGRSDPMYVVYSRK 295 (299)
Q Consensus 279 ~~~~~~~~p~~~v~arK 295 (299)
.....++.+++
T Consensus 337 ------~~~~~vie~~p 347 (348)
T 3lst_A 337 ------SSVMSIAVGVP 347 (348)
T ss_dssp ------SSSCEEEEEEE
T ss_pred ------CCCcEEEEEEe
Confidence 12345555554
No 127
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.41 E-value=2.2e-13 Score=120.07 Aligned_cols=102 Identities=15% Similarity=0.135 Sum_probs=76.2
Q ss_pred CCceeeccCcCCc--cccCCCCCCCeEEEEeCCHHHHHhcC--------------CCCcEEEeccCCCCC-CC--CCCCC
Q 022305 138 YSEVFPPSNTPGV--SHFPPGYKQDRIVGMGMNEEELKRNP--------------VLTEYVVQDLNLNPK-LP--FEDNS 198 (299)
Q Consensus 138 ~~~vLDiGcG~G~--~~~~~~~~~~~v~gvD~S~~ml~~a~--------------~~~~~~~~D~~~~~~-lp--f~~~~ 198 (299)
..+|||+|||+|. ..++...++.+++|+|+|+.|++.|+ .+++++.+|+ .. ++ +++++
T Consensus 47 ~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~---~~~l~~~~~~~~ 123 (235)
T 3ckk_A 47 QVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNA---MKHLPNFFYKGQ 123 (235)
T ss_dssp CEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCT---TTCHHHHCCTTC
T ss_pred CCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcH---HHhhhhhCCCcC
Confidence 4579999999996 33344556789999999999997543 2478999998 55 66 78899
Q ss_pred eeEEEecccccccCC--------HHHHHHHHHhhccCCcEEEEEecCcchHH
Q 022305 199 FDVITNVVSVDYLTK--------PIEVFKEMCQVLKPGGLAIVSFSNRCFWT 242 (299)
Q Consensus 199 FD~Vis~~~l~~~~d--------~~~~l~ei~rvLkpGG~lii~~~~~~~~~ 242 (299)
||.|++.+.-.|... ...+++++.++|||||.|++.+.+.....
T Consensus 124 ~D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td~~~~~~ 175 (235)
T 3ckk_A 124 LTKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTITDVLELHD 175 (235)
T ss_dssp EEEEEEESCC-----------CCCHHHHHHHHHHEEEEEEEEEEESCHHHHH
T ss_pred eeEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeCCHHHHH
Confidence 999987654444321 14799999999999999999877654333
No 128
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.41 E-value=4.8e-13 Score=116.18 Aligned_cols=101 Identities=12% Similarity=0.118 Sum_probs=75.9
Q ss_pred hhhcCCceeeccCc-CCccccCCCCC-CCeEEEEeCCHHHHHhcCC-------CCcEEEeccCCCCCC-CCCCCCeeEEE
Q 022305 134 LTKYYSEVFPPSNT-PGVSHFPPGYK-QDRIVGMGMNEEELKRNPV-------LTEYVVQDLNLNPKL-PFEDNSFDVIT 203 (299)
Q Consensus 134 l~~~~~~vLDiGcG-~G~~~~~~~~~-~~~v~gvD~S~~ml~~a~~-------~~~~~~~D~~~~~~l-pf~~~~FD~Vi 203 (299)
+.+...+|||+||| +|...+..... +.+|+|+|+|+.|++.+++ +++++++|+ ..+ ++++++||+|+
T Consensus 52 ~~~~~~~vLDlG~G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~---~~~~~~~~~~fD~I~ 128 (230)
T 3evz_A 52 FLRGGEVALEIGTGHTAMMALMAEKFFNCKVTATEVDEEFFEYARRNIERNNSNVRLVKSNG---GIIKGVVEGTFDVIF 128 (230)
T ss_dssp TCCSSCEEEEECCTTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHTTCCCEEEECSS---CSSTTTCCSCEEEEE
T ss_pred hcCCCCEEEEcCCCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCc---hhhhhcccCceeEEE
Confidence 34455789999999 99743332222 6899999999999997765 378999997 333 45678999999
Q ss_pred ecccccccCC-------------------HHHHHHHHHhhccCCcEEEEEecC
Q 022305 204 NVVSVDYLTK-------------------PIEVFKEMCQVLKPGGLAIVSFSN 237 (299)
Q Consensus 204 s~~~l~~~~d-------------------~~~~l~ei~rvLkpGG~lii~~~~ 237 (299)
++-.+++..+ ...+++++.++|||||.+++.++.
T Consensus 129 ~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 181 (230)
T 3evz_A 129 SAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPD 181 (230)
T ss_dssp ECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEES
T ss_pred ECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEecc
Confidence 9866555433 478999999999999999987664
No 129
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.41 E-value=1.5e-13 Score=114.28 Aligned_cols=93 Identities=3% Similarity=-0.108 Sum_probs=75.1
Q ss_pred cCCceeeccCcCCccccCCCCCCCeEEEEeCCHHHHHhcCC--------CCcEEEeccCCCCCCCCCCCCeeEEEecccc
Q 022305 137 YYSEVFPPSNTPGVSHFPPGYKQDRIVGMGMNEEELKRNPV--------LTEYVVQDLNLNPKLPFEDNSFDVITNVVSV 208 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~~~~~~~~~~~v~gvD~S~~ml~~a~~--------~~~~~~~D~~~~~~lpf~~~~FD~Vis~~~l 208 (299)
...+|||+|||+|........+..+++|+|+|+.|++.+++ +++++.+|+ .. ++++++||+|++..+
T Consensus 35 ~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~---~~-~~~~~~~D~i~~~~~- 109 (183)
T 2yxd_A 35 KDDVVVDVGCGSGGMTVEIAKRCKFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRA---ED-VLDKLEFNKAFIGGT- 109 (183)
T ss_dssp TTCEEEEESCCCSHHHHHHHTTSSEEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCH---HH-HGGGCCCSEEEECSC-
T ss_pred CCCEEEEeCCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCc---cc-cccCCCCcEEEECCc-
Confidence 34689999999997333332367899999999999987664 367888888 44 666789999999987
Q ss_pred cccCCHHHHHHHHHhhccCCcEEEEEecCcc
Q 022305 209 DYLTKPIEVFKEMCQVLKPGGLAIVSFSNRC 239 (299)
Q Consensus 209 ~~~~d~~~~l~ei~rvLkpGG~lii~~~~~~ 239 (299)
.++..+++++.++ |||.+++..++..
T Consensus 110 ---~~~~~~l~~~~~~--~gG~l~~~~~~~~ 135 (183)
T 2yxd_A 110 ---KNIEKIIEILDKK--KINHIVANTIVLE 135 (183)
T ss_dssp ---SCHHHHHHHHHHT--TCCEEEEEESCHH
T ss_pred ---ccHHHHHHHHhhC--CCCEEEEEecccc
Confidence 7889999999999 9999999876543
No 130
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.41 E-value=2.3e-13 Score=128.28 Aligned_cols=103 Identities=15% Similarity=0.150 Sum_probs=83.6
Q ss_pred CCceeeccCcCCccccCCCCCCCeEEEEeCCHHHHHhcCCC-------CcEEEeccCCCCCCCCCCCCeeEEEecccccc
Q 022305 138 YSEVFPPSNTPGVSHFPPGYKQDRIVGMGMNEEELKRNPVL-------TEYVVQDLNLNPKLPFEDNSFDVITNVVSVDY 210 (299)
Q Consensus 138 ~~~vLDiGcG~G~~~~~~~~~~~~v~gvD~S~~ml~~a~~~-------~~~~~~D~~~~~~lpf~~~~FD~Vis~~~l~~ 210 (299)
..+|||+|||+|.........+.+|+|+|+|+.|++.++++ ++++.+|+ ...+.++++||+|+++..+++
T Consensus 234 ~~~VLDlGcG~G~~~~~la~~g~~V~gvDis~~al~~A~~n~~~~~~~v~~~~~D~---~~~~~~~~~fD~Ii~npp~~~ 310 (381)
T 3dmg_A 234 GRQVLDLGAGYGALTLPLARMGAEVVGVEDDLASVLSLQKGLEANALKAQALHSDV---DEALTEEARFDIIVTNPPFHV 310 (381)
T ss_dssp TCEEEEETCTTSTTHHHHHHTTCEEEEEESBHHHHHHHHHHHHHTTCCCEEEECST---TTTSCTTCCEEEEEECCCCCT
T ss_pred CCEEEEEeeeCCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHcCCCeEEEEcch---hhccccCCCeEEEEECCchhh
Confidence 45899999999975443333467999999999999987653 78999999 777777789999999999888
Q ss_pred -----cCCHHHHHHHHHhhccCCcEEEEEecCcchHHH
Q 022305 211 -----LTKPIEVFKEMCQVLKPGGLAIVSFSNRCFWTK 243 (299)
Q Consensus 211 -----~~d~~~~l~ei~rvLkpGG~lii~~~~~~~~~~ 243 (299)
..+...+++++.++|||||.+++.......+..
T Consensus 311 ~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~n~~l~~~~ 348 (381)
T 3dmg_A 311 GGAVILDVAQAFVNVAAARLRPGGVFFLVSNPFLKYEP 348 (381)
T ss_dssp TCSSCCHHHHHHHHHHHHHEEEEEEEEEEECTTSCHHH
T ss_pred cccccHHHHHHHHHHHHHhcCcCcEEEEEEcCCCChHH
Confidence 456789999999999999999998765443333
No 131
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.40 E-value=2.3e-13 Score=111.97 Aligned_cols=96 Identities=17% Similarity=0.135 Sum_probs=77.3
Q ss_pred cCCceeeccCcCCcccc--CCC-CCCCeEEEEeCCHHHHHhcCCCCcEEEeccCCCCCCC--------CCCCCeeEEEec
Q 022305 137 YYSEVFPPSNTPGVSHF--PPG-YKQDRIVGMGMNEEELKRNPVLTEYVVQDLNLNPKLP--------FEDNSFDVITNV 205 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~~~--~~~-~~~~~v~gvD~S~~ml~~a~~~~~~~~~D~~~~~~lp--------f~~~~FD~Vis~ 205 (299)
...+|||+|||+|.... ... .++.+++|+|+|+ |++. .+++++.+|+ ...+ +++++||+|++.
T Consensus 22 ~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~--~~~~~~~~d~---~~~~~~~~~~~~~~~~~~D~i~~~ 95 (180)
T 1ej0_A 22 PGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI--VGVDFLQGDF---RDELVMKALLERVGDSKVQVVMSD 95 (180)
T ss_dssp TTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC--TTEEEEESCT---TSHHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc--CcEEEEEccc---ccchhhhhhhccCCCCceeEEEEC
Confidence 44689999999996222 222 1357999999999 7765 4588899998 6766 778899999999
Q ss_pred ccccccCCH-----------HHHHHHHHhhccCCcEEEEEecCc
Q 022305 206 VSVDYLTKP-----------IEVFKEMCQVLKPGGLAIVSFSNR 238 (299)
Q Consensus 206 ~~l~~~~d~-----------~~~l~ei~rvLkpGG~lii~~~~~ 238 (299)
..+++..+. ..+++++.++|||||.+++.....
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 139 (180)
T 1ej0_A 96 MAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQG 139 (180)
T ss_dssp CCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESS
T ss_pred CCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecC
Confidence 999888776 789999999999999999876654
No 132
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.40 E-value=2e-13 Score=120.61 Aligned_cols=135 Identities=14% Similarity=0.152 Sum_probs=97.6
Q ss_pred cCCceeeccCcCCcccc--CCC-CCCCeEEEEeCCHHHHHhcCCC---------CcEEEeccCCCCCCCCCCCCeeEEEe
Q 022305 137 YYSEVFPPSNTPGVSHF--PPG-YKQDRIVGMGMNEEELKRNPVL---------TEYVVQDLNLNPKLPFEDNSFDVITN 204 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~~~--~~~-~~~~~v~gvD~S~~ml~~a~~~---------~~~~~~D~~~~~~lpf~~~~FD~Vis 204 (299)
...+|||+|||+|.... ... .+..+++|+|+|+.+++.|+++ ++++.+|+ .+ ++++++||+|++
T Consensus 93 ~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~---~~-~~~~~~~D~v~~ 168 (255)
T 3mb5_A 93 PGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDI---YE-GIEEENVDHVIL 168 (255)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCG---GG-CCCCCSEEEEEE
T ss_pred CCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECch---hh-ccCCCCcCEEEE
Confidence 45689999999996332 222 3478999999999999877652 67888888 43 367788999998
Q ss_pred cccccccCCHHHHHHHHHhhccCCcEEEEEecCcchHHHHHHhhhhcCCCchhhhHHHHHHHhCC--CCCCeeeecCCCC
Q 022305 205 VVSVDYLTKPIEVFKEMCQVLKPGGLAIVSFSNRCFWTKAISIWTSTGDADHVMIVGAYFHYAGG--YEPPQAVDISPNP 282 (299)
Q Consensus 205 ~~~l~~~~d~~~~l~ei~rvLkpGG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aG--F~~v~~~~~~~~~ 282 (299)
+.+++..+++++.++|||||.+++..+...... ...+.+ +..| |..+++.++....
T Consensus 169 -----~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~----------------~~~~~l-~~~g~~f~~~~~~e~~~r~ 226 (255)
T 3mb5_A 169 -----DLPQPERVVEHAAKALKPGGFFVAYTPCSNQVM----------------RLHEKL-REFKDYFMKPRTINVLVFD 226 (255)
T ss_dssp -----CSSCGGGGHHHHHHHEEEEEEEEEEESSHHHHH----------------HHHHHH-HHTGGGBSCCEEECCCCCC
T ss_pred -----CCCCHHHHHHHHHHHcCCCCEEEEEECCHHHHH----------------HHHHHH-HHcCCCccccEEEEEeeee
Confidence 467888999999999999999998765432111 122223 3477 9888887774431
Q ss_pred -------------CCCCCeEEEEEEecC
Q 022305 283 -------------GRSDPMYVVYSRKAS 297 (299)
Q Consensus 283 -------------~~~~p~~~v~arK~~ 297 (299)
.....-|+++|||.-
T Consensus 227 ~~~~~~~~rp~~~~~~htg~l~~ark~~ 254 (255)
T 3mb5_A 227 QEVKKECMRPRTTALVHTGYITFARRIL 254 (255)
T ss_dssp EEEETTEEEECSCCCCCSCEEEEEEBCC
T ss_pred eEecCCccCCCcccccccEEEEEEEEec
Confidence 123456999999963
No 133
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.38 E-value=1.9e-13 Score=121.39 Aligned_cols=137 Identities=10% Similarity=0.016 Sum_probs=96.3
Q ss_pred CCceeeccCcCCcccc--CCCCCCCeEEEEeCCHHHHHhcCC--------CCcEEEeccCCCCCCCCC---CCCeeEEEe
Q 022305 138 YSEVFPPSNTPGVSHF--PPGYKQDRIVGMGMNEEELKRNPV--------LTEYVVQDLNLNPKLPFE---DNSFDVITN 204 (299)
Q Consensus 138 ~~~vLDiGcG~G~~~~--~~~~~~~~v~gvD~S~~ml~~a~~--------~~~~~~~D~~~~~~lpf~---~~~FD~Vis 204 (299)
..+|||+|||+|...+ ....++.+|+|+|+|+.|++.+++ +++++++|+ ++++.. +++||+|+|
T Consensus 81 ~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~---~~~~~~~~~~~~fD~I~s 157 (249)
T 3g89_A 81 PLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLKGARALWGRA---EVLAREAGHREAYARAVA 157 (249)
T ss_dssp SCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEECCH---HHHTTSTTTTTCEEEEEE
T ss_pred CCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEECcH---HHhhcccccCCCceEEEE
Confidence 4689999999997433 333467899999999999987764 378899998 666643 478999999
Q ss_pred cccccccCCHHHHHHHHHhhccCCcEEEEEecCcchHHHHHHhhhhcCCCchhhhHHHHHHHhCCCCCCeeeecCCCCCC
Q 022305 205 VVSVDYLTKPIEVFKEMCQVLKPGGLAIVSFSNRCFWTKAISIWTSTGDADHVMIVGAYFHYAGGYEPPQAVDISPNPGR 284 (299)
Q Consensus 205 ~~~l~~~~d~~~~l~ei~rvLkpGG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aGF~~v~~~~~~~~~~~ 284 (299)
.. +.+...+++++.++|||||.+++...... ..+ +.-....+ ...||...++..+.. |+.
T Consensus 158 ~a----~~~~~~ll~~~~~~LkpgG~l~~~~g~~~-~~e-------------~~~~~~~l-~~~G~~~~~~~~~~~-p~~ 217 (249)
T 3g89_A 158 RA----VAPLCVLSELLLPFLEVGGAAVAMKGPRV-EEE-------------LAPLPPAL-ERLGGRLGEVLALQL-PLS 217 (249)
T ss_dssp ES----SCCHHHHHHHHGGGEEEEEEEEEEECSCC-HHH-------------HTTHHHHH-HHHTEEEEEEEEEEC-TTT
T ss_pred CC----cCCHHHHHHHHHHHcCCCeEEEEEeCCCc-HHH-------------HHHHHHHH-HHcCCeEEEEEEeeC-CCC
Confidence 75 35778999999999999998887543211 111 11222223 336898888877733 334
Q ss_pred CCCeEEEEEEecC
Q 022305 285 SDPMYVVYSRKAS 297 (299)
Q Consensus 285 ~~p~~~v~arK~~ 297 (299)
....++++.+|.+
T Consensus 218 ~~~R~l~~~~k~~ 230 (249)
T 3g89_A 218 GEARHLVVLEKTA 230 (249)
T ss_dssp CCEEEEEEEEECS
T ss_pred CCcEEEEEEEeCC
Confidence 4566777777753
No 134
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.38 E-value=2.6e-14 Score=125.85 Aligned_cols=154 Identities=12% Similarity=0.064 Sum_probs=82.7
Q ss_pred CceeeccCcCCccccCCCCCC-CeEEEEeCCHHHHHhcCCC-CcEEEe---ccCCCCCCCCCCCCeeEEEecccccccCC
Q 022305 139 SEVFPPSNTPGVSHFPPGYKQ-DRIVGMGMNEEELKRNPVL-TEYVVQ---DLNLNPKLPFEDNSFDVITNVVSVDYLTK 213 (299)
Q Consensus 139 ~~vLDiGcG~G~~~~~~~~~~-~~v~gvD~S~~ml~~a~~~-~~~~~~---D~~~~~~lpf~~~~FD~Vis~~~l~~~~d 213 (299)
.+|||+|||+|.........+ .+|+|+|+|++|++.+.++ ...... ++.....-.++...||.+.+..++.++
T Consensus 39 ~~VLDiGcGtG~~t~~la~~g~~~V~gvDis~~ml~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~D~v~~~l-- 116 (232)
T 3opn_A 39 KTCLDIGSSTGGFTDVMLQNGAKLVYALDVGTNQLAWKIRSDERVVVMEQFNFRNAVLADFEQGRPSFTSIDVSFISL-- 116 (232)
T ss_dssp CEEEEETCTTSHHHHHHHHTTCSEEEEECSSCCCCCHHHHTCTTEEEECSCCGGGCCGGGCCSCCCSEEEECCSSSCG--
T ss_pred CEEEEEccCCCHHHHHHHhcCCCEEEEEcCCHHHHHHHHHhCccccccccceEEEeCHhHcCcCCCCEEEEEEEhhhH--
Confidence 489999999996332222224 5999999999999876543 222211 110000000111123444433333333
Q ss_pred HHHHHHHHHhhccCCcEEEEEecCcchHHHHHHhhhhcC---CC-chhhhHHHHHH--HhCCCCCCeeeecCCCCCCCCC
Q 022305 214 PIEVFKEMCQVLKPGGLAIVSFSNRCFWTKAISIWTSTG---DA-DHVMIVGAYFH--YAGGYEPPQAVDISPNPGRSDP 287 (299)
Q Consensus 214 ~~~~l~ei~rvLkpGG~lii~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~--~~aGF~~v~~~~~~~~~~~~~p 287 (299)
..+|++++|+|||||.+++.+ .+. +..........+ +. .|.....++.. .++||+.+.+...+...+..+.
T Consensus 117 -~~~l~~i~rvLkpgG~lv~~~-~p~-~e~~~~~~~~~G~~~d~~~~~~~~~~l~~~l~~aGf~v~~~~~~pi~g~~gn~ 193 (232)
T 3opn_A 117 -DLILPPLYEILEKNGEVAALI-KPQ-FEAGREQVGKNGIIRDPKVHQMTIEKVLKTATQLGFSVKGLTFSPIKGGAGNV 193 (232)
T ss_dssp -GGTHHHHHHHSCTTCEEEEEE-CHH-HHSCHHHHC-CCCCCCHHHHHHHHHHHHHHHHHHTEEEEEEEECSSCBTTTBC
T ss_pred -HHHHHHHHHhccCCCEEEEEE-Ccc-cccCHHHhCcCCeecCcchhHHHHHHHHHHHHHCCCEEEEEEEccCCCCCCCH
Confidence 789999999999999988865 221 111111111111 11 11112222222 6689997766554433344566
Q ss_pred eEEEEEEecC
Q 022305 288 MYVVYSRKAS 297 (299)
Q Consensus 288 ~~~v~arK~~ 297 (299)
-|++.++|.+
T Consensus 194 e~l~~~~~~~ 203 (232)
T 3opn_A 194 EFLVHLLKDG 203 (232)
T ss_dssp CEEEEEEESS
T ss_pred HHHHHHhhcc
Confidence 7888888854
No 135
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.38 E-value=1.2e-12 Score=115.22 Aligned_cols=157 Identities=12% Similarity=0.092 Sum_probs=97.0
Q ss_pred hccccHHHHHHhh----hcCCceeeccCcCCc--cccCCC-CCCCeEEEEeCCHHHHH----hc--CCCCcEEEeccCCC
Q 022305 123 VTHIDDPAIAALT----KYYSEVFPPSNTPGV--SHFPPG-YKQDRIVGMGMNEEELK----RN--PVLTEYVVQDLNLN 189 (299)
Q Consensus 123 ~~~l~~~~~~~l~----~~~~~vLDiGcG~G~--~~~~~~-~~~~~v~gvD~S~~ml~----~a--~~~~~~~~~D~~~~ 189 (299)
...+...++..+. +...+|||+|||+|. .+++.. .+.++|+|+|+|+.|++ .+ +.++.++++|+
T Consensus 58 ~skla~~ll~~l~~~~l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r~nv~~i~~Da--- 134 (232)
T 3id6_C 58 RSKLAGAILKGLKTNPIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRRPNIFPLLADA--- 134 (232)
T ss_dssp TCHHHHHHHTTCSCCSCCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHCTTEEEEECCT---
T ss_pred HHHHHHHHHhhhhhcCCCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhcCCeEEEEccc---
Confidence 3344444444442 244689999999996 222222 24679999999998853 33 24588899998
Q ss_pred CCCC---CCCCCeeEEEecccccccCCHHHHH-HHHHhhccCCcEEEEEecCcchHHHHHHhhhhcCCCchhhhHHHHHH
Q 022305 190 PKLP---FEDNSFDVITNVVSVDYLTKPIEVF-KEMCQVLKPGGLAIVSFSNRCFWTKAISIWTSTGDADHVMIVGAYFH 265 (299)
Q Consensus 190 ~~lp---f~~~~FD~Vis~~~l~~~~d~~~~l-~ei~rvLkpGG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (299)
.... ...++||+|++..+. ++..+.+ ..+.++|||||.+++++...+. .++. ...+...-....+
T Consensus 135 ~~~~~~~~~~~~~D~I~~d~a~---~~~~~il~~~~~~~LkpGG~lvisik~~~~------d~t~-~~~e~~~~~~~~L- 203 (232)
T 3id6_C 135 RFPQSYKSVVENVDVLYVDIAQ---PDQTDIAIYNAKFFLKVNGDMLLVIKARSI------DVTK-DPKEIYKTEVEKL- 203 (232)
T ss_dssp TCGGGTTTTCCCEEEEEECCCC---TTHHHHHHHHHHHHEEEEEEEEEEEC-------------C-CSSSSTTHHHHHH-
T ss_pred ccchhhhccccceEEEEecCCC---hhHHHHHHHHHHHhCCCCeEEEEEEccCCc------ccCC-CHHHHHHHHHHHH-
Confidence 4332 224689999998654 5655555 5566699999999998654331 1111 1111112223333
Q ss_pred HhCCCCCCeeeecCCCCCCCCCeEEEEEEec
Q 022305 266 YAGGYEPPQAVDISPNPGRSDPMYVVYSRKA 296 (299)
Q Consensus 266 ~~aGF~~v~~~~~~~~~~~~~p~~~v~arK~ 296 (299)
+++||++.+..++.|- ....+.|+++|.
T Consensus 204 ~~~gf~~~~~~~l~p~---~~~h~~v~~~~~ 231 (232)
T 3id6_C 204 ENSNFETIQIINLDPY---DKDHAIVLSKYK 231 (232)
T ss_dssp HHTTEEEEEEEECTTT---CSSCEEEEEEEC
T ss_pred HHCCCEEEEEeccCCC---cCceEEEEEEeC
Confidence 4578999998887642 346788888885
No 136
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.37 E-value=1.2e-12 Score=121.87 Aligned_cols=147 Identities=14% Similarity=0.145 Sum_probs=102.2
Q ss_pred cCCceeeccCcCCc--cccCCCCCCCeEEEEeCCHHHHHhcCC--------CCcEEEeccCCCCCCCCCCCCeeEEEecc
Q 022305 137 YYSEVFPPSNTPGV--SHFPPGYKQDRIVGMGMNEEELKRNPV--------LTEYVVQDLNLNPKLPFEDNSFDVITNVV 206 (299)
Q Consensus 137 ~~~~vLDiGcG~G~--~~~~~~~~~~~v~gvD~S~~ml~~a~~--------~~~~~~~D~~~~~~lpf~~~~FD~Vis~~ 206 (299)
...+|+|+|||.|. ..+...+|+.+++..|. |.+++.+++ +++++.+|+ .+.|.+ .+|+|++.+
T Consensus 179 ~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~~~~~~~rv~~~~gD~---~~~~~~--~~D~~~~~~ 252 (353)
T 4a6d_A 179 VFPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQHFSFQEEEQIDFQEGDF---FKDPLP--EADLYILAR 252 (353)
T ss_dssp GCSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHSCC--CCSEEEEESCT---TTSCCC--CCSEEEEES
T ss_pred cCCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHHhhhhcccCceeeecCcc---ccCCCC--CceEEEeee
Confidence 45689999999996 45566778889999998 788886653 488999998 554543 479999999
Q ss_pred cccccCCH--HHHHHHHHhhccCCcEEEEEec---C--c-chHHHHH--HhhhhcCCCch-hhhHHHHHHHhCCCCCCee
Q 022305 207 SVDYLTKP--IEVFKEMCQVLKPGGLAIVSFS---N--R-CFWTKAI--SIWTSTGDADH-VMIVGAYFHYAGGYEPPQA 275 (299)
Q Consensus 207 ~l~~~~d~--~~~l~ei~rvLkpGG~lii~~~---~--~-~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~~aGF~~v~~ 275 (299)
+||+++|. .++|++++++|||||.++|... . . ......+ ..+...++.++ ..-+.+.+ +++||+.+++
T Consensus 253 vlh~~~d~~~~~iL~~~~~al~pgg~lli~e~~~~~~~~~~~~~~~~dl~ml~~~~g~ert~~e~~~ll-~~AGf~~v~v 331 (353)
T 4a6d_A 253 VLHDWADGKCSHLLERIYHTCKPGGGILVIESLLDEDRRGPLLTQLYSLNMLVQTEGQERTPTHYHMLL-SSAGFRDFQF 331 (353)
T ss_dssp SGGGSCHHHHHHHHHHHHHHCCTTCEEEEEECCCCTTSCCCHHHHHHHHHHHHSSSCCCCCHHHHHHHH-HHHTCEEEEE
T ss_pred ecccCCHHHHHHHHHHHHhhCCCCCEEEEEEeeeCCCCCCCHHHHHHHHHHHHhCCCcCCCHHHHHHHH-HHCCCceEEE
Confidence 99999876 5789999999999997766432 1 1 1122222 22222333222 22334444 5699999988
Q ss_pred eecCCCCCCCCCeEEEEEEec
Q 022305 276 VDISPNPGRSDPMYVVYSRKA 296 (299)
Q Consensus 276 ~~~~~~~~~~~p~~~v~arK~ 296 (299)
.... .++.+|+|||-
T Consensus 332 ~~~~------~~~~~i~ArKg 346 (353)
T 4a6d_A 332 KKTG------AIYDAILARKG 346 (353)
T ss_dssp ECCS------SSCEEEEEECC
T ss_pred EEcC------CceEEEEEEec
Confidence 6542 46788999994
No 137
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.37 E-value=3.2e-13 Score=120.85 Aligned_cols=137 Identities=15% Similarity=0.195 Sum_probs=97.5
Q ss_pred cCCceeeccCcCCcccc--CCC-CCCCeEEEEeCCHHHHHhcCC-----------CCcEEEeccCCCCCCCCCCCCeeEE
Q 022305 137 YYSEVFPPSNTPGVSHF--PPG-YKQDRIVGMGMNEEELKRNPV-----------LTEYVVQDLNLNPKLPFEDNSFDVI 202 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~~~--~~~-~~~~~v~gvD~S~~ml~~a~~-----------~~~~~~~D~~~~~~lpf~~~~FD~V 202 (299)
...+|||+|||+|.... ... .+..+++++|+|+.+++.+++ +++++.+|+ ...++++++||+|
T Consensus 99 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~---~~~~~~~~~~D~v 175 (280)
T 1i9g_A 99 PGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDL---ADSELPDGSVDRA 175 (280)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCG---GGCCCCTTCEEEE
T ss_pred CCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECch---HhcCCCCCceeEE
Confidence 44689999999996332 221 246899999999999876542 467888898 6777778899999
Q ss_pred EecccccccCCHHHHHHHHHhhccCCcEEEEEecCcchHHHHHHhhhhcCCCchhhhHHHHHHHhCCCCCCeeeecCCCC
Q 022305 203 TNVVSVDYLTKPIEVFKEMCQVLKPGGLAIVSFSNRCFWTKAISIWTSTGDADHVMIVGAYFHYAGGYEPPQAVDISPNP 282 (299)
Q Consensus 203 is~~~l~~~~d~~~~l~ei~rvLkpGG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aGF~~v~~~~~~~~~ 282 (299)
++ +++++..+++++.++|||||.+++..++.....+. ...+....||..+++.+.....
T Consensus 176 ~~-----~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~----------------~~~l~~~~~f~~~~~~~~~~~~ 234 (280)
T 1i9g_A 176 VL-----DMLAPWEVLDAVSRLLVAGGVLMVYVATVTQLSRI----------------VEALRAKQCWTEPRAWETLQRG 234 (280)
T ss_dssp EE-----ESSCGGGGHHHHHHHEEEEEEEEEEESSHHHHHHH----------------HHHHHHHSSBCCCEEECCCCCC
T ss_pred EE-----CCcCHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHH----------------HHHHHhcCCcCCcEEEEEeeeE
Confidence 98 45688899999999999999999987754322221 1222233678777766653321
Q ss_pred -------------CCCCCeEEEEEEecC
Q 022305 283 -------------GRSDPMYVVYSRKAS 297 (299)
Q Consensus 283 -------------~~~~p~~~v~arK~~ 297 (299)
....+.|++.+||..
T Consensus 235 ~~~~~~~~~p~~~~~~~~~~lv~~rk~~ 262 (280)
T 1i9g_A 235 WNVVGLAVRPQHSMRGHTAFLVATRRLA 262 (280)
T ss_dssp EEEETTEEEECSCCCCCSCEEEEEEBCC
T ss_pred eEeccceeCCCCcccCccEEEEEEEecC
Confidence 123566999999975
No 138
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.36 E-value=1.6e-12 Score=116.69 Aligned_cols=132 Identities=12% Similarity=0.152 Sum_probs=90.3
Q ss_pred cCCceeeccCcCCcccc--CCCCCCCeEEEEeCCHHHHHhcCC--------CCcEEEeccCCCCCCCCCCCCeeEEEec-
Q 022305 137 YYSEVFPPSNTPGVSHF--PPGYKQDRIVGMGMNEEELKRNPV--------LTEYVVQDLNLNPKLPFEDNSFDVITNV- 205 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~~~--~~~~~~~~v~gvD~S~~ml~~a~~--------~~~~~~~D~~~~~~lpf~~~~FD~Vis~- 205 (299)
...+|||+|||+|.... ....++.+++|+|+|+.|++.+++ +++++++|+ .. ++++++||+|+++
T Consensus 109 ~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~---~~-~~~~~~fD~Iv~np 184 (276)
T 2b3t_A 109 QPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDW---FS-ALAGQQFAMIVSNP 184 (276)
T ss_dssp SCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCST---TG-GGTTCCEEEEEECC
T ss_pred CCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEcch---hh-hcccCCccEEEECC
Confidence 34689999999997332 323467899999999999987664 367888887 43 3446789999998
Q ss_pred ------------ccccccC------------CHHHHHHHHHhhccCCcEEEEEecCcchHHHHHHhhhhcCCCchhhhHH
Q 022305 206 ------------VSVDYLT------------KPIEVFKEMCQVLKPGGLAIVSFSNRCFWTKAISIWTSTGDADHVMIVG 261 (299)
Q Consensus 206 ------------~~l~~~~------------d~~~~l~ei~rvLkpGG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (299)
.+++|.+ +...+++++.++|||||.++++.+.. ....+.
T Consensus 185 Py~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~~~~-----------------~~~~~~ 247 (276)
T 2b3t_A 185 PYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQ-----------------QGEAVR 247 (276)
T ss_dssp CCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEECCSS-----------------CHHHHH
T ss_pred CCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEECch-----------------HHHHHH
Confidence 3444433 35788999999999999999975321 112234
Q ss_pred HHHHHhCCCCCCeeeecCCCCCCCCCeEEEEEEe
Q 022305 262 AYFHYAGGYEPPQAVDISPNPGRSDPMYVVYSRK 295 (299)
Q Consensus 262 ~~~~~~aGF~~v~~~~~~~~~~~~~p~~~v~arK 295 (299)
+.+ ..+||..+++..-. ..-..+++++|
T Consensus 248 ~~l-~~~Gf~~v~~~~d~-----~g~~r~~~~~~ 275 (276)
T 2b3t_A 248 QAF-ILAGYHDVETCRDY-----GDNERVTLGRY 275 (276)
T ss_dssp HHH-HHTTCTTCCEEECT-----TSSEEEEEEEC
T ss_pred HHH-HHCCCcEEEEEecC-----CCCCcEEEEEE
Confidence 444 34799988765421 12334555665
No 139
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=99.36 E-value=1.5e-12 Score=121.25 Aligned_cols=91 Identities=10% Similarity=0.042 Sum_probs=76.0
Q ss_pred cCCceeeccCcCCc--cccCCCCCCCeEEEEeCCHHHHHhcCC--CCcEEEeccCCCCCCCCCCCCeeEEEecccccccC
Q 022305 137 YYSEVFPPSNTPGV--SHFPPGYKQDRIVGMGMNEEELKRNPV--LTEYVVQDLNLNPKLPFEDNSFDVITNVVSVDYLT 212 (299)
Q Consensus 137 ~~~~vLDiGcG~G~--~~~~~~~~~~~v~gvD~S~~ml~~a~~--~~~~~~~D~~~~~~lpf~~~~FD~Vis~~~l~~~~ 212 (299)
...+|||+|||+|. ..+...+++.+++++|+ +.|++.+++ .++++.+|+ .. +++ .||+|++.+++||++
T Consensus 193 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~v~~~~~d~---~~-~~~--~~D~v~~~~vlh~~~ 265 (358)
T 1zg3_A 193 GLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVVGNLTGNENLNFVGGDM---FK-SIP--SADAVLLKWVLHDWN 265 (358)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHHSSCCCCSSEEEEECCT---TT-CCC--CCSEEEEESCGGGSC
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHHhhcccCCCcEEEeCcc---CC-CCC--CceEEEEcccccCCC
Confidence 34789999999996 33444456789999999 799998875 488899998 55 555 499999999999999
Q ss_pred CHH--HHHHHHHhhccC---CcEEEEE
Q 022305 213 KPI--EVFKEMCQVLKP---GGLAIVS 234 (299)
Q Consensus 213 d~~--~~l~ei~rvLkp---GG~lii~ 234 (299)
|+. ++|++++++||| ||.++|.
T Consensus 266 d~~~~~~l~~~~~~L~p~~~gG~l~i~ 292 (358)
T 1zg3_A 266 DEQSLKILKNSKEAISHKGKDGKVIII 292 (358)
T ss_dssp HHHHHHHHHHHHHHTGGGGGGCEEEEE
T ss_pred HHHHHHHHHHHHHhCCCCCCCcEEEEE
Confidence 877 999999999999 9988775
No 140
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.36 E-value=2.3e-13 Score=116.60 Aligned_cols=92 Identities=11% Similarity=-0.004 Sum_probs=75.2
Q ss_pred cCCceeeccCcCCccccCCCCCCCeEEEEeCCHHHHHhcCC--------CCcEEEeccCCCCCCCCCCCCeeEEEecccc
Q 022305 137 YYSEVFPPSNTPGVSHFPPGYKQDRIVGMGMNEEELKRNPV--------LTEYVVQDLNLNPKLPFEDNSFDVITNVVSV 208 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~~~~~~~~~~~v~gvD~S~~ml~~a~~--------~~~~~~~D~~~~~~lpf~~~~FD~Vis~~~l 208 (299)
...+|||+|||+|.........+.+|+|+|+|+.+++.+++ +++++.+|. ...+.++++||+|++..++
T Consensus 77 ~~~~vLdiG~G~G~~~~~la~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~---~~~~~~~~~~D~i~~~~~~ 153 (210)
T 3lbf_A 77 PQSRVLEIGTGSGYQTAILAHLVQHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDG---WQGWQARAPFDAIIVTAAP 153 (210)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHSSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCG---GGCCGGGCCEEEEEESSBC
T ss_pred CCCEEEEEcCCCCHHHHHHHHhCCEEEEEecCHHHHHHHHHHHHHcCCCceEEEECCc---ccCCccCCCccEEEEccch
Confidence 45789999999997333222236899999999999987764 367889998 5666667899999999999
Q ss_pred cccCCHHHHHHHHHhhccCCcEEEEEecC
Q 022305 209 DYLTKPIEVFKEMCQVLKPGGLAIVSFSN 237 (299)
Q Consensus 209 ~~~~d~~~~l~ei~rvLkpGG~lii~~~~ 237 (299)
+|+++ ++.++|||||.+++.+++
T Consensus 154 ~~~~~------~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 154 PEIPT------ALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp SSCCT------HHHHTEEEEEEEEEEECS
T ss_pred hhhhH------HHHHhcccCcEEEEEEcC
Confidence 99986 689999999999999876
No 141
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.35 E-value=7.4e-13 Score=113.04 Aligned_cols=91 Identities=9% Similarity=0.040 Sum_probs=72.7
Q ss_pred CCceeeccCcCCcccc--CCCCCCCeEEEEeCCHHHHHhcCC--------CCcEEEeccCCCCCCCCCCCCeeEEEeccc
Q 022305 138 YSEVFPPSNTPGVSHF--PPGYKQDRIVGMGMNEEELKRNPV--------LTEYVVQDLNLNPKLPFEDNSFDVITNVVS 207 (299)
Q Consensus 138 ~~~vLDiGcG~G~~~~--~~~~~~~~v~gvD~S~~ml~~a~~--------~~~~~~~D~~~~~~lpf~~~~FD~Vis~~~ 207 (299)
..+|||+|||+|.... ....++.+++|+|+|+.|++.+++ +++++.+|+ ..++ ++++||+|++..
T Consensus 66 ~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~---~~~~-~~~~~D~i~~~~- 140 (207)
T 1jsx_A 66 GERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRV---EEFP-SEPPFDGVISRA- 140 (207)
T ss_dssp SSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCT---TTSC-CCSCEEEEECSC-
T ss_pred CCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecch---hhCC-ccCCcCEEEEec-
Confidence 4689999999997332 223457899999999999987654 277888998 6655 457899999864
Q ss_pred ccccCCHHHHHHHHHhhccCCcEEEEEec
Q 022305 208 VDYLTKPIEVFKEMCQVLKPGGLAIVSFS 236 (299)
Q Consensus 208 l~~~~d~~~~l~ei~rvLkpGG~lii~~~ 236 (299)
+.++..+++++.++|||||.+++...
T Consensus 141 ---~~~~~~~l~~~~~~L~~gG~l~~~~~ 166 (207)
T 1jsx_A 141 ---FASLNDMVSWCHHLPGEQGRFYALKG 166 (207)
T ss_dssp ---SSSHHHHHHHHTTSEEEEEEEEEEES
T ss_pred ---cCCHHHHHHHHHHhcCCCcEEEEEeC
Confidence 36788999999999999999998744
No 142
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.35 E-value=5.9e-13 Score=121.64 Aligned_cols=144 Identities=12% Similarity=0.070 Sum_probs=92.6
Q ss_pred cCCceeeccCcCCc--cccCCCCCCCeEEEEeCCHHHHHhcCC------------CCcEEEeccCCCCCCCC--CCCCee
Q 022305 137 YYSEVFPPSNTPGV--SHFPPGYKQDRIVGMGMNEEELKRNPV------------LTEYVVQDLNLNPKLPF--EDNSFD 200 (299)
Q Consensus 137 ~~~~vLDiGcG~G~--~~~~~~~~~~~v~gvD~S~~ml~~a~~------------~~~~~~~D~~~~~~lpf--~~~~FD 200 (299)
...+|||+|||+|. ..+....+..+|+++|+|+.|++.+++ +++++.+|+ ..++. .+++||
T Consensus 95 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~---~~~~~~~~~~~fD 171 (304)
T 3bwc_A 95 KPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDG---LAFVRQTPDNTYD 171 (304)
T ss_dssp SCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCH---HHHHHSSCTTCEE
T ss_pred CCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcH---HHHHHhccCCcee
Confidence 45689999999996 223333346799999999999987653 367888888 55543 478999
Q ss_pred EEEecccccccCCH----HHHHHHHHhhccCCcEEEEEecCcchHHHHHHhhhhcCCCchhhhHHHHHHHhCCCCCCeee
Q 022305 201 VITNVVSVDYLTKP----IEVFKEMCQVLKPGGLAIVSFSNRCFWTKAISIWTSTGDADHVMIVGAYFHYAGGYEPPQAV 276 (299)
Q Consensus 201 ~Vis~~~l~~~~d~----~~~l~ei~rvLkpGG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aGF~~v~~~ 276 (299)
+|++....++.+.. .++++++.|+|||||.+++...+..... .....+.+.+ +++||..++..
T Consensus 172 vIi~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~------------~~~~~~~~~l-~~~GF~~v~~~ 238 (304)
T 3bwc_A 172 VVIIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQGESIWLDL------------ELIEKMSRFI-RETGFASVQYA 238 (304)
T ss_dssp EEEEECC---------CCHHHHHHHHHHEEEEEEEEEEECCTTTCH------------HHHHHHHHHH-HHHTCSEEEEE
T ss_pred EEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEecCCcccch------------HHHHHHHHHH-HhCCCCcEEEE
Confidence 99997666554332 6899999999999999998765431100 1111222233 45789988877
Q ss_pred ecCCCCCCCCCeEEEEEEec
Q 022305 277 DISPNPGRSDPMYVVYSRKA 296 (299)
Q Consensus 277 ~~~~~~~~~~p~~~v~arK~ 296 (299)
...-+......+-.++|.|.
T Consensus 239 ~~~vP~yp~g~w~f~~as~~ 258 (304)
T 3bwc_A 239 LMHVPTYPCGSIGTLVCSKK 258 (304)
T ss_dssp ECCCTTSTTSCCEEEEEESS
T ss_pred EeecccccCcceEEEEEeCC
Confidence 65433222344555566663
No 143
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.34 E-value=1.4e-12 Score=110.83 Aligned_cols=94 Identities=17% Similarity=0.213 Sum_probs=70.5
Q ss_pred CCceeeccCcCCcc--ccCCCCC--CCeEEEEeCCHHHHHhcCCCCcEEEeccCCCCCCC--------------------
Q 022305 138 YSEVFPPSNTPGVS--HFPPGYK--QDRIVGMGMNEEELKRNPVLTEYVVQDLNLNPKLP-------------------- 193 (299)
Q Consensus 138 ~~~vLDiGcG~G~~--~~~~~~~--~~~v~gvD~S~~ml~~a~~~~~~~~~D~~~~~~lp-------------------- 193 (299)
..+|||+|||+|.. .+....+ +.+|+|+|+|+.+ ...+++++++|+ ...+
T Consensus 23 ~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~---~~~~v~~~~~d~---~~~~~~~~~~~~~i~~~~~~~~~~ 96 (201)
T 2plw_A 23 NKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD---PIPNVYFIQGEI---GKDNMNNIKNINYIDNMNNNSVDY 96 (201)
T ss_dssp TEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC---CCTTCEEEECCT---TTTSSCCC-----------CHHHH
T ss_pred CCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC---CCCCceEEEccc---cchhhhhhccccccccccchhhHH
Confidence 45899999999962 2333334 5799999999932 223588999998 6665
Q ss_pred -----CCCCCeeEEEecccccccC----CH-------HHHHHHHHhhccCCcEEEEEecC
Q 022305 194 -----FEDNSFDVITNVVSVDYLT----KP-------IEVFKEMCQVLKPGGLAIVSFSN 237 (299)
Q Consensus 194 -----f~~~~FD~Vis~~~l~~~~----d~-------~~~l~ei~rvLkpGG~lii~~~~ 237 (299)
+++++||+|++..++++.. +. ..+++++.++|||||.+++.+..
T Consensus 97 ~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~ 156 (201)
T 2plw_A 97 KLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMYL 156 (201)
T ss_dssp HHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred HHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEeC
Confidence 5678999999998877642 22 24789999999999999987543
No 144
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.33 E-value=2.6e-13 Score=115.70 Aligned_cols=103 Identities=11% Similarity=0.023 Sum_probs=63.3
Q ss_pred HHHHhh--hcCCceeeccCcCCccc--cCCCCCCCeEEEEeCCHHHHHhcCCC-------CcEEEeccCCCCCCCCCC--
Q 022305 130 AIAALT--KYYSEVFPPSNTPGVSH--FPPGYKQDRIVGMGMNEEELKRNPVL-------TEYVVQDLNLNPKLPFED-- 196 (299)
Q Consensus 130 ~~~~l~--~~~~~vLDiGcG~G~~~--~~~~~~~~~v~gvD~S~~ml~~a~~~-------~~~~~~D~~~~~~lpf~~-- 196 (299)
+++.+. ....+|||+|||+|... +....++.+++|+|+|+.|++.++++ ++++++|+ .+ ++++
T Consensus 21 ~~~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~---~~-~~~~~~ 96 (215)
T 4dzr_A 21 AIRFLKRMPSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFGAVVDWAAADG---IE-WLIERA 96 (215)
T ss_dssp HHHHHTTCCTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC-------------------CCHHHH---HH-HHHHHH
T ss_pred HHHHhhhcCCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhCCceEEEEcch---Hh-hhhhhh
Confidence 344443 34568999999999632 23334567999999999999988874 45666777 44 5555
Q ss_pred ---CCeeEEEecccccccCCH--------------------------HHHHHHHHhhccCCcE-EEEEec
Q 022305 197 ---NSFDVITNVVSVDYLTKP--------------------------IEVFKEMCQVLKPGGL-AIVSFS 236 (299)
Q Consensus 197 ---~~FD~Vis~~~l~~~~d~--------------------------~~~l~ei~rvLkpGG~-lii~~~ 236 (299)
++||+|+++..+++..+. ..+++++.++|||||. +++.++
T Consensus 97 ~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 166 (215)
T 4dzr_A 97 ERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEVG 166 (215)
T ss_dssp HTTCCBSEEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEECT
T ss_pred hccCcccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEEC
Confidence 899999996444332211 7788999999999999 677654
No 145
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.33 E-value=2e-12 Score=115.30 Aligned_cols=149 Identities=13% Similarity=0.081 Sum_probs=101.0
Q ss_pred cHHHHHHhhh--cCCceeeccCcCCcccc--CCCCCCCeEEEEeCCHHHHHhcCC------------CCcEEEeccCCCC
Q 022305 127 DDPAIAALTK--YYSEVFPPSNTPGVSHF--PPGYKQDRIVGMGMNEEELKRNPV------------LTEYVVQDLNLNP 190 (299)
Q Consensus 127 ~~~~~~~l~~--~~~~vLDiGcG~G~~~~--~~~~~~~~v~gvD~S~~ml~~a~~------------~~~~~~~D~~~~~ 190 (299)
+..++..+.. ...+|||+|||+|...+ ....+..+|+|+|+++.|++.+++ +++++++|+ .
T Consensus 24 D~~lL~~~~~~~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~---~ 100 (260)
T 2ozv_A 24 DAMLLASLVADDRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADV---T 100 (260)
T ss_dssp HHHHHHHTCCCCSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCT---T
T ss_pred HHHHHHHHhcccCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCH---H
Confidence 3334454432 34589999999997322 333346799999999999986543 267888998 5
Q ss_pred CC-------CCCCCCeeEEEecccccc------------------cCCHHHHHHHHHhhccCCcEEEEEecCcchHHHHH
Q 022305 191 KL-------PFEDNSFDVITNVVSVDY------------------LTKPIEVFKEMCQVLKPGGLAIVSFSNRCFWTKAI 245 (299)
Q Consensus 191 ~l-------pf~~~~FD~Vis~~~l~~------------------~~d~~~~l~ei~rvLkpGG~lii~~~~~~~~~~~~ 245 (299)
++ ++++++||+|+++--+.. ..+...+++++.++|||||.+++..+... .
T Consensus 101 ~~~~~~~~~~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~-~---- 175 (260)
T 2ozv_A 101 LRAKARVEAGLPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLISRPQS-V---- 175 (260)
T ss_dssp CCHHHHHHTTCCTTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEECGGG-H----
T ss_pred HHhhhhhhhccCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEEcHHH-H----
Confidence 55 356789999999832211 12478899999999999999988755321 0
Q ss_pred HhhhhcCCCchhhhHHHHHHHhCCCCCCeeeecCCCCCCCCCeEEEEEEecC
Q 022305 246 SIWTSTGDADHVMIVGAYFHYAGGYEPPQAVDISPNPGRSDPMYVVYSRKAS 297 (299)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~aGF~~v~~~~~~~~~~~~~p~~~v~arK~~ 297 (299)
.-+...+. ..|....+..+.+.++.....+++.++|.+
T Consensus 176 ------------~~~~~~l~--~~~~~~~i~~v~~~~~~~~~~~lv~~~k~~ 213 (260)
T 2ozv_A 176 ------------AEIIAACG--SRFGGLEITLIHPRPGEDAVRMLVTAIKGS 213 (260)
T ss_dssp ------------HHHHHHHT--TTEEEEEEEEEESSTTSCCCEEEEEEEETC
T ss_pred ------------HHHHHHHH--hcCCceEEEEEcCCCCCCceEEEEEEEeCC
Confidence 11122222 237777877777777666777888888865
No 146
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.32 E-value=4.5e-13 Score=126.46 Aligned_cols=95 Identities=13% Similarity=0.008 Sum_probs=75.0
Q ss_pred hcCCceeeccCcCCccccCC--CCCCCeEEEEeCCHHHHHhcCC-----------------CCcEEEeccCCCCCCCCCC
Q 022305 136 KYYSEVFPPSNTPGVSHFPP--GYKQDRIVGMGMNEEELKRNPV-----------------LTEYVVQDLNLNPKLPFED 196 (299)
Q Consensus 136 ~~~~~vLDiGcG~G~~~~~~--~~~~~~v~gvD~S~~ml~~a~~-----------------~~~~~~~D~~~~~~lpf~~ 196 (299)
+...+|||+|||+|...+.. ..+..+++|||+|+.|++.|++ +++++++|+ .++++.+
T Consensus 172 ~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD~---~~lp~~d 248 (438)
T 3uwp_A 172 TDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDF---LSEEWRE 248 (438)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECCT---TSHHHHH
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECcc---cCCcccc
Confidence 34568999999999744322 2233469999999998876542 478999999 7888754
Q ss_pred --CCeeEEEecccccccCCHHHHHHHHHhhccCCcEEEEE
Q 022305 197 --NSFDVITNVVSVDYLTKPIEVFKEMCQVLKPGGLAIVS 234 (299)
Q Consensus 197 --~~FD~Vis~~~l~~~~d~~~~l~ei~rvLkpGG~lii~ 234 (299)
..||+|+++..+ +.+++...|.+++|+|||||.||+.
T Consensus 249 ~~~~aDVVf~Nn~~-F~pdl~~aL~Ei~RvLKPGGrIVss 287 (438)
T 3uwp_A 249 RIANTSVIFVNNFA-FGPEVDHQLKERFANMKEGGRIVSS 287 (438)
T ss_dssp HHHTCSEEEECCTT-CCHHHHHHHHHHHTTSCTTCEEEES
T ss_pred ccCCccEEEEcccc-cCchHHHHHHHHHHcCCCCcEEEEe
Confidence 479999998765 4578899999999999999999875
No 147
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.32 E-value=7.8e-13 Score=117.61 Aligned_cols=129 Identities=12% Similarity=0.186 Sum_probs=90.9
Q ss_pred hcCCceeeccCcCCccccCCCCCCCeEEEEeCCHHHHHhcCCC-------CcEEEeccCCCCCCCCCCCCeeEEEecccc
Q 022305 136 KYYSEVFPPSNTPGVSHFPPGYKQDRIVGMGMNEEELKRNPVL-------TEYVVQDLNLNPKLPFEDNSFDVITNVVSV 208 (299)
Q Consensus 136 ~~~~~vLDiGcG~G~~~~~~~~~~~~v~gvD~S~~ml~~a~~~-------~~~~~~D~~~~~~lpf~~~~FD~Vis~~~l 208 (299)
....+|||+|||+|.........+.+|+|+|+|+.+++.++++ +++..+|+ .. ++++++||+|+++...
T Consensus 119 ~~~~~VLDiGcG~G~l~~~la~~g~~v~gvDi~~~~v~~a~~n~~~~~~~v~~~~~d~---~~-~~~~~~fD~Vv~n~~~ 194 (254)
T 2nxc_A 119 RPGDKVLDLGTGSGVLAIAAEKLGGKALGVDIDPMVLPQAEANAKRNGVRPRFLEGSL---EA-ALPFGPFDLLVANLYA 194 (254)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTTCEEEEEESCGGGHHHHHHHHHHTTCCCEEEESCH---HH-HGGGCCEEEEEEECCH
T ss_pred CCCCEEEEecCCCcHHHHHHHHhCCeEEEEECCHHHHHHHHHHHHHcCCcEEEEECCh---hh-cCcCCCCCEEEECCcH
Confidence 4457899999999974333332345999999999999877653 67888887 33 2456789999998655
Q ss_pred cccCCHHHHHHHHHhhccCCcEEEEEecCcchHHHHHHhhhhcCCCchhhhHHHHHHHhCCCCCCeeeecCCCCCCCCCe
Q 022305 209 DYLTKPIEVFKEMCQVLKPGGLAIVSFSNRCFWTKAISIWTSTGDADHVMIVGAYFHYAGGYEPPQAVDISPNPGRSDPM 288 (299)
Q Consensus 209 ~~~~d~~~~l~ei~rvLkpGG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aGF~~v~~~~~~~~~~~~~p~ 288 (299)
++ ...+++++.++|||||.++++..... ....+.+.+ ..+||+.+++... +.+
T Consensus 195 ~~---~~~~l~~~~~~LkpgG~lils~~~~~----------------~~~~v~~~l-~~~Gf~~~~~~~~-------~~W 247 (254)
T 2nxc_A 195 EL---HAALAPRYREALVPGGRALLTGILKD----------------RAPLVREAM-AGAGFRPLEEAAE-------GEW 247 (254)
T ss_dssp HH---HHHHHHHHHHHEEEEEEEEEEEEEGG----------------GHHHHHHHH-HHTTCEEEEEEEE-------TTE
T ss_pred HH---HHHHHHHHHHHcCCCCEEEEEeeccC----------------CHHHHHHHH-HHCCCEEEEEecc-------CCe
Confidence 54 57899999999999999998643211 112333334 4489998776542 356
Q ss_pred EEEEEEe
Q 022305 289 YVVYSRK 295 (299)
Q Consensus 289 ~~v~arK 295 (299)
..++++|
T Consensus 248 ~~l~~~k 254 (254)
T 2nxc_A 248 VLLAYGR 254 (254)
T ss_dssp EEEEEEC
T ss_pred EEEEEEC
Confidence 6677765
No 148
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.32 E-value=3.2e-12 Score=118.56 Aligned_cols=91 Identities=13% Similarity=0.105 Sum_probs=73.4
Q ss_pred CCceeeccCcCCccccCC-CCCCCeEEEEeCCHHHHHhcCC---------CCcEEEeccCCCCCCCCCCCCeeEEEecc-
Q 022305 138 YSEVFPPSNTPGVSHFPP-GYKQDRIVGMGMNEEELKRNPV---------LTEYVVQDLNLNPKLPFEDNSFDVITNVV- 206 (299)
Q Consensus 138 ~~~vLDiGcG~G~~~~~~-~~~~~~v~gvD~S~~ml~~a~~---------~~~~~~~D~~~~~~lpf~~~~FD~Vis~~- 206 (299)
..+|||+|||+|...... .....+|+|+|+|+ |++.|++ +++++.+|+ +++++++++||+|++..
T Consensus 65 ~~~VLDiGcGtG~ls~~la~~g~~~v~gvD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~---~~~~~~~~~~D~Ivs~~~ 140 (340)
T 2fyt_A 65 DKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSE-ILYQAMDIIRLNKLEDTITLIKGKI---EEVHLPVEKVDVIISEWM 140 (340)
T ss_dssp TCEEEEETCTTSHHHHHHHHTTCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCT---TTSCCSCSCEEEEEECCC
T ss_pred CCEEEEeeccCcHHHHHHHHcCCCEEEEEChHH-HHHHHHHHHHHcCCCCcEEEEEeeH---HHhcCCCCcEEEEEEcCc
Confidence 468999999999733322 22335999999996 8887653 478899999 88888889999999876
Q ss_pred --cccccCCHHHHHHHHHhhccCCcEEE
Q 022305 207 --SVDYLTKPIEVFKEMCQVLKPGGLAI 232 (299)
Q Consensus 207 --~l~~~~d~~~~l~ei~rvLkpGG~li 232 (299)
.+.|..++..+++++.|+|||||.++
T Consensus 141 ~~~l~~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 141 GYFLLFESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp BTTBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred hhhccCHHHHHHHHHHHHhhcCCCcEEE
Confidence 46666788899999999999999887
No 149
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.32 E-value=6.3e-13 Score=120.63 Aligned_cols=91 Identities=10% Similarity=0.016 Sum_probs=64.9
Q ss_pred CceeeccCcCCcccc-CCCCCCCeEEEEeCCHHHHHhc-CCCCcEEE---eccCCCCCCC---CCCCCeeEEEecccccc
Q 022305 139 SEVFPPSNTPGVSHF-PPGYKQDRIVGMGMNEEELKRN-PVLTEYVV---QDLNLNPKLP---FEDNSFDVITNVVSVDY 210 (299)
Q Consensus 139 ~~vLDiGcG~G~~~~-~~~~~~~~v~gvD~S~~ml~~a-~~~~~~~~---~D~~~~~~lp---f~~~~FD~Vis~~~l~~ 210 (299)
.++||+|||+|.... .......+|+|+|+|++||+.+ ++...... .|+ ..++ ++..+||+|++..++++
T Consensus 87 ~~vLDiGcGTG~~t~~L~~~ga~~V~aVDvs~~mL~~a~r~~~rv~~~~~~ni---~~l~~~~l~~~~fD~v~~d~sf~s 163 (291)
T 3hp7_A 87 MITIDIGASTGGFTDVMLQNGAKLVYAVDVGTNQLVWKLRQDDRVRSMEQYNF---RYAEPVDFTEGLPSFASIDVSFIS 163 (291)
T ss_dssp CEEEEETCTTSHHHHHHHHTTCSEEEEECSSSSCSCHHHHTCTTEEEECSCCG---GGCCGGGCTTCCCSEEEECCSSSC
T ss_pred cEEEecCCCccHHHHHHHhCCCCEEEEEECCHHHHHHHHHhCcccceecccCc---eecchhhCCCCCCCEEEEEeeHhh
Confidence 589999999996432 2222346999999999999873 32223222 233 2232 34456999999888775
Q ss_pred cCCHHHHHHHHHhhccCCcEEEEEe
Q 022305 211 LTKPIEVFKEMCQVLKPGGLAIVSF 235 (299)
Q Consensus 211 ~~d~~~~l~ei~rvLkpGG~lii~~ 235 (299)
+ ..+|.+++|+|||||.+++.+
T Consensus 164 l---~~vL~e~~rvLkpGG~lv~lv 185 (291)
T 3hp7_A 164 L---NLILPALAKILVDGGQVVALV 185 (291)
T ss_dssp G---GGTHHHHHHHSCTTCEEEEEE
T ss_pred H---HHHHHHHHHHcCcCCEEEEEE
Confidence 4 889999999999999888864
No 150
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.31 E-value=5.6e-13 Score=114.25 Aligned_cols=98 Identities=14% Similarity=0.130 Sum_probs=74.6
Q ss_pred CCceeeccCcCCccccC-CCCCCCeEEEEeCCHHHHHhcCC----------CCcEEEeccCCCCCC-C-CCCCC-eeEEE
Q 022305 138 YSEVFPPSNTPGVSHFP-PGYKQDRIVGMGMNEEELKRNPV----------LTEYVVQDLNLNPKL-P-FEDNS-FDVIT 203 (299)
Q Consensus 138 ~~~vLDiGcG~G~~~~~-~~~~~~~v~gvD~S~~ml~~a~~----------~~~~~~~D~~~~~~l-p-f~~~~-FD~Vi 203 (299)
..+|||+|||+|...+. ......+|+|+|+|+.|++.+++ +++++.+|+ .++ + +++++ ||+|+
T Consensus 54 ~~~vLDlGcGtG~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~---~~~~~~~~~~~~fD~I~ 130 (201)
T 2ift_A 54 QSECLDGFAGSGSLGFEALSRQAKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSS---LDFLKQPQNQPHFDVVF 130 (201)
T ss_dssp TCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCH---HHHTTSCCSSCCEEEEE
T ss_pred CCeEEEcCCccCHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCH---HHHHHhhccCCCCCEEE
Confidence 46899999999974432 22233689999999999987654 357888887 443 2 24678 99999
Q ss_pred ecccccccCCHHHHHHHH--HhhccCCcEEEEEecCcc
Q 022305 204 NVVSVDYLTKPIEVFKEM--CQVLKPGGLAIVSFSNRC 239 (299)
Q Consensus 204 s~~~l~~~~d~~~~l~ei--~rvLkpGG~lii~~~~~~ 239 (299)
+...++ ..+...+++++ .|+|||||.++++.....
T Consensus 131 ~~~~~~-~~~~~~~l~~~~~~~~LkpgG~l~i~~~~~~ 167 (201)
T 2ift_A 131 LDPPFH-FNLAEQAISLLCENNWLKPNALIYVETEKDK 167 (201)
T ss_dssp ECCCSS-SCHHHHHHHHHHHTTCEEEEEEEEEEEESSS
T ss_pred ECCCCC-CccHHHHHHHHHhcCccCCCcEEEEEECCCC
Confidence 987744 66788899999 778999999999876543
No 151
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.31 E-value=6.8e-13 Score=115.30 Aligned_cols=93 Identities=16% Similarity=0.119 Sum_probs=72.9
Q ss_pred cCCceeeccCcCCccccCCCCCCCeEEEEeCCHHHHHhcCC------CCcEEEeccCCCCCCCCCCCCeeEEEecccccc
Q 022305 137 YYSEVFPPSNTPGVSHFPPGYKQDRIVGMGMNEEELKRNPV------LTEYVVQDLNLNPKLPFEDNSFDVITNVVSVDY 210 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~~~~~~~~~~~v~gvD~S~~ml~~a~~------~~~~~~~D~~~~~~lpf~~~~FD~Vis~~~l~~ 210 (299)
...+|||+|||+|.........+.+|+|+|+|+.|++.+++ +++++.+|+ ......+++||+|++..+++|
T Consensus 70 ~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d~---~~~~~~~~~fD~v~~~~~~~~ 146 (231)
T 1vbf_A 70 KGQKVLEIGTGIGYYTALIAEIVDKVVSVEINEKMYNYASKLLSYYNNIKLILGDG---TLGYEEEKPYDRVVVWATAPT 146 (231)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHSSEEEEEESCHHHHHHHHHHHTTCSSEEEEESCG---GGCCGGGCCEEEEEESSBBSS
T ss_pred CCCEEEEEcCCCCHHHHHHHHHcCEEEEEeCCHHHHHHHHHHHhhcCCeEEEECCc---ccccccCCCccEEEECCcHHH
Confidence 44689999999996333222223799999999999987765 477888998 442234678999999999999
Q ss_pred cCCHHHHHHHHHhhccCCcEEEEEecCc
Q 022305 211 LTKPIEVFKEMCQVLKPGGLAIVSFSNR 238 (299)
Q Consensus 211 ~~d~~~~l~ei~rvLkpGG~lii~~~~~ 238 (299)
+. .++.++|||||.+++.+++.
T Consensus 147 ~~------~~~~~~L~pgG~l~~~~~~~ 168 (231)
T 1vbf_A 147 LL------CKPYEQLKEGGIMILPIGVG 168 (231)
T ss_dssp CC------HHHHHTEEEEEEEEEEECSS
T ss_pred HH------HHHHHHcCCCcEEEEEEcCC
Confidence 86 47899999999999987653
No 152
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.31 E-value=1.2e-12 Score=121.33 Aligned_cols=104 Identities=13% Similarity=0.143 Sum_probs=79.0
Q ss_pred HHHHh-hhcCCceeeccCcCCccc--cCCCCCCCeEEEEeCCHHHHHhcCCC-------CcEEEeccCCCCCCCCCCCCe
Q 022305 130 AIAAL-TKYYSEVFPPSNTPGVSH--FPPGYKQDRIVGMGMNEEELKRNPVL-------TEYVVQDLNLNPKLPFEDNSF 199 (299)
Q Consensus 130 ~~~~l-~~~~~~vLDiGcG~G~~~--~~~~~~~~~v~gvD~S~~ml~~a~~~-------~~~~~~D~~~~~~lpf~~~~F 199 (299)
+++.+ .....+|||+|||+|... +....+..+|+|+|+|+.|++.++++ .+++.+|+ ... .+++|
T Consensus 188 ll~~l~~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~~d~---~~~--~~~~f 262 (343)
T 2pjd_A 188 LLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEGEVFASNV---FSE--VKGRF 262 (343)
T ss_dssp HHHHSCTTCCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTTCCCEEEECST---TTT--CCSCE
T ss_pred HHHhcCcCCCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCEEEEccc---ccc--ccCCe
Confidence 44444 334568999999999732 23333557999999999999977653 56777787 433 36789
Q ss_pred eEEEecccccc-----cCCHHHHHHHHHhhccCCcEEEEEecCc
Q 022305 200 DVITNVVSVDY-----LTKPIEVFKEMCQVLKPGGLAIVSFSNR 238 (299)
Q Consensus 200 D~Vis~~~l~~-----~~d~~~~l~ei~rvLkpGG~lii~~~~~ 238 (299)
|+|+++..+|+ ..+..++++++.|+|||||.+++..+..
T Consensus 263 D~Iv~~~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 306 (343)
T 2pjd_A 263 DMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVANAF 306 (343)
T ss_dssp EEEEECCCCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEEEEETT
T ss_pred eEEEECCCcccCccCCHHHHHHHHHHHHHhCCCCcEEEEEEcCC
Confidence 99999998885 3467899999999999999999876653
No 153
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.30 E-value=8e-13 Score=121.98 Aligned_cols=99 Identities=14% Similarity=0.197 Sum_probs=70.7
Q ss_pred cCCceeeccCcCCcccc--CCC-CCCCeEEEEeCCHHHHHhcCC-------------------CCcEEEeccCCCCCC--
Q 022305 137 YYSEVFPPSNTPGVSHF--PPG-YKQDRIVGMGMNEEELKRNPV-------------------LTEYVVQDLNLNPKL-- 192 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~~~--~~~-~~~~~v~gvD~S~~ml~~a~~-------------------~~~~~~~D~~~~~~l-- 192 (299)
...+|||+|||+|.... ... .+..+|+|+|+++.+++.|++ +++++.+|+ .++
T Consensus 105 ~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~---~~~~~ 181 (336)
T 2b25_A 105 PGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDI---SGATE 181 (336)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCT---TCCC-
T ss_pred CCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECCh---HHccc
Confidence 45689999999996332 222 234899999999999987643 477888998 555
Q ss_pred CCCCCCeeEEEecccccccCCHHHHHHHHHhhccCCcEEEEEecCcchHHH
Q 022305 193 PFEDNSFDVITNVVSVDYLTKPIEVFKEMCQVLKPGGLAIVSFSNRCFWTK 243 (299)
Q Consensus 193 pf~~~~FD~Vis~~~l~~~~d~~~~l~ei~rvLkpGG~lii~~~~~~~~~~ 243 (299)
++++++||+|++.. .++..+++++.++|||||.+++..++.....+
T Consensus 182 ~~~~~~fD~V~~~~-----~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~ 227 (336)
T 2b25_A 182 DIKSLTFDAVALDM-----LNPHVTLPVFYPHLKHGGVCAVYVVNITQVIE 227 (336)
T ss_dssp ------EEEEEECS-----SSTTTTHHHHGGGEEEEEEEEEEESSHHHHHH
T ss_pred ccCCCCeeEEEECC-----CCHHHHHHHHHHhcCCCcEEEEEeCCHHHHHH
Confidence 56778899999853 45556899999999999999988877544433
No 154
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.30 E-value=8.1e-12 Score=108.36 Aligned_cols=139 Identities=14% Similarity=0.117 Sum_probs=89.5
Q ss_pred CCceeeccCcCCccccCC--CC-CCCeEEEEeCCHHHHHhcC------CCCcEEEeccCCCCCC---CCCCCCeeEEEec
Q 022305 138 YSEVFPPSNTPGVSHFPP--GY-KQDRIVGMGMNEEELKRNP------VLTEYVVQDLNLNPKL---PFEDNSFDVITNV 205 (299)
Q Consensus 138 ~~~vLDiGcG~G~~~~~~--~~-~~~~v~gvD~S~~ml~~a~------~~~~~~~~D~~~~~~l---pf~~~~FD~Vis~ 205 (299)
..+|||+|||+|...... .. +..+|+|+|+|+.|++.+. .+++++.+|+ ... ...+++||+|++.
T Consensus 74 ~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~~~v~~~~~d~---~~~~~~~~~~~~~D~v~~~ 150 (227)
T 1g8a_A 74 GKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDA---TKPEEYRALVPKVDVIFED 150 (227)
T ss_dssp TCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCT---TCGGGGTTTCCCEEEEEEC
T ss_pred CCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhccCCCEEEEccC---CCcchhhcccCCceEEEEC
Confidence 458999999999733322 21 3479999999998876542 2478899998 442 1224689999986
Q ss_pred ccccccCCHH-HHHHHHHhhccCCcEEEEEecCcchHHHHHHhhhhcCCCchhhhHHHHHH--HhCCCCCCeeeecCCCC
Q 022305 206 VSVDYLTKPI-EVFKEMCQVLKPGGLAIVSFSNRCFWTKAISIWTSTGDADHVMIVGAYFH--YAGGYEPPQAVDISPNP 282 (299)
Q Consensus 206 ~~l~~~~d~~-~~l~ei~rvLkpGG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~aGF~~v~~~~~~~~~ 282 (299)
.. .++.. .+++++.++|||||.+++.+..... ......+ .+..+.+. ..+ |+.++..++.+.
T Consensus 151 ~~---~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~---------~~~~~~~-~~~~~~l~~l~~~-f~~~~~~~~~~~- 215 (227)
T 1g8a_A 151 VA---QPTQAKILIDNAEVYLKRGGYGMIAVKSRSI---------DVTKEPE-QVFREVERELSEY-FEVIERLNLEPY- 215 (227)
T ss_dssp CC---STTHHHHHHHHHHHHEEEEEEEEEEEEGGGT---------CTTSCHH-HHHHHHHHHHHTT-SEEEEEEECTTT-
T ss_pred CC---CHhHHHHHHHHHHHhcCCCCEEEEEEecCCC---------CCCCChh-hhhHHHHHHHHhh-ceeeeEeccCcc-
Confidence 54 23443 4599999999999999887543210 0011111 22222221 445 998888777542
Q ss_pred CCCCCeEEEEEEec
Q 022305 283 GRSDPMYVVYSRKA 296 (299)
Q Consensus 283 ~~~~p~~~v~arK~ 296 (299)
....|.++++|.
T Consensus 216 --~~~~~~~~~~~~ 227 (227)
T 1g8a_A 216 --EKDHALFVVRKT 227 (227)
T ss_dssp --SSSEEEEEEECC
T ss_pred --cCCCEEEEEEeC
Confidence 246789999873
No 155
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.29 E-value=9.8e-13 Score=122.40 Aligned_cols=94 Identities=12% Similarity=0.119 Sum_probs=74.7
Q ss_pred cCCceeeccCcCCccccCC-CCCCCeEEEEeCCHHHHHhcCC---------CCcEEEeccCCCCCCCCCCCCeeEEEecc
Q 022305 137 YYSEVFPPSNTPGVSHFPP-GYKQDRIVGMGMNEEELKRNPV---------LTEYVVQDLNLNPKLPFEDNSFDVITNVV 206 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~~~~~-~~~~~~v~gvD~S~~ml~~a~~---------~~~~~~~D~~~~~~lpf~~~~FD~Vis~~ 206 (299)
...+|||+|||+|...... ..+..+|+|+|+|+ |++.|++ +++++.+|+ +++++++++||+|++..
T Consensus 66 ~~~~VLDvGcG~G~~~~~la~~g~~~v~gvD~s~-~l~~a~~~~~~~~~~~~v~~~~~d~---~~~~~~~~~fD~Iis~~ 141 (349)
T 3q7e_A 66 KDKVVLDVGSGTGILCMFAAKAGARKVIGIECSS-ISDYAVKIVKANKLDHVVTIIKGKV---EEVELPVEKVDIIISEW 141 (349)
T ss_dssp TTCEEEEESCTTSHHHHHHHHTTCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCT---TTCCCSSSCEEEEEECC
T ss_pred CCCEEEEEeccchHHHHHHHHCCCCEEEEECcHH-HHHHHHHHHHHcCCCCcEEEEECcH---HHccCCCCceEEEEEcc
Confidence 3468999999999733322 22345999999995 8887654 278999999 88899889999999976
Q ss_pred c---ccccCCHHHHHHHHHhhccCCcEEEEE
Q 022305 207 S---VDYLTKPIEVFKEMCQVLKPGGLAIVS 234 (299)
Q Consensus 207 ~---l~~~~d~~~~l~ei~rvLkpGG~lii~ 234 (299)
+ +.+..++..+++++.|+|||||.++.+
T Consensus 142 ~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~ 172 (349)
T 3q7e_A 142 MGYCLFYESMLNTVLHARDKWLAPDGLIFPD 172 (349)
T ss_dssp CBBTBTBTCCHHHHHHHHHHHEEEEEEEESC
T ss_pred ccccccCchhHHHHHHHHHHhCCCCCEEccc
Confidence 5 444478999999999999999998754
No 156
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.28 E-value=2.1e-12 Score=115.87 Aligned_cols=136 Identities=12% Similarity=0.097 Sum_probs=94.8
Q ss_pred cCCceeeccCcCCcccc--CCC-CCCCeEEEEeCCHHHHHhcCC---------CCcEEEeccCCCCCCCCCCCCeeEEEe
Q 022305 137 YYSEVFPPSNTPGVSHF--PPG-YKQDRIVGMGMNEEELKRNPV---------LTEYVVQDLNLNPKLPFEDNSFDVITN 204 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~~~--~~~-~~~~~v~gvD~S~~ml~~a~~---------~~~~~~~D~~~~~~lpf~~~~FD~Vis 204 (299)
...+|||+|||+|.... ... .+..+++++|+|+.+++.+++ +++++.+|+ .+. +++++||+|++
T Consensus 112 ~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~---~~~-~~~~~~D~V~~ 187 (277)
T 1o54_A 112 EGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDI---SEG-FDEKDVDALFL 187 (277)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCG---GGC-CSCCSEEEEEE
T ss_pred CCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCH---HHc-ccCCccCEEEE
Confidence 34689999999996322 222 346899999999999987654 367788888 444 66678999998
Q ss_pred cccccccCCHHHHHHHHHhhccCCcEEEEEecCcchHHHHHHhhhhcCCCchhhhHHHHHHHhCCCCCCeeeecCCCC--
Q 022305 205 VVSVDYLTKPIEVFKEMCQVLKPGGLAIVSFSNRCFWTKAISIWTSTGDADHVMIVGAYFHYAGGYEPPQAVDISPNP-- 282 (299)
Q Consensus 205 ~~~l~~~~d~~~~l~ei~rvLkpGG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aGF~~v~~~~~~~~~-- 282 (299)
+.+++..+++++.++|||||.+++..+...... .+.+.+. ..||..+++.+.....
T Consensus 188 -----~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~----------------~~~~~l~-~~gf~~~~~~~~~~~~~~ 245 (277)
T 1o54_A 188 -----DVPDPWNYIDKCWEALKGGGRFATVCPTTNQVQ----------------ETLKKLQ-ELPFIRIEVWESLFRPYK 245 (277)
T ss_dssp -----CCSCGGGTHHHHHHHEEEEEEEEEEESSHHHHH----------------HHHHHHH-HSSEEEEEEECCCCCCEE
T ss_pred -----CCcCHHHHHHHHHHHcCCCCEEEEEeCCHHHHH----------------HHHHHHH-HCCCceeEEEEEeeeeeE
Confidence 357888999999999999999999876432111 1122232 3778777665542221
Q ss_pred -----------CCCCCeEEEEEEecCC
Q 022305 283 -----------GRSDPMYVVYSRKAST 298 (299)
Q Consensus 283 -----------~~~~p~~~v~arK~~~ 298 (299)
....+-|++.|||...
T Consensus 246 ~~~~~~rp~~~~~~~~~~li~ark~~~ 272 (277)
T 1o54_A 246 PVPERLRPVDRMVAHTAYMIFATKVCR 272 (277)
T ss_dssp CCTTSCEECSCCCCCSCEEEEEEECSC
T ss_pred eccceeCCCccccCCCeEEEEEEecCC
Confidence 1235679999999753
No 157
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.28 E-value=2.6e-13 Score=111.86 Aligned_cols=98 Identities=14% Similarity=0.157 Sum_probs=73.9
Q ss_pred cCCceeeccCcCCccccCCCCCCCeEEEEeCCHHHHHhcCC-------CCcEEEeccCCCCC-CC-C--CCCCeeEEEec
Q 022305 137 YYSEVFPPSNTPGVSHFPPGYKQDRIVGMGMNEEELKRNPV-------LTEYVVQDLNLNPK-LP-F--EDNSFDVITNV 205 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~~~~~~~~~~~v~gvD~S~~ml~~a~~-------~~~~~~~D~~~~~~-lp-f--~~~~FD~Vis~ 205 (299)
...+|||+|||+|.........+.+++|+|+|+.|++.+++ +++++++|+ .+ ++ + .+++||+|++.
