Query 022308
Match_columns 299
No_of_seqs 153 out of 766
Neff 7.9
Searched_HMMs 29240
Date Mon Mar 25 03:23:26 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022308.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022308hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1i31_A Clathrin coat assembly 100.0 7.4E-77 2.5E-81 548.2 32.9 283 8-299 1-314 (314)
2 2vgl_M AP-2 complex subunit MU 100.0 2.7E-74 9.1E-79 553.6 35.0 290 1-299 115-435 (435)
3 1w63_M Adaptor-related protein 100.0 7E-74 2.4E-78 548.9 30.7 287 1-299 117-422 (423)
4 4en2_M AP-1 complex subunit MU 100.0 1.2E-71 4.2E-76 501.6 27.5 246 52-299 1-265 (266)
5 3ml6_A Chimeric complex betwee 100.0 4E-69 1.4E-73 507.7 34.0 253 44-299 98-385 (385)
6 3l81_A AP-4 complex subunit MU 100.0 2E-69 7E-74 494.6 29.2 260 37-299 7-301 (301)
7 3g9h_A Suppressor of yeast pro 99.1 2.6E-07 8.8E-12 83.9 30.5 220 62-296 67-325 (328)
8 3zw5_A Glyoxalase domain-conta 12.8 1.2E+02 0.004 22.6 2.6 17 132-148 130-147 (147)
9 1row_A SSP-19, MSP-domain prot 11.1 4.7E+02 0.016 19.0 8.7 41 158-198 43-83 (109)
10 3f6z_B MLIC, putative uncharac 11.0 1.6E+02 0.0055 21.3 2.7 25 269-293 4-28 (101)
No 1
>1i31_A Clathrin coat assembly protein AP50; beta-sandwich, peptide-binding site, protein-peptide complex, clathrin adaptor; 2.50A {Rattus norvegicus} SCOP: b.2.7.1 PDB: 1bw8_A 2pr9_A 3h85_A 1bxx_A 1hes_A 1h6e_A
Probab=100.00 E-value=7.4e-77 Score=548.20 Aligned_cols=283 Identities=24% Similarity=0.450 Sum_probs=226.0
Q ss_pred cccChhhHccccCCCcccccceeeccCCCCcccccCCCCCcccCcccCCCCCcccceEEEEEEEeEEEEEccCCcEEEEE
Q 022308 8 LTTEPNILREMIAPPNIVSKMLSVVTGNSSNVSDILPGATASCVPWRPTDVKYANNEVYVDLVEEMDAIINRDGVLVKCE 87 (299)
Q Consensus 8 ~~t~~~~Lk~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~~neI~vdV~E~i~~~~~~~G~v~~~~ 87 (299)
|+||+++||+||.++++..+... ...+..+|++.+++++||+.|++|++|||||||+|+|+++++++|.+++++
T Consensus 1 q~te~~~Lk~~i~~~~~~~~~~~------~~~~~~~~~~~~~~v~WR~~gi~y~~NEi~vdV~E~v~~~i~~~G~v~~~e 74 (314)
T 1i31_A 1 QNSETGALKTFITQQGIKSQHQT------KEEQSQITSQVTGQIGWRREGIKYRRNELFLDVLESVNLLMSPQGQVLSAH 74 (314)
T ss_dssp -------------------------------------------CTTSCSCCCCSSCEEEEEEEEEEEEEECSSCCEEEEE
T ss_pred CcCChHHHHHhhcCCCeeccccc------cccccCCCccccCCCCCCccCCccccceEEEEEEEEEEEEECCCCCEEEEE
Confidence 79999999999999998654321 012335567888999999999999999999999999999999999999999
Q ss_pred EEEEEEEEEEeCCCCeEEEEecCC---------------------cccccceecceeecCCCCCCceEEEeCCCCcEEEE
Q 022308 88 IYGEVQVNCLLSGLPDLTLSFANP---------------------SILHDVRFHPCVRFRPWESHQILSFVPPDGQFKLM 146 (299)
Q Consensus 88 i~G~i~~~~~LsG~P~~~l~ln~~---------------------~~l~d~~fH~cV~~~~f~~~~~l~f~PPdG~F~Lm 146 (299)
|.|.|.|+|+|+|||+|+|+||++ ..++||+|||||++++|+++|+|+|+||||+|+||
T Consensus 75 V~G~I~~~~~LsG~P~l~l~Ln~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~FHpcV~l~~f~~~r~IsFiPPDG~F~Lm 154 (314)
T 1i31_A 75 VSGRVVMKSYLSGMPECKFGMNDKIVIEKQGKGTADETSKSGKQSIAIDDCTFHQCVRLSKFDSERSISFIPPDGEFELM 154 (314)
T ss_dssp EEEEEEEEEECSSSCEEEEEESCCC-----------------CCCCCCSEEEECTTSBCC----CCCEEECCCSEEEEEE
T ss_pred EEEEEEEEEEcCCCCeEEEEECCchhccccccccccccccccCCceEcccccccccccHHHcCCcceEEEECCCCCeEEE
Confidence 999999999999999999999885 24789999999999999999999999999999999
Q ss_pred EEEecCCCCCCEEEEEEEEEcCCeeEEEEEEEeecCCCC--ceeeEEEEEECCCCceeeEEEecceeceeEeC--cEEEE
Q 022308 147 SYRVKKLKSTPIYVKPQLTSDAGTCRISVMVGIRNDPGK--TIDSIILQFQLPPCILSADLTSNHGTVNVLSN--KICTW 222 (299)
Q Consensus 147 ~Yr~~~~~~~P~~i~~~~~~~~~~~~~ei~l~~~~~~~~--~~~~v~I~iPlP~~~~~~~~~~~~G~~~~~~~--~~l~W 222 (299)
+||++.+..+||.|+||++..+ ++++||+++++++++. .++||.|+||+|+++..++++++.|++ +|++ ++|+|
T Consensus 155 ~Yr~~~~~~lP~~v~~~~~~~g-~~~iE~~l~~~~~~~~~~~~~nV~I~IP~P~~~~~~~~~~~~G~~-~y~~~~~~l~W 232 (314)
