BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022309
(299 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 213 bits (543), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 117/235 (49%), Positives = 154/235 (65%), Gaps = 6/235 (2%)
Query: 62 FTYRQLVAATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQ-GEKEFLVEV 120
F+ R+L A+DNF + N LG+GGFG VYKG+LA+ G +VAVK+L + Q GE +F EV
Sbjct: 28 FSLRELQVASDNFSNKNILGRGGFGKVYKGRLAD-GTLVAVKRLKEERXQGGELQFQTEV 86
Query: 121 LMLSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAA 180
M+S+ H NL+ L G+C T+RLLVY YM GS+ L PLDW R +IA
Sbjct: 87 EMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIAL 146
Query: 181 GAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMG 240
G+ARGL YLH+ DP +I+RD+KA NILL + F + DFGLAK D HV V G
Sbjct: 147 GSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-XHVXXAVRG 205
Query: 241 THGYCAPEYATTGKLTAKSDIFSFGVVLLELITGRPAMDDSQ---GHERMLVDWV 292
T G+ APEY +TGK + K+D+F +GV+LLELITG+ A D ++ + ML+DWV
Sbjct: 206 TIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWV 260
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 211 bits (538), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 116/235 (49%), Positives = 153/235 (65%), Gaps = 6/235 (2%)
Query: 62 FTYRQLVAATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQ-GEKEFLVEV 120
F+ R+L A+DNF + N LG+GGFG VYKG+LA+ G +VAVK+L + Q GE +F EV
Sbjct: 20 FSLRELQVASDNFXNKNILGRGGFGKVYKGRLAD-GXLVAVKRLKEERTQGGELQFQTEV 78
Query: 121 LMLSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAA 180
M+S+ H NL+ L G+C T+RLLVY YM GS+ L PLDW R +IA
Sbjct: 79 EMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIAL 138
Query: 181 GAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMG 240
G+ARGL YLH+ DP +I+RD+KA NILL + F + DFGLAK D HV V G
Sbjct: 139 GSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-XHVXXAVRG 197
Query: 241 THGYCAPEYATTGKLTAKSDIFSFGVVLLELITGRPAMDDSQ---GHERMLVDWV 292
G+ APEY +TGK + K+D+F +GV+LLELITG+ A D ++ + ML+DWV
Sbjct: 198 XIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWV 252
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 182 bits (462), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 109/255 (42%), Positives = 153/255 (60%), Gaps = 12/255 (4%)
Query: 44 NTLDDTLSAHENKNKENTFTYR----QLVAATDNFKDTNFLGQGGFGAVYKGKLAETGQV 99
N+++D LS+ E +YR L AT+NF +G G FG VYKG L + G
Sbjct: 10 NSINDALSSSYLVPFE---SYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRD-GAK 65
Query: 100 VAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDH 159
VA+K+ QG +EF E+ LS RHP+LV LIG+C E + +L+Y+YM G+L+ H
Sbjct: 66 VALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRH 125
Query: 160 LLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSD 219
L G + W R++I GAARGL YLH +A +I+RD+K+ NILL + F PK++D
Sbjct: 126 LYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITD 182
Query: 220 FGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTGKLTAKSDIFSFGVVLLELITGRPAMD 279
FG++K G D++H+ V GT GY PEY G+LT KSD++SFGVVL E++ R A+
Sbjct: 183 FGISKKGTELDQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIV 242
Query: 280 DSQGHERM-LVDWVT 293
S E + L +W
Sbjct: 243 QSLPREMVNLAEWAV 257
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 179 bits (454), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 108/255 (42%), Positives = 152/255 (59%), Gaps = 12/255 (4%)
Query: 44 NTLDDTLSAHENKNKENTFTYR----QLVAATDNFKDTNFLGQGGFGAVYKGKLAETGQV 99
N+++D LS+ E +YR L AT+NF +G G FG VYKG L + G
Sbjct: 10 NSINDALSSSYLVPFE---SYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRD-GAK 65
Query: 100 VAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDH 159
VA+K+ QG +EF E+ LS RHP+LV LIG+C E + +L+Y+YM G+L+ H
Sbjct: 66 VALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRH 125
Query: 160 LLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSD 219
L G + W R++I GAARGL YLH +A +I+RD+K+ NILL + F PK++D
Sbjct: 126 LYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITD 182
Query: 220 FGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTGKLTAKSDIFSFGVVLLELITGRPAMD 279
FG++K G ++H+ V GT GY PEY G+LT KSD++SFGVVL E++ R A+
Sbjct: 183 FGISKKGTELGQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIV 242
Query: 280 DSQGHERM-LVDWVT 293
S E + L +W
Sbjct: 243 QSLPREMVNLAEWAV 257
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 174 bits (441), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 108/253 (42%), Positives = 157/253 (62%), Gaps = 27/253 (10%)
Query: 54 ENKNKE------NTFTYRQLVAATDNFKDT------NFLGQGGFGAVYKGKLAETGQVVA 101
ENK+ E ++F++ +L T+NF + N +G+GGFG VYKG + T VA
Sbjct: 1 ENKSLEVSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNT--TVA 58
Query: 102 VKQL----DDTGFQGEKEFLVEVLMLSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLE 157
VK+L D T + +++F E+ +++ +H NLV L+G+ ++G LVY YMP GSL
Sbjct: 59 VKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLL 118
Query: 158 DHLLGL--TPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHP 215
D L L TP PL W+ R KIA GAA G+ +LH I+RD+K+ NILL + F
Sbjct: 119 DRLSCLDGTP---PLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTA 172
Query: 216 KLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTGKLTAKSDIFSFGVVLLELITGR 275
K+SDFGLA+ ++ + +R++GT Y APE A G++T KSDI+SFGVVLLE+ITG
Sbjct: 173 KISDFGLARASEKFAQTVMXSRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGL 231
Query: 276 PAMDDSQGHERML 288
PA+D+ + + +L
Sbjct: 232 PAVDEHREPQLLL 244
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 173 bits (439), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 108/253 (42%), Positives = 156/253 (61%), Gaps = 27/253 (10%)
Query: 54 ENKNKE------NTFTYRQLVAATDNFKDT------NFLGQGGFGAVYKGKLAETGQVVA 101
ENK+ E ++F++ +L T+NF + N +G+GGFG VYKG + T VA
Sbjct: 1 ENKSLEVSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNT--TVA 58
Query: 102 VKQL----DDTGFQGEKEFLVEVLMLSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLE 157
VK+L D T + +++F E+ +++ +H NLV L+G+ ++G LVY YMP GSL
Sbjct: 59 VKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLL 118
Query: 158 DHLLGL--TPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHP 215
D L L TP PL W+ R KIA GAA G+ +LH I+RD+K+ NILL + F
Sbjct: 119 DRLSCLDGTP---PLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTA 172
Query: 216 KLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTGKLTAKSDIFSFGVVLLELITGR 275
K+SDFGLA+ ++ + R++GT Y APE A G++T KSDI+SFGVVLLE+ITG
Sbjct: 173 KISDFGLARASEKFAQTVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGL 231
Query: 276 PAMDDSQGHERML 288
PA+D+ + + +L
Sbjct: 232 PAVDEHREPQLLL 244
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 172 bits (436), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 104/241 (43%), Positives = 150/241 (62%), Gaps = 21/241 (8%)
Query: 60 NTFTYRQLVAATDNFKDT------NFLGQGGFGAVYKGKLAETGQVVAVKQL----DDTG 109
++F++ +L T+NF + N +G+GGFG VYKG + T VAVK+L D T
Sbjct: 7 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNT--TVAVKKLAAMVDITT 64
Query: 110 FQGEKEFLVEVLMLSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGL--TPEM 167
+ +++F E+ +++ +H NLV L+G+ ++G LVY YMP GSL D L L TP
Sbjct: 65 EELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTP-- 122
Query: 168 KPLDWNTRMKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGP 227
PL W+ R KIA GAA G+ +LH I+RD+K+ NILL + F K+SDFGLA+
Sbjct: 123 -PLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASE 178
Query: 228 TGDKSHVSTRVMGTHGYCAPEYATTGKLTAKSDIFSFGVVLLELITGRPAMDDSQGHERM 287
+ + R++GT Y APE A G++T KSDI+SFGVVLLE+ITG PA+D+ + + +
Sbjct: 179 KFAQXVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLL 237
Query: 288 L 288
L
Sbjct: 238 L 238
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 167 bits (423), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 103/241 (42%), Positives = 147/241 (60%), Gaps = 21/241 (8%)
Query: 60 NTFTYRQLVAATDNFKDT------NFLGQGGFGAVYKGKLAETGQVVAVKQL----DDTG 109
++F++ +L T+NF + N G+GGFG VYKG + T VAVK+L D T
Sbjct: 4 HSFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNT--TVAVKKLAAMVDITT 61
Query: 110 FQGEKEFLVEVLMLSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGL--TPEM 167
+ +++F E+ + + +H NLV L+G+ ++G LVY Y P GSL D L L TP
Sbjct: 62 EELKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTP-- 119
Query: 168 KPLDWNTRMKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGP 227
PL W+ R KIA GAA G+ +LH I+RD+K+ NILL + F K+SDFGLA+
Sbjct: 120 -PLSWHXRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASE 175
Query: 228 TGDKSHVSTRVMGTHGYCAPEYATTGKLTAKSDIFSFGVVLLELITGRPAMDDSQGHERM 287
+ +R++GT Y APE A G++T KSDI+SFGVVLLE+ITG PA+D+ + + +
Sbjct: 176 KFAQXVXXSRIVGTTAYXAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLL 234
Query: 288 L 288
L
Sbjct: 235 L 235
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 119 bits (298), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/196 (37%), Positives = 109/196 (55%), Gaps = 8/196 (4%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEK--EFLVEVLMLSLMRHPNLVHLIGY 137
+G G FG V++ + G VAVK L + F E+ EFL EV ++ +RHPN+V +G
Sbjct: 45 IGAGSFGTVHRAEW--HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGA 102
Query: 138 CAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPV 197
+ +V EY+ GSL LL + + LD R+ +A A+G+ YLHN+ +PP+
Sbjct: 103 VTQPPNLSIVTEYLSRGSLY-RLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR-NPPI 160
Query: 198 IYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTGKLTA 257
++RDLK+ N+L+ K + K+ DFGL++ S GT + APE
Sbjct: 161 VHRDLKSPNLLVDKKYTVKVCDFGLSRL--KASXFLXSKXAAGTPEWMAPEVLRDEPSNE 218
Query: 258 KSDIFSFGVVLLELIT 273
KSD++SFGV+L EL T
Sbjct: 219 KSDVYSFGVILWELAT 234
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 119 bits (297), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 73/196 (37%), Positives = 111/196 (56%), Gaps = 8/196 (4%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEK--EFLVEVLMLSLMRHPNLVHLIGY 137
+G G FG V++ + G VAVK L + F E+ EFL EV ++ +RHPN+V +G
Sbjct: 45 IGAGSFGTVHRAEW--HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGA 102
Query: 138 CAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPV 197
+ +V EY+ GSL LL + + LD R+ +A A+G+ YLHN+ +PP+
Sbjct: 103 VTQPPNLSIVTEYLSRGSLY-RLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR-NPPI 160
Query: 198 IYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTGKLTA 257
++R+LK+ N+L+ K + K+ DFGL++ + S S GT + APE
Sbjct: 161 VHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLS--SKSAAGTPEWMAPEVLRDEPSNE 218
Query: 258 KSDIFSFGVVLLELIT 273
KSD++SFGV+L EL T
Sbjct: 219 KSDVYSFGVILWELAT 234
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 109 bits (272), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 116/215 (53%), Gaps = 25/215 (11%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGE-------KEFLVEVLMLSLMRHPNLV 132
+G+GGFG V+KG+L + VVA+K L +GE +EF EV ++S + HPN+V
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 133 HLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNK 192
L G + +V E++P G L LL + P+ W+ ++++ A G+EY+ N+
Sbjct: 87 KLYGLMHNPPR--MVMEFVPCGDLYHRLLD---KAHPIKWSVKLRLMLDIALGIEYMQNQ 141
Query: 193 ADPPVIYRDLKAGNILL-----GKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAP 247
+PP+++RDL++ NI L K++DFGL++ H + ++G + AP
Sbjct: 142 -NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ-----QSVHSVSGLLGNFQWMAP 195
Query: 248 EY--ATTGKLTAKSDIFSFGVVLLELITGRPAMDD 280
E A T K+D +SF ++L ++TG D+
Sbjct: 196 ETIGAEEESYTEKADTYSFAMILYTILTGEGPFDE 230
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 112/210 (53%), Gaps = 15/210 (7%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGE-------KEFLVEVLMLSLMRHPNLV 132
+G+GGFG V+KG+L + VVA+K L +GE +EF EV ++S + HPN+V
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 133 HLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNK 192
L G + +V E++P G L LL + P+ W+ ++++ A G+EY+ N+
Sbjct: 87 KLYGLMHNPPR--MVMEFVPCGDLYHRLLD---KAHPIKWSVKLRLMLDIALGIEYMQNQ 141
Query: 193 ADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEY--A 250
+PP+++RDL++ NI L +A FG + H + ++G + APE A
Sbjct: 142 -NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSVHSVSGLLGNFQWMAPETIGA 200
Query: 251 TTGKLTAKSDIFSFGVVLLELITGRPAMDD 280
T K+D +SF ++L ++TG D+
Sbjct: 201 EEESYTEKADTYSFAMILYTILTGEGPFDE 230
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 107 bits (266), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 115/215 (53%), Gaps = 25/215 (11%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGE-------KEFLVEVLMLSLMRHPNLV 132
+G+GGFG V+KG+L + VVA+K L +GE +EF EV ++S + HPN+V
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 133 HLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNK 192
L G + +V E++P G L LL + P+ W+ ++++ A G+EY+ N+
Sbjct: 87 KLYGLMHNPPR--MVMEFVPCGDLYHRLLD---KAHPIKWSVKLRLMLDIALGIEYMQNQ 141
Query: 193 ADPPVIYRDLKAGNILL-----GKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAP 247
+PP+++RDL++ NI L K++DF L++ H + ++G + AP
Sbjct: 142 -NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ-----QSVHSVSGLLGNFQWMAP 195
Query: 248 EY--ATTGKLTAKSDIFSFGVVLLELITGRPAMDD 280
E A T K+D +SF ++L ++TG D+
Sbjct: 196 ETIGAEEESYTEKADTYSFAMILYTILTGEGPFDE 230
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 104 bits (259), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 110/216 (50%), Gaps = 11/216 (5%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLVHLIGYCA 139
LG G FG VY+G + VAVK L + + E EFL E ++ ++HPNLV L+G C
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 140 EGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIY 199
++ E+M G+L D+L + + + +A + +EYL K I+
Sbjct: 78 REPPFYIITEFMTYGNLLDYLRECN--RQEVSAVVLLYMATQISSAMEYLEKKN---FIH 132
Query: 200 RDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTGKLTAKS 259
RDL A N L+G+ K++DFGL++ TGD + APE K + KS