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~---~~~~~~~~~~~~~~D~i~~~ 117 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASEGWEAVLVEKDPEAVRLLKENVRRTGLGARVVALPV---EVFLPEAKAQGERFTVAFMA 117 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHTCCCEEECSCH---HHHHHHHHHTTCCEEEEEEC
T ss_pred CCCeEEEeCCCcCHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHHcCCceEEEeccH---HHHHHhhhccCCceEEEEEC
Confidence 34689999999997443333334569999999999998775 478888887 44 22 1 13489999999
Q ss_pred ccccccCCHHHHHHHHH--hhccCCcEEEEEecCcc
Q 022305 206 VSVDYLTKPIEVFKEMC--QVLKPGGLAIVSFSNRC 239 (299)
Q Consensus 206 ~~l~~~~d~~~~l~ei~--rvLkpGG~lii~~~~~~ 239 (299)
..++ .+..++++++. ++|||||.++++++...
T Consensus 118 ~~~~--~~~~~~~~~~~~~~~L~~gG~~~~~~~~~~ 151 (171)
T 1ws6_A 118 PPYA--MDLAALFGELLASGLVEAGGLYVLQHPKDL 151 (171)
T ss_dssp CCTT--SCTTHHHHHHHHHTCEEEEEEEEEEEETTS
T ss_pred CCCc--hhHHHHHHHHHhhcccCCCcEEEEEeCCcc
Confidence 7765 56677777777 99999999999877644
No 158
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.27 E-value=7.1e-14 Score=122.45 Aligned_cols=94 Identities=12% Similarity=0.078 Sum_probs=77.7
Q ss_pred cCCceeeccCcCCccccCCCCCCCeEEEEeCCHHHHHhcCC---------CCcEEEeccCCCCCCCCCCCCeeEEEeccc
Q 022305 137 YYSEVFPPSNTPGVSHFPPGYKQDRIVGMGMNEEELKRNPV---------LTEYVVQDLNLNPKLPFEDNSFDVITNVVS 207 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~~~~~~~~~~~v~gvD~S~~ml~~a~~---------~~~~~~~D~~~~~~lpf~~~~FD~Vis~~~ 207 (299)
...+|||+|||+|.........+.+|+|+|+|+.|++.+++ +++++++|+ ..++ ++++||+|+++..
T Consensus 78 ~~~~vLD~gcG~G~~~~~la~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~---~~~~-~~~~~D~v~~~~~ 153 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQFALTGMRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDF---LLLA-SFLKADVVFLSPP 153 (241)
T ss_dssp CCSEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCH---HHHG-GGCCCSEEEECCC
T ss_pred CCCEEEECccccCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECCh---HHhc-ccCCCCEEEECCC
Confidence 35789999999997444333346899999999999987654 378899998 6665 5689999999999
Q ss_pred ccccCCHHHHHHHHHhhccCCcEEEEE
Q 022305 208 VDYLTKPIEVFKEMCQVLKPGGLAIVS 234 (299)
Q Consensus 208 l~~~~d~~~~l~ei~rvLkpGG~lii~ 234 (299)
++|..++...+.++.++|||||.+++.
T Consensus 154 ~~~~~~~~~~~~~~~~~L~pgG~~i~~ 180 (241)
T 3gdh_A 154 WGGPDYATAETFDIRTMMSPDGFEIFR 180 (241)
T ss_dssp CSSGGGGGSSSBCTTTSCSSCHHHHHH
T ss_pred cCCcchhhhHHHHHHhhcCCcceeHHH
Confidence 999988887889999999999987664
No 159
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.26 E-value=1.3e-12 Score=109.38 Aligned_cols=99 Identities=13% Similarity=0.023 Sum_probs=75.3
Q ss_pred cCCceeeccCcCCcccc-CCCCCCCeEEEEeCCHHHHHhcCC---------CCcEEEeccCCCCCC----CCCCCCeeEE
Q 022305 137 YYSEVFPPSNTPGVSHF-PPGYKQDRIVGMGMNEEELKRNPV---------LTEYVVQDLNLNPKL----PFEDNSFDVI 202 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~~~-~~~~~~~~v~gvD~S~~ml~~a~~---------~~~~~~~D~~~~~~l----pf~~~~FD~V 202 (299)
...+|||+|||+|.... .......+|+|+|+|+.|++.+++ +++++.+|+ .+. ++++++||+|
T Consensus 44 ~~~~vLD~GcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~---~~~~~~~~~~~~~fD~i 120 (187)
T 2fhp_A 44 DGGMALDLYSGSGGLAIEAVSRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDA---NRALEQFYEEKLQFDLV 120 (187)
T ss_dssp SSCEEEETTCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCH---HHHHHHHHHTTCCEEEE
T ss_pred CCCCEEEeCCccCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcH---HHHHHHHHhcCCCCCEE
Confidence 34689999999997433 222344799999999999987764 367888887 442 2336889999
Q ss_pred EecccccccCCHHHHHHHH--HhhccCCcEEEEEecCcc
Q 022305 203 TNVVSVDYLTKPIEVFKEM--CQVLKPGGLAIVSFSNRC 239 (299)
Q Consensus 203 is~~~l~~~~d~~~~l~ei--~rvLkpGG~lii~~~~~~ 239 (299)
++...++ ..+....++.+ .++|||||.+++..+...
T Consensus 121 ~~~~~~~-~~~~~~~~~~l~~~~~L~~gG~l~~~~~~~~ 158 (187)
T 2fhp_A 121 LLDPPYA-KQEIVSQLEKMLERQLLTNEAVIVCETDKTV 158 (187)
T ss_dssp EECCCGG-GCCHHHHHHHHHHTTCEEEEEEEEEEEETTC
T ss_pred EECCCCC-chhHHHHHHHHHHhcccCCCCEEEEEeCCcc
Confidence 9987743 45778888888 999999999999877643
No 160
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.25 E-value=2.2e-12 Score=110.58 Aligned_cols=97 Identities=8% Similarity=-0.065 Sum_probs=75.0
Q ss_pred CCceeeccCcCCccccC-CCCCCCeEEEEeCCHHHHHhcCC--------CCcEEEeccCCCCC-CCCCCCCeeEEEeccc
Q 022305 138 YSEVFPPSNTPGVSHFP-PGYKQDRIVGMGMNEEELKRNPV--------LTEYVVQDLNLNPK-LPFEDNSFDVITNVVS 207 (299)
Q Consensus 138 ~~~vLDiGcG~G~~~~~-~~~~~~~v~gvD~S~~ml~~a~~--------~~~~~~~D~~~~~~-lpf~~~~FD~Vis~~~ 207 (299)
..+|||+|||+|...+. ......+|+|+|+|+.|++.+++ +++++++|+ .+ ++..+++||+|++...
T Consensus 55 ~~~vLDlgcG~G~~~~~l~~~~~~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~---~~~~~~~~~~fD~V~~~~p 131 (202)
T 2fpo_A 55 DAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNA---MSFLAQKGTPHNIVFVDPP 131 (202)
T ss_dssp TCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCH---HHHHSSCCCCEEEEEECCS
T ss_pred CCeEEEeCCCcCHHHHHHHhcCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCH---HHHHhhcCCCCCEEEECCC
Confidence 46899999999974442 22223599999999999997764 367888887 44 5666789999999876
Q ss_pred ccccCCHHHHHHHHHh--hccCCcEEEEEecCc
Q 022305 208 VDYLTKPIEVFKEMCQ--VLKPGGLAIVSFSNR 238 (299)
Q Consensus 208 l~~~~d~~~~l~ei~r--vLkpGG~lii~~~~~ 238 (299)
+ +..+...+++++.+ +|||||.++++....
T Consensus 132 ~-~~~~~~~~l~~l~~~~~L~pgG~l~i~~~~~ 163 (202)
T 2fpo_A 132 F-RRGLLEETINLLEDNGWLADEALIYVESEVE 163 (202)
T ss_dssp S-STTTHHHHHHHHHHTTCEEEEEEEEEEEEGG
T ss_pred C-CCCcHHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 4 35678889999865 599999999987653
No 161
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.25 E-value=5.4e-13 Score=113.49 Aligned_cols=96 Identities=10% Similarity=0.072 Sum_probs=75.3
Q ss_pred hcCCceeeccCcCCccccC--CCCCCCeEEEEeCCHHHHHhcCCC-------CcEEEeccCCCCCCCCCCCCeeEEEecc
Q 022305 136 KYYSEVFPPSNTPGVSHFP--PGYKQDRIVGMGMNEEELKRNPVL-------TEYVVQDLNLNPKLPFEDNSFDVITNVV 206 (299)
Q Consensus 136 ~~~~~vLDiGcG~G~~~~~--~~~~~~~v~gvD~S~~ml~~a~~~-------~~~~~~D~~~~~~lpf~~~~FD~Vis~~ 206 (299)
....+|||+|||.|...+. ...++.+++++|+|+.|++.++++ .++...|. ... .+.++||+|++..
T Consensus 48 ~~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~~d~---~~~-~~~~~~DvVLa~k 123 (200)
T 3fzg_A 48 KHVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRFLNK---ESD-VYKGTYDVVFLLK 123 (200)
T ss_dssp CCCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCCSSEEEEECC---HHH-HTTSEEEEEEEET
T ss_pred CCCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCccEEEecc---ccc-CCCCCcChhhHhh
Confidence 3467999999999973333 334678999999999999987753 24556776 333 4568899999999
Q ss_pred cccccCCHHHHHHHHHhhccCCcEEEEEec
Q 022305 207 SVDYLTKPIEVFKEMCQVLKPGGLAIVSFS 236 (299)
Q Consensus 207 ~l~~~~d~~~~l~ei~rvLkpGG~lii~~~ 236 (299)
++|++++.+.++.++.+.|||||.+ |+++
T Consensus 124 ~LHlL~~~~~al~~v~~~L~pggvf-ISfp 152 (200)
T 3fzg_A 124 MLPVLKQQDVNILDFLQLFHTQNFV-ISFP 152 (200)
T ss_dssp CHHHHHHTTCCHHHHHHTCEEEEEE-EEEE
T ss_pred HHHhhhhhHHHHHHHHHHhCCCCEE-EEeC
Confidence 9999988888889999999999855 4555
No 162
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.25 E-value=6.9e-13 Score=116.24 Aligned_cols=98 Identities=10% Similarity=0.017 Sum_probs=74.5
Q ss_pred cCCceeeccCcCCccccCCCCCCCeEEEEeCCHHHHHhcCC---------CCcEEEeccCCCCCCCCCCCCeeEEEeccc
Q 022305 137 YYSEVFPPSNTPGVSHFPPGYKQDRIVGMGMNEEELKRNPV---------LTEYVVQDLNLNPKLPFEDNSFDVITNVVS 207 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~~~~~~~~~~~v~gvD~S~~ml~~a~~---------~~~~~~~D~~~~~~lpf~~~~FD~Vis~~~ 207 (299)
...+|||+|||+|.........+.+++++|+|+.+++.+++ ++++..+|+ .+..+++++||+|++
T Consensus 91 ~~~~vldiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~---~~~~~~~~~~D~v~~--- 164 (248)
T 2yvl_A 91 KEKRVLEFGTGSGALLAVLSEVAGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDF---KDAEVPEGIFHAAFV--- 164 (248)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHSSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCT---TTSCCCTTCBSEEEE---
T ss_pred CCCEEEEeCCCccHHHHHHHHhCCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcCh---hhcccCCCcccEEEE---
Confidence 44689999999996332221126799999999999987654 366777887 554336678999997
Q ss_pred ccccCCHHHHHHHHHhhccCCcEEEEEecCcchHH
Q 022305 208 VDYLTKPIEVFKEMCQVLKPGGLAIVSFSNRCFWT 242 (299)
Q Consensus 208 l~~~~d~~~~l~ei~rvLkpGG~lii~~~~~~~~~ 242 (299)
+.+++..+++++.++|||||.+++..++.....
T Consensus 165 --~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~ 197 (248)
T 2yvl_A 165 --DVREPWHYLEKVHKSLMEGAPVGFLLPTANQVI 197 (248)
T ss_dssp --CSSCGGGGHHHHHHHBCTTCEEEEEESSHHHHH
T ss_pred --CCcCHHHHHHHHHHHcCCCCEEEEEeCCHHHHH
Confidence 356888999999999999999999887654333
No 163
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.25 E-value=4.7e-12 Score=119.05 Aligned_cols=97 Identities=13% Similarity=0.133 Sum_probs=73.6
Q ss_pred CceeeccCcCCccc--cCCCCCCCeEEEEeCCHHHHHhcCCC-----------CcEEEeccCCCCCCCCCCCCeeEEEec
Q 022305 139 SEVFPPSNTPGVSH--FPPGYKQDRIVGMGMNEEELKRNPVL-----------TEYVVQDLNLNPKLPFEDNSFDVITNV 205 (299)
Q Consensus 139 ~~vLDiGcG~G~~~--~~~~~~~~~v~gvD~S~~ml~~a~~~-----------~~~~~~D~~~~~~lpf~~~~FD~Vis~ 205 (299)
.+|||+|||+|... +....++.+|+|+|+|+.|++.++++ ++++.+|+ .. ++++++||+|+++
T Consensus 224 ~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~---~~-~~~~~~fD~Ii~n 299 (375)
T 4dcm_A 224 GEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNA---LS-GVEPFRFNAVLCN 299 (375)
T ss_dssp SEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECST---TT-TCCTTCEEEEEEC
T ss_pred CeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechh---hc-cCCCCCeeEEEEC
Confidence 68999999999733 33344578999999999999877652 56688898 44 5677899999999
Q ss_pred ccccccCC-----HHHHHHHHHhhccCCcEEEEEecCcc
Q 022305 206 VSVDYLTK-----PIEVFKEMCQVLKPGGLAIVSFSNRC 239 (299)
Q Consensus 206 ~~l~~~~d-----~~~~l~ei~rvLkpGG~lii~~~~~~ 239 (299)
..+++... ..++++++.++|||||.+++......
T Consensus 300 ppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~n~~~ 338 (375)
T 4dcm_A 300 PPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHL 338 (375)
T ss_dssp CCC-------CCHHHHHHHHHHHHEEEEEEEEEEEETTS
T ss_pred CCcccCcccCHHHHHHHHHHHHHhCCCCcEEEEEEECCc
Confidence 88876422 24789999999999999998765433
No 164
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.25 E-value=2.1e-12 Score=111.95 Aligned_cols=97 Identities=12% Similarity=0.044 Sum_probs=74.6
Q ss_pred cCCceeeccCcCCcccc--CCCC-CCCeEEEEeCCHHHHHhcCC---------CCcEEEeccCCCCCCCCC-----CCCe
Q 022305 137 YYSEVFPPSNTPGVSHF--PPGY-KQDRIVGMGMNEEELKRNPV---------LTEYVVQDLNLNPKLPFE-----DNSF 199 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~~~--~~~~-~~~~v~gvD~S~~ml~~a~~---------~~~~~~~D~~~~~~lpf~-----~~~F 199 (299)
...+|||+|||+|...+ .... ++.+|+++|+|+.|++.+++ +++++++|+. +.++.. .++|
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~--~~l~~~~~~~~~~~f 135 (221)
T 3u81_A 58 SPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQ--DLIPQLKKKYDVDTL 135 (221)
T ss_dssp CCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHH--HHGGGTTTTSCCCCC
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHH--HHHHHHHHhcCCCce
Confidence 45789999999997333 3332 37899999999999998765 2788899872 123322 2789
Q ss_pred eEEEecccccccCCHHHHHHHHHhhccCCcEEEEEec
Q 022305 200 DVITNVVSVDYLTKPIEVFKEMCQVLKPGGLAIVSFS 236 (299)
Q Consensus 200 D~Vis~~~l~~~~d~~~~l~ei~rvLkpGG~lii~~~ 236 (299)
|+|++....++..+..++++++ ++|||||.++++..
T Consensus 136 D~V~~d~~~~~~~~~~~~~~~~-~~LkpgG~lv~~~~ 171 (221)
T 3u81_A 136 DMVFLDHWKDRYLPDTLLLEKC-GLLRKGTVLLADNV 171 (221)
T ss_dssp SEEEECSCGGGHHHHHHHHHHT-TCCCTTCEEEESCC
T ss_pred EEEEEcCCcccchHHHHHHHhc-cccCCCeEEEEeCC
Confidence 9999998888887777888888 99999999998643
No 165
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.23 E-value=2e-12 Score=111.04 Aligned_cols=93 Identities=13% Similarity=0.019 Sum_probs=71.4
Q ss_pred cCCceeeccCcCCcccc--CCCC-CCCeEEEEeCCHHHHHhcCC--------CCcEEEeccCCCCCCCCCCCCeeEEEec
Q 022305 137 YYSEVFPPSNTPGVSHF--PPGY-KQDRIVGMGMNEEELKRNPV--------LTEYVVQDLNLNPKLPFEDNSFDVITNV 205 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~~~--~~~~-~~~~v~gvD~S~~ml~~a~~--------~~~~~~~D~~~~~~lpf~~~~FD~Vis~ 205 (299)
...+|||+|||+|.... .... +..+|+|+|+|+.+++.+++ ++++..+|+ ......+++||+|++.
T Consensus 77 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~---~~~~~~~~~fD~v~~~ 153 (215)
T 2yxe_A 77 PGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDG---TLGYEPLAPYDRIYTT 153 (215)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCG---GGCCGGGCCEEEEEES
T ss_pred CCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCc---ccCCCCCCCeeEEEEC
Confidence 44689999999996322 2211 33799999999999987764 367888887 3222236789999999
Q ss_pred ccccccCCHHHHHHHHHhhccCCcEEEEEecCc
Q 022305 206 VSVDYLTKPIEVFKEMCQVLKPGGLAIVSFSNR 238 (299)
Q Consensus 206 ~~l~~~~d~~~~l~ei~rvLkpGG~lii~~~~~ 238 (299)
.+++|+. +++.++|||||.+++.+++.
T Consensus 154 ~~~~~~~------~~~~~~L~pgG~lv~~~~~~ 180 (215)
T 2yxe_A 154 AAGPKIP------EPLIRQLKDGGKLLMPVGRY 180 (215)
T ss_dssp SBBSSCC------HHHHHTEEEEEEEEEEESSS
T ss_pred CchHHHH------HHHHHHcCCCcEEEEEECCC
Confidence 9999987 48999999999999987754
No 166
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.22 E-value=3.6e-12 Score=111.49 Aligned_cols=93 Identities=15% Similarity=0.180 Sum_probs=73.6
Q ss_pred cCCceeeccCcCCccc--cCCCCCCCeEEEEeCCHHHHHhcCC---------CCcEEEeccCCCCCCC-CCCCCeeEEEe
Q 022305 137 YYSEVFPPSNTPGVSH--FPPGYKQDRIVGMGMNEEELKRNPV---------LTEYVVQDLNLNPKLP-FEDNSFDVITN 204 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~~--~~~~~~~~~v~gvD~S~~ml~~a~~---------~~~~~~~D~~~~~~lp-f~~~~FD~Vis 204 (299)
...+|||+|||+|... +....++.+|+|+|+|+.|++.+++ +++++.+|+. +.++ ..+++||+|++
T Consensus 71 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~--~~~~~~~~~~fD~V~~ 148 (232)
T 3ntv_A 71 NVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNAL--EQFENVNDKVYDMIFI 148 (232)
T ss_dssp TCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGG--GCHHHHTTSCEEEEEE
T ss_pred CCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHH--HHHHhhccCCccEEEE
Confidence 4579999999999733 3334467899999999999987754 4788999983 2234 44789999997
Q ss_pred cccccccCCHHHHHHHHHhhccCCcEEEEE
Q 022305 205 VVSVDYLTKPIEVFKEMCQVLKPGGLAIVS 234 (299)
Q Consensus 205 ~~~l~~~~d~~~~l~ei~rvLkpGG~lii~ 234 (299)
.. ...+...+++++.++|||||.+++.
T Consensus 149 ~~---~~~~~~~~l~~~~~~LkpgG~lv~d 175 (232)
T 3ntv_A 149 DA---AKAQSKKFFEIYTPLLKHQGLVITD 175 (232)
T ss_dssp ET---TSSSHHHHHHHHGGGEEEEEEEEEE
T ss_pred cC---cHHHHHHHHHHHHHhcCCCeEEEEe
Confidence 64 3557788999999999999999885
No 167
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.22 E-value=3.4e-12 Score=112.36 Aligned_cols=93 Identities=10% Similarity=-0.023 Sum_probs=73.0
Q ss_pred CCceeeccCcCCccccC--CC----CCCCeEEEEeCCHHHHHhcCC---CCcEEEeccCCCCC---CCCCC-CCeeEEEe
Q 022305 138 YSEVFPPSNTPGVSHFP--PG----YKQDRIVGMGMNEEELKRNPV---LTEYVVQDLNLNPK---LPFED-NSFDVITN 204 (299)
Q Consensus 138 ~~~vLDiGcG~G~~~~~--~~----~~~~~v~gvD~S~~ml~~a~~---~~~~~~~D~~~~~~---lpf~~-~~FD~Vis 204 (299)
..+|||+|||+|..... .. .++++|+|+|+|+.|++.|+. +++++++|+ .. +++.+ .+||+|++
T Consensus 82 ~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~~~~~v~~~~gD~---~~~~~l~~~~~~~fD~I~~ 158 (236)
T 2bm8_A 82 PRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPASDMENITLHQGDC---SDLTTFEHLREMAHPLIFI 158 (236)
T ss_dssp CSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGGGCTTEEEEECCS---SCSGGGGGGSSSCSSEEEE
T ss_pred CCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhccCCceEEEECcc---hhHHHHHhhccCCCCEEEE
Confidence 46899999999973332 22 357899999999999988753 488999999 55 35434 47999998
Q ss_pred cccccccCCHHHHHHHHHh-hccCCcEEEEEec
Q 022305 205 VVSVDYLTKPIEVFKEMCQ-VLKPGGLAIVSFS 236 (299)
Q Consensus 205 ~~~l~~~~d~~~~l~ei~r-vLkpGG~lii~~~ 236 (299)
... | .+...+|+++.| +|||||.++++..
T Consensus 159 d~~--~-~~~~~~l~~~~r~~LkpGG~lv~~d~ 188 (236)
T 2bm8_A 159 DNA--H-ANTFNIMKWAVDHLLEEGDYFIIEDM 188 (236)
T ss_dssp ESS--C-SSHHHHHHHHHHHTCCTTCEEEECSC
T ss_pred CCc--h-HhHHHHHHHHHHhhCCCCCEEEEEeC
Confidence 654 4 378899999998 9999999999643
No 168
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.22 E-value=1.4e-12 Score=108.65 Aligned_cols=99 Identities=7% Similarity=-0.005 Sum_probs=73.4
Q ss_pred cCCceeeccCcCCccccCC-CCCCCeEEEEeCCHHHHHhcCC---------CCcEEEeccCCCCC-CCCCCCCeeEEEec
Q 022305 137 YYSEVFPPSNTPGVSHFPP-GYKQDRIVGMGMNEEELKRNPV---------LTEYVVQDLNLNPK-LPFEDNSFDVITNV 205 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~~~~~-~~~~~~v~gvD~S~~ml~~a~~---------~~~~~~~D~~~~~~-lpf~~~~FD~Vis~ 205 (299)
...+|||+|||+|...... ..+..+|+|+|+|+.|++.+++ +++++.+|+ .+ ++..+++||+|++.
T Consensus 31 ~~~~vLDlGcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~---~~~~~~~~~~fD~i~~~ 107 (177)
T 2esr_A 31 NGGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEA---ERAIDCLTGRFDLVFLD 107 (177)
T ss_dssp CSCEEEEETCTTCHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCH---HHHHHHBCSCEEEEEEC
T ss_pred CCCeEEEeCCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcH---HHhHHhhcCCCCEEEEC
Confidence 3468999999999733322 2234799999999999987754 267888887 44 44445679999998
Q ss_pred ccccccCCHHHHHHHHH--hhccCCcEEEEEecCcc
Q 022305 206 VSVDYLTKPIEVFKEMC--QVLKPGGLAIVSFSNRC 239 (299)
Q Consensus 206 ~~l~~~~d~~~~l~ei~--rvLkpGG~lii~~~~~~ 239 (299)
..++ ..+..+.++.+. ++|||||.++++.....
T Consensus 108 ~~~~-~~~~~~~~~~l~~~~~L~~gG~l~~~~~~~~ 142 (177)
T 2esr_A 108 PPYA-KETIVATIEALAAKNLLSEQVMVVCETDKTV 142 (177)
T ss_dssp CSSH-HHHHHHHHHHHHHTTCEEEEEEEEEEEETTC
T ss_pred CCCC-cchHHHHHHHHHhCCCcCCCcEEEEEECCcc
Confidence 6653 245667777777 99999999999876643
No 169
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.21 E-value=8.7e-12 Score=114.96 Aligned_cols=93 Identities=14% Similarity=0.097 Sum_probs=72.8
Q ss_pred cCCceeeccCcCCccccCC-CCCCCeEEEEeCCHHHHHhcCC---------CCcEEEeccCCCCCCCCCCCCeeEEEecc
Q 022305 137 YYSEVFPPSNTPGVSHFPP-GYKQDRIVGMGMNEEELKRNPV---------LTEYVVQDLNLNPKLPFEDNSFDVITNVV 206 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~~~~~-~~~~~~v~gvD~S~~ml~~a~~---------~~~~~~~D~~~~~~lpf~~~~FD~Vis~~ 206 (299)
...+|||+|||+|...... .....+|+|+|+| .|++.+++ +++++.+|+ +++++++++||+|++..
T Consensus 38 ~~~~VLDiGcGtG~ls~~la~~g~~~v~~vD~s-~~~~~a~~~~~~~~~~~~i~~~~~d~---~~~~~~~~~~D~Ivs~~ 113 (328)
T 1g6q_1 38 KDKIVLDVGCGTGILSMFAAKHGAKHVIGVDMS-SIIEMAKELVELNGFSDKITLLRGKL---EDVHLPFPKVDIIISEW 113 (328)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTCCSEEEEEESS-THHHHHHHHHHHTTCTTTEEEEESCT---TTSCCSSSCEEEEEECC
T ss_pred CCCEEEEecCccHHHHHHHHHCCCCEEEEEChH-HHHHHHHHHHHHcCCCCCEEEEECch---hhccCCCCcccEEEEeC
Confidence 3468999999999633222 2233599999999 58876554 378899999 78888888999999874
Q ss_pred ---cccccCCHHHHHHHHHhhccCCcEEEE
Q 022305 207 ---SVDYLTKPIEVFKEMCQVLKPGGLAIV 233 (299)
Q Consensus 207 ---~l~~~~d~~~~l~ei~rvLkpGG~lii 233 (299)
.+.+..++..++.++.++|||||.++.
T Consensus 114 ~~~~l~~~~~~~~~l~~~~~~LkpgG~li~ 143 (328)
T 1g6q_1 114 MGYFLLYESMMDTVLYARDHYLVEGGLIFP 143 (328)
T ss_dssp CBTTBSTTCCHHHHHHHHHHHEEEEEEEES
T ss_pred chhhcccHHHHHHHHHHHHhhcCCCeEEEE
Confidence 344556789999999999999999874
No 170
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.21 E-value=2.7e-12 Score=120.65 Aligned_cols=92 Identities=15% Similarity=0.146 Sum_probs=72.8
Q ss_pred CCceeeccCcCCccccCCCCCC-CeEEEEeCCHHHHHhcCCC---------CcEEEeccCCCCCCCCCCCCeeEEEeccc
Q 022305 138 YSEVFPPSNTPGVSHFPPGYKQ-DRIVGMGMNEEELKRNPVL---------TEYVVQDLNLNPKLPFEDNSFDVITNVVS 207 (299)
Q Consensus 138 ~~~vLDiGcG~G~~~~~~~~~~-~~v~gvD~S~~ml~~a~~~---------~~~~~~D~~~~~~lpf~~~~FD~Vis~~~ 207 (299)
..+|||+|||+|...+.....+ .+|+|+|+| .|++.++++ ++++++|+ ++++++ ++||+|++..+
T Consensus 64 ~~~VLDlGcGtG~ls~~la~~g~~~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~---~~~~~~-~~~D~Iv~~~~ 138 (376)
T 3r0q_C 64 GKTVLDVGTGSGILAIWSAQAGARKVYAVEAT-KMADHARALVKANNLDHIVEVIEGSV---EDISLP-EKVDVIISEWM 138 (376)
T ss_dssp TCEEEEESCTTTHHHHHHHHTTCSEEEEEESS-TTHHHHHHHHHHTTCTTTEEEEESCG---GGCCCS-SCEEEEEECCC
T ss_pred CCEEEEeccCcCHHHHHHHhcCCCEEEEEccH-HHHHHHHHHHHHcCCCCeEEEEECch---hhcCcC-CcceEEEEcCh
Confidence 4689999999997333222223 499999999 999876542 68999999 778776 88999999765
Q ss_pred cccc---CCHHHHHHHHHhhccCCcEEEEE
Q 022305 208 VDYL---TKPIEVFKEMCQVLKPGGLAIVS 234 (299)
Q Consensus 208 l~~~---~d~~~~l~ei~rvLkpGG~lii~ 234 (299)
.+++ .++..+++++.++|||||.++++
T Consensus 139 ~~~l~~e~~~~~~l~~~~~~LkpgG~li~~ 168 (376)
T 3r0q_C 139 GYFLLRESMFDSVISARDRWLKPTGVMYPS 168 (376)
T ss_dssp BTTBTTTCTHHHHHHHHHHHEEEEEEEESS
T ss_pred hhcccchHHHHHHHHHHHhhCCCCeEEEEe
Confidence 5554 56889999999999999999774
No 171
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.21 E-value=1.1e-11 Score=109.26 Aligned_cols=100 Identities=17% Similarity=0.189 Sum_probs=72.6
Q ss_pred CCceeeccCcCCcccc--CCCCCCCeEEEEeCCHHHHHhcC----------------CCCcEEEeccCCCCC-CC--CCC
Q 022305 138 YSEVFPPSNTPGVSHF--PPGYKQDRIVGMGMNEEELKRNP----------------VLTEYVVQDLNLNPK-LP--FED 196 (299)
Q Consensus 138 ~~~vLDiGcG~G~~~~--~~~~~~~~v~gvD~S~~ml~~a~----------------~~~~~~~~D~~~~~~-lp--f~~ 196 (299)
..+|||+|||+|...+ ....+..+++|+|+|+.|++.++ .+++++.+|+ .. ++ +++
T Consensus 50 ~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~---~~~l~~~~~~ 126 (246)
T 2vdv_E 50 KVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNA---MKFLPNFFEK 126 (246)
T ss_dssp CEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCT---TSCGGGTSCT
T ss_pred CCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccH---HHHHHHhccc
Confidence 3579999999997333 33335679999999999997552 2478899998 54 66 778
Q ss_pred CCeeEEEecccccccCC--------HHHHHHHHHhhccCCcEEEEEecCcch
Q 022305 197 NSFDVITNVVSVDYLTK--------PIEVFKEMCQVLKPGGLAIVSFSNRCF 240 (299)
Q Consensus 197 ~~FD~Vis~~~l~~~~d--------~~~~l~ei~rvLkpGG~lii~~~~~~~ 240 (299)
+++|.|+....-.+... ...+++++.++|||||.+++.+....+
T Consensus 127 ~~~d~v~~~~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~td~~~~ 178 (246)
T 2vdv_E 127 GQLSKMFFCFPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTITDVKDL 178 (246)
T ss_dssp TCEEEEEEESCCCC------CSSCCCHHHHHHHHHHEEEEEEEEEEESCHHH
T ss_pred cccCEEEEECCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEeccHHH
Confidence 99999985432221110 048999999999999999997766443
No 172
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.20 E-value=3.3e-12 Score=112.77 Aligned_cols=94 Identities=10% Similarity=0.055 Sum_probs=70.4
Q ss_pred CCceeeccCcCCccccCC--C--CCCCeEEEEeCCHHHHHhcCCC-----------------------------------
Q 022305 138 YSEVFPPSNTPGVSHFPP--G--YKQDRIVGMGMNEEELKRNPVL----------------------------------- 178 (299)
Q Consensus 138 ~~~vLDiGcG~G~~~~~~--~--~~~~~v~gvD~S~~ml~~a~~~----------------------------------- 178 (299)
..+|||+|||+|...+.. . .++.+|+|+|+|+.|++.|+++
T Consensus 52 ~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (250)
T 1o9g_A 52 PVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSERFGKPSYLEAAQAA 131 (250)
T ss_dssp CEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
T ss_pred CCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhhcccccchhhhhhh
Confidence 358999999999733322 1 2357899999999999877631
Q ss_pred --Cc-------------EEEeccCCCCCCCC-----CCCCeeEEEecccccccCC---------HHHHHHHHHhhccCCc
Q 022305 179 --TE-------------YVVQDLNLNPKLPF-----EDNSFDVITNVVSVDYLTK---------PIEVFKEMCQVLKPGG 229 (299)
Q Consensus 179 --~~-------------~~~~D~~~~~~lpf-----~~~~FD~Vis~~~l~~~~d---------~~~~l~ei~rvLkpGG 229 (299)
++ ++++|+ ..... ..++||+|+|+..+.+..+ ...+++++.++|||||
T Consensus 132 ~~v~~~~~~~~~~~~~~~~~~D~---~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG 208 (250)
T 1o9g_A 132 RRLRERLTAEGGALPCAIRTADV---FDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALPAHA 208 (250)
T ss_dssp HHHHHHHHHTTSSCCEEEEECCT---TCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSCTTC
T ss_pred hhhhhhccccccccccceeeccc---ccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcCCCc
Confidence 44 888998 44321 4458999999876655543 4589999999999999
Q ss_pred EEEEE
Q 022305 230 LAIVS 234 (299)
Q Consensus 230 ~lii~ 234 (299)
.+++.
T Consensus 209 ~l~~~ 213 (250)
T 1o9g_A 209 VIAVT 213 (250)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 99884
No 173
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.19 E-value=9.3e-13 Score=130.20 Aligned_cols=97 Identities=15% Similarity=0.216 Sum_probs=77.2
Q ss_pred cCCceeeccCcCCccccCCCCCCCeEEEEeCCHHHHHhcCC--------CCcEEEeccCCCCCC--CCCCCCeeEEEecc
Q 022305 137 YYSEVFPPSNTPGVSHFPPGYKQDRIVGMGMNEEELKRNPV--------LTEYVVQDLNLNPKL--PFEDNSFDVITNVV 206 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~~~~~~~~~~~v~gvD~S~~ml~~a~~--------~~~~~~~D~~~~~~l--pf~~~~FD~Vis~~ 206 (299)
...+|||+|||+|......+..+++|+|||+|+.+|+.|+. +++|.++++ +++ ++++++||+|+|+.
T Consensus 66 ~~~~vLDvGCG~G~~~~~la~~ga~V~giD~~~~~i~~a~~~a~~~~~~~~~~~~~~~---~~~~~~~~~~~fD~v~~~e 142 (569)
T 4azs_A 66 RPLNVLDLGCAQGFFSLSLASKGATIVGIDFQQENINVCRALAEENPDFAAEFRVGRI---EEVIAALEEGEFDLAIGLS 142 (569)
T ss_dssp SCCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTSTTSEEEEEECCH---HHHHHHCCTTSCSEEEEES
T ss_pred CCCeEEEECCCCcHHHHHHHhCCCEEEEECCCHHHHHHHHHHHHhcCCCceEEEECCH---HHHhhhccCCCccEEEECc
Confidence 34589999999997555555568999999999999987653 278999998 777 56788999999999
Q ss_pred cccccCCHHH--HHHHHHhhccCCcE-EEEEec
Q 022305 207 SVDYLTKPIE--VFKEMCQVLKPGGL-AIVSFS 236 (299)
Q Consensus 207 ~l~~~~d~~~--~l~ei~rvLkpGG~-lii~~~ 236 (299)
++||++|+.. .+..+.+.|+++|. +++.+.
T Consensus 143 ~~ehv~~~~~~~~~~~~~~tl~~~~~~~~~~~~ 175 (569)
T 4azs_A 143 VFHHIVHLHGIDEVKRLLSRLADVTQAVILELA 175 (569)
T ss_dssp CHHHHHHHHCHHHHHHHHHHHHHHSSEEEEECC
T ss_pred chhcCCCHHHHHHHHHHHHHhccccceeeEEec
Confidence 9999998863 35577888888884 444443
No 174
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.19 E-value=2.8e-12 Score=117.56 Aligned_cols=92 Identities=20% Similarity=0.092 Sum_probs=72.5
Q ss_pred cCCceeeccCcCCccccC--CCCC-CCeEEEEeCCHHHHHhcCC--------CCcEEEeccCCCCCCCCCCCCeeEEEec
Q 022305 137 YYSEVFPPSNTPGVSHFP--PGYK-QDRIVGMGMNEEELKRNPV--------LTEYVVQDLNLNPKLPFEDNSFDVITNV 205 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~~~~--~~~~-~~~v~gvD~S~~ml~~a~~--------~~~~~~~D~~~~~~lpf~~~~FD~Vis~ 205 (299)
...+|||+|||+|..... .... ..+|+|+|+|++|++.+++ +++++.+|. ...+.++++||+|++.
T Consensus 75 ~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~---~~~~~~~~~fD~Iv~~ 151 (317)
T 1dl5_A 75 KGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDG---YYGVPEFSPYDVIFVT 151 (317)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCG---GGCCGGGCCEEEEEEC
T ss_pred CcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECCh---hhccccCCCeEEEEEc
Confidence 456899999999963222 2222 3679999999999987764 277888998 5555456889999999
Q ss_pred ccccccCCHHHHHHHHHhhccCCcEEEEEecC
Q 022305 206 VSVDYLTKPIEVFKEMCQVLKPGGLAIVSFSN 237 (299)
Q Consensus 206 ~~l~~~~d~~~~l~ei~rvLkpGG~lii~~~~ 237 (299)
.+++|+. +++.++|||||.+++.+..
T Consensus 152 ~~~~~~~------~~~~~~LkpgG~lvi~~~~ 177 (317)
T 1dl5_A 152 VGVDEVP------ETWFTQLKEGGRVIVPINL 177 (317)
T ss_dssp SBBSCCC------HHHHHHEEEEEEEEEEBCB
T ss_pred CCHHHHH------HHHHHhcCCCcEEEEEECC
Confidence 9999987 5789999999999998654
No 175
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.18 E-value=1.1e-11 Score=111.16 Aligned_cols=93 Identities=12% Similarity=-0.026 Sum_probs=67.4
Q ss_pred cCCceeeccCcCCccccCCCCCCCeEEEEeCCHHHHHhcCC----------CCcEE--EeccCCCCCCCCCCCCeeEEEe
Q 022305 137 YYSEVFPPSNTPGVSHFPPGYKQDRIVGMGMNEEELKRNPV----------LTEYV--VQDLNLNPKLPFEDNSFDVITN 204 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~~~~~~~~~~~v~gvD~S~~ml~~a~~----------~~~~~--~~D~~~~~~lpf~~~~FD~Vis 204 (299)
...+|||+|||+|......... .+|+|||+++ |+..+.+ ++.++ ++|+ ..++ +++||+|+|
T Consensus 74 ~g~~VLDlGcGtG~~s~~la~~-~~V~gvD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~---~~l~--~~~fD~V~s 146 (265)
T 2oxt_A 74 LTGRVVDLGCGRGGWSYYAASR-PHVMDVRAYT-LGVGGHEVPRITESYGWNIVKFKSRVDI---HTLP--VERTDVIMC 146 (265)
T ss_dssp CCEEEEEESCTTSHHHHHHHTS-TTEEEEEEEC-CCCSSCCCCCCCCBTTGGGEEEECSCCT---TTSC--CCCCSEEEE
T ss_pred CCCEEEEeCcCCCHHHHHHHHc-CcEEEEECch-hhhhhhhhhhhhhccCCCeEEEecccCH---hHCC--CCCCcEEEE
Confidence 3468999999999632222112 7899999999 6443321 36778 7888 6665 789999999
Q ss_pred cccccccCCH----H---HHHHHHHhhccCCc--EEEEEecC
Q 022305 205 VVSVDYLTKP----I---EVFKEMCQVLKPGG--LAIVSFSN 237 (299)
Q Consensus 205 ~~~l~~~~d~----~---~~l~ei~rvLkpGG--~lii~~~~ 237 (299)
..+ ++..++ . .+|+++.++||||| .|++.+..
T Consensus 147 d~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~~ 187 (265)
T 2oxt_A 147 DVG-ESSPKWSVESERTIKILELLEKWKVKNPSADFVVKVLC 187 (265)
T ss_dssp CCC-CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEESC
T ss_pred eCc-ccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEeCC
Confidence 877 554432 1 38999999999999 99997654
No 176
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.17 E-value=5.6e-11 Score=101.25 Aligned_cols=94 Identities=14% Similarity=0.108 Sum_probs=66.2
Q ss_pred cCCceeeccCcCCccccCCCCCCCeEEEEeCCHHHHHhcCCCCcEEEeccCCCCCCCC--------C---CCCeeEEEec
Q 022305 137 YYSEVFPPSNTPGVSHFPPGYKQDRIVGMGMNEEELKRNPVLTEYVVQDLNLNPKLPF--------E---DNSFDVITNV 205 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~~~~~~~~~~~v~gvD~S~~ml~~a~~~~~~~~~D~~~~~~lpf--------~---~~~FD~Vis~ 205 (299)
...+|||+|||+|.........+.+|+|+|+++.. ...+++++++|+ .+.+. . .++||+|+|.
T Consensus 25 ~g~~VLDlG~G~G~~s~~la~~~~~V~gvD~~~~~---~~~~v~~~~~D~---~~~~~~~~~~~~~~~~~~~~~D~Vlsd 98 (191)
T 3dou_A 25 KGDAVIEIGSSPGGWTQVLNSLARKIISIDLQEME---EIAGVRFIRCDI---FKETIFDDIDRALREEGIEKVDDVVSD 98 (191)
T ss_dssp TTCEEEEESCTTCHHHHHHTTTCSEEEEEESSCCC---CCTTCEEEECCT---TSSSHHHHHHHHHHHHTCSSEEEEEEC
T ss_pred CCCEEEEEeecCCHHHHHHHHcCCcEEEEeccccc---cCCCeEEEEccc---cCHHHHHHHHHHhhcccCCcceEEecC
Confidence 44689999999996333222237899999999852 223689999999 55442 1 1489999996
Q ss_pred cccccc----C-------CHHHHHHHHHhhccCCcEEEEEec
Q 022305 206 VSVDYL----T-------KPIEVFKEMCQVLKPGGLAIVSFS 236 (299)
Q Consensus 206 ~~l~~~----~-------d~~~~l~ei~rvLkpGG~lii~~~ 236 (299)
...... . ....+++++.++|||||.|++.+.
T Consensus 99 ~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~ 140 (191)
T 3dou_A 99 AMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQF 140 (191)
T ss_dssp CCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEc
Confidence 533211 1 135788999999999999988654
No 177
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.17 E-value=1.2e-11 Score=109.50 Aligned_cols=93 Identities=11% Similarity=0.034 Sum_probs=72.2
Q ss_pred cCCceeeccCcCCcc--ccCCCCC-CCeEEEEeCCHHHHHhcCC---------CCcEEEeccCCCCC-CCCC--CCCeeE
Q 022305 137 YYSEVFPPSNTPGVS--HFPPGYK-QDRIVGMGMNEEELKRNPV---------LTEYVVQDLNLNPK-LPFE--DNSFDV 201 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~--~~~~~~~-~~~v~gvD~S~~ml~~a~~---------~~~~~~~D~~~~~~-lpf~--~~~FD~ 201 (299)
...+|||+|||+|.. .++...+ +.+|+|+|+|+.+++.+++ +++++++|+ .+ ++.. .++||+
T Consensus 63 ~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~---~~~l~~~~~~~~fD~ 139 (248)
T 3tfw_A 63 QAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPA---LQSLESLGECPAFDL 139 (248)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCH---HHHHHTCCSCCCCSE
T ss_pred CCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCH---HHHHHhcCCCCCeEE
Confidence 457999999999963 3344444 7899999999999987654 377889987 33 3332 348999
Q ss_pred EEecccccccCCHHHHHHHHHhhccCCcEEEEEe
Q 022305 202 ITNVVSVDYLTKPIEVFKEMCQVLKPGGLAIVSF 235 (299)
Q Consensus 202 Vis~~~l~~~~d~~~~l~ei~rvLkpGG~lii~~ 235 (299)
|++.. ...+...+++++.++|||||.++++.
T Consensus 140 V~~d~---~~~~~~~~l~~~~~~LkpGG~lv~~~ 170 (248)
T 3tfw_A 140 IFIDA---DKPNNPHYLRWALRYSRPGTLIIGDN 170 (248)
T ss_dssp EEECS---CGGGHHHHHHHHHHTCCTTCEEEEEC
T ss_pred EEECC---chHHHHHHHHHHHHhcCCCeEEEEeC
Confidence 99865 34567889999999999999998864
No 178
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.16 E-value=8.1e-12 Score=109.22 Aligned_cols=99 Identities=14% Similarity=0.112 Sum_probs=72.9
Q ss_pred HHHHhh-hcCCceeeccCcCCccccC--CCCCCCeEEEEeCCHHHHHhcCC--------CCcEEEeccCCCCCCCCCCC-
Q 022305 130 AIAALT-KYYSEVFPPSNTPGVSHFP--PGYKQDRIVGMGMNEEELKRNPV--------LTEYVVQDLNLNPKLPFEDN- 197 (299)
Q Consensus 130 ~~~~l~-~~~~~vLDiGcG~G~~~~~--~~~~~~~v~gvD~S~~ml~~a~~--------~~~~~~~D~~~~~~lpf~~~- 197 (299)
+++.+. ....+|||+|||+|..... ...+ .+|+|+|+|+.+++.+++ +++++.+|. ..+++++
T Consensus 83 ~~~~l~~~~~~~vLdiG~G~G~~~~~la~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~----~~~~~~~~ 157 (235)
T 1jg1_A 83 MLEIANLKPGMNILEVGTGSGWNAALISEIVK-TDVYTIERIPELVEFAKRNLERAGVKNVHVILGDG----SKGFPPKA 157 (235)
T ss_dssp HHHHHTCCTTCCEEEECCTTSHHHHHHHHHHC-SCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCG----GGCCGGGC
T ss_pred HHHhcCCCCCCEEEEEeCCcCHHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECCc----ccCCCCCC
Confidence 344442 3446899999999963322 2222 789999999999987765 267778886 2344443
Q ss_pred CeeEEEecccccccCCHHHHHHHHHhhccCCcEEEEEecCcc
Q 022305 198 SFDVITNVVSVDYLTKPIEVFKEMCQVLKPGGLAIVSFSNRC 239 (299)
Q Consensus 198 ~FD~Vis~~~l~~~~d~~~~l~ei~rvLkpGG~lii~~~~~~ 239 (299)
.||+|++..+++++. .++.++|||||.+++.+++..
T Consensus 158 ~fD~Ii~~~~~~~~~------~~~~~~L~pgG~lvi~~~~~~ 193 (235)
T 1jg1_A 158 PYDVIIVTAGAPKIP------EPLIEQLKIGGKLIIPVGSYH 193 (235)
T ss_dssp CEEEEEECSBBSSCC------HHHHHTEEEEEEEEEEECSSS
T ss_pred CccEEEECCcHHHHH------HHHHHhcCCCcEEEEEEecCC
Confidence 599999999999886 378999999999999987643
No 179
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.15 E-value=1.2e-11 Score=106.02 Aligned_cols=92 Identities=16% Similarity=0.177 Sum_probs=71.7
Q ss_pred cCCceeeccCcCCcc--ccCCCCC-CCeEEEEeCCHHHHHhcCC---------CCcEEEeccCCCCC-CCCCCCCeeEEE
Q 022305 137 YYSEVFPPSNTPGVS--HFPPGYK-QDRIVGMGMNEEELKRNPV---------LTEYVVQDLNLNPK-LPFEDNSFDVIT 203 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~--~~~~~~~-~~~v~gvD~S~~ml~~a~~---------~~~~~~~D~~~~~~-lpf~~~~FD~Vi 203 (299)
...+|||+|||+|.. .+....+ +.+|+++|+|+.|++.+++ +++++.+|. .. ++..++ ||+|+
T Consensus 56 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~---~~~~~~~~~-fD~v~ 131 (210)
T 3c3p_A 56 QPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDP---LGIAAGQRD-IDILF 131 (210)
T ss_dssp CCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCH---HHHHTTCCS-EEEEE
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecH---HHHhccCCC-CCEEE
Confidence 346899999999963 3333334 6899999999999987764 267888887 43 354456 99999
Q ss_pred ecccccccCCHHHHHHHHHhhccCCcEEEEEe
Q 022305 204 NVVSVDYLTKPIEVFKEMCQVLKPGGLAIVSF 235 (299)
Q Consensus 204 s~~~l~~~~d~~~~l~ei~rvLkpGG~lii~~ 235 (299)
+.. ...+...+++++.++|||||.+++..
T Consensus 132 ~~~---~~~~~~~~l~~~~~~LkpgG~lv~~~ 160 (210)
T 3c3p_A 132 MDC---DVFNGADVLERMNRCLAKNALLIAVN 160 (210)
T ss_dssp EET---TTSCHHHHHHHHGGGEEEEEEEEEES
T ss_pred EcC---ChhhhHHHHHHHHHhcCCCeEEEEEC
Confidence 873 34678899999999999999998863
No 180
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.15 E-value=1.1e-11 Score=107.42 Aligned_cols=92 Identities=16% Similarity=0.184 Sum_probs=71.5
Q ss_pred cCCceeeccCcCCcccc--CCCC-CCCeEEEEeCCHHHHHhcCC-------------CCcEEEeccCCCCCCCCCCCCee
Q 022305 137 YYSEVFPPSNTPGVSHF--PPGY-KQDRIVGMGMNEEELKRNPV-------------LTEYVVQDLNLNPKLPFEDNSFD 200 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~~~--~~~~-~~~~v~gvD~S~~ml~~a~~-------------~~~~~~~D~~~~~~lpf~~~~FD 200 (299)
...+|||+|||+|.... .... +..+|+|+|+|+.+++.+++ +++++.+|+ ...+..+++||
T Consensus 77 ~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~---~~~~~~~~~fD 153 (226)
T 1i1n_A 77 EGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDG---RMGYAEEAPYD 153 (226)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCG---GGCCGGGCCEE
T ss_pred CCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCc---ccCcccCCCcC
Confidence 45689999999996322 2221 34699999999999987642 467888898 55555577899
Q ss_pred EEEecccccccCCHHHHHHHHHhhccCCcEEEEEecC
Q 022305 201 VITNVVSVDYLTKPIEVFKEMCQVLKPGGLAIVSFSN 237 (299)
Q Consensus 201 ~Vis~~~l~~~~d~~~~l~ei~rvLkpGG~lii~~~~ 237 (299)
+|++...++++. +++.++|||||.+++.+..
T Consensus 154 ~i~~~~~~~~~~------~~~~~~LkpgG~lv~~~~~ 184 (226)
T 1i1n_A 154 AIHVGAAAPVVP------QALIDQLKPGGRLILPVGP 184 (226)
T ss_dssp EEEECSBBSSCC------HHHHHTEEEEEEEEEEESC
T ss_pred EEEECCchHHHH------HHHHHhcCCCcEEEEEEec
Confidence 999999887764 6889999999999998764
No 181
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.15 E-value=2.6e-11 Score=102.33 Aligned_cols=96 Identities=13% Similarity=0.102 Sum_probs=67.6
Q ss_pred cCCceeeccCcCCccc--cCCCCCC---------CeEEEEeCCHHHHHhcCCCCcEE-EeccCCCCCCC--------CCC
Q 022305 137 YYSEVFPPSNTPGVSH--FPPGYKQ---------DRIVGMGMNEEELKRNPVLTEYV-VQDLNLNPKLP--------FED 196 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~~--~~~~~~~---------~~v~gvD~S~~ml~~a~~~~~~~-~~D~~~~~~lp--------f~~ 196 (299)
...+|||+|||+|... +....+. .+|+|+|+|+.+ ...+++++ .+|+ ...+ +++
T Consensus 22 ~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~---~~~~~~~~~~~d~---~~~~~~~~~~~~~~~ 95 (196)
T 2nyu_A 22 PGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF---PLEGATFLCPADV---TDPRTSQRILEVLPG 95 (196)
T ss_dssp TTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC---CCTTCEEECSCCT---TSHHHHHHHHHHSGG
T ss_pred CCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc---cCCCCeEEEeccC---CCHHHHHHHHHhcCC
Confidence 3468999999999622 2222222 789999999943 12357788 8887 4432 345
Q ss_pred CCeeEEEecccccc----cCCH-------HHHHHHHHhhccCCcEEEEEecCc
Q 022305 197 NSFDVITNVVSVDY----LTKP-------IEVFKEMCQVLKPGGLAIVSFSNR 238 (299)
Q Consensus 197 ~~FD~Vis~~~l~~----~~d~-------~~~l~ei~rvLkpGG~lii~~~~~ 238 (299)
++||+|+|..++++ ..+. ..+++++.++|||||.+++.+...
T Consensus 96 ~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 148 (196)
T 2nyu_A 96 RRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWAG 148 (196)
T ss_dssp GCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCS
T ss_pred CCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCC
Confidence 78999999665443 3333 488999999999999999976543
No 182
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.15 E-value=7.6e-12 Score=108.45 Aligned_cols=100 Identities=15% Similarity=0.135 Sum_probs=74.6
Q ss_pred HHHHHhh---hcCCceeeccCcCCcccc--CCCC-----CCCeEEEEeCCHHHHHhcCC-------------CCcEEEec
Q 022305 129 PAIAALT---KYYSEVFPPSNTPGVSHF--PPGY-----KQDRIVGMGMNEEELKRNPV-------------LTEYVVQD 185 (299)
Q Consensus 129 ~~~~~l~---~~~~~vLDiGcG~G~~~~--~~~~-----~~~~v~gvD~S~~ml~~a~~-------------~~~~~~~D 185 (299)
.+++.+. +...+|||+|||+|.... .... +..+|+|+|+|+.+++.+++ +++++.+|
T Consensus 69 ~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d 148 (227)
T 2pbf_A 69 LSLKRLINVLKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKN 148 (227)
T ss_dssp HHHHHHTTTSCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECC
T ss_pred HHHHHHHhhCCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECC
Confidence 3445442 344689999999996222 2111 34699999999999987643 36788889
Q ss_pred cCCCCCCC----CCCCCeeEEEecccccccCCHHHHHHHHHhhccCCcEEEEEecC
Q 022305 186 LNLNPKLP----FEDNSFDVITNVVSVDYLTKPIEVFKEMCQVLKPGGLAIVSFSN 237 (299)
Q Consensus 186 ~~~~~~lp----f~~~~FD~Vis~~~l~~~~d~~~~l~ei~rvLkpGG~lii~~~~ 237 (299)
+ .... ..+++||+|++...++++ ++++.++|||||.+++.++.
T Consensus 149 ~---~~~~~~~~~~~~~fD~I~~~~~~~~~------~~~~~~~LkpgG~lv~~~~~ 195 (227)
T 2pbf_A 149 I---YQVNEEEKKELGLFDAIHVGASASEL------PEILVDLLAENGKLIIPIEE 195 (227)
T ss_dssp G---GGCCHHHHHHHCCEEEEEECSBBSSC------CHHHHHHEEEEEEEEEEEEE
T ss_pred h---HhcccccCccCCCcCEEEECCchHHH------HHHHHHhcCCCcEEEEEEcc
Confidence 8 5544 556789999999998876 48889999999999998763
No 183
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.15 E-value=1.3e-11 Score=111.17 Aligned_cols=93 Identities=14% Similarity=0.026 Sum_probs=72.2
Q ss_pred hcCCceeeccCcCCccccCCCCCCC-eEEEEeCCHHHHHhcCCC---------CcEEEeccCCCCCCCCCCCCeeEEEec
Q 022305 136 KYYSEVFPPSNTPGVSHFPPGYKQD-RIVGMGMNEEELKRNPVL---------TEYVVQDLNLNPKLPFEDNSFDVITNV 205 (299)
Q Consensus 136 ~~~~~vLDiGcG~G~~~~~~~~~~~-~v~gvD~S~~ml~~a~~~---------~~~~~~D~~~~~~lpf~~~~FD~Vis~ 205 (299)
+...+|||+|||+|...+.....+. +|+|+|+|+.|++.++++ ++++++|+ .+++. +++||+|++.
T Consensus 124 ~~~~~VLDlgcG~G~~~~~la~~~~~~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~---~~~~~-~~~fD~Vi~~ 199 (278)
T 2frn_A 124 KPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDN---RDFPG-ENIADRILMG 199 (278)
T ss_dssp CTTCEEEETTCTTTTTHHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCT---TTCCC-CSCEEEEEEC
T ss_pred CCCCEEEEecccCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCH---HHhcc-cCCccEEEEC
Confidence 3457899999999975444333333 699999999999877642 66889998 66665 7889999986
Q ss_pred ccccccCCHHHHHHHHHhhccCCcEEEEEec
Q 022305 206 VSVDYLTKPIEVFKEMCQVLKPGGLAIVSFS 236 (299)
Q Consensus 206 ~~l~~~~d~~~~l~ei~rvLkpGG~lii~~~ 236 (299)
.. .+...+++++.++|||||.+++...
T Consensus 200 ~p----~~~~~~l~~~~~~LkpgG~l~~~~~ 226 (278)
T 2frn_A 200 YV----VRTHEFIPKALSIAKDGAIIHYHNT 226 (278)
T ss_dssp CC----SSGGGGHHHHHHHEEEEEEEEEEEE
T ss_pred Cc----hhHHHHHHHHHHHCCCCeEEEEEEe
Confidence 33 4557899999999999998888644
No 184
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.14 E-value=2.9e-11 Score=110.03 Aligned_cols=98 Identities=13% Similarity=0.114 Sum_probs=69.4
Q ss_pred cCCceeeccCcCCc--cccCCCCCCCeEEEEeCCHHHHHhcCC-------------CCcEEEeccCCCCCCCCCCCCeeE
Q 022305 137 YYSEVFPPSNTPGV--SHFPPGYKQDRIVGMGMNEEELKRNPV-------------LTEYVVQDLNLNPKLPFEDNSFDV 201 (299)
Q Consensus 137 ~~~~vLDiGcG~G~--~~~~~~~~~~~v~gvD~S~~ml~~a~~-------------~~~~~~~D~~~~~~lpf~~~~FD~ 201 (299)
...+|||+|||+|. ..+....+..+|+++|+++.|++.|++ +++++.+|.. ..++..+++||+
T Consensus 83 ~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~--~~l~~~~~~fDv 160 (294)
T 3adn_A 83 HAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGV--NFVNQTSQTFDV 160 (294)
T ss_dssp TCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSC--C---CCCCCEEE
T ss_pred CCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHH--HHHhhcCCCccE
Confidence 45799999999996 233333346799999999999986543 4788999972 223445789999
Q ss_pred EEecccccccCCH----HHHHHHHHhhccCCcEEEEEec
Q 022305 202 ITNVVSVDYLTKP----IEVFKEMCQVLKPGGLAIVSFS 236 (299)
Q Consensus 202 Vis~~~l~~~~d~----~~~l~ei~rvLkpGG~lii~~~ 236 (299)
|++.......+.. ..+++++.++|||||.+++...
T Consensus 161 Ii~D~~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~ 199 (294)
T 3adn_A 161 IISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNG 199 (294)
T ss_dssp EEECC----------CCHHHHHHHHHTEEEEEEEEEEEE
T ss_pred EEECCCCccCcchhccHHHHHHHHHHhcCCCCEEEEecC
Confidence 9996554333221 6799999999999999998754
No 185
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.13 E-value=1.4e-11 Score=107.02 Aligned_cols=100 Identities=21% Similarity=0.192 Sum_probs=74.4
Q ss_pred HHHHHHhh---hcCCceeeccCcCCcccc--CCCCC------CCeEEEEeCCHHHHHhcCC-------------CCcEEE
Q 022305 128 DPAIAALT---KYYSEVFPPSNTPGVSHF--PPGYK------QDRIVGMGMNEEELKRNPV-------------LTEYVV 183 (299)
Q Consensus 128 ~~~~~~l~---~~~~~vLDiGcG~G~~~~--~~~~~------~~~v~gvD~S~~ml~~a~~-------------~~~~~~ 183 (299)
..+++.+. +...+|||+|||+|.... ..... ..+|+++|+++.+++.+++ +++++.
T Consensus 72 ~~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~ 151 (227)
T 1r18_A 72 AFALEYLRDHLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVE 151 (227)
T ss_dssp HHHHHHTTTTCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEE
T ss_pred HHHHHHHHhhCCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEE
Confidence 33455552 334689999999996222 11111 2599999999999987653 467888
Q ss_pred eccCCCCCCCCCC-CCeeEEEecccccccCCHHHHHHHHHhhccCCcEEEEEecC
Q 022305 184 QDLNLNPKLPFED-NSFDVITNVVSVDYLTKPIEVFKEMCQVLKPGGLAIVSFSN 237 (299)
Q Consensus 184 ~D~~~~~~lpf~~-~~FD~Vis~~~l~~~~d~~~~l~ei~rvLkpGG~lii~~~~ 237 (299)
+|. .. ++++ ++||+|++..+++++. +++.++|||||.+++.+..
T Consensus 152 ~d~---~~-~~~~~~~fD~I~~~~~~~~~~------~~~~~~LkpgG~lvi~~~~ 196 (227)
T 1r18_A 152 GDG---RK-GYPPNAPYNAIHVGAAAPDTP------TELINQLASGGRLIVPVGP 196 (227)
T ss_dssp SCG---GG-CCGGGCSEEEEEECSCBSSCC------HHHHHTEEEEEEEEEEESC
T ss_pred CCc---cc-CCCcCCCccEEEECCchHHHH------HHHHHHhcCCCEEEEEEec
Confidence 888 44 4444 7899999999999875 7899999999999998764
No 186
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.13 E-value=4e-11 Score=108.03 Aligned_cols=100 Identities=14% Similarity=0.122 Sum_probs=72.2
Q ss_pred CCceeeccCcCCccccCCCCCC-CeEEEEeC-CHHHHHhcCCC------------------CcEEEeccCCC-CCCC--C
Q 022305 138 YSEVFPPSNTPGVSHFPPGYKQ-DRIVGMGM-NEEELKRNPVL------------------TEYVVQDLNLN-PKLP--F 194 (299)
Q Consensus 138 ~~~vLDiGcG~G~~~~~~~~~~-~~v~gvD~-S~~ml~~a~~~------------------~~~~~~D~~~~-~~lp--f 194 (299)
..+|||+|||+|...+.....+ .+|+|+|+ |+.|++.++++ +++...|.... ..+. +
T Consensus 80 ~~~vLDlG~G~G~~~~~~a~~~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 159 (281)
T 3bzb_A 80 GKTVCELGAGAGLVSIVAFLAGADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSLQRCT 159 (281)
T ss_dssp TCEEEETTCTTSHHHHHHHHTTCSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHHHHHH
T ss_pred CCeEEEecccccHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHHHhhc
Confidence 4589999999997433322223 48999999 89999865443 33444443100 1111 0
Q ss_pred CCCCeeEEEecccccccCCHHHHHHHHHhhcc---C--CcEEEEEecC
Q 022305 195 EDNSFDVITNVVSVDYLTKPIEVFKEMCQVLK---P--GGLAIVSFSN 237 (299)
Q Consensus 195 ~~~~FD~Vis~~~l~~~~d~~~~l~ei~rvLk---p--GG~lii~~~~ 237 (299)
++++||+|++..+++|.++...+++++.++|| | ||.+++.+..
T Consensus 160 ~~~~fD~Ii~~dvl~~~~~~~~ll~~l~~~Lk~~~p~~gG~l~v~~~~ 207 (281)
T 3bzb_A 160 GLQRFQVVLLADLLSFHQAHDALLRSVKMLLALPANDPTAVALVTFTH 207 (281)
T ss_dssp SCSSBSEEEEESCCSCGGGHHHHHHHHHHHBCCTTTCTTCEEEEEECC
T ss_pred cCCCCCEEEEeCcccChHHHHHHHHHHHHHhcccCCCCCCEEEEEEEe
Confidence 46789999999999999999999999999999 9 9988776544
No 187
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.13 E-value=2.6e-11 Score=115.73 Aligned_cols=94 Identities=11% Similarity=-0.043 Sum_probs=70.0
Q ss_pred cCCceeeccCcCCccccCCC--CCCCeEEEEeCCHHHHHhc-------C----------CCCcEEEeccCCCCCC--CC-
Q 022305 137 YYSEVFPPSNTPGVSHFPPG--YKQDRIVGMGMNEEELKRN-------P----------VLTEYVVQDLNLNPKL--PF- 194 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~~~~~~--~~~~~v~gvD~S~~ml~~a-------~----------~~~~~~~~D~~~~~~l--pf- 194 (299)
...+|||+|||+|...+... .+..+|+|+|+|+.+++.| + .+++++.+|. ... ++
T Consensus 242 ~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~gD~---~~~~~~~~ 318 (433)
T 1u2z_A 242 KGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKS---FVDNNRVA 318 (433)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSC---STTCHHHH
T ss_pred CCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEcCc---cccccccc
Confidence 44689999999997333222 2345899999999998776 3 2456777654 221 22
Q ss_pred -CCCCeeEEEecccccccCCHHHHHHHHHhhccCCcEEEEE
Q 022305 195 -EDNSFDVITNVVSVDYLTKPIEVFKEMCQVLKPGGLAIVS 234 (299)
Q Consensus 195 -~~~~FD~Vis~~~l~~~~d~~~~l~ei~rvLkpGG~lii~ 234 (299)
..++||+|+++.++ +.+++..+|+++.++|||||.+++.
T Consensus 319 ~~~~~FDvIvvn~~l-~~~d~~~~L~el~r~LKpGG~lVi~ 358 (433)
T 1u2z_A 319 ELIPQCDVILVNNFL-FDEDLNKKVEKILQTAKVGCKIISL 358 (433)
T ss_dssp HHGGGCSEEEECCTT-CCHHHHHHHHHHHTTCCTTCEEEES
T ss_pred cccCCCCEEEEeCcc-ccccHHHHHHHHHHhCCCCeEEEEe
Confidence 25789999998777 5578889999999999999999885
No 188
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.13 E-value=4.7e-11 Score=109.53 Aligned_cols=98 Identities=17% Similarity=0.172 Sum_probs=70.6
Q ss_pred cCCceeeccCcCCc--cccCCCC-CCCeEEEEeCCHHHHHhcCC--------CCcEEEeccCCCCCCCCCCCCeeEEEec
Q 022305 137 YYSEVFPPSNTPGV--SHFPPGY-KQDRIVGMGMNEEELKRNPV--------LTEYVVQDLNLNPKLPFEDNSFDVITNV 205 (299)
Q Consensus 137 ~~~~vLDiGcG~G~--~~~~~~~-~~~~v~gvD~S~~ml~~a~~--------~~~~~~~D~~~~~~lpf~~~~FD~Vis~ 205 (299)
...+|||+|||+|. .++.... ...+|+|+|+|+.+++.+++ +++++++|+ ..++..+++||+|++.
T Consensus 118 ~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~---~~~~~~~~~fD~Il~d 194 (315)
T 1ixk_A 118 PGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSS---LHIGELNVEFDKILLD 194 (315)
T ss_dssp TTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCG---GGGGGGCCCEEEEEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECCh---hhcccccccCCEEEEe
Confidence 44689999999996 3333322 34799999999999987654 367888888 6666556789999973
Q ss_pred ------ccccccCCH----------------HHHHHHHHhhccCCcEEEEEecC
Q 022305 206 ------VSVDYLTKP----------------IEVFKEMCQVLKPGGLAIVSFSN 237 (299)
Q Consensus 206 ------~~l~~~~d~----------------~~~l~ei~rvLkpGG~lii~~~~ 237 (299)
.++++.++. .++|+++.++|||||.+++++..
T Consensus 195 ~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs 248 (315)
T 1ixk_A 195 APCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCS 248 (315)
T ss_dssp CCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESC
T ss_pred CCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 223332321 58899999999999999987543
No 189
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.13 E-value=1.6e-11 Score=114.08 Aligned_cols=95 Identities=14% Similarity=0.139 Sum_probs=73.5
Q ss_pred cCCceeeccCcCCccccCC-CCCCCeEEEEeCCHHHHHhcCC---------CCcEEEeccCCCCCCCCCCCCeeEEEecc
Q 022305 137 YYSEVFPPSNTPGVSHFPP-GYKQDRIVGMGMNEEELKRNPV---------LTEYVVQDLNLNPKLPFEDNSFDVITNVV 206 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~~~~~-~~~~~~v~gvD~S~~ml~~a~~---------~~~~~~~D~~~~~~lpf~~~~FD~Vis~~ 206 (299)
...+|||+|||+|...... ..+..+|+|+|+|+ |++.+++ +++++.+|+ +.++++ ++||+|++..
T Consensus 50 ~~~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~l~~~v~~~~~d~---~~~~~~-~~~D~Ivs~~ 124 (348)
T 2y1w_A 50 KDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKV---EEVSLP-EQVDIIISEP 124 (348)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCT---TTCCCS-SCEEEEEECC
T ss_pred CcCEEEEcCCCccHHHHHHHhCCCCEEEEECCHH-HHHHHHHHHHHcCCCCcEEEEEcch---hhCCCC-CceeEEEEeC
Confidence 3468999999999733322 22346999999996 8776543 378899999 777765 5799999998
Q ss_pred cccccC--CHHHHHHHHHhhccCCcEEEEEec
Q 022305 207 SVDYLT--KPIEVFKEMCQVLKPGGLAIVSFS 236 (299)
Q Consensus 207 ~l~~~~--d~~~~l~ei~rvLkpGG~lii~~~ 236 (299)
.++|+. +....+.++.++|||||.++++..
T Consensus 125 ~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 156 (348)
T 2y1w_A 125 MGYMLFNERMLESYLHAKKYLKPSGNMFPTIG 156 (348)
T ss_dssp CBTTBTTTSHHHHHHHGGGGEEEEEEEESCEE
T ss_pred chhcCChHHHHHHHHHHHhhcCCCeEEEEecC
Confidence 888774 567889999999999999987643
No 190
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.12 E-value=1e-11 Score=112.02 Aligned_cols=92 Identities=10% Similarity=-0.038 Sum_probs=67.1
Q ss_pred CCceeeccCcCCccccCCCCCCCeEEEEeCCHHHHHhcCC----------CCcEE--EeccCCCCCCCCCCCCeeEEEec
Q 022305 138 YSEVFPPSNTPGVSHFPPGYKQDRIVGMGMNEEELKRNPV----------LTEYV--VQDLNLNPKLPFEDNSFDVITNV 205 (299)
Q Consensus 138 ~~~vLDiGcG~G~~~~~~~~~~~~v~gvD~S~~ml~~a~~----------~~~~~--~~D~~~~~~lpf~~~~FD~Vis~ 205 (299)
..+|||+|||+|......... .+|+|+|+|+ |+..+++ +++++ ++|+ ..++ +++||+|+|.
T Consensus 83 g~~VLDlGcGtG~~s~~la~~-~~V~gVD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~---~~l~--~~~fD~Vvsd 155 (276)
T 2wa2_A 83 KGTVVDLGCGRGSWSYYAASQ-PNVREVKAYT-LGTSGHEKPRLVETFGWNLITFKSKVDV---TKME--PFQADTVLCD 155 (276)
T ss_dssp CEEEEEESCTTCHHHHHHHTS-TTEEEEEEEC-CCCTTSCCCCCCCCTTGGGEEEECSCCG---GGCC--CCCCSEEEEC
T ss_pred CCEEEEeccCCCHHHHHHHHc-CCEEEEECch-hhhhhhhchhhhhhcCCCeEEEeccCcH---hhCC--CCCcCEEEEC
Confidence 458999999999633222212 7899999999 7543321 36788 8888 6665 7899999998
Q ss_pred ccccccCCH----H---HHHHHHHhhccCCc--EEEEEecC
Q 022305 206 VSVDYLTKP----I---EVFKEMCQVLKPGG--LAIVSFSN 237 (299)
Q Consensus 206 ~~l~~~~d~----~---~~l~ei~rvLkpGG--~lii~~~~ 237 (299)
.+ ++..++ . .+|+++.++||||| .|++.+..
T Consensus 156 ~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~~ 195 (276)
T 2wa2_A 156 IG-ESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKVLN 195 (276)
T ss_dssp CC-CCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEESC
T ss_pred CC-cCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEeCC
Confidence 77 554332 1 47999999999999 99987544
No 191
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.12 E-value=1.8e-11 Score=113.84 Aligned_cols=99 Identities=14% Similarity=0.104 Sum_probs=76.5
Q ss_pred cCCceeeccCcCCccccCCCC---CCCeEEEEeCCHHHHHhcCC--------CCcEEEeccCCCCCCCCCCCCeeEEEec
Q 022305 137 YYSEVFPPSNTPGVSHFPPGY---KQDRIVGMGMNEEELKRNPV--------LTEYVVQDLNLNPKLPFEDNSFDVITNV 205 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~~~~~~~---~~~~v~gvD~S~~ml~~a~~--------~~~~~~~D~~~~~~lpf~~~~FD~Vis~ 205 (299)
....|||+|||+|+..+.... +..+++|+|+|+.|++.|++ +++++++|+ .+++.+.+.||+|+++
T Consensus 203 ~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~D~---~~~~~~~~~~D~Ii~n 279 (354)
T 3tma_A 203 PGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLSWIRFLRADA---RHLPRFFPEVDRILAN 279 (354)
T ss_dssp TTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCTTCEEEECCG---GGGGGTCCCCSEEEEC
T ss_pred CCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCCceEEEeCCh---hhCccccCCCCEEEEC
Confidence 346899999999984433222 45899999999999997765 378999999 7888777889999996
Q ss_pred cccccc--------CCHHHHHHHHHhhccCCcEEEEEecCc
Q 022305 206 VSVDYL--------TKPIEVFKEMCQVLKPGGLAIVSFSNR 238 (299)
Q Consensus 206 ~~l~~~--------~d~~~~l~ei~rvLkpGG~lii~~~~~ 238 (299)
--.... .....+++++.++|||||.+++.+++.
T Consensus 280 pPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~~~ 320 (354)
T 3tma_A 280 PPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTLRP 320 (354)
T ss_dssp CCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEESCH
T ss_pred CCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeCCH
Confidence 433221 123678999999999999999987754
No 192
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.11 E-value=1.2e-11 Score=107.81 Aligned_cols=93 Identities=16% Similarity=0.174 Sum_probs=72.7
Q ss_pred cCCceeeccCcCCcc--ccCCCCCCCeEEEEeCCHHHHHhcCC---------CCcEEEeccCCCCC-CCCC--CCCeeEE
Q 022305 137 YYSEVFPPSNTPGVS--HFPPGYKQDRIVGMGMNEEELKRNPV---------LTEYVVQDLNLNPK-LPFE--DNSFDVI 202 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~--~~~~~~~~~~v~gvD~S~~ml~~a~~---------~~~~~~~D~~~~~~-lpf~--~~~FD~V 202 (299)
...+|||+|||+|.. .+....++.+|+++|+|+.+++.+++ +++++.+|+ .. ++.. +++||+|
T Consensus 54 ~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~---~~~~~~~~~~~~fD~I 130 (233)
T 2gpy_A 54 APARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDA---LQLGEKLELYPLFDVL 130 (233)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCG---GGSHHHHTTSCCEEEE
T ss_pred CCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCH---HHHHHhcccCCCccEE
Confidence 456899999999963 23333457899999999999987764 367788887 44 2433 5789999
Q ss_pred EecccccccCCHHHHHHHHHhhccCCcEEEEEe
Q 022305 203 TNVVSVDYLTKPIEVFKEMCQVLKPGGLAIVSF 235 (299)
Q Consensus 203 is~~~l~~~~d~~~~l~ei~rvLkpGG~lii~~ 235 (299)
++.... .+...+++++.++|||||.++++.
T Consensus 131 ~~~~~~---~~~~~~l~~~~~~L~pgG~lv~~~ 160 (233)
T 2gpy_A 131 FIDAAK---GQYRRFFDMYSPMVRPGGLILSDN 160 (233)
T ss_dssp EEEGGG---SCHHHHHHHHGGGEEEEEEEEEET
T ss_pred EECCCH---HHHHHHHHHHHHHcCCCeEEEEEc
Confidence 997664 478899999999999999999873
No 193
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.10 E-value=1.3e-10 Score=111.00 Aligned_cols=98 Identities=16% Similarity=0.163 Sum_probs=73.6
Q ss_pred cCCceeeccCcCCc--cccCCCCCCCeEEEEeCCHHHHHhcCC-------CCcEEEeccCCCCCCC--CCCCCeeEEEec
Q 022305 137 YYSEVFPPSNTPGV--SHFPPGYKQDRIVGMGMNEEELKRNPV-------LTEYVVQDLNLNPKLP--FEDNSFDVITNV 205 (299)
Q Consensus 137 ~~~~vLDiGcG~G~--~~~~~~~~~~~v~gvD~S~~ml~~a~~-------~~~~~~~D~~~~~~lp--f~~~~FD~Vis~ 205 (299)
...+|||+|||+|. .++....++.+|+|+|+|+.+++.+++ .++++++|+ ..++ +++++||+|++.
T Consensus 246 ~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~~~~~~~~D~---~~~~~~~~~~~fD~Vl~D 322 (429)
T 1sqg_A 246 NGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDG---RYPSQWCGEQQFDRILLD 322 (429)
T ss_dssp TTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCT---TCTHHHHTTCCEEEEEEE
T ss_pred CcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCCCeEEEeCch---hhchhhcccCCCCEEEEe
Confidence 44689999999996 333333345899999999999886654 267888998 6665 566889999952
Q ss_pred ------ccccccCCH----------------HHHHHHHHhhccCCcEEEEEecC
Q 022305 206 ------VSVDYLTKP----------------IEVFKEMCQVLKPGGLAIVSFSN 237 (299)
Q Consensus 206 ------~~l~~~~d~----------------~~~l~ei~rvLkpGG~lii~~~~ 237 (299)
.++++.++. .++++++.++|||||.+++++..
T Consensus 323 ~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs 376 (429)
T 1sqg_A 323 APCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCS 376 (429)
T ss_dssp CCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESC
T ss_pred CCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 334444443 47899999999999999987643
No 194
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.10 E-value=6.2e-11 Score=113.87 Aligned_cols=98 Identities=18% Similarity=0.274 Sum_probs=72.8
Q ss_pred cCCceeeccCcCCc--cccCCCCCC-CeEEEEeCCHHHHHhcCC--------CCcEEEeccCCCCCCC--CCCCCeeEEE
Q 022305 137 YYSEVFPPSNTPGV--SHFPPGYKQ-DRIVGMGMNEEELKRNPV--------LTEYVVQDLNLNPKLP--FEDNSFDVIT 203 (299)
Q Consensus 137 ~~~~vLDiGcG~G~--~~~~~~~~~-~~v~gvD~S~~ml~~a~~--------~~~~~~~D~~~~~~lp--f~~~~FD~Vi 203 (299)
...+|||+|||+|. .++....++ .+|+|+|+|+.+++.+++ +++++++|+ ..++ +++++||+|+
T Consensus 259 ~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~---~~~~~~~~~~~fD~Vl 335 (450)
T 2yxl_A 259 PGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDA---RKAPEIIGEEVADKVL 335 (450)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCT---TCCSSSSCSSCEEEEE
T ss_pred CcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcCh---hhcchhhccCCCCEEE
Confidence 44689999999996 333333344 799999999999986543 367788888 6665 5567899999
Q ss_pred e------cccccccCCH----------------HHHHHHHHhhccCCcEEEEEecC
Q 022305 204 N------VVSVDYLTKP----------------IEVFKEMCQVLKPGGLAIVSFSN 237 (299)
Q Consensus 204 s------~~~l~~~~d~----------------~~~l~ei~rvLkpGG~lii~~~~ 237 (299)
+ ..++++.++. .++|+++.++|||||.+++++..