T 1i31_A 155 RYRTTKDIILPFRVIPLVREVG-RTKLEVKVVIKSNFKPSLLAQKIEVRIPTPLNTSGVQVICMKGKA-KYKASENAIVW 232 (314)
T ss_dssp EEEECSSCCCCEEEEEEEEEET-TTEEEEEEEEEECSCTTCEEEEEEEEEECCTTEEEEEEECSSSEE-EEEGGGTEEEE
T ss_pred EEEecCCcCCCEEEEEEEEecC-CcEEEEEEEEccCCCCcceeeEEEEEEECCCCcccceEEecCceE-EEecCCCEEEE
Confidence 9999988889999999999653 4799999999988754 699999999999999999999999999 9999 99999
Q ss_pred EeCCcCCCCceEEEEEEEeecCC-ccCCCCccEEEEEEECceeccccEEeEEEeec-----CCCcccccEEEEEecccEE
Q 022308 223 SIGRIPKDKAPSLSGTMVLETGL-ETLRVFPTFQVEFRIMGVALSGLQIDKLDLQN-----VPNRLYKGFRAVTRAGEYE 296 (299)
Q Consensus 223 ~i~~~~~~~~~~l~g~~~~~~~~-~~~~~~~pi~v~F~i~~~~~Sgl~V~~l~v~~-----~~~~~~k~vry~t~sg~Y~ 296 (299)
+|++++++.+++++|+++|.+.. ...+.++||+|+|++| +++|||+|++|+|.+ ++|+|+|||||+|+||+|+
T Consensus 233 ~I~~i~g~~e~~l~~~~~l~s~~~~~~~~~~pi~v~F~ip-~t~Sgl~V~~l~v~e~~~~~~~y~~~kwVrYit~sg~y~ 311 (314)
T 1i31_A 233 KIKRMAGMKESQISAEIELLPTNDKKKWARPPISMNFEVP-FAPSGLKVRYLKVFEPKLNYSDHDVIKWVRYIGRSGIYE 311 (314)
T ss_dssp EEEEEESSEEEEEEEEEEECCCCSSSCCCCCCEEEEEEES-SCTTCCCEEEEEEECSSSSCCGGGCEEEEEEEEEEEEEE
T ss_pred EeCcCCCCCcEEEEEEEEecCCCcCCccCCCcEEEEEEEe-ecccCcEEEEEEEeccccccCCCCccCceEEEEeCCeEE
Confidence 99999999999999999997643 3446699999999999 999999999999954 4799999999999999999
Q ss_pred EcC
Q 022308 297 VRS 299 (299)
Q Consensus 297 ~R~ 299 (299)
+|+
T Consensus 312 ~R~ 314 (314)
T 1i31_A 312 TRC 314 (314)
T ss_dssp ECC
T ss_pred EcC
Confidence 996
No 2
>2vgl_M AP-2 complex subunit MU-1; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Rattus norvegicus} PDB: 2jkr_M 2jkt_M 2bp5_M* 2xa7_M
Probab=100.00 E-value=2.7e-74 Score=553.59 Aligned_cols=290 Identities=25% Similarity=0.473 Sum_probs=249.2
Q ss_pred CcccccccccChhhHccccCCCcccccceeeccCCCCcccccCCCCCcccCcccCCCCCcccceEEEEEEEeEEEEEccC
Q 022308 1 MIDNGFPLTTEPNILREMIAPPNIVSKMLSVVTGNSSNVSDILPGATASCVPWRPTDVKYANNEVYVDLVEEMDAIINRD 80 (299)
Q Consensus 1 ~~D~G~p~~t~~~~Lk~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~~neI~vdV~E~i~~~~~~~ 80 (299)
|||+||||.||+++|+++|..+++..++... . .....|++.++++|||+.|++|++|||||||+|+|+++++++
T Consensus 115 ~id~G~~~~t~~~~l~~~i~~~~~~~~~~~~-~-----~~~~~~~~~~~~i~wr~~gi~~~~nei~vdV~E~v~~~~~~~ 188 (435)
T 2vgl_M 115 ILDFGYPQNSETGALKTFITQQGIKSQHQTK-E-----EQSQITSQVTGQIGWRREGIKYRRNELFLDVLESVNLLMSPQ 188 (435)
T ss_dssp HEETTEECCCCHHHHGGGCCCCCCCCC-----------------------CCSSCSCCCCSSCEEEEEEEEEEEEEECTT
T ss_pred HhcCCEEEecCHHHHHHHhcccccccccccc-c-----cccccccccccccccccccCCcCcceEEEEEEEEEEEEEcCC
Confidence 6899999999999999999999986654311 1 112345566788999999999999999999999999999999
Q ss_pred CcEEEEEEEEEEEEEEEeCCCCeEEEEecCC---------------------cccccceecceeecCCCCCCceEEEeCC
Q 022308 81 GVLVKCEIYGEVQVNCLLSGLPDLTLSFANP---------------------SILHDVRFHPCVRFRPWESHQILSFVPP 139 (299)
Q Consensus 81 G~v~~~~i~G~i~~~~~LsG~P~~~l~ln~~---------------------~~l~d~~fH~cV~~~~f~~~~~l~f~PP 139 (299)
|.+++++|.|+|+|+|+|+|||+|+|+||++ ..++||+|||||++++|+++|+|+|+||
T Consensus 189 G~v~~~eV~G~I~~~~~LsG~P~~~l~ln~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~fH~cV~~~~f~~~r~isF~PP 268 (435)
T 2vgl_M 189 GQVLSAHVSGRVVMKSYLSGMPECKFGMNDKIVIEKQGKGTADETSKSGKQSIAIDDCTFHQCVRLSKFDSERSISFIPP 268 (435)
T ss_dssp CCEEEEEEEEEEEEEEECSSCCEEEEEECSSSCC-----------------CCCCCEEEECTTEEEC-----CCEEECCC
T ss_pred CCEEEEEEEEEEEEEEEeCCCCeEEEEeCchhhcccccccccccccccccCceEccccccceeecHhHhccCceEEEECC
Confidence 9999999999999999999999999999875 2578999999999999999999999999
Q ss_pred CCcEEEEEEEecCCCCCCEEEEEEEEEcCCeeEEEEEEEeecCCCC--ceeeEEEEEECCCCceeeEEEecceeceeEeC
Q 022308 140 DGQFKLMSYRVKKLKSTPIYVKPQLTSDAGTCRISVMVGIRNDPGK--TIDSIILQFQLPPCILSADLTSNHGTVNVLSN 217 (299)