Sbjct: 133 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTXTAHAGAKFPIKWTAPESLAYNKFSIKS 191
Query: 260 DIFSFGVVLLELIT----GRPAMDDSQGHERMLVDW 291
D+++FGV+L E+ T P +D SQ +E + D+
Sbjct: 192 DVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDY 227
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 111/216 (51%), Gaps = 11/216 (5%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLVHLIGYCA 139
LG G +G VY+G + VAVK L + + E EFL E ++ ++HPNLV L+G C
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 80
Query: 140 EGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIY 199
++ E+M G+L D+L + ++ + +A + +EYL K I+
Sbjct: 81 REPPFYIIIEFMTYGNLLDYLRECN--RQEVNAVVLLYMATQISSAMEYLEKKN---FIH 135
Query: 200 RDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTGKLTAKS 259
RDL A N L+G+ K++DFGL++ TGD + APE K + KS
Sbjct: 136 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTXTAHAGAKFPIKWTAPESLAYNKFSIKS 194
Query: 260 DIFSFGVVLLELIT----GRPAMDDSQGHERMLVDW 291
D+++FGV+L E+ T P +D SQ +E + D+
Sbjct: 195 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY 230
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 111/216 (51%), Gaps = 11/216 (5%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLVHLIGYCA 139
LG G +G VY+G + VAVK L + + E EFL E ++ ++HPNLV L+G C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 140 EGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIY 199
++ E+M G+L D+L + ++ + +A + +EYL K I+
Sbjct: 85 REPPFYIIIEFMTYGNLLDYLRECN--RQEVNAVVLLYMATQISSAMEYLEKKN---FIH 139
Query: 200 RDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTGKLTAKS 259
RDL A N L+G+ K++DFGL++ TGD + APE K + KS
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 198
Query: 260 DIFSFGVVLLELIT----GRPAMDDSQGHERMLVDW 291
D+++FGV+L E+ T P +D SQ +E + D+
Sbjct: 199 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY 234
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 111/216 (51%), Gaps = 11/216 (5%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLVHLIGYCA 139
LG G +G VY+G + VAVK L + + E EFL E ++ ++HPNLV L+G C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 140 EGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIY 199
++ E+M G+L D+L + ++ + +A + +EYL K I+
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECN--RQEVNAVVLLYMATQISSAMEYLEKKN---FIH 139
Query: 200 RDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTGKLTAKS 259
RDL A N L+G+ K++DFGL++ TGD + APE K + KS
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTXTAHAGAKFPIKWTAPESLAYNKFSIKS 198
Query: 260 DIFSFGVVLLELIT----GRPAMDDSQGHERMLVDW 291
D+++FGV+L E+ T P +D SQ +E + D+
Sbjct: 199 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY 234
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 110/216 (50%), Gaps = 11/216 (5%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLVHLIGYCA 139
LG G +G VY+G + VAVK L + + E EFL E ++ ++HPNLV L+G C
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 140 EGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIY 199
++ E+M G+L D+L + + + +A + +EYL K I+
Sbjct: 78 REPPFYIIIEFMTYGNLLDYLRECN--RQEVSAVVLLYMATQISSAMEYLEKKN---FIH 132
Query: 200 RDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTGKLTAKS 259
RDL A N L+G+ K++DFGL++ TGD + APE K + KS
Sbjct: 133 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTXTAHAGAKFPIKWTAPESLAYNKFSIKS 191
Query: 260 DIFSFGVVLLELIT----GRPAMDDSQGHERMLVDW 291
D+++FGV+L E+ T P +D SQ +E + D+
Sbjct: 192 DVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDY 227
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 111/216 (51%), Gaps = 11/216 (5%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLVHLIGYCA 139
LG G +G VY+G + VAVK L + + E EFL E ++ ++HPNLV L+G C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 140 EGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIY 199
++ E+M G+L D+L + ++ + +A + +EYL K I+
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECN--RQEVNAVVLLYMATQISSAMEYLEKKN---FIH 139
Query: 200 RDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTGKLTAKS 259
RDL A N L+G+ K++DFGL++ TGD + APE K + KS
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 198
Query: 260 DIFSFGVVLLELIT----GRPAMDDSQGHERMLVDW 291
D+++FGV+L E+ T P +D SQ +E + D+
Sbjct: 199 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY 234
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 111/216 (51%), Gaps = 11/216 (5%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLVHLIGYCA 139
LG G +G VY+G + VAVK L + + E EFL E ++ ++HPNLV L+G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 140 EGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIY 199
++ E+M G+L D+L + ++ + +A + +EYL K I+
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECN--RQEVNAVVLLYMATQISSAMEYLEKKN---FIH 134
Query: 200 RDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTGKLTAKS 259
RDL A N L+G+ K++DFGL++ TGD + APE K + KS
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
Query: 260 DIFSFGVVLLELIT----GRPAMDDSQGHERMLVDW 291
D+++FGV+L E+ T P +D SQ +E + D+
Sbjct: 194 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY 229
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 111/216 (51%), Gaps = 11/216 (5%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLVHLIGYCA 139
LG G +G VY+G + VAVK L + + E EFL E ++ ++HPNLV L+G C
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 80
Query: 140 EGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIY 199
++ E+M G+L D+L + ++ + +A + +EYL K I+
Sbjct: 81 REPPFYIITEFMTYGNLLDYLRECN--RQEVNAVVLLYMATQISSAMEYLEKKN---FIH 135
Query: 200 RDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTGKLTAKS 259
RDL A N L+G+ K++DFGL++ TGD + APE K + KS
Sbjct: 136 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAPAGAKFPIKWTAPESLAYNKFSIKS 194
Query: 260 DIFSFGVVLLELIT----GRPAMDDSQGHERMLVDW 291
D+++FGV+L E+ T P +D SQ +E + D+
Sbjct: 195 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY 230
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 111/216 (51%), Gaps = 11/216 (5%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLVHLIGYCA 139
LG G +G VY+G + VAVK L + + E EFL E ++ ++HPNLV L+G C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 140 EGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIY 199
++ E+M G+L D+L + ++ + +A + +EYL K I+
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECN--RQEVNAVVLLYMATQISSAMEYLEKKN---FIH 139
Query: 200 RDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTGKLTAKS 259
RDL A N L+G+ K++DFGL++ TGD + APE K + KS
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 198
Query: 260 DIFSFGVVLLELIT----GRPAMDDSQGHERMLVDW 291
D+++FGV+L E+ T P +D SQ +E + D+
Sbjct: 199 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY 234
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 111/216 (51%), Gaps = 11/216 (5%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLVHLIGYCA 139
LG G +G VY+G + VAVK L + + E EFL E ++ ++HPNLV L+G C
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 83
Query: 140 EGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIY 199
++ E+M G+L D+L + ++ + +A + +EYL K I+
Sbjct: 84 REPPFYIITEFMTYGNLLDYLRECN--RQEVNAVVLLYMATQISSAMEYLEKKN---FIH 138
Query: 200 RDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTGKLTAKS 259
RDL A N L+G+ K++DFGL++ TGD + APE K + KS
Sbjct: 139 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 197
Query: 260 DIFSFGVVLLELIT----GRPAMDDSQGHERMLVDW 291
D+++FGV+L E+ T P +D SQ +E + D+
Sbjct: 198 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY 233
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 111/216 (51%), Gaps = 11/216 (5%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLVHLIGYCA 139
LG G +G VY+G + VAVK L + + E EFL E ++ ++HPNLV L+G C
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 92
Query: 140 EGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIY 199
++ E+M G+L D+L + ++ + +A + +EYL K I+
Sbjct: 93 REPPFYIITEFMTYGNLLDYLRECN--RQEVNAVVLLYMATQISSAMEYLEKKN---FIH 147
Query: 200 RDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTGKLTAKS 259
RDL A N L+G+ K++DFGL++ TGD + APE K + KS
Sbjct: 148 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 206
Query: 260 DIFSFGVVLLELIT----GRPAMDDSQGHERMLVDW 291
D+++FGV+L E+ T P +D SQ +E + D+
Sbjct: 207 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY 242
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 111/216 (51%), Gaps = 11/216 (5%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLVHLIGYCA 139
LG G +G VY+G + VAVK L + + E EFL E ++ ++HPNLV L+G C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 140 EGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIY 199
++ E+M G+L D+L + ++ + +A + +EYL K I+
Sbjct: 82 REPPFYIITEFMTYGNLLDYLRECN--RQEVNAVVLLYMATQISSAMEYLEKKN---FIH 136
Query: 200 RDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTGKLTAKS 259
RDL A N L+G+ K++DFGL++ TGD + APE K + KS
Sbjct: 137 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAPAGAKFPIKWTAPESLAYNKFSIKS 195
Query: 260 DIFSFGVVLLELIT----GRPAMDDSQGHERMLVDW 291
D+++FGV+L E+ T P +D SQ +E + D+
Sbjct: 196 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY 231
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 111/216 (51%), Gaps = 11/216 (5%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLVHLIGYCA 139
LG G +G VY+G + VAVK L + + E EFL E ++ ++HPNLV L+G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 140 EGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIY 199
++ E+M G+L D+L + ++ + +A + +EYL K I+
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECN--RQEVNAVVLLYMATQISSAMEYLEKKN---FIH 134
Query: 200 RDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTGKLTAKS 259
RDL A N L+G+ K++DFGL++ TGD + APE K + KS
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
Query: 260 DIFSFGVVLLELIT----GRPAMDDSQGHERMLVDW 291
D+++FGV+L E+ T P +D SQ +E + D+
Sbjct: 194 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY 229
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 102 bits (254), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 111/216 (51%), Gaps = 11/216 (5%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLVHLIGYCA 139
LG G +G VY+G + VAVK L + + E EFL E ++ ++HPNLV L+G C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 140 EGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIY 199
++ E+M G+L D+L + ++ + +A + +EYL K I+
Sbjct: 82 REPPFYIITEFMTYGNLLDYLRECN--RQEVNAVVLLYMATQISSAMEYLEKKN---FIH 136
Query: 200 RDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTGKLTAKS 259
RDL A N L+G+ K++DFGL++ TGD + APE K + KS
Sbjct: 137 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 195
Query: 260 DIFSFGVVLLELIT----GRPAMDDSQGHERMLVDW 291
D+++FGV+L E+ T P +D SQ +E + D+
Sbjct: 196 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY 231
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 102 bits (254), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 111/216 (51%), Gaps = 11/216 (5%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLVHLIGYCA 139
LG G +G VY+G + VAVK L + + E EFL E ++ ++HPNLV L+G C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 140 EGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIY 199
++ E+M G+L D+L + ++ + +A + +EYL K I+
Sbjct: 82 REPPFYIITEFMTYGNLLDYLRECN--RQEVNAVVLLYMATQISSAMEYLEKKN---FIH 136
Query: 200 RDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTGKLTAKS 259
RDL A N L+G+ K++DFGL++ TGD + APE K + KS
Sbjct: 137 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 195
Query: 260 DIFSFGVVLLELIT----GRPAMDDSQGHERMLVDW 291
D+++FGV+L E+ T P +D SQ +E + D+
Sbjct: 196 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY 231
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 102 bits (253), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 110/216 (50%), Gaps = 11/216 (5%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLVHLIGYCA 139
LG G +G VY+G + VAVK L + + E EFL E ++ ++HPNLV L+G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 140 EGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIY 199
++ E+M G+L D+L + + + +A + +EYL K I+
Sbjct: 80 REPPFYIIIEFMTYGNLLDYLRECN--RQEVSAVVLLYMATQISSAMEYLEKKN---FIH 134
Query: 200 RDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTGKLTAKS 259
RDL A N L+G+ K++DFGL++ TGD + APE K + KS
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
Query: 260 DIFSFGVVLLELIT----GRPAMDDSQGHERMLVDW 291
D+++FGV+L E+ T P +D SQ +E + D+
Sbjct: 194 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY 229
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 102 bits (253), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 110/216 (50%), Gaps = 11/216 (5%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLVHLIGYCA 139
LG G +G VY+G + VAVK L + + E EFL E ++ ++HPNLV L+G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 140 EGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIY 199
++ E+M G+L D+L + + + +A + +EYL K I+
Sbjct: 80 REPPFYIIIEFMTYGNLLDYLRECN--RQEVSAVVLLYMATQISSAMEYLEKKN---FIH 134
Query: 200 RDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTGKLTAKS 259
RDL A N L+G+ K++DFGL++ TGD + APE K + KS
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
Query: 260 DIFSFGVVLLELIT----GRPAMDDSQGHERMLVDW 291
D+++FGV+L E+ T P +D SQ +E + D+
Sbjct: 194 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY 229
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 102 bits (253), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 110/216 (50%), Gaps = 11/216 (5%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLVHLIGYCA 139
LG G +G VY+G + VAVK L + + E EFL E ++ ++HPNLV L+G C
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 140 EGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIY 199
++ E+M G+L D+L + + + +A + +EYL K I+
Sbjct: 78 REPPFYIITEFMTYGNLLDYLRECN--RQEVSAVVLLYMATQISSAMEYLEKKN---FIH 132
Query: 200 RDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTGKLTAKS 259