T Consensus 336 ~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs 391 (450)
T 2yxl_A 336 LDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCS 391 (450)
T ss_dssp EECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESC
T ss_pred EcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 5 2344444443 57899999999999999887653
No 195
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.10 E-value=1.3e-11 Score=106.75 Aligned_cols=94 Identities=13% Similarity=0.109 Sum_probs=71.4
Q ss_pred cCCceeeccCcCCcc--ccCCCCC-CCeEEEEeCCHHHHHhcCC---------CCcEEEeccCCCCCC-C-CC----CCC
Q 022305 137 YYSEVFPPSNTPGVS--HFPPGYK-QDRIVGMGMNEEELKRNPV---------LTEYVVQDLNLNPKL-P-FE----DNS 198 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~--~~~~~~~-~~~v~gvD~S~~ml~~a~~---------~~~~~~~D~~~~~~l-p-f~----~~~ 198 (299)
...+|||+|||+|.. .+....+ +.+|+++|+|+.|++.+++ +++++++|+ ... + +. .++
T Consensus 64 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~---~~~~~~~~~~~~~~~ 140 (225)
T 3tr6_A 64 QAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPA---KDTLAELIHAGQAWQ 140 (225)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCH---HHHHHHHHTTTCTTC
T ss_pred CCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCH---HHHHHHhhhccCCCC
Confidence 346899999999963 3344444 7899999999999987654 277888887 332 2 11 178
Q ss_pred eeEEEecccccccCCHHHHHHHHHhhccCCcEEEEEec
Q 022305 199 FDVITNVVSVDYLTKPIEVFKEMCQVLKPGGLAIVSFS 236 (299)
Q Consensus 199 FD~Vis~~~l~~~~d~~~~l~ei~rvLkpGG~lii~~~ 236 (299)
||+|++... ..+...+++++.++|||||.+++...
T Consensus 141 fD~v~~~~~---~~~~~~~l~~~~~~L~pgG~lv~~~~ 175 (225)
T 3tr6_A 141 YDLIYIDAD---KANTDLYYEESLKLLREGGLIAVDNV 175 (225)
T ss_dssp EEEEEECSC---GGGHHHHHHHHHHHEEEEEEEEEECS
T ss_pred ccEEEECCC---HHHHHHHHHHHHHhcCCCcEEEEeCC
Confidence 999996653 45678899999999999999998743
No 196
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.08 E-value=2e-11 Score=106.33 Aligned_cols=89 Identities=10% Similarity=0.247 Sum_probs=68.9
Q ss_pred ceeeccCcCCcccc--CCCC-CCCeEEEEeCCHHHHHhcCC----------CCcEEEeccCCCCC-CC-CCCCCeeEEEe
Q 022305 140 EVFPPSNTPGVSHF--PPGY-KQDRIVGMGMNEEELKRNPV----------LTEYVVQDLNLNPK-LP-FEDNSFDVITN 204 (299)
Q Consensus 140 ~vLDiGcG~G~~~~--~~~~-~~~~v~gvD~S~~ml~~a~~----------~~~~~~~D~~~~~~-lp-f~~~~FD~Vis 204 (299)
+|||+|||+|...+ .... ++++|+++|+|++|++.|++ +++++.+|+ .+ ++ +++++||+|++
T Consensus 59 ~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda---~~~l~~~~~~~fD~V~~ 135 (221)
T 3dr5_A 59 GAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRP---LDVMSRLANDSYQLVFG 135 (221)
T ss_dssp EEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCH---HHHGGGSCTTCEEEEEE
T ss_pred CEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCH---HHHHHHhcCCCcCeEEE
Confidence 89999999996333 2222 36899999999999987653 367888887 33 33 34789999998
Q ss_pred cccccccCCHHHHHHHHHhhccCCcEEEEE
Q 022305 205 VVSVDYLTKPIEVFKEMCQVLKPGGLAIVS 234 (299)
Q Consensus 205 ~~~l~~~~d~~~~l~ei~rvLkpGG~lii~ 234 (299)
... ..+...+++++.++|||||.+++.
T Consensus 136 d~~---~~~~~~~l~~~~~~LkpGG~lv~d 162 (221)
T 3dr5_A 136 QVS---PMDLKALVDAAWPLLRRGGALVLA 162 (221)
T ss_dssp CCC---TTTHHHHHHHHHHHEEEEEEEEET
T ss_pred cCc---HHHHHHHHHHHHHHcCCCcEEEEe
Confidence 753 456778999999999999999985
No 197
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.08 E-value=3.4e-11 Score=104.05 Aligned_cols=94 Identities=16% Similarity=0.113 Sum_probs=71.2
Q ss_pred cCCceeeccCcCCcc--ccCCCCC-CCeEEEEeCCHHHHHhcCC---------CCcEEEeccCCCCCC-C-CC---CCCe
Q 022305 137 YYSEVFPPSNTPGVS--HFPPGYK-QDRIVGMGMNEEELKRNPV---------LTEYVVQDLNLNPKL-P-FE---DNSF 199 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~--~~~~~~~-~~~v~gvD~S~~ml~~a~~---------~~~~~~~D~~~~~~l-p-f~---~~~F 199 (299)
...+|||+|||+|.. .+....+ +.+|+|+|+++.+++.+++ +++++++|+ ... + +. .++|
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~---~~~~~~~~~~~~~~f 134 (223)
T 3duw_A 58 GARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLA---LDSLQQIENEKYEPF 134 (223)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCH---HHHHHHHHHTTCCCC
T ss_pred CCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCH---HHHHHHHHhcCCCCc
Confidence 457899999999963 3344444 6899999999999987654 377888887 332 2 11 2679
Q ss_pred eEEEecccccccCCHHHHHHHHHhhccCCcEEEEEec
Q 022305 200 DVITNVVSVDYLTKPIEVFKEMCQVLKPGGLAIVSFS 236 (299)
Q Consensus 200 D~Vis~~~l~~~~d~~~~l~ei~rvLkpGG~lii~~~ 236 (299)
|+|++... ..+...+++++.++|||||.+++...
T Consensus 135 D~v~~d~~---~~~~~~~l~~~~~~L~pgG~lv~~~~ 168 (223)
T 3duw_A 135 DFIFIDAD---KQNNPAYFEWALKLSRPGTVIIGDNV 168 (223)
T ss_dssp SEEEECSC---GGGHHHHHHHHHHTCCTTCEEEEESC
T ss_pred CEEEEcCC---cHHHHHHHHHHHHhcCCCcEEEEeCC
Confidence 99998765 34667899999999999998888643
No 198
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.07 E-value=7.9e-12 Score=110.41 Aligned_cols=93 Identities=14% Similarity=0.136 Sum_probs=71.5
Q ss_pred cCCceeeccCcCCccc--cCCCCC-CCeEEEEeCCHHHHHhcCC---------CCcEEEeccCCCCCC-CCC-----CCC
Q 022305 137 YYSEVFPPSNTPGVSH--FPPGYK-QDRIVGMGMNEEELKRNPV---------LTEYVVQDLNLNPKL-PFE-----DNS 198 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~~--~~~~~~-~~~v~gvD~S~~ml~~a~~---------~~~~~~~D~~~~~~l-pf~-----~~~ 198 (299)
...+|||+|||+|... ++...+ +++|+++|+|++|++.|++ +++++++|+ ... +.. +++
T Consensus 60 ~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda---~~~l~~~~~~~~~~~ 136 (242)
T 3r3h_A 60 RAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPA---LDTLHSLLNEGGEHQ 136 (242)
T ss_dssp TCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCH---HHHHHHHHHHHCSSC
T ss_pred CcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCH---HHHHHHHhhccCCCC
Confidence 3578999999999633 333333 6899999999999886654 378889988 433 321 578
Q ss_pred eeEEEecccccccCCHHHHHHHHHhhccCCcEEEEEe
Q 022305 199 FDVITNVVSVDYLTKPIEVFKEMCQVLKPGGLAIVSF 235 (299)
Q Consensus 199 FD~Vis~~~l~~~~d~~~~l~ei~rvLkpGG~lii~~ 235 (299)
||+|++... ..+...+++++.++|||||.++++.
T Consensus 137 fD~V~~d~~---~~~~~~~l~~~~~~LkpGG~lv~d~ 170 (242)
T 3r3h_A 137 FDFIFIDAD---KTNYLNYYELALKLVTPKGLIAIDN 170 (242)
T ss_dssp EEEEEEESC---GGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred EeEEEEcCC---hHHhHHHHHHHHHhcCCCeEEEEEC
Confidence 999998754 4567889999999999999999863
No 199
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.05 E-value=3.5e-10 Score=101.78 Aligned_cols=98 Identities=12% Similarity=0.098 Sum_probs=72.0
Q ss_pred cCCceeeccCcCCcc--ccCCCCCCCeEEEEeCCHHHHHhcCC------------CCcEEEeccCCCCC-CCCCCCCeeE
Q 022305 137 YYSEVFPPSNTPGVS--HFPPGYKQDRIVGMGMNEEELKRNPV------------LTEYVVQDLNLNPK-LPFEDNSFDV 201 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~--~~~~~~~~~~v~gvD~S~~ml~~a~~------------~~~~~~~D~~~~~~-lpf~~~~FD~ 201 (299)
...+|||+|||+|.. .+....+..+|+++|+++.|++.+++ +++++.+|+ .. ++..+++||+
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~---~~~l~~~~~~fD~ 151 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDG---FMHIAKSENQYDV 151 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCS---HHHHHTCCSCEEE
T ss_pred CCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcH---HHHHhhCCCCeeE
Confidence 357899999999962 22333345799999999999986653 367888887 33 3444678999
Q ss_pred EEecccccccCC----HHHHHHHHHhhccCCcEEEEEecC
Q 022305 202 ITNVVSVDYLTK----PIEVFKEMCQVLKPGGLAIVSFSN 237 (299)
Q Consensus 202 Vis~~~l~~~~d----~~~~l~ei~rvLkpGG~lii~~~~ 237 (299)
|++....++.+. ..++++++.++|||||.+++...+
T Consensus 152 Ii~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~~~ 191 (275)
T 1iy9_A 152 IMVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQTDN 191 (275)
T ss_dssp EEESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEECCC
T ss_pred EEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCC
Confidence 999654332221 268999999999999999997544
No 200
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.05 E-value=3.2e-10 Score=104.31 Aligned_cols=99 Identities=16% Similarity=0.175 Sum_probs=71.7
Q ss_pred cCCceeeccCcCCc--cccCCCCCCCeEEEEeCCHHHHHhcCC------------CCcEEEeccCCCCC-CCCCCCCeeE
Q 022305 137 YYSEVFPPSNTPGV--SHFPPGYKQDRIVGMGMNEEELKRNPV------------LTEYVVQDLNLNPK-LPFEDNSFDV 201 (299)
Q Consensus 137 ~~~~vLDiGcG~G~--~~~~~~~~~~~v~gvD~S~~ml~~a~~------------~~~~~~~D~~~~~~-lpf~~~~FD~ 201 (299)
...+|||+|||+|. ..+....+..+|+++|+|+.|++.+++ +++++.+|+ .. ++..+++||+
T Consensus 116 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~---~~~l~~~~~~fDv 192 (321)
T 2pt6_A 116 EPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDA---SKFLENVTNTYDV 192 (321)
T ss_dssp SCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCH---HHHHHHCCSCEEE
T ss_pred CCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccH---HHHHhhcCCCceE
Confidence 34789999999996 233333356899999999999986543 367788887 33 3334678999
Q ss_pred EEecccccc--cCCH--HHHHHHHHhhccCCcEEEEEecCc
Q 022305 202 ITNVVSVDY--LTKP--IEVFKEMCQVLKPGGLAIVSFSNR 238 (299)
Q Consensus 202 Vis~~~l~~--~~d~--~~~l~ei~rvLkpGG~lii~~~~~ 238 (299)
|++...-.+ ..+. .++++++.++|||||.+++...+.
T Consensus 193 Ii~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~ 233 (321)
T 2pt6_A 193 IIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCESL 233 (321)
T ss_dssp EEEECCCSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEECCT
T ss_pred EEECCcCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCc
Confidence 998653221 1122 789999999999999999976543
No 201
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.04 E-value=1.3e-10 Score=104.39 Aligned_cols=98 Identities=18% Similarity=0.130 Sum_probs=71.9
Q ss_pred cCCceeeccCcCCccc--cCCCCCC-CeEEEEeCCHHHHHhcCC--------CCcEEEeccCCCCCCCC----CCCCeeE
Q 022305 137 YYSEVFPPSNTPGVSH--FPPGYKQ-DRIVGMGMNEEELKRNPV--------LTEYVVQDLNLNPKLPF----EDNSFDV 201 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~~--~~~~~~~-~~v~gvD~S~~ml~~a~~--------~~~~~~~D~~~~~~lpf----~~~~FD~ 201 (299)
...+|||+|||+|... +....++ .+|+|+|+|+.+++.+++ +++++.+|+ ..++. .+++||+
T Consensus 83 ~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~D~---~~~~~~~~~~~~~fD~ 159 (274)
T 3ajd_A 83 EDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVLNTIIINADM---RKYKDYLLKNEIFFDK 159 (274)
T ss_dssp TTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCH---HHHHHHHHHTTCCEEE
T ss_pred CcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCCcEEEEeCCh---HhcchhhhhccccCCE
Confidence 3468999999999633 3333344 799999999999986554 367888888 55554 3678999
Q ss_pred EEec------cccc------------ccCCHHHHHHHHHhhccCCcEEEEEecC
Q 022305 202 ITNV------VSVD------------YLTKPIEVFKEMCQVLKPGGLAIVSFSN 237 (299)
Q Consensus 202 Vis~------~~l~------------~~~d~~~~l~ei~rvLkpGG~lii~~~~ 237 (299)
|++. .++. ......++++++.++|||||.+++++..
T Consensus 160 Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs 213 (274)
T 3ajd_A 160 ILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCS 213 (274)
T ss_dssp EEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESC
T ss_pred EEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECC
Confidence 9976 1121 1245678999999999999999987654
No 202
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.04 E-value=1.9e-10 Score=106.43 Aligned_cols=98 Identities=13% Similarity=0.149 Sum_probs=72.0
Q ss_pred cCCceeeccCcCCc--cccCCCCCCCeEEEEeCCHHHHHhcCC------------CCcEEEeccCCCCCC-C-CCCCCee
Q 022305 137 YYSEVFPPSNTPGV--SHFPPGYKQDRIVGMGMNEEELKRNPV------------LTEYVVQDLNLNPKL-P-FEDNSFD 200 (299)
Q Consensus 137 ~~~~vLDiGcG~G~--~~~~~~~~~~~v~gvD~S~~ml~~a~~------------~~~~~~~D~~~~~~l-p-f~~~~FD 200 (299)
...+|||+|||+|. ..+....+..+|+++|+|+.|++.|++ +++++.+|+ ... + +++++||
T Consensus 120 ~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~---~~~l~~~~~~~fD 196 (334)
T 1xj5_A 120 NPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDG---VAFLKNAAEGSYD 196 (334)
T ss_dssp CCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCH---HHHHHTSCTTCEE
T ss_pred CCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCH---HHHHHhccCCCcc
Confidence 35689999999996 333333456899999999999986653 367888887 432 2 3467899
Q ss_pred EEEecccccc--cCC--HHHHHHHHHhhccCCcEEEEEecC
Q 022305 201 VITNVVSVDY--LTK--PIEVFKEMCQVLKPGGLAIVSFSN 237 (299)
Q Consensus 201 ~Vis~~~l~~--~~d--~~~~l~ei~rvLkpGG~lii~~~~ 237 (299)
+|++.....+ ..+ ...+++++.++|||||.+++...+
T Consensus 197 lIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 237 (334)
T 1xj5_A 197 AVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQAES 237 (334)
T ss_dssp EEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEECCC
T ss_pred EEEECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEecCC
Confidence 9998654221 122 378999999999999999997443
No 203
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.03 E-value=8e-11 Score=102.95 Aligned_cols=97 Identities=12% Similarity=0.068 Sum_probs=71.9
Q ss_pred cCCceeeccCcCCccc--cCCCCC-CCeEEEEeCCHHHHHhcCC---------CCcEEEeccCC-CCCCCCCC--CCeeE
Q 022305 137 YYSEVFPPSNTPGVSH--FPPGYK-QDRIVGMGMNEEELKRNPV---------LTEYVVQDLNL-NPKLPFED--NSFDV 201 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~~--~~~~~~-~~~v~gvD~S~~ml~~a~~---------~~~~~~~D~~~-~~~lpf~~--~~FD~ 201 (299)
...+|||+|||+|... +....+ +.+++++|+|+.+++.|++ +++++.+|+.. ...++.++ ++||+
T Consensus 72 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~fD~ 151 (232)
T 3cbg_A 72 GAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLPEFDL 151 (232)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCCCEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCCcCE
Confidence 3468999999999632 333333 6799999999999987764 36788888620 01233334 78999
Q ss_pred EEecccccccCCHHHHHHHHHhhccCCcEEEEEec
Q 022305 202 ITNVVSVDYLTKPIEVFKEMCQVLKPGGLAIVSFS 236 (299)
Q Consensus 202 Vis~~~l~~~~d~~~~l~ei~rvLkpGG~lii~~~ 236 (299)
|++... ..+...+++++.++|||||.+++...
T Consensus 152 V~~d~~---~~~~~~~l~~~~~~LkpgG~lv~~~~ 183 (232)
T 3cbg_A 152 IFIDAD---KRNYPRYYEIGLNLLRRGGLMVIDNV 183 (232)
T ss_dssp EEECSC---GGGHHHHHHHHHHTEEEEEEEEEECT
T ss_pred EEECCC---HHHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 998754 35678899999999999999998743
No 204
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=99.02 E-value=8.8e-11 Score=107.33 Aligned_cols=95 Identities=13% Similarity=0.007 Sum_probs=66.1
Q ss_pred CCceeeccCcCCccccCCCCCCCeEEEEeC----CHHHHHhcC------CCCcEEEe-ccCCCCCCCCCCCCeeEEEecc
Q 022305 138 YSEVFPPSNTPGVSHFPPGYKQDRIVGMGM----NEEELKRNP------VLTEYVVQ-DLNLNPKLPFEDNSFDVITNVV 206 (299)
Q Consensus 138 ~~~vLDiGcG~G~~~~~~~~~~~~v~gvD~----S~~ml~~a~------~~~~~~~~-D~~~~~~lpf~~~~FD~Vis~~ 206 (299)
..+|||+|||+|......... .+|+|+|+ ++.+++... ..+.++++ |+ ..++ +++||+|+|..
T Consensus 83 g~~VLDlGcG~G~~s~~la~~-~~V~gvD~~~~~~~~~~~~~~~~~~~~~~v~~~~~~D~---~~l~--~~~fD~V~sd~ 156 (305)
T 2p41_A 83 EGKVVDLGCGRGGWSYYCGGL-KNVREVKGLTKGGPGHEEPIPMSTYGWNLVRLQSGVDV---FFIP--PERCDTLLCDI 156 (305)
T ss_dssp CEEEEEETCTTSHHHHHHHTS-TTEEEEEEECCCSTTSCCCCCCCSTTGGGEEEECSCCT---TTSC--CCCCSEEEECC
T ss_pred CCEEEEEcCCCCHHHHHHHhc-CCEEEEeccccCchhHHHHHHhhhcCCCCeEEEecccc---ccCC--cCCCCEEEECC
Confidence 468999999999632222212 58999999 665554322 23677777 77 5554 56899999976
Q ss_pred ccc---ccCCHH---HHHHHHHhhccCCcEEEEEecCc
Q 022305 207 SVD---YLTKPI---EVFKEMCQVLKPGGLAIVSFSNR 238 (299)
Q Consensus 207 ~l~---~~~d~~---~~l~ei~rvLkpGG~lii~~~~~ 238 (299)
+++ +..|.. .+|+++.++|||||.|++.+...
T Consensus 157 ~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~kv~~~ 194 (305)
T 2p41_A 157 GESSPNPTVEAGRTLRVLNLVENWLSNNTQFCVKVLNP 194 (305)
T ss_dssp CCCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEEEESCC
T ss_pred ccccCcchhhHHHHHHHHHHHHHHhCCCCEEEEEeCCC
Confidence 653 332332 58999999999999999976654
No 205
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.02 E-value=9.1e-11 Score=106.07 Aligned_cols=94 Identities=9% Similarity=0.151 Sum_probs=70.4
Q ss_pred cCCceeeccCcCCcccc--CCCCCCCeEEEEeCCHHHHHhcCCC---------CcEEEeccCCCCCCCCCCCCe---eEE
Q 022305 137 YYSEVFPPSNTPGVSHF--PPGYKQDRIVGMGMNEEELKRNPVL---------TEYVVQDLNLNPKLPFEDNSF---DVI 202 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~~~--~~~~~~~~v~gvD~S~~ml~~a~~~---------~~~~~~D~~~~~~lpf~~~~F---D~V 202 (299)
...+|||+|||+|...+ ... ++.+|+|+|+|+.|++.|+++ ++++++|+ .. +++ ++| |+|
T Consensus 123 ~~~~vLDlG~GsG~~~~~la~~-~~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~---~~-~~~-~~f~~~D~I 196 (284)
T 1nv8_A 123 GIKTVADIGTGSGAIGVSVAKF-SDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEF---LE-PFK-EKFASIEMI 196 (284)
T ss_dssp TCCEEEEESCTTSHHHHHHHHH-SSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESST---TG-GGG-GGTTTCCEE
T ss_pred CCCEEEEEeCchhHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcc---hh-hcc-cccCCCCEE
Confidence 34689999999997332 333 678999999999999977652 77899998 43 232 578 999
Q ss_pred Eec------------ccccccC--------CHHHHHHHHH-hhccCCcEEEEEecC
Q 022305 203 TNV------------VSVDYLT--------KPIEVFKEMC-QVLKPGGLAIVSFSN 237 (299)
Q Consensus 203 is~------------~~l~~~~--------d~~~~l~ei~-rvLkpGG~lii~~~~ 237 (299)
+++ .+. |-+ |...+++++. +.|||||.++++++.
T Consensus 197 vsnPPyi~~~~~l~~~v~-~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~~~ 251 (284)
T 1nv8_A 197 LSNPPYVKSSAHLPKDVL-FEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEIGE 251 (284)
T ss_dssp EECCCCBCGGGSCTTSCC-CSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEECCT
T ss_pred EEcCCCCCcccccChhhc-cCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEECc
Confidence 997 222 222 2337899999 999999999998654
No 206
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.02 E-value=3.2e-11 Score=106.76 Aligned_cols=92 Identities=15% Similarity=0.153 Sum_probs=71.1
Q ss_pred CCceeeccCcCCcccc--CCCCC-CCeEEEEeCCHHHHHhcCC---------CCcEEEeccCCCCC-CCC------CCCC
Q 022305 138 YSEVFPPSNTPGVSHF--PPGYK-QDRIVGMGMNEEELKRNPV---------LTEYVVQDLNLNPK-LPF------EDNS 198 (299)
Q Consensus 138 ~~~vLDiGcG~G~~~~--~~~~~-~~~v~gvD~S~~ml~~a~~---------~~~~~~~D~~~~~~-lpf------~~~~ 198 (299)
..+|||+|||+|...+ ....+ +.+|+++|+|+.|++.+++ +++++.+|. .. ++. ++++
T Consensus 80 ~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda---~~~l~~l~~~~~~~~~ 156 (247)
T 1sui_A 80 AKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPA---LPVLDEMIKDEKNHGS 156 (247)
T ss_dssp CCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCH---HHHHHHHHHSGGGTTC
T ss_pred cCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCH---HHHHHHHHhccCCCCC
Confidence 4689999999997333 22333 6899999999999987764 367888887 33 232 2678
Q ss_pred eeEEEecccccccCCHHHHHHHHHhhccCCcEEEEEe
Q 022305 199 FDVITNVVSVDYLTKPIEVFKEMCQVLKPGGLAIVSF 235 (299)
Q Consensus 199 FD~Vis~~~l~~~~d~~~~l~ei~rvLkpGG~lii~~ 235 (299)
||+|++... ..+...+++++.++|||||.++++.
T Consensus 157 fD~V~~d~~---~~~~~~~l~~~~~~LkpGG~lv~d~ 190 (247)
T 1sui_A 157 YDFIFVDAD---KDNYLNYHKRLIDLVKVGGVIGYDN 190 (247)
T ss_dssp BSEEEECSC---STTHHHHHHHHHHHBCTTCCEEEEC
T ss_pred EEEEEEcCc---hHHHHHHHHHHHHhCCCCeEEEEec
Confidence 999998753 4577899999999999999998863
No 207
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.01 E-value=1.6e-11 Score=113.59 Aligned_cols=97 Identities=11% Similarity=0.137 Sum_probs=72.6
Q ss_pred CCceeeccCcCCccccCCCCCCCeEEEEeCCHHHHHhcCCC----------CcEEEeccCCCCCCCC----CCCCeeEEE
Q 022305 138 YSEVFPPSNTPGVSHFPPGYKQDRIVGMGMNEEELKRNPVL----------TEYVVQDLNLNPKLPF----EDNSFDVIT 203 (299)
Q Consensus 138 ~~~vLDiGcG~G~~~~~~~~~~~~v~gvD~S~~ml~~a~~~----------~~~~~~D~~~~~~lpf----~~~~FD~Vi 203 (299)
..+|||+|||+|...+.....+.+|+|+|+|+.|++.++++ ++++++|+ .++.. .+++||+|+
T Consensus 154 ~~~VLDlgcGtG~~sl~la~~ga~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~---~~~l~~~~~~~~~fD~Ii 230 (332)
T 2igt_A 154 PLKVLNLFGYTGVASLVAAAAGAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDA---MKFIQREERRGSTYDIIL 230 (332)
T ss_dssp CCEEEEETCTTCHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCH---HHHHHHHHHHTCCBSEEE
T ss_pred CCcEEEcccccCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcH---HHHHHHHHhcCCCceEEE
Confidence 45899999999974444333456999999999999877642 57888887 44321 157899999
Q ss_pred ecc----------cccccCCHHHHHHHHHhhccCCcEEEEEecC
Q 022305 204 NVV----------SVDYLTKPIEVFKEMCQVLKPGGLAIVSFSN 237 (299)
Q Consensus 204 s~~----------~l~~~~d~~~~l~ei~rvLkpGG~lii~~~~ 237 (299)
+.- ++++..+...+++++.++|||||.++++..+
T Consensus 231 ~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~ 274 (332)
T 2igt_A 231 TDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTAY 274 (332)
T ss_dssp ECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEEC
T ss_pred ECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEECC
Confidence 842 2334556789999999999999998887654
No 208
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.01 E-value=8e-11 Score=107.95 Aligned_cols=95 Identities=21% Similarity=0.242 Sum_probs=71.4
Q ss_pred CceeeccCcCCc--cccCCCCCCCeEEEEeCCHHHHHhcCC--------CCcEEEeccCCCCCC--CCCCCCeeEEEecc
Q 022305 139 SEVFPPSNTPGV--SHFPPGYKQDRIVGMGMNEEELKRNPV--------LTEYVVQDLNLNPKL--PFEDNSFDVITNVV 206 (299)
Q Consensus 139 ~~vLDiGcG~G~--~~~~~~~~~~~v~gvD~S~~ml~~a~~--------~~~~~~~D~~~~~~l--pf~~~~FD~Vis~~ 206 (299)
.+|||+|||.|. ..+...+++.++++||+++.|++.+++ +++++++|. ..+ .+++++||+|++..
T Consensus 91 ~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da---~~~l~~~~~~~fDvIi~D~ 167 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIPRAPRVKIRVDDA---RMVAESFTPASRDVIIRDV 167 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCH---HHHHHTCCTTCEEEEEECC
T ss_pred CEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccccCCCceEEEECcH---HHHHhhccCCCCCEEEECC
Confidence 389999999996 223333567899999999999998764 367888887 443 24568999999864
Q ss_pred ccccc-C---CHHHHHHHHHhhccCCcEEEEEec
Q 022305 207 SVDYL-T---KPIEVFKEMCQVLKPGGLAIVSFS 236 (299)
Q Consensus 207 ~l~~~-~---d~~~~l~ei~rvLkpGG~lii~~~ 236 (299)
..++. + ...+++++++++|||||.+++...
T Consensus 168 ~~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~~ 201 (317)
T 3gjy_A 168 FAGAITPQNFTTVEFFEHCHRGLAPGGLYVANCG 201 (317)
T ss_dssp STTSCCCGGGSBHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCccccchhhhHHHHHHHHHHhcCCCcEEEEEec
Confidence 33321 1 126899999999999999988754
No 209
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.01 E-value=7.9e-11 Score=114.08 Aligned_cols=93 Identities=14% Similarity=0.148 Sum_probs=72.3
Q ss_pred CCceeeccCcCCccccC-CCCCCCeEEEEeCCHHHHHhcCC---------CCcEEEeccCCCCCCCCCCCCeeEEEeccc
Q 022305 138 YSEVFPPSNTPGVSHFP-PGYKQDRIVGMGMNEEELKRNPV---------LTEYVVQDLNLNPKLPFEDNSFDVITNVVS 207 (299)
Q Consensus 138 ~~~vLDiGcG~G~~~~~-~~~~~~~v~gvD~S~~ml~~a~~---------~~~~~~~D~~~~~~lpf~~~~FD~Vis~~~ 207 (299)
..+|||+|||+|...+. ...+..+|+|+|+|+ |++.|++ +++++.+|+ ++++++ ++||+|+|...
T Consensus 159 ~~~VLDiGcGtG~la~~la~~~~~~V~gvD~s~-~l~~A~~~~~~~gl~~~v~~~~~d~---~~~~~~-~~fD~Ivs~~~ 233 (480)
T 3b3j_A 159 DKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKV---EEVSLP-EQVDIIISEPM 233 (480)
T ss_dssp TCEEEEESCSTTHHHHHHHHTTCSEEEEEECHH-HHHHHHHHHHHTTCTTTEEEEESCT---TTCCCS-SCEEEEECCCC
T ss_pred CCEEEEecCcccHHHHHHHHcCCCEEEEEEcHH-HHHHHHHHHHHcCCCCcEEEEECch---hhCccC-CCeEEEEEeCc
Confidence 46899999999973322 223456999999998 8876643 378999999 676665 57999999888
Q ss_pred ccccC--CHHHHHHHHHhhccCCcEEEEEe
Q 022305 208 VDYLT--KPIEVFKEMCQVLKPGGLAIVSF 235 (299)
Q Consensus 208 l~~~~--d~~~~l~ei~rvLkpGG~lii~~ 235 (299)
++|+. +....+.++.++|||||.++++.
T Consensus 234 ~~~~~~e~~~~~l~~~~~~LkpgG~li~~~ 263 (480)
T 3b3j_A 234 GYMLFNERMLESYLHAKKYLKPSGNMFPTI 263 (480)
T ss_dssp HHHHTCHHHHHHHHHGGGGEEEEEEEESCE
T ss_pred hHhcCcHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 77775 34678889999999999998654
No 210
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.01 E-value=3.5e-10 Score=101.95 Aligned_cols=95 Identities=13% Similarity=0.124 Sum_probs=68.7
Q ss_pred cCCceeeccCcCCc--cccCCCCCCCeEEEEeCCHHHHHhcCC------------------CCcEEEeccCCCCC-CCCC
Q 022305 137 YYSEVFPPSNTPGV--SHFPPGYKQDRIVGMGMNEEELKRNPV------------------LTEYVVQDLNLNPK-LPFE 195 (299)
Q Consensus 137 ~~~~vLDiGcG~G~--~~~~~~~~~~~v~gvD~S~~ml~~a~~------------------~~~~~~~D~~~~~~-lpf~ 195 (299)
...+|||+|||+|. ..+... +..+++++|+++.|++.|++ +++++.+|+ .. ++.
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~D~---~~~l~~- 149 (281)
T 1mjf_A 75 KPKRVLVIGGGDGGTVREVLQH-DVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDG---FEFIKN- 149 (281)
T ss_dssp CCCEEEEEECTTSHHHHHHTTS-CCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCH---HHHHHH-
T ss_pred CCCeEEEEcCCcCHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEECch---HHHhcc-
Confidence 34789999999996 223333 56799999999999986542 356777876 32 233
Q ss_pred CCCeeEEEecccccccC--C--HHHHHHHHHhhccCCcEEEEEec
Q 022305 196 DNSFDVITNVVSVDYLT--K--PIEVFKEMCQVLKPGGLAIVSFS 236 (299)
Q Consensus 196 ~~~FD~Vis~~~l~~~~--d--~~~~l~ei~rvLkpGG~lii~~~ 236 (299)
+++||+|++....++-+ . ..++++++.++|||||.+++...
T Consensus 150 ~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~ 194 (281)
T 1mjf_A 150 NRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQAG 194 (281)
T ss_dssp CCCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcC
Confidence 67899999865432211 1 26789999999999999998754
No 211
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.01 E-value=1.5e-10 Score=106.21 Aligned_cols=97 Identities=14% Similarity=0.171 Sum_probs=72.7
Q ss_pred cCCceeeccCcCCc--cccCCCCCCCeEEEEeCCHHHHHhcCC-------------CCcEEEeccCCCCC-CCCCCCCee
Q 022305 137 YYSEVFPPSNTPGV--SHFPPGYKQDRIVGMGMNEEELKRNPV-------------LTEYVVQDLNLNPK-LPFEDNSFD 200 (299)
Q Consensus 137 ~~~~vLDiGcG~G~--~~~~~~~~~~~v~gvD~S~~ml~~a~~-------------~~~~~~~D~~~~~~-lpf~~~~FD 200 (299)
...+|||+|||+|. ..+....+..+++++|+++.|++.+++ +++++.+|+ .. ++..+++||
T Consensus 77 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~---~~~l~~~~~~fD 153 (314)
T 1uir_A 77 EPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDA---RAYLERTEERYD 153 (314)
T ss_dssp CCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCH---HHHHHHCCCCEE
T ss_pred CCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchH---HHHHHhcCCCcc
Confidence 45789999999996 333333356799999999999986543 367888887 44 344578899
Q ss_pred EEEecccccc-cCC------HHHHHHHHHhhccCCcEEEEEec
Q 022305 201 VITNVVSVDY-LTK------PIEVFKEMCQVLKPGGLAIVSFS 236 (299)
Q Consensus 201 ~Vis~~~l~~-~~d------~~~~l~ei~rvLkpGG~lii~~~ 236 (299)
+|++....++ ... ..++++++.++|||||.+++...
T Consensus 154 ~Ii~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 196 (314)
T 1uir_A 154 VVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQTG 196 (314)
T ss_dssp EEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEEE
T ss_pred EEEECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEcc
Confidence 9999866544 111 37899999999999999988643
No 212
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.00 E-value=3.4e-10 Score=101.20 Aligned_cols=88 Identities=16% Similarity=0.024 Sum_probs=68.9
Q ss_pred cCCceeeccCcCCcc--ccCCCCCCCeEEEEeCCHHHHHhcCCC------------CcEEEeccCCCCCCCCCCCCeeEE
Q 022305 137 YYSEVFPPSNTPGVS--HFPPGYKQDRIVGMGMNEEELKRNPVL------------TEYVVQDLNLNPKLPFEDNSFDVI 202 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~--~~~~~~~~~~v~gvD~S~~ml~~a~~~------------~~~~~~D~~~~~~lpf~~~~FD~V 202 (299)
...+|||+|||+|.. .+... + .+|+++|+++.|++.|++. ++++.+|. .... ++||+|
T Consensus 72 ~~~~VL~iG~G~G~~~~~ll~~-~-~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~---~~~~---~~fD~I 143 (262)
T 2cmg_A 72 ELKEVLIVDGFDLELAHQLFKY-D-THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLL---DLDI---KKYDLI 143 (262)
T ss_dssp CCCEEEEESSCCHHHHHHHTTS-S-CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGG---GSCC---CCEEEE
T ss_pred CCCEEEEEeCCcCHHHHHHHhC-C-CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechH---HHHH---hhCCEE
Confidence 346899999999862 23333 5 8999999999999988753 45667777 4433 789999
Q ss_pred EecccccccCCHHHHHHHHHhhccCCcEEEEEecC
Q 022305 203 TNVVSVDYLTKPIEVFKEMCQVLKPGGLAIVSFSN 237 (299)
Q Consensus 203 is~~~l~~~~d~~~~l~ei~rvLkpGG~lii~~~~ 237 (299)
++. ..++..+++++.++|||||.+++...+
T Consensus 144 i~d-----~~dp~~~~~~~~~~L~pgG~lv~~~~~ 173 (262)
T 2cmg_A 144 FCL-----QEPDIHRIDGLKRMLKEDGVFISVAKH 173 (262)
T ss_dssp EES-----SCCCHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred EEC-----CCChHHHHHHHHHhcCCCcEEEEEcCC
Confidence 986 356777999999999999999987544
No 213
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.00 E-value=2.6e-10 Score=103.71 Aligned_cols=98 Identities=13% Similarity=0.063 Sum_probs=70.0
Q ss_pred cCCceeeccCcCCc--cccCCCCCCCeEEEEeCCHHHHHhcCC------------CCcEEEeccCCCCC-CCCCCCCeeE
Q 022305 137 YYSEVFPPSNTPGV--SHFPPGYKQDRIVGMGMNEEELKRNPV------------LTEYVVQDLNLNPK-LPFEDNSFDV 201 (299)
Q Consensus 137 ~~~~vLDiGcG~G~--~~~~~~~~~~~v~gvD~S~~ml~~a~~------------~~~~~~~D~~~~~~-lpf~~~~FD~ 201 (299)
...+|||+|||+|. ..+....+..+|+++|+|+.+++.+++ +++++.+|+ .. ++..+++||+
T Consensus 90 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~---~~~l~~~~~~fD~ 166 (296)
T 1inl_A 90 NPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANG---AEYVRKFKNEFDV 166 (296)
T ss_dssp SCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCH---HHHGGGCSSCEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcH---HHHHhhCCCCceE
Confidence 34789999999996 233333356899999999999986543 367788887 33 3445678999
Q ss_pred EEecccccccC-----CHHHHHHHHHhhccCCcEEEEEecC
Q 022305 202 ITNVVSVDYLT-----KPIEVFKEMCQVLKPGGLAIVSFSN 237 (299)
Q Consensus 202 Vis~~~l~~~~-----d~~~~l~ei~rvLkpGG~lii~~~~ 237 (299)
|++...-+++. ...++++++.++|||||.+++...+
T Consensus 167 Ii~d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 207 (296)
T 1inl_A 167 IIIDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAETED 207 (296)
T ss_dssp EEEEC----------CCSHHHHHHHHHHEEEEEEEEEECCC
T ss_pred EEEcCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEccC
Confidence 99854322121 2278999999999999999997654
No 214
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.00 E-value=2.6e-10 Score=96.87 Aligned_cols=83 Identities=7% Similarity=0.126 Sum_probs=62.1
Q ss_pred cCCceeeccCcCCccccCCCC-CCCeEEEEeCCHHHHHhcCC---CCcEEEeccCCCCCCCCCCCCeeEEEecccccccC
Q 022305 137 YYSEVFPPSNTPGVSHFPPGY-KQDRIVGMGMNEEELKRNPV---LTEYVVQDLNLNPKLPFEDNSFDVITNVVSVDYLT 212 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~~~~~~~-~~~~v~gvD~S~~ml~~a~~---~~~~~~~D~~~~~~lpf~~~~FD~Vis~~~l~~~~ 212 (299)
...+|||+|||+|........ ...+|+|+|+|+.|++.+++ +++++++|+ ..++ ++||+|+++..++|..
T Consensus 51 ~~~~vlD~gcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~d~---~~~~---~~~D~v~~~~p~~~~~ 124 (200)
T 1ne2_A 51 GGRSVIDAGTGNGILACGSYLLGAESVTAFDIDPDAIETAKRNCGGVNFMVADV---SEIS---GKYDTWIMNPPFGSVV 124 (200)
T ss_dssp BTSEEEEETCTTCHHHHHHHHTTBSEEEEEESCHHHHHHHHHHCTTSEEEECCG---GGCC---CCEEEEEECCCC----
T ss_pred CCCEEEEEeCCccHHHHHHHHcCCCEEEEEECCHHHHHHHHHhcCCCEEEECcH---HHCC---CCeeEEEECCCchhcc
Confidence 446899999999973332221 33579999999999998776 488999999 6654 6899999999999986
Q ss_pred C--HHHHHHHHHhhc
Q 022305 213 K--PIEVFKEMCQVL 225 (299)
Q Consensus 213 d--~~~~l~ei~rvL 225 (299)
+ ..++++++.++|
T Consensus 125 ~~~~~~~l~~~~~~~ 139 (200)
T 1ne2_A 125 KHSDRAFIDKAFETS 139 (200)
T ss_dssp ---CHHHHHHHHHHE
T ss_pred CchhHHHHHHHHHhc
Confidence 4 357899999998
No 215
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=98.99 E-value=1.7e-10 Score=104.13 Aligned_cols=98 Identities=16% Similarity=0.174 Sum_probs=72.0
Q ss_pred cCCceeeccCcCCc--cccCCCCCCCeEEEEeCCHHHHHhcCC------------CCcEEEeccCCCCC-CCCCCCCeeE
Q 022305 137 YYSEVFPPSNTPGV--SHFPPGYKQDRIVGMGMNEEELKRNPV------------LTEYVVQDLNLNPK-LPFEDNSFDV 201 (299)
Q Consensus 137 ~~~~vLDiGcG~G~--~~~~~~~~~~~v~gvD~S~~ml~~a~~------------~~~~~~~D~~~~~~-lpf~~~~FD~ 201 (299)
...+|||+|||.|. ..+....+..+++++|+++.+++.+++ +++++.+|+ .. ++..+++||+
T Consensus 78 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~---~~~l~~~~~~fD~ 154 (283)
T 2i7c_A 78 EPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDA---SKFLENVTNTYDV 154 (283)
T ss_dssp SCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCH---HHHHHHCCSCEEE
T ss_pred CCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECCh---HHHHHhCCCCceE
Confidence 34689999999996 233333346899999999999986543 357888887 33 2333678999
Q ss_pred EEecccccccC--CH--HHHHHHHHhhccCCcEEEEEecC
Q 022305 202 ITNVVSVDYLT--KP--IEVFKEMCQVLKPGGLAIVSFSN 237 (299)
Q Consensus 202 Vis~~~l~~~~--d~--~~~l~ei~rvLkpGG~lii~~~~ 237 (299)
|++....++.+ +. .++++++.++|||||.+++...+
T Consensus 155 Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~ 194 (283)
T 2i7c_A 155 IIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCES 194 (283)
T ss_dssp EEEECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEECCC
T ss_pred EEEcCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEECCC
Confidence 99865433322 22 68999999999999999997654
No 216
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.99 E-value=2.5e-10 Score=103.50 Aligned_cols=90 Identities=14% Similarity=0.072 Sum_probs=65.8
Q ss_pred CCceeeccCcC------CccccCCCCC-CCeEEEEeCCHHHHHhcCCCCcE-EEeccCCCCCCCCCCCCeeEEEeccccc
Q 022305 138 YSEVFPPSNTP------GVSHFPPGYK-QDRIVGMGMNEEELKRNPVLTEY-VVQDLNLNPKLPFEDNSFDVITNVVSVD 209 (299)
Q Consensus 138 ~~~vLDiGcG~------G~~~~~~~~~-~~~v~gvD~S~~ml~~a~~~~~~-~~~D~~~~~~lpf~~~~FD~Vis~~~l~ 209 (299)
..+|||+|||+ |...+....+ +.+|+|+|+|+. + .++++ +++|+ ..++++ ++||+|+|+...+
T Consensus 64 g~~VLDLGcGsg~~~GpGs~~~a~~~~~~~~V~gvDis~~-v----~~v~~~i~gD~---~~~~~~-~~fD~Vvsn~~~~ 134 (290)
T 2xyq_A 64 NMRVIHFGAGSDKGVAPGTAVLRQWLPTGTLLVDSDLNDF-V----SDADSTLIGDC---ATVHTA-NKWDLIISDMYDP 134 (290)
T ss_dssp TCEEEEESCCCTTSBCHHHHHHHHHSCTTCEEEEEESSCC-B----CSSSEEEESCG---GGCCCS-SCEEEEEECCCCC
T ss_pred CCEEEEeCCCCCCCCCcHHHHHHHHcCCCCEEEEEECCCC-C----CCCEEEEECcc---ccCCcc-CcccEEEEcCCcc
Confidence 45899999965 4311222223 589999999998 2 35889 99999 677664 6799999975422
Q ss_pred c-----------cCCHHHHHHHHHhhccCCcEEEEEec
Q 022305 210 Y-----------LTKPIEVFKEMCQVLKPGGLAIVSFS 236 (299)
Q Consensus 210 ~-----------~~d~~~~l~ei~rvLkpGG~lii~~~ 236 (299)
+ ......+++++.|+|||||.|++.+.
T Consensus 135 ~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~ 172 (290)
T 2xyq_A 135 RTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKIT 172 (290)
T ss_dssp C---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred ccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 2 11235899999999999999999754
No 217
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=98.98 E-value=1.8e-10 Score=108.08 Aligned_cols=92 Identities=12% Similarity=0.095 Sum_probs=70.4
Q ss_pred CCceeeccCcCCccccCCCCCC-CeEEEEeCCHHHHHhcCC---------CCcEEEeccCCCCCCCCCCCCeeEEEec--
Q 022305 138 YSEVFPPSNTPGVSHFPPGYKQ-DRIVGMGMNEEELKRNPV---------LTEYVVQDLNLNPKLPFEDNSFDVITNV-- 205 (299)
Q Consensus 138 ~~~vLDiGcG~G~~~~~~~~~~-~~v~gvD~S~~ml~~a~~---------~~~~~~~D~~~~~~lpf~~~~FD~Vis~-- 205 (299)
-+.|||+|||+|...+.....+ .+|+|||.|+ |++.|++ +++++.+|+ +.+.++ ++||+|+|-
T Consensus 84 ~k~VLDvG~GtGiLs~~Aa~aGA~~V~ave~s~-~~~~a~~~~~~n~~~~~i~~i~~~~---~~~~lp-e~~DvivsE~~ 158 (376)
T 4hc4_A 84 GKTVLDVGAGTGILSIFCAQAGARRVYAVEASA-IWQQAREVVRFNGLEDRVHVLPGPV---ETVELP-EQVDAIVSEWM 158 (376)
T ss_dssp TCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-THHHHHHHHHHTTCTTTEEEEESCT---TTCCCS-SCEEEEECCCC
T ss_pred CCEEEEeCCCccHHHHHHHHhCCCEEEEEeChH-HHHHHHHHHHHcCCCceEEEEeeee---eeecCC-ccccEEEeecc
Confidence 3579999999997433333334 5899999996 7776543 388999999 778776 579999984
Q ss_pred -ccccccCCHHHHHHHHHhhccCCcEEEEE
Q 022305 206 -VSVDYLTKPIEVFKEMCQVLKPGGLAIVS 234 (299)
Q Consensus 206 -~~l~~~~d~~~~l~ei~rvLkpGG~lii~ 234 (299)
..+.+-.....++....|.|||||.++-+
T Consensus 159 ~~~l~~e~~l~~~l~a~~r~Lkp~G~~iP~ 188 (376)
T 4hc4_A 159 GYGLLHESMLSSVLHARTKWLKEGGLLLPA 188 (376)
T ss_dssp BTTBTTTCSHHHHHHHHHHHEEEEEEEESC
T ss_pred cccccccchhhhHHHHHHhhCCCCceECCc
Confidence 44555567899999999999999988643
No 218
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=98.98 E-value=1.2e-10 Score=104.50 Aligned_cols=93 Identities=12% Similarity=0.002 Sum_probs=72.8
Q ss_pred cCCceeeccCcCCccccCCCC--CCCeEEEEeCCHHHHHhcCC--------CCcEEEeccCCCCCCCCCCCCeeEEEecc
Q 022305 137 YYSEVFPPSNTPGVSHFPPGY--KQDRIVGMGMNEEELKRNPV--------LTEYVVQDLNLNPKLPFEDNSFDVITNVV 206 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~~~~~~~--~~~~v~gvD~S~~ml~~a~~--------~~~~~~~D~~~~~~lpf~~~~FD~Vis~~ 206 (299)
...+|||+|||+|...+.... +..+|+|+|+|+.|++.+++ ++.++.+|+ ..++. +++||+|++..
T Consensus 119 ~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~---~~~~~-~~~~D~Vi~d~ 194 (272)
T 3a27_A 119 ENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADN---RDVEL-KDVADRVIMGY 194 (272)
T ss_dssp TTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCG---GGCCC-TTCEEEEEECC
T ss_pred CCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECCh---HHcCc-cCCceEEEECC
Confidence 346899999999974443322 35699999999999987764 367899999 55544 67899999886
Q ss_pred cccccCCHHHHHHHHHhhccCCcEEEEEecC
Q 022305 207 SVDYLTKPIEVFKEMCQVLKPGGLAIVSFSN 237 (299)
Q Consensus 207 ~l~~~~d~~~~l~ei~rvLkpGG~lii~~~~ 237 (299)
.. +..+++.++.++|||||.++++...
T Consensus 195 p~----~~~~~l~~~~~~LkpgG~l~~s~~~ 221 (272)
T 3a27_A 195 VH----KTHKFLDKTFEFLKDRGVIHYHETV 221 (272)
T ss_dssp CS----SGGGGHHHHHHHEEEEEEEEEEEEE
T ss_pred cc----cHHHHHHHHHHHcCCCCEEEEEEcC
Confidence 43 6778999999999999999887543
No 219
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=98.98 E-value=2e-10 Score=104.95 Aligned_cols=98 Identities=15% Similarity=0.068 Sum_probs=70.0
Q ss_pred cCCceeeccCcCCcc--ccCCCCCCCeEEEEeCCHHHHHhcCC------------CCcEEEeccCCCCC-CCCCCCCeeE
Q 022305 137 YYSEVFPPSNTPGVS--HFPPGYKQDRIVGMGMNEEELKRNPV------------LTEYVVQDLNLNPK-LPFEDNSFDV 201 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~--~~~~~~~~~~v~gvD~S~~ml~~a~~------------~~~~~~~D~~~~~~-lpf~~~~FD~ 201 (299)
...+|||+|||+|.. .+....+..+++++|+++.|++.+++ +++++.+|+ .. ++..+++||+
T Consensus 95 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da---~~~l~~~~~~fD~ 171 (304)
T 2o07_A 95 NPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDG---FEFMKQNQDAFDV 171 (304)
T ss_dssp SCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCH---HHHHHTCSSCEEE
T ss_pred CCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcH---HHHHhhCCCCceE
Confidence 346899999999963 33333345899999999999986653 367788887 33 3445688999
Q ss_pred EEecccccccC----CHHHHHHHHHhhccCCcEEEEEecC
Q 022305 202 ITNVVSVDYLT----KPIEVFKEMCQVLKPGGLAIVSFSN 237 (299)
Q Consensus 202 Vis~~~l~~~~----d~~~~l~ei~rvLkpGG~lii~~~~ 237 (299)
|++....+..+ ...++++++.++|||||.+++...+
T Consensus 172 Ii~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 211 (304)
T 2o07_A 172 IITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQGEC 211 (304)
T ss_dssp EEEECC-----------CHHHHHHHHHEEEEEEEEEEEEC
T ss_pred EEECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEecCC
Confidence 99865433221 1257899999999999999987643
No 220
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=98.97 E-value=2.8e-10 Score=106.72 Aligned_cols=96 Identities=15% Similarity=0.195 Sum_probs=69.5
Q ss_pred hcCCceeeccCcCCccccCCCC--CCCeEEEEeCCHHHHHhcCC---------CCcEEEeccCCCCCCCCCCCCeeEEEe
Q 022305 136 KYYSEVFPPSNTPGVSHFPPGY--KQDRIVGMGMNEEELKRNPV---------LTEYVVQDLNLNPKLPFEDNSFDVITN 204 (299)
Q Consensus 136 ~~~~~vLDiGcG~G~~~~~~~~--~~~~v~gvD~S~~ml~~a~~---------~~~~~~~D~~~~~~lpf~~~~FD~Vis 204 (299)
....+|||+|||+|+..+.... ...+|+|+|+|+.|++.|++ +++++++|+ .++++++++||+|++
T Consensus 216 ~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~---~~~~~~~~~fD~Ii~ 292 (373)
T 3tm4_A 216 LDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDA---TQLSQYVDSVDFAIS 292 (373)
T ss_dssp CCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCG---GGGGGTCSCEEEEEE
T ss_pred CCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECCh---hhCCcccCCcCEEEE
Confidence 3456899999999974433222 23489999999999997764 378999999 888888899999999
Q ss_pred cccccc-------cCCH-HHHHHHHHhhccCCcEEEEEec
Q 022305 205 VVSVDY-------LTKP-IEVFKEMCQVLKPGGLAIVSFS 236 (299)
Q Consensus 205 ~~~l~~-------~~d~-~~~l~ei~rvLkpGG~lii~~~ 236 (299)
+-.+.. +.+. .++++++.|+| ||.+++.++
T Consensus 293 npPyg~r~~~~~~~~~ly~~~~~~l~r~l--~g~~~~i~~ 330 (373)
T 3tm4_A 293 NLPYGLKIGKKSMIPDLYMKFFNELAKVL--EKRGVFITT 330 (373)
T ss_dssp ECCCC------CCHHHHHHHHHHHHHHHE--EEEEEEEES
T ss_pred CCCCCcccCcchhHHHHHHHHHHHHHHHc--CCeEEEEEC
Confidence 744222 2222 67889999999 454444444
No 221
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=98.97 E-value=2.2e-10 Score=105.11 Aligned_cols=98 Identities=14% Similarity=0.046 Sum_probs=68.3
Q ss_pred cCCceeeccCcCCc--cccCCCCCCCeEEEEeCCHHHHHhcCC------------CCcEEEeccCCCCC-CCCCCCCeeE
Q 022305 137 YYSEVFPPSNTPGV--SHFPPGYKQDRIVGMGMNEEELKRNPV------------LTEYVVQDLNLNPK-LPFEDNSFDV 201 (299)
Q Consensus 137 ~~~~vLDiGcG~G~--~~~~~~~~~~~v~gvD~S~~ml~~a~~------------~~~~~~~D~~~~~~-lpf~~~~FD~ 201 (299)
...+|||+|||+|. ..+....+..+|+++|+++.|++.|++ +++++.+|+ .. ++..+++||+
T Consensus 108 ~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~---~~~l~~~~~~fD~ 184 (314)
T 2b2c_A 108 DPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDG---FEFLKNHKNEFDV 184 (314)
T ss_dssp SCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCH---HHHHHHCTTCEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChH---HHHHHhcCCCceE
Confidence 34789999999996 333333456899999999999986543 256777777 33 3345688999
Q ss_pred EEecccccccCC--H--HHHHHHHHhhccCCcEEEEEecC
Q 022305 202 ITNVVSVDYLTK--P--IEVFKEMCQVLKPGGLAIVSFSN 237 (299)
Q Consensus 202 Vis~~~l~~~~d--~--~~~l~ei~rvLkpGG~lii~~~~ 237 (299)
|++...-+.-+. . .++++++.++|||||.+++...+
T Consensus 185 Ii~d~~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~~~ 224 (314)
T 2b2c_A 185 IITDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQGES 224 (314)
T ss_dssp EEECCC-------------HHHHHHHHEEEEEEEEEECCC
T ss_pred EEEcCCCCCCcchhhhHHHHHHHHHhhcCCCeEEEEECCC
Confidence 998653222121 1 68899999999999999997543
No 222
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=98.96 E-value=1.1e-10 Score=102.22 Aligned_cols=93 Identities=17% Similarity=0.164 Sum_probs=70.3
Q ss_pred cCCceeeccCcCCcccc--CCCCC-CCeEEEEeCCHHHHHhcCCC---------CcEEEeccCCCCC-CC----------
Q 022305 137 YYSEVFPPSNTPGVSHF--PPGYK-QDRIVGMGMNEEELKRNPVL---------TEYVVQDLNLNPK-LP---------- 193 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~~~--~~~~~-~~~v~gvD~S~~ml~~a~~~---------~~~~~~D~~~~~~-lp---------- 193 (299)
...+|||+|||+|.... ....+ +.+|+++|+++.+++.++++ ++++.+|+ .. ++
T Consensus 60 ~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~---~~~~~~~~~~~~~~~ 136 (239)
T 2hnk_A 60 GAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSA---LETLQVLIDSKSAPS 136 (239)
T ss_dssp TCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCH---HHHHHHHHHCSSCCG
T ss_pred CcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCH---HHHHHHHHhhccccc
Confidence 45789999999996332 22233 67999999999999877652 67888886 22 22
Q ss_pred ----CCC--CCeeEEEecccccccCCHHHHHHHHHhhccCCcEEEEEe
Q 022305 194 ----FED--NSFDVITNVVSVDYLTKPIEVFKEMCQVLKPGGLAIVSF 235 (299)
Q Consensus 194 ----f~~--~~FD~Vis~~~l~~~~d~~~~l~ei~rvLkpGG~lii~~ 235 (299)
|++ ++||+|++... ..+...+++++.++|||||.+++..
T Consensus 137 ~~~~f~~~~~~fD~I~~~~~---~~~~~~~l~~~~~~L~pgG~lv~~~ 181 (239)
T 2hnk_A 137 WASDFAFGPSSIDLFFLDAD---KENYPNYYPLILKLLKPGGLLIADN 181 (239)
T ss_dssp GGTTTCCSTTCEEEEEECSC---GGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred ccccccCCCCCcCEEEEeCC---HHHHHHHHHHHHHHcCCCeEEEEEc
Confidence 333 78999998854 3456789999999999999999864
No 223
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=98.94 E-value=3.6e-10 Score=108.78 Aligned_cols=98 Identities=11% Similarity=0.097 Sum_probs=70.8
Q ss_pred cCCceeeccCcCCc--cccCCCCC-CCeEEEEeCCHHHHHhcCCC-------CcEEEeccCCCCCCC-CCCCCeeEEEec
Q 022305 137 YYSEVFPPSNTPGV--SHFPPGYK-QDRIVGMGMNEEELKRNPVL-------TEYVVQDLNLNPKLP-FEDNSFDVITNV 205 (299)
Q Consensus 137 ~~~~vLDiGcG~G~--~~~~~~~~-~~~v~gvD~S~~ml~~a~~~-------~~~~~~D~~~~~~lp-f~~~~FD~Vis~ 205 (299)
...+|||+|||+|. .+++...+ .++|+++|+|+.+++.++++ +.++.+|+ ..++ +.+++||+|++.
T Consensus 101 ~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~v~~~~~Da---~~l~~~~~~~FD~Il~D 177 (464)
T 3m6w_A 101 PGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAPLAVTQAPP---RALAEAFGTYFHRVLLD 177 (464)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCCCEEECSCH---HHHHHHHCSCEEEEEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCeEEEEECCH---HHhhhhccccCCEEEEC
Confidence 45689999999996 33333333 37999999999999877653 66777887 5554 346889999951
Q ss_pred ------ccccccCCH----------------HHHHHHHHhhccCCcEEEEEecC
Q 022305 206 ------VSVDYLTKP----------------IEVFKEMCQVLKPGGLAIVSFSN 237 (299)
Q Consensus 206 ------~~l~~~~d~----------------~~~l~ei~rvLkpGG~lii~~~~ 237 (299)
.++.+-++. .++|+++.++|||||.+++++..
T Consensus 178 ~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs 231 (464)
T 3m6w_A 178 APCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCT 231 (464)
T ss_dssp CCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESC
T ss_pred CCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEecc
Confidence 223222322 67899999999999999987643
No 224
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=98.94 E-value=7.8e-11 Score=103.96 Aligned_cols=135 Identities=5% Similarity=-0.041 Sum_probs=79.7
Q ss_pred CCceeeccCcCCccc--cCCCCCCCeEEEEeCCHHHHHhcCCC---------CcEEEeccCCCCCC---CCC---CCCee
Q 022305 138 YSEVFPPSNTPGVSH--FPPGYKQDRIVGMGMNEEELKRNPVL---------TEYVVQDLNLNPKL---PFE---DNSFD 200 (299)
Q Consensus 138 ~~~vLDiGcG~G~~~--~~~~~~~~~v~gvD~S~~ml~~a~~~---------~~~~~~D~~~~~~l---pf~---~~~FD 200 (299)
..+|||+|||+|... +....++.+|+|+|+|+.|++.|+++ ++++++|+ ... +++ +++||
T Consensus 66 ~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~---~~~~~~~~~~~~~~~fD 142 (254)
T 2h00_A 66 LRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQ---KTLLMDALKEESEIIYD 142 (254)
T ss_dssp CCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCT---TCSSTTTSTTCCSCCBS
T ss_pred CCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcch---hhhhhhhhhcccCCccc
Confidence 358999999999632 22223468999999999999877542 68899997 441 344 36899
Q ss_pred EEEecccccccC---------------CHHHHHHHHHhhccCCcEEEEEecCcchHHHHHHhhhh-------cCCCchhh
Q 022305 201 VITNVVSVDYLT---------------KPIEVFKEMCQVLKPGGLAIVSFSNRCFWTKAISIWTS-------TGDADHVM 258 (299)
Q Consensus 201 ~Vis~~~l~~~~---------------d~~~~l~ei~rvLkpGG~lii~~~~~~~~~~~~~~~~~-------~~~~~~~~ 258 (299)
+|+++-.+++.. ....++.+++|+|||||.+.+... ........... .+......
T Consensus 143 ~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~~~~---~~~~~~~~l~~~g~~~~~~~~~~~~~ 219 (254)
T 2h00_A 143 FCMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVKR---IIHDSLQLKKRLRWYSCMLGKKCSLA 219 (254)
T ss_dssp EEEECCCCC-------------------------CTTTTHHHHTHHHHHHH---HHHHHHHHGGGBSCEEEEESSTTSHH
T ss_pred EEEECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEEEHH---HHHHHHhcccceEEEEECCCChhHHH
Confidence 999985444332 112457889999999997654311 11111111111 11112222
Q ss_pred hHHHHHHHhCCCCCCeeeecC
Q 022305 259 IVGAYFHYAGGYEPPQAVDIS 279 (299)
Q Consensus 259 ~~~~~~~~~aGF~~v~~~~~~ 279 (299)
.+.+.+ +++||+.+++....
T Consensus 220 ~~~~~l-~~~Gf~~v~~~~~~ 239 (254)
T 2h00_A 220 PLKEEL-RIQGVPKVTYTEFC 239 (254)
T ss_dssp HHHHHH-HHTTCSEEEEEEEE
T ss_pred HHHHHH-HHcCCCceEEEEEe
Confidence 333344 56999999887765
No 225
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=98.93 E-value=2.5e-10 Score=98.80 Aligned_cols=93 Identities=14% Similarity=0.167 Sum_probs=70.1
Q ss_pred cCCceeeccCcCCcc--ccCCCCC-CCeEEEEeCCHHHHHhcCC---------CCcEEEeccCCCCCC-C-CC--C--CC
Q 022305 137 YYSEVFPPSNTPGVS--HFPPGYK-QDRIVGMGMNEEELKRNPV---------LTEYVVQDLNLNPKL-P-FE--D--NS 198 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~--~~~~~~~-~~~v~gvD~S~~ml~~a~~---------~~~~~~~D~~~~~~l-p-f~--~--~~ 198 (299)
...+|||+|||+|.. .+....+ +.+++++|+|+.+++.+++ +++++.+|+ ... + +. . ++
T Consensus 69 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~---~~~~~~~~~~~~~~~ 145 (229)
T 2avd_A 69 QAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPA---LETLDELLAAGEAGT 145 (229)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCH---HHHHHHHHHTTCTTC
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCH---HHHHHHHHhcCCCCC
Confidence 346899999999963 3333333 6899999999999987653 367888887 322 1 21 1 78
Q ss_pred eeEEEecccccccCCHHHHHHHHHhhccCCcEEEEEe
Q 022305 199 FDVITNVVSVDYLTKPIEVFKEMCQVLKPGGLAIVSF 235 (299)
Q Consensus 199 FD~Vis~~~l~~~~d~~~~l~ei~rvLkpGG~lii~~ 235 (299)
||+|++... ..+...+++++.++|||||.+++..
T Consensus 146 ~D~v~~d~~---~~~~~~~l~~~~~~L~pgG~lv~~~ 179 (229)
T 2avd_A 146 FDVAVVDAD---KENCSAYYERCLQLLRPGGILAVLR 179 (229)
T ss_dssp EEEEEECSC---STTHHHHHHHHHHHEEEEEEEEEEC
T ss_pred ccEEEECCC---HHHHHHHHHHHHHHcCCCeEEEEEC
Confidence 999998654 4467889999999999999998863
No 226
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=98.91 E-value=2.6e-09 Score=103.33 Aligned_cols=98 Identities=16% Similarity=0.145 Sum_probs=71.1
Q ss_pred cCCceeeccCcCCc--cccCCCC-CCCeEEEEeCCHHHHHhcCC--------CCcEEEeccCCCCCCCC-CCCCeeEEEe
Q 022305 137 YYSEVFPPSNTPGV--SHFPPGY-KQDRIVGMGMNEEELKRNPV--------LTEYVVQDLNLNPKLPF-EDNSFDVITN 204 (299)
Q Consensus 137 ~~~~vLDiGcG~G~--~~~~~~~-~~~~v~gvD~S~~ml~~a~~--------~~~~~~~D~~~~~~lpf-~~~~FD~Vis 204 (299)
...+|||+|||+|. .+++... ....|+++|+|+.+++.+++ +++++++|+ ..++. .+++||+|++
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~nv~~~~~D~---~~~~~~~~~~fD~Il~ 193 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGISNVALTHFDG---RVFGAAVPEMFDAILL 193 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCCS---TTHHHHSTTCEEEEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCCH---HHhhhhccccCCEEEE
Confidence 45689999999996 3333332 24799999999999987654 366788888 66653 5678999997
Q ss_pred c------ccccccCC----------------HHHHHHHHHhhccCCcEEEEEecC
Q 022305 205 V------VSVDYLTK----------------PIEVFKEMCQVLKPGGLAIVSFSN 237 (299)
Q Consensus 205 ~------~~l~~~~d----------------~~~~l~ei~rvLkpGG~lii~~~~ 237 (299)
. .++.+.++ ..++|+++.++|||||.+++++..
T Consensus 194 D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs 248 (479)
T 2frx_A 194 DAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCT 248 (479)
T ss_dssp ECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESC
T ss_pred CCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEeccc
Confidence 2 22332222 246899999999999999987653
No 227
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=98.91 E-value=1.5e-10 Score=101.67 Aligned_cols=93 Identities=13% Similarity=0.165 Sum_probs=70.6
Q ss_pred cCCceeeccCcCCcccc--CCCCC-CCeEEEEeCCHHHHHhcCC---------CCcEEEeccCCCCC-CC-C-----CCC
Q 022305 137 YYSEVFPPSNTPGVSHF--PPGYK-QDRIVGMGMNEEELKRNPV---------LTEYVVQDLNLNPK-LP-F-----EDN 197 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~~~--~~~~~-~~~v~gvD~S~~ml~~a~~---------~~~~~~~D~~~~~~-lp-f-----~~~ 197 (299)
...+|||+|||+|...+ ....+ +.+++++|+|+.+++.+++ +++++.+|. .. ++ + +++
T Consensus 70 ~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda---~~~l~~l~~~~~~~~ 146 (237)
T 3c3y_A 70 NAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDA---MLALDNLLQGQESEG 146 (237)
T ss_dssp TCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCH---HHHHHHHHHSTTCTT
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCH---HHHHHHHHhccCCCC
Confidence 34689999999997333 23333 6899999999999987754 367888887 33 22 2 257
Q ss_pred CeeEEEecccccccCCHHHHHHHHHhhccCCcEEEEEe
Q 022305 198 SFDVITNVVSVDYLTKPIEVFKEMCQVLKPGGLAIVSF 235 (299)
Q Consensus 198 ~FD~Vis~~~l~~~~d~~~~l~ei~rvLkpGG~lii~~ 235 (299)
+||+|++... ..+...+++++.++|||||.++++.
T Consensus 147 ~fD~I~~d~~---~~~~~~~l~~~~~~L~pGG~lv~d~ 181 (237)
T 3c3y_A 147 SYDFGFVDAD---KPNYIKYHERLMKLVKVGGIVAYDN 181 (237)
T ss_dssp CEEEEEECSC---GGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred CcCEEEECCc---hHHHHHHHHHHHHhcCCCeEEEEec
Confidence 8999998642 3467889999999999999998863
No 228
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=98.90 E-value=8.3e-10 Score=103.43 Aligned_cols=95 Identities=16% Similarity=0.062 Sum_probs=72.6
Q ss_pred CCceeeccCcCCccccCCC--CCCCeEEEEeCCHHHHHhcCC--------CCcEEEeccCCCCC-CCC-CCCCeeEEEec
Q 022305 138 YSEVFPPSNTPGVSHFPPG--YKQDRIVGMGMNEEELKRNPV--------LTEYVVQDLNLNPK-LPF-EDNSFDVITNV 205 (299)
Q Consensus 138 ~~~vLDiGcG~G~~~~~~~--~~~~~v~gvD~S~~ml~~a~~--------~~~~~~~D~~~~~~-lpf-~~~~FD~Vis~ 205 (299)
..+|||+| |+|....... .+..+|+|+|+|+.|++.+++ +++++.+|+ .. +|. .+++||+|+++
T Consensus 173 ~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g~~~v~~~~~D~---~~~l~~~~~~~fD~Vi~~ 248 (373)
T 2qm3_A 173 NKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIGYEDIEIFTFDL---RKPLPDYALHKFDTFITD 248 (373)
T ss_dssp TCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHTCCCEEEECCCT---TSCCCTTTSSCBSEEEEC
T ss_pred CCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCEEEEEChh---hhhchhhccCCccEEEEC
Confidence 46899999 9997333222 234799999999999997765 377899998 55 664 45789999998
Q ss_pred ccccccCCHHHHHHHHHhhccCCc-EEEEEecC
Q 022305 206 VSVDYLTKPIEVFKEMCQVLKPGG-LAIVSFSN 237 (299)
Q Consensus 206 ~~l~~~~d~~~~l~ei~rvLkpGG-~lii~~~~ 237 (299)
..+++. ....+++++.++||||| .+++++..
T Consensus 249 ~p~~~~-~~~~~l~~~~~~LkpgG~~~~~~~~~ 280 (373)
T 2qm3_A 249 PPETLE-AIRAFVGRGIATLKGPRCAGYFGITR 280 (373)
T ss_dssp CCSSHH-HHHHHHHHHHHTBCSTTCEEEEEECT
T ss_pred CCCchH-HHHHHHHHHHHHcccCCeEEEEEEec
Confidence 655443 35889999999999999 55777665
No 229
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=98.88 E-value=1.1e-09 Score=95.98 Aligned_cols=120 Identities=8% Similarity=-0.084 Sum_probs=83.0
Q ss_pred hcCCceeeccCcCCccccC--CCCCCCeEEEEeCCHHHHHhcCCC---------CcEEEeccCCCCCCCCCCCCeeEEEe
Q 022305 136 KYYSEVFPPSNTPGVSHFP--PGYKQDRIVGMGMNEEELKRNPVL---------TEYVVQDLNLNPKLPFEDNSFDVITN 204 (299)
Q Consensus 136 ~~~~~vLDiGcG~G~~~~~--~~~~~~~v~gvD~S~~ml~~a~~~---------~~~~~~D~~~~~~lpf~~~~FD~Vis 204 (299)
+...+|+|+|||+|...+. ...+..+|+++|+++.+++.|+++ +++..+|. .....+++.||+|+.
T Consensus 20 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~---l~~~~~~~~~D~Ivi 96 (230)
T 3lec_A 20 PKGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANG---LSAFEEADNIDTITI 96 (230)
T ss_dssp CTTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSG---GGGCCGGGCCCEEEE
T ss_pred CCCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECch---hhccccccccCEEEE
Confidence 3446899999999973332 233456899999999999987652 78899998 444444457999886
Q ss_pred cccccccCCHHHHHHHHHhhccCCcEEEEEecCcchHHHHHHhhhhcCCCchhhhHHHHHHHhCCCCCCeeeecC
Q 022305 205 VVSVDYLTKPIEVFKEMCQVLKPGGLAIVSFSNRCFWTKAISIWTSTGDADHVMIVGAYFHYAGGYEPPQAVDIS 279 (299)
Q Consensus 205 ~~~l~~~~d~~~~l~ei~rvLkpGG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aGF~~v~~~~~~ 279 (299)
....- .-...++.+..+.|+++|.||++-.. +...+.+++ .+.||..++..-+.
T Consensus 97 aGmGg--~lI~~IL~~~~~~l~~~~~lIlqp~~------------------~~~~lr~~L-~~~Gf~i~~E~lv~ 150 (230)
T 3lec_A 97 CGMGG--RLIADILNNDIDKLQHVKTLVLQPNN------------------REDDLRKWL-AANDFEIVAEDILT 150 (230)
T ss_dssp EEECH--HHHHHHHHHTGGGGTTCCEEEEEESS------------------CHHHHHHHH-HHTTEEEEEEEEEE
T ss_pred eCCch--HHHHHHHHHHHHHhCcCCEEEEECCC------------------ChHHHHHHH-HHCCCEEEEEEEEE
Confidence 54332 23567888999999999999997321 122344445 34789877765544
No 230
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.84 E-value=2.1e-11 Score=107.58 Aligned_cols=101 Identities=11% Similarity=0.053 Sum_probs=70.7
Q ss_pred HHHHhh-hcCCceeeccCcCCccccCCCCCCCeEEEEeCCHHHHHhcCCC------CcEEEeccCCCCCCCCCC-CCeeE
Q 022305 130 AIAALT-KYYSEVFPPSNTPGVSHFPPGYKQDRIVGMGMNEEELKRNPVL------TEYVVQDLNLNPKLPFED-NSFDV 201 (299)
Q Consensus 130 ~~~~l~-~~~~~vLDiGcG~G~~~~~~~~~~~~v~gvD~S~~ml~~a~~~------~~~~~~D~~~~~~lpf~~-~~FD~ 201 (299)
+++.+. ....+|||+|||+|.........+.+|+|+|+|+.|++.++++ ++++++|+ .++++++ ++| .
T Consensus 21 i~~~~~~~~~~~VLDiG~G~G~~~~~l~~~~~~v~~id~~~~~~~~a~~~~~~~~~v~~~~~D~---~~~~~~~~~~f-~ 96 (245)
T 1yub_A 21 IIKQLNLKETDTVYEIGTGKGHLTTKLAKISKQVTSIELDSHLFNLSSEKLKLNTRVTLIHQDI---LQFQFPNKQRY-K 96 (245)
T ss_dssp HHHHCCCCSSEEEEECSCCCSSCSHHHHHHSSEEEESSSSCSSSSSSSCTTTTCSEEEECCSCC---TTTTCCCSSEE-E
T ss_pred HHHhcCCCCCCEEEEEeCCCCHHHHHHHHhCCeEEEEECCHHHHHHHHHHhccCCceEEEECCh---hhcCcccCCCc-E
Confidence 344442 2346899999999974443333358999999999999988764 57788898 7788764 688 6
Q ss_pred EEecc-----------cccccCCHHHHH----HHHHhhccCCcEEEEE
Q 022305 202 ITNVV-----------SVDYLTKPIEVF----KEMCQVLKPGGLAIVS 234 (299)
Q Consensus 202 Vis~~-----------~l~~~~d~~~~l----~ei~rvLkpGG~lii~ 234 (299)
|+++. .+.|..+...++ +.+.|+|||||.+.+.
T Consensus 97 vv~n~Py~~~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v~ 144 (245)
T 1yub_A 97 IVGNIPYHLSTQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGLL 144 (245)
T ss_dssp EEEECCSSSCHHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHHH
T ss_pred EEEeCCccccHHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhhh
Confidence 66652 122333444555 7799999999977654
No 231
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=98.84 E-value=3.2e-10 Score=102.46 Aligned_cols=90 Identities=16% Similarity=0.074 Sum_probs=62.9
Q ss_pred cCCceeeccCcCCccccCCCCCCCeEEEEeCCHHHHHhcCC---------CCcEEEeccCCCCCCCCCCCCeeEEEeccc
Q 022305 137 YYSEVFPPSNTPGVSHFPPGYKQDRIVGMGMNEEELKRNPV---------LTEYVVQDLNLNPKLPFEDNSFDVITNVVS 207 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~~~~~~~~~~~v~gvD~S~~ml~~a~~---------~~~~~~~D~~~~~~lpf~~~~FD~Vis~~~ 207 (299)
...+|||+|||+|.........+.+|+|+|+|+.|++.+++ +++++.+|+ .+++++ +||+|+++..