Q Consensus 140 dG~F~Lm~Yr~~~~~~~P~~i~~~~~~~~~~~~~ei~l~~~~~~~~--~~~~v~I~iPlP~~~~~~~~~~~~G~~~~~~~ 217 (299)
||+|+||+||++.+..+||.++||++.. +++++||+++++++++. .++||.|+||+|+++..+.++++.|++ +|++
T Consensus 269 dg~F~Lm~Yr~~~~~~~P~~i~~~~~~~-~~~~ve~~l~~~~~~~~~~~~~~V~I~IP~P~~~~~~~~~~~~G~~-~y~~ 346 (435)
T 2vgl_M 269 DGEFELMRYRTTKDIILPFRVIPLVREV-GRTKLEVKVVIKSNFKPSLLAQKIEVRIPTPLNTSGVQVICMKGKA-KYKA 346 (435)
T ss_dssp SEEEEEEEEEECSSCCCSEEEEEEEECC-TTTEEEEEEEEEECSCTTSEEEEEEEEEECCSSCCCEEEEESSSEE-EEET
T ss_pred CCcEEEEEEEecCCcCCCeEEEEEEEec-CCCEEEEEEEEeCCCCCCceeeEEEEEEECCCCCCCceEEecceeE-EEcc
Confidence 9999999999998888999999999954 45789999999887754 699999999999999999999999999 9998
Q ss_pred --cEEEEEeCCcCCCCceEEEEEEEeecCC-ccCCCCccEEEEEEECceeccccEEeEEEeec-----CCCcccccEEEE
Q 022308 218 --KICTWSIGRIPKDKAPSLSGTMVLETGL-ETLRVFPTFQVEFRIMGVALSGLQIDKLDLQN-----VPNRLYKGFRAV 289 (299)
Q Consensus 218 --~~l~W~i~~~~~~~~~~l~g~~~~~~~~-~~~~~~~pi~v~F~i~~~~~Sgl~V~~l~v~~-----~~~~~~k~vry~ 289 (299)
++|+|+|++++++.+++++|+++|.+.. ...+.++||+|+|++| +++||++|++|+|.+ ++|+|+|||||+
T Consensus 347 ~~~~l~W~I~~~~~~~~~~l~~~~~l~~~~~~~~~~~~pi~v~F~i~-~t~Sgl~V~~l~v~~~~~~~~~y~~~kwVrY~ 425 (435)
T 2vgl_M 347 SENAIVWKIKRMAGMKESQISAEIELLPTNDKKKWARPPISMNFEVP-FAPSGLKVRYLKVFEPKLNYSDHDVIKWVRYI 425 (435)
T ss_dssp TTTEEEEEEEEEETTCEEEEEEEEECCCCSCSCCCCCCCEEEEEEES-SCTTCCCEEEEEEECSSSSCBGGGSEEEEEEE
T ss_pred CCCEEEEEeccCCCCCCEEEEEEEEecCCCcCcccCCCcEEEEEEEE-ecccccEEEEEEEeccccccCCCCCcCceEEE
Confidence 9999999999999999999999997643 3456799999999999 999999999999954 379999999999
Q ss_pred EecccEEEcC
Q 022308 290 TRAGEYEVRS 299 (299)
Q Consensus 290 t~sg~Y~~R~ 299 (299)
|+||+|++|+
T Consensus 426 t~sg~y~~R~ 435 (435)
T 2vgl_M 426 GRSGIYETRC 435 (435)
T ss_dssp EEEEEEEECC
T ss_pred EeCCeEEEcC
Confidence 9999999996
No 3
>1w63_M Adaptor-related protein complex 1, MU 1 subunit; endocytosis, clathrin adaptor, transport, coated PITS; 4.0A {Mus musculus} SCOP: i.23.1.1
Probab=100.00 E-value=7e-74 Score=548.91 Aligned_cols=287 Identities=28% Similarity=0.541 Sum_probs=250.2
Q ss_pred CcccccccccChhhHccccCCCcccccceeeccCCCCcccccCCCCCcccCcccCCCCCcccceEEEEEEEeEEEEEccC
Q 022308 1 MIDNGFPLTTEPNILREMIAPPNIVSKMLSVVTGNSSNVSDILPGATASCVPWRPTDVKYANNEVYVDLVEEMDAIINRD 80 (299)
Q Consensus 1 ~~D~G~p~~t~~~~Lk~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~~neI~vdV~E~i~~~~~~~ 80 (299)
|||+||||.||++.|+++|..++.... . + +...|++.++++|||+.|++|++|||||||+|+|+++++++
T Consensus 117 ~id~G~~~~t~~~~l~~~i~~~~~~~~---~----~---~~~~~~~~~~~i~wr~~g~~~~~nei~vdV~E~v~~~~~~~ 186 (423)
T 1w63_M 117 LMDFGYPQTTDSKILQEFITQEGHKLE---T----G---APRPPATVTNAVSWRSEGIKYRKNEVFLDVIEAVNLLVSAN 186 (423)
T ss_dssp HCSSSSCCCCCSTTTTTTCCSCCCCCC---C----C--------------CCSSCSSCCCSSCEEEEEEEEEEEEEEETT
T ss_pred HhcCCEEeecCHHHHHHhhcCCCcccc---c----c---ccCCcccccCCCCccccCCccccceEEEEEEEEEEEEECCC
Confidence 689999999999999999999987521 0 0 01233456678999999999999999999999999999999
Q ss_pred CcEEEEEEEEEEEEEEEeCCCCeEEEEecCCc-------------ccccceecceeecCCCCCCceEEEeCCCCcEEEEE
Q 022308 81 GVLVKCEIYGEVQVNCLLSGLPDLTLSFANPS-------------ILHDVRFHPCVRFRPWESHQILSFVPPDGQFKLMS 147 (299)
Q Consensus 81 G~v~~~~i~G~i~~~~~LsG~P~~~l~ln~~~-------------~l~d~~fH~cV~~~~f~~~~~l~f~PPdG~F~Lm~ 147 (299)
|.+++++|.|+|+|+|+|+|||+|+|+||++. .++||+||||||+++|+++|+|+|+||||+|+||+
T Consensus 187 G~v~~~eV~G~I~~~~~LsG~P~~~l~Ln~~~~~~~~~~~~~~~v~l~d~~fHpcV~~~~f~~~r~isf~PPdg~F~Lm~ 266 (423)
T 1w63_M 187 GNVLRSEIVGSIKMRVFLSGMPELRLGLNDKVLFDNTGRGKSKSVELEDVKFHQCVRLSRFENDRTISFIPPDGEFELMS 266 (423)
T ss_dssp TEEEEEEEEEEEEEEEECSSCCEEEEEECSCC-------------CEEEEEECTTEEESSSSSCCEEEECCCSEEEEEEE
T ss_pred CCEEEEEEEEEEEEEEEeCCCCeEEEEECCccccccccccccCceEcccccccccccHHHhCCCCeEEEECCCCcEEEEE