RDL A N L+G+ K++DFGL++ TGD + APE K + KS
Sbjct: 133 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTFTAHAGAKFPIKWTAPESLAYNKFSIKS 191
Query: 260 DIFSFGVVLLELIT----GRPAMDDSQGHERMLVDW 291
D+++FGV+L E+ T P +D SQ +E + D+
Sbjct: 192 DVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDY 227
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 102 bits (253), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 110/216 (50%), Gaps = 11/216 (5%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLVHLIGYCA 139
LG G +G VY+G + VAVK L + + E EFL E ++ ++HPNLV L+G C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 140 EGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIY 199
++ E+M G+L D+L + + + +A + +EYL K I+
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECN--RQEVSAVVLLYMATQISSAMEYLEKKN---FIH 139
Query: 200 RDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTGKLTAKS 259
RDL A N L+G+ K++DFGL++ TGD + APE K + KS
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 198
Query: 260 DIFSFGVVLLELIT----GRPAMDDSQGHERMLVDW 291
D+++FGV+L E+ T P +D SQ +E + D+
Sbjct: 199 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY 234
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 102 bits (253), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 110/216 (50%), Gaps = 11/216 (5%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLVHLIGYCA 139
LG G +G VY+G + VAVK L + + E EFL E ++ ++HPNLV L+G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 140 EGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIY 199
++ E+M G+L D+L + + + +A + +EYL K I+
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECN--RQEVSAVVLLYMATQISSAMEYLEKKN---FIH 134
Query: 200 RDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTGKLTAKS 259
RDL A N L+G+ K++DFGL++ TGD + APE K + KS
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
Query: 260 DIFSFGVVLLELIT----GRPAMDDSQGHERMLVDW 291
D+++FGV+L E+ T P +D SQ +E + D+
Sbjct: 194 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY 229
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/202 (35%), Positives = 104/202 (51%), Gaps = 15/202 (7%)
Query: 80 LGQGGFGAV----YKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLVHLI 135
LG+G FG+V Y TG+VVAVK+L + + ++F E+ +L ++H N+V
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 136 GYCAEGTQR--LLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKA 193
G C +R L+ EY+P GSL D+ L + +D ++ + +G+EYL K
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSLRDY---LQAHAERIDHIKLLQYTSQICKGMEYLGTKR 137
Query: 194 DPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHG--YCAPEYAT 251
I+RDL NIL+ K+ DFGL K P DK + G + APE T
Sbjct: 138 ---YIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPESLT 193
Query: 252 TGKLTAKSDIFSFGVVLLELIT 273
K + SD++SFGVVL EL T
Sbjct: 194 ESKFSVASDVWSFGVVLYELFT 215
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 101 bits (252), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 110/216 (50%), Gaps = 11/216 (5%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLVHLIGYCA 139
LG G +G VY+G + VAVK L + + E EFL E ++ ++HPNLV L+G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 140 EGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIY 199
++ E+M G+L D+L + + + +A + +EYL K I+
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECN--RQEVSAVVLLYMATQISSAMEYLEKKN---FIH 134
Query: 200 RDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTGKLTAKS 259
RDL A N L+G+ K++DFGL++ TGD + APE K + KS
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
Query: 260 DIFSFGVVLLELIT----GRPAMDDSQGHERMLVDW 291
D+++FGV+L E+ T P +D SQ +E + D+
Sbjct: 194 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY 229
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 101 bits (252), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/202 (35%), Positives = 104/202 (51%), Gaps = 15/202 (7%)
Query: 80 LGQGGFGAV----YKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLVHLI 135
LG+G FG+V Y TG+VVAVK+L + + ++F E+ +L ++H N+V
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 136 GYCAEGTQR--LLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKA 193
G C +R L+ EY+P GSL D+ L + +D ++ + +G+EYL K
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSLRDY---LQKHKERIDHIKLLQYTSQICKGMEYLGTKR 137
Query: 194 DPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHG--YCAPEYAT 251
I+RDL NIL+ K+ DFGL K P DK + G + APE T
Sbjct: 138 ---YIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPESLT 193
Query: 252 TGKLTAKSDIFSFGVVLLELIT 273
K + SD++SFGVVL EL T
Sbjct: 194 ESKFSVASDVWSFGVVLYELFT 215
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 101 bits (252), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/202 (35%), Positives = 104/202 (51%), Gaps = 15/202 (7%)
Query: 80 LGQGGFGAV----YKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLVHLI 135
LG+G FG+V Y TG+VVAVK+L + + ++F E+ +L ++H N+V
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 76
Query: 136 GYCAEGTQR--LLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKA 193
G C +R L+ EY+P GSL D+ L + +D ++ + +G+EYL K
Sbjct: 77 GVCYSAGRRNLKLIMEYLPYGSLRDY---LQKHKERIDHIKLLQYTSQICKGMEYLGTKR 133
Query: 194 DPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHG--YCAPEYAT 251
I+RDL NIL+ K+ DFGL K P DK + G + APE T
Sbjct: 134 ---YIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPESLT 189
Query: 252 TGKLTAKSDIFSFGVVLLELIT 273
K + SD++SFGVVL EL T
Sbjct: 190 ESKFSVASDVWSFGVVLYELFT 211
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/202 (35%), Positives = 104/202 (51%), Gaps = 15/202 (7%)
Query: 80 LGQGGFGAV----YKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLVHLI 135
LG+G FG+V Y TG+VVAVK+L + + ++F E+ +L ++H N+V
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 82
Query: 136 GYCAEGTQR--LLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKA 193
G C +R L+ EY+P GSL D+ L + +D ++ + +G+EYL K
Sbjct: 83 GVCYSAGRRNLKLIMEYLPYGSLRDY---LQKHKERIDHIKLLQYTSQICKGMEYLGTKR 139
Query: 194 DPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHG--YCAPEYAT 251
I+RDL NIL+ K+ DFGL K P DK + G + APE T
Sbjct: 140 ---YIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPESLT 195
Query: 252 TGKLTAKSDIFSFGVVLLELIT 273
K + SD++SFGVVL EL T
Sbjct: 196 ESKFSVASDVWSFGVVLYELFT 217
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 117/239 (48%), Gaps = 22/239 (9%)
Query: 52 AHENKNKENTFTYRQLVAATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVK-----QLD 106
A + KN+E+ ++ A ++F+ LG+G FG VY + ++ ++A+K QL+
Sbjct: 18 ASKQKNEES----KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLE 73
Query: 107 DTGFQGEKEFLVEVLMLSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPE 166
G E + EV + S +RHPN++ L GY + T+ L+ EY PLG++ L L+
Sbjct: 74 KAGV--EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS-- 129
Query: 167 MKPLDWNTRMKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFG 226
D A L Y H+K VI+RD+K N+LLG K++DFG +
Sbjct: 130 --KFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHA 184
Query: 227 PTGDKSHVSTRVMGTHGYCAPEYATTGKLTAKSDIFSFGVVLLELITGRPAMDDSQGHE 285
P+ + T + GT Y PE K D++S GV+ E + G+P + + E
Sbjct: 185 PSSRR----TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 239
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/202 (35%), Positives = 104/202 (51%), Gaps = 15/202 (7%)
Query: 80 LGQGGFGAV----YKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLVHLI 135
LG+G FG+V Y TG+VVAVK+L + + ++F E+ +L ++H N+V
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 81
Query: 136 GYCAEGTQR--LLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKA 193
G C +R L+ EY+P GSL D+ L + +D ++ + +G+EYL K
Sbjct: 82 GVCYSAGRRNLKLIMEYLPYGSLRDY---LQKHKERIDHIKLLQYTSQICKGMEYLGTKR 138
Query: 194 DPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHG--YCAPEYAT 251
I+RDL NIL+ K+ DFGL K P DK + G + APE T
Sbjct: 139 ---YIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPESLT 194
Query: 252 TGKLTAKSDIFSFGVVLLELIT 273
K + SD++SFGVVL EL T
Sbjct: 195 ESKFSVASDVWSFGVVLYELFT 216
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/202 (35%), Positives = 104/202 (51%), Gaps = 15/202 (7%)
Query: 80 LGQGGFGAV----YKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLVHLI 135
LG+G FG+V Y TG+VVAVK+L + + ++F E+ +L ++H N+V
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 136 GYCAEGTQR--LLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKA 193
G C +R L+ EY+P GSL D+ L + +D ++ + +G+EYL K
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDY---LQKHKERIDHIKLLQYTSQICKGMEYLGTKR 134
Query: 194 DPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHG--YCAPEYAT 251
I+RDL NIL+ K+ DFGL K P DK + G + APE T
Sbjct: 135 ---YIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPESLT 190
Query: 252 TGKLTAKSDIFSFGVVLLELIT 273
K + SD++SFGVVL EL T
Sbjct: 191 ESKFSVASDVWSFGVVLYELFT 212
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/202 (35%), Positives = 104/202 (51%), Gaps = 15/202 (7%)
Query: 80 LGQGGFGAV----YKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLVHLI 135
LG+G FG+V Y TG+VVAVK+L + + ++F E+ +L ++H N+V
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 83
Query: 136 GYCAEGTQR--LLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKA 193
G C +R L+ EY+P GSL D+ L + +D ++ + +G+EYL K
Sbjct: 84 GVCYSAGRRNLKLIMEYLPYGSLRDY---LQKHKERIDHIKLLQYTSQICKGMEYLGTKR 140
Query: 194 DPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHG--YCAPEYAT 251
I+RDL NIL+ K+ DFGL K P DK + G + APE T
Sbjct: 141 ---YIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPESLT 196
Query: 252 TGKLTAKSDIFSFGVVLLELIT 273
K + SD++SFGVVL EL T
Sbjct: 197 ESKFSVASDVWSFGVVLYELFT 218
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/202 (35%), Positives = 104/202 (51%), Gaps = 15/202 (7%)
Query: 80 LGQGGFGAV----YKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLVHLI 135
LG+G FG+V Y TG+VVAVK+L + + ++F E+ +L ++H N+V
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 75
Query: 136 GYCAEGTQR--LLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKA 193
G C +R L+ EY+P GSL D+ L + +D ++ + +G+EYL K
Sbjct: 76 GVCYSAGRRNLKLIMEYLPYGSLRDY---LQKHKERIDHIKLLQYTSQICKGMEYLGTKR 132
Query: 194 DPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHG--YCAPEYAT 251
I+RDL NIL+ K+ DFGL K P DK + G + APE T
Sbjct: 133 ---YIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPESLT 188
Query: 252 TGKLTAKSDIFSFGVVLLELIT 273
K + SD++SFGVVL EL T
Sbjct: 189 ESKFSVASDVWSFGVVLYELFT 210
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 101 bits (251), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 117/239 (48%), Gaps = 22/239 (9%)
Query: 52 AHENKNKENTFTYRQLVAATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVK-----QLD 106
A + KN+E+ ++ A ++F+ LG+G FG VY + ++ ++A+K QL+
Sbjct: 9 ASKQKNEES----KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLE 64
Query: 107 DTGFQGEKEFLVEVLMLSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPE 166
G E + EV + S +RHPN++ L GY + T+ L+ EY PLG++ L L+
Sbjct: 65 KAGV--EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS-- 120
Query: 167 MKPLDWNTRMKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFG 226
D A L Y H+K VI+RD+K N+LLG K++DFG +
Sbjct: 121 --KFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHA 175
Query: 227 PTGDKSHVSTRVMGTHGYCAPEYATTGKLTAKSDIFSFGVVLLELITGRPAMDDSQGHE 285
P+ + T + GT Y PE K D++S GV+ E + G+P + + E
Sbjct: 176 PSSRR----TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 230
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 101 bits (251), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/202 (35%), Positives = 104/202 (51%), Gaps = 15/202 (7%)
Query: 80 LGQGGFGAV----YKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLVHLI 135
LG+G FG+V Y TG+VVAVK+L + + ++F E+ +L ++H N+V
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 108
Query: 136 GYCAEGTQR--LLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKA 193
G C +R L+ EY+P GSL D+ L + +D ++ + +G+EYL K
Sbjct: 109 GVCYSAGRRNLKLIMEYLPYGSLRDY---LQKHKERIDHIKLLQYTSQICKGMEYLGTKR 165
Query: 194 DPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHG--YCAPEYAT 251
I+RDL NIL+ K+ DFGL K P DK + G + APE T
Sbjct: 166 ---YIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPESLT 221
Query: 252 TGKLTAKSDIFSFGVVLLELIT 273
K + SD++SFGVVL EL T
Sbjct: 222 ESKFSVASDVWSFGVVLYELFT 243
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 101 bits (251), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/202 (35%), Positives = 104/202 (51%), Gaps = 15/202 (7%)
Query: 80 LGQGGFGAV----YKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLVHLI 135
LG+G FG+V Y TG+VVAVK+L + + ++F E+ +L ++H N+V
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 84
Query: 136 GYCAEGTQR--LLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKA 193
G C +R L+ EY+P GSL D+ L + +D ++ + +G+EYL K
Sbjct: 85 GVCYSAGRRNLKLIMEYLPYGSLRDY---LQKHKERIDHIKLLQYTSQICKGMEYLGTKR 141
Query: 194 DPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHG--YCAPEYAT 251
I+RDL NIL+ K+ DFGL K P DK + G + APE T
Sbjct: 142 ---YIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPESLT 197
Query: 252 TGKLTAKSDIFSFGVVLLELIT 273
K + SD++SFGVVL EL T
Sbjct: 198 ESKFSVASDVWSFGVVLYELFT 219
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 101 bits (251), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 72/202 (35%), Positives = 104/202 (51%), Gaps = 15/202 (7%)
Query: 80 LGQGGFGAV----YKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLVHLI 135
LG+G FG+V Y TG+VVAVK+L + + ++F E+ +L ++H N+V
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 136 GYCAEGTQR--LLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKA 193
G C +R L+ EY+P GSL D+ L + +D ++ + +G+EYL K
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDY---LQKHKERIDHIKLLQYTSQICKGMEYLGTKR 134