T Consensus 28 ~~~~VLDiG~G~G~lt~~L~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~---~~~~~~--~fD~vv~nlp 102 (285)
T 1zq9_A 28 PTDVVLEVGPGTGNMTVKLLEKAKKVVACELDPRLVAELHKRVQGTPVASKLQVLVGDV---LKTDLP--FFDTCVANLP 102 (285)
T ss_dssp TTCEEEEECCTTSTTHHHHHHHSSEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCT---TTSCCC--CCSEEEEECC
T ss_pred CCCEEEEEcCcccHHHHHHHhhCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcce---ecccch--hhcEEEEecC
Confidence 34689999999997444433335799999999999986543 367899999 666664 7999999754
Q ss_pred ccc-----------cCCHHHHH----HHH--HhhccCCcEE
Q 022305 208 VDY-----------LTKPIEVF----KEM--CQVLKPGGLA 231 (299)
Q Consensus 208 l~~-----------~~d~~~~l----~ei--~rvLkpGG~l 231 (299)
.++ .+++..++ +|+ .++|||||.+
T Consensus 103 y~~~~~~~~~~l~~~~~~~~~~~m~qkEva~r~vlkPGg~~ 143 (285)
T 1zq9_A 103 YQISSPFVFKLLLHRPFFRCAILMFQREFALRLVAKPGDKL 143 (285)
T ss_dssp GGGHHHHHHHHHHCSSCCSEEEEEEEHHHHHHHHCCTTCTT
T ss_pred cccchHHHHHHHhcCcchhhhhhhhhHHHHHHHhcCCCCcc
Confidence 433 33322111 344 4799999965
No 232
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=98.82 E-value=4.3e-09 Score=89.51 Aligned_cols=90 Identities=7% Similarity=0.045 Sum_probs=66.6
Q ss_pred CCceeeccCcCCccccCCCC-CCCeEEEEeCCHHHHHhcCC-------CCcEEEeccCCCCCCCCCCCCeeEEEeccccc
Q 022305 138 YSEVFPPSNTPGVSHFPPGY-KQDRIVGMGMNEEELKRNPV-------LTEYVVQDLNLNPKLPFEDNSFDVITNVVSVD 209 (299)
Q Consensus 138 ~~~vLDiGcG~G~~~~~~~~-~~~~v~gvD~S~~ml~~a~~-------~~~~~~~D~~~~~~lpf~~~~FD~Vis~~~l~ 209 (299)
..+|||+|||+|........ ...+++|+|+|+.|++.+++ +++++.+|+ ..++ ++||+|+++..++
T Consensus 50 ~~~vlD~g~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~---~~~~---~~~D~v~~~~p~~ 123 (207)
T 1wy7_A 50 GKVVADLGAGTGVLSYGALLLGAKEVICVEVDKEAVDVLIENLGEFKGKFKVFIGDV---SEFN---SRVDIVIMNPPFG 123 (207)
T ss_dssp TCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGGTTSEEEEESCG---GGCC---CCCSEEEECCCCS
T ss_pred cCEEEEeeCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCCCEEEEECch---HHcC---CCCCEEEEcCCCc
Confidence 46899999999973332222 23479999999999987665 367889998 5554 4899999998777
Q ss_pred ccC--CHHHHHHHHHhhccCCcEEEEEe
Q 022305 210 YLT--KPIEVFKEMCQVLKPGGLAIVSF 235 (299)
Q Consensus 210 ~~~--d~~~~l~ei~rvLkpGG~lii~~ 235 (299)
+.. ....+++++.++| ||.+++.+
T Consensus 124 ~~~~~~~~~~l~~~~~~l--~~~~~~~~ 149 (207)
T 1wy7_A 124 SQRKHADRPFLLKAFEIS--DVVYSIHL 149 (207)
T ss_dssp SSSTTTTHHHHHHHHHHC--SEEEEEEE
T ss_pred cccCCchHHHHHHHHHhc--CcEEEEEe
Confidence 664 3467899999998 66554443
No 233
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=98.82 E-value=2.8e-09 Score=94.72 Aligned_cols=94 Identities=12% Similarity=0.022 Sum_probs=71.7
Q ss_pred CCceeeccCcCCccccCC--CCCCCeEEEEeCCHHHHHhcCCC-------CcEEEeccCCCCCCCCCCCCeeEEEecccc
Q 022305 138 YSEVFPPSNTPGVSHFPP--GYKQDRIVGMGMNEEELKRNPVL-------TEYVVQDLNLNPKLPFEDNSFDVITNVVSV 208 (299)
Q Consensus 138 ~~~vLDiGcG~G~~~~~~--~~~~~~v~gvD~S~~ml~~a~~~-------~~~~~~D~~~~~~lpf~~~~FD~Vis~~~l 208 (299)
..+|||+|||.|...+.. ..+..+++++|+++.|++.++.+ .++.+.|. . ...+...||+|+++-++
T Consensus 133 p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g~~~~~~v~D~---~-~~~p~~~~DvaL~lkti 208 (281)
T 3lcv_B 133 PNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLNVPHRTNVADL---L-EDRLDEPADVTLLLKTL 208 (281)
T ss_dssp CSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTTCCEEEEECCT---T-TSCCCSCCSEEEETTCH
T ss_pred CceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEeee---c-ccCCCCCcchHHHHHHH
Confidence 569999999999744432 23678999999999999977653 56777886 3 33356789999999999
Q ss_pred cccCCHH--HHHHHHHhhccCCcEEEEEecC
Q 022305 209 DYLTKPI--EVFKEMCQVLKPGGLAIVSFSN 237 (299)
Q Consensus 209 ~~~~d~~--~~l~ei~rvLkpGG~lii~~~~ 237 (299)
+|+++-. ..+ ++...|+|+|.+ ++++.
T Consensus 209 ~~Le~q~kg~g~-~ll~aL~~~~vv-VSfp~ 237 (281)
T 3lcv_B 209 PCLETQQRGSGW-EVIDIVNSPNIV-VTFPT 237 (281)
T ss_dssp HHHHHHSTTHHH-HHHHHSSCSEEE-EEEEC
T ss_pred HHhhhhhhHHHH-HHHHHhCCCCEE-Eeccc
Confidence 9997542 344 899999999955 45554
No 234
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=98.81 E-value=8e-10 Score=104.40 Aligned_cols=99 Identities=10% Similarity=0.013 Sum_probs=70.0
Q ss_pred hcCCceeeccCcCCccccCCCCCCCeEEEEeCCHHHHHhcCCC-------CcEEEeccCCCCCC-CCCCCCeeEEEeccc
Q 022305 136 KYYSEVFPPSNTPGVSHFPPGYKQDRIVGMGMNEEELKRNPVL-------TEYVVQDLNLNPKL-PFEDNSFDVITNVVS 207 (299)
Q Consensus 136 ~~~~~vLDiGcG~G~~~~~~~~~~~~v~gvD~S~~ml~~a~~~-------~~~~~~D~~~~~~l-pf~~~~FD~Vis~~~ 207 (299)
+...+|||+|||+|...+.....++.|+|+|+|+.|++.++++ .++.++|+ .++ +...+.||+|++.--
T Consensus 213 ~~g~~VLDlg~GtG~~sl~~a~~ga~V~avDis~~al~~a~~n~~~ng~~~~~~~~D~---~~~l~~~~~~fD~Ii~dpP 289 (393)
T 4dmg_A 213 RPGERVLDVYSYVGGFALRAARKGAYALAVDKDLEALGVLDQAALRLGLRVDIRHGEA---LPTLRGLEGPFHHVLLDPP 289 (393)
T ss_dssp CTTCEEEEESCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCCCEEEESCH---HHHHHTCCCCEEEEEECCC
T ss_pred cCCCeEEEcccchhHHHHHHHHcCCeEEEEECCHHHHHHHHHHHHHhCCCCcEEEccH---HHHHHHhcCCCCEEEECCC
Confidence 3356899999999975554444467799999999999987764 35777887 332 222344999998632
Q ss_pred c---------cccCCHHHHHHHHHhhccCCcEEEEEecC
Q 022305 208 V---------DYLTKPIEVFKEMCQVLKPGGLAIVSFSN 237 (299)
Q Consensus 208 l---------~~~~d~~~~l~ei~rvLkpGG~lii~~~~ 237 (299)
. ....+..++++++.++|||||.+++...+
T Consensus 290 ~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s 328 (393)
T 4dmg_A 290 TLVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCS 328 (393)
T ss_dssp CCCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 1 11234568899999999999988865443
No 235
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=98.81 E-value=1.5e-09 Score=95.45 Aligned_cols=95 Identities=13% Similarity=0.026 Sum_probs=73.1
Q ss_pred cCCceeeccCcCCccccCCCCCCCeEEEEeCCHHHHHhcCCC-------CcEEEeccCCCCCCCCCCCCeeEEEeccccc
Q 022305 137 YYSEVFPPSNTPGVSHFPPGYKQDRIVGMGMNEEELKRNPVL-------TEYVVQDLNLNPKLPFEDNSFDVITNVVSVD 209 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~~~~~~~~~~~v~gvD~S~~ml~~a~~~-------~~~~~~D~~~~~~lpf~~~~FD~Vis~~~l~ 209 (299)
...+|||+|||.|...++.. +..+++|+||++.|++.+++. ..+.++|. ...+.+ ++||+|++.-++|
T Consensus 105 ~p~~VLDlGCG~gpLal~~~-~~~~y~a~DId~~~i~~ar~~~~~~g~~~~~~v~D~---~~~~~~-~~~DvvLllk~lh 179 (253)
T 3frh_A 105 TPRRVLDIACGLNPLALYER-GIASVWGCDIHQGLGDVITPFAREKDWDFTFALQDV---LCAPPA-EAGDLALIFKLLP 179 (253)
T ss_dssp CCSEEEEETCTTTHHHHHHT-TCSEEEEEESBHHHHHHHHHHHHHTTCEEEEEECCT---TTSCCC-CBCSEEEEESCHH
T ss_pred CCCeEEEecCCccHHHHHhc-cCCeEEEEeCCHHHHHHHHHHHHhcCCCceEEEeec---ccCCCC-CCcchHHHHHHHH
Confidence 35699999999997555433 788999999999999987653 56788898 555654 4899999999999
Q ss_pred ccCCH-HHHHHHHHhhccCCcEEEEEecC
Q 022305 210 YLTKP-IEVFKEMCQVLKPGGLAIVSFSN 237 (299)
Q Consensus 210 ~~~d~-~~~l~ei~rvLkpGG~lii~~~~ 237 (299)
|+++. ....-++...|+++| +++++|.
T Consensus 180 ~LE~q~~~~~~~ll~aL~~~~-vvVsfPt 207 (253)
T 3frh_A 180 LLEREQAGSAMALLQSLNTPR-MAVSFPT 207 (253)
T ss_dssp HHHHHSTTHHHHHHHHCBCSE-EEEEEEC
T ss_pred HhhhhchhhHHHHHHHhcCCC-EEEEcCh
Confidence 99643 233448888999997 5566664
No 236
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=98.81 E-value=1.3e-09 Score=100.88 Aligned_cols=97 Identities=13% Similarity=0.134 Sum_probs=72.1
Q ss_pred CCceeeccCcCCccccCC--CCC-----CCeEEEEeCCHHHHHhcCCC-------CcEEEeccCCCCCCCCCCCCeeEEE
Q 022305 138 YSEVFPPSNTPGVSHFPP--GYK-----QDRIVGMGMNEEELKRNPVL-------TEYVVQDLNLNPKLPFEDNSFDVIT 203 (299)
Q Consensus 138 ~~~vLDiGcG~G~~~~~~--~~~-----~~~v~gvD~S~~ml~~a~~~-------~~~~~~D~~~~~~lpf~~~~FD~Vi 203 (299)
..+|||+|||+|...... ..+ ..+++|+|+++.+++.|+.+ ++++.+|. .. +..+++||+|+
T Consensus 131 ~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~~~~i~~~D~---l~-~~~~~~fD~Ii 206 (344)
T 2f8l_A 131 NVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQKMTLLHQDG---LA-NLLVDPVDVVI 206 (344)
T ss_dssp EEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTCCCEEEESCT---TS-CCCCCCEEEEE
T ss_pred CCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCCCceEEECCC---CC-ccccCCccEEE
Confidence 468999999999732211 111 26899999999999887652 67888887 33 33467899999
Q ss_pred ecccccccCCHH------------------HHHHHHHhhccCCcEEEEEecCc
Q 022305 204 NVVSVDYLTKPI------------------EVFKEMCQVLKPGGLAIVSFSNR 238 (299)
Q Consensus 204 s~~~l~~~~d~~------------------~~l~ei~rvLkpGG~lii~~~~~ 238 (299)
++--+.++++.. .+++++.+.|||||.+++.+++.
T Consensus 207 ~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p~~ 259 (344)
T 2f8l_A 207 SDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVPDA 259 (344)
T ss_dssp EECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEEGG
T ss_pred ECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEECch
Confidence 997766654322 57999999999999999888753
No 237
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=98.79 E-value=8.7e-10 Score=103.81 Aligned_cols=99 Identities=11% Similarity=0.094 Sum_probs=70.4
Q ss_pred cCCceeeccCcCCccccCCCCCC-CeEEEEeCCHHHHHhcCC----------CCcEEEeccCCCCC-CCC---CCCCeeE
Q 022305 137 YYSEVFPPSNTPGVSHFPPGYKQ-DRIVGMGMNEEELKRNPV----------LTEYVVQDLNLNPK-LPF---EDNSFDV 201 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~~~~~~~~~-~~v~gvD~S~~ml~~a~~----------~~~~~~~D~~~~~~-lpf---~~~~FD~ 201 (299)
...+|||+|||+|...+.....+ .+|+|+|+|+.|++.|++ +++++++|+ .+ ++. ..++||+
T Consensus 212 ~~~~VLDl~cGtG~~sl~la~~ga~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~---~~~l~~~~~~~~~fD~ 288 (385)
T 2b78_A 212 AGKTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDV---FDYFKYARRHHLTYDI 288 (385)
T ss_dssp BTCEEEEETCTTTHHHHHHHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCH---HHHHHHHHHTTCCEEE
T ss_pred CCCeEEEEeeccCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCH---HHHHHHHHHhCCCccE
Confidence 34689999999998544433333 489999999999987654 357888887 33 221 2468999
Q ss_pred EEecccc-----ccc----CCHHHHHHHHHhhccCCcEEEEEecCc
Q 022305 202 ITNVVSV-----DYL----TKPIEVFKEMCQVLKPGGLAIVSFSNR 238 (299)
Q Consensus 202 Vis~~~l-----~~~----~d~~~~l~ei~rvLkpGG~lii~~~~~ 238 (299)
|++.--. .+. .+..++++++.++|||||.++++....
T Consensus 289 Ii~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~ 334 (385)
T 2b78_A 289 IIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNAA 334 (385)
T ss_dssp EEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred EEECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCC
Confidence 9984211 223 345567888899999999999986554
No 238
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=98.79 E-value=5.9e-10 Score=105.14 Aligned_cols=99 Identities=12% Similarity=0.111 Sum_probs=72.4
Q ss_pred cCCceeeccCcCCccccCCCCC-CCeEEEEeCCHHHHHhcCC---------CCcEEEeccCCCCCCCC----CCCCeeEE
Q 022305 137 YYSEVFPPSNTPGVSHFPPGYK-QDRIVGMGMNEEELKRNPV---------LTEYVVQDLNLNPKLPF----EDNSFDVI 202 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~~~~~~~~-~~~v~gvD~S~~ml~~a~~---------~~~~~~~D~~~~~~lpf----~~~~FD~V 202 (299)
...+|||+|||+|...+..... ..+|+|+|+|+.+++.+++ +++++.+|+ ..+.. ++++||+|
T Consensus 217 ~~~~VLDl~~G~G~~~~~la~~g~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~---~~~~~~~~~~~~~fD~V 293 (396)
T 2as0_A 217 PGDRVLDVFTYTGGFAIHAAIAGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSA---FEEMEKLQKKGEKFDIV 293 (396)
T ss_dssp TTCEEEETTCTTTHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCH---HHHHHHHHHTTCCEEEE
T ss_pred CCCeEEEecCCCCHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCH---HHHHHHHHhhCCCCCEE
Confidence 4468999999999744433323 3589999999999987654 367888887 44321 35789999
Q ss_pred Eecc---------cccccCCHHHHHHHHHhhccCCcEEEEEecCc
Q 022305 203 TNVV---------SVDYLTKPIEVFKEMCQVLKPGGLAIVSFSNR 238 (299)
Q Consensus 203 is~~---------~l~~~~d~~~~l~ei~rvLkpGG~lii~~~~~ 238 (299)
++.- +.++..+...++.++.++|||||.+++...+.
T Consensus 294 i~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 338 (396)
T 2as0_A 294 VLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCSQ 338 (396)
T ss_dssp EECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECCT
T ss_pred EECCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCC
Confidence 9852 22233566789999999999999888876553
No 239
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.78 E-value=6.7e-10 Score=112.25 Aligned_cols=97 Identities=15% Similarity=0.200 Sum_probs=74.2
Q ss_pred CCceeeccCcCCccccCCCCCC-CeEEEEeCCHHHHHhcCC----------CCcEEEeccCCCCC-CCCCCCCeeEEEec
Q 022305 138 YSEVFPPSNTPGVSHFPPGYKQ-DRIVGMGMNEEELKRNPV----------LTEYVVQDLNLNPK-LPFEDNSFDVITNV 205 (299)
Q Consensus 138 ~~~vLDiGcG~G~~~~~~~~~~-~~v~gvD~S~~ml~~a~~----------~~~~~~~D~~~~~~-lpf~~~~FD~Vis~ 205 (299)
..+|||+|||+|...+.....+ .+|+++|+|+.|++.+++ +++++++|+ .+ ++..+++||+|++.
T Consensus 540 g~~VLDlg~GtG~~sl~aa~~ga~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~---~~~l~~~~~~fD~Ii~D 616 (703)
T 3v97_A 540 GKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADC---LAWLREANEQFDLIFID 616 (703)
T ss_dssp TCEEEEESCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCH---HHHHHHCCCCEEEEEEC
T ss_pred CCcEEEeeechhHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCH---HHHHHhcCCCccEEEEC
Confidence 4689999999997444333234 469999999999987654 367888998 43 44556889999985
Q ss_pred c-----------cccccCCHHHHHHHHHhhccCCcEEEEEecC
Q 022305 206 V-----------SVDYLTKPIEVFKEMCQVLKPGGLAIVSFSN 237 (299)
Q Consensus 206 ~-----------~l~~~~d~~~~l~ei~rvLkpGG~lii~~~~ 237 (299)
- ++++..+..++++++.++|||||.++++...
T Consensus 617 PP~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~ 659 (703)
T 3v97_A 617 PPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNK 659 (703)
T ss_dssp CCSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred CccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 3 3444567788999999999999999988764
No 240
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=98.75 E-value=2.4e-09 Score=102.90 Aligned_cols=98 Identities=16% Similarity=0.080 Sum_probs=68.6
Q ss_pred cCCceeeccCcCCc--cccCCCCC-CCeEEEEeCCHHHHHhcCCC--------CcEEEeccCCCCCCC-CCCCCeeEEEe
Q 022305 137 YYSEVFPPSNTPGV--SHFPPGYK-QDRIVGMGMNEEELKRNPVL--------TEYVVQDLNLNPKLP-FEDNSFDVITN 204 (299)
Q Consensus 137 ~~~~vLDiGcG~G~--~~~~~~~~-~~~v~gvD~S~~ml~~a~~~--------~~~~~~D~~~~~~lp-f~~~~FD~Vis 204 (299)
...+|||+|||+|. .+++.... ...|+++|+|+.+++.++++ +.++.+|. ..++ ..+++||+|++
T Consensus 105 ~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~~Da---~~l~~~~~~~FD~Il~ 181 (456)
T 3m4x_A 105 PGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVSNAIVTNHAP---AELVPHFSGFFDRIVV 181 (456)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCSSEEEECCCH---HHHHHHHTTCEEEEEE
T ss_pred CCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeCCH---HHhhhhccccCCEEEE
Confidence 45689999999996 33333223 47999999999999876542 56677787 5554 34678999996
Q ss_pred cc------cccccCC----------------HHHHHHHHHhhccCCcEEEEEecC
Q 022305 205 VV------SVDYLTK----------------PIEVFKEMCQVLKPGGLAIVSFSN 237 (299)
Q Consensus 205 ~~------~l~~~~d----------------~~~~l~ei~rvLkpGG~lii~~~~ 237 (299)
.- ++.+-++ ..++|+++.++|||||.++.++..
T Consensus 182 DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs 236 (456)
T 3m4x_A 182 DAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCT 236 (456)
T ss_dssp ECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESC
T ss_pred CCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEee
Confidence 31 1211111 127899999999999999987653
No 241
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=98.74 E-value=4.9e-10 Score=105.30 Aligned_cols=97 Identities=15% Similarity=0.093 Sum_probs=71.4
Q ss_pred CCceeeccCcCCccccCCCCCCCeEEEEeCCHHHHHhcCCC--------CcEEEeccCCCCCCCC----CCCCeeEEEec
Q 022305 138 YSEVFPPSNTPGVSHFPPGYKQDRIVGMGMNEEELKRNPVL--------TEYVVQDLNLNPKLPF----EDNSFDVITNV 205 (299)
Q Consensus 138 ~~~vLDiGcG~G~~~~~~~~~~~~v~gvD~S~~ml~~a~~~--------~~~~~~D~~~~~~lpf----~~~~FD~Vis~ 205 (299)
..+|||+|||+|...+.......+|+|+|+|+.+++.++++ ++++.+|+ ..+.. ++++||+|++.
T Consensus 210 ~~~VLDlg~G~G~~~~~la~~~~~v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~d~---~~~~~~~~~~~~~fD~Ii~d 286 (382)
T 1wxx_A 210 GERALDVFSYAGGFALHLALGFREVVAVDSSAEALRRAEENARLNGLGNVRVLEANA---FDLLRRLEKEGERFDLVVLD 286 (382)
T ss_dssp EEEEEEETCTTTHHHHHHHHHEEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCH---HHHHHHHHHTTCCEEEEEEC
T ss_pred CCeEEEeeeccCHHHHHHHHhCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEECCH---HHHHHHHHhcCCCeeEEEEC
Confidence 35799999999974433322257899999999999877653 67888888 44321 25789999984
Q ss_pred c---------cccccCCHHHHHHHHHhhccCCcEEEEEecC
Q 022305 206 V---------SVDYLTKPIEVFKEMCQVLKPGGLAIVSFSN 237 (299)
Q Consensus 206 ~---------~l~~~~d~~~~l~ei~rvLkpGG~lii~~~~ 237 (299)
- ......+...++.++.++|||||.++++...
T Consensus 287 pP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 327 (382)
T 1wxx_A 287 PPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCS 327 (382)
T ss_dssp CCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 2 1222245678999999999999999987654
No 242
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=98.74 E-value=2.1e-09 Score=94.93 Aligned_cols=95 Identities=6% Similarity=-0.097 Sum_probs=69.3
Q ss_pred hhcCCceeeccCcCCccccC--CCCCCCeEEEEeCCHHHHHhcCCC---------CcEEEeccCCCCCCCCCCCCeeEEE
Q 022305 135 TKYYSEVFPPSNTPGVSHFP--PGYKQDRIVGMGMNEEELKRNPVL---------TEYVVQDLNLNPKLPFEDNSFDVIT 203 (299)
Q Consensus 135 ~~~~~~vLDiGcG~G~~~~~--~~~~~~~v~gvD~S~~ml~~a~~~---------~~~~~~D~~~~~~lpf~~~~FD~Vi 203 (299)
.+...+|||+|||+|...+. ...+..+|+|+|+++.+++.|+++ +++..+|. .....++++||+|+
T Consensus 19 v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~---l~~~~~~~~~D~Iv 95 (244)
T 3gnl_A 19 ITKNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNG---LAVIEKKDAIDTIV 95 (244)
T ss_dssp CCSSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSG---GGGCCGGGCCCEEE
T ss_pred CCCCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecch---hhccCccccccEEE
Confidence 33446899999999973332 233456899999999999987653 67888998 44444444699988
Q ss_pred ecccccccCCHHHHHHHHHhhccCCcEEEEE
Q 022305 204 NVVSVDYLTKPIEVFKEMCQVLKPGGLAIVS 234 (299)
Q Consensus 204 s~~~l~~~~d~~~~l~ei~rvLkpGG~lii~ 234 (299)
+....- .-...++.+..+.|+++|.||++
T Consensus 96 iagmGg--~lI~~IL~~~~~~L~~~~~lIlq 124 (244)
T 3gnl_A 96 IAGMGG--TLIRTILEEGAAKLAGVTKLILQ 124 (244)
T ss_dssp EEEECH--HHHHHHHHHTGGGGTTCCEEEEE
T ss_pred EeCCch--HHHHHHHHHHHHHhCCCCEEEEE
Confidence 654322 22567889999999999999997
No 243
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=98.71 E-value=6.8e-09 Score=95.88 Aligned_cols=88 Identities=8% Similarity=0.045 Sum_probs=68.4
Q ss_pred cCCceeeccCcCCccccCCCCCCCeEEEEeCCHHHHHhcCC---------CCcEEEeccCCCCCCCCCCCCeeEEEeccc
Q 022305 137 YYSEVFPPSNTPGVSHFPPGYKQDRIVGMGMNEEELKRNPV---------LTEYVVQDLNLNPKLPFEDNSFDVITNVVS 207 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~~~~~~~~~~~v~gvD~S~~ml~~a~~---------~~~~~~~D~~~~~~lpf~~~~FD~Vis~~~ 207 (299)
...+|||+|||+|...+. .....+|+|+|+|+.+++.+++ +++++.+|+ ..+. ++||+|++.--
T Consensus 195 ~~~~VLDlg~G~G~~~l~-a~~~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~---~~~~---~~fD~Vi~dpP 267 (336)
T 2yx1_A 195 LNDVVVDMFAGVGPFSIA-CKNAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDV---REVD---VKGNRVIMNLP 267 (336)
T ss_dssp TTCEEEETTCTTSHHHHH-TTTSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCG---GGCC---CCEEEEEECCT
T ss_pred CCCEEEEccCccCHHHHh-ccCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCh---HHhc---CCCcEEEECCc
Confidence 346899999999985555 4467899999999999987654 367889998 5544 78999998631
Q ss_pred ccccCCHHHHHHHHHhhccCCcEEEEEe
Q 022305 208 VDYLTKPIEVFKEMCQVLKPGGLAIVSF 235 (299)
Q Consensus 208 l~~~~d~~~~l~ei~rvLkpGG~lii~~ 235 (299)
. ....+++++.++|+|||.+++..
T Consensus 268 -~---~~~~~l~~~~~~L~~gG~l~~~~ 291 (336)
T 2yx1_A 268 -K---FAHKFIDKALDIVEEGGVIHYYT 291 (336)
T ss_dssp -T---TGGGGHHHHHHHEEEEEEEEEEE
T ss_pred -H---hHHHHHHHHHHHcCCCCEEEEEE
Confidence 1 22378999999999999887753
No 244
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=98.71 E-value=3.7e-09 Score=92.35 Aligned_cols=120 Identities=8% Similarity=-0.067 Sum_probs=80.5
Q ss_pred hcCCceeeccCcCCccccC--CCCCCCeEEEEeCCHHHHHhcCCC---------CcEEEeccCCCCCCCCCCCCeeEEEe
Q 022305 136 KYYSEVFPPSNTPGVSHFP--PGYKQDRIVGMGMNEEELKRNPVL---------TEYVVQDLNLNPKLPFEDNSFDVITN 204 (299)
Q Consensus 136 ~~~~~vLDiGcG~G~~~~~--~~~~~~~v~gvD~S~~ml~~a~~~---------~~~~~~D~~~~~~lpf~~~~FD~Vis 204 (299)
+...+|||+|||+|...+. ...+..+|+++|+++.+++.|+++ +++..+|.. +.++. ...||+|+.
T Consensus 14 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l--~~l~~-~~~~D~Ivi 90 (225)
T 3kr9_A 14 SQGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGL--AAFEE-TDQVSVITI 90 (225)
T ss_dssp CTTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGG--GGCCG-GGCCCEEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchh--hhccc-CcCCCEEEE
Confidence 3446899999999973332 333456899999999999987653 678888872 22332 126999886
Q ss_pred cccccccCCHHHHHHHHHhhccCCcEEEEEecCcchHHHHHHhhhhcCCCchhhhHHHHHHHhCCCCCCeeeecC
Q 022305 205 VVSVDYLTKPIEVFKEMCQVLKPGGLAIVSFSNRCFWTKAISIWTSTGDADHVMIVGAYFHYAGGYEPPQAVDIS 279 (299)
Q Consensus 205 ~~~l~~~~d~~~~l~ei~rvLkpGG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aGF~~v~~~~~~ 279 (299)
...-- .-...++.+..+.|+|+|++|++-.. +...+.+++ ...||..++..-+.
T Consensus 91 aG~Gg--~~i~~Il~~~~~~L~~~~~lVlq~~~------------------~~~~vr~~L-~~~Gf~i~~e~lv~ 144 (225)
T 3kr9_A 91 AGMGG--RLIARILEEGLGKLANVERLILQPNN------------------REDDLRIWL-QDHGFQIVAESILE 144 (225)
T ss_dssp EEECH--HHHHHHHHHTGGGCTTCCEEEEEESS------------------CHHHHHHHH-HHTTEEEEEEEEEE
T ss_pred cCCCh--HHHHHHHHHHHHHhCCCCEEEEECCC------------------CHHHHHHHH-HHCCCEEEEEEEEE
Confidence 54322 12578899999999999999996321 122334444 34788877654443
No 245
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=98.71 E-value=4.1e-09 Score=99.38 Aligned_cols=98 Identities=18% Similarity=0.130 Sum_probs=72.7
Q ss_pred cCCceeeccCcCCccccCCCCC-CCeEEEEeCCHHHHHhcCC----------CCcEEEeccCCCCCCCC----CCCCeeE
Q 022305 137 YYSEVFPPSNTPGVSHFPPGYK-QDRIVGMGMNEEELKRNPV----------LTEYVVQDLNLNPKLPF----EDNSFDV 201 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~~~~~~~~-~~~v~gvD~S~~ml~~a~~----------~~~~~~~D~~~~~~lpf----~~~~FD~ 201 (299)
...+|||+|||+|...+..... ..+|+|+|+|+.+++.+++ +++++.+|+ .++.. .+++||+
T Consensus 220 ~~~~VLDl~cG~G~~sl~la~~g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~---~~~~~~~~~~~~~fD~ 296 (396)
T 3c0k_A 220 ENKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDV---FKLLRTYRDRGEKFDV 296 (396)
T ss_dssp TTCEEEEESCTTCSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCH---HHHHHHHHHTTCCEEE
T ss_pred CCCeEEEeeccCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCH---HHHHHHHHhcCCCCCE
Confidence 3468999999999844433333 3589999999999986543 357888887 44321 2568999
Q ss_pred EEecc---------cccccCCHHHHHHHHHhhccCCcEEEEEecC
Q 022305 202 ITNVV---------SVDYLTKPIEVFKEMCQVLKPGGLAIVSFSN 237 (299)
Q Consensus 202 Vis~~---------~l~~~~d~~~~l~ei~rvLkpGG~lii~~~~ 237 (299)
|++.- ......+...++.++.++|||||.++++...
T Consensus 297 Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 341 (396)
T 3c0k_A 297 IVMDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCS 341 (396)
T ss_dssp EEECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred EEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 99862 2333456788999999999999999987654
No 246
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=98.67 E-value=8.3e-09 Score=97.40 Aligned_cols=95 Identities=20% Similarity=0.264 Sum_probs=69.7
Q ss_pred CCceeeccCcCCccccCCC--C-CCCeEEEEeCCHHHHHhcCCCCcEEEeccCCCCCCCCCCCCeeEEEeccc---cc--
Q 022305 138 YSEVFPPSNTPGVSHFPPG--Y-KQDRIVGMGMNEEELKRNPVLTEYVVQDLNLNPKLPFEDNSFDVITNVVS---VD-- 209 (299)
Q Consensus 138 ~~~vLDiGcG~G~~~~~~~--~-~~~~v~gvD~S~~ml~~a~~~~~~~~~D~~~~~~lpf~~~~FD~Vis~~~---l~-- 209 (299)
..+|||+|||+|....... . +..+++|+|+++.+++.| ..++++++|+ ...+ .+++||+|+++-- ..
T Consensus 40 ~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a-~~~~~~~~D~---~~~~-~~~~fD~Ii~NPPy~~~~~~ 114 (421)
T 2ih2_A 40 GGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP-PWAEGILADF---LLWE-PGEAFDLILGNPPYGIVGEA 114 (421)
T ss_dssp TCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC-TTEEEEESCG---GGCC-CSSCEEEEEECCCCCCBSCT
T ss_pred CCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC-CCCcEEeCCh---hhcC-ccCCCCEEEECcCccCcccc
Confidence 4589999999997333222 1 457999999999999988 5688999998 4443 3468999999611 11
Q ss_pred -----ccCCH-------------------HHHHHHHHhhccCCcEEEEEecC
Q 022305 210 -----YLTKP-------------------IEVFKEMCQVLKPGGLAIVSFSN 237 (299)
Q Consensus 210 -----~~~d~-------------------~~~l~ei~rvLkpGG~lii~~~~ 237 (299)
|+.+. ..+++.+.++|||||.+++.+++
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~ 166 (421)
T 2ih2_A 115 SKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPA 166 (421)
T ss_dssp TTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEEG
T ss_pred cccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEECh
Confidence 12111 25689999999999999888775
No 247
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=98.66 E-value=1e-08 Score=93.17 Aligned_cols=88 Identities=14% Similarity=0.071 Sum_probs=59.7
Q ss_pred cCCceeeccCcCCccccCCCCCCCeEEEEeCCHHHHHhcCC--------CCcEEEeccCCCCCCCCCCCCeeEEEecccc
Q 022305 137 YYSEVFPPSNTPGVSHFPPGYKQDRIVGMGMNEEELKRNPV--------LTEYVVQDLNLNPKLPFEDNSFDVITNVVSV 208 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~~~~~~~~~~~v~gvD~S~~ml~~a~~--------~~~~~~~D~~~~~~lpf~~~~FD~Vis~~~l 208 (299)
...+|||+|||+|.........+.+|+|+|+|+.|++.+++ +++++.+|+ ..+++ .+||+|+++...
T Consensus 42 ~~~~VLDiG~G~G~lt~~La~~~~~v~~vDi~~~~~~~a~~~~~~~~~~~v~~~~~D~---~~~~~--~~~D~Vv~n~py 116 (299)
T 2h1r_A 42 SSDIVLEIGCGTGNLTVKLLPLAKKVITIDIDSRMISEVKKRCLYEGYNNLEVYEGDA---IKTVF--PKFDVCTANIPY 116 (299)
T ss_dssp TTCEEEEECCTTSTTHHHHTTTSSEEEEECSCHHHHHHHHHHHHHTTCCCEEC----C---CSSCC--CCCSEEEEECCG
T ss_pred CcCEEEEEcCcCcHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECch---hhCCc--ccCCEEEEcCCc
Confidence 44689999999998555444446899999999999986653 367888998 66665 479999997654
Q ss_pred cccCCH-HHHH---------------HHHHhhccCCc
Q 022305 209 DYLTKP-IEVF---------------KEMCQVLKPGG 229 (299)
Q Consensus 209 ~~~~d~-~~~l---------------~ei~rvLkpGG 229 (299)
+..... ...+ +.+.|+++|+|
T Consensus 117 ~~~~~~~~~ll~~~~~~~~~~l~~Q~e~a~rlla~~G 153 (299)
T 2h1r_A 117 KISSPLIFKLISHRPLFKCAVLMFQKEFAERMLANVG 153 (299)
T ss_dssp GGHHHHHHHHHHCSSCCSEEEEEEEHHHHHHHTCCTT
T ss_pred ccccHHHHHHHhcCCccceeeehHHHHHHHHHhcCCC
Confidence 433211 2333 44678888877
No 248
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=98.63 E-value=2e-08 Score=95.69 Aligned_cols=93 Identities=15% Similarity=0.097 Sum_probs=66.9
Q ss_pred hcCCceeeccCcCCccccCCCCCCCeEEEEeCCHHHHHhcCCC-------CcEEEeccCCCCCCCCCCCCeeEEEecccc
Q 022305 136 KYYSEVFPPSNTPGVSHFPPGYKQDRIVGMGMNEEELKRNPVL-------TEYVVQDLNLNPKLPFEDNSFDVITNVVSV 208 (299)
Q Consensus 136 ~~~~~vLDiGcG~G~~~~~~~~~~~~v~gvD~S~~ml~~a~~~-------~~~~~~D~~~~~~lpf~~~~FD~Vis~~~l 208 (299)
....+|||+|||+|...+.......+|+|+|+|+.|++.|+++ ++++.+|+ .++.. .+||+|++.---
T Consensus 289 ~~~~~VLDlgcG~G~~sl~la~~~~~V~gvD~s~~ai~~A~~n~~~ngl~v~~~~~d~---~~~~~--~~fD~Vv~dPPr 363 (425)
T 2jjq_A 289 VEGEKILDMYSGVGTFGIYLAKRGFNVKGFDSNEFAIEMARRNVEINNVDAEFEVASD---REVSV--KGFDTVIVDPPR 363 (425)
T ss_dssp CCSSEEEEETCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCCEEEEECCT---TTCCC--TTCSEEEECCCT
T ss_pred CCCCEEEEeeccchHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEECCh---HHcCc--cCCCEEEEcCCc
Confidence 3446899999999985544443467999999999999987653 67899998 55542 289999985331
Q ss_pred cccCCHHHHHHHHHhhccCCcEEEEEec
Q 022305 209 DYLTKPIEVFKEMCQVLKPGGLAIVSFS 236 (299)
Q Consensus 209 ~~~~d~~~~l~ei~rvLkpGG~lii~~~ 236 (299)
. .-...+++.+. .|+|||.++++..
T Consensus 364 ~--g~~~~~~~~l~-~l~p~givyvsc~ 388 (425)
T 2jjq_A 364 A--GLHPRLVKRLN-REKPGVIVYVSCN 388 (425)
T ss_dssp T--CSCHHHHHHHH-HHCCSEEEEEESC
T ss_pred c--chHHHHHHHHH-hcCCCcEEEEECC
Confidence 1 11234666654 5999999999853
No 249
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=98.59 E-value=4.3e-08 Score=93.60 Aligned_cols=104 Identities=17% Similarity=0.177 Sum_probs=70.6
Q ss_pred HHHHHHhh-hcCCceeeccCcCCccccCCCCCCCeEEEEeCCHHHHHhcCC--------CCcEEEeccCC-CCCCCCCCC
Q 022305 128 DPAIAALT-KYYSEVFPPSNTPGVSHFPPGYKQDRIVGMGMNEEELKRNPV--------LTEYVVQDLNL-NPKLPFEDN 197 (299)
Q Consensus 128 ~~~~~~l~-~~~~~vLDiGcG~G~~~~~~~~~~~~v~gvD~S~~ml~~a~~--------~~~~~~~D~~~-~~~lpf~~~ 197 (299)
+.+++.+. ....+|||+|||+|...+.......+|+|+|+|+.|++.|++ +++|+.+|+.. ...+++.++
T Consensus 276 ~~~~~~l~~~~~~~VLDlgcG~G~~~~~la~~~~~V~gvD~s~~al~~A~~n~~~~~~~~v~f~~~d~~~~l~~~~~~~~ 355 (433)
T 1uwv_A 276 ARALEWLDVQPEDRVLDLFCGMGNFTLPLATQAASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKN 355 (433)
T ss_dssp HHHHHHHTCCTTCEEEEESCTTTTTHHHHHTTSSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTTSCCSSSGGGTT
T ss_pred HHHHHhhcCCCCCEEEECCCCCCHHHHHHHhhCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEECCHHHHhhhhhhhcC
Confidence 33444442 234689999999998555544447899999999999987764 37899999831 011456778
Q ss_pred CeeEEEecccccccCCHHHHHHHHHhhccCCcEEEEEe
Q 022305 198 SFDVITNVVSVDYLTKPIEVFKEMCQVLKPGGLAIVSF 235 (299)
Q Consensus 198 ~FD~Vis~~~l~~~~d~~~~l~ei~rvLkpGG~lii~~ 235 (299)
+||+|++.--- .. ...+++.+. .++|++.++++.
T Consensus 356 ~fD~Vv~dPPr--~g-~~~~~~~l~-~~~p~~ivyvsc 389 (433)
T 1uwv_A 356 GFDKVLLDPAR--AG-AAGVMQQII-KLEPIRIVYVSC 389 (433)
T ss_dssp CCSEEEECCCT--TC-CHHHHHHHH-HHCCSEEEEEES
T ss_pred CCCEEEECCCC--cc-HHHHHHHHH-hcCCCeEEEEEC
Confidence 99999985321 11 124555554 378999888874
No 250
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=98.58 E-value=2.2e-08 Score=90.23 Aligned_cols=93 Identities=14% Similarity=0.060 Sum_probs=69.1
Q ss_pred hhhcCCceeeccCcCCccccCCCC-CCCeEEEEeCCHHHHHhcCCC---------CcEEEeccCCCCCCCCCCCCeeEEE
Q 022305 134 LTKYYSEVFPPSNTPGVSHFPPGY-KQDRIVGMGMNEEELKRNPVL---------TEYVVQDLNLNPKLPFEDNSFDVIT 203 (299)
Q Consensus 134 l~~~~~~vLDiGcG~G~~~~~~~~-~~~~v~gvD~S~~ml~~a~~~---------~~~~~~D~~~~~~lpf~~~~FD~Vi 203 (299)
+.+....|||+|||+|...+.... ..++|+++|+|+.+++.++++ ++++.+|. ..++. .+.||.|+
T Consensus 122 ~~~~g~~VlD~~aG~G~~~i~~a~~g~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~---~~~~~-~~~~D~Vi 197 (278)
T 3k6r_A 122 VAKPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDN---RDFPG-ENIADRIL 197 (278)
T ss_dssp HCCTTCEEEETTCTTTTTTHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCT---TTCCC-CSCEEEEE
T ss_pred hcCCCCEEEEecCcCcHHHHHHHHhcCCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcH---HHhcc-ccCCCEEE
Confidence 344567899999999975554333 346999999999999876542 67788888 55553 57899999
Q ss_pred ecccccccCCHHHHHHHHHhhccCCcEEEEE
Q 022305 204 NVVSVDYLTKPIEVFKEMCQVLKPGGLAIVS 234 (299)
Q Consensus 204 s~~~l~~~~d~~~~l~ei~rvLkpGG~lii~ 234 (299)
++. .+....++..+.++|||||.+.+-
T Consensus 198 ~~~----p~~~~~~l~~a~~~lk~gG~ih~~ 224 (278)
T 3k6r_A 198 MGY----VVRTHEFIPKALSIAKDGAIIHYH 224 (278)
T ss_dssp ECC----CSSGGGGHHHHHHHEEEEEEEEEE
T ss_pred ECC----CCcHHHHHHHHHHHcCCCCEEEEE
Confidence 763 234456788889999999988663
No 251
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=98.50 E-value=8.8e-08 Score=89.68 Aligned_cols=100 Identities=11% Similarity=0.089 Sum_probs=69.3
Q ss_pred CceeeccCcCCccccC-----------------CCCCCCeEEEEeCCHHHH-------HhcCC-------------CCcE
Q 022305 139 SEVFPPSNTPGVSHFP-----------------PGYKQDRIVGMGMNEEEL-------KRNPV-------------LTEY 181 (299)
Q Consensus 139 ~~vLDiGcG~G~~~~~-----------------~~~~~~~v~gvD~S~~ml-------~~a~~-------------~~~~ 181 (299)
.+|+|+|||+|...+. ...+..+|...|+-.+.. ...++ ..-|
T Consensus 54 ~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~~f 133 (374)
T 3b5i_A 54 FTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRSYF 133 (374)
T ss_dssp EEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBCSE
T ss_pred eEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCceE
Confidence 4699999999952111 122456888889887764 22211 1235
Q ss_pred EEeccCCCCCCCCCCCCeeEEEecccccccC--------------------------------------CHHHHHHHHHh
Q 022305 182 VVQDLNLNPKLPFEDNSFDVITNVVSVDYLT--------------------------------------KPIEVFKEMCQ 223 (299)
Q Consensus 182 ~~~D~~~~~~lpf~~~~FD~Vis~~~l~~~~--------------------------------------d~~~~l~ei~r 223 (299)
+.+....-..-.|++++||+|+|+.+|||+. |...+|+..++
T Consensus 134 ~~gvpgSFy~rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~ra~ 213 (374)
T 3b5i_A 134 VAGVPGSFYRRLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRARAA 213 (374)
T ss_dssp EEEEESCTTSCCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEecChhhhcccCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5555421133458999999999999999997 33456888999
Q ss_pred hccCCcEEEEEecCc
Q 022305 224 VLKPGGLAIVSFSNR 238 (299)
Q Consensus 224 vLkpGG~lii~~~~~ 238 (299)
.|||||.+++++..+
T Consensus 214 eL~pGG~mvl~~~gr 228 (374)
T 3b5i_A 214 EVKRGGAMFLVCLGR 228 (374)
T ss_dssp HEEEEEEEEEEEEEC
T ss_pred HhCCCCEEEEEEecC
Confidence 999999999987653
No 252
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.48 E-value=7.5e-08 Score=92.14 Aligned_cols=96 Identities=17% Similarity=0.160 Sum_probs=68.8
Q ss_pred CCceeeccCcCCccccCCC---------------CCCCeEEEEeCCHHHHHhcCC----------CCcEEEeccCCCCCC
Q 022305 138 YSEVFPPSNTPGVSHFPPG---------------YKQDRIVGMGMNEEELKRNPV----------LTEYVVQDLNLNPKL 192 (299)
Q Consensus 138 ~~~vLDiGcG~G~~~~~~~---------------~~~~~v~gvD~S~~ml~~a~~----------~~~~~~~D~~~~~~l 192 (299)
..+|||+|||+|....... ....+++|+|+++.+++.|+. ..++.++|. ...
T Consensus 172 ~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~~~~~~~i~~gD~---l~~ 248 (445)
T 2okc_A 172 GETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIGTDRSPIVCEDS---LEK 248 (445)
T ss_dssp TCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTCCSSCCSEEECCT---TTS
T ss_pred CCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCCCcCCCCEeeCCC---CCC
Confidence 4589999999996222111 024689999999999987653 357888887 444
Q ss_pred CCCCCCeeEEEecccccccCC-----------------HHHHHHHHHhhccCCcEEEEEecC
Q 022305 193 PFEDNSFDVITNVVSVDYLTK-----------------PIEVFKEMCQVLKPGGLAIVSFSN 237 (299)
Q Consensus 193 pf~~~~FD~Vis~~~l~~~~d-----------------~~~~l~ei~rvLkpGG~lii~~~~ 237 (299)
+.. ++||+|+++--+.+... ...+++.+.+.|||||.+++.+++
T Consensus 249 ~~~-~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~p~ 309 (445)
T 2okc_A 249 EPS-TLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVLPD 309 (445)
T ss_dssp CCS-SCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEEEH
T ss_pred ccc-CCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEECC
Confidence 433 48999999854443211 147899999999999998887764
No 253
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=98.47 E-value=2.1e-08 Score=93.67 Aligned_cols=101 Identities=7% Similarity=-0.015 Sum_probs=66.8
Q ss_pred HHHHHhhhcCCceeeccCcCCccccCCCCCCCeEEEEeCCHHHHHhcCC--------CCcEEEeccCCCCCC-C-CCC--
Q 022305 129 PAIAALTKYYSEVFPPSNTPGVSHFPPGYKQDRIVGMGMNEEELKRNPV--------LTEYVVQDLNLNPKL-P-FED-- 196 (299)
Q Consensus 129 ~~~~~l~~~~~~vLDiGcG~G~~~~~~~~~~~~v~gvD~S~~ml~~a~~--------~~~~~~~D~~~~~~l-p-f~~-- 196 (299)
.+++.+.....+|||+|||+|...+.......+|+|+|+|+.|++.|++ +++++.+|+ +++ + +.+
T Consensus 205 ~~~~~~~~~~~~vLDl~cG~G~~~l~la~~~~~V~gvd~~~~ai~~a~~n~~~ng~~~v~~~~~d~---~~~~~~~~~~~ 281 (369)
T 3bt7_A 205 WALDVTKGSKGDLLELYCGNGNFSLALARNFDRVLATEIAKPSVAAAQYNIAANHIDNVQIIRMAA---EEFTQAMNGVR 281 (369)
T ss_dssp HHHHHTTTCCSEEEEESCTTSHHHHHHGGGSSEEEEECCCHHHHHHHHHHHHHTTCCSEEEECCCS---HHHHHHHSSCC
T ss_pred HHHHHhhcCCCEEEEccCCCCHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECCH---HHHHHHHhhcc
Confidence 3344333224689999999998555444455799999999999987654 367888887 433 1 121
Q ss_pred ------------CCeeEEEecccccccCCHHHHHHHHHhhccCCcEEEEEecCc
Q 022305 197 ------------NSFDVITNVVSVDYLTKPIEVFKEMCQVLKPGGLAIVSFSNR 238 (299)
Q Consensus 197 ------------~~FD~Vis~~~l~~~~d~~~~l~ei~rvLkpGG~lii~~~~~ 238 (299)
++||+|+..--- ..+..++.+.|+++|.+++...++
T Consensus 282 ~~~~l~~~~~~~~~fD~Vv~dPPr------~g~~~~~~~~l~~~g~ivyvsc~p 329 (369)
T 3bt7_A 282 EFNRLQGIDLKSYQCETIFVDPPR------SGLDSETEKMVQAYPRILYISCNP 329 (369)
T ss_dssp CCTTGGGSCGGGCCEEEEEECCCT------TCCCHHHHHHHTTSSEEEEEESCH
T ss_pred ccccccccccccCCCCEEEECcCc------cccHHHHHHHHhCCCEEEEEECCH
Confidence 379999864110 123467788888999776654443
No 254
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=98.47 E-value=3.9e-08 Score=92.82 Aligned_cols=76 Identities=14% Similarity=0.139 Sum_probs=55.2
Q ss_pred CeEEEEeCCHHHHHhcCC---------CCcEEEeccCCCCCCCCCCCCeeEEEec--ccccc--cCCHHHHHHHHHhhcc
Q 022305 160 DRIVGMGMNEEELKRNPV---------LTEYVVQDLNLNPKLPFEDNSFDVITNV--VSVDY--LTKPIEVFKEMCQVLK 226 (299)
Q Consensus 160 ~~v~gvD~S~~ml~~a~~---------~~~~~~~D~~~~~~lpf~~~~FD~Vis~--~~l~~--~~d~~~~l~ei~rvLk 226 (299)
.+|+|+|+|+.|++.|++ .++++++|+ .+++.+ ++||+|+++ +.... -.+...+.+++.++||
T Consensus 264 ~~V~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~---~~~~~~-~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk 339 (393)
T 3k0b_A 264 LNIIGGDIDARLIEIAKQNAVEAGLGDLITFRQLQV---ADFQTE-DEYGVVVANPPYGERLEDEEAVRQLYREMGIVYK 339 (393)
T ss_dssp CCEEEEESCHHHHHHHHHHHHHTTCTTCSEEEECCG---GGCCCC-CCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECCh---HhCCCC-CCCCEEEECCCCccccCCchhHHHHHHHHHHHHh
Confidence 569999999999997765 278999999 677664 489999998 32211 1244556777777777
Q ss_pred C--CcEEEEEecCcc
Q 022305 227 P--GGLAIVSFSNRC 239 (299)
Q Consensus 227 p--GG~lii~~~~~~ 239 (299)
+ ||.+++-+++..
T Consensus 340 ~~~g~~~~iit~~~~ 354 (393)
T 3k0b_A 340 RMPTWSVYVLTSYEL 354 (393)
T ss_dssp TCTTCEEEEEECCTT
T ss_pred cCCCCEEEEEECCHH
Confidence 6 887777666654
No 255
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=98.44 E-value=4.7e-07 Score=84.25 Aligned_cols=99 Identities=11% Similarity=0.067 Sum_probs=71.0
Q ss_pred CceeeccCcCCccccCC------------------CCCCCeEEEEeCCHHHHHhcCC---------CCcEEEeccCCCCC
Q 022305 139 SEVFPPSNTPGVSHFPP------------------GYKQDRIVGMGMNEEELKRNPV---------LTEYVVQDLNLNPK 191 (299)
Q Consensus 139 ~~vLDiGcG~G~~~~~~------------------~~~~~~v~gvD~S~~ml~~a~~---------~~~~~~~D~~~~~~ 191 (299)
-+|+|+||++|...+.. ..+..+|+..|+..++....-+ ..-|+.+....-..
T Consensus 53 ~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgSFy~ 132 (359)
T 1m6e_X 53 LAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGSFYG 132 (359)
T ss_dssp ECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESCSSS
T ss_pred eEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecchhhhh
Confidence 36999999999633321 2345688999998887763221 23466666521134
Q ss_pred CCCCCCCeeEEEecccccccCCHH---------------------------------HHHHHHHhhccCCcEEEEEecC
Q 022305 192 LPFEDNSFDVITNVVSVDYLTKPI---------------------------------EVFKEMCQVLKPGGLAIVSFSN 237 (299)
Q Consensus 192 lpf~~~~FD~Vis~~~l~~~~d~~---------------------------------~~l~ei~rvLkpGG~lii~~~~ 237 (299)
-.|+++++|+|+|+.+|||+.+.+ .+|+..++.|+|||.+++++..
T Consensus 133 rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl~~~g 211 (359)
T 1m6e_X 133 RLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTILG 211 (359)
T ss_dssp CCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEEEEE
T ss_pred ccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEEec
Confidence 578999999999999999996522 3488889999999999998754
No 256
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=98.42 E-value=6.8e-08 Score=90.87 Aligned_cols=77 Identities=10% Similarity=0.057 Sum_probs=56.7
Q ss_pred CeEEEEeCCHHHHHhcCCC---------CcEEEeccCCCCCCCCCCCCeeEEEec--ccccc--cCCHHHHHHHHHhhcc
Q 022305 160 DRIVGMGMNEEELKRNPVL---------TEYVVQDLNLNPKLPFEDNSFDVITNV--VSVDY--LTKPIEVFKEMCQVLK 226 (299)
Q Consensus 160 ~~v~gvD~S~~ml~~a~~~---------~~~~~~D~~~~~~lpf~~~~FD~Vis~--~~l~~--~~d~~~~l~ei~rvLk 226 (299)
.+++|+|+|+.|++.|+++ ++++++|+ .+++.+ .+||+|+++ +.... -.+...+.+++.+.||
T Consensus 257 ~~v~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~---~~l~~~-~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk 332 (384)
T 3ldg_A 257 LDISGFDFDGRMVEIARKNAREVGLEDVVKLKQMRL---QDFKTN-KINGVLISNPPYGERLLDDKAVDILYNEMGETFA 332 (384)
T ss_dssp CCEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCG---GGCCCC-CCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHT
T ss_pred ceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECCh---HHCCcc-CCcCEEEECCchhhccCCHHHHHHHHHHHHHHHh
Confidence 4699999999999977652 67899999 677665 489999998 33221 1245667777888887
Q ss_pred C--CcEEEEEecCcch
Q 022305 227 P--GGLAIVSFSNRCF 240 (299)
Q Consensus 227 p--GG~lii~~~~~~~ 240 (299)
+ ||.+.+-+++..+
T Consensus 333 ~~~g~~~~iit~~~~l 348 (384)
T 3ldg_A 333 PLKTWSQFILTNDTDF 348 (384)
T ss_dssp TCTTSEEEEEESCTTH
T ss_pred hCCCcEEEEEECCHHH
Confidence 7 8887777776543
No 257
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=98.42 E-value=2.9e-07 Score=86.36 Aligned_cols=100 Identities=9% Similarity=0.025 Sum_probs=68.1
Q ss_pred CceeeccCcCCcc----------ccCC---------CCCCCeEEEEeCC-----------HHHHHhcCC------CCcEE
Q 022305 139 SEVFPPSNTPGVS----------HFPP---------GYKQDRIVGMGMN-----------EEELKRNPV------LTEYV 182 (299)
Q Consensus 139 ~~vLDiGcG~G~~----------~~~~---------~~~~~~v~gvD~S-----------~~ml~~a~~------~~~~~ 182 (299)
.+|+|+||++|.. .+.. ..+..+|+..|+- +.+.+..++ ..-|+
T Consensus 54 ~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g~~~~~~f~ 133 (384)
T 2efj_A 54 FKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENGRKIGSCLI 133 (384)
T ss_dssp EEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTCCCTTSEEE
T ss_pred eEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhccCCCCceEE
Confidence 4699999999951 1111 1244678888988 554432211 23566
Q ss_pred EeccCCCCCCCCCCCCeeEEEecccccccCCHHH------------------------H---------------HHHHHh
Q 022305 183 VQDLNLNPKLPFEDNSFDVITNVVSVDYLTKPIE------------------------V---------------FKEMCQ 223 (299)
Q Consensus 183 ~~D~~~~~~lpf~~~~FD~Vis~~~l~~~~d~~~------------------------~---------------l~ei~r 223 (299)
.+....-..-.|++++||+|+|+.+|||+.+.+. + |+..++
T Consensus 134 ~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL~~Ra~ 213 (384)
T 2efj_A 134 GAMPGSFYSRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFLRIHSE 213 (384)
T ss_dssp EECCSCTTSCCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EecchhhhhccCCCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7766322334689999999999999999965431 2 555589
Q ss_pred hccCCcEEEEEecCc
Q 022305 224 VLKPGGLAIVSFSNR 238 (299)
Q Consensus 224 vLkpGG~lii~~~~~ 238 (299)
.|||||.+++++..+
T Consensus 214 eL~pGG~mvl~~~gr 228 (384)
T 2efj_A 214 ELISRGRMLLTFICK 228 (384)
T ss_dssp HEEEEEEEEEEEECC
T ss_pred HhccCCeEEEEEecC
Confidence 999999999998764
No 258
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.42 E-value=7.5e-09 Score=91.30 Aligned_cols=64 Identities=11% Similarity=0.142 Sum_probs=47.3
Q ss_pred CCceeeccCcCCccccCCCCCCCeEEEEeCCHHHHHhcCC------CCcEEEeccCCCCCCCCCC-CCeeEEEec
Q 022305 138 YSEVFPPSNTPGVSHFPPGYKQDRIVGMGMNEEELKRNPV------LTEYVVQDLNLNPKLPFED-NSFDVITNV 205 (299)
Q Consensus 138 ~~~vLDiGcG~G~~~~~~~~~~~~v~gvD~S~~ml~~a~~------~~~~~~~D~~~~~~lpf~~-~~FD~Vis~ 205 (299)
..+|||+|||+|.........+.+|+|+|+|+.|++.+++ +++++.+|+ .++++++ ..| .|+++
T Consensus 31 ~~~VLDiG~G~G~lt~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~D~---~~~~~~~~~~~-~vv~n 101 (244)
T 1qam_A 31 HDNIFEIGSGKGHFTLELVQRCNFVTAIEIDHKLCKTTENKLVDHDNFQVLNKDI---LQFKFPKNQSY-KIFGN 101 (244)
T ss_dssp TCEEEEECCTTSHHHHHHHHHSSEEEEECSCHHHHHHHHHHTTTCCSEEEECCCG---GGCCCCSSCCC-EEEEE
T ss_pred CCEEEEEeCCchHHHHHHHHcCCeEEEEECCHHHHHHHHHhhccCCCeEEEEChH---HhCCcccCCCe-EEEEe
Confidence 4689999999997443333334899999999999987654 478899999 7888764 456 45554
No 259
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=98.36 E-value=9e-08 Score=90.05 Aligned_cols=76 Identities=18% Similarity=0.192 Sum_probs=56.2
Q ss_pred CeEEEEeCCHHHHHhcCCC---------CcEEEeccCCCCCCCCCCCCeeEEEeccccc-cc---CCHHHHHHHHHhhcc
Q 022305 160 DRIVGMGMNEEELKRNPVL---------TEYVVQDLNLNPKLPFEDNSFDVITNVVSVD-YL---TKPIEVFKEMCQVLK 226 (299)
Q Consensus 160 ~~v~gvD~S~~ml~~a~~~---------~~~~~~D~~~~~~lpf~~~~FD~Vis~~~l~-~~---~d~~~~l~ei~rvLk 226 (299)
.+|+|+|+++.|++.|+++ +++.++|+ .+++.+ ++||+|+++--.. .+ .+...+.+++.++||
T Consensus 258 ~~V~GvDid~~ai~~Ar~Na~~~gl~~~i~~~~~D~---~~l~~~-~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk 333 (385)
T 3ldu_A 258 FKIYGYDIDEESIDIARENAEIAGVDEYIEFNVGDA---TQFKSE-DEFGFIITNPPYGERLEDKDSVKQLYKELGYAFR 333 (385)
T ss_dssp CCEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCG---GGCCCS-CBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECCh---hhcCcC-CCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHh
Confidence 5799999999999987653 67899999 666654 5899999974321 12 345667788888888
Q ss_pred C--CcEEEEEecCcc
Q 022305 227 P--GGLAIVSFSNRC 239 (299)
Q Consensus 227 p--GG~lii~~~~~~ 239 (299)
+ ||.+.+-+++..
T Consensus 334 ~~~g~~~~iit~~~~ 348 (385)
T 3ldu_A 334 KLKNWSYYLITSYED 348 (385)
T ss_dssp TSBSCEEEEEESCTT
T ss_pred hCCCCEEEEEECCHH
Confidence 7 887777666654
No 260
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.35 E-value=5.9e-08 Score=88.12 Aligned_cols=69 Identities=9% Similarity=0.024 Sum_probs=54.9
Q ss_pred cCCceeeccCcCCccccCCCCCCCeEEEEeCCHHHHHhcCC------CCcEEEeccCCCCCCCCCCCCeeEEEecccc
Q 022305 137 YYSEVFPPSNTPGVSHFPPGYKQDRIVGMGMNEEELKRNPV------LTEYVVQDLNLNPKLPFEDNSFDVITNVVSV 208 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~~~~~~~~~~~v~gvD~S~~ml~~a~~------~~~~~~~D~~~~~~lpf~~~~FD~Vis~~~l 208 (299)
...+|||+|||+|.........+.+|+|+|+++.|++.+++ +++++++|+ .++++++.+||.|+++.-.
T Consensus 50 ~~~~VLEIG~G~G~lT~~La~~~~~V~aVEid~~li~~a~~~~~~~~~v~vi~gD~---l~~~~~~~~fD~Iv~NlPy 124 (295)
T 3gru_A 50 KDDVVLEIGLGKGILTEELAKNAKKVYVIEIDKSLEPYANKLKELYNNIEIIWGDA---LKVDLNKLDFNKVVANLPY 124 (295)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHSSEEEEEESCGGGHHHHHHHHHHCSSEEEEESCT---TTSCGGGSCCSEEEEECCG
T ss_pred CcCEEEEECCCchHHHHHHHhcCCEEEEEECCHHHHHHHHHHhccCCCeEEEECch---hhCCcccCCccEEEEeCcc
Confidence 34689999999997443333336799999999999987654 478999999 8888888889999988544
No 261
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.33 E-value=8.8e-07 Score=78.97 Aligned_cols=98 Identities=9% Similarity=-0.009 Sum_probs=63.8
Q ss_pred cCCceeeccCcCCcccc--CCCCCCCeEEEEeCCHHHHHhcCC------CCcEEEeccCCCCCCCCCCCCeeEEEecccc
Q 022305 137 YYSEVFPPSNTPGVSHF--PPGYKQDRIVGMGMNEEELKRNPV------LTEYVVQDLNLNPKLPFEDNSFDVITNVVSV 208 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~~~--~~~~~~~~v~gvD~S~~ml~~a~~------~~~~~~~D~~~~~~lpf~~~~FD~Vis~~~l 208 (299)
...+|||+|||+|.-.. ....+...++|+|++..+...... .+.....++ +...++++.||+|+|..+.
T Consensus 74 ~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl~~~pi~~~~~g~~ii~~~~~~---dv~~l~~~~~DlVlsD~ap 150 (277)
T 3evf_A 74 LEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGHEKPMNVQSLGWNIITFKDKT---DIHRLEPVKCDTLLCDIGE 150 (277)
T ss_dssp CCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTCCCCCCCCBTTGGGEEEECSC---CTTTSCCCCCSEEEECCCC
T ss_pred CCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccCcccccccCcCCCCeEEEeccc---eehhcCCCCccEEEecCcc
Confidence 34579999999996222 222334578889988654211111 234455555 4456778899999998755
Q ss_pred c----ccCCHH--HHHHHHHhhccCC-cEEEEEecC
Q 022305 209 D----YLTKPI--EVFKEMCQVLKPG-GLAIVSFSN 237 (299)
Q Consensus 209 ~----~~~d~~--~~l~ei~rvLkpG-G~lii~~~~ 237 (299)
+ ++++.. .+|+.+.++|||| |.|++.+-.
T Consensus 151 nsG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~KVf~ 186 (277)
T 3evf_A 151 SSSSSVTEGERTVRVLDTVEKWLACGVDNFCVKVLA 186 (277)
T ss_dssp CCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESC
T ss_pred CcCchHHHHHHHHHHHHHHHHHhCCCCCeEEEEecC
Confidence 5 222222 3468889999999 999997654
No 262
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.31 E-value=1.7e-07 Score=87.07 Aligned_cols=96 Identities=16% Similarity=0.144 Sum_probs=64.9
Q ss_pred CCceeeccCcCCcccc-CCCCCCCeEEEEeCCHHHHHhcCCC----------------CcEEEeccCCCCCCCC----CC
Q 022305 138 YSEVFPPSNTPGVSHF-PPGYKQDRIVGMGMNEEELKRNPVL----------------TEYVVQDLNLNPKLPF----ED 196 (299)
Q Consensus 138 ~~~vLDiGcG~G~~~~-~~~~~~~~v~gvD~S~~ml~~a~~~----------------~~~~~~D~~~~~~lpf----~~ 196 (299)
..+||++|||.|.... ....+..+|++||+++.+++.|++. ++++.+|. ....- .+
T Consensus 189 pkrVL~IGgG~G~~arellk~~~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da---~~~L~~~~~~~ 265 (364)
T 2qfm_A 189 GKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDC---IPVLKRYAKEG 265 (364)
T ss_dssp TCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCH---HHHHHHHHHHT
T ss_pred CCEEEEEECChhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcH---HHHHHhhhccC
Confidence 4689999999886222 2223347899999999999976542 45667776 33211 35
Q ss_pred CCeeEEEecccc-cccCCH-----HHHHHHH----HhhccCCcEEEEEec
Q 022305 197 NSFDVITNVVSV-DYLTKP-----IEVFKEM----CQVLKPGGLAIVSFS 236 (299)
Q Consensus 197 ~~FD~Vis~~~l-~~~~d~-----~~~l~ei----~rvLkpGG~lii~~~ 236 (299)
++||+|++-..- ..-..+ .++++++ .++|+|||.+++...
T Consensus 266 ~~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs~ 315 (364)
T 2qfm_A 266 REFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGN 315 (364)
T ss_dssp CCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred CCceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEcC
Confidence 789999986432 111112 4666666 899999999988644
No 263
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=98.22 E-value=1.6e-06 Score=79.10 Aligned_cols=97 Identities=13% Similarity=0.075 Sum_probs=63.6
Q ss_pred cCCceeeccCcCCcc--ccCCCC-CCCeEEEEeCCHHHHHhcCC--------CCcEEEeccCCCCCCCCCC---CCeeEE
Q 022305 137 YYSEVFPPSNTPGVS--HFPPGY-KQDRIVGMGMNEEELKRNPV--------LTEYVVQDLNLNPKLPFED---NSFDVI 202 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~--~~~~~~-~~~~v~gvD~S~~ml~~a~~--------~~~~~~~D~~~~~~lpf~~---~~FD~V 202 (299)
...+|||+|||+|.. +++... ...+|+++|+++.+++.+++ +++++.+|+ ..++... ++||.|
T Consensus 102 ~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~~~v~~~~~D~---~~~~~~~~~~~~fD~V 178 (309)
T 2b9e_A 102 PGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDF---LAVSPSDPRYHEVHYI 178 (309)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCG---GGSCTTCGGGTTEEEE
T ss_pred CCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCCh---HhcCccccccCCCCEE
Confidence 456899999999962 233222 34799999999999986553 367888898 5554322 579999
Q ss_pred Eec------ccccccC-----------CH-------HHHHHHHHhhccCCcEEEEEecC
Q 022305 203 TNV------VSVDYLT-----------KP-------IEVFKEMCQVLKPGGLAIVSFSN 237 (299)
Q Consensus 203 is~------~~l~~~~-----------d~-------~~~l~ei~rvLkpGG~lii~~~~ 237 (299)
++. .++..-+ +. .++|+.+.+.|| ||.++.++..
T Consensus 179 l~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTCs 236 (309)
T 2b9e_A 179 LLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYSTCS 236 (309)
T ss_dssp EECCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEESC
T ss_pred EEcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECCC
Confidence 952 1222111 21 246778888887 9988877543
No 264
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.22 E-value=5.3e-07 Score=80.08 Aligned_cols=65 Identities=6% Similarity=-0.039 Sum_probs=50.2
Q ss_pred cCCceeeccCcCCccccCCCCCCCeEEEEeCCHHHHHhcCC------CCcEEEeccCCCCCCCCCC----CCeeEEEec
Q 022305 137 YYSEVFPPSNTPGVSHFPPGYKQDRIVGMGMNEEELKRNPV------LTEYVVQDLNLNPKLPFED----NSFDVITNV 205 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~~~~~~~~~~~v~gvD~S~~ml~~a~~------~~~~~~~D~~~~~~lpf~~----~~FD~Vis~ 205 (299)
...+|||+|||+|.........+.+|+|+|+++.|++.+++ +++++++|+ .++++++ +.|| |+++
T Consensus 29 ~~~~VLEIG~G~G~lt~~La~~~~~V~avEid~~~~~~~~~~~~~~~~v~~i~~D~---~~~~~~~~~~~~~~~-vv~N 103 (255)
T 3tqs_A 29 KTDTLVEIGPGRGALTDYLLTECDNLALVEIDRDLVAFLQKKYNQQKNITIYQNDA---LQFDFSSVKTDKPLR-VVGN 103 (255)
T ss_dssp TTCEEEEECCTTTTTHHHHTTTSSEEEEEECCHHHHHHHHHHHTTCTTEEEEESCT---TTCCGGGSCCSSCEE-EEEE
T ss_pred CcCEEEEEcccccHHHHHHHHhCCEEEEEECCHHHHHHHHHHHhhCCCcEEEEcch---HhCCHHHhccCCCeE-EEec
Confidence 45689999999997555444456899999999999987654 478999999 7777643 5688 6665
No 265
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=98.12 E-value=6.7e-07 Score=83.88 Aligned_cols=92 Identities=13% Similarity=0.082 Sum_probs=65.2
Q ss_pred CCceeeccCcCCccccC--CCCCCCeEEEEeCCHHHHHhcCCC-----------------------CcEEEeccCCCCCC
Q 022305 138 YSEVFPPSNTPGVSHFP--PGYKQDRIVGMGMNEEELKRNPVL-----------------------TEYVVQDLNLNPKL 192 (299)
Q Consensus 138 ~~~vLDiGcG~G~~~~~--~~~~~~~v~gvD~S~~ml~~a~~~-----------------------~~~~~~D~~~~~~l 192 (299)
..+|||+|||+|...+. ...+..+|+++|+++.+++.++++ ++++.+|+ ..+
T Consensus 48 ~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da---~~~ 124 (378)
T 2dul_A 48 PKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDA---NRL 124 (378)
T ss_dssp CSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCH---HHH
T ss_pred CCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcH---HHH
Confidence 46899999999974332 222456899999999998755431 55677777 333
Q ss_pred C-CCCCCeeEEEecccccccCCHHHHHHHHHhhccCCcEEEEEec
Q 022305 193 P-FEDNSFDVITNVVSVDYLTKPIEVFKEMCQVLKPGGLAIVSFS 236 (299)
Q Consensus 193 p-f~~~~FD~Vis~~~l~~~~d~~~~l~ei~rvLkpGG~lii~~~ 236 (299)
. ...++||+|+..- ...+..++..+.+.|||||.++++..
T Consensus 125 ~~~~~~~fD~I~lDP----~~~~~~~l~~a~~~lk~gG~l~vt~t 165 (378)
T 2dul_A 125 MAERHRYFHFIDLDP----FGSPMEFLDTALRSAKRRGILGVTAT 165 (378)
T ss_dssp HHHSTTCEEEEEECC----SSCCHHHHHHHHHHEEEEEEEEEEEC
T ss_pred HHhccCCCCEEEeCC----CCCHHHHHHHHHHhcCCCCEEEEEee
Confidence 2 1245799999542 12457889999999999998888753
No 266
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.10 E-value=5.1e-07 Score=80.34 Aligned_cols=70 Identities=9% Similarity=0.066 Sum_probs=51.8
Q ss_pred CCceeeccCcCCccccCCCCCCCeEEEEeCCH-------HHHHhcCC---------CCcEEEeccCCCCCC-C-CCC--C
Q 022305 138 YSEVFPPSNTPGVSHFPPGYKQDRIVGMGMNE-------EELKRNPV---------LTEYVVQDLNLNPKL-P-FED--N 197 (299)
Q Consensus 138 ~~~vLDiGcG~G~~~~~~~~~~~~v~gvD~S~-------~ml~~a~~---------~~~~~~~D~~~~~~l-p-f~~--~ 197 (299)
..+|||+|||+|...+.....+.+|+|+|+|+ .+++.+++ +++++.+|. ..+ + +++ +
T Consensus 84 ~~~VLDlgcG~G~~a~~lA~~g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~---~~~l~~~~~~~~ 160 (258)
T 2r6z_A 84 HPTVWDATAGLGRDSFVLASLGLTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNA---AEQMPALVKTQG 160 (258)
T ss_dssp CCCEEETTCTTCHHHHHHHHTTCCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCH---HHHHHHHHHHHC
T ss_pred cCeEEEeeCccCHHHHHHHHhCCEEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCH---HHHHHhhhccCC
Confidence 46899999999985544433478999999999 99887754 278899998 443 3 444 7
Q ss_pred CeeEEEecccccc
Q 022305 198 SFDVITNVVSVDY 210 (299)
Q Consensus 198 ~FD~Vis~~~l~~ 210 (299)
+||+|++.-.+++
T Consensus 161 ~fD~V~~dP~~~~ 173 (258)
T 2r6z_A 161 KPDIVYLDPMYPE 173 (258)
T ss_dssp CCSEEEECCCC--
T ss_pred CccEEEECCCCCC
Confidence 8999999755544
No 267
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.09 E-value=7.2e-07 Score=90.10 Aligned_cols=77 Identities=10% Similarity=0.127 Sum_probs=52.8
Q ss_pred CeEEEEeCCHHHHHhcCCC---------CcEEEeccCCCCCC--CCCCCCeeEEEec--cccccc--CCHHH---HHHHH
Q 022305 160 DRIVGMGMNEEELKRNPVL---------TEYVVQDLNLNPKL--PFEDNSFDVITNV--VSVDYL--TKPIE---VFKEM 221 (299)
Q Consensus 160 ~~v~gvD~S~~ml~~a~~~---------~~~~~~D~~~~~~l--pf~~~~FD~Vis~--~~l~~~--~d~~~---~l~ei 221 (299)
.+++|+|+++.|++.|+.+ +++.++|+ .++ |..+++||+|+++ +....- .+... .|.++
T Consensus 257 ~~i~G~Did~~av~~A~~N~~~agv~~~i~~~~~D~---~~~~~~~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~l~~~ 333 (703)
T 3v97_A 257 SHFYGSDSDARVIQRARTNARLAGIGELITFEVKDV---AQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRI 333 (703)
T ss_dssp CCEEEEESCHHHHHHHHHHHHHTTCGGGEEEEECCG---GGCCCSCTTCCCCEEEECCCCCC---CCHHHHHHHHHHHHH
T ss_pred ccEEEEECCHHHHHHHHHHHHHcCCCCceEEEECCh---hhCccccccCCCCEEEeCCCccccccchhHHHHHHHHHHHH
Confidence 5899999999999987653 68899998 555 4445589999998 332211 12333 44555
Q ss_pred HhhccCCcEEEEEecCcc
Q 022305 222 CQVLKPGGLAIVSFSNRC 239 (299)
Q Consensus 222 ~rvLkpGG~lii~~~~~~ 239 (299)
.+.+.|||.+++-+++..
T Consensus 334 lk~~~~g~~~~ilt~~~~ 351 (703)
T 3v97_A 334 MKNQFGGWNLSLFSASPD 351 (703)
T ss_dssp HHHHCTTCEEEEEESCHH
T ss_pred HHhhCCCCeEEEEeCCHH
Confidence 566668998887777643
No 268
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.06 E-value=9.7e-07 Score=79.10 Aligned_cols=64 Identities=13% Similarity=0.019 Sum_probs=50.3
Q ss_pred ceeeccCcCCccccCCCCCCCeEEEEeCCHHHHHhcCC-----CCcEEEeccCCCCCCCCCCC-CeeEEEecc
Q 022305 140 EVFPPSNTPGVSHFPPGYKQDRIVGMGMNEEELKRNPV-----LTEYVVQDLNLNPKLPFEDN-SFDVITNVV 206 (299)
Q Consensus 140 ~vLDiGcG~G~~~~~~~~~~~~v~gvD~S~~ml~~a~~-----~~~~~~~D~~~~~~lpf~~~-~FD~Vis~~ 206 (299)
+|||+|||+|.........+.+|+|+|+++.|++.+++ +++++++|+ .++++++. .||.|+++.
T Consensus 49 ~VLEIG~G~G~lt~~L~~~~~~V~avEid~~~~~~l~~~~~~~~v~vi~~D~---l~~~~~~~~~~~~iv~Nl 118 (271)
T 3fut_A 49 PVFEVGPGLGALTRALLEAGAEVTAIEKDLRLRPVLEETLSGLPVRLVFQDA---LLYPWEEVPQGSLLVANL 118 (271)
T ss_dssp CEEEECCTTSHHHHHHHHTTCCEEEEESCGGGHHHHHHHTTTSSEEEEESCG---GGSCGGGSCTTEEEEEEE
T ss_pred eEEEEeCchHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcCCCCEEEEECCh---hhCChhhccCccEEEecC
Confidence 99999999997444333345899999999999987654 478999999 77777643 689988885
No 269
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=97.97 E-value=2e-06 Score=84.37 Aligned_cols=97 Identities=9% Similarity=0.069 Sum_probs=66.7
Q ss_pred CCceeeccCcCCccccC------CCC--------------CCCeEEEEeCCHHHHHhcCCC-------------CcEEEe
Q 022305 138 YSEVFPPSNTPGVSHFP------PGY--------------KQDRIVGMGMNEEELKRNPVL-------------TEYVVQ 184 (299)
Q Consensus 138 ~~~vLDiGcG~G~~~~~------~~~--------------~~~~v~gvD~S~~ml~~a~~~-------------~~~~~~ 184 (299)
..+|+|++||+|...+. ... ...+++|+|+++.+++.|+.+ ..+.++
T Consensus 170 ~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~gi~~~~~~~~~I~~g 249 (541)
T 2ar0_A 170 REVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHDIEGNLDHGGAIRLG 249 (541)
T ss_dssp TCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTTTCCCBGGGTBSEEES
T ss_pred CCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHhCCCccccccCCeEeC
Confidence 45899999999962211 111 124799999999999876531 467788
Q ss_pred ccCCCCCCC-CCCCCeeEEEecccccccC-------------C-HHHHHHHHHhhccCCcEEEEEecC
Q 022305 185 DLNLNPKLP-FEDNSFDVITNVVSVDYLT-------------K-PIEVFKEMCQVLKPGGLAIVSFSN 237 (299)
Q Consensus 185 D~~~~~~lp-f~~~~FD~Vis~~~l~~~~-------------d-~~~~l~ei~rvLkpGG~lii~~~~ 237 (299)
|. ...+ ...+.||+|+++--+.... + ...++..+.+.|||||.+.+.+++
T Consensus 250 Dt---L~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a~V~p~ 314 (541)
T 2ar0_A 250 NT---LGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAAVVVPD 314 (541)
T ss_dssp CT---TSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEEEEEEEEH
T ss_pred CC---cccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCEEEEEecC
Confidence 76 3332 4457899999973222211 1 236899999999999998887764
No 270
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=97.95 E-value=1.4e-05 Score=78.32 Aligned_cols=99 Identities=14% Similarity=0.101 Sum_probs=68.7
Q ss_pred cCCceeeccCcCCccccCC-----CCCCCeEEEEeCCHHHHHhcCC----------CCcEEEeccCCCCCC--C-CCCCC
Q 022305 137 YYSEVFPPSNTPGVSHFPP-----GYKQDRIVGMGMNEEELKRNPV----------LTEYVVQDLNLNPKL--P-FEDNS 198 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~~~~~-----~~~~~~v~gvD~S~~ml~~a~~----------~~~~~~~D~~~~~~l--p-f~~~~ 198 (299)
...+|+|++||+|...+.. ......++|+|+++.+...|+. ...+..+|. ... | +....
T Consensus 221 ~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~~~~I~~gDt---L~~d~p~~~~~~ 297 (542)
T 3lkd_A 221 QGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVPIENQFLHNADT---LDEDWPTQEPTN 297 (542)
T ss_dssp TTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCT---TTSCSCCSSCCC
T ss_pred CCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCCcCccceEecce---eccccccccccc
Confidence 3458999999999733321 1235789999999999987753 235777886 333 3 45688
Q ss_pred eeEEEec--ccccc-----------------cC---C-HHHHHHHHHhhcc-CCcEEEEEecCc
Q 022305 199 FDVITNV--VSVDY-----------------LT---K-PIEVFKEMCQVLK-PGGLAIVSFSNR 238 (299)
Q Consensus 199 FD~Vis~--~~l~~-----------------~~---d-~~~~l~ei~rvLk-pGG~lii~~~~~ 238 (299)
||+|+++ +...+ ++ + -..++..+.+.|| |||.+.+.+|+.