Confidence 99999999999999999999999999999985 58899999999999999999999999999999999
Q ss_pred EEecCCCCCCEEEEEEEEEcCCeeEEEEEEEeecCCCC--ceeeEEEEEECCCCceeeEEEecceeceeEeC--cEEEEE
Q 022308 148 YRVKKLKSTPIYVKPQLTSDAGTCRISVMVGIRNDPGK--TIDSIILQFQLPPCILSADLTSNHGTVNVLSN--KICTWS 223 (299)
Q Consensus 148 Yr~~~~~~~P~~i~~~~~~~~~~~~~ei~l~~~~~~~~--~~~~v~I~iPlP~~~~~~~~~~~~G~~~~~~~--~~l~W~ 223 (299)
||++....+||.++||++..+ ++++||+++++++++. .++||.|+||+|+++.+++++++.|++ +|++ ++|+|+
T Consensus 267 Yr~~~~~~~P~~i~~~~~~~~-~~~ve~~l~~~~~~~~~~~~~~V~I~IP~P~~~~~~~~~~~~G~~-~y~~~~~~l~W~ 344 (423)
T 1w63_M 267 YRLNTHVKPLIWIESVIEKHS-HSRIEYMVKAKSQFKRRSTANNVEIHIPVPNDADSPKFKTTVGSV-KWVPENSEIVWS 344 (423)
T ss_dssp EEEECCCCCTTCCEEEEEEET-TTEEEEEEEEECCSCTTSEEESCEEEEECCTTCCCCEEEESSSEE-EEETGGGEEEEE
T ss_pred EEecCCcCCCEEEEEEEEecC-CCEEEEEEEEcccCCCcceeeEEEEEEeCCCCcccceEEecCccE-EEecCCCEEEEE
Confidence 999988889999999998543 5789999999987754 699999999999999999999999999 9998 999999
Q ss_pred eCCcCCCCceEEEEEEEeecCC-ccCCCCccEEEEEEECceeccccEEeEEEeec-CCCcccccEEEEEecccEEEcC
Q 022308 224 IGRIPKDKAPSLSGTMVLETGL-ETLRVFPTFQVEFRIMGVALSGLQIDKLDLQN-VPNRLYKGFRAVTRAGEYEVRS 299 (299)
Q Consensus 224 i~~~~~~~~~~l~g~~~~~~~~-~~~~~~~pi~v~F~i~~~~~Sgl~V~~l~v~~-~~~~~~k~vry~t~sg~Y~~R~ 299 (299)
|++++++.+++++|+++|.+.. ...+.++||+|+|++|++++||++|++|++.+ .+|+|+|||||+|+||+|++|+
T Consensus 345 I~~i~~~~~~~l~~~~~l~~~~~~~~~~~~pi~v~F~i~~~t~Sgl~V~~l~v~~~~~y~~~kwVrY~t~sg~y~~R~ 422 (423)
T 1w63_M 345 VKSFPGGKEYLMRAHFGLPSVEAEDKEGKPPISVKFEIPYFTTSGIQVRYLKIIEKSGYQAIPWVRYITQNGDYQLRT 422 (423)
T ss_dssp CSEEETTCEEEEEEEEEC----------CCCEEEEBCCSSCCTTCCCEEEEEEECSSCCCCEEEEEEEEEBSCEEECC
T ss_pred eCcCCCCCcEEEEEEEEccCCCcccccCCCcEEEEEEECCEeCCCCEEEEEEeEccCCCCCcCceEEEEeCCcEEEec
Confidence 9999999999999999997543 24567999999999999999999999999954 4799999999999999999996
No 4
>4en2_M AP-1 complex subunit MU-1; human immunodeficiency virus 1, HIV, NEF, antigen presentation, HOST defense, adaptor protein complex 1, MU1 subunit; 2.58A {Mus musculus} PDB: 4emz_A
Probab=100.00 E-value=1.2e-71 Score=501.61 Aligned_cols=246 Identities=28% Similarity=0.551 Sum_probs=224.6
Q ss_pred cccCCCCCcccceEEEEEEEeEEEEEccCCcEEEEEEEEEEEEEEEeCCCCeEEEEecCCc-------------ccccce
Q 022308 52 PWRPTDVKYANNEVYVDLVEEMDAIINRDGVLVKCEIYGEVQVNCLLSGLPDLTLSFANPS-------------ILHDVR 118 (299)
Q Consensus 52 ~WR~~~~~~~~neI~vdV~E~i~~~~~~~G~v~~~~i~G~i~~~~~LsG~P~~~l~ln~~~-------------~l~d~~ 118 (299)
+||+.|++|++|||||||+|+|+++++++|.+++++|.|+|.|+|+|+|||+|+|+||++. .++||+
T Consensus 1 ~WR~~~i~y~~nei~vdV~E~v~~~~~~~G~v~~~~v~G~i~~~~~lsG~p~~~l~ln~~~~~~~~~~~~~~~~~l~d~~ 80 (266)
T 4en2_M 1 SWRSEGIKYRKNEVFLDVIEAVNLLVSANGNVLRSEIVGSIKMRVFLSGMPELRLGLNDKVLFDNTGRGKSKSVELEDVK 80 (266)
T ss_dssp CCCCTTCCCSSEEEEEEEEEEEEEEECTTSCEEEEEEEEEEEEEEECCSCCEEEEEECBHHHHHHTTCTTSCCBCCEEEE
T ss_pred CCcCCCCccccCeEEEEEEEEEEEEECCCCCEEEEEEEEEEEEEEECCCCCEEEEEEcCccccccccccccCccCccccc
Confidence 6999999999999999999999999999999999999999999999999999999998753 388999
Q ss_pred ecceeecCCCCCCceEEEeCCCCcEEEEEEEecCCCCCCEEEEEEEEEcCCeeEEEEEEEeecCCC--CceeeEEEEEEC
Q 022308 119 FHPCVRFRPWESHQILSFVPPDGQFKLMSYRVKKLKSTPIYVKPQLTSDAGTCRISVMVGIRNDPG--KTIDSIILQFQL 196 (299)
Q Consensus 119 fH~cV~~~~f~~~~~l~f~PPdG~F~Lm~Yr~~~~~~~P~~i~~~~~~~~~~~~~ei~l~~~~~~~--~~~~~v~I~iPl 196 (299)
|||||+++.|+++|+|+|+||||+|+||+||++....+||.++||++.. +.+++||+++++++++ ..++||.|+||+
T Consensus 81 fH~cV~~~~f~~~r~i~f~PPdg~F~Lm~yr~~~~~~~Pi~i~~~~~~~-~~~~vei~v~~k~~~~~~~~~~nV~I~IP~ 159 (266)
T 4en2_M 81 FHQCVRLSRFENDRTISFIPPDGEFELMSYRLNTHVKPLIWIESVIEKH-SHSRIEYMVKAKSQFKRRSTANNVEIHIPV 159 (266)
T ss_dssp ECTTBCHHHHHHHCCCEECCCSEEEEEEEEEECCCCCCSEEEEEEEEEE-ETTEEEEEEEEEECBCTTCEEEEEEEEEEC