Query: 194 DPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHG--YCAPEYAT 251
I+RDL NIL+ K+ DFGL K P DK + G + APE T
Sbjct: 135 ---YIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPESLT 190
Query: 252 TGKLTAKSDIFSFGVVLLELIT 273
K + SD++SFGVVL EL T
Sbjct: 191 ESKFSVASDVWSFGVVLYELFT 212
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 101 bits (251), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 104/202 (51%), Gaps = 12/202 (5%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLD-DTGFQGEKEFLVEVLMLSLMRHPNLVHLIGYC 138
LG+G +G+VYK ETGQ+VA+KQ+ ++ Q E + E+ ++ P++V G
Sbjct: 37 LGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQ---EIIKEISIMQQCDSPHVVKYYGSY 93
Query: 139 AEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVI 198
+ T +V EY GS+ D ++ L K L + I +GLEYLH I
Sbjct: 94 FKNTDLWIVMEYCGAGSVSD-IIRL--RNKTLTEDEIATILQSTLKGLEYLHFMRK---I 147
Query: 199 YRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTGKLTAK 258
+RD+KAGNILL H KL+DFG+A G D V+GT + APE
Sbjct: 148 HRDIKAGNILLNTEGHAKLADFGVA--GQLTDXMAKRNXVIGTPFWMAPEVIQEIGYNCV 205
Query: 259 SDIFSFGVVLLELITGRPAMDD 280
+DI+S G+ +E+ G+P D
Sbjct: 206 ADIWSLGITAIEMAEGKPPYAD 227
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 101 bits (251), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 72/202 (35%), Positives = 104/202 (51%), Gaps = 15/202 (7%)
Query: 80 LGQGGFGAV----YKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLVHLI 135
LG+G FG+V Y TG+VVAVK+L + + ++F E+ +L ++H N+V
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 136 GYCAEGTQR--LLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKA 193
G C +R L+ EY+P GSL D+ L + +D ++ + +G+EYL K
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDY---LQKHKERIDHIKLLQYTSQICKGMEYLGTKR 152
Query: 194 DPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHG--YCAPEYAT 251
I+RDL NIL+ K+ DFGL K P DK + G + APE T
Sbjct: 153 ---YIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPESLT 208
Query: 252 TGKLTAKSDIFSFGVVLLELIT 273
K + SD++SFGVVL EL T
Sbjct: 209 ESKFSVASDVWSFGVVLYELFT 230
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 101 bits (251), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 72/202 (35%), Positives = 104/202 (51%), Gaps = 15/202 (7%)
Query: 80 LGQGGFGAV----YKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLVHLI 135
LG+G FG+V Y TG+VVAVK+L + + ++F E+ +L ++H N+V
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 136 GYCAEGTQR--LLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKA 193
G C +R L+ EY+P GSL D+ L + +D ++ + +G+EYL K
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDY---LQKHKERIDHIKLLQYTSQICKGMEYLGTKR 134
Query: 194 DPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHG--YCAPEYAT 251
I+RDL NIL+ K+ DFGL K P DK + G + APE T
Sbjct: 135 ---YIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEFFKVKEPGESPIFWYAPESLT 190
Query: 252 TGKLTAKSDIFSFGVVLLELIT 273
K + SD++SFGVVL EL T
Sbjct: 191 ESKFSVASDVWSFGVVLYELFT 212
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 100 bits (250), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 103/210 (49%), Gaps = 19/210 (9%)
Query: 80 LGQGGFGAVYKGKL-----AETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLVHL 134
LG+G FG V+ + + +VAVK L + ++F E +L++++H ++V
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 135 IGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMK-----------PLDWNTRMKIAAGAA 183
G C EG L+V+EYM G L L P+ K PL + +A+ A
Sbjct: 86 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 145
Query: 184 RGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHG 243
G+ YL A ++RDL N L+G+G K+ DFG+++ + D V R M
Sbjct: 146 AGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 202
Query: 244 YCAPEYATTGKLTAKSDIFSFGVVLLELIT 273
+ PE K T +SD++SFGVVL E+ T
Sbjct: 203 WMPPESILYRKFTTESDVWSFGVVLWEIFT 232
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 100 bits (250), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 103/210 (49%), Gaps = 19/210 (9%)
Query: 80 LGQGGFGAVYKGKL-----AETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLVHL 134
LG+G FG V+ + + +VAVK L + ++F E +L++++H ++V
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 135 IGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMK-----------PLDWNTRMKIAAGAA 183
G C EG L+V+EYM G L L P+ K PL + +A+ A
Sbjct: 80 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 139
Query: 184 RGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHG 243
G+ YL A ++RDL N L+G+G K+ DFG+++ + D V R M
Sbjct: 140 AGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 196
Query: 244 YCAPEYATTGKLTAKSDIFSFGVVLLELIT 273
+ PE K T +SD++SFGVVL E+ T
Sbjct: 197 WMPPESILYRKFTTESDVWSFGVVLWEIFT 226
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 100 bits (250), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 72/212 (33%), Positives = 107/212 (50%), Gaps = 11/212 (5%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLVHLIGYCA 139
LG G +G VY G + VAVK L + + E EFL E ++ ++HPNLV L+G C
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 98
Query: 140 EGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIY 199
+V EYMP G+L D+L E + + +A + +EYL K I+
Sbjct: 99 LEPPFYIVTEYMPYGNLLDYLRECNRE--EVTAVVLLYMATQISSAMEYLEKKN---FIH 153
Query: 200 RDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTGKLTAKS 259
RDL A N L+G+ K++DFGL++ TGD + APE + KS
Sbjct: 154 RDLAARNCLVGENHVVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNTFSIKS 212
Query: 260 DIFSFGVVLLELIT----GRPAMDDSQGHERM 287
D+++FGV+L E+ T P +D SQ ++ +
Sbjct: 213 DVWAFGVLLWEIATYGMSPYPGIDLSQVYDLL 244
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 100 bits (250), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 105/202 (51%), Gaps = 15/202 (7%)
Query: 80 LGQGGFGAV----YKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLVHLI 135
LG+G FG+V Y TG+VVAVK+L + + ++F E+ +L ++H N+V
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 78
Query: 136 GYCAEGTQR--LLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKA 193
G C +R L+ EY+P GSL D+ L + +D ++ + +G+EYL K
Sbjct: 79 GVCYSAGRRNLKLIMEYLPYGSLRDY---LQKHKERIDHIKLLQYTSQICKGMEYLGTKR 135
Query: 194 DPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHG--YCAPEYAT 251
I+R+L NIL+ K+ DFGL K P DK + + G + APE T
Sbjct: 136 ---YIHRNLATRNILVENENRVKIGDFGLTKVLPQ-DKEYYKVKEPGESPIFWYAPESLT 191
Query: 252 TGKLTAKSDIFSFGVVLLELIT 273
K + SD++SFGVVL EL T
Sbjct: 192 ESKFSVASDVWSFGVVLYELFT 213
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 100 bits (250), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 72/202 (35%), Positives = 104/202 (51%), Gaps = 15/202 (7%)
Query: 80 LGQGGFGAV----YKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLVHLI 135
LG+G FG+V Y TG+VVAVK+L + + ++F E+ +L ++H N+V
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 136 GYCAEGTQR--LLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKA 193
G C +R L+ EY+P GSL D+ L + +D ++ + +G+EYL K
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDY---LQKHKERIDHIKLLQYTSQICKGMEYLGTKR 152
Query: 194 DPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHG--YCAPEYAT 251
I+RDL NIL+ K+ DFGL K P DK + G + APE T
Sbjct: 153 ---YIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPESLT 208
Query: 252 TGKLTAKSDIFSFGVVLLELIT 273
K + SD++SFGVVL EL T
Sbjct: 209 ESKFSVASDVWSFGVVLYELFT 230
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 100 bits (249), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 108/221 (48%), Gaps = 18/221 (8%)
Query: 70 ATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVK-----QLDDTGFQGEKEFLVEVLMLS 124
A ++F+ LG+G FG VY + ++ ++A+K QL+ G E + EV + S
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV--EHQLRREVEIQS 63
Query: 125 LMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAAR 184
+RHPN++ L GY + T+ L+ EY PLG++ L L+ D A
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS----KFDEQRTATYITELAN 119
Query: 185 GLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGY 244
L Y H+K VI+RD+K N+LLG K++DFG + P+ + T + GT Y
Sbjct: 120 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TELCGTLDY 172
Query: 245 CAPEYATTGKLTAKSDIFSFGVVLLELITGRPAMDDSQGHE 285
PE K D++S GV+ E + G+P + + E
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 213
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 100 bits (249), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 108/221 (48%), Gaps = 18/221 (8%)
Query: 70 ATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVK-----QLDDTGFQGEKEFLVEVLMLS 124
A ++F+ LG+G FG VY + ++ ++A+K QL+ G E + EV + S
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV--EHQLRREVEIQS 68
Query: 125 LMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAAR 184
+RHPN++ L GY + T+ L+ EY PLG++ L L+ D A
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS----KFDEQRTATYITELAN 124
Query: 185 GLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGY 244
L Y H+K VI+RD+K N+LLG K++DFG + P+ + T + GT Y
Sbjct: 125 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDY 177
Query: 245 CAPEYATTGKLTAKSDIFSFGVVLLELITGRPAMDDSQGHE 285
PE K D++S GV+ E + G+P + + E
Sbjct: 178 LPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 218
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 108/221 (48%), Gaps = 18/221 (8%)
Query: 70 ATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVK-----QLDDTGFQGEKEFLVEVLMLS 124
A ++F+ LG+G FG VY + ++ ++A+K QL+ G E + EV + S
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV--EHQLRREVEIQS 66
Query: 125 LMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAAR 184
+RHPN++ L GY + T+ L+ EY PLG++ L L+ D A
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS----KFDEQRTATYITELAN 122
Query: 185 GLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGY 244
L Y H+K VI+RD+K N+LLG K++DFG + P+ + T + GT Y
Sbjct: 123 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDY 175
Query: 245 CAPEYATTGKLTAKSDIFSFGVVLLELITGRPAMDDSQGHE 285
PE K D++S GV+ E + G+P + + E
Sbjct: 176 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 216
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 111/216 (51%), Gaps = 11/216 (5%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLVHLIGYCA 139
LG G +G VY+G + VAVK L + + E EFL E ++ ++HPNLV L+G C
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 325
Query: 140 EGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIY 199
++ E+M G+L D+L + ++ + +A + +EYL K I+
Sbjct: 326 REPPFYIITEFMTYGNLLDYLRECN--RQEVNAVVLLYMATQISSAMEYLEKKN---FIH 380
Query: 200 RDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTGKLTAKS 259
R+L A N L+G+ K++DFGL++ TGD + APE K + KS
Sbjct: 381 RNLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 439
Query: 260 DIFSFGVVLLELIT----GRPAMDDSQGHERMLVDW 291
D+++FGV+L E+ T P +D SQ +E + D+
Sbjct: 440 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY 475
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 103/210 (49%), Gaps = 19/210 (9%)
Query: 80 LGQGGFGAVYKGKL-----AETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLVHL 134
LG+G FG V+ + + +VAVK L + ++F E +L++++H ++V
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 135 IGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMK-----------PLDWNTRMKIAAGAA 183
G C EG L+V+EYM G L L P+ K PL + +A+ A
Sbjct: 109 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 168
Query: 184 RGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHG 243
G+ YL A ++RDL N L+G+G K+ DFG+++ + D V R M
Sbjct: 169 AGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 225
Query: 244 YCAPEYATTGKLTAKSDIFSFGVVLLELIT 273
+ PE K T +SD++SFGVVL E+ T
Sbjct: 226 WMPPESILYRKFTTESDVWSFGVVLWEIFT 255
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 111/216 (51%), Gaps = 11/216 (5%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLVHLIGYCA 139
LG G +G VY+G + VAVK L + + E EFL E ++ ++HPNLV L+G C
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 283
Query: 140 EGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIY 199
++ E+M G+L D+L + ++ + +A + +EYL K I+
Sbjct: 284 REPPFYIITEFMTYGNLLDYLRECN--RQEVNAVVLLYMATQISSAMEYLEKKN---FIH 338
Query: 200 RDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTGKLTAKS 259
R+L A N L+G+ K++DFGL++ TGD + APE K + KS
Sbjct: 339 RNLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 397
Query: 260 DIFSFGVVLLELIT----GRPAMDDSQGHERMLVDW 291
D+++FGV+L E+ T P +D SQ +E + D+
Sbjct: 398 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY 433
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 109/221 (49%), Gaps = 18/221 (8%)
Query: 70 ATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVK-----QLDDTGFQGEKEFLVEVLMLS 124
A ++F+ LG+G FG VY + ++ ++A+K QL+ G E + EV + S
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV--EHQLRREVEIQS 64
Query: 125 LMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAAR 184
+RHPN++ L GY + T+ L+ EY PLG++ L L+ D A
Sbjct: 65 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS----KFDEQRTATYITELAN 120
Query: 185 GLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGY 244
L Y H+K VI+RD+K N+LLG K++DFG + P+ ++ +S GT Y
Sbjct: 121 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRTTLS----GTLDY 173
Query: 245 CAPEYATTGKLTAKSDIFSFGVVLLELITGRPAMDDSQGHE 285
PE K D++S GV+ E + G+P + + E
Sbjct: 174 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 214
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 108/221 (48%), Gaps = 18/221 (8%)
Query: 70 ATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVK-----QLDDTGFQGEKEFLVEVLMLS 124
A ++F+ LG+G FG VY + ++ ++A+K QL+ G E + EV + S
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV--EHQLRREVEIQS 68
Query: 125 LMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAAR 184
+RHPN++ L GY + T+ L+ EY PLG++ L L+ D A
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS----KFDEQRTATYITELAN 124