T Consensus 298 fD~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a~VlP~g 361 (542)
T 3lkd_A 298 FDGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMAIVLPHG 361 (542)
T ss_dssp BSEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEEEEEETH
T ss_pred ccEEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEEEEecch
Confidence 9999987 22111 10 0 1248899999999 999988877763
No 271
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=97.95 E-value=1.2e-05 Score=72.76 Aligned_cols=100 Identities=13% Similarity=0.095 Sum_probs=71.8
Q ss_pred hcCCceeeccCcCCc--cccCCCCCCCeEEEEeCCHHHHHhcCC-------------CCcEEEeccCCCCCCCCCCCCee
Q 022305 136 KYYSEVFPPSNTPGV--SHFPPGYKQDRIVGMGMNEEELKRNPV-------------LTEYVVQDLNLNPKLPFEDNSFD 200 (299)
Q Consensus 136 ~~~~~vLDiGcG~G~--~~~~~~~~~~~v~gvD~S~~ml~~a~~-------------~~~~~~~D~~~~~~lpf~~~~FD 200 (299)
....+||=+|.|.|. ..+....+..+|+.+||++.+++.+++ +++.+.+|.. .-+.-.+++||
T Consensus 82 p~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~--~~l~~~~~~yD 159 (294)
T 3o4f_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGV--NFVNQTSQTFD 159 (294)
T ss_dssp SCCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTT--TTTSCSSCCEE
T ss_pred CCCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHH--HHHhhccccCC
Confidence 456799999999885 333434455799999999999986543 3778889983 33445678899
Q ss_pred EEEecccccccC----CHHHHHHHHHhhccCCcEEEEEecC
Q 022305 201 VITNVVSVDYLT----KPIEVFKEMCQVLKPGGLAIVSFSN 237 (299)
Q Consensus 201 ~Vis~~~l~~~~----d~~~~l~ei~rvLkpGG~lii~~~~ 237 (299)
+|+.-..=..-+ --..+++.++++|+|||.++....+
T Consensus 160 vIi~D~~dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~q~~s 200 (294)
T 3o4f_A 160 VIISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNGV 200 (294)
T ss_dssp EEEESCCCCCCTTCCSSCCHHHHHHHHTEEEEEEEEEEEEE
T ss_pred EEEEeCCCcCCCchhhcCHHHHHHHHHHhCCCCEEEEecCC
Confidence 999653211111 1257899999999999999886543
No 272
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=97.94 E-value=1.5e-06 Score=81.81 Aligned_cols=93 Identities=11% Similarity=0.103 Sum_probs=66.6
Q ss_pred CCceeeccCcCCccccCCCC--CC-CeEEEEeCCHHHHHhcCCC----------CcEEEeccCCCCCC-C-CCCCCeeEE
Q 022305 138 YSEVFPPSNTPGVSHFPPGY--KQ-DRIVGMGMNEEELKRNPVL----------TEYVVQDLNLNPKL-P-FEDNSFDVI 202 (299)
Q Consensus 138 ~~~vLDiGcG~G~~~~~~~~--~~-~~v~gvD~S~~ml~~a~~~----------~~~~~~D~~~~~~l-p-f~~~~FD~V 202 (299)
..+|||++||+|...+.... .+ .+|+++|+++.+++.++++ ++++.+|+ ..+ . ...+.||+|
T Consensus 53 g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da---~~~l~~~~~~~fD~V 129 (392)
T 3axs_A 53 PVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEA---NFFLRKEWGFGFDYV 129 (392)
T ss_dssp CEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCH---HHHHHSCCSSCEEEE
T ss_pred CCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCH---HHHHHHhhCCCCcEE
Confidence 46899999999974443222 34 6899999999999866542 56677776 222 1 124579999
Q ss_pred EecccccccCCHHHHHHHHHhhccCCcEEEEEecC
Q 022305 203 TNVVSVDYLTKPIEVFKEMCQVLKPGGLAIVSFSN 237 (299)
Q Consensus 203 is~~~l~~~~d~~~~l~ei~rvLkpGG~lii~~~~ 237 (299)
++.- ...+..++..+.+.|||||+++++...
T Consensus 130 ~lDP----~g~~~~~l~~a~~~Lk~gGll~~t~t~ 160 (392)
T 3axs_A 130 DLDP----FGTPVPFIESVALSMKRGGILSLTATD 160 (392)
T ss_dssp EECC----SSCCHHHHHHHHHHEEEEEEEEEEECC
T ss_pred EECC----CcCHHHHHHHHHHHhCCCCEEEEEecc
Confidence 9764 233467899999999999988887643
No 273
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=97.86 E-value=1.6e-05 Score=78.01 Aligned_cols=98 Identities=16% Similarity=0.112 Sum_probs=64.9
Q ss_pred CceeeccCcCCccccCCC-----------------CCCCeEEEEeCCHHHHHhcCCC---------CcEEEeccCCCCCC
Q 022305 139 SEVFPPSNTPGVSHFPPG-----------------YKQDRIVGMGMNEEELKRNPVL---------TEYVVQDLNLNPKL 192 (299)
Q Consensus 139 ~~vLDiGcG~G~~~~~~~-----------------~~~~~v~gvD~S~~ml~~a~~~---------~~~~~~D~~~~~~l 192 (299)
.+|+|++||+|...+... .....++|+|+++.+++.|+.+ +.+.++|.- ...
T Consensus 246 ~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~i~i~~gDtL--~~~ 323 (544)
T 3khk_A 246 GRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRGIDFNFGKKNADSF--LDD 323 (544)
T ss_dssp EEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTTCCCBCCSSSCCTT--TSC
T ss_pred CeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhCCCcccceeccchh--cCc
Confidence 489999999996322210 0135899999999999877642 222556641 222
Q ss_pred CCCCCCeeEEEec--cccc-c----------------------cC----CHHHHHHHHHhhccCCcEEEEEecCc
Q 022305 193 PFEDNSFDVITNV--VSVD-Y----------------------LT----KPIEVFKEMCQVLKPGGLAIVSFSNR 238 (299)
Q Consensus 193 pf~~~~FD~Vis~--~~l~-~----------------------~~----d~~~~l~ei~rvLkpGG~lii~~~~~ 238 (299)
.+.+..||+|+++ +... + ++ .-..+++.+.+.|||||.+.+.+|+.
T Consensus 324 ~~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~aiVlP~g 398 (544)
T 3khk_A 324 QHPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYHLAPTGSMALLLANG 398 (544)
T ss_dssp SCTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHTEEEEEEEEEEEETH
T ss_pred ccccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHHHhccCceEEEEecch
Confidence 3556889999986 2221 1 11 11258899999999999988887763
No 274
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=97.84 E-value=1.9e-05 Score=69.74 Aligned_cols=57 Identities=14% Similarity=0.116 Sum_probs=44.0
Q ss_pred cCCceeeccCcCCccccCCCCC-CCeEEEEeCCHHHHHhcCCC----CcEEEeccCCCCCCCCCC
Q 022305 137 YYSEVFPPSNTPGVSHFPPGYK-QDRIVGMGMNEEELKRNPVL----TEYVVQDLNLNPKLPFED 196 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~~~~~~~~-~~~v~gvD~S~~ml~~a~~~----~~~~~~D~~~~~~lpf~~ 196 (299)
...+|||+|||+|......... ..+|+|+|+++.|++.++++ ++++++|+ .++++++
T Consensus 31 ~~~~VLDiG~G~G~lt~~L~~~~~~~v~avEid~~~~~~~~~~~~~~v~~i~~D~---~~~~~~~ 92 (249)
T 3ftd_A 31 EGNTVVEVGGGTGNLTKVLLQHPLKKLYVIELDREMVENLKSIGDERLEVINEDA---SKFPFCS 92 (249)
T ss_dssp TTCEEEEEESCHHHHHHHHTTSCCSEEEEECCCHHHHHHHTTSCCTTEEEECSCT---TTCCGGG
T ss_pred CcCEEEEEcCchHHHHHHHHHcCCCeEEEEECCHHHHHHHHhccCCCeEEEEcch---hhCChhH
Confidence 3468999999999743333333 48999999999999987653 67889999 7887765
No 275
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=97.83 E-value=2.3e-06 Score=80.98 Aligned_cols=102 Identities=13% Similarity=0.018 Sum_probs=64.4
Q ss_pred CCceeeccCcCCccccCCCCCCCeEEEEeCCHHHHHhcCC----------CCcEEEeccCCCCCC-CC-CCCCeeEEEec
Q 022305 138 YSEVFPPSNTPGVSHFPPGYKQDRIVGMGMNEEELKRNPV----------LTEYVVQDLNLNPKL-PF-EDNSFDVITNV 205 (299)
Q Consensus 138 ~~~vLDiGcG~G~~~~~~~~~~~~v~gvD~S~~ml~~a~~----------~~~~~~~D~~~~~~l-pf-~~~~FD~Vis~ 205 (299)
..+|||+|||+|...+.....+.+|+|+|+|+.|++.+++ +++++++|+ .+. +. ++++||+|++.
T Consensus 94 g~~VLDLgcG~G~~al~LA~~g~~V~~VD~s~~~l~~Ar~N~~~~~~gl~~i~~i~~Da---~~~L~~~~~~~fDvV~lD 170 (410)
T 3ll7_A 94 GTKVVDLTGGLGIDFIALMSKASQGIYIERNDETAVAARHNIPLLLNEGKDVNILTGDF---KEYLPLIKTFHPDYIYVD 170 (410)
T ss_dssp TCEEEESSCSSSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHSCTTCEEEEEESCG---GGSHHHHHHHCCSEEEEC
T ss_pred CCEEEEeCCCchHHHHHHHhcCCEEEEEECCHHHHHHHHHhHHHhccCCCcEEEEECcH---HHhhhhccCCCceEEEEC
Confidence 4689999999998544444456899999999999986643 367888998 442 32 34689999974
Q ss_pred --------ccccccCCHHHHHHHHHhhccC-CcEEEEEecCcchHH
Q 022305 206 --------VSVDYLTKPIEVFKEMCQVLKP-GGLAIVSFSNRCFWT 242 (299)
Q Consensus 206 --------~~l~~~~d~~~~l~ei~rvLkp-GG~lii~~~~~~~~~ 242 (299)
.-+..+.+..--+.++.+.|+. +..+++..+....+.
T Consensus 171 PPrr~~~~grv~~led~~P~l~~~~~~l~~~~~~~~vK~sP~ld~~ 216 (410)
T 3ll7_A 171 PARRSGADKRVYAIADCEPDLIPLATELLPFCSSILAKLSPMIDLW 216 (410)
T ss_dssp CEEC-----CCCCGGGEESCHHHHHHHHGGGSSEEEEEECTTSCHH
T ss_pred CCCcCCCCceEEehhhcCCCHHHHHHHHHhhCCcEEEEcCCCCChH
Confidence 1222232222233444444433 346666665544444
No 276
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=97.82 E-value=1.6e-05 Score=71.00 Aligned_cols=96 Identities=9% Similarity=-0.050 Sum_probs=61.7
Q ss_pred CCceeeccCcCCc-cc-cCCCCCCCeEEEEeCCHHHHHhcCC------CCcEEEeccCCCCCCCCCCCCeeEEEeccccc
Q 022305 138 YSEVFPPSNTPGV-SH-FPPGYKQDRIVGMGMNEEELKRNPV------LTEYVVQDLNLNPKLPFEDNSFDVITNVVSVD 209 (299)
Q Consensus 138 ~~~vLDiGcG~G~-~~-~~~~~~~~~v~gvD~S~~ml~~a~~------~~~~~~~D~~~~~~lpf~~~~FD~Vis~~~l~ 209 (299)
..+|||+|||+|. .. .....+...|+|+|++..+...+.. .+.....+. +-..++.+.+|+|+|-.+..
T Consensus 91 ~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~pi~~~~~g~~ii~~~~~~---dv~~l~~~~~DvVLSDmApn 167 (282)
T 3gcz_A 91 TGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKPIMRTTLGWNLIRFKDKT---DVFNMEVIPGDTLLCDIGES 167 (282)
T ss_dssp CEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCCCBTTGGGEEEECSC---CGGGSCCCCCSEEEECCCCC
T ss_pred CCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCccccccccccCCCceEEeeCCc---chhhcCCCCcCEEEecCccC
Confidence 3579999999986 22 2223344679999999775443332 122333333 22345678999999987665
Q ss_pred ccCC-----HH--HHHHHHHhhccCC--cEEEEEecC
Q 022305 210 YLTK-----PI--EVFKEMCQVLKPG--GLAIVSFSN 237 (299)
Q Consensus 210 ~~~d-----~~--~~l~ei~rvLkpG--G~lii~~~~ 237 (299)
... .. .+|.-+.++|||| |.|++-+-.
T Consensus 168 -sG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~KvF~ 203 (282)
T 3gcz_A 168 -SPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIKVLC 203 (282)
T ss_dssp -CSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEESC
T ss_pred -CCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEec
Confidence 321 11 3466678999999 999997654
No 277
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=97.81 E-value=4e-05 Score=65.57 Aligned_cols=93 Identities=5% Similarity=-0.097 Sum_probs=63.5
Q ss_pred hcCCceeeccCcCCccccCCCCCCCeEEEEeCCHHHHHhcCC-----------CCcEEEeccCCC------------CCC
Q 022305 136 KYYSEVFPPSNTPGVSHFPPGYKQDRIVGMGMNEEELKRNPV-----------LTEYVVQDLNLN------------PKL 192 (299)
Q Consensus 136 ~~~~~vLDiGcG~G~~~~~~~~~~~~v~gvD~S~~ml~~a~~-----------~~~~~~~D~~~~------------~~l 192 (299)
....+||++|||-.+..++.. ++++|+.+|.+++..+.+++ +++++.+|+... +.+
T Consensus 29 ~~a~~VLEiGtGySTl~lA~~-~~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~~~wg~p~~~~~~~~l 107 (202)
T 3cvo_A 29 EEAEVILEYGSGGSTVVAAEL-PGKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGPTGDWGHPVSDAKWRSY 107 (202)
T ss_dssp HHCSEEEEESCSHHHHHHHTS-TTCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSSBCGGGCBSSSTTGGGT
T ss_pred hCCCEEEEECchHHHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchhhhcccccccchhhhhH
Confidence 345799999997333333332 37999999999999876543 367888886210 002
Q ss_pred C--------C-CCCCeeEEEecccccccCCHHHHHHHHHhhccCCcEEEEE
Q 022305 193 P--------F-EDNSFDVITNVVSVDYLTKPIEVFKEMCQVLKPGGLAIVS 234 (299)
Q Consensus 193 p--------f-~~~~FD~Vis~~~l~~~~d~~~~l~ei~rvLkpGG~lii~ 234 (299)
+ . ..++||+|+.-.- .....+..+.+.|+|||.++++
T Consensus 108 ~~~~~~i~~~~~~~~fDlIfIDg~-----k~~~~~~~~l~~l~~GG~Iv~D 153 (202)
T 3cvo_A 108 PDYPLAVWRTEGFRHPDVVLVDGR-----FRVGCALATAFSITRPVTLLFD 153 (202)
T ss_dssp THHHHGGGGCTTCCCCSEEEECSS-----SHHHHHHHHHHHCSSCEEEEET
T ss_pred HHHhhhhhccccCCCCCEEEEeCC-----CchhHHHHHHHhcCCCeEEEEe
Confidence 2 1 2378999997752 2346777788999999999775
No 278
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=97.77 E-value=3.6e-06 Score=75.65 Aligned_cols=57 Identities=12% Similarity=0.060 Sum_probs=43.0
Q ss_pred cCCceeeccCcCCccccCCCCCCCe----EEEEeCCHHHHHhcCC----CCcEEEeccCCCCCCCCCC
Q 022305 137 YYSEVFPPSNTPGVSHFPPGYKQDR----IVGMGMNEEELKRNPV----LTEYVVQDLNLNPKLPFED 196 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~~~~~~~~~~~----v~gvD~S~~ml~~a~~----~~~~~~~D~~~~~~lpf~~ 196 (299)
...+|||+|||+|...........+ |+|+|+++.|++.+++ +++++++|+ .++++++
T Consensus 42 ~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~~~~v~~i~~D~---~~~~~~~ 106 (279)
T 3uzu_A 42 RGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRFGELLELHAGDA---LTFDFGS 106 (279)
T ss_dssp TTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHHGGGEEEEESCG---GGCCGGG
T ss_pred CcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhcCCCcEEEECCh---hcCChhH
Confidence 4568999999999744433322344 9999999999998764 478999999 7777653
No 279
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=97.76 E-value=3.8e-06 Score=76.34 Aligned_cols=76 Identities=13% Similarity=0.065 Sum_probs=54.2
Q ss_pred HHHHHHhh-hcCCceeeccCcCCcc--ccCCCCCCCeEEEEeCCHHHHHhcCC-------CCcEEEeccCCCCCCC--CC
Q 022305 128 DPAIAALT-KYYSEVFPPSNTPGVS--HFPPGYKQDRIVGMGMNEEELKRNPV-------LTEYVVQDLNLNPKLP--FE 195 (299)
Q Consensus 128 ~~~~~~l~-~~~~~vLDiGcG~G~~--~~~~~~~~~~v~gvD~S~~ml~~a~~-------~~~~~~~D~~~~~~lp--f~ 195 (299)
+.+++.+. +...+|||+|||+|.. .+....++.+|+|+|+|+.|++.|++ +++++++|+ ..++ +.
T Consensus 16 ~e~l~~L~~~~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~g~~v~~v~~d~---~~l~~~l~ 92 (301)
T 1m6y_A 16 REVIEFLKPEDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSY---READFLLK 92 (301)
T ss_dssp HHHHHHHCCCTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCG---GGHHHHHH
T ss_pred HHHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCH---HHHHHHHH
Confidence 44556553 3456899999999962 23333346899999999999987654 477899998 6664 22
Q ss_pred ---CCCeeEEEecc
Q 022305 196 ---DNSFDVITNVV 206 (299)
Q Consensus 196 ---~~~FD~Vis~~ 206 (299)
.++||.|++..
T Consensus 93 ~~g~~~~D~Vl~D~ 106 (301)
T 1m6y_A 93 TLGIEKVDGILMDL 106 (301)
T ss_dssp HTTCSCEEEEEEEC
T ss_pred hcCCCCCCEEEEcC
Confidence 25799999753
No 280
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=97.71 E-value=5.5e-06 Score=73.37 Aligned_cols=65 Identities=8% Similarity=-0.045 Sum_probs=47.7
Q ss_pred cCCceeeccCcCCccccCCCCCCCe--EEEEeCCHHHHHhcCC------CCcEEEeccCCCCCCCCCC-----CCeeEEE
Q 022305 137 YYSEVFPPSNTPGVSHFPPGYKQDR--IVGMGMNEEELKRNPV------LTEYVVQDLNLNPKLPFED-----NSFDVIT 203 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~~~~~~~~~~~--v~gvD~S~~ml~~a~~------~~~~~~~D~~~~~~lpf~~-----~~FD~Vi 203 (299)
...+|||+|||+|.... .. ...+ |+|+|+++.|++.+++ +++++++|+ ..+++++ +..|.|+
T Consensus 21 ~~~~VLEIG~G~G~lt~-l~-~~~~~~v~avEid~~~~~~a~~~~~~~~~v~~i~~D~---~~~~~~~~~~~~~~~~~vv 95 (252)
T 1qyr_A 21 KGQAMVEIGPGLAALTE-PV-GERLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDA---MTFNFGELAEKMGQPLRVF 95 (252)
T ss_dssp TTCCEEEECCTTTTTHH-HH-HTTCSCEEEECCCHHHHHHHHTCTTTGGGEEEECSCG---GGCCHHHHHHHHTSCEEEE
T ss_pred CcCEEEEECCCCcHHHH-hh-hCCCCeEEEEECCHHHHHHHHHHhccCCceEEEECch---hhCCHHHhhcccCCceEEE
Confidence 34689999999997544 32 2456 9999999999997765 367889998 6776543 2346777
Q ss_pred ecc
Q 022305 204 NVV 206 (299)
Q Consensus 204 s~~ 206 (299)
++.
T Consensus 96 sNl 98 (252)
T 1qyr_A 96 GNL 98 (252)
T ss_dssp EEC
T ss_pred ECC
Confidence 764
No 281
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=97.63 E-value=4.8e-06 Score=74.03 Aligned_cols=87 Identities=13% Similarity=-0.028 Sum_probs=56.6
Q ss_pred CceeeccCcCCccccCCCCCCCeEEEEeCCHHH-------HHhcC----------CCCcEEEeccCCCCC-CCCCCCCee
Q 022305 139 SEVFPPSNTPGVSHFPPGYKQDRIVGMGMNEEE-------LKRNP----------VLTEYVVQDLNLNPK-LPFEDNSFD 200 (299)
Q Consensus 139 ~~vLDiGcG~G~~~~~~~~~~~~v~gvD~S~~m-------l~~a~----------~~~~~~~~D~~~~~~-lpf~~~~FD 200 (299)
.+|||++||.|...+.....+++|+++|+++.+ ++.++ .+++++++|. .+ ++...++||
T Consensus 90 ~~VLDl~~G~G~dal~lA~~g~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~---~~~L~~~~~~fD 166 (258)
T 2oyr_A 90 PDVVDATAGLGRDAFVLASVGCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASS---LTALTDITPRPQ 166 (258)
T ss_dssp CCEEETTCTTCHHHHHHHHHTCCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCH---HHHSTTCSSCCS
T ss_pred CEEEEcCCcCCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCH---HHHHHhCcccCC
Confidence 689999999998555433346789999999975 43332 2477899987 33 332223699
Q ss_pred EEEecccccccCCHHHHHHHHHhhccCCc
Q 022305 201 VITNVVSVDYLTKPIEVFKEMCQVLKPGG 229 (299)
Q Consensus 201 ~Vis~~~l~~~~d~~~~l~ei~rvLkpGG 229 (299)
+|++.-.+.+- .....+++..++|++.+
T Consensus 167 vV~lDP~y~~~-~~saavkk~~~~lr~l~ 194 (258)
T 2oyr_A 167 VVYLDPMFPHK-QKSALVKKEMRVFQSLV 194 (258)
T ss_dssp EEEECCCCCCC-CC-----HHHHHHHHHS
T ss_pred EEEEcCCCCCc-ccchHHHHHHHHHHHhh
Confidence 99998666553 23355666777777655
No 282
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=97.63 E-value=0.00018 Score=72.97 Aligned_cols=98 Identities=10% Similarity=0.074 Sum_probs=62.8
Q ss_pred CCceeeccCcCCccccCC--CC---CCCeEEEEeCCHHHHHhc--CC---------C---CcEEEeccCCCCCC-CCCCC
Q 022305 138 YSEVFPPSNTPGVSHFPP--GY---KQDRIVGMGMNEEELKRN--PV---------L---TEYVVQDLNLNPKL-PFEDN 197 (299)
Q Consensus 138 ~~~vLDiGcG~G~~~~~~--~~---~~~~v~gvD~S~~ml~~a--~~---------~---~~~~~~D~~~~~~l-pf~~~ 197 (299)
..+|||+|||+|...+.. .. ...+++|+|+++.+++.| +. . ..+...|. ... +...+
T Consensus 322 g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~---L~~~~~~~~ 398 (878)
T 3s1s_A 322 DEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDV---CSLNPEDFA 398 (878)
T ss_dssp TCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCG---GGCCGGGGT
T ss_pred CCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecch---hcccccccC
Confidence 458999999999733221 11 236899999999998877 21 1 12333343 221 23457
Q ss_pred CeeEEEecccc--cccC--------------------------C-HHHHHHHHHhhccCCcEEEEEecCc
Q 022305 198 SFDVITNVVSV--DYLT--------------------------K-PIEVFKEMCQVLKPGGLAIVSFSNR 238 (299)
Q Consensus 198 ~FD~Vis~~~l--~~~~--------------------------d-~~~~l~ei~rvLkpGG~lii~~~~~ 238 (299)
.||+|+++==. ..-. + ...+++.+.+.|||||.+.+.+|+.
T Consensus 399 kFDVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAfIlP~s 468 (878)
T 3s1s_A 399 NVSVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISAIMPKQ 468 (878)
T ss_dssp TEEEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEEEEETH
T ss_pred CCCEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEEEEEChH
Confidence 89999987211 1000 1 2346788999999999999888863
No 283
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=97.62 E-value=2.9e-05 Score=77.16 Aligned_cols=87 Identities=11% Similarity=0.119 Sum_probs=59.6
Q ss_pred ceeeccCcCCcc---cc-CCCC--CCCeEEEEeCCHHHHHhcCC---------CCcEEEeccCCCCCCCCCCCCeeEEEe
Q 022305 140 EVFPPSNTPGVS---HF-PPGY--KQDRIVGMGMNEEELKRNPV---------LTEYVVQDLNLNPKLPFEDNSFDVITN 204 (299)
Q Consensus 140 ~vLDiGcG~G~~---~~-~~~~--~~~~v~gvD~S~~ml~~a~~---------~~~~~~~D~~~~~~lpf~~~~FD~Vis 204 (299)
.|||+|||+|.. .+ +.+. ...+|++||-|+.+. .+.+ +++++.+|+ +++..+ +++|+|||
T Consensus 360 vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp~A~-~a~~~v~~N~~~dkVtVI~gd~---eev~LP-EKVDIIVS 434 (637)
T 4gqb_A 360 VLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNPNAV-VTLENWQFEEWGSQVTVVSSDM---REWVAP-EKADIIVS 434 (637)
T ss_dssp EEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCHHHH-HHHHHHHHHTTGGGEEEEESCT---TTCCCS-SCEEEEEC
T ss_pred EEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCHHHH-HHHHHHHhccCCCeEEEEeCcc---eeccCC-cccCEEEE
Confidence 599999999952 11 1111 123789999998543 3322 389999999 777665 56999997
Q ss_pred ccccccc--CCHHHHHHHHHhhccCCcEE
Q 022305 205 VVSVDYL--TKPIEVFKEMCQVLKPGGLA 231 (299)
Q Consensus 205 ~~~l~~~--~d~~~~l~ei~rvLkpGG~l 231 (299)
=..=..+ +....++....|.|||||.+
T Consensus 435 EwMG~fLl~E~mlevL~Ardr~LKPgGim 463 (637)
T 4gqb_A 435 ELLGSFADNELSPECLDGAQHFLKDDGVS 463 (637)
T ss_dssp CCCBTTBGGGCHHHHHHHHGGGEEEEEEE
T ss_pred EcCcccccccCCHHHHHHHHHhcCCCcEE
Confidence 5322111 23457888889999999976
No 284
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=97.61 E-value=4e-05 Score=71.25 Aligned_cols=99 Identities=13% Similarity=0.115 Sum_probs=65.1
Q ss_pred hcCCceeeccCcCCc--cccCCCCCCCeEEEEeCCHHHHHhcCC--------------CCcEEEeccCCCCCCC-CCCCC
Q 022305 136 KYYSEVFPPSNTPGV--SHFPPGYKQDRIVGMGMNEEELKRNPV--------------LTEYVVQDLNLNPKLP-FEDNS 198 (299)
Q Consensus 136 ~~~~~vLDiGcG~G~--~~~~~~~~~~~v~gvD~S~~ml~~a~~--------------~~~~~~~D~~~~~~lp-f~~~~ 198 (299)
+...+|||+++|+|. .+++.......|+++|+|+.=++..++ ++.....|. ..++ ...+.
T Consensus 147 ~pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~---~~~~~~~~~~ 223 (359)
T 4fzv_A 147 QPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDG---RKWGELEGDT 223 (359)
T ss_dssp CTTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCG---GGHHHHSTTC
T ss_pred CCCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCch---hhcchhcccc
Confidence 445689999999995 444444455689999999876653321 245566676 4443 45678
Q ss_pred eeEEE----eccc----ccccCC----------------HHHHHHHHHhhccCCcEEEEEecC
Q 022305 199 FDVIT----NVVS----VDYLTK----------------PIEVFKEMCQVLKPGGLAIVSFSN 237 (299)
Q Consensus 199 FD~Vi----s~~~----l~~~~d----------------~~~~l~ei~rvLkpGG~lii~~~~ 237 (299)
||.|+ |+.. +..-++ -.++|....+.|||||.++-++-.
T Consensus 224 fD~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTCS 286 (359)
T 4fzv_A 224 YDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCS 286 (359)
T ss_dssp EEEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEESC
T ss_pred CCEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeCC
Confidence 99999 4431 111111 136788899999999988877544
No 285
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=97.46 E-value=0.00041 Score=62.33 Aligned_cols=98 Identities=8% Similarity=-0.005 Sum_probs=59.9
Q ss_pred hcCCceeeccCcCCc--cccCCCCCCCeEEEEeCCHHHHHhcCC------CCcEEEeccCCCCCCCCCCCCeeEEEeccc
Q 022305 136 KYYSEVFPPSNTPGV--SHFPPGYKQDRIVGMGMNEEELKRNPV------LTEYVVQDLNLNPKLPFEDNSFDVITNVVS 207 (299)
Q Consensus 136 ~~~~~vLDiGcG~G~--~~~~~~~~~~~v~gvD~S~~ml~~a~~------~~~~~~~D~~~~~~lpf~~~~FD~Vis~~~ 207 (299)
+...++||+||++|. ..+....+...|+|+|+...+...... .+.....+. +-..+..+.+|+|+|-.+
T Consensus 80 ~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~~~P~~~~~~~~~iv~~~~~~---di~~l~~~~~DlVlsD~A 156 (300)
T 3eld_A 80 RITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHEKPIHMQTLGWNIVKFKDKS---NVFTMPTEPSDTLLCDIG 156 (300)
T ss_dssp CCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCCCBTTGGGEEEECSC---CTTTSCCCCCSEEEECCC
T ss_pred CCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEeccccccccccccccCCceEEeecCc---eeeecCCCCcCEEeecCc
Confidence 344689999999885 222222234578999998654322211 122222222 223455678999999765
Q ss_pred ccccCCH-------HHHHHHHHhhccCC-cEEEEEecC
Q 022305 208 VDYLTKP-------IEVFKEMCQVLKPG-GLAIVSFSN 237 (299)
Q Consensus 208 l~~~~d~-------~~~l~ei~rvLkpG-G~lii~~~~ 237 (299)
.. .... ...|.-+.++|||| |.|++-+-.
T Consensus 157 Pn-sG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~KvF~ 193 (300)
T 3eld_A 157 ES-SSNPLVERDRTMKVLENFERWKHVNTENFCVKVLA 193 (300)
T ss_dssp CC-CSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEEESS
T ss_pred CC-CCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEEecc
Confidence 55 3221 23466678999999 999997544
No 286
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=97.32 E-value=5.8e-05 Score=66.96 Aligned_cols=93 Identities=14% Similarity=0.140 Sum_probs=59.4
Q ss_pred CceeeccCcCCccccCC--C-------CC-----CCeEEEEeCCH---HHHHhc-----------C--------------
Q 022305 139 SEVFPPSNTPGVSHFPP--G-------YK-----QDRIVGMGMNE---EELKRN-----------P-------------- 176 (299)
Q Consensus 139 ~~vLDiGcG~G~~~~~~--~-------~~-----~~~v~gvD~S~---~ml~~a-----------~-------------- 176 (299)
.+|||+|+|+|...+.. . .+ ..+++++|..| ++++++ +
T Consensus 62 ~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~g~~ 141 (257)
T 2qy6_A 62 FVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPGCH 141 (257)
T ss_dssp EEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCSEEE
T ss_pred CEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccccchh
Confidence 47999999999743321 0 23 25899999776 544422 1
Q ss_pred --------CCCcEEEeccCCCCCCCCCC----CCeeEEEec-ccccccCC--HHHHHHHHHhhccCCcEEEE
Q 022305 177 --------VLTEYVVQDLNLNPKLPFED----NSFDVITNV-VSVDYLTK--PIEVFKEMCQVLKPGGLAIV 233 (299)
Q Consensus 177 --------~~~~~~~~D~~~~~~lpf~~----~~FD~Vis~-~~l~~~~d--~~~~l~ei~rvLkpGG~lii 233 (299)
.+++++.+|+. +.++..+ ..||+|+.- ++-...++ -..+|+++.++|||||.++.
T Consensus 142 r~~~~~~~~~l~l~~GDa~--~~l~~~~~~~~~~~D~iflD~fsp~~~p~lw~~~~l~~l~~~L~pGG~l~t 211 (257)
T 2qy6_A 142 RLLLDEGRVTLDLWFGDIN--ELISQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLAT 211 (257)
T ss_dssp EEEEC--CEEEEEEESCHH--HHGGGSCGGGTTCEEEEEECSSCTTTCGGGCCHHHHHHHHHHEEEEEEEEE
T ss_pred heeccCCceEEEEEECcHH--HHHhhcccccCCeEEEEEECCCCcccChhhcCHHHHHHHHHHcCCCcEEEE
Confidence 12456777872 2244322 279999974 33222233 26799999999999998774
No 287
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=97.30 E-value=2.2e-05 Score=78.39 Aligned_cols=90 Identities=13% Similarity=0.106 Sum_probs=62.3
Q ss_pred ceeeccCcCCccc---c-CCC-----------CCCCeEEEEeCCHHHHHhcC--------CCCcEEEeccCCCCCCCCC-
Q 022305 140 EVFPPSNTPGVSH---F-PPG-----------YKQDRIVGMGMNEEELKRNP--------VLTEYVVQDLNLNPKLPFE- 195 (299)
Q Consensus 140 ~vLDiGcG~G~~~---~-~~~-----------~~~~~v~gvD~S~~ml~~a~--------~~~~~~~~D~~~~~~lpf~- 195 (299)
.|||+|||+|... + +.. ....+|++||-|+.++...+ .+++++.+|+ +++..+
T Consensus 412 VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~Ng~~d~VtVI~gd~---eev~lp~ 488 (745)
T 3ua3_A 412 VIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNVRTWKRRVTIIESDM---RSLPGIA 488 (745)
T ss_dssp EEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHHHTTTTCSEEEESCG---GGHHHHH
T ss_pred EEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHhcCCCCeEEEEeCch---hhccccc
Confidence 5999999999631 1 111 12249999999986553211 2499999999 777663
Q ss_pred ----CCCeeEEEeccccccc--CCHHHHHHHHHhhccCCcEEE
Q 022305 196 ----DNSFDVITNVVSVDYL--TKPIEVFKEMCQVLKPGGLAI 232 (299)
Q Consensus 196 ----~~~FD~Vis~~~l~~~--~d~~~~l~ei~rvLkpGG~li 232 (299)
.++.|+|||-..-... +-..+.|..+.|.|||||.+|
T Consensus 489 ~~~~~ekVDIIVSElmGsfl~nEL~pe~Ld~v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 489 KDRGFEQPDIIVSELLGSFGDNELSPECLDGVTGFLKPTTISI 531 (745)
T ss_dssp HHTTCCCCSEEEECCCBTTBGGGSHHHHHHTTGGGSCTTCEEE
T ss_pred ccCCCCcccEEEEeccccccchhccHHHHHHHHHhCCCCcEEE
Confidence 5789999987643222 123568888899999999753
No 288
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=97.27 E-value=0.0021 Score=59.63 Aligned_cols=85 Identities=13% Similarity=0.032 Sum_probs=59.9
Q ss_pred hcCCceeeccCcCCccccCCCCCCCeEEEEeCCHHHHH--hcCCCCcEEEeccCCCCCCCCCCCCeeEEEecccccccCC
Q 022305 136 KYYSEVFPPSNTPGVSHFPPGYKQDRIVGMGMNEEELK--RNPVLTEYVVQDLNLNPKLPFEDNSFDVITNVVSVDYLTK 213 (299)
Q Consensus 136 ~~~~~vLDiGcG~G~~~~~~~~~~~~v~gvD~S~~ml~--~a~~~~~~~~~D~~~~~~lpf~~~~FD~Vis~~~l~~~~d 213 (299)
+...++||+||++|.-.......+.+|+|||+.+ |-. ....+++++.+|. ..+..+.+.||+|+|-.+ .+
T Consensus 210 ~~G~~vlDLGAaPGGWT~~l~~rg~~V~aVD~~~-l~~~l~~~~~V~~~~~d~---~~~~~~~~~~D~vvsDm~----~~ 281 (375)
T 4auk_A 210 ANGMWAVDLGACPGGWTYQLVKRNMWVYSVDNGP-MAQSLMDTGQVTWLREDG---FKFRPTRSNISWMVCDMV----EK 281 (375)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTCEEEEECSSC-CCHHHHTTTCEEEECSCT---TTCCCCSSCEEEEEECCS----SC
T ss_pred CCCCEEEEeCcCCCHHHHHHHHCCCEEEEEEhhh-cChhhccCCCeEEEeCcc---ccccCCCCCcCEEEEcCC----CC
Confidence 3457899999998862222223478999999874 211 2234588999998 666666788999999654 46
Q ss_pred HHHHHHHHHhhccCC
Q 022305 214 PIEVFKEMCQVLKPG 228 (299)
Q Consensus 214 ~~~~l~ei~rvLkpG 228 (299)
+..+++-+.+.|..|
T Consensus 282 p~~~~~l~~~wl~~~ 296 (375)
T 4auk_A 282 PAKVAALMAQWLVNG 296 (375)
T ss_dssp HHHHHHHHHHHHHTT
T ss_pred hHHhHHHHHHHHhcc
Confidence 777777777777766
No 289
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=97.14 E-value=5.3e-05 Score=61.28 Aligned_cols=80 Identities=11% Similarity=0.110 Sum_probs=54.4
Q ss_pred CceeeccCcCCc--cccCCCCCCCeEEEEeCCHHHHHhcCCCCcEEEeccCCCCCCCCCC--CCeeEEEecccccccCCH
Q 022305 139 SEVFPPSNTPGV--SHFPPGYKQDRIVGMGMNEEELKRNPVLTEYVVQDLNLNPKLPFED--NSFDVITNVVSVDYLTKP 214 (299)
Q Consensus 139 ~~vLDiGcG~G~--~~~~~~~~~~~v~gvD~S~~ml~~a~~~~~~~~~D~~~~~~lpf~~--~~FD~Vis~~~l~~~~d~ 214 (299)
.++||+|||.|. ........+.+|+++|+|+..++ +++.|+ .+ |..+ ..||+|.+..- -+++
T Consensus 37 ~rVlEVG~G~g~~vA~~La~~~g~~V~atDInp~Av~-------~v~dDi---F~-P~~~~Y~~~DLIYsirP---P~El 102 (153)
T 2k4m_A 37 TRVVEVGAGRFLYVSDYIRKHSKVDLVLTDIKPSHGG-------IVRDDI---TS-PRMEIYRGAALIYSIRP---PAEI 102 (153)
T ss_dssp SEEEEETCTTCCHHHHHHHHHSCCEEEEECSSCSSTT-------EECCCS---SS-CCHHHHTTEEEEEEESC---CTTT
T ss_pred CcEEEEccCCChHHHHHHHHhCCCeEEEEECCccccc-------eEEccC---CC-CcccccCCcCEEEEcCC---CHHH
Confidence 599999999994 22332225789999999998766 788888 33 3222 47999987652 2356
Q ss_pred HHHHHHHHhhccCCcEEEEE
Q 022305 215 IEVFKEMCQVLKPGGLAIVS 234 (299)
Q Consensus 215 ~~~l~ei~rvLkpGG~lii~ 234 (299)
...+.++.+.+ |.-++|.
T Consensus 103 ~~~i~~lA~~v--~adliI~ 120 (153)
T 2k4m_A 103 HSSLMRVADAV--GARLIIK 120 (153)
T ss_dssp HHHHHHHHHHH--TCEEEEE
T ss_pred HHHHHHHHHHc--CCCEEEE
Confidence 66666666544 3566664
No 290
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=96.83 E-value=0.00059 Score=77.58 Aligned_cols=94 Identities=16% Similarity=0.104 Sum_probs=46.1
Q ss_pred CceeeccCcCCccccC-----CCCC--CCeEEEEeCCHHHHHhcCCCCc---EEE--eccCCCCC-CCCCCCCeeEEEec
Q 022305 139 SEVFPPSNTPGVSHFP-----PGYK--QDRIVGMGMNEEELKRNPVLTE---YVV--QDLNLNPK-LPFEDNSFDVITNV 205 (299)
Q Consensus 139 ~~vLDiGcG~G~~~~~-----~~~~--~~~v~gvD~S~~ml~~a~~~~~---~~~--~D~~~~~~-lpf~~~~FD~Vis~ 205 (299)
.+||++|.|+|..... ...+ ..+++..|+|+...+.++++.. ... .|. .. .++..++||+|++.
T Consensus 1242 ~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~di~~~~~d~---~~~~~~~~~~ydlvia~ 1318 (2512)
T 2vz8_A 1242 MKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQLHVTQGQWDP---ANPAPGSLGKADLLVCN 1318 (2512)
T ss_dssp EEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHHTEEEECCCS---SCCCC-----CCEEEEE
T ss_pred ceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhcccccccccc---cccccCCCCceeEEEEc
Confidence 5899999998852211 0111 2478999999998888887521 212 133 22 24566789999999
Q ss_pred ccccccCCHHHHHHHHHhhccCCcEEEEEe
Q 022305 206 VSVDYLTKPIEVFKEMCQVLKPGGLAIVSF 235 (299)
Q Consensus 206 ~~l~~~~d~~~~l~ei~rvLkpGG~lii~~ 235 (299)
+++|-.++....|+++.++|||||++++..
T Consensus 1319 ~vl~~t~~~~~~l~~~~~lL~p~G~l~~~e 1348 (2512)
T 2vz8_A 1319 CALATLGDPAVAVGNMAATLKEGGFLLLHT 1348 (2512)
T ss_dssp CC--------------------CCEEEEEE
T ss_pred ccccccccHHHHHHHHHHhcCCCcEEEEEe
Confidence 999888899999999999999999887754
No 291
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=96.74 E-value=0.0013 Score=61.21 Aligned_cols=95 Identities=14% Similarity=0.073 Sum_probs=63.4
Q ss_pred CCceeeccCcCCc-cccCCCCCCCeEEEEeCCHHHHHhcCCC----------------CcEEEeccCCCCCC----CCCC
Q 022305 138 YSEVFPPSNTPGV-SHFPPGYKQDRIVGMGMNEEELKRNPVL----------------TEYVVQDLNLNPKL----PFED 196 (299)
Q Consensus 138 ~~~vLDiGcG~G~-~~~~~~~~~~~v~gvD~S~~ml~~a~~~----------------~~~~~~D~~~~~~l----pf~~ 196 (299)
..+||=+|.|.|. .....+++..+|+.|||++.+++.+++. ++.+.+|. ... .-..
T Consensus 206 pkrVLIIGgGdG~~~revlkh~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da---~~fl~~~~~~~ 282 (381)
T 3c6k_A 206 GKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDC---IPVLKRYAKEG 282 (381)
T ss_dssp TCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCH---HHHHHHHHHHT
T ss_pred CCeEEEECCCcHHHHHHHHhcCCceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHH---HHHHHhhhhcc
Confidence 4689999999775 2222334557999999999999977642 34556665 211 1134
Q ss_pred CCeeEEEeccccccc-CC---------HHHHHHHHHhhccCCcEEEEEe
Q 022305 197 NSFDVITNVVSVDYL-TK---------PIEVFKEMCQVLKPGGLAIVSF 235 (299)
Q Consensus 197 ~~FD~Vis~~~l~~~-~d---------~~~~l~ei~rvLkpGG~lii~~ 235 (299)
+.||+|+.-..-... .+ -.++++.++++|+|||.++...
T Consensus 283 ~~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q~ 331 (381)
T 3c6k_A 283 REFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQG 331 (381)
T ss_dssp CCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CceeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEec
Confidence 679999965321111 11 1467889999999999988753
No 292
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=96.47 E-value=0.0047 Score=55.43 Aligned_cols=96 Identities=10% Similarity=0.006 Sum_probs=64.1
Q ss_pred cCCceeeccCcCCc-cc-cCCCCCCCeEEEEeCCHHHHH-------hcCCCCcEEEe-ccCCCCCCCCCCCCeeEEEecc
Q 022305 137 YYSEVFPPSNTPGV-SH-FPPGYKQDRIVGMGMNEEELK-------RNPVLTEYVVQ-DLNLNPKLPFEDNSFDVITNVV 206 (299)
Q Consensus 137 ~~~~vLDiGcG~G~-~~-~~~~~~~~~v~gvD~S~~ml~-------~a~~~~~~~~~-D~~~~~~lpf~~~~FD~Vis~~ 206 (299)
....|||+||++|. .. .........|+|+|+-..--+ ..-..+.++.+ |+ ..++- ..+|+|+|-.
T Consensus 94 ~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~he~P~~~~ql~w~lV~~~~~~Dv---~~l~~--~~~D~ivcDi 168 (321)
T 3lkz_A 94 PVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGHEEPQLVQSYGWNIVTMKSGVDV---FYRPS--ECCDTLLCDI 168 (321)
T ss_dssp CCEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTSCCCCCCCBTTGGGEEEECSCCT---TSSCC--CCCSEEEECC
T ss_pred CCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCccCcchhhhcCCcceEEEeccCH---hhCCC--CCCCEEEEEC
Confidence 34589999999886 22 333333357999999876111 11123677776 76 55543 6699999976
Q ss_pred cccccCCHH-------HHHHHHHhhccCC-cEEEEEecCc
Q 022305 207 SVDYLTKPI-------EVFKEMCQVLKPG-GLAIVSFSNR 238 (299)
Q Consensus 207 ~l~~~~d~~-------~~l~ei~rvLkpG-G~lii~~~~~ 238 (299)
. +--+++. ++|+-+.+.|++| |-|++-+-.+
T Consensus 169 g-eSs~~~~ve~~Rtl~vLel~~~wL~~~~~~f~~KVl~p 207 (321)
T 3lkz_A 169 G-ESSSSAEVEEHRTIRVLEMVEDWLHRGPREFCVKVLCP 207 (321)
T ss_dssp C-CCCSCHHHHHHHHHHHHHHHHHHHTTCCCEEEEEESCT
T ss_pred c-cCCCChhhhhhHHHHHHHHHHHHhccCCCcEEEEEcCC
Confidence 6 5555442 3666668889999 8888887665
No 293
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=96.46 E-value=0.0014 Score=58.81 Aligned_cols=95 Identities=8% Similarity=0.023 Sum_probs=64.9
Q ss_pred cCCceeeccCcCCccccCC--C-----CCCCeEEEEeCCHHH--------------------------HH-------hc-
Q 022305 137 YYSEVFPPSNTPGVSHFPP--G-----YKQDRIVGMGMNEEE--------------------------LK-------RN- 175 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~~~~~--~-----~~~~~v~gvD~S~~m--------------------------l~-------~a- 175 (299)
....||++|+..|.+.+.. . .++.+|+++|..+.+ ++ .+
T Consensus 106 ~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~g 185 (282)
T 2wk1_A 106 VPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNYD 185 (282)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHTT
T ss_pred CCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHcC
Confidence 4678999999988744321 1 136789999964321 11 11
Q ss_pred --CCCCcEEEeccCCCCCCC-CCCCCeeEEEecccccccCCHHHHHHHHHhhccCCcEEEEEe
Q 022305 176 --PVLTEYVVQDLNLNPKLP-FEDNSFDVITNVVSVDYLTKPIEVFKEMCQVLKPGGLAIVSF 235 (299)
Q Consensus 176 --~~~~~~~~~D~~~~~~lp-f~~~~FD~Vis~~~l~~~~d~~~~l~ei~rvLkpGG~lii~~ 235 (299)
.++++++.+|+. +.+| +++++||+|+.-.- +.......|+.+.+.|+|||+++++.
T Consensus 186 l~~~~I~li~Gda~--etL~~~~~~~~d~vfIDaD--~y~~~~~~Le~~~p~L~pGGiIv~DD 244 (282)
T 2wk1_A 186 LLDEQVRFLPGWFK--DTLPTAPIDTLAVLRMDGD--LYESTWDTLTNLYPKVSVGGYVIVDD 244 (282)
T ss_dssp CCSTTEEEEESCHH--HHSTTCCCCCEEEEEECCC--SHHHHHHHHHHHGGGEEEEEEEEESS
T ss_pred CCcCceEEEEeCHH--HHHhhCCCCCEEEEEEcCC--ccccHHHHHHHHHhhcCCCEEEEEcC
Confidence 245889999884 4455 44678999997642 22234578999999999999999864
No 294
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=96.44 E-value=0.00046 Score=62.17 Aligned_cols=51 Identities=10% Similarity=0.068 Sum_probs=39.4
Q ss_pred HHHHHHhhhcCCceeeccCcCCccccCCCCCCCeEEEEeCCHHHHHhcCCC
Q 022305 128 DPAIAALTKYYSEVFPPSNTPGVSHFPPGYKQDRIVGMGMNEEELKRNPVL 178 (299)
Q Consensus 128 ~~~~~~l~~~~~~vLDiGcG~G~~~~~~~~~~~~v~gvD~S~~ml~~a~~~ 178 (299)
..++.........|||++||+|+..+.....+.+++|+|+++.+++.++++
T Consensus 226 ~~~i~~~~~~~~~vlD~f~GsGt~~~~a~~~g~~~~g~e~~~~~~~~a~~r 276 (297)
T 2zig_A 226 ERLVRMFSFVGDVVLDPFAGTGTTLIAAARWGRRALGVELVPRYAQLAKER 276 (297)
T ss_dssp HHHHHHHCCTTCEEEETTCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHH
T ss_pred HHHHHHhCCCCCEEEECCCCCCHHHHHHHHcCCeEEEEeCCHHHHHHHHHH
Confidence 334444445567899999999986666655678999999999999987754
No 295
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=96.20 E-value=0.0037 Score=56.13 Aligned_cols=90 Identities=16% Similarity=0.098 Sum_probs=56.8
Q ss_pred CCceeeccCc------CCccccCCCCCC-CeEEEEeCCHHHHHhcCCCCcEEEeccCCCCCCCCCCCCeeEEEecccc--
Q 022305 138 YSEVFPPSNT------PGVSHFPPGYKQ-DRIVGMGMNEEELKRNPVLTEYVVQDLNLNPKLPFEDNSFDVITNVVSV-- 208 (299)
Q Consensus 138 ~~~vLDiGcG------~G~~~~~~~~~~-~~v~gvD~S~~ml~~a~~~~~~~~~D~~~~~~lpf~~~~FD~Vis~~~l-- 208 (299)
..+|||+|+| +|...+....+. +.|+++|+.+-.. ....++++|. ..+.. ...||+|+|-..-
T Consensus 110 gmrVLDLGA~s~kg~APGS~VLr~~~p~g~~VVavDL~~~~s----da~~~IqGD~---~~~~~-~~k~DLVISDMAPNt 181 (344)
T 3r24_A 110 NMRVIHFGAGSDKGVAPGTAVLRQWLPTGTLLVDSDLNDFVS----DADSTLIGDC---ATVHT-ANKWDLIISDMYDPR 181 (344)
T ss_dssp TCEEEEESCCCTTSBCHHHHHHHHHSCTTCEEEEEESSCCBC----SSSEEEESCG---GGEEE-SSCEEEEEECCCCTT
T ss_pred CCEEEeCCCCCCCCCCCcHHHHHHhCCCCcEEEEeeCccccc----CCCeEEEccc---ccccc-CCCCCEEEecCCCCc
Confidence 4689999974 554222222343 6999999988431 1124588997 44332 4789999975321
Q ss_pred -ccc-------CCH-HHHHHHHHhhccCCcEEEEEe
Q 022305 209 -DYL-------TKP-IEVFKEMCQVLKPGGLAIVSF 235 (299)
Q Consensus 209 -~~~-------~d~-~~~l~ei~rvLkpGG~lii~~ 235 (299)
-+. ..+ +.++.=+.++|+|||.|++-+
T Consensus 182 TG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVKV 217 (344)
T 3r24_A 182 TKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKI 217 (344)
T ss_dssp SCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEEE
Confidence 111 123 345566778999999999864
No 296
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=96.07 E-value=0.0087 Score=58.28 Aligned_cols=98 Identities=16% Similarity=0.178 Sum_probs=61.6
Q ss_pred cCCceeeccCcCCcccc------CCCC---------CCCeEEEEeCCHHHHHhcCC--------CCcEEEeccCCCCCCC
Q 022305 137 YYSEVFPPSNTPGVSHF------PPGY---------KQDRIVGMGMNEEELKRNPV--------LTEYVVQDLNLNPKLP 193 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~~~------~~~~---------~~~~v~gvD~S~~ml~~a~~--------~~~~~~~D~~~~~~lp 193 (299)
...+|+|+.||+|.... .... ....++|+|+++.+...|+- ...+..+|. -..|
T Consensus 217 ~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lhg~~~~~I~~~dt---L~~~ 293 (530)
T 3ufb_A 217 LGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLHGLEYPRIDPENS---LRFP 293 (530)
T ss_dssp TTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHHTCSCCEEECSCT---TCSC
T ss_pred CCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhcCCcccccccccc---ccCc
Confidence 34589999999996222 1111 12579999999999887653 234555664 3333
Q ss_pred C----CCCCeeEEEec--cccccc-------------CCH-HHHHHHHHhhcc-------CCcEEEEEecC
Q 022305 194 F----EDNSFDVITNV--VSVDYL-------------TKP-IEVFKEMCQVLK-------PGGLAIVSFSN 237 (299)
Q Consensus 194 f----~~~~FD~Vis~--~~l~~~-------------~d~-~~~l~ei~rvLk-------pGG~lii~~~~ 237 (299)
. +...||+|+++ +...+- .+. ..++..+.+.|| |||.+.+.+|+
T Consensus 294 ~~~~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~~~~~l~~gGr~avVlP~ 364 (530)
T 3ufb_A 294 LREMGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQLIMRKLKRPGHGSDNGGRAAVVVPN 364 (530)
T ss_dssp GGGCCGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHHHHHHBCCTTSSSSSCCEEEEEEEH
T ss_pred hhhhcccccceEEEecCCCCccccccccccCchhcccchhHHHHHHHHHHHhhhhhhccCCCceEEEEecc
Confidence 2 24579999987 221111 011 245677888887 79998888775
No 297
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=95.96 E-value=0.0095 Score=52.43 Aligned_cols=97 Identities=10% Similarity=-0.024 Sum_probs=55.0
Q ss_pred hhcCCceeeccCcCCc-cccCCCCC-CCeEEEEeCCHH--HHHhcC--CCC---cEEEe-ccCCCCCCCCCCCCeeEEEe
Q 022305 135 TKYYSEVFPPSNTPGV-SHFPPGYK-QDRIVGMGMNEE--ELKRNP--VLT---EYVVQ-DLNLNPKLPFEDNSFDVITN 204 (299)
Q Consensus 135 ~~~~~~vLDiGcG~G~-~~~~~~~~-~~~v~gvD~S~~--ml~~a~--~~~---~~~~~-D~~~~~~lpf~~~~FD~Vis 204 (299)
.+...+|||+||++|. +.++.... -..|.|.++... +..... ..+ .++.+ |+ .. .+...+|+|+|
T Consensus 71 ikpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~~~~P~~~~~~Gv~~i~~~~G~Df---~~--~~~~~~DvVLS 145 (269)
T 2px2_A 71 VQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPGHEEPMLMQSYGWNIVTMKSGVDV---FY--KPSEISDTLLC 145 (269)
T ss_dssp CCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTTSCCCCCCCSTTGGGEEEECSCCG---GG--SCCCCCSEEEE
T ss_pred CCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEccccccCCCcccCCCceEEEeeccCCc---cC--CCCCCCCEEEe
Confidence 4445689999999986 33332221 123344444433 222221 123 33335 88 44 33567999998
Q ss_pred cccccccC----CHH---HHHHHHHhhccCCc-EEEEEecC
Q 022305 205 VVSVDYLT----KPI---EVFKEMCQVLKPGG-LAIVSFSN 237 (299)
Q Consensus 205 ~~~l~~~~----d~~---~~l~ei~rvLkpGG-~lii~~~~ 237 (299)
-.+-. .. |.. .+|.-+.++||||| .|++-+-.
T Consensus 146 DMAPn-SG~~~vD~~Rs~~aL~~A~~~Lk~gG~~FvvKVFq 185 (269)
T 2px2_A 146 DIGES-SPSAEIEEQRTLRILEMVSDWLSRGPKEFCIKILC 185 (269)
T ss_dssp CCCCC-CSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESC
T ss_pred CCCCC-CCccHHHHHHHHHHHHHHHHHhhcCCcEEEEEECC
Confidence 65432 22 222 25666679999999 89887544
No 298
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=95.71 E-value=0.004 Score=55.70 Aligned_cols=74 Identities=14% Similarity=0.066 Sum_probs=52.7
Q ss_pred cHHHHHHhh-hcCCceeeccCcCCc--cccCCCCCCCeEEEEeCCHHHHHhcCC----CCcEEEeccCCCCCCC-----C
Q 022305 127 DDPAIAALT-KYYSEVFPPSNTPGV--SHFPPGYKQDRIVGMGMNEEELKRNPV----LTEYVVQDLNLNPKLP-----F 194 (299)
Q Consensus 127 ~~~~~~~l~-~~~~~vLDiGcG~G~--~~~~~~~~~~~v~gvD~S~~ml~~a~~----~~~~~~~D~~~~~~lp-----f 194 (299)
.+.+++.+. +.-..+||.+||.|. ..++.. +++|+|+|.++.+++.+++ ++++++++. .+++ .
T Consensus 11 l~e~le~L~~~~gg~~VD~T~G~GGHS~~il~~--~g~VigiD~Dp~Ai~~A~~L~~~rv~lv~~~f---~~l~~~L~~~ 85 (285)
T 1wg8_A 11 YQEALDLLAVRPGGVYVDATLGGAGHARGILER--GGRVIGLDQDPEAVARAKGLHLPGLTVVQGNF---RHLKRHLAAL 85 (285)
T ss_dssp HHHHHHHHTCCTTCEEEETTCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHTCCTTEEEEESCG---GGHHHHHHHT
T ss_pred HHHHHHhhCCCCCCEEEEeCCCCcHHHHHHHHC--CCEEEEEeCCHHHHHHHHhhccCCEEEEECCc---chHHHHHHHc
Confidence 355666663 345689999999886 222322 6899999999999987753 577888888 5553 2
Q ss_pred CCCCeeEEEec
Q 022305 195 EDNSFDVITNV 205 (299)
Q Consensus 195 ~~~~FD~Vis~ 205 (299)
..++||.|++.
T Consensus 86 g~~~vDgIL~D 96 (285)
T 1wg8_A 86 GVERVDGILAD 96 (285)
T ss_dssp TCSCEEEEEEE
T ss_pred CCCCcCEEEeC
Confidence 23579999963
No 299
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=95.06 E-value=0.035 Score=48.31 Aligned_cols=96 Identities=17% Similarity=0.073 Sum_probs=62.3
Q ss_pred cCCceeeccCcCCc-cc-cCCCCCCCeEEEEeCCHHHHHh-------cCCCCcEEEe-ccCCCCCCCCCCCCeeEEEecc
Q 022305 137 YYSEVFPPSNTPGV-SH-FPPGYKQDRIVGMGMNEEELKR-------NPVLTEYVVQ-DLNLNPKLPFEDNSFDVITNVV 206 (299)
Q Consensus 137 ~~~~vLDiGcG~G~-~~-~~~~~~~~~v~gvD~S~~ml~~-------a~~~~~~~~~-D~~~~~~lpf~~~~FD~Vis~~ 206 (299)
....|||+||++|. .. ........+|+|+|+-..--+. .-..++|+.+ |+ ..++ ...+|+|+|-.
T Consensus 78 ~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~ghe~P~~~~s~gwn~v~fk~gvDv---~~~~--~~~~DtllcDI 152 (267)
T 3p8z_A 78 PEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGHEEPVPMSTYGWNIVKLMSGKDV---FYLP--PEKCDTLLCDI 152 (267)
T ss_dssp CCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTSCCCCCCCCTTTTSEEEECSCCG---GGCC--CCCCSEEEECC
T ss_pred CCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCccCcchhhhcCcCceEEEeccce---eecC--CccccEEEEec
Confidence 44589999999886 22 2333334589999998643321 1123788888 87 4443 26699999975
Q ss_pred cccccCCH-------HHHHHHHHhhccCCcEEEEEecCcc
Q 022305 207 SVDYLTKP-------IEVFKEMCQVLKPGGLAIVSFSNRC 239 (299)
Q Consensus 207 ~l~~~~d~-------~~~l~ei~rvLkpGG~lii~~~~~~ 239 (299)
.- --+++ .++|+-+.+.|++ |.|++-+-.+.
T Consensus 153 ge-Ss~~~~vE~~RtlrvLela~~wL~~-~~fc~KVl~py 190 (267)
T 3p8z_A 153 GE-SSPSPTVEESRTIRVLKMVEPWLKN-NQFCIKVLNPY 190 (267)
T ss_dssp CC-CCSCHHHHHHHHHHHHHHHGGGCSS-CEEEEEESCCC
T ss_pred CC-CCCChhhhhhHHHHHHHHHHHhccc-CCEEEEEccCC
Confidence 54 22332 2366677889999 78888766544
No 300
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=94.26 E-value=0.0083 Score=52.73 Aligned_cols=51 Identities=16% Similarity=0.135 Sum_probs=39.2
Q ss_pred HHHHHHhhhcCCceeeccCcCCccccCCCCCCCeEEEEeCCHHHHHhcCCC
Q 022305 128 DPAIAALTKYYSEVFPPSNTPGVSHFPPGYKQDRIVGMGMNEEELKRNPVL 178 (299)
Q Consensus 128 ~~~~~~l~~~~~~vLDiGcG~G~~~~~~~~~~~~v~gvD~S~~ml~~a~~~ 178 (299)
+.+++...+....|||+.||+|+........+.+++|+|+++.+++.++++
T Consensus 203 ~~~i~~~~~~~~~vlD~f~GsGtt~~~a~~~gr~~ig~e~~~~~~~~~~~r 253 (260)
T 1g60_A 203 ERIIRASSNPNDLVLDCFMGSGTTAIVAKKLGRNFIGCDMNAEYVNQANFV 253 (260)
T ss_dssp HHHHHHHCCTTCEEEESSCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHH
T ss_pred HHHHHHhCCCCCEEEECCCCCCHHHHHHHHcCCeEEEEeCCHHHHHHHHHH
Confidence 334444455667899999999986666555678999999999999877654
No 301
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=94.17 E-value=0.17 Score=45.65 Aligned_cols=100 Identities=12% Similarity=0.051 Sum_probs=68.6
Q ss_pred hcCCceeeccCcCCccccCCCCC-CCeEEEEeCCHHHHHhcC-----------CCCcEEEeccCCCCCC-------CCCC
Q 022305 136 KYYSEVFPPSNTPGVSHFPPGYK-QDRIVGMGMNEEELKRNP-----------VLTEYVVQDLNLNPKL-------PFED 196 (299)
Q Consensus 136 ~~~~~vLDiGcG~G~~~~~~~~~-~~~v~gvD~S~~ml~~a~-----------~~~~~~~~D~~~~~~l-------pf~~ 196 (299)
.....|+++|||-=+..+....+ +.+++-|| -|..++..+ .+..++.+|+.. .+ .|..
T Consensus 101 ~g~~QvV~LGaGlDTra~Rl~~~~~~~v~evD-~P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~d--~~~~~l~~~g~d~ 177 (310)
T 2uyo_A 101 DGIRQFVILASGLDSRAYRLDWPTGTTVYEID-QPKVLAYKSTTLAEHGVTPTADRREVPIDLRQ--DWPPALRSAGFDP 177 (310)
T ss_dssp TTCCEEEEETCTTCCHHHHSCCCTTCEEEEEE-CHHHHHHHHHHHHHTTCCCSSEEEEEECCTTS--CHHHHHHHTTCCT
T ss_pred hCCCeEEEeCCCCCchhhhccCCCCcEEEEcC-CHHHHHHHHHHHHhcCCCCCCCeEEEecchHh--hHHHHHHhccCCC
Confidence 34567999999855544444333 47999999 477776332 235678888842 21 1222
Q ss_pred CCeeEEEecccccccC--CHHHHHHHHHhhccCCcEEEEEecCc
Q 022305 197 NSFDVITNVVSVDYLT--KPIEVFKEMCQVLKPGGLAIVSFSNR 238 (299)
Q Consensus 197 ~~FD~Vis~~~l~~~~--d~~~~l~ei~rvLkpGG~lii~~~~~ 238 (299)
+.-=++++-.+++|++ +...+++.+...+.||+.++++..+.
T Consensus 178 ~~Pt~~i~Egvl~Yl~~~~~~~ll~~l~~~~~~gs~l~~d~~~~ 221 (310)
T 2uyo_A 178 SARTAWLAEGLLMYLPATAQDGLFTEIGGLSAVGSRIAVETSPL 221 (310)
T ss_dssp TSCEEEEECSCGGGSCHHHHHHHHHHHHHTCCTTCEEEEECCCT
T ss_pred CCCEEEEEechHhhCCHHHHHHHHHHHHHhCCCCeEEEEEecCC
Confidence 3344778888999996 45678899999889999999997654
No 302
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=93.23 E-value=0.03 Score=50.05 Aligned_cols=56 Identities=21% Similarity=0.426 Sum_probs=38.2
Q ss_pred CcEEEeccCCCCC-CC-CCCCCeeEEEecccc----c----------------ccCCHHHHHHHHHhhccCCcEEEEEec
Q 022305 179 TEYVVQDLNLNPK-LP-FEDNSFDVITNVVSV----D----------------YLTKPIEVFKEMCQVLKPGGLAIVSFS 236 (299)
Q Consensus 179 ~~~~~~D~~~~~~-lp-f~~~~FD~Vis~~~l----~----------------~~~d~~~~l~ei~rvLkpGG~lii~~~ 236 (299)
.+++++|. .+ ++ +++++||+|+++==. . ++.....+++++.|+|||||.+++.+.
T Consensus 22 ~~i~~gD~---~~~l~~l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~~~ 98 (297)
T 2zig_A 22 HRLHVGDA---REVLASFPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVIVVG 98 (297)
T ss_dssp EEEEESCH---HHHHTTSCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CEEEECcH---HHHHhhCCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEEEEC
Confidence 46778887 33 22 467889999976211 1 111235678899999999999988876
Q ss_pred C
Q 022305 237 N 237 (299)
Q Consensus 237 ~ 237 (299)
.
T Consensus 99 d 99 (297)
T 2zig_A 99 D 99 (297)
T ss_dssp C
T ss_pred C
Confidence 4
No 303
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=91.94 E-value=0.075 Score=43.96 Aligned_cols=87 Identities=25% Similarity=0.242 Sum_probs=54.3
Q ss_pred CCceeeccCcCCccccCC---CCCCCeEEEEeCCHHHHHhcCCC-CcEEEeccCCCCCC-----C-CCCCCeeEEEeccc
Q 022305 138 YSEVFPPSNTPGVSHFPP---GYKQDRIVGMGMNEEELKRNPVL-TEYVVQDLNLNPKL-----P-FEDNSFDVITNVVS 207 (299)
Q Consensus 138 ~~~vLDiGcG~G~~~~~~---~~~~~~v~gvD~S~~ml~~a~~~-~~~~~~D~~~~~~l-----p-f~~~~FD~Vis~~~ 207 (299)
.++||-.|++.|.+.... ...+.+|+++|.+++.++.+++. .+. ..|... ... . ...+.+|+|+.+..
T Consensus 39 g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~g~~~-~~d~~~-~~~~~~~~~~~~~~~~D~vi~~~g 116 (198)
T 1pqw_A 39 GERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSRLGVEY-VGDSRS-VDFADEILELTDGYGVDVVLNSLA 116 (198)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHTTCCSE-EEETTC-STHHHHHHHHTTTCCEEEEEECCC
T ss_pred CCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCE-EeeCCc-HHHHHHHHHHhCCCCCeEEEECCc
Confidence 357999996555433221 12367999999999888766543 222 234411 111 0 12246999997643
Q ss_pred ccccCCHHHHHHHHHhhccCCcEEEE
Q 022305 208 VDYLTKPIEVFKEMCQVLKPGGLAIV 233 (299)
Q Consensus 208 l~~~~d~~~~l~ei~rvLkpGG~lii 233 (299)
...+++..+.|+|||.+++
T Consensus 117 -------~~~~~~~~~~l~~~G~~v~ 135 (198)
T 1pqw_A 117 -------GEAIQRGVQILAPGGRFIE 135 (198)
T ss_dssp -------THHHHHHHHTEEEEEEEEE
T ss_pred -------hHHHHHHHHHhccCCEEEE
Confidence 2467899999999998765
No 304
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=90.82 E-value=0.17 Score=46.30 Aligned_cols=77 Identities=10% Similarity=0.039 Sum_probs=52.4
Q ss_pred ccHHHHHHhh-hcCCceeeccCcCCc--cccCCC-CCCCeEEEEeCCHHHHHhcCC----CCcEEEeccCCCCCCC--CC
Q 022305 126 IDDPAIAALT-KYYSEVFPPSNTPGV--SHFPPG-YKQDRIVGMGMNEEELKRNPV----LTEYVVQDLNLNPKLP--FE 195 (299)
Q Consensus 126 l~~~~~~~l~-~~~~~vLDiGcG~G~--~~~~~~-~~~~~v~gvD~S~~ml~~a~~----~~~~~~~D~~~~~~lp--f~ 195 (299)
+-++.++.|. +....++|..||.|. ..++.. .+.++|+|+|.++.+++.+++ +++++.++. .++. .+
T Consensus 45 Ll~Evl~~L~i~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~rL~~~Rv~lv~~nF---~~l~~~L~ 121 (347)
T 3tka_A 45 LLDEAVNGLNIRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAKTIDDPRFSIIHGPF---SALGEYVA 121 (347)
T ss_dssp TTHHHHHHTCCCTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHTTCCCTTEEEEESCG---GGHHHHHH
T ss_pred cHHHHHHhhCCCCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHhhcCCcEEEEeCCH---HHHHHHHH
Confidence 3455677774 445689999999885 333333 356899999999999998753 356777776 4442 11
Q ss_pred ----CCCeeEEEec
Q 022305 196 ----DNSFDVITNV 205 (299)
Q Consensus 196 ----~~~FD~Vis~ 205 (299)
.+++|.|+..
T Consensus 122 ~~g~~~~vDgILfD 135 (347)
T 3tka_A 122 ERDLIGKIDGILLD 135 (347)
T ss_dssp HTTCTTCEEEEEEE
T ss_pred hcCCCCcccEEEEC
Confidence 1369999844
No 305
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=89.60 E-value=0.35 Score=44.09 Aligned_cols=98 Identities=10% Similarity=0.019 Sum_probs=64.9
Q ss_pred cCCceeeccCcCCccccCCCC--CCCeEEEEeCCHHHHHhc-----------------------------CCCCcEEEec
Q 022305 137 YYSEVFPPSNTPGVSHFPPGY--KQDRIVGMGMNEEELKRN-----------------------------PVLTEYVVQD 185 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~~~~~~~--~~~~v~gvD~S~~ml~~a-----------------------------~~~~~~~~~D 185 (299)
....|+.+|||..+..+.... ++..++-||. |++++.- ..+..++.+|
T Consensus 97 ~~~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~-P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~v~~D 175 (334)
T 1rjd_A 97 EKVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDY-NESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYKLAACD 175 (334)
T ss_dssp SSEEEEEETCTTCCTHHHHHHHCTTEEEEEEEC-HHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSEEEEECC
T ss_pred CCcEEEEeCCCCccHHHHhcCcCCCCEEEECCC-HHHHHHHHHHhhhccchhhhcccccccccccccccCCCceEEEecC
Confidence 346799999998875554332 4678888898 6665421 1346678888
Q ss_pred cCCC-------CCCCCCCCCeeEEEecccccccC--CHHHHHHHHHhhccCCcEE-EEEecC
Q 022305 186 LNLN-------PKLPFEDNSFDVITNVVSVDYLT--KPIEVFKEMCQVLKPGGLA-IVSFSN 237 (299)
Q Consensus 186 ~~~~-------~~lpf~~~~FD~Vis~~~l~~~~--d~~~~l~ei~rvLkpGG~l-ii~~~~ 237 (299)
+... ...+ ..+...++++-.++.|++ +..++++.+.+.. |+|.+ +++..+
T Consensus 176 L~d~~w~~~ll~~~~-d~~~Ptl~iaEgvL~YL~~~~~~~ll~~ia~~~-~~~~~v~~e~i~ 235 (334)
T 1rjd_A 176 LNDITETTRLLDVCT-KREIPTIVISECLLCYMHNNESQLLINTIMSKF-SHGLWISYDPIG 235 (334)
T ss_dssp TTCHHHHHHHHHTTC-CTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHC-SSEEEEEEEECC
T ss_pred CCCcHHHHHHHHhcC-CCCCCEEEEEcchhhCCCHHHHHHHHHHHHhhC-CCcEEEEEeccC
Confidence 8321 1112 335678999999999996 4567888888877 67755 566443
No 306
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=89.55 E-value=0.17 Score=44.56 Aligned_cols=102 Identities=14% Similarity=0.082 Sum_probs=64.6
Q ss_pred HHHhhhcCCceeeccCcCCccccC---------CCCCCCeEEEEe-----CCH----------------------HHHHh
Q 022305 131 IAALTKYYSEVFPPSNTPGVSHFP---------PGYKQDRIVGMG-----MNE----------------------EELKR 174 (299)
Q Consensus 131 ~~~l~~~~~~vLDiGcG~G~~~~~---------~~~~~~~v~gvD-----~S~----------------------~ml~~ 174 (299)
.+.+......|++.|+-.|.+... ...+..+++|.| +.+ +.++.
T Consensus 63 ~~~i~~vpG~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~ 142 (257)
T 3tos_A 63 YRQVLDVPGVIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKE 142 (257)
T ss_dssp HHHTTTSCSEEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHH
T ss_pred HHHhhCCCCeEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHH
Confidence 344456678899999987752221 112457899998 321 11110
Q ss_pred -----------c--CCCCcEEEeccCCCCCCC-----CCCCCeeEEEecccccccCCHHHHHHHHHhhccCCcEEEEEec
Q 022305 175 -----------N--PVLTEYVVQDLNLNPKLP-----FEDNSFDVITNVVSVDYLTKPIEVFKEMCQVLKPGGLAIVSFS 236 (299)
Q Consensus 175 -----------a--~~~~~~~~~D~~~~~~lp-----f~~~~FD~Vis~~~l~~~~d~~~~l~ei~rvLkpGG~lii~~~ 236 (299)
. .++++++.+++. +.+| .+..+||+|+.-.- +...-...++.+...|+|||+++++.-
T Consensus 143 ~l~~~~~~~~~g~~~~~i~li~G~~~--dTL~~~l~~~~~~~~dlv~ID~D--~Y~~t~~~le~~~p~l~~GGvIv~DD~ 218 (257)
T 3tos_A 143 VLDAHECSDFFGHVTQRSVLVEGDVR--ETVPRYLAENPQTVIALAYFDLD--LYEPTKAVLEAIRPYLTKGSIVAFDEL 218 (257)
T ss_dssp HHHHHHTTSTTTTSCCSEEEEESCHH--HHHHHHHHHCTTCCEEEEEECCC--CHHHHHHHHHHHGGGEEEEEEEEESST
T ss_pred HHHHHhhhhhcCCCCCcEEEEEecHH--HHHHHHHHhCCCCceEEEEEcCc--ccchHHHHHHHHHHHhCCCcEEEEcCC
Confidence 0 134788888874 4444 24557999987642 223445678999999999999999754
No 307
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=88.07 E-value=0.28 Score=44.30 Aligned_cols=57 Identities=21% Similarity=0.350 Sum_probs=38.9
Q ss_pred CcEEEeccCCCCCCC-CCCCCeeEEEec--ccc------------cccCCHHHHHHHHHhhccCCcEEEEEecC
Q 022305 179 TEYVVQDLNLNPKLP-FEDNSFDVITNV--VSV------------DYLTKPIEVFKEMCQVLKPGGLAIVSFSN 237 (299)
Q Consensus 179 ~~~~~~D~~~~~~lp-f~~~~FD~Vis~--~~l------------~~~~d~~~~l~ei~rvLkpGG~lii~~~~ 237 (299)
..++++|.. +.+. +++++||+|++. +.. +++......|+++.|+|||||.+++....
T Consensus 15 ~~ii~gD~~--~~l~~l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~~~d 86 (323)
T 1boo_A 15 GSMYIGDSL--ELLESFPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVDFGG 86 (323)
T ss_dssp EEEEESCHH--HHGGGSCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred ceEEeCcHH--HHHhhCCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEEECC
Confidence 556777762 1233 457889998875 111 12234678999999999999999998664
No 308
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=87.98 E-value=0.13 Score=46.58 Aligned_cols=51 Identities=12% Similarity=0.042 Sum_probs=40.3
Q ss_pred HHHHHHhhhcCCceeeccCcCCccccCCCCCCCeEEEEeCCHHHHHhcCCC
Q 022305 128 DPAIAALTKYYSEVFPPSNTPGVSHFPPGYKQDRIVGMGMNEEELKRNPVL 178 (299)
Q Consensus 128 ~~~~~~l~~~~~~vLDiGcG~G~~~~~~~~~~~~v~gvD~S~~ml~~a~~~ 178 (299)
..++....+..+.|||.-||+|+........+.+.+|+|+++.+.+.++++
T Consensus 243 ~~~i~~~~~~~~~VlDpF~GsGtt~~aa~~~gr~~ig~e~~~~~~~~~~~r 293 (323)
T 1boo_A 243 EFFIRMLTEPDDLVVDIFGGSNTTGLVAERESRKWISFEMKPEYVAASAFR 293 (323)
T ss_dssp HHHHHHHCCTTCEEEETTCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHGG
T ss_pred HHHHHHhCCCCCEEEECCCCCCHHHHHHHHcCCCEEEEeCCHHHHHHHHHH
Confidence 444555556667899999999996666665688999999999999887764
No 309
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=87.61 E-value=0.12 Score=46.75 Aligned_cols=51 Identities=10% Similarity=0.213 Sum_probs=34.3
Q ss_pred CcEEEeccCCCCCCC-CCCCCeeEEEecccccccCCH----HHHHHHHHhhccCCcEEE
Q 022305 179 TEYVVQDLNLNPKLP-FEDNSFDVITNVVSVDYLTKP----IEVFKEMCQVLKPGGLAI 232 (299)
Q Consensus 179 ~~~~~~D~~~~~~lp-f~~~~FD~Vis~~~l~~~~d~----~~~l~ei~rvLkpGG~li 232 (299)
.++..+|+. +.++ +++..||+|+--. +---.+| ..+|++|++.++|||.+.