T ss_pred cccccCHhHccccceEEEeCCCCceEEEEEEecCCCCCCEEEEEEEecC-CCEEEEEEEEEecCCCCCcEEEEEEEEECC
Confidence 9999999999999999999999999999999998888999999999864 3579999999998875 389999999999
Q ss_pred CCCceeeEEEecceeceeEeC--cEEEEEeCCcCCCCceEEEEEEEeecC-CccCCCCccEEEEEEECceeccccEEeEE
Q 022308 197 PPCILSADLTSNHGTVNVLSN--KICTWSIGRIPKDKAPSLSGTMVLETG-LETLRVFPTFQVEFRIMGVALSGLQIDKL 273 (299)
Q Consensus 197 P~~~~~~~~~~~~G~~~~~~~--~~l~W~i~~~~~~~~~~l~g~~~~~~~-~~~~~~~~pi~v~F~i~~~~~Sgl~V~~l 273 (299)
|+++.++.++++.|++ +|++ ++|+|+|++++++.+++++|++++.+. ....+.++||+|+|++|++++|||+|++|
T Consensus 160 P~~~~~~~~~~~~G~~-~y~~~~~~lvW~I~~~~g~~e~~l~~~~~l~s~~~~~~~~~~pI~v~F~ip~~t~SGl~V~~L 238 (266)
T 4en2_M 160 PNDADSPKFKTTVGSV-KWVPENSEIVWSVKSFPGGKEYLMRAHFGLPSVEAEDKEGKPPISVKFEIPYFTTSGIQVRYL 238 (266)
T ss_dssp CTTCEEEEEEESSSEE-EEETTTTEEEEEEEEEESSCEEEEEEEEEC----------CCCEEEEEEEESEESSCCCEEEE
T ss_pred CCCcCcceEEecCceE-EEeccCCEEEEEEeeECCCcceEEEEEEEeCCCCCCCcccCCcEEEEEEeCCceeCCcEEEEE
Confidence 9999999999999999 9999 999999999999999999999999653 23456799999999999999999999999
Q ss_pred Eee-cCCCcccccEEEEEecccEEEcC
Q 022308 274 DLQ-NVPNRLYKGFRAVTRAGEYEVRS 299 (299)
Q Consensus 274 ~v~-~~~~~~~k~vry~t~sg~Y~~R~ 299 (299)
+|. +.+|+++|||||+|+||+|++|+
T Consensus 239 ~v~e~~~y~~~kwVrY~T~sg~y~~R~ 265 (266)
T 4en2_M 239 KIIEKSGYQALPWVRYITQNGDYQLRT 265 (266)
T ss_dssp EEECSSCCCEEEEEEEEEECSSEEECC
T ss_pred EeeccCCCCCCCCEEEEEeCCCEEEec
Confidence 994 46899999999999999999996
No 5
>3ml6_A Chimeric complex between protein dishevlled2 HOMO and clathrin adaptor AP-2 complex...; dishevelled, frizzled internalization; 3.50A {Mus musculus}
Probab=100.00 E-value=4e-69 Score=507.65 Aligned_cols=253 Identities=24% Similarity=0.442 Sum_probs=229.7
Q ss_pred CCCCcccC-cc---cCCCCCcccceEEEEEEEeEEEEEccCCcEEEEEEEEEEEEEEEeCCCCeEEEEecCC--------
Q 022308 44 PGATASCV-PW---RPTDVKYANNEVYVDLVEEMDAIINRDGVLVKCEIYGEVQVNCLLSGLPDLTLSFANP-------- 111 (299)
Q Consensus 44 ~~~~~~~~-~W---R~~~~~~~~neI~vdV~E~i~~~~~~~G~v~~~~i~G~i~~~~~LsG~P~~~l~ln~~-------- 111 (299)
|....+++ || |..|++|++|||||||+|+|+++++++|.+++++|.|+|.|+|+|+|||+|+|+||++
T Consensus 98 ~~~~s~~~~~~~~~~~~gi~y~knEi~vdV~E~v~~~~~~~G~v~~~eV~G~I~~k~~LsG~P~~~l~LNd~~~~~~~~~ 177 (385)
T 3ml6_A 98 PRPYSPQPPPYHELEFGGSGGSRNELFLDVLESVNLLMSPQGQVLSAHVSGRVVMKSYLSGMPECKFGMNDKIVIEKQGK 177 (385)
T ss_dssp -----CCCCCCEEBCSSSBCCCCCEEEEEEEEEEEEEECTTSCEEEEEEEEEEEEEEECSSCCEEEEEECC---------
T ss_pred cCccCCCCCCchhccccCCccccceEEEEEEEEEEEEECCCCCEEEEEEEEEEEEEEeCCCCCeEEEEEcCccccccccc
Confidence 34556666 99 8999999999999999999999999999999999999999999999999999999885
Q ss_pred -------------cccccceecceeecCCCCCCceEEEeCCCCcEEEEEEEecCCCCCCEEEEEEEEEcCCeeEEEEEEE
Q 022308 112 -------------SILHDVRFHPCVRFRPWESHQILSFVPPDGQFKLMSYRVKKLKSTPIYVKPQLTSDAGTCRISVMVG 178 (299)
Q Consensus 112 -------------~~l~d~~fH~cV~~~~f~~~~~l~f~PPdG~F~Lm~Yr~~~~~~~P~~i~~~~~~~~~~~~~ei~l~ 178 (299)
..++||+|||||++++|+++|+|+|+||||+|+||+||++.+..+||.|+||++..+ ++++||+++
T Consensus 178 ~~~~~~~~~~~~~i~l~d~~FH~CV~l~~f~~~r~IsFiPPDg~F~Lm~Yr~~~~~~~Pf~i~~~v~~~~-~~~vei~v~ 256 (385)
T 3ml6_A 178 GTADETSKSGKQSIAIDDCTFHQCVRLSKFDSERSISFIPPDGEFELMRYRTTKDIILPFRVIPLVREVG-RTKLEVKVV 256 (385)
T ss_dssp -------------CCCCEEEECTTBCCCCSSSCSEEEECCCSEEEEEEEEEECSSCCCSEEEEEEEEEET-TTEEEEEEE
T ss_pred cccccccccccCceEccccccccccChhHccccceEEEeCCCCceEEEEEEcCCCCCCCEEEEEEEEeCC-CeEEEEEEE
Confidence 247899999999999999999999999999999999999988889999999999764 689999999
Q ss_pred eecCCCC--ceeeEEEEEECCCCceeeEEEecceeceeEeC--cEEEEEeCCcCCCCceEEEEEEEeecCC-ccCCCCcc
Q 022308 179 IRNDPGK--TIDSIILQFQLPPCILSADLTSNHGTVNVLSN--KICTWSIGRIPKDKAPSLSGTMVLETGL-ETLRVFPT 253 (299)