Query: 185 GLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGY 244
L Y H+K VI+RD+K N+LLG K++DFG + P+ + T + GT Y
Sbjct: 125 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDY 177
Query: 245 CAPEYATTGKLTAKSDIFSFGVVLLELITGRPAMDDSQGHE 285
PE K D++S GV+ E + G+P + + E
Sbjct: 178 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 218
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 108/221 (48%), Gaps = 18/221 (8%)
Query: 70 ATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVK-----QLDDTGFQGEKEFLVEVLMLS 124
A ++F+ LG+G FG VY + ++ ++A+K QL+ G E + EV + S
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV--EHQLRREVEIQS 68
Query: 125 LMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAAR 184
+RHPN++ L GY + T+ L+ EY PLG++ L L+ D A
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS----KFDEQRTATYITELAN 124
Query: 185 GLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGY 244
L Y H+K VI+RD+K N+LLG K++DFG + P+ + T + GT Y
Sbjct: 125 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TDLCGTLDY 177
Query: 245 CAPEYATTGKLTAKSDIFSFGVVLLELITGRPAMDDSQGHE 285
PE K D++S GV+ E + G+P + + E
Sbjct: 178 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 218
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 108/221 (48%), Gaps = 18/221 (8%)
Query: 70 ATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVK-----QLDDTGFQGEKEFLVEVLMLS 124
A ++F+ LG+G FG VY + ++ ++A+K QL+ G E + EV + S
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV--EHQLRREVEIQS 63
Query: 125 LMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAAR 184
+RHPN++ L GY + T+ L+ EY PLG++ L L+ D A
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS----KFDEQRTATYITELAN 119
Query: 185 GLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGY 244
L Y H+K VI+RD+K N+LLG K++DFG + P+ + T + GT Y
Sbjct: 120 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDY 172
Query: 245 CAPEYATTGKLTAKSDIFSFGVVLLELITGRPAMDDSQGHE 285
PE K D++S GV+ E + G+P + + E
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 213
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 108/221 (48%), Gaps = 18/221 (8%)
Query: 70 ATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVK-----QLDDTGFQGEKEFLVEVLMLS 124
A ++F+ LG+G FG VY + ++ ++A+K QL+ G E + EV + S
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV--EHQLRREVEIQS 64
Query: 125 LMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAAR 184
+RHPN++ L GY + T+ L+ EY PLG++ L L+ D A
Sbjct: 65 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS----KFDEQRTATYITELAN 120
Query: 185 GLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGY 244
L Y H+K VI+RD+K N+LLG K++DFG + P+ + T + GT Y
Sbjct: 121 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TDLCGTLDY 173
Query: 245 CAPEYATTGKLTAKSDIFSFGVVLLELITGRPAMDDSQGHE 285
PE K D++S GV+ E + G+P + + E
Sbjct: 174 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 214
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 110/216 (50%), Gaps = 11/216 (5%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLVHLIGYCA 139
LG G +G VY+G + VAVK L + + E EFL E ++ ++HPNLV L+G C
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 286
Query: 140 EGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIY 199
++ E+M G+L D+L + + + +A + +EYL K I+
Sbjct: 287 REPPFYIITEFMTYGNLLDYLRECN--RQEVSAVVLLYMATQISSAMEYLEKKN---FIH 341
Query: 200 RDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTGKLTAKS 259
R+L A N L+G+ K++DFGL++ TGD + APE K + KS
Sbjct: 342 RNLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 400
Query: 260 DIFSFGVVLLELIT----GRPAMDDSQGHERMLVDW 291
D+++FGV+L E+ T P +D SQ +E + D+
Sbjct: 401 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY 436
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 108/221 (48%), Gaps = 18/221 (8%)
Query: 70 ATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVK-----QLDDTGFQGEKEFLVEVLMLS 124
A ++F+ LG+G FG VY + ++ ++A+K QL+ G E + EV + S
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV--EHQLRREVEIQS 63
Query: 125 LMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAAR 184
+RHPN++ L GY + T+ L+ EY PLG++ L L+ D A
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS----KFDEQRTATYITELAN 119
Query: 185 GLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGY 244
L Y H+K VI+RD+K N+LLG K++DFG + P+ + T + GT Y
Sbjct: 120 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TDLCGTLDY 172
Query: 245 CAPEYATTGKLTAKSDIFSFGVVLLELITGRPAMDDSQGHE 285
PE K D++S GV+ E + G+P + + E
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 213
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 116/239 (48%), Gaps = 22/239 (9%)
Query: 52 AHENKNKENTFTYRQLVAATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVK-----QLD 106
A + KN+E+ ++ A ++F+ LG+G FG VY + ++ ++A+K QL+
Sbjct: 18 ASKQKNEES----KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLE 73
Query: 107 DTGFQGEKEFLVEVLMLSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPE 166
G E + EV + S +RHPN++ L GY + T+ L+ EY PLG++ L L+
Sbjct: 74 KAGV--EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS-- 129
Query: 167 MKPLDWNTRMKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFG 226
D A L Y H+K VI+RD+K N+LLG K++DFG +
Sbjct: 130 --KFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHA 184
Query: 227 PTGDKSHVSTRVMGTHGYCAPEYATTGKLTAKSDIFSFGVVLLELITGRPAMDDSQGHE 285
P+ + + GT Y PE K D++S GV+ E + G+P + + E
Sbjct: 185 PSSRRDDLC----GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 239
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 108/221 (48%), Gaps = 18/221 (8%)
Query: 70 ATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVK-----QLDDTGFQGEKEFLVEVLMLS 124
A ++F+ LG+G FG VY + ++ ++A+K QL+ G E + EV + S
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV--EHQLRREVEIQS 63
Query: 125 LMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAAR 184
+RHPN++ L GY + T+ L+ EY PLG++ L L+ D A
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS----KFDEQRTATYITELAN 119
Query: 185 GLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGY 244
L Y H+K VI+RD+K N+LLG K++DFG + P+ + T + GT Y
Sbjct: 120 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TXLCGTLDY 172
Query: 245 CAPEYATTGKLTAKSDIFSFGVVLLELITGRPAMDDSQGHE 285
PE K D++S GV+ E + G+P + + E
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 213
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 108/221 (48%), Gaps = 18/221 (8%)
Query: 70 ATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVK-----QLDDTGFQGEKEFLVEVLMLS 124
A ++F+ LG+G FG VY + ++ ++A+K QL+ G E + EV + S
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV--EHQLRREVEIQS 63
Query: 125 LMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAAR 184
+RHPN++ L GY + T+ L+ EY PLG++ L L+ D A
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS----KFDEQRTATYITELAN 119
Query: 185 GLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGY 244
L Y H+K VI+RD+K N+LLG K++DFG + P+ + T + GT Y
Sbjct: 120 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TDLCGTLDY 172
Query: 245 CAPEYATTGKLTAKSDIFSFGVVLLELITGRPAMDDSQGHE 285
PE K D++S GV+ E + G+P + + E
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 213
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 108/221 (48%), Gaps = 18/221 (8%)
Query: 70 ATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVK-----QLDDTGFQGEKEFLVEVLMLS 124
A ++F+ LG+G FG VY + ++ ++A+K QL+ G E + EV + S
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV--EHQLRREVEIQS 62
Query: 125 LMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAAR 184
+RHPN++ L GY + T+ L+ EY PLG++ L L+ D A
Sbjct: 63 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS----KFDEQRTATYITELAN 118
Query: 185 GLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGY 244
L Y H+K VI+RD+K N+LLG K++DFG + P+ + T + GT Y
Sbjct: 119 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDY 171
Query: 245 CAPEYATTGKLTAKSDIFSFGVVLLELITGRPAMDDSQGHE 285
PE K D++S GV+ E + G+P + + E
Sbjct: 172 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 212
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 108/221 (48%), Gaps = 18/221 (8%)
Query: 70 ATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVK-----QLDDTGFQGEKEFLVEVLMLS 124
A ++F+ LG+G FG VY + ++ ++A+K QL+ G E + EV + S
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV--EHQLRREVEIQS 66
Query: 125 LMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAAR 184
+RHPN++ L GY + T+ L+ EY PLG++ L L+ D A
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS----KFDEQRTATYITELAN 122
Query: 185 GLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGY 244
L Y H+K VI+RD+K N+LLG K++DFG + P+ + T + GT Y
Sbjct: 123 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDY 175
Query: 245 CAPEYATTGKLTAKSDIFSFGVVLLELITGRPAMDDSQGHE 285
PE K D++S GV+ E + G+P + + E
Sbjct: 176 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 216
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 108/221 (48%), Gaps = 18/221 (8%)
Query: 70 ATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVK-----QLDDTGFQGEKEFLVEVLMLS 124
A ++F+ LG+G FG VY + ++ ++A+K QL+ G E + EV + S
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV--EHQLRREVEIQS 67
Query: 125 LMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAAR 184
+RHPN++ L GY + T+ L+ EY PLG++ L L+ D A
Sbjct: 68 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS----KFDEQRTATYITELAN 123
Query: 185 GLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGY 244
L Y H+K VI+RD+K N+LLG K++DFG + P+ + T + GT Y
Sbjct: 124 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDY 176
Query: 245 CAPEYATTGKLTAKSDIFSFGVVLLELITGRPAMDDSQGHE 285
PE K D++S GV+ E + G+P + + E
Sbjct: 177 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 217
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 107/221 (48%), Gaps = 18/221 (8%)
Query: 70 ATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVK-----QLDDTGFQGEKEFLVEVLMLS 124
A ++F+ LG+G FG VY + ++ ++A+K QL+ G E + EV + S
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV--EHQLRREVEIQS 65
Query: 125 LMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAAR 184
+RHPN++ L GY + T+ L+ EY PLG++ L L+ D A
Sbjct: 66 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS----KFDEQRTATYITELAN 121
Query: 185 GLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGY 244
L Y H+K VI+RD+K N+LLG K++DFG + P+ + + GT Y
Sbjct: 122 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLC----GTLDY 174
Query: 245 CAPEYATTGKLTAKSDIFSFGVVLLELITGRPAMDDSQGHE 285
PE K D++S GV+ E + G+P + + E
Sbjct: 175 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 215
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 98.6 bits (244), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 108/221 (48%), Gaps = 18/221 (8%)
Query: 70 ATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVK-----QLDDTGFQGEKEFLVEVLMLS 124
A ++F+ LG+G FG VY + ++ ++A+K QL+ G E + EV + S
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV--EHQLRREVEIQS 65
Query: 125 LMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAAR 184
+RHPN++ L GY + T+ L+ EY PLG++ L L+ D A
Sbjct: 66 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS----KFDEQRTATYITELAN 121
Query: 185 GLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGY 244
L Y H+K VI+RD+K N+LLG K+++FG + P+ + T + GT Y
Sbjct: 122 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRR----TTLCGTLDY 174
Query: 245 CAPEYATTGKLTAKSDIFSFGVVLLELITGRPAMDDSQGHE 285
PE K D++S GV+ E + G+P + + E
Sbjct: 175 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 215
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 108/221 (48%), Gaps = 18/221 (8%)
Query: 70 ATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVK-----QLDDTGFQGEKEFLVEVLMLS 124
A ++F+ LG+G FG VY + ++ ++A+K QL+ G E + EV + S
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV--EHQLRREVEIQS 66
Query: 125 LMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAAR 184
+RHPN++ L GY + T+ L+ EY PLG++ L L+ D A
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS----KFDEQRTATYITELAN 122
Query: 185 GLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGY 244
L Y H+K VI+RD+K N+LLG K++DFG + P+ ++ + GT Y
Sbjct: 123 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALC----GTLDY 175
Query: 245 CAPEYATTGKLTAKSDIFSFGVVLLELITGRPAMDDSQGHE 285
PE K D++S GV+ E + G+P + + E
Sbjct: 176 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 216
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 107/221 (48%), Gaps = 18/221 (8%)
Query: 70 ATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVK-----QLDDTGFQGEKEFLVEVLMLS 124
A ++F+ LG+G FG VY + + ++A+K QL+ G E + EV + S
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGV--EHQLRREVEIQS 60
Query: 125 LMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAAR 184
+RHPN++ L GY + T+ L+ EY PLG++ L L+ D A
Sbjct: 61 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS----KFDEQRTATYITELAN 116
Query: 185 GLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGY 244
L Y H+K VI+RD+K N+LLG K++DFG + P+ + T + GT Y
Sbjct: 117 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDY 169
Query: 245 CAPEYATTGKLTAKSDIFSFGVVLLELITGRPAMDDSQGHE 285
PE K D++S GV+ E + G+P + + E
Sbjct: 170 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 210
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 108/221 (48%), Gaps = 18/221 (8%)
Query: 70 ATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVK-----QLDDTGFQGEKEFLVEVLMLS 124
A ++F+ LG+G FG VY + ++ ++A+K QL+ G E + EV + S
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV--EHQLRREVEIQS 63
Query: 125 LMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAAR 184
+RHPN++ L GY + T+ L+ EY PLG++ L L+ D A
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS----KFDEQRTATYITELAN 119
Query: 185 GLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGY 244