T Consensus 168 L~l~~GDa~--~~l~~l~~~~~Da~flDg-FsP~kNPeLWs~e~f~~l~~~~~pgg~la 223 (308)
T 3vyw_A 168 LKVLLGDAR--KRIKEVENFKADAVFHDA-FSPYKNPELWTLDFLSLIKERIDEKGYWV 223 (308)
T ss_dssp EEEEESCHH--HHGGGCCSCCEEEEEECC-SCTTTSGGGGSHHHHHHHHTTEEEEEEEE
T ss_pred EEEEechHH--HHHhhhcccceeEEEeCC-CCcccCcccCCHHHHHHHHHHhCCCcEEE
Confidence 356677773 3344 3455799998632 2222344 589999999999999775
No 310
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=87.13 E-value=0.22 Score=44.81 Aligned_cols=88 Identities=14% Similarity=0.139 Sum_probs=55.3
Q ss_pred CCceeeccCcCCccccCC---CCCCCeEEEEeCCHHHHHhcCCC-CcEEEeccCCCCCC-----CCCCCCeeEEEecccc
Q 022305 138 YSEVFPPSNTPGVSHFPP---GYKQDRIVGMGMNEEELKRNPVL-TEYVVQDLNLNPKL-----PFEDNSFDVITNVVSV 208 (299)
Q Consensus 138 ~~~vLDiGcG~G~~~~~~---~~~~~~v~gvD~S~~ml~~a~~~-~~~~~~D~~~~~~l-----pf~~~~FD~Vis~~~l 208 (299)
.+++|-.|++.|.+.... ...+++|+++|.+++.++.+++. .. ...|....+.+ ....+.+|+|+.+..-
T Consensus 146 g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~g~~-~~~d~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 224 (333)
T 1v3u_A 146 GETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQIGFD-AAFNYKTVNSLEEALKKASPDGYDCYFDNVGG 224 (333)
T ss_dssp SCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCS-EEEETTSCSCHHHHHHHHCTTCEEEEEESSCH
T ss_pred CCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCc-EEEecCCHHHHHHHHHHHhCCCCeEEEECCCh
Confidence 467999998655533321 22467999999999888776443 22 23354210111 0112479999977652
Q ss_pred cccCCHHHHHHHHHhhccCCcEEEE
Q 022305 209 DYLTKPIEVFKEMCQVLKPGGLAIV 233 (299)
Q Consensus 209 ~~~~d~~~~l~ei~rvLkpGG~lii 233 (299)
..+++..+.|+|||.+++
T Consensus 225 -------~~~~~~~~~l~~~G~~v~ 242 (333)
T 1v3u_A 225 -------EFLNTVLSQMKDFGKIAI 242 (333)
T ss_dssp -------HHHHHHHTTEEEEEEEEE
T ss_pred -------HHHHHHHHHHhcCCEEEE
Confidence 357888999999998765
No 311
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=85.02 E-value=0.56 Score=43.29 Aligned_cols=93 Identities=18% Similarity=0.131 Sum_probs=57.1
Q ss_pred cCCceeeccCcC-Ccc--ccCCCCCCC-eEEEEeCCHHHHHhcCCC-CcEEEeccCCCCCC-C-----C-CCCCeeEEEe
Q 022305 137 YYSEVFPPSNTP-GVS--HFPPGYKQD-RIVGMGMNEEELKRNPVL-TEYVVQDLNLNPKL-P-----F-EDNSFDVITN 204 (299)
Q Consensus 137 ~~~~vLDiGcG~-G~~--~~~~~~~~~-~v~gvD~S~~ml~~a~~~-~~~~~~D~~~~~~l-p-----f-~~~~FD~Vis 204 (299)
..++||-+|+|. |.. .++.. .++ +|+++|.|++.++.+++. .+ ..|... +++ . . ....||+|+-
T Consensus 185 ~g~~VlV~GaG~vG~~aiqlak~-~Ga~~Vi~~~~~~~~~~~a~~lGa~--~i~~~~-~~~~~~~~~~~~~g~g~Dvvid 260 (398)
T 2dph_A 185 PGSHVYIAGAGPVGRCAAAGARL-LGAACVIVGDQNPERLKLLSDAGFE--TIDLRN-SAPLRDQIDQILGKPEVDCGVD 260 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHH-HTCSEEEEEESCHHHHHHHHTTTCE--EEETTS-SSCHHHHHHHHHSSSCEEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHH-cCCCEEEEEcCCHHHHHHHHHcCCc--EEcCCC-cchHHHHHHHHhCCCCCCEEEE
Confidence 346899999852 321 11222 355 899999999998888764 33 334310 111 0 0 1236999996
Q ss_pred ccccccc--------CCHHHHHHHHHhhccCCcEEEE
Q 022305 205 VVSVDYL--------TKPIEVFKEMCQVLKPGGLAIV 233 (299)
Q Consensus 205 ~~~l~~~--------~d~~~~l~ei~rvLkpGG~lii 233 (299)
...-... .++...+++..+.|+|||.+++
T Consensus 261 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~ 297 (398)
T 2dph_A 261 AVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGI 297 (398)
T ss_dssp CSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEEC
T ss_pred CCCCccccccccccccccHHHHHHHHHHHhcCCEEEE
Confidence 6543321 1244678999999999998765
No 312
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=83.47 E-value=0.41 Score=42.99 Aligned_cols=88 Identities=16% Similarity=0.100 Sum_probs=55.7
Q ss_pred cCCceeeccCcCCccccCC---CCCCCeEEEEeCCHHHHHhc-CCC-CcEEEeccCCCCCCC-----CCCCCeeEEEecc
Q 022305 137 YYSEVFPPSNTPGVSHFPP---GYKQDRIVGMGMNEEELKRN-PVL-TEYVVQDLNLNPKLP-----FEDNSFDVITNVV 206 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~~~~~---~~~~~~v~gvD~S~~ml~~a-~~~-~~~~~~D~~~~~~lp-----f~~~~FD~Vis~~ 206 (299)
.-++||-.|++.|.+.... ...+++|+++|.+++-++.+ ++. .+. ..|... +.+. ...+.+|+|+.+.
T Consensus 149 ~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~-~~~~~~-~~~~~~~~~~~~~~~d~vi~~~ 226 (336)
T 4b7c_A 149 NGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEELGFDG-AIDYKN-EDLAAGLKRECPKGIDVFFDNV 226 (336)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCCSE-EEETTT-SCHHHHHHHHCTTCEEEEEESS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCE-EEECCC-HHHHHHHHHhcCCCceEEEECC
Confidence 3467999998555533321 22467999999999888877 443 222 223310 1110 1134699998765
Q ss_pred cccccCCHHHHHHHHHhhccCCcEEEE
Q 022305 207 SVDYLTKPIEVFKEMCQVLKPGGLAIV 233 (299)
Q Consensus 207 ~l~~~~d~~~~l~ei~rvLkpGG~lii 233 (299)
.- ..+.+..+.|++||.+++
T Consensus 227 g~-------~~~~~~~~~l~~~G~iv~ 246 (336)
T 4b7c_A 227 GG-------EILDTVLTRIAFKARIVL 246 (336)
T ss_dssp CH-------HHHHHHHTTEEEEEEEEE
T ss_pred Cc-------chHHHHHHHHhhCCEEEE
Confidence 42 368899999999998775
No 313
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=83.39 E-value=0.28 Score=44.45 Aligned_cols=89 Identities=11% Similarity=0.196 Sum_probs=56.4
Q ss_pred cCCceeeccCcCCccccCC---CCC-CCeEEEEeCCHHHHHhcCCC-CcEEEeccCCCCCC-----CCCC-CCeeEEEec
Q 022305 137 YYSEVFPPSNTPGVSHFPP---GYK-QDRIVGMGMNEEELKRNPVL-TEYVVQDLNLNPKL-----PFED-NSFDVITNV 205 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~~~~~---~~~-~~~v~gvD~S~~ml~~a~~~-~~~~~~D~~~~~~l-----pf~~-~~FD~Vis~ 205 (299)
..++||-.|+|+|.+.... ... +++|+++|.+++.++.+++. .+.+ .|... ... .... +.+|+|+.+
T Consensus 170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~~g~~~~-~~~~~-~~~~~~~~~~~~~~~~d~vi~~ 247 (347)
T 1jvb_A 170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYV-INASM-QDPLAEIRRITESKGVDAVIDL 247 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTCSEE-EETTT-SCHHHHHHHHTTTSCEEEEEES
T ss_pred CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCEE-ecCCC-ccHHHHHHHHhcCCCceEEEEC
Confidence 3467999998867644321 123 67999999999888776542 2222 23310 111 1112 479999976
Q ss_pred ccccccCCHHHHHHHHHhhccCCcEEEE
Q 022305 206 VSVDYLTKPIEVFKEMCQVLKPGGLAIV 233 (299)
Q Consensus 206 ~~l~~~~d~~~~l~ei~rvLkpGG~lii 233 (299)
..- ...+++..+.|+|||.+++
T Consensus 248 ~g~------~~~~~~~~~~l~~~G~iv~ 269 (347)
T 1jvb_A 248 NNS------EKTLSVYPKALAKQGKYVM 269 (347)
T ss_dssp CCC------HHHHTTGGGGEEEEEEEEE
T ss_pred CCC------HHHHHHHHHHHhcCCEEEE
Confidence 542 3467888999999998765
No 314
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=82.99 E-value=1 Score=41.44 Aligned_cols=93 Identities=18% Similarity=0.212 Sum_probs=57.8
Q ss_pred CCceeeccCcCCccccCC---CCCCC-eEEEEeCCHHHHHhcCCC-CcEEEeccCCCCCCC------CCCCCeeEEEecc
Q 022305 138 YSEVFPPSNTPGVSHFPP---GYKQD-RIVGMGMNEEELKRNPVL-TEYVVQDLNLNPKLP------FEDNSFDVITNVV 206 (299)
Q Consensus 138 ~~~vLDiGcG~G~~~~~~---~~~~~-~v~gvD~S~~ml~~a~~~-~~~~~~D~~~~~~lp------f~~~~FD~Vis~~ 206 (299)
..+||-.|+| |.+.+.. ...++ +|+++|.+++-++.+++. .+ ..|......+. .....+|+|+-..
T Consensus 186 g~~VlV~GaG-~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~lGa~--~i~~~~~~~~~~~v~~~t~g~g~Dvvid~~ 262 (398)
T 1kol_A 186 GSTVYVAGAG-PVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGFE--IADLSLDTPLHEQIAALLGEPEVDCAVDAV 262 (398)
T ss_dssp TCEEEEECCS-HHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCE--EEETTSSSCHHHHHHHHHSSSCEEEEEECC
T ss_pred CCEEEEECCc-HHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHcCCc--EEccCCcchHHHHHHHHhCCCCCCEEEECC
Confidence 4678888875 3322221 11355 799999999988887664 33 23331001010 1124699999654
Q ss_pred cc---------cccCCHHHHHHHHHhhccCCcEEEE
Q 022305 207 SV---------DYLTKPIEVFKEMCQVLKPGGLAIV 233 (299)
Q Consensus 207 ~l---------~~~~d~~~~l~ei~rvLkpGG~lii 233 (299)
.- .|.+++...+++..++|++||.+++
T Consensus 263 G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~ 298 (398)
T 1kol_A 263 GFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGI 298 (398)
T ss_dssp CTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEE
T ss_pred CCcccccccccccccchHHHHHHHHHHHhcCCEEEE
Confidence 42 2345667789999999999998765
No 315
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=81.44 E-value=0.91 Score=40.95 Aligned_cols=43 Identities=23% Similarity=0.239 Sum_probs=29.3
Q ss_pred CCCCeeEEEec--cc---------ccccCCHHHHHHHHHhhccCCcEEEEEecC
Q 022305 195 EDNSFDVITNV--VS---------VDYLTKPIEVFKEMCQVLKPGGLAIVSFSN 237 (299)
Q Consensus 195 ~~~~FD~Vis~--~~---------l~~~~d~~~~l~ei~rvLkpGG~lii~~~~ 237 (299)
++++||+|++- +. -.++......|.++.|+|||||.+++....
T Consensus 55 ~~~svDlI~tDPPY~~~~d~~~~~~~~~~~~~~~l~~~~rvLk~~G~i~i~~~~ 108 (319)
T 1eg2_A 55 PDDSVQLIICDPPYNIMLADWDDHMDYIGWAKRWLAEAERVLSPTGSIAIFGGL 108 (319)
T ss_dssp CTTCEEEEEECCCSBCCGGGGGTCSSHHHHHHHHHHHHHHHEEEEEEEEEEECS
T ss_pred ccCCcCEEEECCCCCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCeEEEEEcCc
Confidence 45677777753 11 112234567889999999999999887553
No 316
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=81.41 E-value=0.82 Score=41.07 Aligned_cols=88 Identities=13% Similarity=0.095 Sum_probs=55.1
Q ss_pred CCceeeccCcCCccccCC---CCCCCeEEEEeCCHHHHHhcC-CC-CcEEEeccCCCCCCC-----CCCCCeeEEEeccc
Q 022305 138 YSEVFPPSNTPGVSHFPP---GYKQDRIVGMGMNEEELKRNP-VL-TEYVVQDLNLNPKLP-----FEDNSFDVITNVVS 207 (299)
Q Consensus 138 ~~~vLDiGcG~G~~~~~~---~~~~~~v~gvD~S~~ml~~a~-~~-~~~~~~D~~~~~~lp-----f~~~~FD~Vis~~~ 207 (299)
.++||-.|++.|.+.... ...+++|+++|.+++-++.++ +. .+. ..|......+. ...+.+|+|+.+..
T Consensus 156 g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~g~~~-~~d~~~~~~~~~~~~~~~~~~~d~vi~~~g 234 (345)
T 2j3h_A 156 GETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKFGFDD-AFNYKEESDLTAALKRCFPNGIDIYFENVG 234 (345)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTSCCSE-EEETTSCSCSHHHHHHHCTTCEEEEEESSC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCce-EEecCCHHHHHHHHHHHhCCCCcEEEECCC
Confidence 467999998555433321 124679999999998887765 32 222 23431101111 11246999987754
Q ss_pred ccccCCHHHHHHHHHhhccCCcEEEE
Q 022305 208 VDYLTKPIEVFKEMCQVLKPGGLAIV 233 (299)
Q Consensus 208 l~~~~d~~~~l~ei~rvLkpGG~lii 233 (299)
- ..+++..+.|++||.+++
T Consensus 235 ~-------~~~~~~~~~l~~~G~~v~ 253 (345)
T 2j3h_A 235 G-------KMLDAVLVNMNMHGRIAV 253 (345)
T ss_dssp H-------HHHHHHHTTEEEEEEEEE
T ss_pred H-------HHHHHHHHHHhcCCEEEE
Confidence 2 368889999999998765
No 317
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=80.89 E-value=0.66 Score=41.80 Aligned_cols=87 Identities=13% Similarity=0.036 Sum_probs=54.5
Q ss_pred CCceeeccCcCCccccCC---CCCCC-eEEEEeCCHHHHHhcCCCCcEEEeccCCCCCCC-----CCCCCeeEEEecccc
Q 022305 138 YSEVFPPSNTPGVSHFPP---GYKQD-RIVGMGMNEEELKRNPVLTEYVVQDLNLNPKLP-----FEDNSFDVITNVVSV 208 (299)
Q Consensus 138 ~~~vLDiGcG~G~~~~~~---~~~~~-~v~gvD~S~~ml~~a~~~~~~~~~D~~~~~~lp-----f~~~~FD~Vis~~~l 208 (299)
..+||-.|+| |.+.+.. ...+. +|+++|.+++-++.+++. --...|... +++. ...+.+|+|+....-
T Consensus 165 g~~VlV~GaG-~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~l-a~~v~~~~~-~~~~~~~~~~~~~g~D~vid~~g~ 241 (343)
T 2dq4_A 165 GKSVLITGAG-PIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY-ADRLVNPLE-EDLLEVVRRVTGSGVEVLLEFSGN 241 (343)
T ss_dssp TSCEEEECCS-HHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTT-CSEEECTTT-SCHHHHHHHHHSSCEEEEEECSCC
T ss_pred CCEEEEECCC-HHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-HHhccCcCc-cCHHHHHHHhcCCCCCEEEECCCC
Confidence 4578888884 4433321 12356 899999999998888765 222334310 1110 012469999866432
Q ss_pred cccCCHHHHHHHHHhhccCCcEEEE
Q 022305 209 DYLTKPIEVFKEMCQVLKPGGLAIV 233 (299)
Q Consensus 209 ~~~~d~~~~l~ei~rvLkpGG~lii 233 (299)
...+++..+.|++||.+++
T Consensus 242 ------~~~~~~~~~~l~~~G~iv~ 260 (343)
T 2dq4_A 242 ------EAAIHQGLMALIPGGEARI 260 (343)
T ss_dssp ------HHHHHHHHHHEEEEEEEEE
T ss_pred ------HHHHHHHHHHHhcCCEEEE
Confidence 3567889999999997765
No 318
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=80.89 E-value=0.17 Score=45.70 Aligned_cols=87 Identities=15% Similarity=0.150 Sum_probs=53.0
Q ss_pred CCceeeccCcCCccccCC---CCCCCeEEEEeCCHHHHHhcCCC-CcEEEeccCCCCCCC------CCCCCeeEEEeccc
Q 022305 138 YSEVFPPSNTPGVSHFPP---GYKQDRIVGMGMNEEELKRNPVL-TEYVVQDLNLNPKLP------FEDNSFDVITNVVS 207 (299)
Q Consensus 138 ~~~vLDiGcG~G~~~~~~---~~~~~~v~gvD~S~~ml~~a~~~-~~~~~~D~~~~~~lp------f~~~~FD~Vis~~~ 207 (299)
..+||-.|+|+|.+.... ...+++|+++|.+++-++.+++. .+.+ .|... ..+. .....+|+|+.+..
T Consensus 145 g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lga~~~-~~~~~-~~~~~~~~~~~~~~g~Dvvid~~g 222 (340)
T 3gms_A 145 NDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLRLGAAYV-IDTST-APLYETVMELTNGIGADAAIDSIG 222 (340)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEE-EETTT-SCHHHHHHHHTTTSCEEEEEESSC
T ss_pred CCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhCCCcEE-EeCCc-ccHHHHHHHHhCCCCCcEEEECCC
Confidence 468999999876644322 22467999999998877766553 2222 23210 1110 12347999997654
Q ss_pred ccccCCHHHHHHHHHhhccCCcEEEE
Q 022305 208 VDYLTKPIEVFKEMCQVLKPGGLAIV 233 (299)
Q Consensus 208 l~~~~d~~~~l~ei~rvLkpGG~lii 233 (299)
-. .+.+..+.|+|||.+++
T Consensus 223 ~~-------~~~~~~~~l~~~G~iv~ 241 (340)
T 3gms_A 223 GP-------DGNELAFSLRPNGHFLT 241 (340)
T ss_dssp HH-------HHHHHHHTEEEEEEEEE
T ss_pred Ch-------hHHHHHHHhcCCCEEEE
Confidence 32 22445589999998765
No 319
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=80.39 E-value=0.42 Score=43.18 Aligned_cols=89 Identities=12% Similarity=0.111 Sum_probs=55.3
Q ss_pred CCceeeccCcCCccccCC---CCCCCeEEEEeCCHHHHHhcCCC-CcEEEeccCCCCCCC-----CCCCCeeEEEecccc
Q 022305 138 YSEVFPPSNTPGVSHFPP---GYKQDRIVGMGMNEEELKRNPVL-TEYVVQDLNLNPKLP-----FEDNSFDVITNVVSV 208 (299)
Q Consensus 138 ~~~vLDiGcG~G~~~~~~---~~~~~~v~gvD~S~~ml~~a~~~-~~~~~~D~~~~~~lp-----f~~~~FD~Vis~~~l 208 (299)
-++||-.|++.|.+.... ...+.+|+++|.+++.++.+++. .+. ..|....+.+. ..++.+|+|+.+...
T Consensus 170 g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~~g~~~-~~d~~~~~~~~~~~~~~~~~~~D~vi~~~g~ 248 (347)
T 2hcy_A 170 GHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRSIGGEV-FIDFTKEKDIVGAVLKATDGGAHGVINVSVS 248 (347)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHTTCCE-EEETTTCSCHHHHHHHHHTSCEEEEEECSSC
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHHcCCce-EEecCccHhHHHHHHHHhCCCCCEEEECCCc
Confidence 467999998655533321 12467999999998877766543 222 23542111111 011269999977542
Q ss_pred cccCCHHHHHHHHHhhccCCcEEEE
Q 022305 209 DYLTKPIEVFKEMCQVLKPGGLAIV 233 (299)
Q Consensus 209 ~~~~d~~~~l~ei~rvLkpGG~lii 233 (299)
...++++.+.|++||.+++
T Consensus 249 ------~~~~~~~~~~l~~~G~iv~ 267 (347)
T 2hcy_A 249 ------EAAIEASTRYVRANGTTVL 267 (347)
T ss_dssp ------HHHHHHHTTSEEEEEEEEE
T ss_pred ------HHHHHHHHHHHhcCCEEEE
Confidence 3578899999999997765
No 320
>2km1_A Protein DRE2; yeast, antiapoptotic, protein binding; NMR {Saccharomyces cerevisiae}
Probab=80.36 E-value=1.2 Score=35.21 Aligned_cols=42 Identities=17% Similarity=0.373 Sum_probs=31.1
Q ss_pred CCCCCCCeeEEEecccc--cccCCHHHHHHHHHhhccCCcEEEE
Q 022305 192 LPFEDNSFDVITNVVSV--DYLTKPIEVFKEMCQVLKPGGLAIV 233 (299)
Q Consensus 192 lpf~~~~FD~Vis~~~l--~~~~d~~~~l~ei~rvLkpGG~lii 233 (299)
..+++++||.|+-..-- .+..=+.+++..+.+.|||||.|.-
T Consensus 53 VsLp~stYD~V~~lt~~~~~~~~l~r~li~~l~~aLkpgG~L~g 96 (136)
T 2km1_A 53 ITLENAKYETVHYLTPEAQTDIKFPKKLISVLADSLKPNGSLIG 96 (136)
T ss_dssp CCCCSSSCCSEEEECCCSSCSCCCCHHHHHHHHTTCCTTCCEEC
T ss_pred ccCCcccccEEEEecCCccchhhcCHHHHHHHHHHhCCCCEEEe
Confidence 34678999998854322 2233458999999999999998865
No 321
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=80.31 E-value=0.26 Score=44.64 Aligned_cols=52 Identities=13% Similarity=0.036 Sum_probs=40.1
Q ss_pred HHHHHHhhhcCCceeeccCcCCccccCCCCCCCeEEEEeCCH---HHHHhcCCCC
Q 022305 128 DPAIAALTKYYSEVFPPSNTPGVSHFPPGYKQDRIVGMGMNE---EELKRNPVLT 179 (299)
Q Consensus 128 ~~~~~~l~~~~~~vLDiGcG~G~~~~~~~~~~~~v~gvD~S~---~ml~~a~~~~ 179 (299)
+.++....+..+.|||.=||+|+........+.+.+|+|+++ ...+.+.+++
T Consensus 233 ~~~i~~~~~~~~~vlDpF~GsGtt~~aa~~~~r~~ig~e~~~~~~~~~~~~~~Rl 287 (319)
T 1eg2_A 233 ERLVRALSHPGSTVLDFFAGSGVTARVAIQEGRNSICTDAAPVFKEYYQKQLTFL 287 (319)
T ss_dssp HHHHHHHSCTTCEEEETTCTTCHHHHHHHHHTCEEEEEESSTHHHHHHHHHHHHC
T ss_pred HHHHHHhCCCCCEEEecCCCCCHHHHHHHHcCCcEEEEECCccHHHHHHHHHHHH
Confidence 344555555667899999999986666555578999999999 8888877654
No 322
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=79.99 E-value=0.78 Score=41.11 Aligned_cols=88 Identities=15% Similarity=0.119 Sum_probs=54.2
Q ss_pred CCceeeccCcCCccccC---CCCCCCeEEEEeCCHHHHHhcCCCCcEEEeccCCCCCCC------CCCCCeeEEEecccc
Q 022305 138 YSEVFPPSNTPGVSHFP---PGYKQDRIVGMGMNEEELKRNPVLTEYVVQDLNLNPKLP------FEDNSFDVITNVVSV 208 (299)
Q Consensus 138 ~~~vLDiGcG~G~~~~~---~~~~~~~v~gvD~S~~ml~~a~~~~~~~~~D~~~~~~lp------f~~~~FD~Vis~~~l 208 (299)
.++||-.|++.|.+... ....+++|+++|.+++-++.+++.---...|... +.+. .....+|+|+.+..-
T Consensus 149 g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~~~~~-~~~~~~~~~~~~~~g~D~vid~~g~ 227 (334)
T 3qwb_A 149 GDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKEYGAEYLINASK-EDILRQVLKFTNGKGVDASFDSVGK 227 (334)
T ss_dssp TCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTT-SCHHHHHHHHTTTSCEEEEEECCGG
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEEeCCC-chHHHHHHHHhCCCCceEEEECCCh
Confidence 35788888544443322 1224679999999998888776542112223210 1110 123469999976542
Q ss_pred cccCCHHHHHHHHHhhccCCcEEEE
Q 022305 209 DYLTKPIEVFKEMCQVLKPGGLAIV 233 (299)
Q Consensus 209 ~~~~d~~~~l~ei~rvLkpGG~lii 233 (299)
..++...+.|+|||.+++
T Consensus 228 -------~~~~~~~~~l~~~G~iv~ 245 (334)
T 3qwb_A 228 -------DTFEISLAALKRKGVFVS 245 (334)
T ss_dssp -------GGHHHHHHHEEEEEEEEE
T ss_pred -------HHHHHHHHHhccCCEEEE
Confidence 357788899999998766
No 323
>1ej6_A Lambda2; icosahedral, non-equivalence, dsRNA virus, methylase, methyltransferase, guanylyltransferase, zinc finger, icosahedral virus; 3.60A {Reovirus SP} SCOP: i.7.1.1 PDB: 2cse_U
Probab=79.80 E-value=2.7 Score=43.76 Aligned_cols=96 Identities=13% Similarity=0.093 Sum_probs=71.2
Q ss_pred cCCceeeccCcCCccccCCCCCCCeEEEEeCCHHHHH---hcCCCCcEEEeccCCCCCCCC-CCCCeeEEEeccccccc-
Q 022305 137 YYSEVFPPSNTPGVSHFPPGYKQDRIVGMGMNEEELK---RNPVLTEYVVQDLNLNPKLPF-EDNSFDVITNVVSVDYL- 211 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~~~~~~~~~~~v~gvD~S~~ml~---~a~~~~~~~~~D~~~~~~lpf-~~~~FD~Vis~~~l~~~- 211 (299)
....+||+|.|+-..-+...-+...|+.+|+-|-.-- .+.. ..|++.|. ..-.+ ....+|.|+|.++|---
T Consensus 821 ~~~~~lDlGTGPE~RiLsLiP~~~pvtm~D~RP~ae~~~~w~~~-T~f~~~Dy---L~~~~~~~~~~D~vt~i~SLGAA~ 896 (1289)
T 1ej6_A 821 DGDVVLDLGTGPEAKILELIPATSPVTCVDIRPTAQPSGCWNVR-TTFLELDY---LSDGWITGVRGDIVTCMLSLGAAA 896 (1289)
T ss_dssp TTCCEEEESCCSSCGGGGTSCTTSCEEEEESSCCCSCSTTBSSC-EEEEESCT---TSSSCGGGCCCSEEEECSCHHHHH
T ss_pred ccceEEEccCCCcceeeeecCCCCceEEecccCchhhhcccccc-ceeeEccc---cccceeecCCCcEEEEEeechhhh
Confidence 4578999999988777776667789999998874322 2222 78999997 32222 34579999999988754
Q ss_pred ----CCHHHHHHHHHhhccCCc--EEEEEec
Q 022305 212 ----TKPIEVFKEMCQVLKPGG--LAIVSFS 236 (299)
Q Consensus 212 ----~d~~~~l~ei~rvLkpGG--~lii~~~ 236 (299)
-+....++++.+.+++.| ++++...
T Consensus 897 A~a~~tl~~~~~q~l~~~~~~~~~~l~lQlN 927 (1289)
T 1ej6_A 897 AGKSMTFDAAFQQLIKVLSKSTANVVLVQVN 927 (1289)
T ss_dssp HHHTCCHHHHHHHHHHHHHTSCCSEEEEECC
T ss_pred hccCCcHHHHHHHHHHHHHhcCccEEEEEec
Confidence 378899999999998888 7777653
No 324
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=79.12 E-value=0.54 Score=42.70 Aligned_cols=87 Identities=18% Similarity=0.133 Sum_probs=54.3
Q ss_pred CCceeeccCcCCccccC---CCCCCCeEEEEeCCHHHHHhcCCC-CcEEEeccCCCCCCC------CCCCCeeEEEeccc
Q 022305 138 YSEVFPPSNTPGVSHFP---PGYKQDRIVGMGMNEEELKRNPVL-TEYVVQDLNLNPKLP------FEDNSFDVITNVVS 207 (299)
Q Consensus 138 ~~~vLDiGcG~G~~~~~---~~~~~~~v~gvD~S~~ml~~a~~~-~~~~~~D~~~~~~lp------f~~~~FD~Vis~~~ 207 (299)
.++||-.|++.|.+... ....+++|+++|.+++-++.+++. .+. ..|... +.+. .....+|+|+.+..
T Consensus 171 g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~-~~d~~~-~~~~~~~~~~~~~~~~D~vi~~~G 248 (351)
T 1yb5_A 171 GESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQNGAHE-VFNHRE-VNYIDKIKKYVGEKGIDIIIEMLA 248 (351)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSE-EEETTS-TTHHHHHHHHHCTTCEEEEEESCH
T ss_pred cCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHcCCCE-EEeCCC-chHHHHHHHHcCCCCcEEEEECCC
Confidence 35788899755543322 122467999999999888766543 222 234310 1110 11236999997754
Q ss_pred ccccCCHHHHHHHHHhhccCCcEEEE
Q 022305 208 VDYLTKPIEVFKEMCQVLKPGGLAIV 233 (299)
Q Consensus 208 l~~~~d~~~~l~ei~rvLkpGG~lii 233 (299)
- ..+.+..+.|+|||.+++
T Consensus 249 ~-------~~~~~~~~~l~~~G~iv~ 267 (351)
T 1yb5_A 249 N-------VNLSKDLSLLSHGGRVIV 267 (351)
T ss_dssp H-------HHHHHHHHHEEEEEEEEE
T ss_pred h-------HHHHHHHHhccCCCEEEE
Confidence 2 357788999999998765
No 325
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=79.10 E-value=1.3 Score=39.41 Aligned_cols=86 Identities=14% Similarity=0.150 Sum_probs=52.9
Q ss_pred ceeeccCcCCccccCC---CCCCCeEEEEeCCHHHHHhcCCC-CcEEEeccCCCCCC-CCCCCCeeEEEecccccccCCH
Q 022305 140 EVFPPSNTPGVSHFPP---GYKQDRIVGMGMNEEELKRNPVL-TEYVVQDLNLNPKL-PFEDNSFDVITNVVSVDYLTKP 214 (299)
Q Consensus 140 ~vLDiGcG~G~~~~~~---~~~~~~v~gvD~S~~ml~~a~~~-~~~~~~D~~~~~~l-pf~~~~FD~Vis~~~l~~~~d~ 214 (299)
+||=.|++.|.+.+.. ...+++|+++|.|++-++.+++. .+.+. |....... ....+.+|+|+-... .
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi-~~~~~~~~~~~~~~~~d~v~d~~g-----~- 221 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLKSLGANRIL-SRDEFAESRPLEKQLWAGAIDTVG-----D- 221 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHHHTCSEEE-EGGGSSCCCSSCCCCEEEEEESSC-----H-
T ss_pred eEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCEEE-ecCCHHHHHhhcCCCccEEEECCC-----c-
Confidence 5888887544433321 22467999999999888877653 22221 22000111 123457999886532 1
Q ss_pred HHHHHHHHhhccCCcEEEE
Q 022305 215 IEVFKEMCQVLKPGGLAIV 233 (299)
Q Consensus 215 ~~~l~ei~rvLkpGG~lii 233 (299)
..+++..+.|+|+|.++.
T Consensus 222 -~~~~~~~~~l~~~G~iv~ 239 (324)
T 3nx4_A 222 -KVLAKVLAQMNYGGCVAA 239 (324)
T ss_dssp -HHHHHHHHTEEEEEEEEE
T ss_pred -HHHHHHHHHHhcCCEEEE
Confidence 278999999999998765
No 326
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=78.31 E-value=0.91 Score=41.35 Aligned_cols=87 Identities=15% Similarity=0.080 Sum_probs=53.5
Q ss_pred CCceeeccCcCCccccCC---CCCCC-eEEEEeCCHHHHHhcCCC-CcEEEeccCCCCCC-----CCCCCCeeEEEeccc
Q 022305 138 YSEVFPPSNTPGVSHFPP---GYKQD-RIVGMGMNEEELKRNPVL-TEYVVQDLNLNPKL-----PFEDNSFDVITNVVS 207 (299)
Q Consensus 138 ~~~vLDiGcG~G~~~~~~---~~~~~-~v~gvD~S~~ml~~a~~~-~~~~~~D~~~~~~l-----pf~~~~FD~Vis~~~ 207 (299)
.++||-+|+| |.+.+.. ...++ +|+++|.+++-++.+++. .+.+. |... +++ ...++.||+|+-...
T Consensus 191 g~~VlV~GaG-~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi-~~~~-~~~~~~~~~~~~gg~D~vid~~g 267 (371)
T 1f8f_A 191 ASSFVTWGAG-AVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVI-NSKT-QDPVAAIKEITDGGVNFALESTG 267 (371)
T ss_dssp TCEEEEESCS-HHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCSEEE-ETTT-SCHHHHHHHHTTSCEEEEEECSC
T ss_pred CCEEEEECCC-HHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCCEEe-cCCc-cCHHHHHHHhcCCCCcEEEECCC
Confidence 4679999976 3322211 11345 799999999988887653 22222 2210 111 111236999986643
Q ss_pred ccccCCHHHHHHHHHhhccCCcEEEE
Q 022305 208 VDYLTKPIEVFKEMCQVLKPGGLAIV 233 (299)
Q Consensus 208 l~~~~d~~~~l~ei~rvLkpGG~lii 233 (299)
- ...+++..+.|+|||.+++
T Consensus 268 ~------~~~~~~~~~~l~~~G~iv~ 287 (371)
T 1f8f_A 268 S------PEILKQGVDALGILGKIAV 287 (371)
T ss_dssp C------HHHHHHHHHTEEEEEEEEE
T ss_pred C------HHHHHHHHHHHhcCCEEEE
Confidence 2 3567899999999998765
No 327
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=78.23 E-value=4.6 Score=35.89 Aligned_cols=40 Identities=23% Similarity=0.267 Sum_probs=27.1
Q ss_pred CCCeeEEEeccc----ccc-c--CCH----HHHHHHHHhhccCCcEEEEEe
Q 022305 196 DNSFDVITNVVS----VDY-L--TKP----IEVFKEMCQVLKPGGLAIVSF 235 (299)
Q Consensus 196 ~~~FD~Vis~~~----l~~-~--~d~----~~~l~ei~rvLkpGG~lii~~ 235 (299)
.+.+|+|+|... -|| - .|- .-++.-..++|||||.+++-.
T Consensus 204 ~~k~DvV~SDMApn~sGh~yqQC~DHarii~Lal~fA~~vLkPGGtfV~Kv 254 (320)
T 2hwk_A 204 VPKYDIIFVNVRTPYKYHHYQQCEDHAIKLSMLTKKACLHLNPGGTCVSIG 254 (320)
T ss_dssp SCCEEEEEEECCCCCCSCHHHHHHHHHHHHHHTHHHHGGGEEEEEEEEEEE
T ss_pred cCcCCEEEEcCCCCCCCccccccchHHHHHHHHHHHHHHhcCCCceEEEEE
Confidence 367999997643 334 1 222 225667889999999988864
No 328
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=77.95 E-value=0.71 Score=41.59 Aligned_cols=87 Identities=17% Similarity=0.247 Sum_probs=54.5
Q ss_pred CCceeeccCcCCccccCC---CCCCCeEEEEeCCHHHHHhcCCC-CcEEEeccCCCCCCC------CCCCCeeEEEeccc
Q 022305 138 YSEVFPPSNTPGVSHFPP---GYKQDRIVGMGMNEEELKRNPVL-TEYVVQDLNLNPKLP------FEDNSFDVITNVVS 207 (299)
Q Consensus 138 ~~~vLDiGcG~G~~~~~~---~~~~~~v~gvD~S~~ml~~a~~~-~~~~~~D~~~~~~lp------f~~~~FD~Vis~~~ 207 (299)
..+||-.|++.|.+.... ...+.+|+++|.+++-++.+++. .+. ..|... +++. .....+|+|+.+..
T Consensus 167 g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~ga~~-~~d~~~-~~~~~~~~~~~~~~~~d~vi~~~g 244 (343)
T 2eih_A 167 GDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKALGADE-TVNYTH-PDWPKEVRRLTGGKGADKVVDHTG 244 (343)
T ss_dssp TCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSE-EEETTS-TTHHHHHHHHTTTTCEEEEEESSC
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCCE-EEcCCc-ccHHHHHHHHhCCCCceEEEECCC
Confidence 357899998556533321 12467999999999888776542 222 234411 1110 11247999997764
Q ss_pred ccccCCHHHHHHHHHhhccCCcEEEE
Q 022305 208 VDYLTKPIEVFKEMCQVLKPGGLAIV 233 (299)
Q Consensus 208 l~~~~d~~~~l~ei~rvLkpGG~lii 233 (299)
. ..++++.+.|+++|.+++
T Consensus 245 -~------~~~~~~~~~l~~~G~~v~ 263 (343)
T 2eih_A 245 -A------LYFEGVIKATANGGRIAI 263 (343)
T ss_dssp -S------SSHHHHHHHEEEEEEEEE
T ss_pred -H------HHHHHHHHhhccCCEEEE
Confidence 2 246788899999997765
No 329
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=76.82 E-value=1.3 Score=39.88 Aligned_cols=86 Identities=14% Similarity=0.113 Sum_probs=54.7
Q ss_pred cCCceeeccCcCCccccCC---CCCCCeEEEEeCCHHHHHhcCCC-CcEEEeccCCCCCCCCC------CCCeeEEEecc
Q 022305 137 YYSEVFPPSNTPGVSHFPP---GYKQDRIVGMGMNEEELKRNPVL-TEYVVQDLNLNPKLPFE------DNSFDVITNVV 206 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~~~~~---~~~~~~v~gvD~S~~ml~~a~~~-~~~~~~D~~~~~~lpf~------~~~FD~Vis~~ 206 (299)
...+||-.|+| |.+.... ...+.+|+++|.+++-++.+++. .+. ..|. .+..+. .+.+|+|+...
T Consensus 164 ~g~~VlV~GaG-~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~-~~d~---~~~~~~~~~~~~~~~~d~vid~~ 238 (339)
T 1rjw_A 164 PGEWVAIYGIG-GLGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGADL-VVNP---LKEDAAKFMKEKVGGVHAAVVTA 238 (339)
T ss_dssp TTCEEEEECCS-TTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSE-EECT---TTSCHHHHHHHHHSSEEEEEESS
T ss_pred CCCEEEEECCC-HHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHCCCCE-EecC---CCccHHHHHHHHhCCCCEEEECC
Confidence 34679999985 4433321 12467999999999888876653 222 2343 111110 04699998764
Q ss_pred cccccCCHHHHHHHHHhhccCCcEEEE
Q 022305 207 SVDYLTKPIEVFKEMCQVLKPGGLAIV 233 (299)
Q Consensus 207 ~l~~~~d~~~~l~ei~rvLkpGG~lii 233 (299)
.. ...+++..+.|++||.+++
T Consensus 239 g~------~~~~~~~~~~l~~~G~~v~ 259 (339)
T 1rjw_A 239 VS------KPAFQSAYNSIRRGGACVL 259 (339)
T ss_dssp CC------HHHHHHHHHHEEEEEEEEE
T ss_pred CC------HHHHHHHHHHhhcCCEEEE
Confidence 32 3567889999999997765
No 330
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=76.77 E-value=0.9 Score=40.81 Aligned_cols=89 Identities=12% Similarity=0.101 Sum_probs=54.8
Q ss_pred cCCceeeccCcCCccccC---CCCCCCeEEEEeCCHHHHHhcCCC-CcEEEeccCCCCCCC----CCCCCeeEEEecccc
Q 022305 137 YYSEVFPPSNTPGVSHFP---PGYKQDRIVGMGMNEEELKRNPVL-TEYVVQDLNLNPKLP----FEDNSFDVITNVVSV 208 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~~~~---~~~~~~~v~gvD~S~~ml~~a~~~-~~~~~~D~~~~~~lp----f~~~~FD~Vis~~~l 208 (299)
.-++||-.|+| |.+.+. ....+.+|+++|.+++-++.+++. .+.+ .|... +.+. -..+.+|+|+-...
T Consensus 166 ~g~~VlV~GaG-~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~-i~~~~-~~~~~~~~~~~g~~d~vid~~g- 241 (340)
T 3s2e_A 166 PGQWVVISGIG-GLGHVAVQYARAMGLRVAAVDIDDAKLNLARRLGAEVA-VNARD-TDPAAWLQKEIGGAHGVLVTAV- 241 (340)
T ss_dssp TTSEEEEECCS-TTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEE-EETTT-SCHHHHHHHHHSSEEEEEESSC-
T ss_pred CCCEEEEECCC-HHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCEE-EeCCC-cCHHHHHHHhCCCCCEEEEeCC-
Confidence 34678888885 333322 122467999999999998887764 2222 23210 1110 01136898886532
Q ss_pred cccCCHHHHHHHHHhhccCCcEEEEE
Q 022305 209 DYLTKPIEVFKEMCQVLKPGGLAIVS 234 (299)
Q Consensus 209 ~~~~d~~~~l~ei~rvLkpGG~lii~ 234 (299)
-...+++..+.|+|||.+++.
T Consensus 242 -----~~~~~~~~~~~l~~~G~iv~~ 262 (340)
T 3s2e_A 242 -----SPKAFSQAIGMVRRGGTIALN 262 (340)
T ss_dssp -----CHHHHHHHHHHEEEEEEEEEC
T ss_pred -----CHHHHHHHHHHhccCCEEEEe
Confidence 245788999999999987763
No 331
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=76.67 E-value=1.3 Score=40.31 Aligned_cols=88 Identities=16% Similarity=0.148 Sum_probs=54.2
Q ss_pred cCCceeeccCcCCccccCC---CCCCCeEEEEeCCHHHHHhcCCC-CcEEEeccCCCCCCC-----CCCCCeeEEEeccc
Q 022305 137 YYSEVFPPSNTPGVSHFPP---GYKQDRIVGMGMNEEELKRNPVL-TEYVVQDLNLNPKLP-----FEDNSFDVITNVVS 207 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~~~~~---~~~~~~v~gvD~S~~ml~~a~~~-~~~~~~D~~~~~~lp-----f~~~~FD~Vis~~~ 207 (299)
...+||-.|++.|.+.... ...+++|+++|.+++-++.+++. .+.+ .|... +.+. ...+.+|+|+.+..
T Consensus 163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~-~~~~~-~~~~~~~~~~~~~g~D~vid~~g 240 (362)
T 2c0c_A 163 EGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKSLGCDRP-INYKT-EPVGTVLKQEYPEGVDVVYESVG 240 (362)
T ss_dssp TTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEE-EETTT-SCHHHHHHHHCTTCEEEEEECSC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCCcEE-EecCC-hhHHHHHHHhcCCCCCEEEECCC
Confidence 3467999995444433221 12467999999999887776553 2222 23210 1110 11246999997654
Q ss_pred ccccCCHHHHHHHHHhhccCCcEEEE
Q 022305 208 VDYLTKPIEVFKEMCQVLKPGGLAIV 233 (299)
Q Consensus 208 l~~~~d~~~~l~ei~rvLkpGG~lii 233 (299)
- ..++++.+.|+++|.+++
T Consensus 241 ~-------~~~~~~~~~l~~~G~iv~ 259 (362)
T 2c0c_A 241 G-------AMFDLAVDALATKGRLIV 259 (362)
T ss_dssp T-------HHHHHHHHHEEEEEEEEE
T ss_pred H-------HHHHHHHHHHhcCCEEEE
Confidence 2 478889999999997765
No 332
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=76.44 E-value=2.5 Score=38.20 Aligned_cols=83 Identities=20% Similarity=0.276 Sum_probs=53.2
Q ss_pred CceeeccCcCCccccC----C-CCCCCe-EEEEeCCHH---HHHhcCCC-CcEEEeccCCCCCCCCC-----CCCeeEEE
Q 022305 139 SEVFPPSNTPGVSHFP----P-GYKQDR-IVGMGMNEE---ELKRNPVL-TEYVVQDLNLNPKLPFE-----DNSFDVIT 203 (299)
Q Consensus 139 ~~vLDiGcG~G~~~~~----~-~~~~~~-v~gvD~S~~---ml~~a~~~-~~~~~~D~~~~~~lpf~-----~~~FD~Vi 203 (299)
.+||-.|+| |.+.+. . ...+.+ |+++|.+++ -++.+++. .+.+ |. ..-.+. .+.||+|+
T Consensus 174 ~~VlV~GaG-~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~lGa~~v--~~---~~~~~~~i~~~~gg~Dvvi 247 (357)
T 2b5w_A 174 SSAFVLGNG-SLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEELDATYV--DS---RQTPVEDVPDVYEQMDFIY 247 (357)
T ss_dssp CEEEEECCS-HHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHHTTCEEE--ET---TTSCGGGHHHHSCCEEEEE
T ss_pred CEEEEECCC-HHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHHcCCccc--CC---CccCHHHHHHhCCCCCEEE
Confidence 689999984 444433 1 234666 999999987 77766653 3333 44 211111 23799998
Q ss_pred ecccccccCCHHHHHHHHHhhccCCcEEEE
Q 022305 204 NVVSVDYLTKPIEVFKEMCQVLKPGGLAIV 233 (299)
Q Consensus 204 s~~~l~~~~d~~~~l~ei~rvLkpGG~lii 233 (299)
-...- ...+++..+.|+|||.+++
T Consensus 248 d~~g~------~~~~~~~~~~l~~~G~iv~ 271 (357)
T 2b5w_A 248 EATGF------PKHAIQSVQALAPNGVGAL 271 (357)
T ss_dssp ECSCC------HHHHHHHHHHEEEEEEEEE
T ss_pred ECCCC------hHHHHHHHHHHhcCCEEEE
Confidence 65432 2467889999999997765
No 333
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=76.25 E-value=1.1 Score=38.89 Aligned_cols=22 Identities=9% Similarity=0.048 Sum_probs=18.9
Q ss_pred HHHHHHHHHhhccCCcEEEEEe
Q 022305 214 PIEVFKEMCQVLKPGGLAIVSF 235 (299)
Q Consensus 214 ~~~~l~ei~rvLkpGG~lii~~ 235 (299)
....|+++.|+|||||.+++..
T Consensus 53 ~~~~l~~~~~~Lk~~g~i~v~~ 74 (260)
T 1g60_A 53 TYRWIDKVLDKLDKDGSLYIFN 74 (260)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHHHHhcCCeEEEEEc
Confidence 4678899999999999988874
No 334
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=74.78 E-value=0.92 Score=40.61 Aligned_cols=87 Identities=14% Similarity=0.216 Sum_probs=53.4
Q ss_pred CCceeeccCcCCccccCC---CCCCCeEEEEeCCHHHHHhcCCC-CcEEEeccCCCCCCC------CCCCCeeEEEeccc
Q 022305 138 YSEVFPPSNTPGVSHFPP---GYKQDRIVGMGMNEEELKRNPVL-TEYVVQDLNLNPKLP------FEDNSFDVITNVVS 207 (299)
Q Consensus 138 ~~~vLDiGcG~G~~~~~~---~~~~~~v~gvD~S~~ml~~a~~~-~~~~~~D~~~~~~lp------f~~~~FD~Vis~~~ 207 (299)
..++|-.|++.|.+.... ...+++|+++|.+++-++.+++. .+. ..|... +... .....+|+|+.+..
T Consensus 146 g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~g~~~-~~d~~~-~~~~~~i~~~~~~~~~d~vi~~~g 223 (333)
T 1wly_A 146 GDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARKLGCHH-TINYST-QDFAEVVREITGGKGVDVVYDSIG 223 (333)
T ss_dssp TCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSE-EEETTT-SCHHHHHHHHHTTCCEEEEEECSC
T ss_pred CCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCE-EEECCC-HHHHHHHHHHhCCCCCeEEEECCc
Confidence 357888887555533321 12467999999999877766542 222 234310 1110 11246999997654
Q ss_pred ccccCCHHHHHHHHHhhccCCcEEEE
Q 022305 208 VDYLTKPIEVFKEMCQVLKPGGLAIV 233 (299)
Q Consensus 208 l~~~~d~~~~l~ei~rvLkpGG~lii 233 (299)
- ..+++..+.|++||.+++
T Consensus 224 ~-------~~~~~~~~~l~~~G~iv~ 242 (333)
T 1wly_A 224 K-------DTLQKSLDCLRPRGMCAA 242 (333)
T ss_dssp T-------TTHHHHHHTEEEEEEEEE
T ss_pred H-------HHHHHHHHhhccCCEEEE
Confidence 2 357888999999997765
No 335
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=74.47 E-value=1.8 Score=39.14 Aligned_cols=87 Identities=9% Similarity=0.063 Sum_probs=52.9
Q ss_pred CCceeeccCcCCccccC---CCCCCCeEEEEeCCHHHHHhcCCC-CcEEEeccCCCCCC-----C-CCCCCeeEEEeccc
Q 022305 138 YSEVFPPSNTPGVSHFP---PGYKQDRIVGMGMNEEELKRNPVL-TEYVVQDLNLNPKL-----P-FEDNSFDVITNVVS 207 (299)
Q Consensus 138 ~~~vLDiGcG~G~~~~~---~~~~~~~v~gvD~S~~ml~~a~~~-~~~~~~D~~~~~~l-----p-f~~~~FD~Vis~~~ 207 (299)
..+||-.|++.|.+... ....+++|+++|.+++-++.+++. .+. ..|... ... . .....+|+|+.+..
T Consensus 163 g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~g~~~-~~~~~~-~~~~~~~~~~~~~~~~d~vi~~~G 240 (354)
T 2j8z_A 163 GDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEKLGAAA-GFNYKK-EDFSEATLKFTKGAGVNLILDCIG 240 (354)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTCSE-EEETTT-SCHHHHHHHHTTTSCEEEEEESSC
T ss_pred CCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcE-EEecCC-hHHHHHHHHHhcCCCceEEEECCC
Confidence 35788888544543322 112467999999999888776442 222 233310 111 0 12246999997754
Q ss_pred ccccCCHHHHHHHHHhhccCCcEEEE
Q 022305 208 VDYLTKPIEVFKEMCQVLKPGGLAIV 233 (299)
Q Consensus 208 l~~~~d~~~~l~ei~rvLkpGG~lii 233 (299)
-. .+.+..++|++||.+++
T Consensus 241 ~~-------~~~~~~~~l~~~G~iv~ 259 (354)
T 2j8z_A 241 GS-------YWEKNVNCLALDGRWVL 259 (354)
T ss_dssp GG-------GHHHHHHHEEEEEEEEE
T ss_pred ch-------HHHHHHHhccCCCEEEE
Confidence 32 46788899999998765
No 336
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=74.07 E-value=1 Score=40.72 Aligned_cols=86 Identities=10% Similarity=0.064 Sum_probs=54.1
Q ss_pred CceeeccCcCCccccCC---CCCCC-eEEEEeCCHHHHHhcCC-C-CcEEEeccCCCCCC-----CCCCCCeeEEEeccc
Q 022305 139 SEVFPPSNTPGVSHFPP---GYKQD-RIVGMGMNEEELKRNPV-L-TEYVVQDLNLNPKL-----PFEDNSFDVITNVVS 207 (299)
Q Consensus 139 ~~vLDiGcG~G~~~~~~---~~~~~-~v~gvD~S~~ml~~a~~-~-~~~~~~D~~~~~~l-----pf~~~~FD~Vis~~~ 207 (299)
.+||-.|++.|.+.... ...++ +|+++|.+++-++.+++ . .+. ..|... +.+ ....+.+|+|+.+..
T Consensus 162 ~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~g~~~-~~d~~~-~~~~~~~~~~~~~~~d~vi~~~G 239 (357)
T 2zb4_A 162 KTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFDA-AINYKK-DNVAEQLRESCPAGVDVYFDNVG 239 (357)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCCSE-EEETTT-SCHHHHHHHHCTTCEEEEEESCC
T ss_pred cEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCce-EEecCc-hHHHHHHHHhcCCCCCEEEECCC
Confidence 67899998555533321 12466 99999999887766543 2 222 234411 111 011226999997754
Q ss_pred ccccCCHHHHHHHHHhhccCCcEEEE
Q 022305 208 VDYLTKPIEVFKEMCQVLKPGGLAIV 233 (299)
Q Consensus 208 l~~~~d~~~~l~ei~rvLkpGG~lii 233 (299)
...+++..+.|++||.+++
T Consensus 240 -------~~~~~~~~~~l~~~G~iv~ 258 (357)
T 2zb4_A 240 -------GNISDTVISQMNENSHIIL 258 (357)
T ss_dssp -------HHHHHHHHHTEEEEEEEEE
T ss_pred -------HHHHHHHHHHhccCcEEEE
Confidence 2578899999999998765
No 337
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=73.16 E-value=1.3 Score=40.79 Aligned_cols=64 Identities=13% Similarity=0.074 Sum_probs=44.3
Q ss_pred CceeeccCcCCccccCCCCCCC-eEEEEeCCHHHHHhcCC---CCcEEEeccCCCCCCCC--------CCCCeeEEEec
Q 022305 139 SEVFPPSNTPGVSHFPPGYKQD-RIVGMGMNEEELKRNPV---LTEYVVQDLNLNPKLPF--------EDNSFDVITNV 205 (299)
Q Consensus 139 ~~vLDiGcG~G~~~~~~~~~~~-~v~gvD~S~~ml~~a~~---~~~~~~~D~~~~~~lpf--------~~~~FD~Vis~ 205 (299)
.+++|+-||+|...+.....+. .+.++|+++.+++..+. ...++.+|+ .++.. ....+|+|+..
T Consensus 3 ~~vidLFsG~GGlslG~~~aG~~~v~avE~d~~a~~t~~~N~~~~~~~~~DI---~~~~~~~~~~~~~~~~~~D~i~gg 78 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAGFDVKMAVEIDQHAINTHAINFPRSLHVQEDV---SLLNAEIIKGFFKNDMPIDGIIGG 78 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHTCEEEEEECSCHHHHHHHHHHCTTSEEECCCG---GGCCHHHHHHHHCSCCCCCEEEEC
T ss_pred CeEEEEccCcCHHHHHHHHCCCcEEEEEeCCHHHHHHHHHhCCCCceEecCh---hhcCHHHHHhhcccCCCeeEEEec
Confidence 4799999999874444333344 46699999999875443 356788888 44421 34679999955
No 338
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=73.15 E-value=0.91 Score=40.48 Aligned_cols=87 Identities=11% Similarity=0.103 Sum_probs=53.2
Q ss_pred CCceeeccCcCCccccCC---CCCCCeEEEEeCCHHHHHhcCCC-CcEEEeccCCCCCCC------CCCCCeeEEEeccc
Q 022305 138 YSEVFPPSNTPGVSHFPP---GYKQDRIVGMGMNEEELKRNPVL-TEYVVQDLNLNPKLP------FEDNSFDVITNVVS 207 (299)
Q Consensus 138 ~~~vLDiGcG~G~~~~~~---~~~~~~v~gvD~S~~ml~~a~~~-~~~~~~D~~~~~~lp------f~~~~FD~Vis~~~ 207 (299)
.++||-.|++.|.+.... ...+++|+++|.+++.++.+++. .+. ..|... ++.. .....+|+|+.+..
T Consensus 141 g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~g~~~-~~~~~~-~~~~~~~~~~~~~~~~D~vi~~~g 218 (327)
T 1qor_A 141 DEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKAGAWQ-VINYRE-EDLVERLKEITGGKKVRVVYDSVG 218 (327)
T ss_dssp TCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCSE-EEETTT-SCHHHHHHHHTTTCCEEEEEECSC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCE-EEECCC-ccHHHHHHHHhCCCCceEEEECCc
Confidence 357888885445433221 12367999999999877766542 222 234311 1110 11346999997754
Q ss_pred ccccCCHHHHHHHHHhhccCCcEEEE
Q 022305 208 VDYLTKPIEVFKEMCQVLKPGGLAIV 233 (299)
Q Consensus 208 l~~~~d~~~~l~ei~rvLkpGG~lii 233 (299)
...+++..+.|++||.+++
T Consensus 219 -------~~~~~~~~~~l~~~G~iv~ 237 (327)
T 1qor_A 219 -------RDTWERSLDCLQRRGLMVS 237 (327)
T ss_dssp -------GGGHHHHHHTEEEEEEEEE
T ss_pred -------hHHHHHHHHHhcCCCEEEE
Confidence 2457888999999998765
No 339
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=72.81 E-value=1.8 Score=38.40 Aligned_cols=96 Identities=15% Similarity=-0.059 Sum_probs=62.1
Q ss_pred CceeeccCcCCccccCCCCCCCeEEEEeCCHHHHHhcCCC------CcEEEeccCCCCCCC---CCCCCeeEEEeccccc
Q 022305 139 SEVFPPSNTPGVSHFPPGYKQDRIVGMGMNEEELKRNPVL------TEYVVQDLNLNPKLP---FEDNSFDVITNVVSVD 209 (299)
Q Consensus 139 ~~vLDiGcG~G~~~~~~~~~~~~v~gvD~S~~ml~~a~~~------~~~~~~D~~~~~~lp---f~~~~FD~Vis~~~l~ 209 (299)
..+||+=+|+|...+...-.+.+++.+|.++..++.-+++ ++++..|.. ..+. -+...||+|+.-=-.+
T Consensus 93 ~~~LDlfaGSGaLgiEaLS~~d~~vfvE~~~~a~~~L~~Nl~~~~~~~V~~~D~~--~~L~~l~~~~~~fdLVfiDPPYe 170 (283)
T 2oo3_A 93 NSTLSYYPGSPYFAINQLRSQDRLYLCELHPTEYNFLLKLPHFNKKVYVNHTDGV--SKLNALLPPPEKRGLIFIDPSYE 170 (283)
T ss_dssp SSSCCEEECHHHHHHHHSCTTSEEEEECCSHHHHHHHTTSCCTTSCEEEECSCHH--HHHHHHCSCTTSCEEEEECCCCC
T ss_pred CCceeEeCCcHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHhCcCCcEEEEeCcHH--HHHHHhcCCCCCccEEEECCCCC
Confidence 5789999998863332222568999999999998765543 556666741 1121 2235699999864444
Q ss_pred ccCCHHHHHHHHHh--hccCCcEEEEEec
Q 022305 210 YLTKPIEVFKEMCQ--VLKPGGLAIVSFS 236 (299)
Q Consensus 210 ~~~d~~~~l~ei~r--vLkpGG~lii~~~ 236 (299)
.-.+..++++.+.+ .+.|+|.+++=+|
T Consensus 171 ~k~~~~~vl~~L~~~~~r~~~Gi~v~WYP 199 (283)
T 2oo3_A 171 RKEEYKEIPYAIKNAYSKFSTGLYCVWYP 199 (283)
T ss_dssp STTHHHHHHHHHHHHHHHCTTSEEEEEEE
T ss_pred CCcHHHHHHHHHHHhCccCCCeEEEEEEe
Confidence 33456666666655 5578998888433
No 340
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=72.53 E-value=2.1 Score=38.97 Aligned_cols=89 Identities=11% Similarity=0.079 Sum_probs=54.8
Q ss_pred cCCceeeccCcCCccccCC---CCCCC-eEEEEeCCHHHHHhcCCC-CcEEEeccCCCCCC--------CCCCCCeeEEE
Q 022305 137 YYSEVFPPSNTPGVSHFPP---GYKQD-RIVGMGMNEEELKRNPVL-TEYVVQDLNLNPKL--------PFEDNSFDVIT 203 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~~~~~---~~~~~-~v~gvD~S~~ml~~a~~~-~~~~~~D~~~~~~l--------pf~~~~FD~Vi 203 (299)
...+||-.|+| |.+.+.. ...++ +|+++|.+++-++.+++. .+.. .|... +++ ....+.+|+|+
T Consensus 182 ~g~~VlV~GaG-~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~v-i~~~~-~~~~~~i~~~~~~~~gg~Dvvi 258 (370)
T 4ej6_A 182 AGSTVAILGGG-VIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATAT-VDPSA-GDVVEAIAGPVGLVPGGVDVVI 258 (370)
T ss_dssp TTCEEEEECCS-HHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEE-ECTTS-SCHHHHHHSTTSSSTTCEEEEE
T ss_pred CCCEEEEECCC-HHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEE-ECCCC-cCHHHHHHhhhhccCCCCCEEE
Confidence 34678888875 3333221 12355 899999999988877653 2222 22210 111 02234799999
Q ss_pred ecccccccCCHHHHHHHHHhhccCCcEEEEE
Q 022305 204 NVVSVDYLTKPIEVFKEMCQVLKPGGLAIVS 234 (299)
Q Consensus 204 s~~~l~~~~d~~~~l~ei~rvLkpGG~lii~ 234 (299)
-... -...+++..+.|++||.+++.
T Consensus 259 d~~G------~~~~~~~~~~~l~~~G~vv~~ 283 (370)
T 4ej6_A 259 ECAG------VAETVKQSTRLAKAGGTVVIL 283 (370)
T ss_dssp ECSC------CHHHHHHHHHHEEEEEEEEEC
T ss_pred ECCC------CHHHHHHHHHHhccCCEEEEE
Confidence 6532 135788999999999987763
No 341
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=72.32 E-value=0.77 Score=41.02 Aligned_cols=88 Identities=13% Similarity=0.151 Sum_probs=53.7
Q ss_pred CCceeeccCcCCccccC---CCCCCCeEEEEeCCHHHHHhcCCC-CcEEEeccCCCCCCC------CCCCCeeEEEeccc
Q 022305 138 YSEVFPPSNTPGVSHFP---PGYKQDRIVGMGMNEEELKRNPVL-TEYVVQDLNLNPKLP------FEDNSFDVITNVVS 207 (299)
Q Consensus 138 ~~~vLDiGcG~G~~~~~---~~~~~~~v~gvD~S~~ml~~a~~~-~~~~~~D~~~~~~lp------f~~~~FD~Vis~~~ 207 (299)
.++||-.|++.|.+... ....+++|+++|.+++-++.+++. .+. ..|... +.+. .....+|+|+.+..
T Consensus 141 g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~-~~~~~~-~~~~~~~~~~~~~~g~Dvvid~~g 218 (325)
T 3jyn_A 141 GEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKALGAWE-TIDYSH-EDVAKRVLELTDGKKCPVVYDGVG 218 (325)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCSE-EEETTT-SCHHHHHHHHTTTCCEEEEEESSC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCE-EEeCCC-ccHHHHHHHHhCCCCceEEEECCC
Confidence 35788888443443322 122467999999999888877653 222 223210 1110 12347999997654
Q ss_pred ccccCCHHHHHHHHHhhccCCcEEEEE
Q 022305 208 VDYLTKPIEVFKEMCQVLKPGGLAIVS 234 (299)
Q Consensus 208 l~~~~d~~~~l~ei~rvLkpGG~lii~ 234 (299)
- ..+.+..+.|++||.+++-
T Consensus 219 ~-------~~~~~~~~~l~~~G~iv~~ 238 (325)
T 3jyn_A 219 Q-------DTWLTSLDSVAPRGLVVSF 238 (325)
T ss_dssp G-------GGHHHHHTTEEEEEEEEEC
T ss_pred h-------HHHHHHHHHhcCCCEEEEE
Confidence 2 3567889999999987763
No 342
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=72.05 E-value=0.82 Score=41.43 Aligned_cols=87 Identities=10% Similarity=0.099 Sum_probs=52.6
Q ss_pred CCceeeccCcCCccccC---CCCCCCeEEEEeCCHHHHHhcCCC-CcEEEeccCCCCCCC-----CCCCCeeEEEecccc
Q 022305 138 YSEVFPPSNTPGVSHFP---PGYKQDRIVGMGMNEEELKRNPVL-TEYVVQDLNLNPKLP-----FEDNSFDVITNVVSV 208 (299)
Q Consensus 138 ~~~vLDiGcG~G~~~~~---~~~~~~~v~gvD~S~~ml~~a~~~-~~~~~~D~~~~~~lp-----f~~~~FD~Vis~~~l 208 (299)
.++||-.|++.|.+... ....+++|+++|.+++-++.+++. .+. ..|... +.+. ...+.+|+|+.+..-
T Consensus 168 g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~-~~~~~~-~~~~~~~~~~~~~g~Dvvid~~g~ 245 (353)
T 4dup_A 168 GESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACERLGAKR-GINYRS-EDFAAVIKAETGQGVDIILDMIGA 245 (353)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSE-EEETTT-SCHHHHHHHHHSSCEEEEEESCCG
T ss_pred CCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCE-EEeCCc-hHHHHHHHHHhCCCceEEEECCCH
Confidence 35788886444442221 122467999999999888877653 222 223210 1110 013469999976543
Q ss_pred cccCCHHHHHHHHHhhccCCcEEEE
Q 022305 209 DYLTKPIEVFKEMCQVLKPGGLAIV 233 (299)
Q Consensus 209 ~~~~d~~~~l~ei~rvLkpGG~lii 233 (299)
. .+.+..+.|++||.+++
T Consensus 246 ~-------~~~~~~~~l~~~G~iv~ 263 (353)
T 4dup_A 246 A-------YFERNIASLAKDGCLSI 263 (353)
T ss_dssp G-------GHHHHHHTEEEEEEEEE
T ss_pred H-------HHHHHHHHhccCCEEEE
Confidence 2 56788899999998765
No 343
>3iyl_W VP1; non-enveloped virus, membrane penetration protein, autocleav myristol group, icosahedral virus; HET: MYR; 3.30A {Grass carp reovirus} PDB: 3k1q_A
Probab=71.72 E-value=6.4 Score=41.26 Aligned_cols=95 Identities=14% Similarity=0.154 Sum_probs=72.0
Q ss_pred CceeeccCcCCccccCCCCCCCeEEEEeCCHHHH---HhcCCCCcEEEeccCCCCCCCC-CCCCeeEEEeccccccc---
Q 022305 139 SEVFPPSNTPGVSHFPPGYKQDRIVGMGMNEEEL---KRNPVLTEYVVQDLNLNPKLPF-EDNSFDVITNVVSVDYL--- 211 (299)
Q Consensus 139 ~~vLDiGcG~G~~~~~~~~~~~~v~gvD~S~~ml---~~a~~~~~~~~~D~~~~~~lpf-~~~~FD~Vis~~~l~~~--- 211 (299)
..+||+|.|+-...+...-+...|+.+|+-|-.. .......+|++.|. ....+ ....+|++.|.++|---
T Consensus 829 ~~~lDLGTGPEcRiLsliP~~~pvtmvD~RP~ae~~~~w~~~~T~yi~~DY---l~~~~~~~~~~d~vtailSLGAA~a~ 905 (1299)
T 3iyl_W 829 AHLLDLGTGPECRILSLIPPTLQVTMSDSRPCAELMASFDPALTAYVQGDY---STAAFWNGIRCDSATAIFTIGAAAAA 905 (1299)
T ss_dssp CSEEEETCCSSCSGGGSSCTTSCEEEEESSCCSSCGGGBCTTTEEEEESCS---SSGGGGSSCCCSEEEETTTHHHHHHH
T ss_pred CEEEEcCCCccceeeecCCCCCceEEEecCCccccccccccccceeEEecc---ccceeEecCCCCEEEEeeechhhhhh
Confidence 7899999998877777776788999999876432 23333378999997 33332 35679999999888644
Q ss_pred --CCHHHHHHHHHhhccCCc--EEEEEec
Q 022305 212 --TKPIEVFKEMCQVLKPGG--LAIVSFS 236 (299)
Q Consensus 212 --~d~~~~l~ei~rvLkpGG--~lii~~~ 236 (299)
-+....++++.+.+++.| ++++...
T Consensus 906 a~~tl~~~l~~~l~~~~~~~v~~l~lQLN 934 (1299)
T 3iyl_W 906 AGTDLIAFVQQLIPRIVAAGGTRMWLQLN 934 (1299)
T ss_dssp TTCCHHHHHHHHHHHHHHTTCSEEEECCC
T ss_pred CCCcHHHHHHHHHHHHHhcCceEEEEEec
Confidence 378899999999999988 7777643
No 344
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=71.41 E-value=1.9 Score=38.86 Aligned_cols=87 Identities=10% Similarity=0.077 Sum_probs=53.2
Q ss_pred CCceeeccCcCCccccCC---CCCCC-eEEEEeCCHHHHHhcCCC-CcEEEeccCCCCCCC------CCCCCeeEEEecc
Q 022305 138 YSEVFPPSNTPGVSHFPP---GYKQD-RIVGMGMNEEELKRNPVL-TEYVVQDLNLNPKLP------FEDNSFDVITNVV 206 (299)
Q Consensus 138 ~~~vLDiGcG~G~~~~~~---~~~~~-~v~gvD~S~~ml~~a~~~-~~~~~~D~~~~~~lp------f~~~~FD~Vis~~ 206 (299)
.++||-.|+| |.+.+.. ...++ +|+++|.+++-++.+++. .+.+ .|... +++. .....+|+|+...
T Consensus 168 g~~VlV~GaG-~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~Ga~~~-~~~~~-~~~~~~v~~~~~g~g~D~vid~~ 244 (348)
T 2d8a_A 168 GKSVLITGAG-PLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYV-INPFE-EDVVKEVMDITDGNGVDVFLEFS 244 (348)
T ss_dssp TCCEEEECCS-HHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHTCSEE-ECTTT-SCHHHHHHHHTTTSCEEEEEECS
T ss_pred CCEEEEECCC-HHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEE-ECCCC-cCHHHHHHHHcCCCCCCEEEECC
Confidence 3578888884 4333211 12356 899999999888776542 2222 23210 1110 1123699999764
Q ss_pred cccccCCHHHHHHHHHhhccCCcEEEE
Q 022305 207 SVDYLTKPIEVFKEMCQVLKPGGLAIV 233 (299)
Q Consensus 207 ~l~~~~d~~~~l~ei~rvLkpGG~lii 233 (299)
.. ...+++..+.|++||.+++
T Consensus 245 g~------~~~~~~~~~~l~~~G~iv~ 265 (348)
T 2d8a_A 245 GA------PKALEQGLQAVTPAGRVSL 265 (348)
T ss_dssp CC------HHHHHHHHHHEEEEEEEEE
T ss_pred CC------HHHHHHHHHHHhcCCEEEE
Confidence 42 3567889999999997765
No 345
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=71.29 E-value=2.6 Score=37.90 Aligned_cols=89 Identities=7% Similarity=-0.000 Sum_probs=54.2
Q ss_pred cCCceeeccCcCCccccCC---CCCCCeEEEEeCCHHHHHhcCCC-CcEEEeccCCCCCCC------CC---CCCeeEEE
Q 022305 137 YYSEVFPPSNTPGVSHFPP---GYKQDRIVGMGMNEEELKRNPVL-TEYVVQDLNLNPKLP------FE---DNSFDVIT 203 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~~~~~---~~~~~~v~gvD~S~~ml~~a~~~-~~~~~~D~~~~~~lp------f~---~~~FD~Vi 203 (299)
..++||-.|+| |.+.+.. ...+++|+++|.+++-++.+++. .+. ..|.....++. .. .+.+|+|+
T Consensus 168 ~g~~VlV~GaG-~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~-~~~~~~~~~~~~~i~~~~~~~~g~g~D~vi 245 (352)
T 1e3j_A 168 LGTTVLVIGAG-PIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCGADV-TLVVDPAKEEESSIIERIRSAIGDLPNVTI 245 (352)
T ss_dssp TTCEEEEECCS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSE-EEECCTTTSCHHHHHHHHHHHSSSCCSEEE
T ss_pred CCCEEEEECCC-HHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhCCCE-EEcCcccccHHHHHHHHhccccCCCCCEEE
Confidence 34678889975 3333221 12467899999999988877653 222 22331001110 11 24699998
Q ss_pred ecccccccCCHHHHHHHHHhhccCCcEEEE
Q 022305 204 NVVSVDYLTKPIEVFKEMCQVLKPGGLAIV 233 (299)
Q Consensus 204 s~~~l~~~~d~~~~l~ei~rvLkpGG~lii 233 (299)
....- ...+++..+.|+|||.+++
T Consensus 246 d~~g~------~~~~~~~~~~l~~~G~iv~ 269 (352)
T 1e3j_A 246 DCSGN------EKCITIGINITRTGGTLML 269 (352)
T ss_dssp ECSCC------HHHHHHHHHHSCTTCEEEE
T ss_pred ECCCC------HHHHHHHHHHHhcCCEEEE
Confidence 66432 3467888999999998765
No 346
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=70.15 E-value=1.1 Score=40.35 Aligned_cols=85 Identities=12% Similarity=0.099 Sum_probs=54.0
Q ss_pred cCCceeeccCcCCccccC---CCCCCCeEEEEeCCHHHHHhcCCC-CcEEEeccCCCCCCCCCCCCeeEEEecccccccC
Q 022305 137 YYSEVFPPSNTPGVSHFP---PGYKQDRIVGMGMNEEELKRNPVL-TEYVVQDLNLNPKLPFEDNSFDVITNVVSVDYLT 212 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~~~~---~~~~~~~v~gvD~S~~ml~~a~~~-~~~~~~D~~~~~~lpf~~~~FD~Vis~~~l~~~~ 212 (299)
.-++||-.|+| |.+.+. ....+++|+++|.+++-++.+++. .+.+..|. +.+ .. .+|+|+-...-.
T Consensus 176 ~g~~VlV~GaG-~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~~~~---~~~--~~-~~D~vid~~g~~--- 245 (348)
T 3two_A 176 KGTKVGVAGFG-GLGSMAVKYAVAMGAEVSVFARNEHKKQDALSMGVKHFYTDP---KQC--KE-ELDFIISTIPTH--- 245 (348)
T ss_dssp TTCEEEEESCS-HHHHHHHHHHHHTTCEEEEECSSSTTHHHHHHTTCSEEESSG---GGC--CS-CEEEEEECCCSC---
T ss_pred CCCEEEEECCc-HHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhcCCCeecCCH---HHH--hc-CCCEEEECCCcH---
Confidence 34678888875 332221 122467999999999888877664 33332332 222 22 799999654322
Q ss_pred CHHHHHHHHHhhccCCcEEEEE
Q 022305 213 KPIEVFKEMCQVLKPGGLAIVS 234 (299)
Q Consensus 213 d~~~~l~ei~rvLkpGG~lii~ 234 (299)
..+++..+.|+|||.+++-
T Consensus 246 ---~~~~~~~~~l~~~G~iv~~ 264 (348)
T 3two_A 246 ---YDLKDYLKLLTYNGDLALV 264 (348)
T ss_dssp ---CCHHHHHTTEEEEEEEEEC
T ss_pred ---HHHHHHHHHHhcCCEEEEE
Confidence 2467888999999987763
No 347
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=68.71 E-value=1.8 Score=38.53 Aligned_cols=86 Identities=15% Similarity=0.175 Sum_probs=50.5
Q ss_pred ceeeccCcCCccccCC---CCCCCeEEEEeCCHHHHHhcCCC-CcEEEeccCCC--CCC-CCCCCCeeEEEecccccccC
Q 022305 140 EVFPPSNTPGVSHFPP---GYKQDRIVGMGMNEEELKRNPVL-TEYVVQDLNLN--PKL-PFEDNSFDVITNVVSVDYLT 212 (299)
Q Consensus 140 ~vLDiGcG~G~~~~~~---~~~~~~v~gvD~S~~ml~~a~~~-~~~~~~D~~~~--~~l-pf~~~~FD~Vis~~~l~~~~ 212 (299)
+||-.|++.|.+.+.. ...+++|++++.+++-++.+++. .+.+ .|.... +.+ ....+.+|+|+....-
T Consensus 152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~lGa~~~-i~~~~~~~~~~~~~~~~~~d~vid~~g~---- 226 (328)
T 1xa0_A 152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRVLGAKEV-LAREDVMAERIRPLDKQRWAAAVDPVGG---- 226 (328)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHHTTCSEE-EECC---------CCSCCEEEEEECSTT----
T ss_pred eEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCcEE-EecCCcHHHHHHHhcCCcccEEEECCcH----
Confidence 7999997545433321 22467899999998776666543 2221 122100 111 1223469999866432
Q ss_pred CHHHHHHHHHhhccCCcEEEE
Q 022305 213 KPIEVFKEMCQVLKPGGLAIV 233 (299)
Q Consensus 213 d~~~~l~ei~rvLkpGG~lii 233 (299)
..+.+..+.|++||.+++
T Consensus 227 ---~~~~~~~~~l~~~G~~v~ 244 (328)
T 1xa0_A 227 ---RTLATVLSRMRYGGAVAV 244 (328)
T ss_dssp ---TTHHHHHHTEEEEEEEEE
T ss_pred ---HHHHHHHHhhccCCEEEE
Confidence 246788899999998765
No 348
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=67.64 E-value=0.79 Score=41.34 Aligned_cols=86 Identities=10% Similarity=0.134 Sum_probs=53.0
Q ss_pred CCceeeccCcCCccccC---CCCCCCeEEEEeCCHHHHHhcCCC-CcEEEeccCCCCCCC------CCCCCeeEEEeccc
Q 022305 138 YSEVFPPSNTPGVSHFP---PGYKQDRIVGMGMNEEELKRNPVL-TEYVVQDLNLNPKLP------FEDNSFDVITNVVS 207 (299)
Q Consensus 138 ~~~vLDiGcG~G~~~~~---~~~~~~~v~gvD~S~~ml~~a~~~-~~~~~~D~~~~~~lp------f~~~~FD~Vis~~~ 207 (299)
.++||-.|+++|.+... ....+++|+++|.+++-++.+++. .+.+ .|.. +.+. .....+|+|+.+..
T Consensus 160 g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~v-~~~~--~~~~~~v~~~~~~~g~Dvvid~~g 236 (342)
T 4eye_A 160 GETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKSVGADIV-LPLE--EGWAKAVREATGGAGVDMVVDPIG 236 (342)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEE-EESS--TTHHHHHHHHTTTSCEEEEEESCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEE-ecCc--hhHHHHHHHHhCCCCceEEEECCc
Confidence 46789888854543322 122467999999998887766653 2222 2221 1110 12336999997654
Q ss_pred ccccCCHHHHHHHHHhhccCCcEEEE
Q 022305 208 VDYLTKPIEVFKEMCQVLKPGGLAIV 233 (299)
Q Consensus 208 l~~~~d~~~~l~ei~rvLkpGG~lii 233 (299)
-. .+.+..+.|++||.+++
T Consensus 237 ~~-------~~~~~~~~l~~~G~iv~ 255 (342)
T 4eye_A 237 GP-------AFDDAVRTLASEGRLLV 255 (342)
T ss_dssp ---------CHHHHHHTEEEEEEEEE
T ss_pred hh-------HHHHHHHhhcCCCEEEE
Confidence 32 46788899999997765
No 349
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=67.51 E-value=1.1 Score=40.58 Aligned_cols=93 Identities=13% Similarity=0.080 Sum_probs=56.7
Q ss_pred CCceeeccCcCCccccCCCCCC---CeE-EEEeCCHHHHHhcCCC--CcEEEeccCCCCCCC---CCCCCeeEEEecccc
Q 022305 138 YSEVFPPSNTPGVSHFPPGYKQ---DRI-VGMGMNEEELKRNPVL--TEYVVQDLNLNPKLP---FEDNSFDVITNVVSV 208 (299)
Q Consensus 138 ~~~vLDiGcG~G~~~~~~~~~~---~~v-~gvD~S~~ml~~a~~~--~~~~~~D~~~~~~lp---f~~~~FD~Vis~~~l 208 (299)
.-+++|+-||.|...+.....+ ..+ .++|+++...+.-+.+ ..++.+|+ .++. ++...+|+++...=.