Q Consensus 179 ~~~~~~~--~~~~v~I~iPlP~~~~~~~~~~~~G~~~~~~~--~~l~W~i~~~~~~~~~~l~g~~~~~~~~-~~~~~~~p 253 (299)
++++++. .++||.|+||+|+++.++++.++.|++ +|++ ++|+|+|++++|+.+++++|++++.+.. ...+.++|
T Consensus 257 lk~~f~~~~~~~nV~I~IP~P~~~~~~~~~~~~G~~-~y~~~~~~lvW~I~k~~g~~e~~l~~~~~l~~~~~~~~~~~~P 335 (385)
T 3ml6_A 257 IKSNFKPSLLAQKIEVRIPTPLNTSGVQVICMKGKA-KYKASENAIVWKIKRMAGMKESQISAEIELLPTNDKKKWARPP 335 (385)
T ss_dssp EEECSCTTCCEEEEEEEEECCTTEEEEEEEESSSEE-EEEGGGTEEEEEEEEECSSEEEEEEEEEEECCCSSCCSCCCCC
T ss_pred EeecCCCcceEEEEEEEecCCCCcccceEEecCceE-EEeccCcEEEEEeeeECCCcceEEEEEEEECCCCCCccccCCC
Confidence 9998754 899999999999999999999999999 9999 9999999999999999999999996532 34467999
Q ss_pred EEEEEEECceeccccEEeEEEe-ec----CCCcccccEEEEEecccEEEcC
Q 022308 254 FQVEFRIMGVALSGLQIDKLDL-QN----VPNRLYKGFRAVTRAGEYEVRS 299 (299)
Q Consensus 254 i~v~F~i~~~~~Sgl~V~~l~v-~~----~~~~~~k~vry~t~sg~Y~~R~ 299 (299)
|+|+|++| +++|||+|++|+| ++ ++|+++|||||+|+||+|++|+
T Consensus 336 I~v~F~Ip-~t~SGl~Vr~L~v~e~~~~~~~y~~~kwVRYiT~sg~Y~~R~ 385 (385)
T 3ml6_A 336 ISMNFEVP-FAPSGLKVRYLKVFEPKLNYSDHDVIKWVRYIGRSGIYETRC 385 (385)
T ss_dssp EEEEEEES-SCTTCCCEEEEEEECSSSCCCGGGCEEEEEECEEEEEEEECC
T ss_pred EEEEEEEe-ccccCCEEEEEEEecccCcccCCCccccEEEEEECCCEEecC
Confidence 99999999 9999999999999 33 4689999999999999999996
No 6
>3l81_A AP-4 complex subunit MU-1; immunoglobulin-like beta-sandwich, coated PIT, golgi apparat membrane, phosphoprotein, protein transport, transport; 1.60A {Homo sapiens}
Probab=100.00 E-value=2e-69 Score=494.64 Aligned_cols=260 Identities=24% Similarity=0.376 Sum_probs=208.5
Q ss_pred CcccccCCC-CCcccC-cccCCCCCcccceEEEEEEEeEEEEEccCCcEEEEEEEEEEEEEEEeCCCCeEEEEecCCc--
Q 022308 37 SNVSDILPG-ATASCV-PWRPTDVKYANNEVYVDLVEEMDAIINRDGVLVKCEIYGEVQVNCLLSGLPDLTLSFANPS-- 112 (299)
Q Consensus 37 ~~~~~~~~~-~~~~~~-~WR~~~~~~~~neI~vdV~E~i~~~~~~~G~v~~~~i~G~i~~~~~LsG~P~~~l~ln~~~-- 112 (299)
++.++.+|+ ++.+++ +||+. +|++|||||||+|+|+++++++|.+++++|.|+|.|+|+|+|||+|+|+||++.
T Consensus 7 ~~~~~~~~~~a~~~pv~~wr~~--~~~knEi~vdV~E~v~~~~~~~G~v~~~eV~G~I~~~~~LsG~P~~~l~Lnd~~~~ 84 (301)
T 3l81_A 7 FQQSKVAPSSAASRPVLSSRSD--QSQKNEVFLDVVERLSVLIASNGSLLKVDVQGEIRLKSFLPSGSEMRIGLTEEFSV 84 (301)
T ss_dssp ----------------------------CEEEEEEEEEEEEEECTTSCEEEEEEEEEEEEEECCCTTCEEEEEECSSCEE
T ss_pred ccCCcccCchhhcCcccccccc--cCCcceEEEEEEEEEEEEECCCCCEEEEEEEEEEEEEEeCCCCCeEEEEEcccccc
Confidence 334445554 455555 99996 899999999999999999999999999999999999999999999999999642
Q ss_pred ------------ccccceecceeecCCCCCCceEEEeCCCCcEEEEEEEecCCC--CCCEEEEEEEEEcCCeeEEEEEEE
Q 022308 113 ------------ILHDVRFHPCVRFRPWESHQILSFVPPDGQFKLMSYRVKKLK--STPIYVKPQLTSDAGTCRISVMVG 178 (299)
Q Consensus 113 ------------~l~d~~fH~cV~~~~f~~~~~l~f~PPdG~F~Lm~Yr~~~~~--~~P~~i~~~~~~~~~~~~~ei~l~ 178 (299)
.++||+|||||++++|+++|+|+|+||||+|+||+||++... .+||.++||++...+++++||+++
T Consensus 85 ~~~~~~~~~~~~~l~d~~fH~cV~~~~f~~~r~IsFiPPDg~F~Lm~Yr~~~~~~~~~P~~v~~~v~~~~~~~~ie~~l~ 164 (301)
T 3l81_A 85 GKSELRGYGPGIRVDEVSFHSSVNLDEFESHRILRLQPPQGELTVMRYQLSDDLPSPLPFRLFPSVQWDRGSGRLQVYLK 164 (301)
T ss_dssp SCCTTTCCCSSSEESEEEEETTCBCTTHHHHCEEEECCCSEEEEEEEEEECSCCSSCCSEEEEEEEEECTTTSEEEEEEE
T ss_pred cccccccccCceEccccccccccChhHccccceEEecCCCCeeEEEEEEecCCCccCCCEEEEEEEEECCCcEEEEEEEE
Confidence 378999999999999999999999999999999999998754 799999999998654589999999
Q ss_pred eecCCCC--ceeeEEEEEECCCCceeeE--EEecceeceeEeCcEEEEEeCCcCCCCceEEEEEEEeecCCc--------
Q 022308 179 IRNDPGK--TIDSIILQFQLPPCILSAD--LTSNHGTVNVLSNKICTWSIGRIPKDKAPSLSGTMVLETGLE-------- 246 (299)
Q Consensus 179 ~~~~~~~--~~~~v~I~iPlP~~~~~~~--~~~~~G~~~~~~~~~l~W~i~~~~~~~~~~l~g~~~~~~~~~-------- 246 (299)
++++++. .++||.|+||+|+++.++. +.++.|++ +|..++|+|+|++++|+.+.++++++++.....