L Y H+K VI+RD+K N+LLG K++DFG + P+ ++ + GT Y
Sbjct: 120 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALC----GTLDY 172
Query: 245 CAPEYATTGKLTAKSDIFSFGVVLLELITGRPAMDDSQGHE 285
PE K D++S GV+ E + G+P + + E
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 213
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 70/202 (34%), Positives = 104/202 (51%), Gaps = 15/202 (7%)
Query: 80 LGQGGFGAV----YKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLVHLI 135
LG+G FG+V Y TG+VVAVK+L + + ++F E+ +L ++H N+V
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 136 GYCAEGTQR--LLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKA 193
G C +R L+ E++P GSL ++ L + +D ++ + +G+EYL K
Sbjct: 81 GVCYSAGRRNLKLIMEFLPYGSLREY---LQKHKERIDHIKLLQYTSQICKGMEYLGTKR 137
Query: 194 DPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHG--YCAPEYAT 251
I+RDL NIL+ K+ DFGL K P DK + G + APE T
Sbjct: 138 ---YIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPESLT 193
Query: 252 TGKLTAKSDIFSFGVVLLELIT 273
K + SD++SFGVVL EL T
Sbjct: 194 ESKFSVASDVWSFGVVLYELFT 215
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 98.2 bits (243), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 107/221 (48%), Gaps = 18/221 (8%)
Query: 70 ATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVK-----QLDDTGFQGEKEFLVEVLMLS 124
A ++F+ LG+G FG VY + ++ ++A+K QL+ G E + EV + S
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV--EHQLRREVEIQS 64
Query: 125 LMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAAR 184
+RHPN++ L GY + T+ L+ EY PLG++ L L+ D A
Sbjct: 65 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS----KFDEQRTATYITELAN 120
Query: 185 GLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGY 244
L Y H+K VI+RD+K N+LLG K++DFG + P+ + + GT Y
Sbjct: 121 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRD----TLCGTLDY 173
Query: 245 CAPEYATTGKLTAKSDIFSFGVVLLELITGRPAMDDSQGHE 285
PE K D++S GV+ E + G+P + + E
Sbjct: 174 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 214
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 98.2 bits (243), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 108/221 (48%), Gaps = 18/221 (8%)
Query: 70 ATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVK-----QLDDTGFQGEKEFLVEVLMLS 124
A ++F+ LG+G FG VY + ++ ++A+K QL+ G E + EV + S
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV--EHQLRREVEIQS 66
Query: 125 LMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAAR 184
+RHPN++ L GY + T+ L+ EY PLG++ L L+ D A
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS----KFDEQRTATYITELAN 122
Query: 185 GLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGY 244
L Y H+K VI+RD+K N+LLG K+++FG + P+ + T + GT Y
Sbjct: 123 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRR----TTLCGTLDY 175
Query: 245 CAPEYATTGKLTAKSDIFSFGVVLLELITGRPAMDDSQGHE 285
PE K D++S GV+ E + G+P + + E
Sbjct: 176 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 216
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 98.2 bits (243), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 107/221 (48%), Gaps = 18/221 (8%)
Query: 70 ATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVK-----QLDDTGFQGEKEFLVEVLMLS 124
A ++F+ LG+G FG VY + ++ ++A+K QL+ G E + EV + S
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV--EHQLRREVEIQS 66
Query: 125 LMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAAR 184
+RHPN++ L GY + T+ L+ EY PLG++ L L+ D A
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS----KFDEQRTATYITELAN 122
Query: 185 GLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGY 244
L Y H+K VI+RD+K N+LLG K++DFG + P+ + + GT Y
Sbjct: 123 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLC----GTLDY 175
Query: 245 CAPEYATTGKLTAKSDIFSFGVVLLELITGRPAMDDSQGHE 285
PE K D++S GV+ E + G+P + + E
Sbjct: 176 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 216
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 97.8 bits (242), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 107/221 (48%), Gaps = 18/221 (8%)
Query: 70 ATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVK-----QLDDTGFQGEKEFLVEVLMLS 124
A ++F+ LG+G FG VY + ++ ++A+K QL+ G E + EV + S
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV--EHQLRREVEIQS 63
Query: 125 LMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAAR 184
+RHPN++ L GY + T+ L+ EY PLG++ L L+ D A
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS----KFDEQRTATYITELAN 119
Query: 185 GLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGY 244
L Y H+K VI+RD+K N+LLG K++DFG + P+ + + GT Y
Sbjct: 120 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLC----GTLDY 172
Query: 245 CAPEYATTGKLTAKSDIFSFGVVLLELITGRPAMDDSQGHE 285
PE K D++S GV+ E + G+P + + E
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 213
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 97.8 bits (242), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 106/221 (47%), Gaps = 18/221 (8%)
Query: 70 ATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVK-----QLDDTGFQGEKEFLVEVLMLS 124
A ++F+ LG+G FG VY + ++ ++A+K QL+ G E + EV + S
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV--EHQLRREVEIQS 68
Query: 125 LMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAAR 184
+RHPN++ L GY + T+ L+ EY P G + L L+ D A
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLS----KFDEQRTATYITELAN 124
Query: 185 GLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGY 244
L Y H+K VI+RD+K N+LLG K++DFG + P+ + T + GT Y
Sbjct: 125 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDY 177
Query: 245 CAPEYATTGKLTAKSDIFSFGVVLLELITGRPAMDDSQGHE 285
PE K D++S GV+ E + G+P + + E
Sbjct: 178 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 218
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 97.4 bits (241), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 107/221 (48%), Gaps = 18/221 (8%)
Query: 70 ATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVK-----QLDDTGFQGEKEFLVEVLMLS 124
A ++F+ LG+G FG VY + ++ ++A+K QL+ G E + EV + S
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV--EHQLRREVEIQS 66
Query: 125 LMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAAR 184
+RHPN++ L GY + T+ L+ EY PLG++ L L+ D A
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS----KFDEQRTATYITELAN 122
Query: 185 GLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGY 244
L Y H+K VI+RD+K N+LLG K++DFG + P+ + + GT Y
Sbjct: 123 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLC----GTLDY 175
Query: 245 CAPEYATTGKLTAKSDIFSFGVVLLELITGRPAMDDSQGHE 285
PE K D++S GV+ E + G+P + + E
Sbjct: 176 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 216
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 97.4 bits (241), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 75/217 (34%), Positives = 115/217 (52%), Gaps = 17/217 (7%)
Query: 65 RQLVAATDNFKD-TNF--LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLV-EV 120
R +V+ D K T F +GQG G VY TGQ VA++Q+ + Q +KE ++ E+
Sbjct: 10 RSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQM-NLQQQPKKELIINEI 68
Query: 121 LMLSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAA 180
L++ ++PN+V+ + G + +V EY+ GSL D + +D +
Sbjct: 69 LVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC-----MDEGQIAAVCR 123
Query: 181 GAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGL-AKFGPTGDKSHVSTRVM 239
+ LE+LH+ VI+RD+K+ NILLG KL+DFG A+ P ++S ST V
Sbjct: 124 ECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITP--EQSKRSTMV- 177
Query: 240 GTHGYCAPEYATTGKLTAKSDIFSFGVVLLELITGRP 276
GT + APE T K DI+S G++ +E+I G P
Sbjct: 178 GTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEP 214
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 97.4 bits (241), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 72/217 (33%), Positives = 113/217 (52%), Gaps = 17/217 (7%)
Query: 65 RQLVAATDNFKD-TNF--LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLV-EV 120
R +V+ D K T F +GQG G VY TGQ VA++Q+ + Q +KE ++ E+
Sbjct: 10 RSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQM-NLQQQPKKELIINEI 68
Query: 121 LMLSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAA 180
L++ ++PN+V+ + G + +V EY+ GSL D + +D +
Sbjct: 69 LVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC-----MDEGQIAAVCR 123
Query: 181 GAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGL-AKFGPTGDKSHVSTRVM 239
+ LE+LH+ VI+RD+K+ NILLG KL+DFG A+ P K + ++
Sbjct: 124 ECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK---RSEMV 177
Query: 240 GTHGYCAPEYATTGKLTAKSDIFSFGVVLLELITGRP 276
GT + APE T K DI+S G++ +E+I G P
Sbjct: 178 GTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEP 214
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 105/215 (48%), Gaps = 18/215 (8%)
Query: 70 ATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVK-----QLDDTGFQGEKEFLVEVLMLS 124
A ++F+ LG+G FG VY + + ++A+K QL+ G E + EV + S
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGV--EHQLRREVEIQS 63
Query: 125 LMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAAR 184
+RHPN++ L GY + T+ L+ EY PLG++ L L+ D A
Sbjct: 64 HLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLS----KFDEQRTATYITELAN 119
Query: 185 GLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGY 244
L Y H+K VI+RD+K N+LLG K++DFG + P+ ++ + GT Y
Sbjct: 120 ALSYCHSKK---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALC----GTLDY 172
Query: 245 CAPEYATTGKLTAKSDIFSFGVVLLELITGRPAMD 279
PE K D++S GV+ E + G+P +
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/217 (33%), Positives = 113/217 (52%), Gaps = 17/217 (7%)
Query: 65 RQLVAATDNFKD-TNF--LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLV-EV 120
R +V+ D K T F +GQG G VY TGQ VA++Q+ + Q +KE ++ E+
Sbjct: 11 RSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQM-NLQQQPKKELIINEI 69
Query: 121 LMLSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAA 180
L++ ++PN+V+ + G + +V EY+ GSL D + +D +
Sbjct: 70 LVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC-----MDEGQIAAVCR 124
Query: 181 GAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGL-AKFGPTGDKSHVSTRVM 239
+ LE+LH+ VI+RD+K+ NILLG KL+DFG A+ P K + ++
Sbjct: 125 ECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK---RSXMV 178
Query: 240 GTHGYCAPEYATTGKLTAKSDIFSFGVVLLELITGRP 276
GT + APE T K DI+S G++ +E+I G P
Sbjct: 179 GTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEP 215
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/217 (33%), Positives = 113/217 (52%), Gaps = 17/217 (7%)
Query: 65 RQLVAATDNFKD-TNF--LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLV-EV 120
R +V+ D K T F +GQG G VY TGQ VA++Q+ + Q +KE ++ E+
Sbjct: 10 RSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQM-NLQQQPKKELIINEI 68
Query: 121 LMLSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAA 180
L++ ++PN+V+ + G + +V EY+ GSL D + +D +
Sbjct: 69 LVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC-----MDEGQIAAVCR 123
Query: 181 GAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGL-AKFGPTGDKSHVSTRVM 239
+ LE+LH+ VI+RD+K+ NILLG KL+DFG A+ P K + ++
Sbjct: 124 ECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK---RSXMV 177
Query: 240 GTHGYCAPEYATTGKLTAKSDIFSFGVVLLELITGRP 276
GT + APE T K DI+S G++ +E+I G P
Sbjct: 178 GTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEP 214
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/203 (36%), Positives = 107/203 (52%), Gaps = 19/203 (9%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGF--QGEKEFLVEVLMLSLMRHPNLVHLIGY 137
+G G FG VYKGK VAVK L+ T Q + F EV +L RH N++ +GY
Sbjct: 20 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 76
Query: 138 CAEGTQRLLVYEYMPLGSLEDHLLGLTP--EMKPLDWNTRMKIAAGAARGLEYLHNKADP 195
+ Q +V ++ SL HL EMK L + IA ARG++YLH K+
Sbjct: 77 STK-PQLAIVTQWCEGSSLYHHLHASETKFEMKKL-----IDIARQTARGMDYLHAKS-- 128
Query: 196 PVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYAT---T 252
+I+RDLK+ NI L + K+ DFGLA SH ++ G+ + APE +
Sbjct: 129 -IIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDS 187
Query: 253 GKLTAKSDIFSFGVVLLELITGR 275
+ +SD+++FG+VL EL+TG+
Sbjct: 188 NPYSFQSDVYAFGIVLYELMTGQ 210
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 100/214 (46%), Gaps = 13/214 (6%)
Query: 66 QLVAATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEF---LVEVLM 122
Q+ ++F+ LG+G FG V+ + +T Q A+K L + + +VE +
Sbjct: 12 QIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 71
Query: 123 LSL-MRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAG 181
LSL HP L H+ V EY+ G L H+ D + AA
Sbjct: 72 LSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSC----HKFDLSRATFYAAE 127
Query: 182 AARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGT 241
GL++LH+K ++YRDLK NILL K H K++DFG+ K GD + GT
Sbjct: 128 IILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK--TNEFCGT 182
Query: 242 HGYCAPEYATTGKLTAKSDIFSFGVVLLELITGR 275
Y APE K D +SFGV+L E++ G+
Sbjct: 183 PDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ 216
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 105/221 (47%), Gaps = 18/221 (8%)
Query: 70 ATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVK-----QLDDTGFQGEKEFLVEVLMLS 124
A ++F+ LG+G FG VY + ++ ++A+K QL+ G E + EV + S
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV--EHQLRREVEIQS 68
Query: 125 LMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAAR 184
+RHPN++ L GY + T+ L+ EY P G + L L+ D A
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLS----KFDEQRTATYITELAN 124
Query: 185 GLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGY 244
L Y H+K VI+RD+K N+LLG K++DFG + P+ + + GT Y
Sbjct: 125 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----XXLXGTLDY 177
Query: 245 CAPEYATTGKLTAKSDIFSFGVVLLELITGRPAMDDSQGHE 285
PE K D++S GV+ E + G+P + + E
Sbjct: 178 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 218