T Consensus 10 ~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~~~~~~~DI---~~~~~~~i~~~~~Dil~ggpPC 86 (327)
T 3qv2_A 10 QVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFKEEVQVKNL---DSISIKQIESLNCNTWFMSPPC 86 (327)
T ss_dssp CEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHCCCCBCCCT---TTCCHHHHHHTCCCEEEECCCC
T ss_pred CCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCCCCcccCCh---hhcCHHHhccCCCCEEEecCCc
Confidence 3479999999887444433334 345 6999999988754432 22567788 5553 222368999965332
Q ss_pred ccc-----------CCHH-HHHHHHHh-hcc-----CCcEEEEE
Q 022305 209 DYL-----------TKPI-EVFKEMCQ-VLK-----PGGLAIVS 234 (299)
Q Consensus 209 ~~~-----------~d~~-~~l~ei~r-vLk-----pGG~lii~ 234 (299)
+.+ .|.. ..+.++.| +++ |. .++++
T Consensus 87 Q~fs~S~ag~~~~~~d~r~~L~~~~~r~~i~~~~~~P~-~~~lE 129 (327)
T 3qv2_A 87 QPYNNSIMSKHKDINDPRAKSVLHLYRDILPYLINKPK-HIFIE 129 (327)
T ss_dssp TTCSHHHHTTTCTTTCGGGHHHHHHHHTTGGGCSSCCS-EEEEE
T ss_pred cCcccccCCCCCCCccccchhHHHHHHHHHHHhccCCC-EEEEE
Confidence 222 3444 56777777 554 43 55555
No 350
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=67.27 E-value=0.37 Score=43.97 Aligned_cols=64 Identities=16% Similarity=0.151 Sum_probs=44.2
Q ss_pred CceeeccCcCCccccCCCCCC---CeEEEEeCCHHHHHhcCCC---CcEEEeccCCCCCCC---CCCCCeeEEEec
Q 022305 139 SEVFPPSNTPGVSHFPPGYKQ---DRIVGMGMNEEELKRNPVL---TEYVVQDLNLNPKLP---FEDNSFDVITNV 205 (299)
Q Consensus 139 ~~vLDiGcG~G~~~~~~~~~~---~~v~gvD~S~~ml~~a~~~---~~~~~~D~~~~~~lp---f~~~~FD~Vis~ 205 (299)
.+++|+-||+|...+.....+ ..+.++|+++.+++..+.+ ..++.+|+ .++. ++...+|+|+..
T Consensus 3 ~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~~~~~~~~Di---~~~~~~~~~~~~~D~l~~g 75 (343)
T 1g55_A 3 LRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPHTQLLAKTI---EGITLEEFDRLSFDMILMS 75 (343)
T ss_dssp EEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTTSCEECSCG---GGCCHHHHHHHCCSEEEEC
T ss_pred CeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhccccccccCCH---HHccHhHcCcCCcCEEEEc
Confidence 378999999997444433333 3699999999998865543 45778888 5543 112258999965
No 351
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=65.85 E-value=0.64 Score=41.06 Aligned_cols=85 Identities=14% Similarity=0.096 Sum_probs=52.1
Q ss_pred cCCceeeccCcCCccccC---CCCCCCeEEEEeCCHHHHHhcCCC-CcEEEeccCCCCC-CCCC--CCCeeEEEeccccc
Q 022305 137 YYSEVFPPSNTPGVSHFP---PGYKQDRIVGMGMNEEELKRNPVL-TEYVVQDLNLNPK-LPFE--DNSFDVITNVVSVD 209 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~~~~---~~~~~~~v~gvD~S~~ml~~a~~~-~~~~~~D~~~~~~-lpf~--~~~FD~Vis~~~l~ 209 (299)
...+||-.|++.|.+... ....+++|+++|.+++-++.+++. .+.+ .|. .+ -.+. -+.+|+|+. ..-
T Consensus 125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~-~~~---~~~~~~~~~~~~~d~vid-~g~- 198 (302)
T 1iz0_A 125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLALGAEEA-ATY---AEVPERAKAWGGLDLVLE-VRG- 198 (302)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHHTTCSEE-EEG---GGHHHHHHHTTSEEEEEE-CSC-
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCCEE-EEC---CcchhHHHHhcCceEEEE-CCH-
Confidence 346799999854543322 112467999999998877666543 2222 232 11 0000 056999987 432
Q ss_pred ccCCHHHHHHHHHhhccCCcEEEE
Q 022305 210 YLTKPIEVFKEMCQVLKPGGLAIV 233 (299)
Q Consensus 210 ~~~d~~~~l~ei~rvLkpGG~lii 233 (299)
..+++..+.|++||.++.
T Consensus 199 ------~~~~~~~~~l~~~G~~v~ 216 (302)
T 1iz0_A 199 ------KEVEESLGLLAHGGRLVY 216 (302)
T ss_dssp ------TTHHHHHTTEEEEEEEEE
T ss_pred ------HHHHHHHHhhccCCEEEE
Confidence 256888999999997765
No 352
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=65.33 E-value=1.5 Score=39.58 Aligned_cols=88 Identities=11% Similarity=0.055 Sum_probs=53.1
Q ss_pred cCCceeeccCc-CCc--cccCCCCCCC-eEEEEeCCHHHHHhcCCC-CcEEEeccCCCCCCC------CCCCCeeEEEec
Q 022305 137 YYSEVFPPSNT-PGV--SHFPPGYKQD-RIVGMGMNEEELKRNPVL-TEYVVQDLNLNPKLP------FEDNSFDVITNV 205 (299)
Q Consensus 137 ~~~~vLDiGcG-~G~--~~~~~~~~~~-~v~gvD~S~~ml~~a~~~-~~~~~~D~~~~~~lp------f~~~~FD~Vis~ 205 (299)
.-.+||-.|+| .|. ..++.. .+. +|+++|.+++-++.+++. .+.+ .|... +.+. .....+|+|+-.
T Consensus 166 ~g~~VlV~GaG~vG~~a~qla~~-~Ga~~Vi~~~~~~~~~~~~~~lGa~~v-i~~~~-~~~~~~v~~~t~g~g~D~v~d~ 242 (352)
T 3fpc_A 166 LGDTVCVIGIGPVGLMSVAGANH-LGAGRIFAVGSRKHCCDIALEYGATDI-INYKN-GDIVEQILKATDGKGVDKVVIA 242 (352)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHT-TTCSSEEEECCCHHHHHHHHHHTCCEE-ECGGG-SCHHHHHHHHTTTCCEEEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHH-cCCcEEEEECCCHHHHHHHHHhCCceE-EcCCC-cCHHHHHHHHcCCCCCCEEEEC
Confidence 34678888875 232 122222 355 899999999888877653 2222 22200 1110 123469999965
Q ss_pred ccccccCCHHHHHHHHHhhccCCcEEEE
Q 022305 206 VSVDYLTKPIEVFKEMCQVLKPGGLAIV 233 (299)
Q Consensus 206 ~~l~~~~d~~~~l~ei~rvLkpGG~lii 233 (299)
..- ...+++..+.|+|||.+++
T Consensus 243 ~g~------~~~~~~~~~~l~~~G~~v~ 264 (352)
T 3fpc_A 243 GGD------VHTFAQAVKMIKPGSDIGN 264 (352)
T ss_dssp SSC------TTHHHHHHHHEEEEEEEEE
T ss_pred CCC------hHHHHHHHHHHhcCCEEEE
Confidence 332 2467889999999998765
No 353
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=64.43 E-value=5.6 Score=35.77 Aligned_cols=89 Identities=9% Similarity=0.079 Sum_probs=53.1
Q ss_pred cCCceeeccCcCCccccCC---CCCCC-eEEEEeCCHHHHHhcCCC-CcEEEeccCC------CCCCC-CCCCCeeEEEe
Q 022305 137 YYSEVFPPSNTPGVSHFPP---GYKQD-RIVGMGMNEEELKRNPVL-TEYVVQDLNL------NPKLP-FEDNSFDVITN 204 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~~~~~---~~~~~-~v~gvD~S~~ml~~a~~~-~~~~~~D~~~------~~~lp-f~~~~FD~Vis 204 (299)
...+||-.|+| |.+.+.. ...+. +|+++|.+++-++.+++. .+. ..|... .+.+. ...+.+|+|+-
T Consensus 171 ~g~~VlV~GaG-~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~-vi~~~~~~~~~~~~~i~~~~~~g~D~vid 248 (356)
T 1pl8_A 171 LGHKVLVCGAG-PIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADL-VLQISKESPQEIARKVEGQLGCKPEVTIE 248 (356)
T ss_dssp TTCEEEEECCS-HHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSE-EEECSSCCHHHHHHHHHHHHTSCCSEEEE
T ss_pred CCCEEEEECCC-HHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCE-EEcCcccccchHHHHHHHHhCCCCCEEEE
Confidence 34678989975 3322211 12355 899999999888877653 222 122200 00010 01146999986
Q ss_pred cccccccCCHHHHHHHHHhhccCCcEEEE
Q 022305 205 VVSVDYLTKPIEVFKEMCQVLKPGGLAIV 233 (299)
Q Consensus 205 ~~~l~~~~d~~~~l~ei~rvLkpGG~lii 233 (299)
...- ...+++..++|+|||.+++
T Consensus 249 ~~g~------~~~~~~~~~~l~~~G~iv~ 271 (356)
T 1pl8_A 249 CTGA------EASIQAGIYATRSGGTLVL 271 (356)
T ss_dssp CSCC------HHHHHHHHHHSCTTCEEEE
T ss_pred CCCC------hHHHHHHHHHhcCCCEEEE
Confidence 5431 3467888999999998765
No 354
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=62.15 E-value=5.1 Score=37.49 Aligned_cols=87 Identities=13% Similarity=0.106 Sum_probs=53.5
Q ss_pred CCceeeccCcCCccccC---CCCCCCeEEEEeCCHHHHHhcCCC-CcEEEeccCCCCCCC--------------------
Q 022305 138 YSEVFPPSNTPGVSHFP---PGYKQDRIVGMGMNEEELKRNPVL-TEYVVQDLNLNPKLP-------------------- 193 (299)
Q Consensus 138 ~~~vLDiGcG~G~~~~~---~~~~~~~v~gvD~S~~ml~~a~~~-~~~~~~D~~~~~~lp-------------------- 193 (299)
-.+||=.|++.|.+.+. ....++++++++.+++-++.+++. .+.+ .|... ..+.
T Consensus 229 g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~~~lGa~~v-i~~~~-~d~~~~~~~~~~~~~~~~~~~~~i 306 (456)
T 3krt_A 229 GDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEICRAMGAEAI-IDRNA-EGYRFWKDENTQDPKEWKRFGKRI 306 (456)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCCEE-EETTT-TTCCSEEETTEECHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHHHhhCCcEE-EecCc-CcccccccccccchHHHHHHHHHH
Confidence 35688888744443332 122478999999999888877653 2222 22200 1110
Q ss_pred ---CCCCCeeEEEecccccccCCHHHHHHHHHhhccCCcEEEE
Q 022305 194 ---FEDNSFDVITNVVSVDYLTKPIEVFKEMCQVLKPGGLAIV 233 (299)
Q Consensus 194 ---f~~~~FD~Vis~~~l~~~~d~~~~l~ei~rvLkpGG~lii 233 (299)
.....+|+|+-...- ..+.+..++|++||.+++
T Consensus 307 ~~~t~g~g~Dvvid~~G~-------~~~~~~~~~l~~~G~iv~ 342 (456)
T 3krt_A 307 RELTGGEDIDIVFEHPGR-------ETFGASVFVTRKGGTITT 342 (456)
T ss_dssp HHHHTSCCEEEEEECSCH-------HHHHHHHHHEEEEEEEEE
T ss_pred HHHhCCCCCcEEEEcCCc-------hhHHHHHHHhhCCcEEEE
Confidence 112479999865431 467888999999998776
No 355
>3iei_A Leucine carboxyl methyltransferase 1; LCMT-1, S-adenosyl-L-methionine; HET: SAH MES; 1.90A {Homo sapiens} PDB: 3p71_T* 3mnt_A* 3o7w_A*
Probab=61.57 E-value=60 Score=29.10 Aligned_cols=140 Identities=10% Similarity=0.055 Sum_probs=78.3
Q ss_pred CCceeeccCcCCccccCCC---CCCCeEEEEeCCHHHHHhc------------------------------CCCCcEEEe
Q 022305 138 YSEVFPPSNTPGVSHFPPG---YKQDRIVGMGMNEEELKRN------------------------------PVLTEYVVQ 184 (299)
Q Consensus 138 ~~~vLDiGcG~G~~~~~~~---~~~~~v~gvD~S~~ml~~a------------------------------~~~~~~~~~ 184 (299)
...|+-+|||-=+..+... .++..++=||.-+.+-.+. ..+..++.+
T Consensus 91 ~~QVV~LGaGlDTr~~RL~~~~~~~~~~~EVD~P~vi~~K~~~l~~~~~l~~~lg~~~~~~~~~~~~~~l~s~~y~~v~~ 170 (334)
T 3iei_A 91 HCQIVNLGAGMDTTFWRLKDEDLLSSKYFEVDFPMIVTRKLHSIKCKPPLSSPILELHSEDTLQMDGHILDSKRYAVIGA 170 (334)
T ss_dssp CSEEEEETCTTCCHHHHHHHTTCCCSEEEEEECHHHHHHHHHHHHHCHHHHHHHHHHSSSSSCBCCTTEEECSSEEEEEC
T ss_pred CCEEEEeCCCcCchHHHhcCCCCCCCeEEECCcHHHHHHHHHHHhhchhhhhhhcccccccccccccccCCCCceEEEcc
Confidence 4579999998555333221 2357888899855433211 223567778
Q ss_pred ccCCCCCC-------CCCCCCeeEEEecccccccC--CHHHHHHHHHhhccCCcEEEEEecCc--chHHHHHHhhhhcCC
Q 022305 185 DLNLNPKL-------PFEDNSFDVITNVVSVDYLT--KPIEVFKEMCQVLKPGGLAIVSFSNR--CFWTKAISIWTSTGD 253 (299)
Q Consensus 185 D~~~~~~l-------pf~~~~FD~Vis~~~l~~~~--d~~~~l~ei~rvLkpGG~lii~~~~~--~~~~~~~~~~~~~~~ 253 (299)
|+.....+ .+..+.-=++++-.++.|++ +...+|+.+.+...+|..++.+..++ .+-......+...+.
T Consensus 171 DL~d~~~l~~~L~~~g~d~~~Ptl~iaEGvL~YL~~~~~~~ll~~ia~~f~~~~~i~yE~i~p~d~fg~~M~~~l~~~g~ 250 (334)
T 3iei_A 171 DLRDLSELEEKLKKCNMNTQLPTLLIAECVLVYMTPEQSANLLKWAANSFERAMFINYEQVNMGDRFGQIMIENLRRRQC 250 (334)
T ss_dssp CTTCHHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHCSSEEEEEEEECCTTSHHHHHHHHHHHTTTC
T ss_pred ccccchhHHHHHHhcCCCCCCCEEEEEchhhhCCCHHHHHHHHHHHHHhCCCceEEEEeccCCCCHHHHHHHHHHHHhCC
Confidence 88311011 23344455888889999996 45678888888775555666664442 222233333332221
Q ss_pred C-------chhhhHHHHHHHhCCCCCCeeeec
Q 022305 254 A-------DHVMIVGAYFHYAGGYEPPQAVDI 278 (299)
Q Consensus 254 ~-------~~~~~~~~~~~~~aGF~~v~~~~~ 278 (299)
+ ....-..+.| ...||..+++.++
T Consensus 251 pl~sl~~y~t~~~~~~r~-~~~Gw~~~~~~d~ 281 (334)
T 3iei_A 251 DLAGVETCKSLESQKERL-LSNGWETASAVDM 281 (334)
T ss_dssp CCTTGGGGGCHHHHHHHH-HTTTCSEEEEEEH
T ss_pred CCcccccCCCHHHHHHHH-HHcCCCcceeecH
Confidence 1 1112223344 5689998777665
No 356
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=61.41 E-value=2 Score=38.53 Aligned_cols=88 Identities=13% Similarity=0.148 Sum_probs=54.8
Q ss_pred cCCceeeccCcCCcccc----CCCCCCCeEEEEeCCHHHHHhcCCC-CcEEEeccCCCCCCC-----C-CCCCeeEEEec
Q 022305 137 YYSEVFPPSNTPGVSHF----PPGYKQDRIVGMGMNEEELKRNPVL-TEYVVQDLNLNPKLP-----F-EDNSFDVITNV 205 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~~~----~~~~~~~~v~gvD~S~~ml~~a~~~-~~~~~~D~~~~~~lp-----f-~~~~FD~Vis~ 205 (299)
.-.+||-.|+| |.+.+ +....+.+|+++|.+++-++.+++. .+.+. |.. ..+. . ....+|+|+-.
T Consensus 171 ~g~~vlv~GaG-~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~lGa~~~i-~~~--~~~~~~v~~~t~g~g~d~v~d~ 246 (345)
T 3jv7_A 171 PGSTAVVIGVG-GLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGADAAV-KSG--AGAADAIRELTGGQGATAVFDF 246 (345)
T ss_dssp TTCEEEEECCS-HHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHTTCSEEE-ECS--TTHHHHHHHHHGGGCEEEEEES
T ss_pred CCCEEEEECCC-HHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEE-cCC--CcHHHHHHHHhCCCCCeEEEEC
Confidence 34678888875 33222 2222367999999999988887764 22222 221 1110 0 12369999865
Q ss_pred ccccccCCHHHHHHHHHhhccCCcEEEEE
Q 022305 206 VSVDYLTKPIEVFKEMCQVLKPGGLAIVS 234 (299)
Q Consensus 206 ~~l~~~~d~~~~l~ei~rvLkpGG~lii~ 234 (299)
..- ...+++..+.|+|||.+++.
T Consensus 247 ~G~------~~~~~~~~~~l~~~G~iv~~ 269 (345)
T 3jv7_A 247 VGA------QSTIDTAQQVVAVDGHISVV 269 (345)
T ss_dssp SCC------HHHHHHHHHHEEEEEEEEEC
T ss_pred CCC------HHHHHHHHHHHhcCCEEEEE
Confidence 432 34788999999999987763
No 357
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=60.02 E-value=0.76 Score=40.81 Aligned_cols=82 Identities=11% Similarity=0.041 Sum_probs=49.1
Q ss_pred CCceeeccCcCCccccCC---CCCCCeEEEEeCCHHHHHhcCCC-CcEEEeccCCCCCCCCCCCCeeEEEecccccccCC
Q 022305 138 YSEVFPPSNTPGVSHFPP---GYKQDRIVGMGMNEEELKRNPVL-TEYVVQDLNLNPKLPFEDNSFDVITNVVSVDYLTK 213 (299)
Q Consensus 138 ~~~vLDiGcG~G~~~~~~---~~~~~~v~gvD~S~~ml~~a~~~-~~~~~~D~~~~~~lpf~~~~FD~Vis~~~l~~~~d 213 (299)
.++||=.|+| +.+.+.. ...+++|+++| |++-++.+++. .+.+..|. +.+ .+.+|+|+-...-.
T Consensus 143 g~~VlV~GaG-~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~~~~lGa~~v~~d~---~~v---~~g~Dvv~d~~g~~---- 210 (315)
T 3goh_A 143 QREVLIVGFG-AVNNLLTQMLNNAGYVVDLVS-ASLSQALAAKRGVRHLYREP---SQV---TQKYFAIFDAVNSQ---- 210 (315)
T ss_dssp CCEEEEECCS-HHHHHHHHHHHHHTCEEEEEC-SSCCHHHHHHHTEEEEESSG---GGC---CSCEEEEECC--------
T ss_pred CCEEEEECCC-HHHHHHHHHHHHcCCEEEEEE-ChhhHHHHHHcCCCEEEcCH---HHh---CCCccEEEECCCch----
Confidence 4678888883 3333221 22367999999 98877776653 22222232 444 56799998654322
Q ss_pred HHHHHHHHHhhccCCcEEEEE
Q 022305 214 PIEVFKEMCQVLKPGGLAIVS 234 (299)
Q Consensus 214 ~~~~l~ei~rvLkpGG~lii~ 234 (299)
.+.+..+.|+|||.++.-
T Consensus 211 ---~~~~~~~~l~~~G~~v~~ 228 (315)
T 3goh_A 211 ---NAAALVPSLKANGHIICI 228 (315)
T ss_dssp ------TTGGGEEEEEEEEEE
T ss_pred ---hHHHHHHHhcCCCEEEEE
Confidence 225678999999987764
No 358
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=59.56 E-value=1.4 Score=40.23 Aligned_cols=86 Identities=19% Similarity=0.188 Sum_probs=52.2
Q ss_pred cCCceeeccCcCCccccC---CCCCCCeEEEEeCCHHHHHhcCCC-CcEEEeccCCC---CCCCCCCCCeeEEEeccccc
Q 022305 137 YYSEVFPPSNTPGVSHFP---PGYKQDRIVGMGMNEEELKRNPVL-TEYVVQDLNLN---PKLPFEDNSFDVITNVVSVD 209 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~~~~---~~~~~~~v~gvD~S~~ml~~a~~~-~~~~~~D~~~~---~~lpf~~~~FD~Vis~~~l~ 209 (299)
..++||-.|+| |.+.+. ....+++|+++|.|++-++.+++. .+.+ .|.... +.+. +.+|+|+....-.
T Consensus 194 ~g~~VlV~GaG-~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~lGa~~v-i~~~~~~~~~~~~---~g~Dvvid~~g~~ 268 (369)
T 1uuf_A 194 PGKKVGVVGIG-GLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGADEV-VNSRNADEMAAHL---KSFDFILNTVAAP 268 (369)
T ss_dssp TTCEEEEECCS-HHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEE-EETTCHHHHHTTT---TCEEEEEECCSSC
T ss_pred CCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEE-eccccHHHHHHhh---cCCCEEEECCCCH
Confidence 34678889886 333322 122467899999999888776553 2222 222100 1111 5699999664432
Q ss_pred ccCCHHHHHHHHHhhccCCcEEEE
Q 022305 210 YLTKPIEVFKEMCQVLKPGGLAIV 233 (299)
Q Consensus 210 ~~~d~~~~l~ei~rvLkpGG~lii 233 (299)
..+++..+.|+|||.+++
T Consensus 269 ------~~~~~~~~~l~~~G~iv~ 286 (369)
T 1uuf_A 269 ------HNLDDFTTLLKRDGTMTL 286 (369)
T ss_dssp ------CCHHHHHTTEEEEEEEEE
T ss_pred ------HHHHHHHHHhccCCEEEE
Confidence 235778899999998765
No 359
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=58.56 E-value=4.2 Score=36.89 Aligned_cols=88 Identities=14% Similarity=0.181 Sum_probs=53.0
Q ss_pred CCceeeccCcCCccccC---CCCCCC-eEEEEeCCHHHHHhcCCC-CcEEEeccCC-CCCCC-----CCCCCeeEEEecc
Q 022305 138 YSEVFPPSNTPGVSHFP---PGYKQD-RIVGMGMNEEELKRNPVL-TEYVVQDLNL-NPKLP-----FEDNSFDVITNVV 206 (299)
Q Consensus 138 ~~~vLDiGcG~G~~~~~---~~~~~~-~v~gvD~S~~ml~~a~~~-~~~~~~D~~~-~~~lp-----f~~~~FD~Vis~~ 206 (299)
.++||-.|+| |.+.+. ....++ +|+++|.+++-++.+++. .+.+ .|... .+.+. ..++.+|+|+...
T Consensus 193 g~~VlV~GaG-~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~v-i~~~~~~~~~~~~~~~~~~~g~D~vid~~ 270 (374)
T 1cdo_A 193 GSTCAVFGLG-AVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDF-VNPNDHSEPISQVLSKMTNGGVDFSLECV 270 (374)
T ss_dssp TCEEEEECCS-HHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEE-ECGGGCSSCHHHHHHHHHTSCBSEEEECS
T ss_pred CCEEEEECCC-HHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCceE-EeccccchhHHHHHHHHhCCCCCEEEECC
Confidence 3578888875 332221 112355 899999999888877653 2222 23210 01110 1123699998654
Q ss_pred cccccCCHHHHHHHHHhhccCC-cEEEE
Q 022305 207 SVDYLTKPIEVFKEMCQVLKPG-GLAIV 233 (299)
Q Consensus 207 ~l~~~~d~~~~l~ei~rvLkpG-G~lii 233 (299)
.- ...+++..+.|+|| |.+++
T Consensus 271 g~------~~~~~~~~~~l~~~~G~iv~ 292 (374)
T 1cdo_A 271 GN------VGVMRNALESCLKGWGVSVL 292 (374)
T ss_dssp CC------HHHHHHHHHTBCTTTCEEEE
T ss_pred CC------HHHHHHHHHHhhcCCcEEEE
Confidence 32 35678899999999 98765
No 360
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=58.34 E-value=4.3 Score=36.43 Aligned_cols=87 Identities=14% Similarity=0.160 Sum_probs=52.5
Q ss_pred CCceeeccCcCCccccC---CCCCCCeEEEEeCCHHHHHhcCCC-CcEEEeccCCCCCC-----CCCCCCeeEEEecccc
Q 022305 138 YSEVFPPSNTPGVSHFP---PGYKQDRIVGMGMNEEELKRNPVL-TEYVVQDLNLNPKL-----PFEDNSFDVITNVVSV 208 (299)
Q Consensus 138 ~~~vLDiGcG~G~~~~~---~~~~~~~v~gvD~S~~ml~~a~~~-~~~~~~D~~~~~~l-----pf~~~~FD~Vis~~~l 208 (299)
..+||=.|...|.+.+. ....+++|+++|.+++-++.+++. .+.+ .|.. +.+ ....+.+|+|+....
T Consensus 151 g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~v-i~~~--~~~~~~~~~~~~~g~Dvv~d~~g- 226 (346)
T 3fbg_A 151 GKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKKMGADIV-LNHK--ESLLNQFKTQGIELVDYVFCTFN- 226 (346)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHHHTCSEE-ECTT--SCHHHHHHHHTCCCEEEEEESSC-
T ss_pred CCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEE-EECC--ccHHHHHHHhCCCCccEEEECCC-
Confidence 45677774332332221 123467999999999888877653 2222 2221 111 012346999987532
Q ss_pred cccCCHHHHHHHHHhhccCCcEEEE
Q 022305 209 DYLTKPIEVFKEMCQVLKPGGLAIV 233 (299)
Q Consensus 209 ~~~~d~~~~l~ei~rvLkpGG~lii 233 (299)
-...++++.+.|++||.++.
T Consensus 227 -----~~~~~~~~~~~l~~~G~iv~ 246 (346)
T 3fbg_A 227 -----TDMYYDDMIQLVKPRGHIAT 246 (346)
T ss_dssp -----HHHHHHHHHHHEEEEEEEEE
T ss_pred -----chHHHHHHHHHhccCCEEEE
Confidence 34567889999999998865
No 361
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=57.05 E-value=4.3 Score=37.79 Aligned_cols=89 Identities=11% Similarity=0.093 Sum_probs=53.1
Q ss_pred CCceeeccCcCCccccCC---CCCCCeEEEEeCCHHHHHhcCCC-Cc-EEEe-ccCCCC------------------CC-
Q 022305 138 YSEVFPPSNTPGVSHFPP---GYKQDRIVGMGMNEEELKRNPVL-TE-YVVQ-DLNLNP------------------KL- 192 (299)
Q Consensus 138 ~~~vLDiGcG~G~~~~~~---~~~~~~v~gvD~S~~ml~~a~~~-~~-~~~~-D~~~~~------------------~l- 192 (299)
.++||=.|++.|.+.... ...++++++++.+++-++.+++. .+ .+.. +..... .+
T Consensus 221 g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 300 (447)
T 4a0s_A 221 GDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVRALGCDLVINRAELGITDDIADDPRRVVETGRKLAKLVV 300 (447)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCCCEEEHHHHTCCTTGGGCHHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCEEEecccccccccccccccccchhhhHHHHHHH
Confidence 356888887545433321 22478999999999988877653 22 2211 110000 00
Q ss_pred CCCCCCeeEEEecccccccCCHHHHHHHHHhhccCCcEEEE
Q 022305 193 PFEDNSFDVITNVVSVDYLTKPIEVFKEMCQVLKPGGLAIV 233 (299)
Q Consensus 193 pf~~~~FD~Vis~~~l~~~~d~~~~l~ei~rvLkpGG~lii 233 (299)
......+|+|+.+..- ..++...+.|++||.+++
T Consensus 301 ~~~g~g~Dvvid~~G~-------~~~~~~~~~l~~~G~iv~ 334 (447)
T 4a0s_A 301 EKAGREPDIVFEHTGR-------VTFGLSVIVARRGGTVVT 334 (447)
T ss_dssp HHHSSCCSEEEECSCH-------HHHHHHHHHSCTTCEEEE
T ss_pred HHhCCCceEEEECCCc-------hHHHHHHHHHhcCCEEEE
Confidence 0012469999876542 357888899999998766
No 362
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=56.24 E-value=2.2 Score=39.06 Aligned_cols=48 Identities=10% Similarity=-0.083 Sum_probs=34.8
Q ss_pred CceeeccCcCCccccCCC--CCCCeEEEEeCCHHHHHhcC-----CCCcEEEecc
Q 022305 139 SEVFPPSNTPGVSHFPPG--YKQDRIVGMGMNEEELKRNP-----VLTEYVVQDL 186 (299)
Q Consensus 139 ~~vLDiGcG~G~~~~~~~--~~~~~v~gvD~S~~ml~~a~-----~~~~~~~~D~ 186 (299)
..|||||.|.|..+.... ....+|+++++.+.++..-+ .+++++.+|+
T Consensus 60 ~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~~~~~~l~ii~~D~ 114 (353)
T 1i4w_A 60 LKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKFEGSPLQILKRDP 114 (353)
T ss_dssp CEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHTTTSSCEEECSCT
T ss_pred CEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHhccCCCEEEEECCc
Confidence 679999999996333222 22468999999998876432 3588888888
No 363
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=55.23 E-value=8.2 Score=29.57 Aligned_cols=98 Identities=5% Similarity=-0.141 Sum_probs=57.6
Q ss_pred CceeeccCc-CCcccc-CCCCCCCeEEEEeCCHHHHHhcCC-CCcEEEeccCCCCCCC-CCCCCeeEEEecccccccCCH
Q 022305 139 SEVFPPSNT-PGVSHF-PPGYKQDRIVGMGMNEEELKRNPV-LTEYVVQDLNLNPKLP-FEDNSFDVITNVVSVDYLTKP 214 (299)
Q Consensus 139 ~~vLDiGcG-~G~~~~-~~~~~~~~v~gvD~S~~ml~~a~~-~~~~~~~D~~~~~~lp-f~~~~FD~Vis~~~l~~~~d~ 214 (299)
.+++=+||| .|.... .....+.+|+++|.+++.++.+++ .+.++.+|....+.+. ..-..+|+|++...-. ..
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~~---~~ 84 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLASDIPLVVIETSRTRVDELRERGVRAVLGNAANEEIMQLAHLECAKWLILTIPNG---YE 84 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEESCTTSHHHHHHTTGGGCSEEEECCSCH---HH
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHcCCCEEECCCCCHHHHHhcCcccCCEEEEECCCh---HH
Confidence 568888887 343111 111136799999999998876654 4778888872111111 1224688888653211 11
Q ss_pred HHHHHHHHhhccCCcEEEEEecCcc
Q 022305 215 IEVFKEMCQVLKPGGLAIVSFSNRC 239 (299)
Q Consensus 215 ~~~l~ei~rvLkpGG~lii~~~~~~ 239 (299)
...+....|.+.|+..++....+..
T Consensus 85 n~~~~~~a~~~~~~~~iiar~~~~~ 109 (140)
T 3fwz_A 85 AGEIVASARAKNPDIEIIARAHYDD 109 (140)
T ss_dssp HHHHHHHHHHHCSSSEEEEEESSHH
T ss_pred HHHHHHHHHHHCCCCeEEEEECCHH
Confidence 2234456677888888777665543
No 364
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=55.13 E-value=26 Score=31.45 Aligned_cols=87 Identities=11% Similarity=0.108 Sum_probs=52.9
Q ss_pred CceeeccCcCCcccc----CCCCCCCeEEEEeCCHHHHHhcCCC-CcEEEeccCCCCCC-----CCCCCCeeEEEecccc
Q 022305 139 SEVFPPSNTPGVSHF----PPGYKQDRIVGMGMNEEELKRNPVL-TEYVVQDLNLNPKL-----PFEDNSFDVITNVVSV 208 (299)
Q Consensus 139 ~~vLDiGcG~G~~~~----~~~~~~~~v~gvD~S~~ml~~a~~~-~~~~~~D~~~~~~l-----pf~~~~FD~Vis~~~l 208 (299)
.+||=.|...|.+.+ +....+.+|+++|.+++-++.+++. .+.+ .|.. +.+ ....+.+|+|+-...
T Consensus 173 ~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~lGad~v-i~~~--~~~~~~v~~~~~~g~Dvvid~~g- 248 (363)
T 4dvj_A 173 PAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKSLGAHHV-IDHS--KPLAAEVAALGLGAPAFVFSTTH- 248 (363)
T ss_dssp EEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHTTCSEE-ECTT--SCHHHHHHTTCSCCEEEEEECSC-
T ss_pred CEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHcCCCEE-EeCC--CCHHHHHHHhcCCCceEEEECCC-
Confidence 457777732233222 2222478999999999888877653 2222 2221 111 123357999986532
Q ss_pred cccCCHHHHHHHHHhhccCCcEEEEE
Q 022305 209 DYLTKPIEVFKEMCQVLKPGGLAIVS 234 (299)
Q Consensus 209 ~~~~d~~~~l~ei~rvLkpGG~lii~ 234 (299)
-...++++.+.|+|||.+++-
T Consensus 249 -----~~~~~~~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 249 -----TDKHAAEIADLIAPQGRFCLI 269 (363)
T ss_dssp -----HHHHHHHHHHHSCTTCEEEEC
T ss_pred -----chhhHHHHHHHhcCCCEEEEE
Confidence 335778999999999988763
No 365
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=55.07 E-value=1.4 Score=39.19 Aligned_cols=86 Identities=17% Similarity=0.200 Sum_probs=51.3
Q ss_pred ceeeccCcCCccccCC---CCCCCeEEEEeCCHHHHHhcCCC-CcEE-Ee-ccCCCCCC-CCCCCCeeEEEecccccccC
Q 022305 140 EVFPPSNTPGVSHFPP---GYKQDRIVGMGMNEEELKRNPVL-TEYV-VQ-DLNLNPKL-PFEDNSFDVITNVVSVDYLT 212 (299)
Q Consensus 140 ~vLDiGcG~G~~~~~~---~~~~~~v~gvD~S~~ml~~a~~~-~~~~-~~-D~~~~~~l-pf~~~~FD~Vis~~~l~~~~ 212 (299)
+||-.|++.|.+.+.. ...+++|++++.+++-++.+++. .+.+ .. +.. .+.+ ....+.+|+|+....
T Consensus 153 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~lGa~~v~~~~~~~-~~~~~~~~~~~~d~vid~~g----- 226 (330)
T 1tt7_A 153 SVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQLGASEVISREDVY-DGTLKALSKQQWQGAVDPVG----- 226 (330)
T ss_dssp CEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHHHTCSEEEEHHHHC-SSCCCSSCCCCEEEEEESCC-----
T ss_pred eEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEEECCCch-HHHHHHhhcCCccEEEECCc-----
Confidence 7899998545433321 12357899999987766665442 2222 11 110 0111 122356999986643
Q ss_pred CHHHHHHHHHhhccCCcEEEE
Q 022305 213 KPIEVFKEMCQVLKPGGLAIV 233 (299)
Q Consensus 213 d~~~~l~ei~rvLkpGG~lii 233 (299)
. ..+.+..+.|++||.+++
T Consensus 227 ~--~~~~~~~~~l~~~G~iv~ 245 (330)
T 1tt7_A 227 G--KQLASLLSKIQYGGSVAV 245 (330)
T ss_dssp T--HHHHHHHTTEEEEEEEEE
T ss_pred H--HHHHHHHHhhcCCCEEEE
Confidence 2 367889999999998765
No 366
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=54.03 E-value=5.2 Score=36.20 Aligned_cols=88 Identities=11% Similarity=0.165 Sum_probs=52.8
Q ss_pred CCceeeccCcCCccccCC---CCCCC-eEEEEeCCHHHHHhcCCC-CcEEEeccCC-CCCC-----CCCCCCeeEEEecc
Q 022305 138 YSEVFPPSNTPGVSHFPP---GYKQD-RIVGMGMNEEELKRNPVL-TEYVVQDLNL-NPKL-----PFEDNSFDVITNVV 206 (299)
Q Consensus 138 ~~~vLDiGcG~G~~~~~~---~~~~~-~v~gvD~S~~ml~~a~~~-~~~~~~D~~~-~~~l-----pf~~~~FD~Vis~~ 206 (299)
.++||-.|+| |.+.+.. ...++ +|+++|.+++-++.+++. .+.+ .|... .+.+ ...++.+|+|+-..
T Consensus 192 g~~VlV~GaG-~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~v-i~~~~~~~~~~~~~~~~~~~g~D~vid~~ 269 (374)
T 2jhf_A 192 GSTCAVFGLG-GVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATEC-VNPQDYKKPIQEVLTEMSNGGVDFSFEVI 269 (374)
T ss_dssp TCEEEEECCS-HHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEE-ECGGGCSSCHHHHHHHHTTSCBSEEEECS
T ss_pred CCEEEEECCC-HHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCceE-ecccccchhHHHHHHHHhCCCCcEEEECC
Confidence 3578888875 3322211 12355 899999999888877653 2222 23210 0011 01124699998654
Q ss_pred cccccCCHHHHHHHHHhhccCC-cEEEE
Q 022305 207 SVDYLTKPIEVFKEMCQVLKPG-GLAIV 233 (299)
Q Consensus 207 ~l~~~~d~~~~l~ei~rvLkpG-G~lii 233 (299)
.- ...+++..+.|++| |.+++
T Consensus 270 g~------~~~~~~~~~~l~~~~G~iv~ 291 (374)
T 2jhf_A 270 GR------LDTMVTALSCCQEAYGVSVI 291 (374)
T ss_dssp CC------HHHHHHHHHHBCTTTCEEEE
T ss_pred CC------HHHHHHHHHHhhcCCcEEEE
Confidence 32 35678899999999 98765
No 367
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=53.90 E-value=5.3 Score=32.03 Aligned_cols=97 Identities=9% Similarity=0.020 Sum_probs=54.9
Q ss_pred CceeeccCc-CCccccC-CCCC-CCeEEEEeCCHHHHHhcCC-CCcEEEeccCCCCCCC-C-CCCCeeEEEecccccccC
Q 022305 139 SEVFPPSNT-PGVSHFP-PGYK-QDRIVGMGMNEEELKRNPV-LTEYVVQDLNLNPKLP-F-EDNSFDVITNVVSVDYLT 212 (299)
Q Consensus 139 ~~vLDiGcG-~G~~~~~-~~~~-~~~v~gvD~S~~ml~~a~~-~~~~~~~D~~~~~~lp-f-~~~~FD~Vis~~~l~~~~ 212 (299)
.+|+=+|+| .|..... .... +.+|+++|.+++-++.+++ ....+.+|....+.+. . .-+.+|+|+....- .
T Consensus 40 ~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~~g~~~~~gd~~~~~~l~~~~~~~~ad~vi~~~~~---~ 116 (183)
T 3c85_A 40 AQVLILGMGRIGTGAYDELRARYGKISLGIEIREEAAQQHRSEGRNVISGDATDPDFWERILDTGHVKLVLLAMPH---H 116 (183)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHHTTCCEEECCTTCHHHHHTBCSCCCCCEEEECCSS---H
T ss_pred CcEEEECCCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHHCCCCEEEcCCCCHHHHHhccCCCCCCEEEEeCCC---h
Confidence 478888887 3431111 1113 5789999999988776543 3667777762111111 1 23458988875321 1
Q ss_pred CHHHHHHHHHhhccCCcEEEEEecCc
Q 022305 213 KPIEVFKEMCQVLKPGGLAIVSFSNR 238 (299)
Q Consensus 213 d~~~~l~ei~rvLkpGG~lii~~~~~ 238 (299)
.....+-+..+.+.|++.++....+.
T Consensus 117 ~~~~~~~~~~~~~~~~~~ii~~~~~~ 142 (183)
T 3c85_A 117 QGNQTALEQLQRRNYKGQIAAIAEYP 142 (183)
T ss_dssp HHHHHHHHHHHHTTCCSEEEEEESSH
T ss_pred HHHHHHHHHHHHHCCCCEEEEEECCH
Confidence 11223344566677788887765543
No 368
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=52.61 E-value=5.5 Score=36.08 Aligned_cols=88 Identities=14% Similarity=0.106 Sum_probs=52.8
Q ss_pred CCceeeccCcCCccccCC---CCCCC-eEEEEeCCHHHHHhcCCC-CcEEEeccCC-CCCCC-----CCCCCeeEEEecc
Q 022305 138 YSEVFPPSNTPGVSHFPP---GYKQD-RIVGMGMNEEELKRNPVL-TEYVVQDLNL-NPKLP-----FEDNSFDVITNVV 206 (299)
Q Consensus 138 ~~~vLDiGcG~G~~~~~~---~~~~~-~v~gvD~S~~ml~~a~~~-~~~~~~D~~~-~~~lp-----f~~~~FD~Vis~~ 206 (299)
-++||-.|+| |.+.+.. ...++ +|+++|.+++-++.+++. .+.+ .|... .+.+. ..++.+|+|+-..
T Consensus 196 g~~VlV~GaG-~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~v-i~~~~~~~~~~~~v~~~~~~g~Dvvid~~ 273 (376)
T 1e3i_A 196 GSTCAVFGLG-CVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDC-LNPRELDKPVQDVITELTAGGVDYSLDCA 273 (376)
T ss_dssp TCEEEEECCS-HHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEE-ECGGGCSSCHHHHHHHHHTSCBSEEEESS
T ss_pred CCEEEEECCC-HHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCcEE-EccccccchHHHHHHHHhCCCccEEEECC
Confidence 3578888875 3322221 12355 899999999888877653 2222 23210 00110 1123699998654
Q ss_pred cccccCCHHHHHHHHHhhccCC-cEEEE
Q 022305 207 SVDYLTKPIEVFKEMCQVLKPG-GLAIV 233 (299)
Q Consensus 207 ~l~~~~d~~~~l~ei~rvLkpG-G~lii 233 (299)
.- ...+++..+.|++| |.+++
T Consensus 274 G~------~~~~~~~~~~l~~~~G~iv~ 295 (376)
T 1e3i_A 274 GT------AQTLKAAVDCTVLGWGSCTV 295 (376)
T ss_dssp CC------HHHHHHHHHTBCTTTCEEEE
T ss_pred CC------HHHHHHHHHHhhcCCCEEEE
Confidence 32 35678999999999 97765
No 369
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=52.38 E-value=7.7 Score=34.87 Aligned_cols=90 Identities=16% Similarity=0.087 Sum_probs=52.9
Q ss_pred cCCceeeccCcCCccccCC---CCCCCe-EEEEeCCHHHHHhcCCCC-cEEEeccCCC--CC----C--CCCCCCeeEEE
Q 022305 137 YYSEVFPPSNTPGVSHFPP---GYKQDR-IVGMGMNEEELKRNPVLT-EYVVQDLNLN--PK----L--PFEDNSFDVIT 203 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~~~~~---~~~~~~-v~gvD~S~~ml~~a~~~~-~~~~~D~~~~--~~----l--pf~~~~FD~Vi 203 (299)
...+||=.|+| |.+.+.. +..+++ |+++|.+++-++.+++.. ..+....+.. +. + ......+|+|+
T Consensus 179 ~g~~VlV~GaG-~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~v~~~t~g~g~Dvvi 257 (363)
T 3m6i_A 179 LGDPVLICGAG-PIGLITMLCAKAAGACPLVITDIDEGRLKFAKEICPEVVTHKVERLSAEESAKKIVESFGGIEPAVAL 257 (363)
T ss_dssp TTCCEEEECCS-HHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHCTTCEEEECCSCCHHHHHHHHHHHTSSCCCSEEE
T ss_pred CCCEEEEECCC-HHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhchhcccccccccchHHHHHHHHHHhCCCCCCEEE
Confidence 34678888874 3333221 123555 999999998888776531 1111111000 00 0 01234699999
Q ss_pred ecccccccCCHHHHHHHHHhhccCCcEEEE
Q 022305 204 NVVSVDYLTKPIEVFKEMCQVLKPGGLAIV 233 (299)
Q Consensus 204 s~~~l~~~~d~~~~l~ei~rvLkpGG~lii 233 (299)
-...- ...+++..+.|++||.+++
T Consensus 258 d~~g~------~~~~~~~~~~l~~~G~iv~ 281 (363)
T 3m6i_A 258 ECTGV------ESSIAAAIWAVKFGGKVFV 281 (363)
T ss_dssp ECSCC------HHHHHHHHHHSCTTCEEEE
T ss_pred ECCCC------hHHHHHHHHHhcCCCEEEE
Confidence 75432 3467889999999998776
No 370
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=52.38 E-value=1.9 Score=39.19 Aligned_cols=71 Identities=13% Similarity=-0.018 Sum_probs=44.8
Q ss_pred hcCCceeeccCc-CCccccCCCCCCCeEEEEeCCHHHHHhcCCCCcEEEeccCCCCCCCCCCCCeeEEEecc
Q 022305 136 KYYSEVFPPSNT-PGVSHFPPGYKQDRIVGMGMNEEELKRNPVLTEYVVQDLNLNPKLPFEDNSFDVITNVV 206 (299)
Q Consensus 136 ~~~~~vLDiGcG-~G~~~~~~~~~~~~v~gvD~S~~ml~~a~~~~~~~~~D~~~~~~lpf~~~~FD~Vis~~ 206 (299)
....+||=+||| .|...........+|+..|.+..-++.+++....+..|+...+.+.-.-...|+|++..
T Consensus 14 g~~mkilvlGaG~vG~~~~~~L~~~~~v~~~~~~~~~~~~~~~~~~~~~~d~~d~~~l~~~~~~~DvVi~~~ 85 (365)
T 3abi_A 14 GRHMKVLILGAGNIGRAIAWDLKDEFDVYIGDVNNENLEKVKEFATPLKVDASNFDKLVEVMKEFELVIGAL 85 (365)
T ss_dssp --CCEEEEECCSHHHHHHHHHHTTTSEEEEEESCHHHHHHHTTTSEEEECCTTCHHHHHHHHTTCSEEEECC
T ss_pred CCccEEEEECCCHHHHHHHHHHhcCCCeEEEEcCHHHHHHHhccCCcEEEecCCHHHHHHHHhCCCEEEEec
Confidence 334579999997 44311111113468999999999999988888888888732112211114589999764
No 371
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=51.88 E-value=12 Score=33.23 Aligned_cols=91 Identities=9% Similarity=-0.010 Sum_probs=53.3
Q ss_pred cCCceeeccCcCCc---cccCCCCCCCeEEEEeCCHHHHHhcCCCCcEEEeccCCCCCC----C--CCCCCeeEEEeccc
Q 022305 137 YYSEVFPPSNTPGV---SHFPPGYKQDRIVGMGMNEEELKRNPVLTEYVVQDLNLNPKL----P--FEDNSFDVITNVVS 207 (299)
Q Consensus 137 ~~~~vLDiGcG~G~---~~~~~~~~~~~v~gvD~S~~ml~~a~~~~~~~~~D~~~~~~l----p--f~~~~FD~Vis~~~ 207 (299)
..++||=.|+|++. ..++....+.+|+++|.+++-++.+++.---...|... ++. . .....+|.++....
T Consensus 163 ~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~Ga~~~i~~~~-~~~~~~v~~~t~g~g~d~~~~~~~ 241 (348)
T 4eez_A 163 PGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGADVTINSGD-VNPVDEIKKITGGLGVQSAIVCAV 241 (348)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHHTTCSEEEEC-C-CCHHHHHHHHTTSSCEEEEEECCS
T ss_pred CCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhhcCCeEEEeCCC-CCHHHHhhhhcCCCCceEEEEecc
Confidence 34678888887432 12222345789999999999887776642111222210 111 0 12234676664322
Q ss_pred ccccCCHHHHHHHHHhhccCCcEEEEE
Q 022305 208 VDYLTKPIEVFKEMCQVLKPGGLAIVS 234 (299)
Q Consensus 208 l~~~~d~~~~l~ei~rvLkpGG~lii~ 234 (299)
-...+....+.|+++|.+++.
T Consensus 242 ------~~~~~~~~~~~l~~~G~~v~~ 262 (348)
T 4eez_A 242 ------ARIAFEQAVASLKPMGKMVAV 262 (348)
T ss_dssp ------CHHHHHHHHHTEEEEEEEEEC
T ss_pred ------CcchhheeheeecCCceEEEE
Confidence 245778889999999977653
No 372
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=51.81 E-value=1.1 Score=40.72 Aligned_cols=89 Identities=12% Similarity=0.028 Sum_probs=51.6
Q ss_pred cCCceeeccCcCCccccCC---CCCCCeEEEEeCCHHHHHhcCCC-CcEEEeccCCCC-CC--CCCCCCeeEEEeccccc
Q 022305 137 YYSEVFPPSNTPGVSHFPP---GYKQDRIVGMGMNEEELKRNPVL-TEYVVQDLNLNP-KL--PFEDNSFDVITNVVSVD 209 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~~~~~---~~~~~~v~gvD~S~~ml~~a~~~-~~~~~~D~~~~~-~l--pf~~~~FD~Vis~~~l~ 209 (299)
...+||-.|+| |.+.+.. ...+++|+++|.|++-++.+++. .+.+ .|... + ++ ... +.+|+|+....-.
T Consensus 179 ~g~~VlV~GaG-~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~lGa~~v-~~~~~-~~~~~~~~~-~~~D~vid~~g~~ 254 (360)
T 1piw_A 179 PGKKVGIVGLG-GIGSMGTLISKAMGAETYVISRSSRKREDAMKMGADHY-IATLE-EGDWGEKYF-DTFDLIVVCASSL 254 (360)
T ss_dssp TTCEEEEECCS-HHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEE-EEGGG-TSCHHHHSC-SCEEEEEECCSCS
T ss_pred CCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCCEE-EcCcC-chHHHHHhh-cCCCEEEECCCCC
Confidence 34689999984 3333221 12367899999998877766542 2222 22210 1 11 011 4799999664430
Q ss_pred ccCCHHHHHHHHHhhccCCcEEEE
Q 022305 210 YLTKPIEVFKEMCQVLKPGGLAIV 233 (299)
Q Consensus 210 ~~~d~~~~l~ei~rvLkpGG~lii 233 (299)
....+++..+.|+|||.+++
T Consensus 255 ----~~~~~~~~~~~l~~~G~iv~ 274 (360)
T 1piw_A 255 ----TDIDFNIMPKAMKVGGRIVS 274 (360)
T ss_dssp ----TTCCTTTGGGGEEEEEEEEE
T ss_pred ----cHHHHHHHHHHhcCCCEEEE
Confidence 01234667889999998765
No 373
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=51.62 E-value=4.8 Score=36.47 Aligned_cols=88 Identities=17% Similarity=0.169 Sum_probs=53.0
Q ss_pred CCceeeccCcCCccccCC---CCCCC-eEEEEeCCHHHHHhcCCC-CcEEEeccCC-CCCC-----CCCCCCeeEEEecc
Q 022305 138 YSEVFPPSNTPGVSHFPP---GYKQD-RIVGMGMNEEELKRNPVL-TEYVVQDLNL-NPKL-----PFEDNSFDVITNVV 206 (299)
Q Consensus 138 ~~~vLDiGcG~G~~~~~~---~~~~~-~v~gvD~S~~ml~~a~~~-~~~~~~D~~~-~~~l-----pf~~~~FD~Vis~~ 206 (299)
-++||-.|+| |.+.+.. ...++ +|+++|.+++-++.+++. .+.+ .|... .+++ ...++.+|+|+-..
T Consensus 192 g~~VlV~GaG-~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~v-i~~~~~~~~~~~~i~~~t~gg~Dvvid~~ 269 (373)
T 1p0f_A 192 GSTCAVFGLG-GVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATEC-LNPKDYDKPIYEVICEKTNGGVDYAVECA 269 (373)
T ss_dssp TCEEEEECCS-HHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSEE-ECGGGCSSCHHHHHHHHTTSCBSEEEECS
T ss_pred CCEEEEECCC-HHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcEE-EecccccchHHHHHHHHhCCCCCEEEECC
Confidence 4678889875 3333221 11355 899999999888877653 2222 22210 0011 01123799998654
Q ss_pred cccccCCHHHHHHHHHhhccCC-cEEEE
Q 022305 207 SVDYLTKPIEVFKEMCQVLKPG-GLAIV 233 (299)
Q Consensus 207 ~l~~~~d~~~~l~ei~rvLkpG-G~lii 233 (299)
.- ...+++..+.|++| |.+++
T Consensus 270 g~------~~~~~~~~~~l~~~~G~iv~ 291 (373)
T 1p0f_A 270 GR------IETMMNALQSTYCGSGVTVV 291 (373)
T ss_dssp CC------HHHHHHHHHTBCTTTCEEEE
T ss_pred CC------HHHHHHHHHHHhcCCCEEEE
Confidence 32 35678899999999 98765
No 374
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=50.76 E-value=2.5 Score=38.29 Aligned_cols=87 Identities=17% Similarity=0.179 Sum_probs=53.0
Q ss_pred CCceeeccCcCCccccC---CCCCCCeEEEEeCCHHHHHhcCCC-CcEEEeccCCCCCCC------CCCCCeeEEEeccc
Q 022305 138 YSEVFPPSNTPGVSHFP---PGYKQDRIVGMGMNEEELKRNPVL-TEYVVQDLNLNPKLP------FEDNSFDVITNVVS 207 (299)
Q Consensus 138 ~~~vLDiGcG~G~~~~~---~~~~~~~v~gvD~S~~ml~~a~~~-~~~~~~D~~~~~~lp------f~~~~FD~Vis~~~ 207 (299)
..+||-.|+| |.+.+. ....+++|+++|.+++-++.+++. .+.+. |- ..+.+. .....+|+|+....
T Consensus 190 g~~VlV~G~G-~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi-~~-~~~~~~~~v~~~~~g~g~D~vid~~g 266 (363)
T 3uog_A 190 GDRVVVQGTG-GVALFGLQIAKATGAEVIVTSSSREKLDRAFALGADHGI-NR-LEEDWVERVYALTGDRGADHILEIAG 266 (363)
T ss_dssp TCEEEEESSB-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTCSEEE-ET-TTSCHHHHHHHHHTTCCEEEEEEETT
T ss_pred CCEEEEECCC-HHHHHHHHHHHHcCCEEEEEecCchhHHHHHHcCCCEEE-cC-CcccHHHHHHHHhCCCCceEEEECCC
Confidence 3678888865 332221 122467999999999888877653 22222 21 001111 12347999997654
Q ss_pred ccccCCHHHHHHHHHhhccCCcEEEEE
Q 022305 208 VDYLTKPIEVFKEMCQVLKPGGLAIVS 234 (299)
Q Consensus 208 l~~~~d~~~~l~ei~rvLkpGG~lii~ 234 (299)
- ..+.+..+.|+|||.+++.
T Consensus 267 ~-------~~~~~~~~~l~~~G~iv~~ 286 (363)
T 3uog_A 267 G-------AGLGQSLKAVAPDGRISVI 286 (363)
T ss_dssp S-------SCHHHHHHHEEEEEEEEEE
T ss_pred h-------HHHHHHHHHhhcCCEEEEE
Confidence 1 2467888999999977653
No 375
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=49.70 E-value=16 Score=27.66 Aligned_cols=97 Identities=11% Similarity=0.003 Sum_probs=54.5
Q ss_pred CceeeccCc-CCcccc-CCCCCCCeEEEEeCCHHHHHhcCC-CCcEEEeccCCCCCCC-CCCCCeeEEEecccccccCCH
Q 022305 139 SEVFPPSNT-PGVSHF-PPGYKQDRIVGMGMNEEELKRNPV-LTEYVVQDLNLNPKLP-FEDNSFDVITNVVSVDYLTKP 214 (299)
Q Consensus 139 ~~vLDiGcG-~G~~~~-~~~~~~~~v~gvD~S~~ml~~a~~-~~~~~~~D~~~~~~lp-f~~~~FD~Vis~~~l~~~~d~ 214 (299)
.+++=+|+| .|.... .....+.+|+++|.+++.++...+ ...++.+|....+.+. ..-..+|+|+.... -.+.
T Consensus 7 ~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~~d~vi~~~~---~~~~ 83 (141)
T 3llv_A 7 YEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSKEKIELLEDEGFDAVIADPTDESFYRSLDLEGVSAVLITGS---DDEF 83 (141)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEECCTTCHHHHHHSCCTTCSEEEECCS---CHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHCCCcEEECCCCCHHHHHhCCcccCCEEEEecC---CHHH
Confidence 468888887 332111 111236799999999998876543 4678888873211111 12346898886543 0112
Q ss_pred HHHHHHHHhhccCCcEEEEEecCcc
Q 022305 215 IEVFKEMCQVLKPGGLAIVSFSNRC 239 (299)
Q Consensus 215 ~~~l~ei~rvLkpGG~lii~~~~~~ 239 (299)
...+....+-+. ...++....+..
T Consensus 84 n~~~~~~a~~~~-~~~iia~~~~~~ 107 (141)
T 3llv_A 84 NLKILKALRSVS-DVYAIVRVSSPK 107 (141)
T ss_dssp HHHHHHHHHHHC-CCCEEEEESCGG
T ss_pred HHHHHHHHHHhC-CceEEEEEcChh
Confidence 233445555565 566666555543
No 376
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=48.85 E-value=5.1 Score=36.18 Aligned_cols=84 Identities=14% Similarity=0.078 Sum_probs=51.8
Q ss_pred CCceeeccCcCCccccCC---CCCCCeEEEEeCCH---HHHHhcCCC-CcEEEeccCCCCCCC--C--CCCCeeEEEecc
Q 022305 138 YSEVFPPSNTPGVSHFPP---GYKQDRIVGMGMNE---EELKRNPVL-TEYVVQDLNLNPKLP--F--EDNSFDVITNVV 206 (299)
Q Consensus 138 ~~~vLDiGcG~G~~~~~~---~~~~~~v~gvD~S~---~ml~~a~~~-~~~~~~D~~~~~~lp--f--~~~~FD~Vis~~ 206 (299)
.++||-.|+ .|.+.+.. ...+++|+++|.++ +-++.+++. .+.+ | . ..+. . ..+.+|+|+.+.
T Consensus 181 g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~~~ga~~v--~-~--~~~~~~~~~~~~~~d~vid~~ 254 (366)
T 2cdc_A 181 CRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEETKTNYY--N-S--SNGYDKLKDSVGKFDVIIDAT 254 (366)
T ss_dssp TCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHHHHHTCEEE--E-C--TTCSHHHHHHHCCEEEEEECC
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHHHHhCCcee--c-h--HHHHHHHHHhCCCCCEEEECC
Confidence 467898998 34433321 12357999999997 666665542 3333 3 2 2111 0 014699999765
Q ss_pred cccccCCHHHHH-HHHHhhccCCcEEEE
Q 022305 207 SVDYLTKPIEVF-KEMCQVLKPGGLAIV 233 (299)
Q Consensus 207 ~l~~~~d~~~~l-~ei~rvLkpGG~lii 233 (299)
... ..+ ++..+.|++||.+++
T Consensus 255 g~~------~~~~~~~~~~l~~~G~iv~ 276 (366)
T 2cdc_A 255 GAD------VNILGNVIPLLGRNGVLGL 276 (366)
T ss_dssp CCC------THHHHHHGGGEEEEEEEEE
T ss_pred CCh------HHHHHHHHHHHhcCCEEEE
Confidence 432 245 888999999998765
No 377
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=48.60 E-value=7 Score=35.43 Aligned_cols=88 Identities=13% Similarity=0.178 Sum_probs=53.8
Q ss_pred CCceeeccCcCCccccCC---CCCCC-eEEEEeCCHHHHHhcCCC-CcEEEeccCC-CCCC-----CCCCCCeeEEEecc
Q 022305 138 YSEVFPPSNTPGVSHFPP---GYKQD-RIVGMGMNEEELKRNPVL-TEYVVQDLNL-NPKL-----PFEDNSFDVITNVV 206 (299)
Q Consensus 138 ~~~vLDiGcG~G~~~~~~---~~~~~-~v~gvD~S~~ml~~a~~~-~~~~~~D~~~-~~~l-----pf~~~~FD~Vis~~ 206 (299)
-.+||=.|+| |.+.+.. ...++ +|+++|.+++-++.+++. .+. ..|... ...+ ...++.+|+|+-..
T Consensus 194 g~~VlV~GaG-~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~lGa~~-vi~~~~~~~~~~~~i~~~~~gg~D~vid~~ 271 (378)
T 3uko_A 194 GSNVAIFGLG-TVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVNE-FVNPKDHDKPIQEVIVDLTDGGVDYSFECI 271 (378)
T ss_dssp TCCEEEECCS-HHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTTTCCE-EECGGGCSSCHHHHHHHHTTSCBSEEEECS
T ss_pred CCEEEEECCC-HHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCcE-EEccccCchhHHHHHHHhcCCCCCEEEECC
Confidence 4678888885 3323221 12355 899999999999888764 222 222210 0111 11234799998654
Q ss_pred cccccCCHHHHHHHHHhhccCC-cEEEE
Q 022305 207 SVDYLTKPIEVFKEMCQVLKPG-GLAIV 233 (299)
Q Consensus 207 ~l~~~~d~~~~l~ei~rvLkpG-G~lii 233 (299)
. -...+++..+.|++| |.+++
T Consensus 272 g------~~~~~~~~~~~l~~g~G~iv~ 293 (378)
T 3uko_A 272 G------NVSVMRAALECCHKGWGTSVI 293 (378)
T ss_dssp C------CHHHHHHHHHTBCTTTCEEEE
T ss_pred C------CHHHHHHHHHHhhccCCEEEE
Confidence 3 235688999999997 97765
No 378
>3trk_A Nonstructural polyprotein; hydrolase; 2.40A {Chikungunya virus}
Probab=48.36 E-value=6.4 Score=34.65 Aligned_cols=42 Identities=17% Similarity=0.317 Sum_probs=27.2
Q ss_pred CCCCCCeeEEEeccc----ccccC---CH----HHHHHHHHhhccCCcEEEEE
Q 022305 193 PFEDNSFDVITNVVS----VDYLT---KP----IEVFKEMCQVLKPGGLAIVS 234 (299)
Q Consensus 193 pf~~~~FD~Vis~~~----l~~~~---d~----~~~l~ei~rvLkpGG~lii~ 234 (299)
|-.-+.||+|+++.- .||.. |- .-.-....+.|||||.+++.
T Consensus 206 P~~~grYDlVfvNv~TpyR~HHYQQCeDHA~~l~mL~~~al~~L~pGGtlv~~ 258 (324)
T 3trk_A 206 PATLGRYDLVVINIHTPFRIHHYQQCVDHAMKLQMLGGDSLRLLKPGGSLLIR 258 (324)
T ss_dssp CGGGCCEEEEEEECCCCCCSSHHHHHHHHHHHHHHHHHHGGGGEEEEEEEEEE
T ss_pred CCcCCceeEEEEecCCccccchHHHHHHHHHHHHHHHHHHHhhcCCCceEEEE
Confidence 433478999998733 44543 22 22334578899999987764
No 379
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=48.10 E-value=5.7 Score=36.18 Aligned_cols=88 Identities=13% Similarity=0.121 Sum_probs=52.3
Q ss_pred CCceeeccCcCCccccC---CCCCC-CeEEEEeCCHHHHHhcCCC-CcEEEeccCC--CCC----C-C-CCCCCeeEEEe
Q 022305 138 YSEVFPPSNTPGVSHFP---PGYKQ-DRIVGMGMNEEELKRNPVL-TEYVVQDLNL--NPK----L-P-FEDNSFDVITN 204 (299)
Q Consensus 138 ~~~vLDiGcG~G~~~~~---~~~~~-~~v~gvD~S~~ml~~a~~~-~~~~~~D~~~--~~~----l-p-f~~~~FD~Vis 204 (299)
..+||-.|+| |.+.+. ....+ .+|+++|.|++-++.+++. .+.+ .|... .+. + . .....+|+|+-
T Consensus 196 g~~VlV~GaG-~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~v-i~~~~~~~~~~~~~v~~~~~g~g~Dvvid 273 (380)
T 1vj0_A 196 GKTVVIQGAG-PLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADLT-LNRRETSVEERRKAIMDITHGRGADFILE 273 (380)
T ss_dssp TCEEEEECCS-HHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTCSEE-EETTTSCHHHHHHHHHHHTTTSCEEEEEE
T ss_pred CCEEEEECcC-HHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHcCCcEE-EeccccCcchHHHHHHHHhCCCCCcEEEE
Confidence 3578888855 332221 11235 5999999999988877653 2222 22200 001 1 0 11236999996
Q ss_pred cccccccCCHHHHHHHHHhhccCCcEEEE
Q 022305 205 VVSVDYLTKPIEVFKEMCQVLKPGGLAIV 233 (299)
Q Consensus 205 ~~~l~~~~d~~~~l~ei~rvLkpGG~lii 233 (299)
...- ...+++..+.|+|||.+++
T Consensus 274 ~~g~------~~~~~~~~~~l~~~G~iv~ 296 (380)
T 1vj0_A 274 ATGD------SRALLEGSELLRRGGFYSV 296 (380)
T ss_dssp CSSC------TTHHHHHHHHEEEEEEEEE
T ss_pred CCCC------HHHHHHHHHHHhcCCEEEE
Confidence 6432 2357888999999997765
No 380
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=47.86 E-value=7.4 Score=35.71 Aligned_cols=87 Identities=9% Similarity=0.032 Sum_probs=49.6
Q ss_pred CceeeccCcCCccccCC---CCCCC-eEEEEeCCHHHHHhcCCC-CcEEEeccCCCCCCC------CCCCCeeEEEeccc
Q 022305 139 SEVFPPSNTPGVSHFPP---GYKQD-RIVGMGMNEEELKRNPVL-TEYVVQDLNLNPKLP------FEDNSFDVITNVVS 207 (299)
Q Consensus 139 ~~vLDiGcG~G~~~~~~---~~~~~-~v~gvD~S~~ml~~a~~~-~~~~~~D~~~~~~lp------f~~~~FD~Vis~~~ 207 (299)
.+||=.|+| |.+.+.. ...++ +|+++|.+++-++.+++. .+.+ .|... +.+. .....+|+|+-...
T Consensus 215 ~~VlV~GaG-~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~v-i~~~~-~~~~~~i~~~t~g~g~D~vid~~g 291 (404)
T 3ip1_A 215 DNVVILGGG-PIGLAAVAILKHAGASKVILSEPSEVRRNLAKELGADHV-IDPTK-ENFVEAVLDYTNGLGAKLFLEATG 291 (404)
T ss_dssp CEEEEECCS-HHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEE-ECTTT-SCHHHHHHHHTTTCCCSEEEECSS
T ss_pred CEEEEECCC-HHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEE-EcCCC-CCHHHHHHHHhCCCCCCEEEECCC
Confidence 568888875 3333221 12355 899999999988877653 2222 22200 1110 12346999985532
Q ss_pred ccccCCHHHHHHHHHhhc----cCCcEEEE
Q 022305 208 VDYLTKPIEVFKEMCQVL----KPGGLAIV 233 (299)
Q Consensus 208 l~~~~d~~~~l~ei~rvL----kpGG~lii 233 (299)
.....+..+.+.| ++||.+++
T Consensus 292 -----~~~~~~~~~~~~l~~~~~~~G~iv~ 316 (404)
T 3ip1_A 292 -----VPQLVWPQIEEVIWRARGINATVAI 316 (404)
T ss_dssp -----CHHHHHHHHHHHHHHCSCCCCEEEE
T ss_pred -----CcHHHHHHHHHHHHhccCCCcEEEE
Confidence 3333445555555 99998776
No 381
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=47.24 E-value=9.2 Score=37.64 Aligned_cols=92 Identities=13% Similarity=0.165 Sum_probs=54.8
Q ss_pred CceeeccCcCCccccCC--------------CCCCCeEEEEeC---CHHHHHhcCC------------------------
Q 022305 139 SEVFPPSNTPGVSHFPP--------------GYKQDRIVGMGM---NEEELKRNPV------------------------ 177 (299)
Q Consensus 139 ~~vLDiGcG~G~~~~~~--------------~~~~~~v~gvD~---S~~ml~~a~~------------------------ 177 (299)
-+|+|+|-|+|...+.. ....-++++++. +++.++++-.
T Consensus 68 ~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 147 (676)
T 3ps9_A 68 FVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPGCH 147 (676)
T ss_dssp EEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCCCCSEEE
T ss_pred eEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCcccCCCce
Confidence 37999999999722211 111246899998 7777762211
Q ss_pred ---------CCcEEEeccCCCCCCCC-C---CCCeeEEEecccccccCCH----HHHHHHHHhhccCCcEEEE
Q 022305 178 ---------LTEYVVQDLNLNPKLPF-E---DNSFDVITNVVSVDYLTKP----IEVFKEMCQVLKPGGLAIV 233 (299)
Q Consensus 178 ---------~~~~~~~D~~~~~~lpf-~---~~~FD~Vis~~~l~~~~d~----~~~l~ei~rvLkpGG~lii 233 (299)
.++...+|+. +.++- . +..||+++.-. +-.-.+| ..+|+++.+++||||.+.-
T Consensus 148 ~~~~~~~~~~l~l~~gd~~--~~l~~~~~~~~~~~d~~~~D~-f~p~~np~~w~~~~~~~l~~~~~~g~~~~t 217 (676)
T 3ps9_A 148 RLLLDAGRVTLDLWFGDIN--ELTSQLDDSLNQKVDAWFLDG-FAPAKNPDMWTQNLFNAMARLARPGGTLAT 217 (676)
T ss_dssp EEEEGGGTEEEEEEESCHH--HHGGGBCGGGTTCEEEEEECC-SCGGGCGGGSCHHHHHHHHHHEEEEEEEEE
T ss_pred EEEecCCcEEEEEecCCHH--HHHHhcccccCCcccEEEECC-CCCcCChhhhhHHHHHHHHHHhCCCCEEEe
Confidence 0224445552 22331 1 46799998632 1111122 6789999999999997653
No 382
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=46.33 E-value=4.8 Score=39.87 Aligned_cols=92 Identities=14% Similarity=0.177 Sum_probs=55.1
Q ss_pred CceeeccCcCCccccCC--------------CCCCCeEEEEeC---CHHHHHhcCC------------------------
Q 022305 139 SEVFPPSNTPGVSHFPP--------------GYKQDRIVGMGM---NEEELKRNPV------------------------ 177 (299)
Q Consensus 139 ~~vLDiGcG~G~~~~~~--------------~~~~~~v~gvD~---S~~ml~~a~~------------------------ 177 (299)
-+|+|+|-|+|...+.. .....+++.++. +.+.+.++-.
T Consensus 60 ~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 139 (689)
T 3pvc_A 60 CIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLAGCH 139 (689)
T ss_dssp EEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCSEEE
T ss_pred eEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCCCce
Confidence 47999999999722211 111246899998 6555553110
Q ss_pred ---------CCcEEEeccCCCCCCC-CC---CCCeeEEEeccc-ccccCC--HHHHHHHHHhhccCCcEEE
Q 022305 178 ---------LTEYVVQDLNLNPKLP-FE---DNSFDVITNVVS-VDYLTK--PIEVFKEMCQVLKPGGLAI 232 (299)
Q Consensus 178 ---------~~~~~~~D~~~~~~lp-f~---~~~FD~Vis~~~-l~~~~d--~~~~l~ei~rvLkpGG~li 232 (299)
.++++.+|+. +.++ +. +..||+++.-.. -..-++ -..+|.++.++++|||.+.
T Consensus 140 r~~~~~~~~~l~l~~gd~~--~~l~~~~~~~~~~~da~flD~f~p~~np~~w~~~~~~~l~~~~~~g~~~~ 208 (689)
T 3pvc_A 140 RILLADGAITLDLWFGDVN--TLLPTLDDSLNNQVDAWFLDGFAPAKNPDMWNEQLFNAMARMTRPGGTFS 208 (689)
T ss_dssp EEEETTTTEEEEEEESCHH--HHGGGCCGGGTTCEEEEEECSSCC--CCTTCSHHHHHHHHHHEEEEEEEE
T ss_pred EEEecCCcEEEEEEccCHH--HHHhhcccccCCceeEEEECCCCCCCChhhhhHHHHHHHHHHhCCCCEEE
Confidence 1345666763 3333 21 478999986321 111122 1689999999999999764
No 383
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=45.81 E-value=15 Score=32.74 Aligned_cols=65 Identities=11% Similarity=0.056 Sum_probs=41.8
Q ss_pred CCCeEEEEeCCHHHHHhcCCC-CcEEEeccCCCCCCCCC--------CCCeeEEEecccccccCCHHHHHHHHHhhccCC
Q 022305 158 KQDRIVGMGMNEEELKRNPVL-TEYVVQDLNLNPKLPFE--------DNSFDVITNVVSVDYLTKPIEVFKEMCQVLKPG 228 (299)
Q Consensus 158 ~~~~v~gvD~S~~ml~~a~~~-~~~~~~D~~~~~~lpf~--------~~~FD~Vis~~~l~~~~d~~~~l~ei~rvLkpG 228 (299)
.+++|+++|.+++-++.+++. .+. ..|. ....+. ...+|+|+.+..- ..+.+..+.|++|
T Consensus 188 ~Ga~Vi~~~~~~~~~~~~~~~Ga~~-~~~~---~~~~~~~~v~~~~~~~g~D~vid~~g~-------~~~~~~~~~l~~~ 256 (349)
T 3pi7_A 188 EGFRPIVTVRRDEQIALLKDIGAAH-VLNE---KAPDFEATLREVMKAEQPRIFLDAVTG-------PLASAIFNAMPKR 256 (349)
T ss_dssp HTCEEEEEESCGGGHHHHHHHTCSE-EEET---TSTTHHHHHHHHHHHHCCCEEEESSCH-------HHHHHHHHHSCTT
T ss_pred CCCEEEEEeCCHHHHHHHHHcCCCE-EEEC---CcHHHHHHHHHHhcCCCCcEEEECCCC-------hhHHHHHhhhcCC
Confidence 367999999999888776653 222 2232 111111 1369999976542 2347788999999
Q ss_pred cEEEE
Q 022305 229 GLAIV 233 (299)
Q Consensus 229 G~lii 233 (299)
|.+++
T Consensus 257 G~iv~ 261 (349)
T 3pi7_A 257 ARWII 261 (349)
T ss_dssp CEEEE
T ss_pred CEEEE
Confidence 98776
No 384
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=45.36 E-value=5.4 Score=36.05 Aligned_cols=88 Identities=16% Similarity=0.213 Sum_probs=52.7
Q ss_pred CCceeeccCcCCccccCC---CCCCC-eEEEEeCCHHHHHhcCCC-CcEEEeccCC-CCCC-----CCCCCCeeEEEecc
Q 022305 138 YSEVFPPSNTPGVSHFPP---GYKQD-RIVGMGMNEEELKRNPVL-TEYVVQDLNL-NPKL-----PFEDNSFDVITNVV 206 (299)
Q Consensus 138 ~~~vLDiGcG~G~~~~~~---~~~~~-~v~gvD~S~~ml~~a~~~-~~~~~~D~~~-~~~l-----pf~~~~FD~Vis~~ 206 (299)
-++||-.|+| |.+.+.. ...++ +|+++|.|++-++.+++. .+.+ .|... .+.+ ...++.+|+|+-..
T Consensus 191 g~~VlV~GaG-~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~v-i~~~~~~~~~~~~v~~~~~~g~D~vid~~ 268 (373)
T 2fzw_A 191 GSVCAVFGLG-GVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATEC-INPQDFSKPIQEVLIEMTDGGVDYSFECI 268 (373)
T ss_dssp TCEEEEECCS-HHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSEE-ECGGGCSSCHHHHHHHHTTSCBSEEEECS
T ss_pred CCEEEEECCC-HHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceE-eccccccccHHHHHHHHhCCCCCEEEECC
Confidence 4578888875 3333221 11355 899999999888877653 2222 22210 0011 01123699998654
Q ss_pred cccccCCHHHHHHHHHhhccCC-cEEEE
Q 022305 207 SVDYLTKPIEVFKEMCQVLKPG-GLAIV 233 (299)
Q Consensus 207 ~l~~~~d~~~~l~ei~rvLkpG-G~lii 233 (299)
.- ...+++..+.|+|| |.+++
T Consensus 269 g~------~~~~~~~~~~l~~~~G~iv~ 290 (373)
T 2fzw_A 269 GN------VKVMRAALEACHKGWGVSVV 290 (373)
T ss_dssp CC------HHHHHHHHHTBCTTTCEEEE
T ss_pred Cc------HHHHHHHHHhhccCCcEEEE
Confidence 32 35678899999999 98765
No 385
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=44.78 E-value=8.2 Score=34.42 Aligned_cols=87 Identities=17% Similarity=0.197 Sum_probs=53.5
Q ss_pred CCceeeccCcCCccccCC---CCC--CCeEEEEeCCHHHHHhcCCC-CcEEEeccCC----CCCCCCCCCCeeEEEeccc
Q 022305 138 YSEVFPPSNTPGVSHFPP---GYK--QDRIVGMGMNEEELKRNPVL-TEYVVQDLNL----NPKLPFEDNSFDVITNVVS 207 (299)
Q Consensus 138 ~~~vLDiGcG~G~~~~~~---~~~--~~~v~gvD~S~~ml~~a~~~-~~~~~~D~~~----~~~lpf~~~~FD~Vis~~~ 207 (299)
.++||-.|+| |.+.+.. ... +++|+++|.|++-++.+++. .+.+. |... ...+. ....+|+|+....