T Consensus 165 l~~~f~~~~~~~nV~I~IPvP~~~~~~~~~~~~~~G~~-~y~~~~lvW~I~~~~g~~~~s~~~~~~l~~~~~~~~~~~~~ 243 (301)
T 3l81_A 165 LRCDLLSKSQALNVRLHLPLPRGVVSLSQELSSPEQKA-ELAEGALRWDLPRVQGGSQLSGLFQMDVPGPPGPPSHGLST 243 (301)
T ss_dssp EEECSCTTCEEEEEEEEEECCTTCEEEEEEESSTTCEE-EEETTEEEEEECCEETTCEEEEEEEEECCCCCC--------
T ss_pred EecCCCCCcEEEEEEEEEcCCCCcccceEEEeecCceE-EEeCcEEEEEEeeECCCcEEeEEEEEEecCCcccccccccc
Confidence 9988753 8999999999999998888 55789999 993399999999999988777777777743211
Q ss_pred --cCCCCccEEEEEEECceeccccEEeEEEeec---CCCcccccEEEEEecccEEEcC
Q 022308 247 --TLRVFPTFQVEFRIMGVALSGLQIDKLDLQN---VPNRLYKGFRAVTRAGEYEVRS 299 (299)
Q Consensus 247 --~~~~~~pi~v~F~i~~~~~Sgl~V~~l~v~~---~~~~~~k~vry~t~sg~Y~~R~ 299 (299)
..+.++||+|+|++|++++|||+|++|+|.+ .+|+++|||||+|+||+|++|+
T Consensus 244 ~~~~~~~~PI~v~F~ip~~t~SGl~Vr~L~v~e~~~~~y~~~kwVRYiT~sg~Y~~R~ 301 (301)
T 3l81_A 244 SASPLGLGPASLSFELPRHTCSGLQVRFLRLAFRPSGNANPHKWVRHLSHSDAYVIRI 301 (301)
T ss_dssp ----CCCCCEEEEEEEETCCSSCCCEEEEEEEC-------CEEEEEEEEEEEEEEECC
T ss_pred ccccccCCCEEEEEEeCCccccCcEEEEEEEecccccCCCCccceEEEEeCCcEEEcC
Confidence 1456999999999999999999999999954 3589999999999999999996
No 7
>3g9h_A Suppressor of yeast profilin deletion; SYP1, MU, adaptor, endocytosis, phosphoprotein; HET: 1PG; 2.80A {Saccharomyces cerevisiae}
Probab=99.12 E-value=2.6e-07 Score=83.86 Aligned_cols=220 Identities=18% Similarity=0.264 Sum_probs=140.1
Q ss_pred cceEEEEEEEeEEEEEccCCcEEEEEEEEEEEEEEEeCC-------CCeEEEEecCCcccccce----ecceeecCCCCC
Q 022308 62 NNEVYVDLVEEMDAIINRDGVLVKCEIYGEVQVNCLLSG-------LPDLTLSFANPSILHDVR----FHPCVRFRPWES 130 (299)
Q Consensus 62 ~neI~vdV~E~i~~~~~~~G~v~~~~i~G~i~~~~~LsG-------~P~~~l~ln~~~~l~d~~----fH~cV~~~~f~~ 130 (299)
.-++-..|.|.||+.+.. |.+.++.|.|+|.+.- ..| -+.+.+.|++...|+.+. |-.++.-
T Consensus 67 ~pGLnASI~E~VNA~Fkg-g~~tk~~v~GEiaLsy-~~~~~s~~p~p~~l~fRL~N~~~Lekv~pN~~fv~~~~~----- 139 (328)
T 3g9h_A 67 QFGLNASIAEVLNASFKD-GMLQNSQLIGEIALNY-LPNSVMNSPLPIGINLRINNGAKFEKVILNQAFIERVAP----- 139 (328)
T ss_dssp CCEEEEEEEEEEEEEEET-TEEEEEEEEEEEEEEE-ECCSSSCCCCCSEEEEEEETGGGEEEEEECTTTEEEEET-----
T ss_pred CCceeEEEEEEEEEEEEC-CcEEEEEEEEEEEEec-CCCccccCCCCccEEEEecCcchhheeeCCHHHhccCCC-----
Confidence 457888999999999954 7899999999987754 444 245888888766566542 2223321
Q ss_pred CceEEEeCC---CCcEEEEEEEecCCCCCCEEEEEEEEEcCCeeEEEEEEEeecCCCC-----ceeeEEEEEECCC-Cce
Q 022308 131 HQILSFVPP---DGQFKLMSYRVKKLKSTPIYVKPQLTSDAGTCRISVMVGIRNDPGK-----TIDSIILQFQLPP-CIL 201 (299)
Q Consensus 131 ~~~l~f~PP---dG~F~Lm~Yr~~~~~~~P~~i~~~~~~~~~~~~~ei~l~~~~~~~~-----~~~~v~I~iPlP~-~~~ 201 (299)
....|-++ ...-.+|+|+++. ...|+.+.+.-+.+.....+-|.+++...+.. .++||+|.+|+.. .++
T Consensus 140 -~eF~vn~~~L~sktv~~lKYqVs~-~~~PL~l~p~WK~E~~qtsliI~Yk~NP~~~~~~~~~~L~Nv~~~V~ldGa~at 217 (328)
T 3g9h_A 140 -EEFKVNPSFIDSRTLGAIKYSIKE-PIAPIVIHPVWRFESHQASVVLTVKMSPSLPDEISQIVIEDLVVFVNIDGANAT 217 (328)
T ss_dssp -TEEEECTTTTBTCEEEEEEEEEES-CCCSEEEEEEEEECSSEEEEEEEEEECTTSCTTCCEEEEEEEEEEEEBCSSCEE
T ss_pred -CCEEEchHHhcccceeeEEEEECC-CCCCeEEEeeeecCCCeeEEEEEEEECCCCcCcCCCceeeeEEEEEEeCCCcee
Confidence 22222222 1235679999976 77899999988877544444444444443332 7999999999976 344
Q ss_pred eeEEEecceeceeEeCcEEEEEeCC-c--CCCCc-eEEEEEEEeecCCccCCCCccEEEEEEECce---------ecccc