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 111/212 (52%), Gaps = 31/212 (14%)
Query: 79 FLGQGGFGAVYKGKLAETGQVVAVKQL----DDTGFQGEKEFLVEVLMLSLMRHPNLVHL 134
+G GGFG VY+ G VAVK D+ Q + E + ++++HPN++ L
Sbjct: 14 IIGIGGFGKVYRAFW--IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIAL 71
Query: 135 IGYCAEGTQRLLVYEYMPLGSLEDHLLG--LTPEMKPLDWNTRMKIAAGAARGLEYLHNK 192
G C + LV E+ G L L G + P++ ++W ++ ARG+ YLH++
Sbjct: 72 RGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDIL-VNWAVQI------ARGMNYLHDE 124
Query: 193 ADPPVIYRDLKAGNILLGKGFHP--------KLSDFGLAKFGPTGDKSHVSTRV--MGTH 242
A P+I+RDLK+ NIL+ + K++DFGLA+ + H +T++ G +
Sbjct: 125 AIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR------EWHRTTKMSAAGAY 178
Query: 243 GYCAPEYATTGKLTAKSDIFSFGVVLLELITG 274
+ APE + SD++S+GV+L EL+TG
Sbjct: 179 AWMAPEVIRASMFSKGSDVWSYGVLLWELLTG 210
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 111/232 (47%), Gaps = 32/232 (13%)
Query: 70 ATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLV----------E 119
+ +F+ LG G FG V+ + G+ A+K L +KE +V E
Sbjct: 4 SLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVL-------KKEIVVRLKQVEHTNDE 56
Query: 120 VLMLSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIA 179
LMLS++ HP ++ + G + Q ++ +Y+ G L L + + A
Sbjct: 57 RLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGEL----FSLLRKSQRFPNPVAKFYA 112
Query: 180 AGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVM 239
A LEYLH+K +IYRDLK NILL K H K++DFG AK+ P V+ +
Sbjct: 113 AEVCLALEYLHSKD---IIYRDLKPENILLDKNGHIKITDFGFAKYVPD-----VTYXLC 164
Query: 240 GTHGYCAPEYATTGKLTAKSDIFSFGVVLLELITGRPAMDDS---QGHERML 288
GT Y APE +T D +SFG+++ E++ G DS + +E++L
Sbjct: 165 GTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKIL 216
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/215 (33%), Positives = 113/215 (52%), Gaps = 22/215 (10%)
Query: 73 NFKDTNFLGQGGFGAVYKGKLAETGQVV----AVKQLDDT-GFQGEKEFLVEVLMLSLMR 127
K LG G FG VYKG G+ V A+K L++T G + EF+ E L+++ M
Sbjct: 16 ELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMD 75
Query: 128 HPNLVHLIGYCAEGTQRLLVYEYMPLGSL----EDHLLGLTPEMKPLDWNTRMKIAAGAA 183
HP+LV L+G C T + LV + MP G L +H + ++ L+W ++ A
Sbjct: 76 HPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQLL-LNWCVQI------A 127
Query: 184 RGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHG 243
+G+ YL + +++RDL A N+L+ H K++DFGLA+ +K + +
Sbjct: 128 KGMMYLEERR---LVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIK 184
Query: 244 YCAPEYATTGKLTAKSDIFSFGVVLLELIT--GRP 276
+ A E K T +SD++S+GV + EL+T G+P
Sbjct: 185 WMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKP 219
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/215 (33%), Positives = 113/215 (52%), Gaps = 22/215 (10%)
Query: 73 NFKDTNFLGQGGFGAVYKGKLAETGQVV----AVKQLDDT-GFQGEKEFLVEVLMLSLMR 127
K LG G FG VYKG G+ V A+K L++T G + EF+ E L+++ M
Sbjct: 39 ELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMD 98
Query: 128 HPNLVHLIGYCAEGTQRLLVYEYMPLGSL----EDHLLGLTPEMKPLDWNTRMKIAAGAA 183
HP+LV L+G C T + LV + MP G L +H + ++ L+W ++ A
Sbjct: 99 HPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQLL-LNWCVQI------A 150
Query: 184 RGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHG 243
+G+ YL + +++RDL A N+L+ H K++DFGLA+ +K + +
Sbjct: 151 KGMMYLEERR---LVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIK 207
Query: 244 YCAPEYATTGKLTAKSDIFSFGVVLLELIT--GRP 276
+ A E K T +SD++S+GV + EL+T G+P
Sbjct: 208 WMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKP 242
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/198 (34%), Positives = 103/198 (52%), Gaps = 19/198 (9%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEK-EFLVEVLMLSLMRHPNLVHLIGYC 138
+G+G FG V+ G+L +VAVK +T K +FL E +L HPN+V LIG C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 139 AEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVI 198
TQ+ +Y M L D L L E L T +++ AA G+EYL +K I
Sbjct: 182 ---TQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC---CI 235
Query: 199 YRDLKAGNILLGKGFHPKLSDFGLAK------FGPTGDKSHVSTRVMGTHGYCAPEYATT 252
+RDL A N L+ + K+SDFG+++ + +G V + + APE
Sbjct: 236 HRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVK------WTAPEALNY 289
Query: 253 GKLTAKSDIFSFGVVLLE 270
G+ +++SD++SFG++L E
Sbjct: 290 GRYSSESDVWSFGILLWE 307
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/208 (35%), Positives = 107/208 (51%), Gaps = 19/208 (9%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLVHLIGYCA 139
+G+G FG V K K + VA+KQ++ + K F+VE+ LS + HPN+V L G C
Sbjct: 17 VGRGAFGVVCKAKW--RAKDVAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGACL 72
Query: 140 EGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTR---MKIAAGAARGLEYLHNKADPP 196
LV EY GSL + L G +PL + T M ++G+ YLH+
Sbjct: 73 NPV--CLVMEYAEGGSLYNVLHG----AEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKA 126
Query: 197 VIYRDLKAGNILL-GKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTGKL 255
+I+RDLK N+LL G K+ DFG A ++H+ T G+ + APE
Sbjct: 127 LIHRDLKPPNLLLVAGGTVLKICDFGTA----CDIQTHM-TNNKGSAAWMAPEVFEGSNY 181
Query: 256 TAKSDIFSFGVVLLELITGRPAMDDSQG 283
+ K D+FS+G++L E+IT R D+ G
Sbjct: 182 SEKCDVFSWGIILWEVITRRKPFDEIGG 209
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/208 (35%), Positives = 107/208 (51%), Gaps = 19/208 (9%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLVHLIGYCA 139
+G+G FG V K K + VA+KQ++ + K F+VE+ LS + HPN+V L G C
Sbjct: 16 VGRGAFGVVCKAKW--RAKDVAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGACL 71
Query: 140 EGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTR---MKIAAGAARGLEYLHNKADPP 196
LV EY GSL + L G +PL + T M ++G+ YLH+
Sbjct: 72 NPV--CLVMEYAEGGSLYNVLHG----AEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKA 125
Query: 197 VIYRDLKAGNILL-GKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTGKL 255
+I+RDLK N+LL G K+ DFG A ++H+ T G+ + APE
Sbjct: 126 LIHRDLKPPNLLLVAGGTVLKICDFGTA----CDIQTHM-TNNKGSAAWMAPEVFEGSNY 180
Query: 256 TAKSDIFSFGVVLLELITGRPAMDDSQG 283
+ K D+FS+G++L E+IT R D+ G
Sbjct: 181 SEKCDVFSWGIILWEVITRRKPFDEIGG 208
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/192 (34%), Positives = 100/192 (52%), Gaps = 7/192 (3%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEK-EFLVEVLMLSLMRHPNLVHLIGYC 138
+G+G FG V+ G+L +VAVK +T K +FL E +L HPN+V LIG C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 139 AEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVI 198
TQ+ +Y M L D L L E L T +++ AA G+EYL +K I
Sbjct: 182 ---TQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC---CI 235
Query: 199 YRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTGKLTAK 258
+RDL A N L+ + K+SDFG+++ G + + APE G+ +++
Sbjct: 236 HRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYGRYSSE 295
Query: 259 SDIFSFGVVLLE 270
SD++SFG++L E
Sbjct: 296 SDVWSFGILLWE 307
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 99/203 (48%), Gaps = 14/203 (6%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQG---EKEFLVEVLMLSLMRHPNLVHLIG 136
LG+G FG VY + ++ ++A+K L T + E + EV + S +RHPN++ L G
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 137 YCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPP 196
Y + T+ L+ EY PLG++ L L+ D A L Y H+K
Sbjct: 80 YFHDATRVYLILEYAPLGTVYRELQKLS----RFDEQRTATYITELANALSYCHSKR--- 132
Query: 197 VIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTGKLT 256
VI+RD+K N+LLG K++DFG + P+ + T + GT Y PE
Sbjct: 133 VIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEMIEGRMHD 188
Query: 257 AKSDIFSFGVVLLELITGRPAMD 279
K D++S GV+ E + G P +
Sbjct: 189 EKVDLWSLGVLCYEFLVGMPPFE 211
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/199 (34%), Positives = 107/199 (53%), Gaps = 14/199 (7%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLV-EVLMLSLMRHPNLVHLIGYC 138
+GQG G VY TGQ VA++Q+ + Q +KE ++ E+L++ ++PN+V+ +
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQM-NLQQQPKKELIINEILVMRENKNPNIVNYLDSY 87
Query: 139 AEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVI 198
G + +V EY+ GSL D + +D + + LE+LH+ VI
Sbjct: 88 LVGDELWVVMEYLAGGSLTDVVTETC-----MDEGQIAAVCRECLQALEFLHSNQ---VI 139
Query: 199 YRDLKAGNILLGKGFHPKLSDFGL-AKFGPTGDKSHVSTRVMGTHGYCAPEYATTGKLTA 257
+R++K+ NILLG KL+DFG A+ P ++S ST V GT + APE T
Sbjct: 140 HRNIKSDNILLGMDGSVKLTDFGFCAQITP--EQSKRSTMV-GTPYWMAPEVVTRKAYGP 196
Query: 258 KSDIFSFGVVLLELITGRP 276
K DI+S G++ +E+I G P
Sbjct: 197 KVDIWSLGIMAIEMIEGEP 215
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/209 (35%), Positives = 108/209 (51%), Gaps = 15/209 (7%)
Query: 73 NFKDTNFLGQGGFGAV----YKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRH 128
+ K + LG+G FG+V Y TG +VAVKQL +G +++F E+ +L +
Sbjct: 11 HLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHS 70
Query: 129 PNLVHLIGYC-AEGTQRL-LVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGL 186
+V G G Q L LV EY+P G L D L LD + + ++ +G+
Sbjct: 71 DFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFL---QRHRARLDASRLLLYSSQICKGM 127
Query: 187 EYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHG--Y 244
EYL ++ ++RDL A NIL+ H K++DFGLAK P DK + R G +
Sbjct: 128 EYLGSRR---CVHRDLAARNILVESEAHVKIADFGLAKLLPL-DKDYYVVREPGQSPIFW 183
Query: 245 CAPEYATTGKLTAKSDIFSFGVVLLELIT 273
APE + + +SD++SFGVVL EL T
Sbjct: 184 YAPESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/203 (36%), Positives = 107/203 (52%), Gaps = 19/203 (9%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGF--QGEKEFLVEVLMLSLMRHPNLVHLIGY 137
+G G FG VYKGK VAVK L+ T Q + F EV +L RH N++ +GY
Sbjct: 32 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 88
Query: 138 CAEGTQRLLVYEYMPLGSLEDHLLGLTP--EMKPLDWNTRMKIAAGAARGLEYLHNKADP 195
+ Q +V ++ SL HL EMK L + IA ARG++YLH K+
Sbjct: 89 STK-PQLAIVTQWCEGSSLYHHLHASETKFEMKKL-----IDIARQTARGMDYLHAKS-- 140
Query: 196 PVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEY---ATT 252
+I+RDLK+ NI L + K+ DFGLA SH ++ G+ + APE +
Sbjct: 141 -IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDS 199
Query: 253 GKLTAKSDIFSFGVVLLELITGR 275
+ +SD+++FG+VL EL+TG+
Sbjct: 200 NPYSFQSDVYAFGIVLYELMTGQ 222
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 78/223 (34%), Positives = 112/223 (50%), Gaps = 22/223 (9%)
Query: 66 QLVAATD-------NFKDTNFLGQGGFGAV----YKGKLAETGQVVAVKQLDDTGFQGEK 114
QL A D + K + LG+G FG+V Y TG +VAVKQL +G ++
Sbjct: 10 QLYACQDPTIFEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQR 69
Query: 115 EFLVEVLMLSLMRHPNLVHLIGYC-AEGTQRL-LVYEYMPLGSLEDHLLGLTPEMKPLDW 172
+F E+ +L + +V G G Q L LV EY+P G L D L LD
Sbjct: 70 DFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFL---QRHRARLDA 126
Query: 173 NTRMKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKS 232
+ + ++ +G+EYL ++ ++RDL A NIL+ H K++DFGLAK P DK
Sbjct: 127 SRLLLYSSQICKGMEYLGSRR---CVHRDLAARNILVESEAHVKIADFGLAKLLPL-DKD 182
Query: 233 HVSTRVMGTHG--YCAPEYATTGKLTAKSDIFSFGVVLLELIT 273
+ R G + APE + + +SD++SFGVVL EL T
Sbjct: 183 YYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 74/203 (36%), Positives = 107/203 (52%), Gaps = 19/203 (9%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGF--QGEKEFLVEVLMLSLMRHPNLVHLIGY 137
+G G FG VYKGK VAVK L+ T Q + F EV +L RH N++ +GY
Sbjct: 32 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 88
Query: 138 CAEGTQRLLVYEYMPLGSLEDHLLGLTP--EMKPLDWNTRMKIAAGAARGLEYLHNKADP 195
+ Q +V ++ SL HL EMK L + IA ARG++YLH K+
Sbjct: 89 -STAPQLAIVTQWCEGSSLYHHLHASETKFEMKKL-----IDIARQTARGMDYLHAKS-- 140
Query: 196 PVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEY---ATT 252
+I+RDLK+ NI L + K+ DFGLA SH ++ G+ + APE +
Sbjct: 141 -IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDS 199
Query: 253 GKLTAKSDIFSFGVVLLELITGR 275
+ +SD+++FG+VL EL+TG+
Sbjct: 200 NPYSFQSDVYAFGIVLYELMTGQ 222
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 94.7 bits (234), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 71/211 (33%), Positives = 100/211 (47%), Gaps = 19/211 (9%)
Query: 74 FKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGE---KEFLVEVLMLSLMRHPN 130
F D +G G FGAVY + +VVA+K++ +G Q ++ + EV L +RHPN
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 131 LVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLH 190
+ G LV EY LGS D L KPL + GA +GL YLH
Sbjct: 77 TIQYRGCYLREHTAWLVMEYC-LGSASD---LLEVHKKPLQEVEIAAVTHGALQGLAYLH 132
Query: 191 NKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYA 250
+ +I+RD+KAGNILL + KL DFG A + +GT + APE
Sbjct: 133 SHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANX------FVGTPYWMAPEVI 183
Query: 251 TT---GKLTAKSDIFSFGVVLLELITGRPAM 278
G+ K D++S G+ +EL +P +
Sbjct: 184 LAMDEGQYDGKVDVWSLGITCIELAERKPPL 214
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 94.7 bits (234), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 74/209 (35%), Positives = 108/209 (51%), Gaps = 15/209 (7%)
Query: 73 NFKDTNFLGQGGFGAV----YKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRH 128
+ K + LG+G FG+V Y TG +VAVKQL +G +++F E+ +L +
Sbjct: 12 HLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHS 71
Query: 129 PNLVHLIGYC-AEGTQRL-LVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGL 186
+V G G Q L LV EY+P G L D L LD + + ++ +G+
Sbjct: 72 DFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFL---QRHRARLDASRLLLYSSQICKGM 128
Query: 187 EYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHG--Y 244
EYL ++ ++RDL A NIL+ H K++DFGLAK P DK + R G +
Sbjct: 129 EYLGSRR---CVHRDLAARNILVESEAHVKIADFGLAKLLPL-DKDYYVVREPGQSPIFW 184
Query: 245 CAPEYATTGKLTAKSDIFSFGVVLLELIT 273
APE + + +SD++SFGVVL EL T
Sbjct: 185 YAPESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 94.4 bits (233), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 71/211 (33%), Positives = 100/211 (47%), Gaps = 19/211 (9%)
Query: 74 FKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGE---KEFLVEVLMLSLMRHPN 130
F D +G G FGAVY + +VVA+K++ +G Q ++ + EV L +RHPN
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 131 LVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLH 190