T Consensus 171 g~~VlV~GaG-~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi-~~~~~~~~~~~~~-~g~g~D~vid~~g 247 (344)
T 2h6e_A 171 EPVVIVNGIG-GLAVYTIQILKALMKNITIVGISRSKKHRDFALELGADYVS-EMKDAESLINKLT-DGLGASIAIDLVG 247 (344)
T ss_dssp SCEEEEECCS-HHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHTCSEEE-CHHHHHHHHHHHH-TTCCEEEEEESSC
T ss_pred CCEEEEECCC-HHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHHhCCCEEe-ccccchHHHHHhh-cCCCccEEEECCC
Confidence 4679999985 4433221 112 78999999999888877653 22211 2100 01111 1236999997644
Q ss_pred ccccCCHHHHHHHHHhhccCCcEEEE
Q 022305 208 VDYLTKPIEVFKEMCQVLKPGGLAIV 233 (299)
Q Consensus 208 l~~~~d~~~~l~ei~rvLkpGG~lii 233 (299)
- ...+++..+.|+|||.+++
T Consensus 248 ~------~~~~~~~~~~l~~~G~iv~ 267 (344)
T 2h6e_A 248 T------EETTYNLGKLLAQEGAIIL 267 (344)
T ss_dssp C------HHHHHHHHHHEEEEEEEEE
T ss_pred C------hHHHHHHHHHhhcCCEEEE
Confidence 2 3467889999999998765
No 386
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=44.42 E-value=7.3 Score=36.06 Aligned_cols=90 Identities=11% Similarity=0.088 Sum_probs=49.9
Q ss_pred cccCcchhhccccHH----HHHHhhhc----CCceeeccCcCCc------cccCCCC----CCCeEEEEeCCHHHHHhcC
Q 022305 115 LFYETPRFVTHIDDP----AIAALTKY----YSEVFPPSNTPGV------SHFPPGY----KQDRIVGMGMNEEELKRNP 176 (299)
Q Consensus 115 ~~y~~~~~~~~l~~~----~~~~l~~~----~~~vLDiGcG~G~------~~~~~~~----~~~~v~gvD~S~~ml~~a~ 176 (299)
.|+..|.+.+.+.+. +.+.+... .-.|+++|.|.|+ ..+. .. ...+++-||+|+...+.-+
T Consensus 50 DF~Tapeis~~FGe~la~~~~~~w~~~g~p~~~~ivElGaG~GtLa~diL~~l~-~~p~~~~~~~y~iVE~Sp~Lr~~Q~ 128 (387)
T 1zkd_A 50 DFTTSPEISQMFGELLGLWSASVWKAADEPQTLRLIEIGPGRGTMMADALRALR-VLPILYQSLSVHLVEINPVLRQKQQ 128 (387)
T ss_dssp -CCSHHHHCHHHHHHHHHHHHHHHHHTTCCSSEEEEEECCTTSHHHHHHHHHHT-TSHHHHTTEEEEEECCCHHHHHHHH
T ss_pred CeeCCCchHHHHHHHHHHHHHHHHHHcCCCCCcEEEEECCCcchHHHHHHHHHH-hCCccccccEEEEEecCHHHHHHHH
Confidence 388887665544332 22222221 1259999999997 1111 11 2358999999998875433
Q ss_pred CC------CcEEEeccCCCCCCCCCCCCeeEEEecccccccC
Q 022305 177 VL------TEYVVQDLNLNPKLPFEDNSFDVITNVVSVDYLT 212 (299)
Q Consensus 177 ~~------~~~~~~D~~~~~~lpf~~~~FD~Vis~~~l~~~~ 212 (299)
+. +.|. .++ +++|. + .=+|+++.++.-++
T Consensus 129 ~~L~~~~~v~W~-~~l---~~lp~--~-~~~viANE~fDAlP 163 (387)
T 1zkd_A 129 TLLAGIRNIHWH-DSF---EDVPE--G-PAVILANEYFDVLP 163 (387)
T ss_dssp HHSTTCSSEEEE-SSG---GGSCC--S-SEEEEEESSGGGSC
T ss_pred HHhcCCCCeEEe-CCh---hhcCC--C-CeEEEeccccccCc
Confidence 21 2222 233 34442 2 45777887776664
No 387
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=44.26 E-value=6.5 Score=35.18 Aligned_cols=84 Identities=14% Similarity=0.147 Sum_probs=52.7
Q ss_pred CCceeeccCcCCccccC---CCCCCCeEEEEeCCHHHHHhcCCC-CcEEEeccCCCCCCC------CCCCCeeEEEeccc
Q 022305 138 YSEVFPPSNTPGVSHFP---PGYKQDRIVGMGMNEEELKRNPVL-TEYVVQDLNLNPKLP------FEDNSFDVITNVVS 207 (299)
Q Consensus 138 ~~~vLDiGcG~G~~~~~---~~~~~~~v~gvD~S~~ml~~a~~~-~~~~~~D~~~~~~lp------f~~~~FD~Vis~~~ 207 (299)
-++||-.|++.|.+.+. ....+++|+++ .+++-++.+++. .+.+. +- +.+. .....+|+|+.+..
T Consensus 151 g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~~~lGa~~i~-~~---~~~~~~~~~~~~~~g~D~vid~~g 225 (343)
T 3gaz_A 151 GQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYVRDLGATPID-AS---REPEDYAAEHTAGQGFDLVYDTLG 225 (343)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHHHHHTSEEEE-TT---SCHHHHHHHHHTTSCEEEEEESSC
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHHHHcCCCEec-cC---CCHHHHHHHHhcCCCceEEEECCC
Confidence 45788888544443322 12246799999 888888777653 33322 21 2221 12346999987643
Q ss_pred ccccCCHHHHHHHHHhhccCCcEEEE
Q 022305 208 VDYLTKPIEVFKEMCQVLKPGGLAIV 233 (299)
Q Consensus 208 l~~~~d~~~~l~ei~rvLkpGG~lii 233 (299)
- ..+.+..+.|+++|.+++
T Consensus 226 ~-------~~~~~~~~~l~~~G~iv~ 244 (343)
T 3gaz_A 226 G-------PVLDASFSAVKRFGHVVS 244 (343)
T ss_dssp T-------HHHHHHHHHEEEEEEEEE
T ss_pred c-------HHHHHHHHHHhcCCeEEE
Confidence 1 467888999999998775
No 388
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=43.88 E-value=2.1 Score=38.82 Aligned_cols=64 Identities=11% Similarity=0.074 Sum_probs=42.6
Q ss_pred CceeeccCcCCccccCCCCCC---CeEEEEeCCHHHHHhcCC---CCcEEEeccCCCCCCC---CCCCCeeEEEec
Q 022305 139 SEVFPPSNTPGVSHFPPGYKQ---DRIVGMGMNEEELKRNPV---LTEYVVQDLNLNPKLP---FEDNSFDVITNV 205 (299)
Q Consensus 139 ~~vLDiGcG~G~~~~~~~~~~---~~v~gvD~S~~ml~~a~~---~~~~~~~D~~~~~~lp---f~~~~FD~Vis~ 205 (299)
-+++|+-||.|...+.....+ ..+.++|+++...+.-+. ...++..|+ .++. ++...+|+++..
T Consensus 4 ~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~~~~~~~~~DI---~~~~~~~~~~~~~D~l~gg 76 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNFPETNLLNRNI---QQLTPQVIKKWNVDTILMS 76 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTTSCEECCCG---GGCCHHHHHHTTCCEEEEC
T ss_pred CEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhCCCCceecccc---ccCCHHHhccCCCCEEEec
Confidence 378999999886444433333 357899999999875443 255777888 5553 223368999954
No 389
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=43.40 E-value=3.4 Score=37.23 Aligned_cols=64 Identities=6% Similarity=-0.105 Sum_probs=40.1
Q ss_pred CceeeccCcCCccccCCCCCCC-eEEEEeCCHHHHHhcCCC-CcEEEeccCCCCCCCC-CCCCeeEEEec
Q 022305 139 SEVFPPSNTPGVSHFPPGYKQD-RIVGMGMNEEELKRNPVL-TEYVVQDLNLNPKLPF-EDNSFDVITNV 205 (299)
Q Consensus 139 ~~vLDiGcG~G~~~~~~~~~~~-~v~gvD~S~~ml~~a~~~-~~~~~~D~~~~~~lpf-~~~~FD~Vis~ 205 (299)
.+++|+-||+|...+.....+. .+.++|+++..++..+.+ -....+|+ .++.. .-..+|+|+..
T Consensus 12 ~~~~dLFaG~Gg~~~g~~~aG~~~v~~~e~d~~a~~t~~~N~~~~~~~Di---~~~~~~~~~~~D~l~~g 78 (327)
T 2c7p_A 12 LRFIDLFAGLGGFRLALESCGAECVYSNEWDKYAQEVYEMNFGEKPEGDI---TQVNEKTIPDHDILCAG 78 (327)
T ss_dssp CEEEEETCTTTHHHHHHHHTTCEEEEEECCCHHHHHHHHHHHSCCCBSCG---GGSCGGGSCCCSEEEEE
T ss_pred CcEEEECCCcCHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCCCcCCH---HHcCHhhCCCCCEEEEC
Confidence 4799999999874444333344 577899999998754432 11125777 44421 11258999954
No 390
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=42.55 E-value=6.7 Score=35.52 Aligned_cols=87 Identities=15% Similarity=0.125 Sum_probs=48.5
Q ss_pred CceeeccCcCCccccC---CCCCCCeEEEEeCCHHHHHhcCCC-CcEEEeccCCCCCCC---CCCCCeeEEEeccccccc
Q 022305 139 SEVFPPSNTPGVSHFP---PGYKQDRIVGMGMNEEELKRNPVL-TEYVVQDLNLNPKLP---FEDNSFDVITNVVSVDYL 211 (299)
Q Consensus 139 ~~vLDiGcG~G~~~~~---~~~~~~~v~gvD~S~~ml~~a~~~-~~~~~~D~~~~~~lp---f~~~~FD~Vis~~~l~~~ 211 (299)
++||=.|+..|.+.+. ....+++|++++ +++-++.+++. .+.+ .|... +++. .....+|+|+....
T Consensus 185 ~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~~~~~~~~~~lGa~~v-~~~~~-~~~~~~~~~~~g~D~vid~~g---- 257 (375)
T 2vn8_A 185 KRVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQDASELVRKLGADDV-IDYKS-GSVEEQLKSLKPFDFILDNVG---- 257 (375)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHHHTTCSEE-EETTS-SCHHHHHHTSCCBSEEEESSC----
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEe-ChHHHHHHHHcCCCEE-EECCc-hHHHHHHhhcCCCCEEEECCC----
Confidence 5688888433433321 112467899999 66666666543 2222 23210 1110 01146999986543
Q ss_pred CCHHHHHHHHHhhccCCcEEEE
Q 022305 212 TKPIEVFKEMCQVLKPGGLAIV 233 (299)
Q Consensus 212 ~d~~~~l~ei~rvLkpGG~lii 233 (299)
.....+.+..+.|++||.++.
T Consensus 258 -~~~~~~~~~~~~l~~~G~iv~ 278 (375)
T 2vn8_A 258 -GSTETWAPDFLKKWSGATYVT 278 (375)
T ss_dssp -TTHHHHGGGGBCSSSCCEEEE
T ss_pred -ChhhhhHHHHHhhcCCcEEEE
Confidence 222356778889999998765
No 391
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=42.46 E-value=2.9 Score=37.92 Aligned_cols=89 Identities=11% Similarity=0.058 Sum_probs=50.3
Q ss_pred cCCceeeccCcCCccccC---CCCCCCeEEEEeCCHHHHHhcC-CC-CcEEEeccCCCCCCCCCCCCeeEEEeccccccc
Q 022305 137 YYSEVFPPSNTPGVSHFP---PGYKQDRIVGMGMNEEELKRNP-VL-TEYVVQDLNLNPKLPFEDNSFDVITNVVSVDYL 211 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~~~~---~~~~~~~v~gvD~S~~ml~~a~-~~-~~~~~~D~~~~~~lpf~~~~FD~Vis~~~l~~~ 211 (299)
...+||=.|+| |.+.+. ....+++|+++|.+++-++.+. +. .+. ..|....+.+.-..+.+|+|+.......
T Consensus 187 ~g~~VlV~GaG-~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lGa~~-v~~~~~~~~~~~~~~~~D~vid~~g~~~- 263 (366)
T 1yqd_A 187 PGKHIGIVGLG-GLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGADS-FLVSRDQEQMQAAAGTLDGIIDTVSAVH- 263 (366)
T ss_dssp TTCEEEEECCS-HHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTSCCSE-EEETTCHHHHHHTTTCEEEEEECCSSCC-
T ss_pred CCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCce-EEeccCHHHHHHhhCCCCEEEECCCcHH-
Confidence 34678888875 332221 1124679999999988776654 32 222 2232100011101136999997654321
Q ss_pred CCHHHHHHHHHhhccCCcEEEE
Q 022305 212 TKPIEVFKEMCQVLKPGGLAIV 233 (299)
Q Consensus 212 ~d~~~~l~ei~rvLkpGG~lii 233 (299)
.+++..+.|++||.++.
T Consensus 264 -----~~~~~~~~l~~~G~iv~ 280 (366)
T 1yqd_A 264 -----PLLPLFGLLKSHGKLIL 280 (366)
T ss_dssp -----CSHHHHHHEEEEEEEEE
T ss_pred -----HHHHHHHHHhcCCEEEE
Confidence 24567789999997765
No 392
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=38.47 E-value=4.4 Score=35.99 Aligned_cols=64 Identities=11% Similarity=0.024 Sum_probs=42.2
Q ss_pred CceeeccCcCCccccCCCCCCCe---EEEEeCCHHHHHhcCC---CCcEEEeccCCCCCCCC---C-CCCeeEEEec
Q 022305 139 SEVFPPSNTPGVSHFPPGYKQDR---IVGMGMNEEELKRNPV---LTEYVVQDLNLNPKLPF---E-DNSFDVITNV 205 (299)
Q Consensus 139 ~~vLDiGcG~G~~~~~~~~~~~~---v~gvD~S~~ml~~a~~---~~~~~~~D~~~~~~lpf---~-~~~FD~Vis~ 205 (299)
.+++|+=||.|...+.....+.+ +.++|+++...+.-+. ...++.+|+ .++.. + ...+|+++..
T Consensus 17 ~~vidLFaG~GG~~~g~~~aG~~~~~v~a~E~d~~a~~ty~~N~~~~~~~~~DI---~~i~~~~i~~~~~~Dll~gg 90 (295)
T 2qrv_A 17 IRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVRHQGKIMYVGDV---RSVTQKHIQEWGPFDLVIGG 90 (295)
T ss_dssp EEEEEETCTTTHHHHHHHHTTBCEEEEEEECCCHHHHHHHHHHTTTCEEEECCG---GGCCHHHHHHTCCCSEEEEC
T ss_pred CEEEEeCcCccHHHHHHHHCCCccceEEEEECCHHHHHHHHHhCCCCceeCCCh---HHccHHHhcccCCcCEEEec
Confidence 47999999988644443334443 5899999998764332 245788898 55531 1 1369999954
No 393
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=38.30 E-value=18 Score=32.03 Aligned_cols=91 Identities=9% Similarity=0.047 Sum_probs=52.7
Q ss_pred cCCceeeccCcC-Cc--cccCCCCCCCeEEEEeCCHHHHHhcCCCCcEEEeccCCCCCCC------CCCCCeeEEEeccc
Q 022305 137 YYSEVFPPSNTP-GV--SHFPPGYKQDRIVGMGMNEEELKRNPVLTEYVVQDLNLNPKLP------FEDNSFDVITNVVS 207 (299)
Q Consensus 137 ~~~~vLDiGcG~-G~--~~~~~~~~~~~v~gvD~S~~ml~~a~~~~~~~~~D~~~~~~lp------f~~~~FD~Vis~~~ 207 (299)
.-.+||=.|+|. |. ..++.......++++|.+++-++.+++.---...|... ...+ -....+|+|+....
T Consensus 160 ~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~lGa~~~i~~~~-~~~~~~~~~~~~~~g~d~v~d~~G 238 (346)
T 4a2c_A 160 ENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGAMQTFNSSE-MSAPQMQSVLRELRFNQLILETAG 238 (346)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEETTT-SCHHHHHHHHGGGCSSEEEEECSC
T ss_pred CCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHcCCeEEEeCCC-CCHHHHHHhhcccCCccccccccc
Confidence 346788888862 21 11222223346789999999888877651111222210 1111 12345788875532
Q ss_pred ccccCCHHHHHHHHHhhccCCcEEEEE
Q 022305 208 VDYLTKPIEVFKEMCQVLKPGGLAIVS 234 (299)
Q Consensus 208 l~~~~d~~~~l~ei~rvLkpGG~lii~ 234 (299)
-...++...++|++||.+++.
T Consensus 239 ------~~~~~~~~~~~l~~~G~~v~~ 259 (346)
T 4a2c_A 239 ------VPQTVELAVEIAGPHAQLALV 259 (346)
T ss_dssp ------SHHHHHHHHHHCCTTCEEEEC
T ss_pred ------ccchhhhhhheecCCeEEEEE
Confidence 245678889999999987763
No 394
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=38.00 E-value=13 Score=32.75 Aligned_cols=87 Identities=16% Similarity=0.144 Sum_probs=48.1
Q ss_pred cCCceeecc-CcCCccccC---CCCCCCeEEEEeCCHHHHHhcCCC-CcEEEeccCCCCC-CCCCCCCeeEEEecccccc
Q 022305 137 YYSEVFPPS-NTPGVSHFP---PGYKQDRIVGMGMNEEELKRNPVL-TEYVVQDLNLNPK-LPFEDNSFDVITNVVSVDY 210 (299)
Q Consensus 137 ~~~~vLDiG-cG~G~~~~~---~~~~~~~v~gvD~S~~ml~~a~~~-~~~~~~D~~~~~~-lpf~~~~FD~Vis~~~l~~ 210 (299)
.-.+||=.| +| |.+.+. ....+++|++++ +++-++.+++. .+. ..|... .. +.-.-..+|+|+-...-
T Consensus 152 ~g~~vlV~Ga~G-~vG~~a~q~a~~~Ga~vi~~~-~~~~~~~~~~lGa~~-~i~~~~-~~~~~~~~~g~D~v~d~~g~-- 225 (321)
T 3tqh_A 152 QGDVVLIHAGAG-GVGHLAIQLAKQKGTTVITTA-SKRNHAFLKALGAEQ-CINYHE-EDFLLAISTPVDAVIDLVGG-- 225 (321)
T ss_dssp TTCEEEESSTTS-HHHHHHHHHHHHTTCEEEEEE-CHHHHHHHHHHTCSE-EEETTT-SCHHHHCCSCEEEEEESSCH--
T ss_pred CCCEEEEEcCCc-HHHHHHHHHHHHcCCEEEEEe-ccchHHHHHHcCCCE-EEeCCC-cchhhhhccCCCEEEECCCc--
Confidence 345788776 44 332221 122467899998 44446666543 222 223210 11 11111469999865431
Q ss_pred cCCHHHHHHHHHhhccCCcEEEEE
Q 022305 211 LTKPIEVFKEMCQVLKPGGLAIVS 234 (299)
Q Consensus 211 ~~d~~~~l~ei~rvLkpGG~lii~ 234 (299)
..+.+..+.|++||.++.-
T Consensus 226 -----~~~~~~~~~l~~~G~iv~~ 244 (321)
T 3tqh_A 226 -----DVGIQSIDCLKETGCIVSV 244 (321)
T ss_dssp -----HHHHHHGGGEEEEEEEEEC
T ss_pred -----HHHHHHHHhccCCCEEEEe
Confidence 2347889999999987763
No 395
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=37.74 E-value=15 Score=28.42 Aligned_cols=98 Identities=11% Similarity=-0.087 Sum_probs=54.3
Q ss_pred CceeeccCc-CCcccc-CCCCCCCeEEEEeCCHHHHHhcC-C-CCcEEEeccCCCCCCC-CCCCCeeEEEecccccccCC
Q 022305 139 SEVFPPSNT-PGVSHF-PPGYKQDRIVGMGMNEEELKRNP-V-LTEYVVQDLNLNPKLP-FEDNSFDVITNVVSVDYLTK 213 (299)
Q Consensus 139 ~~vLDiGcG-~G~~~~-~~~~~~~~v~gvD~S~~ml~~a~-~-~~~~~~~D~~~~~~lp-f~~~~FD~Vis~~~l~~~~d 213 (299)
.+|+=+|+| .|.... .....+.+|+++|.+++-++.++ . ....+.+|....+.+. ..-..+|+|+....- +.
T Consensus 20 ~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~g~~~~~~d~~~~~~l~~~~~~~ad~Vi~~~~~---~~ 96 (155)
T 2g1u_A 20 KYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEYAFHRLNSEFSGFTVVGDAAEFETLKECGMEKADMVFAFTND---DS 96 (155)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCTTCCSEEEESCTTSHHHHHTTTGGGCSEEEECSSC---HH
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHhcCCCcEEEecCCCHHHHHHcCcccCCEEEEEeCC---cH
Confidence 578888987 343111 11113579999999998887765 3 3556666651101111 112458988876321 12
Q ss_pred HHHHHHHHHhhccCCcEEEEEecCcc
Q 022305 214 PIEVFKEMCQVLKPGGLAIVSFSNRC 239 (299)
Q Consensus 214 ~~~~l~ei~rvLkpGG~lii~~~~~~ 239 (299)
....+.++.+.+.|...++....+..
T Consensus 97 ~~~~~~~~~~~~~~~~~iv~~~~~~~ 122 (155)
T 2g1u_A 97 TNFFISMNARYMFNVENVIARVYDPE 122 (155)
T ss_dssp HHHHHHHHHHHTSCCSEEEEECSSGG
T ss_pred HHHHHHHHHHHHCCCCeEEEEECCHH
Confidence 23444555555666666666655544
No 396
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=37.26 E-value=23 Score=31.40 Aligned_cols=89 Identities=19% Similarity=0.154 Sum_probs=52.1
Q ss_pred CceeeccCc-CCccc-cCCCCCCC--eEEEEeCCHHHHHhcCCC--CcEEEeccCCCCCCCCCCCCeeEEEecccccccC
Q 022305 139 SEVFPPSNT-PGVSH-FPPGYKQD--RIVGMGMNEEELKRNPVL--TEYVVQDLNLNPKLPFEDNSFDVITNVVSVDYLT 212 (299)
Q Consensus 139 ~~vLDiGcG-~G~~~-~~~~~~~~--~v~gvD~S~~ml~~a~~~--~~~~~~D~~~~~~lpf~~~~FD~Vis~~~l~~~~ 212 (299)
.+|.=+|+| -|... ......+. +|+++|.+++.++.+.+. +.-...|. ..+ .-...|+|+..--..
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G~~~~~~~~~---~~~--~~~~aDvVilavp~~--- 105 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSI---AKV--EDFSPDFVMLSSPVR--- 105 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCT---TGG--GGGCCSEEEECSCGG---
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCCCcchhcCCH---HHH--hhccCCEEEEeCCHH---
Confidence 567888887 33211 11111233 899999999888776543 21222333 220 123479988764333
Q ss_pred CHHHHHHHHHhhccCCcEEEEEec
Q 022305 213 KPIEVFKEMCQVLKPGGLAIVSFS 236 (299)
Q Consensus 213 d~~~~l~ei~rvLkpGG~lii~~~ 236 (299)
....+++++...|+||.. ++++.
T Consensus 106 ~~~~vl~~l~~~l~~~~i-v~d~~ 128 (314)
T 3ggo_A 106 TFREIAKKLSYILSEDAT-VTDQG 128 (314)
T ss_dssp GHHHHHHHHHHHSCTTCE-EEECC
T ss_pred HHHHHHHHHhhccCCCcE-EEECC
Confidence 356788999999998864 45443
No 397
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=36.09 E-value=17 Score=32.84 Aligned_cols=88 Identities=11% Similarity=0.113 Sum_probs=51.0
Q ss_pred cCCceeeccCcCCccccC---CCCCCCeEEEEeCCHHHHHhcCCC-CcEEEeccCCCCCC-----CCCCCCeeEEEeccc
Q 022305 137 YYSEVFPPSNTPGVSHFP---PGYKQDRIVGMGMNEEELKRNPVL-TEYVVQDLNLNPKL-----PFEDNSFDVITNVVS 207 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~~~~---~~~~~~~v~gvD~S~~ml~~a~~~-~~~~~~D~~~~~~l-----pf~~~~FD~Vis~~~ 207 (299)
...+||=.|++.|.+.+. ....+++|+++. |++-++.+++. .+.+ .|... +++ ...++.+|+|+-...
T Consensus 164 ~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~~~~~lGa~~v-i~~~~-~~~~~~v~~~t~g~~d~v~d~~g 240 (371)
T 3gqv_A 164 KPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFDLAKSRGAEEV-FDYRA-PNLAQTIRTYTKNNLRYALDCIT 240 (371)
T ss_dssp SCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHHHTTCSEE-EETTS-TTHHHHHHHHTTTCCCEEEESSC
T ss_pred CCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHHHHHHcCCcEE-EECCC-chHHHHHHHHccCCccEEEECCC
Confidence 345688888754443332 122467899885 88777777654 2222 22210 111 012345999986543
Q ss_pred ccccCCHHHHHHHHHhhc-cCCcEEEE
Q 022305 208 VDYLTKPIEVFKEMCQVL-KPGGLAIV 233 (299)
Q Consensus 208 l~~~~d~~~~l~ei~rvL-kpGG~lii 233 (299)
- ...++...+.| ++||.++.
T Consensus 241 ~------~~~~~~~~~~l~~~~G~iv~ 261 (371)
T 3gqv_A 241 N------VESTTFCFAAIGRAGGHYVS 261 (371)
T ss_dssp S------HHHHHHHHHHSCTTCEEEEE
T ss_pred c------hHHHHHHHHHhhcCCCEEEE
Confidence 2 35677888889 69998765
No 398
>4gua_A Non-structural polyprotein; viral precursor polyprotein, protease, zinc-binding, hydrola; HET: MES; 2.85A {Sindbis virus}
Probab=35.48 E-value=15 Score=35.74 Aligned_cols=42 Identities=17% Similarity=0.334 Sum_probs=27.5
Q ss_pred CCCCCCCeeEEEecc----cccccC---CH----HHHHHHHHhhccCCcEEEEE
Q 022305 192 LPFEDNSFDVITNVV----SVDYLT---KP----IEVFKEMCQVLKPGGLAIVS 234 (299)
Q Consensus 192 lpf~~~~FD~Vis~~----~l~~~~---d~----~~~l~ei~rvLkpGG~lii~ 234 (299)
+|- +..||+|+.+- -.||.. |- .-.-....+.|||||.+++.
T Consensus 216 ~p~-~~ryDlvfvn~~t~yr~HHyqQCeDHa~~l~ml~~~al~~l~pGGt~v~~ 268 (670)
T 4gua_A 216 FPP-QARYDLVFINIGTKYRNHHFQQCEDHAATLKTLSRSALNCLNPGGTLVVK 268 (670)
T ss_dssp CCC-CCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred CCC-CCcccEEEEecCCCcccchHHHHHHHHHHHHHHhHHHHhhcCCCceEEEE
Confidence 443 46899999873 345553 21 22335678899999988764
No 399
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=35.40 E-value=1.6 Score=39.80 Aligned_cols=91 Identities=16% Similarity=0.198 Sum_probs=48.5
Q ss_pred CceeeccCc-CCc--cccCCCCCCCeEEEEeCCHHHHHhcCCC----CcEEEeccCCCCCCCCCCCCeeEEEeccccccc
Q 022305 139 SEVFPPSNT-PGV--SHFPPGYKQDRIVGMGMNEEELKRNPVL----TEYVVQDLNLNPKLPFEDNSFDVITNVVSVDYL 211 (299)
Q Consensus 139 ~~vLDiGcG-~G~--~~~~~~~~~~~v~gvD~S~~ml~~a~~~----~~~~~~D~~~~~~lpf~~~~FD~Vis~~~l~~~ 211 (299)
.+|+=+|+| .|. ...... .+++|+.+|.+++-++.+.+. +.....+. +.+.-.-..+|+|+..-.....
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~-~Ga~V~v~dr~~~r~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~DvVI~~~~~~~~ 243 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVG-LGAQVQIFDINVERLSYLETLFGSRVELLYSNS---AEIETAVAEADLLIGAVLVPGR 243 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHGGGSEEEECCH---HHHHHHHHTCSEEEECCCCTTS
T ss_pred CEEEEECCCHHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHhhCceeEeeeCCH---HHHHHHHcCCCEEEECCCcCCC
Confidence 578888886 332 111222 356999999998876655331 21221111 1111001258999976544332
Q ss_pred CCHHHHHHHHHhhccCCcEEEE
Q 022305 212 TKPIEVFKEMCQVLKPGGLAIV 233 (299)
Q Consensus 212 ~d~~~~l~ei~rvLkpGG~lii 233 (299)
..+.-+.+++.+.+||||.++-
T Consensus 244 ~~~~li~~~~~~~~~~g~~ivd 265 (361)
T 1pjc_A 244 RAPILVPASLVEQMRTGSVIVD 265 (361)
T ss_dssp SCCCCBCHHHHTTSCTTCEEEE
T ss_pred CCCeecCHHHHhhCCCCCEEEE
Confidence 1222124566788999996654
No 400
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=32.96 E-value=8.8 Score=33.99 Aligned_cols=91 Identities=14% Similarity=0.069 Sum_probs=53.9
Q ss_pred ceeeccCcCCccccCCCCCCC-eEEEEeCCHHHHHhcCC--CCcEEEeccCCCCCCCC-CCCCeeEEEeccccc------
Q 022305 140 EVFPPSNTPGVSHFPPGYKQD-RIVGMGMNEEELKRNPV--LTEYVVQDLNLNPKLPF-EDNSFDVITNVVSVD------ 209 (299)
Q Consensus 140 ~vLDiGcG~G~~~~~~~~~~~-~v~gvD~S~~ml~~a~~--~~~~~~~D~~~~~~lpf-~~~~FD~Vis~~~l~------ 209 (299)
+++|+=||+|...+.....+. -+.++|+++.+.+.-+. ..+++.+|+ .++.. +-..+|+++...=.+
T Consensus 2 kvidLFsG~GG~~~G~~~aG~~~v~a~e~d~~a~~ty~~N~~~~~~~~DI---~~i~~~~~~~~D~l~ggpPCQ~fS~ag 78 (331)
T 3ubt_Y 2 NLISLFSGAGGLDLGFQKAGFRIICANEYDKSIWKTYESNHSAKLIKGDI---SKISSDEFPKCDGIIGGPPSQSWSEGG 78 (331)
T ss_dssp EEEEESCTTCHHHHHHHHTTCEEEEEEECCTTTHHHHHHHCCSEEEESCG---GGCCGGGSCCCSEEECCCCGGGTEETT
T ss_pred eEEEeCcCccHHHHHHHHCCCEEEEEEeCCHHHHHHHHHHCCCCcccCCh---hhCCHhhCCcccEEEecCCCCCcCCCC
Confidence 689999998864443333344 46689999988874333 356788898 55532 123589998542111
Q ss_pred ---ccCCHH-HHHHHH---HhhccCCcEEEEE
Q 022305 210 ---YLTKPI-EVFKEM---CQVLKPGGLAIVS 234 (299)
Q Consensus 210 ---~~~d~~-~~l~ei---~rvLkpGG~lii~ 234 (299)
-+.|+. ..+.++ .+.+||. +++++
T Consensus 79 ~~~g~~d~R~~L~~~~~r~i~~~~Pk-~~~~E 109 (331)
T 3ubt_Y 79 SLRGIDDPRGKLFYEYIRILKQKKPI-FFLAE 109 (331)
T ss_dssp EECCTTCGGGHHHHHHHHHHHHHCCS-EEEEE
T ss_pred CccCCCCchhHHHHHHHHHHhccCCe-EEEee
Confidence 234543 344444 4445775 55565
No 401
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=32.43 E-value=14 Score=32.75 Aligned_cols=24 Identities=29% Similarity=0.609 Sum_probs=19.3
Q ss_pred CHHHHHHHHHhhccCCcEE-EEEec
Q 022305 213 KPIEVFKEMCQVLKPGGLA-IVSFS 236 (299)
Q Consensus 213 d~~~~l~ei~rvLkpGG~l-ii~~~ 236 (299)
.+..+|..+.++|+|||.+ ||+|.
T Consensus 211 ~L~~~L~~a~~~L~~gGrl~visfH 235 (285)
T 1wg8_A 211 ALKEFLEQAAEVLAPGGRLVVIAFH 235 (285)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEECS
T ss_pred HHHHHHHHHHHHhcCCCEEEEEecC
Confidence 4678899999999999966 55655
No 402
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=30.94 E-value=22 Score=33.27 Aligned_cols=59 Identities=15% Similarity=0.164 Sum_probs=35.7
Q ss_pred cccCcchhhccccHH----HHHHhhhc-CCceeeccCcCCc------cccCC-CCCCCeEEEEeCCHHHHH
Q 022305 115 LFYETPRFVTHIDDP----AIAALTKY-YSEVFPPSNTPGV------SHFPP-GYKQDRIVGMGMNEEELK 173 (299)
Q Consensus 115 ~~y~~~~~~~~l~~~----~~~~l~~~-~~~vLDiGcG~G~------~~~~~-~~~~~~v~gvD~S~~ml~ 173 (299)
.|+..|.+-+.+.+. +.+.+... ...|+|+|.|.|+ ..+.. .....+++-||+|+.+.+
T Consensus 110 DFiTAPeiS~~FGe~la~~~~~~~~~~g~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~Sp~Lr~ 180 (432)
T 4f3n_A 110 DFVTAPELSPLFAQTLARPVAQALDASGTRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDLSGELRA 180 (432)
T ss_dssp CCSSCGGGHHHHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECTTSSSHH
T ss_pred CccCchhhhHHHHHHHHHHHHHHHHhcCCCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEcCHHHHH
Confidence 488888765554332 22333222 2589999999997 11111 111348999999987754
No 403
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=30.93 E-value=14 Score=33.50 Aligned_cols=25 Identities=36% Similarity=0.565 Sum_probs=19.4
Q ss_pred CHHHHHHHHHhhccCCcEE-EEEecC
Q 022305 213 KPIEVFKEMCQVLKPGGLA-IVSFSN 237 (299)
Q Consensus 213 d~~~~l~ei~rvLkpGG~l-ii~~~~ 237 (299)
.+..+|..+.++|||||.+ ||+|..
T Consensus 252 ~L~~~L~~a~~~L~~gGRl~VISFHS 277 (347)
T 3tka_A 252 EIEQALKSSLNVLAPGGRLSIISFHS 277 (347)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEESSH
T ss_pred HHHHHHHHHHHHhCCCCEEEEEecCc
Confidence 4578899999999999965 556553
No 404
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=30.77 E-value=31 Score=31.95 Aligned_cols=97 Identities=11% Similarity=-0.042 Sum_probs=59.6
Q ss_pred CceeeccCc-CCcccc-CCCCCCCeEEEEeCCHHHHHhcCC-CCcEEEeccCCCCCCC-CCCCCeeEEEecccccccCCH
Q 022305 139 SEVFPPSNT-PGVSHF-PPGYKQDRIVGMGMNEEELKRNPV-LTEYVVQDLNLNPKLP-FEDNSFDVITNVVSVDYLTKP 214 (299)
Q Consensus 139 ~~vLDiGcG-~G~~~~-~~~~~~~~v~gvD~S~~ml~~a~~-~~~~~~~D~~~~~~lp-f~~~~FD~Vis~~~l~~~~d~ 214 (299)
.+|+=+|+| .|.... .....+..|+.+|.+++.++.+++ .+.++.+|....+.|. ..-...|+|++...= +..
T Consensus 5 ~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~~g~~vi~GDat~~~~L~~agi~~A~~viv~~~~---~~~ 81 (413)
T 3l9w_A 5 MRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLINAIDD---PQT 81 (413)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHHTTCCCEESCTTCHHHHHHTTTTTCSEEEECCSS---HHH
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHhCCCeEEEcCCCCHHHHHhcCCCccCEEEECCCC---hHH
Confidence 467778887 343111 111136789999999999987665 3778899983211111 223568888765311 122
Q ss_pred HHHHHHHHhhccCCcEEEEEecCc
Q 022305 215 IEVFKEMCQVLKPGGLAIVSFSNR 238 (299)
Q Consensus 215 ~~~l~ei~rvLkpGG~lii~~~~~ 238 (299)
...+....|-+.|+..++....+.
T Consensus 82 n~~i~~~ar~~~p~~~Iiara~~~ 105 (413)
T 3l9w_A 82 NLQLTEMVKEHFPHLQIIARARDV 105 (413)
T ss_dssp HHHHHHHHHHHCTTCEEEEEESSH
T ss_pred HHHHHHHHHHhCCCCeEEEEECCH
Confidence 345567778888998888766553
No 405
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=29.88 E-value=33 Score=30.45 Aligned_cols=85 Identities=14% Similarity=0.087 Sum_probs=45.0
Q ss_pred CCceeeccCcCCcccc----CCCCCCCeEEEEeCCHHHHHhcCCCCcEEEeccCCCCCCC-----CCCCCeeEEEecccc
Q 022305 138 YSEVFPPSNTPGVSHF----PPGYKQDRIVGMGMNEEELKRNPVLTEYVVQDLNLNPKLP-----FEDNSFDVITNVVSV 208 (299)
Q Consensus 138 ~~~vLDiGcG~G~~~~----~~~~~~~~v~gvD~S~~ml~~a~~~~~~~~~D~~~~~~lp-----f~~~~FD~Vis~~~l 208 (299)
.++||=.|++.|.+.+ +....+.+|++++ +++-++.++...+.+..+- ..+. ...+.+|+|+-...-
T Consensus 143 g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~-~~~~~~~~~~ga~~~~~~~---~~~~~~~~~~~~~g~Dvv~d~~g~ 218 (349)
T 4a27_A 143 GMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA-STFKHEAIKDSVTHLFDRN---ADYVQEVKRISAEGVDIVLDCLCG 218 (349)
T ss_dssp TCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEE-CGGGHHHHGGGSSEEEETT---SCHHHHHHHHCTTCEEEEEEECC-
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeC-CHHHHHHHHcCCcEEEcCC---ccHHHHHHHhcCCCceEEEECCCc
Confidence 4678888885444332 3333357899998 5554554442233222121 1111 123579999965432
Q ss_pred cccCCHHHHHHHHHhhccCCcEEEE
Q 022305 209 DYLTKPIEVFKEMCQVLKPGGLAIV 233 (299)
Q Consensus 209 ~~~~d~~~~l~ei~rvLkpGG~lii 233 (299)
. .+.+..+.|++||.+++
T Consensus 219 ~-------~~~~~~~~l~~~G~~v~ 236 (349)
T 4a27_A 219 D-------NTGKGLSLLKPLGTYIL 236 (349)
T ss_dssp -------------CTTEEEEEEEEE
T ss_pred h-------hHHHHHHHhhcCCEEEE
Confidence 2 23678899999998765
No 406
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=29.13 E-value=30 Score=28.63 Aligned_cols=97 Identities=8% Similarity=-0.135 Sum_probs=57.9
Q ss_pred CceeeccCc-CCcc--ccCCCCCCCeEEEEeCCHHHHHhcCCCCcEEEeccCCCCCCC-CCCCCeeEEEecccccccCCH
Q 022305 139 SEVFPPSNT-PGVS--HFPPGYKQDRIVGMGMNEEELKRNPVLTEYVVQDLNLNPKLP-FEDNSFDVITNVVSVDYLTKP 214 (299)
Q Consensus 139 ~~vLDiGcG-~G~~--~~~~~~~~~~v~gvD~S~~ml~~a~~~~~~~~~D~~~~~~lp-f~~~~FD~Vis~~~l~~~~d~ 214 (299)
.+++=+|+| .|.. ..... .+. |+++|.+++.++.....+.++.+|....+.+. ..-...|+|++...- +..
T Consensus 10 ~~viI~G~G~~G~~la~~L~~-~g~-v~vid~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~---d~~ 84 (234)
T 2aef_A 10 RHVVICGWSESTLECLRELRG-SEV-FVLAEDENVRKKVLRSGANFVHGDPTRVSDLEKANVRGARAVIVDLES---DSE 84 (234)
T ss_dssp CEEEEESCCHHHHHHHHHSTT-SEE-EEEESCGGGHHHHHHTTCEEEESCTTCHHHHHHTTCTTCSEEEECCSC---HHH
T ss_pred CEEEEECCChHHHHHHHHHHh-CCe-EEEEECCHHHHHHHhcCCeEEEcCCCCHHHHHhcCcchhcEEEEcCCC---cHH
Confidence 467888887 3421 11111 245 99999999877655455788899883211111 123467888876311 122
Q ss_pred HHHHHHHHhhccCCcEEEEEecCcch
Q 022305 215 IEVFKEMCQVLKPGGLAIVSFSNRCF 240 (299)
Q Consensus 215 ~~~l~ei~rvLkpGG~lii~~~~~~~ 240 (299)
...+....+-+.|+..++....+...
T Consensus 85 n~~~~~~a~~~~~~~~iia~~~~~~~ 110 (234)
T 2aef_A 85 TIHCILGIRKIDESVRIIAEAERYEN 110 (234)
T ss_dssp HHHHHHHHHHHCSSSEEEEECSSGGG
T ss_pred HHHHHHHHHHHCCCCeEEEEECCHhH
Confidence 34455677778888888887666443
No 407
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=28.81 E-value=5.7 Score=37.01 Aligned_cols=93 Identities=12% Similarity=0.208 Sum_probs=48.3
Q ss_pred CceeeccCc-CCc--cccCCCCCCCeEEEEeCCHHHHHhcCCC-CcEEEeccC----------CCCCCC----------C
Q 022305 139 SEVFPPSNT-PGV--SHFPPGYKQDRIVGMGMNEEELKRNPVL-TEYVVQDLN----------LNPKLP----------F 194 (299)
Q Consensus 139 ~~vLDiGcG-~G~--~~~~~~~~~~~v~gvD~S~~ml~~a~~~-~~~~~~D~~----------~~~~lp----------f 194 (299)
.+|+=+|+| .|. ...... .+++|+++|.++.-++.+.+. .+++..+.. ....++ +
T Consensus 191 ~kV~ViG~G~iG~~aa~~a~~-lGa~V~v~D~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~~~l 269 (405)
T 4dio_A 191 AKIFVMGAGVAGLQAIATARR-LGAVVSATDVRPAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQAALV 269 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-TTCEEEEECSSTTHHHHHHHTTCEECCCCC-----------------CHHHHHHHHHH
T ss_pred CEEEEECCcHHHHHHHHHHHH-CCCEEEEEcCCHHHHHHHHHcCCceeecccccccccccccchhhhcchhhhhhhHhHH
Confidence 467777877 343 112222 367999999999877665442 222221110 000010 0
Q ss_pred C--CCCeeEEEecccccccCCHHHHHHHHHhhccCCcEEE
Q 022305 195 E--DNSFDVITNVVSVDYLTKPIEVFKEMCQVLKPGGLAI 232 (299)
Q Consensus 195 ~--~~~FD~Vis~~~l~~~~d~~~~l~ei~rvLkpGG~li 232 (299)
. -...|+||....+.--..|.-+-+++.+.+|||..++
T Consensus 270 ~e~l~~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~GsVIV 309 (405)
T 4dio_A 270 AEHIAKQDIVITTALIPGRPAPRLVTREMLDSMKPGSVVV 309 (405)
T ss_dssp HHHHHTCSEEEECCCCSSSCCCCCBCHHHHTTSCTTCEEE
T ss_pred HHHhcCCCEEEECCcCCCCCCCEEecHHHHhcCCCCCEEE
Confidence 0 1357999975432221222223478889999888554
No 408
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=28.45 E-value=57 Score=23.90 Aligned_cols=96 Identities=11% Similarity=0.003 Sum_probs=51.8
Q ss_pred CceeeccCc-CCcccc-CCCCCCCeEEEEeCCHHHHHhcCC--CCcEEEeccCCCCCCC-CCCCCeeEEEecccccccCC
Q 022305 139 SEVFPPSNT-PGVSHF-PPGYKQDRIVGMGMNEEELKRNPV--LTEYVVQDLNLNPKLP-FEDNSFDVITNVVSVDYLTK 213 (299)
Q Consensus 139 ~~vLDiGcG-~G~~~~-~~~~~~~~v~gvD~S~~ml~~a~~--~~~~~~~D~~~~~~lp-f~~~~FD~Vis~~~l~~~~d 213 (299)
.+|+=+|+| .|.... .....+.+|+.+|.+++.++...+ .+.++.+|....+.+. ..-..+|+|+...--. +
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~---~ 81 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVTGKE---E 81 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECCSCH---H
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhcCcEEEEcCCCCHHHHHHcCcccCCEEEEeeCCc---h
Confidence 357777876 332111 011135789999999987765442 3556677762101111 1124689888763211 2
Q ss_pred HHHHHHHHHhhccCCcEEEEEecCc
Q 022305 214 PIEVFKEMCQVLKPGGLAIVSFSNR 238 (299)
Q Consensus 214 ~~~~l~ei~rvLkpGG~lii~~~~~ 238 (299)
....+.++.+.++++ .+++...+.
T Consensus 82 ~~~~~~~~~~~~~~~-~ii~~~~~~ 105 (140)
T 1lss_A 82 VNLMSSLLAKSYGIN-KTIARISEI 105 (140)
T ss_dssp HHHHHHHHHHHTTCC-CEEEECSST
T ss_pred HHHHHHHHHHHcCCC-EEEEEecCH
Confidence 234556667777775 555544443
No 409
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=27.64 E-value=90 Score=28.31 Aligned_cols=101 Identities=6% Similarity=0.046 Sum_probs=55.9
Q ss_pred cCCceeeccCcCCccccCCCCCCCeEEEEeCCHHHHHh-cCCCCcEEEeccCCCCCCCCCCCCeeEEEeccccc-ccCCH
Q 022305 137 YYSEVFPPSNTPGVSHFPPGYKQDRIVGMGMNEEELKR-NPVLTEYVVQDLNLNPKLPFEDNSFDVITNVVSVD-YLTKP 214 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~~~~~~~~~~~v~gvD~S~~ml~~-a~~~~~~~~~D~~~~~~lpf~~~~FD~Vis~~~l~-~~~d~ 214 (299)
...+||.++-+.|....... +..+++.+.-|--..+. .....+... . .........||+|+...-=+ .....
T Consensus 45 ~~~~~l~~n~~~g~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~--~---~~~~~~~~~~d~v~~~~Pk~k~~~~~ 118 (381)
T 3dmg_A 45 FGERALDLNPGVGWGSLPLE-GRMAVERLETSRAAFRCLTASGLQARL--A---LPWEAAAGAYDLVVLALPAGRGTAYV 118 (381)
T ss_dssp CSSEEEESSCTTSTTTGGGB-TTBEEEEEECBHHHHHHHHHTTCCCEE--C---CGGGSCTTCEEEEEEECCGGGCHHHH
T ss_pred hCCcEEEecCCCCccccccC-CCCceEEEeCcHHHHHHHHHcCCCccc--c---CCccCCcCCCCEEEEECCcchhHHHH
Confidence 33689999888775333322 24677777555433222 111122111 1 12223456799988653210 11124
Q ss_pred HHHHHHHHhhccCCcEEEEEecCcchHHH
Q 022305 215 IEVFKEMCQVLKPGGLAIVSFSNRCFWTK 243 (299)
Q Consensus 215 ~~~l~ei~rvLkpGG~lii~~~~~~~~~~ 243 (299)
...|.++.+.|+|||.+++.-.+......
T Consensus 119 ~~~l~~~~~~l~~g~~i~~~g~~~~g~~~ 147 (381)
T 3dmg_A 119 QASLVAAARALRMGGRLYLAGDKNKGFER 147 (381)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEEGGGTHHH
T ss_pred HHHHHHHHHhCCCCCEEEEEEccHHHHHH
Confidence 67788999999999998887555444433
No 410
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=27.33 E-value=2.2 Score=39.02 Aligned_cols=93 Identities=14% Similarity=0.134 Sum_probs=46.5
Q ss_pred CceeeccCc-CCc--cccCCCCCCCeEEEEeCCHHHHHhcCC-C-CcEEEeccCCCCCCCCCCCCeeEEEecccccccCC
Q 022305 139 SEVFPPSNT-PGV--SHFPPGYKQDRIVGMGMNEEELKRNPV-L-TEYVVQDLNLNPKLPFEDNSFDVITNVVSVDYLTK 213 (299)
Q Consensus 139 ~~vLDiGcG-~G~--~~~~~~~~~~~v~gvD~S~~ml~~a~~-~-~~~~~~D~~~~~~lpf~~~~FD~Vis~~~l~~~~d 213 (299)
.+|+=+|+| .|. .... ...+++|+++|.+++-++.+.+ . .. +..|......+.-.-..+|+|+.+........
T Consensus 167 ~~V~ViGaG~iG~~~a~~l-~~~Ga~V~~~d~~~~~~~~~~~~~g~~-~~~~~~~~~~l~~~~~~~DvVi~~~g~~~~~~ 244 (369)
T 2eez_A 167 ASVVILGGGTVGTNAAKIA-LGMGAQVTILDVNHKRLQYLDDVFGGR-VITLTATEANIKKSVQHADLLIGAVLVPGAKA 244 (369)
T ss_dssp CEEEEECCSHHHHHHHHHH-HHTTCEEEEEESCHHHHHHHHHHTTTS-EEEEECCHHHHHHHHHHCSEEEECCC------
T ss_pred CEEEEECCCHHHHHHHHHH-HhCCCEEEEEECCHHHHHHHHHhcCce-EEEecCCHHHHHHHHhCCCEEEECCCCCcccc
Confidence 467777775 222 1111 1236799999999987665432 1 22 22222000111100135899987654332111
Q ss_pred HHHHHHHHHhhccCCcEEEE
Q 022305 214 PIEVFKEMCQVLKPGGLAIV 233 (299)
Q Consensus 214 ~~~~l~ei~rvLkpGG~lii 233 (299)
+.-+.+++.+.+||||.++.
T Consensus 245 ~~li~~~~l~~mk~gg~iV~ 264 (369)
T 2eez_A 245 PKLVTRDMLSLMKEGAVIVD 264 (369)
T ss_dssp -CCSCHHHHTTSCTTCEEEE
T ss_pred chhHHHHHHHhhcCCCEEEE
Confidence 11234677888999997654
No 411
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=27.16 E-value=33 Score=28.16 Aligned_cols=75 Identities=19% Similarity=0.081 Sum_probs=46.2
Q ss_pred CceeeccCcCCccccC---CCCCCCeEEEEeCCHHHHHhcC-CCC-cEEEeccCCCCCCCCCCCCeeEEEecccccccCC
Q 022305 139 SEVFPPSNTPGVSHFP---PGYKQDRIVGMGMNEEELKRNP-VLT-EYVVQDLNLNPKLPFEDNSFDVITNVVSVDYLTK 213 (299)
Q Consensus 139 ~~vLDiGcG~G~~~~~---~~~~~~~v~gvD~S~~ml~~a~-~~~-~~~~~D~~~~~~lpf~~~~FD~Vis~~~l~~~~d 213 (299)
.+||=.|+..|.+... ....+.+|++++-++.-++... ..+ +++.+|+. +.+.-.-+..|+|+.+.......+
T Consensus 22 ~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~Dl~--~~~~~~~~~~D~vi~~ag~~~~~~ 99 (236)
T 3e8x_A 22 MRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRERGASDIVVANLE--EDFSHAFASIDAVVFAAGSGPHTG 99 (236)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHTTCSEEEECCTT--SCCGGGGTTCSEEEECCCCCTTSC
T ss_pred CeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHhCCCceEEEcccH--HHHHHHHcCCCEEEECCCCCCCCC
Confidence 4688888754442211 1114679999999987665432 357 89999984 333222246899998876654444
Q ss_pred HH
Q 022305 214 PI 215 (299)
Q Consensus 214 ~~ 215 (299)
+.
T Consensus 100 ~~ 101 (236)
T 3e8x_A 100 AD 101 (236)
T ss_dssp HH
T ss_pred cc
Confidence 43
No 412
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=26.91 E-value=30 Score=29.75 Aligned_cols=87 Identities=11% Similarity=0.076 Sum_probs=48.9
Q ss_pred CceeeccC-c-CCcccc-CCCCCCCeEEEEeCCHHHHHhcCCC-CcEEEeccCCCCCCCCCCCCeeEEEecccccccCCH
Q 022305 139 SEVFPPSN-T-PGVSHF-PPGYKQDRIVGMGMNEEELKRNPVL-TEYVVQDLNLNPKLPFEDNSFDVITNVVSVDYLTKP 214 (299)
Q Consensus 139 ~~vLDiGc-G-~G~~~~-~~~~~~~~v~gvD~S~~ml~~a~~~-~~~~~~D~~~~~~lpf~~~~FD~Vis~~~l~~~~d~ 214 (299)
.+|.=+|+ | -|.... .....+.+|+++|.+++.++...+. +.. .+. .. .-...|+|+...--.. .
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~--~~~---~~---~~~~aDvVi~av~~~~---~ 80 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQGMGIPL--TDG---DG---WIDEADVVVLALPDNI---I 80 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHHHTTCCC--CCS---SG---GGGTCSEEEECSCHHH---H
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHhcCCCc--CCH---HH---HhcCCCEEEEcCCchH---H
Confidence 46778888 7 332111 0111346899999998877654331 111 121 11 1235799887643332 4
Q ss_pred HHHHHHHHhhccCCcEEEEEecC
Q 022305 215 IEVFKEMCQVLKPGGLAIVSFSN 237 (299)
Q Consensus 215 ~~~l~ei~rvLkpGG~lii~~~~ 237 (299)
..+++++...++||. ++++..+
T Consensus 81 ~~v~~~l~~~l~~~~-ivv~~s~ 102 (286)
T 3c24_A 81 EKVAEDIVPRVRPGT-IVLILDA 102 (286)
T ss_dssp HHHHHHHGGGSCTTC-EEEESCS
T ss_pred HHHHHHHHHhCCCCC-EEEECCC
Confidence 677788888888765 4555443
No 413
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=26.79 E-value=38 Score=27.31 Aligned_cols=75 Identities=11% Similarity=0.203 Sum_probs=46.2
Q ss_pred CCCeEEEEeCCHHHHHhc-CCCCcEEEeccCCCCCCCCCCCCeeEEEecccccccCC----HHHHHHHHHhhccCC-cEE
Q 022305 158 KQDRIVGMGMNEEELKRN-PVLTEYVVQDLNLNPKLPFEDNSFDVITNVVSVDYLTK----PIEVFKEMCQVLKPG-GLA 231 (299)
Q Consensus 158 ~~~~v~gvD~S~~ml~~a-~~~~~~~~~D~~~~~~lpf~~~~FD~Vis~~~l~~~~d----~~~~l~ei~rvLkpG-G~l 231 (299)
.+.+|++++-++.-++.. ...++++.+|+...+. ..-+.+|+|+.+....+-++ .....+.+.+.++.. +.+
T Consensus 23 ~g~~V~~~~R~~~~~~~~~~~~~~~~~~D~~d~~~--~~~~~~d~vi~~ag~~~~~~~~~~n~~~~~~l~~a~~~~~~~~ 100 (224)
T 3h2s_A 23 RGHEVLAVVRDPQKAADRLGATVATLVKEPLVLTE--ADLDSVDAVVDALSVPWGSGRGYLHLDFATHLVSLLRNSDTLA 100 (224)
T ss_dssp TTCEEEEEESCHHHHHHHTCTTSEEEECCGGGCCH--HHHTTCSEEEECCCCCTTSSCTHHHHHHHHHHHHTCTTCCCEE
T ss_pred CCCEEEEEEecccccccccCCCceEEecccccccH--hhcccCCEEEECCccCCCcchhhHHHHHHHHHHHHHHHcCCcE
Confidence 367999999998877643 3468999999843222 11245899998776643221 233445666666554 455
Q ss_pred EEE
Q 022305 232 IVS 234 (299)
Q Consensus 232 ii~ 234 (299)
++.
T Consensus 101 v~~ 103 (224)
T 3h2s_A 101 VFI 103 (224)
T ss_dssp EEE
T ss_pred EEE
Confidence 543
No 414
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=26.52 E-value=47 Score=26.55 Aligned_cols=75 Identities=9% Similarity=0.085 Sum_probs=45.8
Q ss_pred CCCeEEEEeCCHHHHHhcCCCCcEEEeccCCCCCCCCCCCCeeEEEeccccccc--CCHHHHHHHHHhhccCC--cEEEE
Q 022305 158 KQDRIVGMGMNEEELKRNPVLTEYVVQDLNLNPKLPFEDNSFDVITNVVSVDYL--TKPIEVFKEMCQVLKPG--GLAIV 233 (299)
Q Consensus 158 ~~~~v~gvD~S~~ml~~a~~~~~~~~~D~~~~~~lpf~~~~FD~Vis~~~l~~~--~d~~~~l~ei~rvLkpG--G~lii 233 (299)
.+.+|++++-++..++.....++++.+|+...+. -.-..+|+|+.+.....- .......+.+.+.++.. +.+++
T Consensus 23 ~g~~V~~~~R~~~~~~~~~~~~~~~~~D~~d~~~--~~~~~~d~vi~~ag~~~~~~~~~~~~~~~l~~a~~~~~~~~~v~ 100 (221)
T 3ew7_A 23 RGHEVTAIVRNAGKITQTHKDINILQKDIFDLTL--SDLSDQNVVVDAYGISPDEAEKHVTSLDHLISVLNGTVSPRLLV 100 (221)
T ss_dssp TTCEEEEEESCSHHHHHHCSSSEEEECCGGGCCH--HHHTTCSEEEECCCSSTTTTTSHHHHHHHHHHHHCSCCSSEEEE
T ss_pred CCCEEEEEEcCchhhhhccCCCeEEeccccChhh--hhhcCCCEEEECCcCCccccchHHHHHHHHHHHHHhcCCceEEE
Confidence 3679999999987776544668999999842221 111458999977655321 22334455555566543 45554
Q ss_pred E
Q 022305 234 S 234 (299)
Q Consensus 234 ~ 234 (299)
.
T Consensus 101 ~ 101 (221)
T 3ew7_A 101 V 101 (221)
T ss_dssp E
T ss_pred E
Confidence 3
No 415
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=26.32 E-value=11 Score=34.32 Aligned_cols=91 Identities=9% Similarity=-0.041 Sum_probs=50.7
Q ss_pred CceeeccCc-CCccc-cCCCCCCCeEEEEeCCHHHHHhcCCC-CcEEEeccCCCCCCCCCCCCeeEEEecccccccCCHH
Q 022305 139 SEVFPPSNT-PGVSH-FPPGYKQDRIVGMGMNEEELKRNPVL-TEYVVQDLNLNPKLPFEDNSFDVITNVVSVDYLTKPI 215 (299)
Q Consensus 139 ~~vLDiGcG-~G~~~-~~~~~~~~~v~gvD~S~~ml~~a~~~-~~~~~~D~~~~~~lpf~~~~FD~Vis~~~l~~~~d~~ 215 (299)
.+|-=||+| -|... ......+.+|++.|.+++.++...+. +.. ..+. .++--.....|+|+...--. ...
T Consensus 23 mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~-~~s~---~e~~~~a~~~DvVi~~vp~~---~v~ 95 (358)
T 4e21_A 23 MQIGMIGLGRMGADMVRRLRKGGHECVVYDLNVNAVQALEREGIAG-ARSI---EEFCAKLVKPRVVWLMVPAA---VVD 95 (358)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCBC-CSSH---HHHHHHSCSSCEEEECSCGG---GHH
T ss_pred CEEEEECchHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCEE-eCCH---HHHHhcCCCCCEEEEeCCHH---HHH
Confidence 467778887 33211 11111357899999999887755432 111 1111 11100112359888764333 567
Q ss_pred HHHHHHHhhccCCcEEEEEecC
Q 022305 216 EVFKEMCQVLKPGGLAIVSFSN 237 (299)
Q Consensus 216 ~~l~ei~rvLkpGG~lii~~~~ 237 (299)
.+++++...|++|. +|++..+
T Consensus 96 ~vl~~l~~~l~~g~-iiId~st 116 (358)
T 4e21_A 96 SMLQRMTPLLAAND-IVIDGGN 116 (358)
T ss_dssp HHHHHHGGGCCTTC-EEEECSS
T ss_pred HHHHHHHhhCCCCC-EEEeCCC
Confidence 78888988898875 4455444
No 416
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=26.11 E-value=30 Score=29.43 Aligned_cols=87 Identities=11% Similarity=0.114 Sum_probs=48.6
Q ss_pred ceeeccCc-CCcccc-CCCCCCCeEEEEeCCHHHHHhcCCC-Cc-EEEeccCCCCCCCCCCCCeeEEEecccccccCCHH
Q 022305 140 EVFPPSNT-PGVSHF-PPGYKQDRIVGMGMNEEELKRNPVL-TE-YVVQDLNLNPKLPFEDNSFDVITNVVSVDYLTKPI 215 (299)
Q Consensus 140 ~vLDiGcG-~G~~~~-~~~~~~~~v~gvD~S~~ml~~a~~~-~~-~~~~D~~~~~~lpf~~~~FD~Vis~~~l~~~~d~~ 215 (299)
+|.=+||| -|.... .....+.+|+++|.+++.++...+. +. ....|. ... ...|+|+..---. ...
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~----~~~D~vi~av~~~---~~~ 71 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQDL---SLL----QTAKIIFLCTPIQ---LIL 71 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEESCG---GGG----TTCSEEEECSCHH---HHH
T ss_pred EEEEEcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhCCCCccccCCH---HHh----CCCCEEEEECCHH---HHH
Confidence 35567877 232110 0111245899999999877654332 11 122233 222 4589988764322 346
Q ss_pred HHHHHHHhhccCCcEEEEEecC
Q 022305 216 EVFKEMCQVLKPGGLAIVSFSN 237 (299)
Q Consensus 216 ~~l~ei~rvLkpGG~lii~~~~ 237 (299)
.+++++...++||..+ +++.+
T Consensus 72 ~~~~~l~~~~~~~~~v-v~~~~ 92 (279)
T 2f1k_A 72 PTLEKLIPHLSPTAIV-TDVAS 92 (279)
T ss_dssp HHHHHHGGGSCTTCEE-EECCS
T ss_pred HHHHHHHhhCCCCCEE-EECCC
Confidence 7788888888887644 55533
No 417
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=24.68 E-value=12 Score=35.64 Aligned_cols=48 Identities=8% Similarity=-0.082 Sum_probs=32.9
Q ss_pred CceeeccCcCCccccCCCCCCC-eEEEEeCCHHHHHhcCC------CCcEEEecc
Q 022305 139 SEVFPPSNTPGVSHFPPGYKQD-RIVGMGMNEEELKRNPV------LTEYVVQDL 186 (299)
Q Consensus 139 ~~vLDiGcG~G~~~~~~~~~~~-~v~gvD~S~~ml~~a~~------~~~~~~~D~ 186 (299)
-+++|+=||+|...+.....+. .|.++|+++...+.-+. ...++.+|+
T Consensus 89 ~~viDLFaG~GGlslG~~~aG~~~v~avE~d~~A~~ty~~N~~~~p~~~~~~~DI 143 (482)
T 3me5_A 89 FRFIDLFAGIGGIRRGFESIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDI 143 (482)
T ss_dssp EEEEEESCTTSHHHHHHHTTTEEEEEEECCCHHHHHHHHHHSCCCTTTCEEESCT
T ss_pred ceEEEecCCccHHHHHHHHCCCEEEEEEeCCHHHHHHHHHhcccCCCcceeccch
Confidence 3799999998874444433444 47899999988763222 245677887
No 418
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=24.49 E-value=20 Score=31.78 Aligned_cols=24 Identities=33% Similarity=0.602 Sum_probs=19.1
Q ss_pred CHHHHHHHHHhhccCCcEE-EEEec
Q 022305 213 KPIEVFKEMCQVLKPGGLA-IVSFS 236 (299)
Q Consensus 213 d~~~~l~ei~rvLkpGG~l-ii~~~ 236 (299)
.+...|..+.++|+|||.+ ||+|.
T Consensus 223 ~l~~~l~~~~~~l~~ggr~~visfh 247 (301)
T 1m6y_A 223 NLKEFLKKAEDLLNPGGRIVVISFH 247 (301)
T ss_dssp HHHHHHHHGGGGEEEEEEEEEEESS
T ss_pred HHHHHHHHHHHhhCCCCEEEEEecC
Confidence 4578899999999999966 55655
No 419
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=23.52 E-value=3 Score=38.28 Aligned_cols=91 Identities=15% Similarity=0.169 Sum_probs=47.0
Q ss_pred CceeeccCc-CCc--cccCCCCCCCeEEEEeCCHHHHHhcCCC--Cc--EEEeccCCCCCCCCCCCCeeEEEeccccccc
Q 022305 139 SEVFPPSNT-PGV--SHFPPGYKQDRIVGMGMNEEELKRNPVL--TE--YVVQDLNLNPKLPFEDNSFDVITNVVSVDYL 211 (299)
Q Consensus 139 ~~vLDiGcG-~G~--~~~~~~~~~~~v~gvD~S~~ml~~a~~~--~~--~~~~D~~~~~~lpf~~~~FD~Vis~~~l~~~ 211 (299)
.+|+=+|+| .|. ...... .+.+|+++|.+++-++.+.+. .. ....+. ..+.-.-...|+|+........
T Consensus 169 ~~V~ViG~G~iG~~~a~~a~~-~Ga~V~~~d~~~~~l~~~~~~~g~~~~~~~~~~---~~l~~~l~~aDvVi~~~~~p~~ 244 (377)
T 2vhw_A 169 ADVVVIGAGTAGYNAARIANG-MGATVTVLDINIDKLRQLDAEFCGRIHTRYSSA---YELEGAVKRADLVIGAVLVPGA 244 (377)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-TTCEEEEEESCHHHHHHHHHHTTTSSEEEECCH---HHHHHHHHHCSEEEECCCCTTS
T ss_pred CEEEEECCCHHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHhcCCeeEeccCCH---HHHHHHHcCCCEEEECCCcCCC
Confidence 467778876 332 111112 356999999999877654331 11 111111 1111001357999875322221
Q ss_pred CCHHHHHHHHHhhccCCcEEEE
Q 022305 212 TKPIEVFKEMCQVLKPGGLAIV 233 (299)
Q Consensus 212 ~d~~~~l~ei~rvLkpGG~lii 233 (299)
..+.-+.+++.+.+||||.++-
T Consensus 245 ~t~~li~~~~l~~mk~g~~iV~ 266 (377)
T 2vhw_A 245 KAPKLVSNSLVAHMKPGAVLVD 266 (377)
T ss_dssp CCCCCBCHHHHTTSCTTCEEEE
T ss_pred CCcceecHHHHhcCCCCcEEEE
Confidence 1111224677788999997654
No 420
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=23.29 E-value=2.3 Score=39.32 Aligned_cols=93 Identities=12% Similarity=0.142 Sum_probs=48.5
Q ss_pred CceeeccCc-CCc--cccCCCCCCCeEEEEeCCHHHHHhcCCC-CcEEEec--cC----CC------------CCCCCCC
Q 022305 139 SEVFPPSNT-PGV--SHFPPGYKQDRIVGMGMNEEELKRNPVL-TEYVVQD--LN----LN------------PKLPFED 196 (299)
Q Consensus 139 ~~vLDiGcG-~G~--~~~~~~~~~~~v~gvD~S~~ml~~a~~~-~~~~~~D--~~----~~------------~~lpf~~ 196 (299)
.+|+=+|+| .|. ...... .+++|+++|.++.-++.+.+. .+++..+ .. .. ..+.-.-
T Consensus 185 ~kV~ViG~G~iG~~aa~~a~~-lGa~V~v~D~~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~e~l 263 (381)
T 3p2y_A 185 ASALVLGVGVAGLQALATAKR-LGAKTTGYDVRPEVAEQVRSVGAQWLDLGIDAAGEGGYARELSEAERAQQQQALEDAI 263 (381)
T ss_dssp CEEEEESCSHHHHHHHHHHHH-HTCEEEEECSSGGGHHHHHHTTCEECCCC-------------CHHHHHHHHHHHHHHH
T ss_pred CEEEEECchHHHHHHHHHHHH-CCCEEEEEeCCHHHHHHHHHcCCeEEeccccccccccchhhhhHHHHhhhHHHHHHHH
Confidence 467777876 343 111222 357999999999877665442 2332211 00 00 0010011
Q ss_pred CCeeEEEecccccccCCHHHHHHHHHhhccCCcEEE
Q 022305 197 NSFDVITNVVSVDYLTKPIEVFKEMCQVLKPGGLAI 232 (299)
Q Consensus 197 ~~FD~Vis~~~l~~~~d~~~~l~ei~rvLkpGG~li 232 (299)
...|+||....+..-..+.-+-+++.+.+|||+.++
T Consensus 264 ~~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIV 299 (381)
T 3p2y_A 264 TKFDIVITTALVPGRPAPRLVTAAAATGMQPGSVVV 299 (381)
T ss_dssp TTCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEE
T ss_pred hcCCEEEECCCCCCcccceeecHHHHhcCCCCcEEE
Confidence 568999976422221122223478888999987554
No 421
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=22.91 E-value=18 Score=34.52 Aligned_cols=82 Identities=10% Similarity=0.029 Sum_probs=48.0
Q ss_pred CCceeeccCc-CCc--cccCCCCCCCeEEEEeCCHHHHHhcCCC-CcEEEeccCCCCCCCCCCCCeeEEEecccccccCC
Q 022305 138 YSEVFPPSNT-PGV--SHFPPGYKQDRIVGMGMNEEELKRNPVL-TEYVVQDLNLNPKLPFEDNSFDVITNVVSVDYLTK 213 (299)
Q Consensus 138 ~~~vLDiGcG-~G~--~~~~~~~~~~~v~gvD~S~~ml~~a~~~-~~~~~~D~~~~~~lpf~~~~FD~Vis~~~l~~~~d 213 (299)
..+|+=+|+| .|. ...... .+.+|+++|.++.-++.+.+. .+ ..++ +++ -...|+|+..-.-.++-+
T Consensus 274 GktV~IiG~G~IG~~~A~~lka-~Ga~Viv~d~~~~~~~~A~~~Ga~--~~~l---~e~---l~~aDvVi~atgt~~~i~ 344 (494)
T 3ce6_A 274 GKKVLICGYGDVGKGCAEAMKG-QGARVSVTEIDPINALQAMMEGFD--VVTV---EEA---IGDADIVVTATGNKDIIM 344 (494)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH-TTCEEEEECSCHHHHHHHHHTTCE--ECCH---HHH---GGGCSEEEECSSSSCSBC
T ss_pred cCEEEEEccCHHHHHHHHHHHH-CCCEEEEEeCCHHHHHHHHHcCCE--EecH---HHH---HhCCCEEEECCCCHHHHH
Confidence 3568888887 332 111222 357999999999877665432 22 2233 211 135899987643333211
Q ss_pred HHHHHHHHHhhccCCcEEEE
Q 022305 214 PIEVFKEMCQVLKPGGLAIV 233 (299)
Q Consensus 214 ~~~~l~ei~rvLkpGG~lii 233 (299)
.+..+.+||||.++.
T Consensus 345 -----~~~l~~mk~ggilvn 359 (494)
T 3ce6_A 345 -----LEHIKAMKDHAILGN 359 (494)
T ss_dssp -----HHHHHHSCTTCEEEE
T ss_pred -----HHHHHhcCCCcEEEE
Confidence 356677899997765
No 422
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=22.16 E-value=29 Score=31.96 Aligned_cols=37 Identities=11% Similarity=-0.015 Sum_probs=27.0
Q ss_pred CCceeeccCcCCccccCC---CCC-CCeEEEEeCCHHHHHh
Q 022305 138 YSEVFPPSNTPGVSHFPP---GYK-QDRIVGMGMNEEELKR 174 (299)
Q Consensus 138 ~~~vLDiGcG~G~~~~~~---~~~-~~~v~gvD~S~~ml~~ 174 (299)
...++|+|++.|...+.. ..+ ..+|+++|++|...+.
T Consensus 227 ~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~ 267 (409)
T 2py6_A 227 SEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQT 267 (409)
T ss_dssp SCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHH
T ss_pred CCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHH
Confidence 357999999999743321 223 3799999999988763
No 423
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=21.85 E-value=50 Score=28.27 Aligned_cols=93 Identities=8% Similarity=0.070 Sum_probs=49.6
Q ss_pred CceeeccCc-CCc---cccCCCCCCCeEEEEeCCHHHHHhcCCC-CcEEE------eccC--CCCCCCCCCCCeeEEEec
Q 022305 139 SEVFPPSNT-PGV---SHFPPGYKQDRIVGMGMNEEELKRNPVL-TEYVV------QDLN--LNPKLPFEDNSFDVITNV 205 (299)
Q Consensus 139 ~~vLDiGcG-~G~---~~~~~~~~~~~v~gvD~S~~ml~~a~~~-~~~~~------~D~~--~~~~lpf~~~~FD~Vis~ 205 (299)
.+|.=+|+| -|. ..+. ..+.+|+.+|.+++.++..++. ..... ..+. ...++.-.-...|+|+..
T Consensus 4 m~i~iiG~G~~G~~~a~~l~--~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~ 81 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLH--QGGNDVTLIDQWPAHIEAIRKNGLIADFNGEEVVANLPIFSPEEIDHQNEQVDLIIAL 81 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHH--HTTCEEEEECSCHHHHHHHHHHCEEEEETTEEEEECCCEECGGGCCTTSCCCSEEEEC
T ss_pred CeEEEECcCHHHHHHHHHHH--hCCCcEEEEECCHHHHHHHHhCCEEEEeCCCeeEecceeecchhhcccCCCCCEEEEE
Confidence 367778887 332 1121 1356899999998777654332 11111 0010 000110001258988876
Q ss_pred ccccccCCHHHHHHHHHhhccCCcEEEEEecC
Q 022305 206 VSVDYLTKPIEVFKEMCQVLKPGGLAIVSFSN 237 (299)
Q Consensus 206 ~~l~~~~d~~~~l~ei~rvLkpGG~lii~~~~ 237 (299)
---. +...+++++...|+|+.. +++..+
T Consensus 82 v~~~---~~~~v~~~l~~~l~~~~~-iv~~~~ 109 (316)
T 2ew2_A 82 TKAQ---QLDAMFKAIQPMITEKTY-VLCLLN 109 (316)
T ss_dssp SCHH---HHHHHHHHHGGGCCTTCE-EEECCS
T ss_pred eccc---cHHHHHHHHHHhcCCCCE-EEEecC
Confidence 4322 356788888888887764 445444
No 424
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=21.38 E-value=34 Score=30.48 Aligned_cols=89 Identities=15% Similarity=0.056 Sum_probs=50.0
Q ss_pred cCCceeeccCcCCccccCC---CCCCCeEEEEeCCHHHHHhcC-CC-CcEEEeccCCCCCCCCCCCCeeEEEeccccccc
Q 022305 137 YYSEVFPPSNTPGVSHFPP---GYKQDRIVGMGMNEEELKRNP-VL-TEYVVQDLNLNPKLPFEDNSFDVITNVVSVDYL 211 (299)
Q Consensus 137 ~~~~vLDiGcG~G~~~~~~---~~~~~~v~gvD~S~~ml~~a~-~~-~~~~~~D~~~~~~lpf~~~~FD~Vis~~~l~~~ 211 (299)
..++||=.|+| |.+.+.. ...+++|+++|.+++-++.+. +. .+.+ .|....+.+.-..+.+|+|+-...-.
T Consensus 180 ~g~~VlV~GaG-~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~lGa~~v-i~~~~~~~~~~~~~g~D~vid~~g~~-- 255 (357)
T 2cf5_A 180 PGLRGGILGLG-GVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADDY-VIGSDQAKMSELADSLDYVIDTVPVH-- 255 (357)
T ss_dssp TTCEEEEECCS-HHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTSCCSCE-EETTCHHHHHHSTTTEEEEEECCCSC--
T ss_pred CCCEEEEECCC-HHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHcCCcee-eccccHHHHHHhcCCCCEEEECCCCh--
Confidence 44678888875 3333221 123679999999988776655 32 2211 12200000100113699998654322
Q ss_pred CCHHHHHHHHHhhccCCcEEEE
Q 022305 212 TKPIEVFKEMCQVLKPGGLAIV 233 (299)
Q Consensus 212 ~d~~~~l~ei~rvLkpGG~lii 233 (299)
..+++..+.|+|||.+++
T Consensus 256 ----~~~~~~~~~l~~~G~iv~ 273 (357)
T 2cf5_A 256 ----HALEPYLSLLKLDGKLIL 273 (357)
T ss_dssp ----CCSHHHHTTEEEEEEEEE
T ss_pred ----HHHHHHHHHhccCCEEEE
Confidence 124677889999998765
No 425
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=20.91 E-value=30 Score=29.21 Aligned_cols=96 Identities=13% Similarity=0.092 Sum_probs=56.1
Q ss_pred CceeeccCcCCcccc---CCCCCCCeEEEEeCCHHHHHhcC----CCCcEEEeccCCCCCCC--C-----CCCCeeEEEe
Q 022305 139 SEVFPPSNTPGVSHF---PPGYKQDRIVGMGMNEEELKRNP----VLTEYVVQDLNLNPKLP--F-----EDNSFDVITN 204 (299)
Q Consensus 139 ~~vLDiGcG~G~~~~---~~~~~~~~v~gvD~S~~ml~~a~----~~~~~~~~D~~~~~~lp--f-----~~~~FD~Vis 204 (299)
+.+|=.|++.|.+.- .....+.+|+.+|.+++.++... ..+.++.+|+...+.+. + .-+..|+++.
T Consensus 9 k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~ 88 (255)
T 4eso_A 9 KKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQTLGAIDLLHI 88 (255)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSSEEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHHhCCCCEEEE
Confidence 457777877665221 11224789999999988775432 24678888883211110 0 1146899998
Q ss_pred cccccccC-----C---HH-----------HHHHHHHhhccCCcEEEEE
Q 022305 205 VVSVDYLT-----K---PI-----------EVFKEMCQVLKPGGLAIVS 234 (299)
Q Consensus 205 ~~~l~~~~-----d---~~-----------~~l~ei~rvLkpGG~lii~ 234 (299)
+..+.... + +. ...+.+.+.++.+|.++..
T Consensus 89 nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~i 137 (255)
T 4eso_A 89 NAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFT 137 (255)
T ss_dssp CCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred CCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEE
Confidence 76544321 1 11 3455666777778877654
No 426
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=20.78 E-value=47 Score=26.80 Aligned_cols=51 Identities=16% Similarity=0.126 Sum_probs=33.1
Q ss_pred CCCeEEEEeCCHHHHHhcCCCCcEEEeccCC-CCCCCCCCCCeeEEEeccccc
Q 022305 158 KQDRIVGMGMNEEELKRNPVLTEYVVQDLNL-NPKLPFEDNSFDVITNVVSVD 209 (299)
Q Consensus 158 ~~~~v~gvD~S~~ml~~a~~~~~~~~~D~~~-~~~lpf~~~~FD~Vis~~~l~ 209 (299)
.+.+|++++-++.-++.. ..++++.+|+.. .+.+.-.-+.+|+|+.+....
T Consensus 23 ~g~~V~~~~R~~~~~~~~-~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~ag~~ 74 (219)
T 3dqp_A 23 TDYQIYAGARKVEQVPQY-NNVKAVHFDVDWTPEEMAKQLHGMDAIINVSGSG 74 (219)
T ss_dssp SSCEEEEEESSGGGSCCC-TTEEEEECCTTSCHHHHHTTTTTCSEEEECCCCT
T ss_pred CCCEEEEEECCccchhhc-CCceEEEecccCCHHHHHHHHcCCCEEEECCcCC
Confidence 368999999998755433 458889999842 111221123589999776544
No 427
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=20.05 E-value=36 Score=31.92 Aligned_cols=86 Identities=15% Similarity=0.128 Sum_probs=49.5
Q ss_pred CceeeccCc-CCc--cccCCCCCCCeEEEEeCCHHHHHhcCCC---------------------C-cEEEeccCCCCCCC
Q 022305 139 SEVFPPSNT-PGV--SHFPPGYKQDRIVGMGMNEEELKRNPVL---------------------T-EYVVQDLNLNPKLP 193 (299)
Q Consensus 139 ~~vLDiGcG-~G~--~~~~~~~~~~~v~gvD~S~~ml~~a~~~---------------------~-~~~~~D~~~~~~lp 193 (299)
.+|.=+|+| -|. ... ....+.+|+.+|.+++.++.+.+. . ..+..|. +.
T Consensus 38 ~kV~VIGaG~MG~~iA~~-la~~G~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~---~~-- 111 (463)
T 1zcj_A 38 SSVGVLGLGTMGRGIAIS-FARVGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSSST---KE-- 111 (463)
T ss_dssp CEEEEECCSHHHHHHHHH-HHTTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEEESCG---GG--
T ss_pred CEEEEECcCHHHHHHHHH-HHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhhcCCH---HH--
Confidence 467788887 232 111 122467999999999887654321 0 0112222 11
Q ss_pred CCCCCeeEEEecccccccCCHHHHHHHHHhhccCCcEEEE
Q 022305 194 FEDNSFDVITNVVSVDYLTKPIEVFKEMCQVLKPGGLAIV 233 (299)
Q Consensus 194 f~~~~FD~Vis~~~l~~~~d~~~~l~ei~rvLkpGG~lii 233 (299)
-...|+||..-. +...-...+++++...++||..++.
T Consensus 112 --~~~aDlVIeaVp-e~~~~k~~v~~~l~~~~~~~~ii~s 148 (463)
T 1zcj_A 112 --LSTVDLVVEAVF-EDMNLKKKVFAELSALCKPGAFLCT 148 (463)
T ss_dssp --GTTCSEEEECCC-SCHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred --HCCCCEEEEcCC-CCHHHHHHHHHHHHhhCCCCeEEEe
Confidence 134788886642 2111136788899999998876554
Done!