Q 022308 202 SADLTSNHGTVNVLSNKICTWSIGR-I--PKDKA-PSLSGTMVLETGLETLRVFPTFQVEFRIMGV---------ALSGL 268 (299)
Q Consensus 202 ~~~~~~~~G~~~~~~~~~l~W~i~~-~--~~~~~-~~l~g~~~~~~~~~~~~~~~pi~v~F~i~~~---------~~Sgl 268 (299)
++... ..|.+ .=+.+.+.|+|+. + ..+.+ ..|.|.|..+... .+. -..|.++|++.+. .-|||
T Consensus 218 s~qsk-P~gtw-n~e~~ri~Wkl~e~l~l~~~g~~gkLiARf~~~g~~-~~~-~~gV~akF~~~~~~~~~~~~~~~gsgi 293 (328)
T 3g9h_A 218 SALSK-PQGSF-SKEKKRITWRFKEPVVLTRNGEGQRLIARFITDGLA-HES-AKGVITKFTISETDNVALPHSGAGSGI 293 (328)
T ss_dssp EEEES-SSCCB-CSSSCEEEEECSSCEEEETTCCCEEEEEEEEESSCC-CBC-SSCEEEEEEECCCSCSSCTTTTCSCCC
T ss_pred EEEec-CCcee-ccccCEEEEECCCCcccccCCCCCeEEEEEEcCCCC-CCC-CCcEEEEEEEeCCCcccccccccCCce
Confidence 43333 34555 3233999999998 3 22223 6799998873322 211 2239999999875 46799
Q ss_pred EEeEEEeec-CCCccccc-----EEEEEecccEE
Q 022308 269 QIDKLDLQN-VPNRLYKG-----FRAVTRAGEYE 296 (299)
Q Consensus 269 ~V~~l~v~~-~~~~~~k~-----vry~t~sg~Y~ 296 (299)
.|...+... ++. ...| +|=++ +|.|+
T Consensus 294 ~i~~~~~~~~dPF-~~~W~~v~~~r~l~-~G~Y~ 325 (328)
T 3g9h_A 294 TLTCQELDENNPF-GGEWLDVNTKRTLT-TGNYH 325 (328)
T ss_dssp EEEEEEESSSCTT-CCCCEECEEEEEEE-EEEEE
T ss_pred eEEecccccCCCC-cCcccccceEEEEe-eeEEE
Confidence 998887732 211 1235 34433 57886
No 8
>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens}
Probab=12.81 E-value=1.2e+02 Score=22.58 Aligned_cols=17 Identities=24% Similarity=0.460 Sum_probs=14.2
Q ss_pred ceEEEeCCCC-cEEEEEE
Q 022308 132 QILSFVPPDG-QFKLMSY 148 (299)
Q Consensus 132 ~~l~f~PPdG-~F~Lm~Y 148 (299)
+.+.|..||| .++|+.|
T Consensus 130 ~~~~~~DPdGn~iEl~~y 147 (147)
T 3zw5_A 130 MSIYFRDPDRNLIEVSNY 147 (147)
T ss_dssp EEEEEECTTCCEEEEEEC
T ss_pred EEEEEECCCCCEEEEecC
Confidence 4789999999 5888876
No 9
>1row_A SSP-19, MSP-domain protein like family member; beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Caenorhabditis elegans} SCOP: b.1.11.2
Probab=11.15 E-value=4.7e+02 Score=18.97 Aligned_cols=41 Identities=10% Similarity=0.037 Sum_probs=18.4
Q ss_pred EEEEEEEEEcCCeeEEEEEEEeecCCCCceeeEEEEEECCC
Q 022308 158 IYVKPQLTSDAGTCRISVMVGIRNDPGKTIDSIILQFQLPP 198 (299)
Q Consensus 158 ~~i~~~~~~~~~~~~~ei~l~~~~~~~~~~~~v~I~iPlP~ 198 (299)
+.|+|..-.-.-+..+++.+.+.......=.-+...+..|.
T Consensus 43 y~VrP~~G~I~P~~~~~i~I~~q~~~~~~dKflvq~~~~~~ 83 (109)
T 1row_A 43 YRIAPVFGFVDPSGSKDVVITRTAGAPKEDKLVVHFASAPA 83 (109)
T ss_dssp EEEECSEEEECTTEEEEEEEEECSCCCEEEEEEEEEEECCT
T ss_pred eEEcCCceEECCCCeEEEEEEeCCCCCCCCEEEEEEEECCC
Confidence 44544443322245566666555532223333444445544
No 10
>3f6z_B MLIC, putative uncharacterized protein; beta barrel, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; 2.50A {Pseudomonas aeruginosa}
Probab=10.99 E-value=1.6e+02 Score=21.30 Aligned_cols=25 Identities=20% Similarity=0.157 Sum_probs=12.0
Q ss_pred EEeEEEeecCCCcccccEEEEEecc
Q 022308 269 QIDKLDLQNVPNRLYKGFRAVTRAG 293 (299)
Q Consensus 269 ~V~~l~v~~~~~~~~k~vry~t~sg 293 (299)
+|+++.+.+..-....+++|.|..|
T Consensus 4 ~~~~~~~p~~~~~~~~~~~Y~C~~~ 28 (101)
T 3f6z_B 4 QVDYLALPGDAKLDTRSVDYKCENG 28 (101)
T ss_dssp CCEEEEESSSSCEEEEEEEEEETTS
T ss_pred eeeEEeCCCCCCCCCccEEEECCCC
Confidence 3455555433333444555555544
Done!