+ G LV EY LGS D L KPL + GA +GL YLH
Sbjct: 116 TIQYRGCYLREHTAWLVMEYC-LGSASDL---LEVHKKPLQEVEIAAVTHGALQGLAYLH 171
Query: 191 NKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYA 250
+ +I+RD+KAGNILL + KL DFG A + +GT + APE
Sbjct: 172 SHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANX------FVGTPYWMAPEVI 222
Query: 251 TT---GKLTAKSDIFSFGVVLLELITGRPAM 278
G+ K D++S G+ +EL +P +
Sbjct: 223 LAMDEGQYDGKVDVWSLGITCIELAERKPPL 253
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 94.4 bits (233), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 99/214 (46%), Gaps = 13/214 (6%)
Query: 66 QLVAATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEF---LVEVLM 122
Q+ ++F LG+G FG V+ + +T Q A+K L + + +VE +
Sbjct: 11 QIKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 70
Query: 123 LSL-MRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAG 181
LSL HP L H+ V EY+ G L H+ D + AA
Sbjct: 71 LSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHI----QSCHKFDLSRATFYAAE 126
Query: 182 AARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGT 241
GL++LH+K ++YRDLK NILL K H K++DFG+ K GD + GT
Sbjct: 127 IILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK--TNXFCGT 181
Query: 242 HGYCAPEYATTGKLTAKSDIFSFGVVLLELITGR 275
Y APE K D +SFGV+L E++ G+
Sbjct: 182 PDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ 215
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 102/195 (52%), Gaps = 11/195 (5%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLVHLIGYCA 139
LGQG FG V+ G T +V A+K L G + FL E ++ +RH LV L +
Sbjct: 192 LGQGCFGEVWMGTWNGTTRV-AIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 140 EGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIY 199
E +V EYM GSL D L G T K L + +AA A G+ Y+ ++
Sbjct: 250 E-EPIYIVTEYMSKGSLLDFLKGETG--KYLRLPQLVDMAAQIASGMAYVERMN---YVH 303
Query: 200 RDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTR-VMGTHGYCAPEYATTGKLTAK 258
RDL+A NIL+G+ K++DFGLA+ D + + + + APE A G+ T K
Sbjct: 304 RDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 361
Query: 259 SDIFSFGVVLLELIT 273
SD++SFG++L EL T
Sbjct: 362 SDVWSFGILLTELTT 376
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 98/203 (48%), Gaps = 14/203 (6%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQG---EKEFLVEVLMLSLMRHPNLVHLIG 136
LG+G FG VY + ++ ++A+K L T + E + EV + S +RHPN++ L G
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 137 YCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPP 196
Y + T+ L+ EY PLG++ L L+ D A L Y H+K
Sbjct: 80 YFHDATRVYLILEYAPLGTVYRELQKLS----RFDEQRTATYITELANALSYCHSKR--- 132
Query: 197 VIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTGKLT 256
VI+RD+K N+LLG K++DFG + P+ + + GT Y PE
Sbjct: 133 VIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRD----TLCGTLDYLPPEMIEGRMHD 188
Query: 257 AKSDIFSFGVVLLELITGRPAMD 279
K D++S GV+ E + G P +
Sbjct: 189 EKVDLWSLGVLCYEFLVGMPPFE 211
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 99/211 (46%), Gaps = 11/211 (5%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGE---KEFLVEVLMLSLMRH 128
++FK N LG+G F VY+ + TG VA+K +D + EV + ++H
Sbjct: 11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKH 70
Query: 129 PNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEY 188
P+++ L Y + LV E G + + L +KP N G+ Y
Sbjct: 71 PSILELYNYFEDSNYVYLVLEMCHNGEMNRY---LKNRVKPFSENEARHFMHQIITGMLY 127
Query: 189 LHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPE 248
LH+ +++RDL N+LL + + K++DFGLA + H + + GT Y +PE
Sbjct: 128 LHSHG---ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT--LCGTPNYISPE 182
Query: 249 YATTGKLTAKSDIFSFGVVLLELITGRPAMD 279
AT +SD++S G + L+ GRP D
Sbjct: 183 IATRSAHGLESDVWSLGCMFYTLLIGRPPFD 213
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 102/195 (52%), Gaps = 11/195 (5%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLVHLIGYCA 139
LGQG FG V+ G T +V A+K L G + FL E ++ +RH LV L +
Sbjct: 192 LGQGCFGEVWMGTWNGTTRV-AIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 140 EGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIY 199
E +V EYM GSL D L G T K L + +AA A G+ Y+ ++
Sbjct: 250 E-EPIYIVTEYMSKGSLLDFLKGETG--KYLRLPQLVDMAAQIASGMAYVERMN---YVH 303
Query: 200 RDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTR-VMGTHGYCAPEYATTGKLTAK 258
RDL+A NIL+G+ K++DFGLA+ D + + + + APE A G+ T K
Sbjct: 304 RDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 361
Query: 259 SDIFSFGVVLLELIT 273
SD++SFG++L EL T
Sbjct: 362 SDVWSFGILLTELTT 376
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 102/195 (52%), Gaps = 11/195 (5%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLVHLIGYCA 139
LGQG FG V+ G T +V A+K L G + FL E ++ +RH LV L +
Sbjct: 275 LGQGCFGEVWMGTWNGTTRV-AIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 332
Query: 140 EGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIY 199
E +V EYM GSL D L G T K L + +AA A G+ Y+ ++
Sbjct: 333 E-EPIYIVTEYMSKGSLLDFLKGET--GKYLRLPQLVDMAAQIASGMAYVERMN---YVH 386
Query: 200 RDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTR-VMGTHGYCAPEYATTGKLTAK 258
RDL+A NIL+G+ K++DFGLA+ D + + + + APE A G+ T K
Sbjct: 387 RDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 444
Query: 259 SDIFSFGVVLLELIT 273
SD++SFG++L EL T
Sbjct: 445 SDVWSFGILLTELTT 459
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/232 (34%), Positives = 117/232 (50%), Gaps = 22/232 (9%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGF---QGEKEFLVEVLMLSLMRH 128
++F +G+GGFG VY + A+TG++ A+K LD QGE L E +MLSL+
Sbjct: 188 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 247
Query: 129 PN--LVHLIGYCAEGTQRL-LVYEYMPLGSLEDHLL--GLTPEMKPLDWNTRMKIAAGAA 183
+ + + Y +L + + M G L HL G+ E + R AA
Sbjct: 248 GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEA-----DMRF-YAAEII 301
Query: 184 RGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHG 243
GLE++HN+ V+YRDLK NILL + H ++SD GLA + K H S +GTHG
Sbjct: 302 LGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA-CDFSKKKPHAS---VGTHG 354
Query: 244 YCAPEYATTG-KLTAKSDIFSFGVVLLELITGRPAMDDSQGHERMLVDWVTL 294
Y APE G + +D FS G +L +L+ G + ++ +D +TL
Sbjct: 355 YMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTL 406
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/232 (34%), Positives = 117/232 (50%), Gaps = 22/232 (9%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGF---QGEKEFLVEVLMLSLMRH 128
++F +G+GGFG VY + A+TG++ A+K LD QGE L E +MLSL+
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 248
Query: 129 PN--LVHLIGYCAEGTQRL-LVYEYMPLGSLEDHLL--GLTPEMKPLDWNTRMKIAAGAA 183
+ + + Y +L + + M G L HL G+ E + R AA
Sbjct: 249 GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEA-----DMRF-YAAEII 302
Query: 184 RGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHG 243
GLE++HN+ V+YRDLK NILL + H ++SD GLA + K H S +GTHG
Sbjct: 303 LGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA-CDFSKKKPHAS---VGTHG 355
Query: 244 YCAPEYATTG-KLTAKSDIFSFGVVLLELITGRPAMDDSQGHERMLVDWVTL 294
Y APE G + +D FS G +L +L+ G + ++ +D +TL
Sbjct: 356 YMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTL 407
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/194 (36%), Positives = 100/194 (51%), Gaps = 9/194 (4%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLVHLIGYCA 139
LGQG FG V+ G T +V A+K L G + FL E ++ +RH LV L +
Sbjct: 16 LGQGCFGEVWMGTWNGTTRV-AIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 73
Query: 140 EGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIY 199
E +V EYM GSL D L G T K L + +AA A G+ Y+ ++
Sbjct: 74 E-EPIXIVTEYMSKGSLLDFLKGETG--KYLRLPQLVDMAAQIASGMAYVERMN---YVH 127
Query: 200 RDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTGKLTAKS 259
RDL+A NIL+G+ K++DFGLA+ + + + APE A G+ T KS
Sbjct: 128 RDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIK-WTAPEAALYGRFTIKS 186
Query: 260 DIFSFGVVLLELIT 273
D++SFG++L EL T
Sbjct: 187 DVWSFGILLTELTT 200
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 102/195 (52%), Gaps = 11/195 (5%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLVHLIGYCA 139
LGQG FG V+ G T +V A+K L G + FL E ++ +RH LV L +
Sbjct: 19 LGQGCFGEVWMGTWNGTTRV-AIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 76
Query: 140 EGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIY 199
E +V EYM GSL D L G T K L + +AA A G+ Y+ ++
Sbjct: 77 E-EPIYIVTEYMSKGSLLDFLKGETG--KYLRLPQLVDMAAQIASGMAYVERMN---YVH 130
Query: 200 RDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTR-VMGTHGYCAPEYATTGKLTAK 258
RDL+A NIL+G+ K++DFGLA+ D + + + + APE A G+ T K
Sbjct: 131 RDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 188
Query: 259 SDIFSFGVVLLELIT 273
SD++SFG++L EL T
Sbjct: 189 SDVWSFGILLTELTT 203
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/232 (34%), Positives = 117/232 (50%), Gaps = 22/232 (9%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGF---QGEKEFLVEVLMLSLMRH 128
++F +G+GGFG VY + A+TG++ A+K LD QGE L E +MLSL+
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 248
Query: 129 PN--LVHLIGYCAEGTQRL-LVYEYMPLGSLEDHLL--GLTPEMKPLDWNTRMKIAAGAA 183
+ + + Y +L + + M G L HL G+ E + R AA
Sbjct: 249 GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEA-----DMRF-YAAEII 302
Query: 184 RGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHG 243
GLE++HN+ V+YRDLK NILL + H ++SD GLA + K H S +GTHG
Sbjct: 303 LGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA-CDFSKKKPHAS---VGTHG 355
Query: 244 YCAPEYATTG-KLTAKSDIFSFGVVLLELITGRPAMDDSQGHERMLVDWVTL 294
Y APE G + +D FS G +L +L+ G + ++ +D +TL
Sbjct: 356 YMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTL 407
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/232 (34%), Positives = 117/232 (50%), Gaps = 22/232 (9%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGF---QGEKEFLVEVLMLSLMRH 128
++F +G+GGFG VY + A+TG++ A+K LD QGE L E +MLSL+
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 248
Query: 129 PN--LVHLIGYCAEGTQRL-LVYEYMPLGSLEDHLL--GLTPEMKPLDWNTRMKIAAGAA 183
+ + + Y +L + + M G L HL G+ E + R AA
Sbjct: 249 GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEA-----DMRF-YAAEII 302
Query: 184 RGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHG 243
GLE++HN+ V+YRDLK NILL + H ++SD GLA + K H S +GTHG
Sbjct: 303 LGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA-CDFSKKKPHAS---VGTHG 355
Query: 244 YCAPEYATTG-KLTAKSDIFSFGVVLLELITGRPAMDDSQGHERMLVDWVTL 294
Y APE G + +D FS G +L +L+ G + ++ +D +TL
Sbjct: 356 YMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTL 407
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 106/201 (52%), Gaps = 15/201 (7%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGF--QGEKEFLVEVLMLSLMRHPNLVHLIGY 137
+G G FG VYKGK VAVK L+ T Q + F EV +L RH N++ +GY
Sbjct: 43 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 99
Query: 138 CAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPV 197
+ Q +V ++ SL HL + + + + + IA A+G++YLH K+ +
Sbjct: 100 STK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKL---IDIARQTAQGMDYLHAKS---I 152
Query: 198 IYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATT---GK 254
I+RDLK+ NI L + K+ DFGLA SH ++ G+ + APE
Sbjct: 153 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 212
Query: 255 LTAKSDIFSFGVVLLELITGR 275
+ +SD+++FG+VL EL+TG+
Sbjct: 213 YSFQSDVYAFGIVLYELMTGQ 233
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 102/195 (52%), Gaps = 11/195 (5%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLVHLIGYCA 139
LGQG FG V+ G T +V A+K L G + FL E ++ +RH LV L +
Sbjct: 192 LGQGCFGEVWMGTWNGTTRV-AIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 140 EGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIY 199
E +V EYM GSL D L G T K L + +AA A G+ Y+ ++
Sbjct: 250 E-EPIYIVGEYMSKGSLLDFLKGETG--KYLRLPQLVDMAAQIASGMAYVERMN---YVH 303
Query: 200 RDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTR-VMGTHGYCAPEYATTGKLTAK 258
RDL+A NIL+G+ K++DFGLA+ D + + + + APE A G+ T K
Sbjct: 304 RDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 361
Query: 259 SDIFSFGVVLLELIT 273
SD++SFG++L EL T
Sbjct: 362 SDVWSFGILLTELTT 376
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 105/212 (49%), Gaps = 19/212 (8%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLVHLIGYCA 139
LG+G FG K ETG+V+ +K+L + ++ FL EV ++ + HPN++ IG
Sbjct: 18 LGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLY 77
Query: 140 EGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIY 199
+ + + EY+ G+L + + + W+ R+ A A G+ YLH+ +I+
Sbjct: 78 KDKRLNFITEYIKGGTLRGIIKSMDSQYP---WSQRVSFAKDIASGMAYLHSMN---IIH 131
Query: 200 RDLKAGNILLGKGFHPKLSDFGLAKF------GPTGDKS------HVSTRVMGTHGYCAP 247
RDL + N L+ + + ++DFGLA+ P G +S V+G + AP
Sbjct: 132 RDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAP 191
Query: 248 EYATTGKLTAKSDIFSFGVVLLELITGRPAMD 279
E K D+FSFG+VL E+I GR D
Sbjct: 192 EMINGRSYDEKVDVFSFGIVLCEII-GRVNAD 222
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/196 (37%), Positives = 103/196 (52%), Gaps = 13/196 (6%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLVHLIGYCA 139
LGQG FG V+ G T +V A+K L G + FL E ++ +RH LV L +
Sbjct: 17 LGQGCFGEVWMGTWNGTTRV-AIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 74
Query: 140 EGTQRLLVYEYMPLGSLEDHLLGLTPEM-KPLDWNTRMKIAAGAARGLEYLHNKADPPVI 198
E +V EYM GSL D L G EM K L + +AA A G+ Y+ +
Sbjct: 75 E-EPIYIVTEYMSKGSLLDFLKG---EMGKYLRLPQLVDMAAQIASGMAYVERMN---YV 127
Query: 199 YRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTR-VMGTHGYCAPEYATTGKLTA 257
+RDL+A NIL+G+ K++DFGLA+ D + + + + APE A G+ T
Sbjct: 128 HRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAALYGRFTI 185
Query: 258 KSDIFSFGVVLLELIT 273
KSD++SFG++L EL T
Sbjct: 186 KSDVWSFGILLTELTT 201
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 106/201 (52%), Gaps = 15/201 (7%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGF--QGEKEFLVEVLMLSLMRHPNLVHLIGY 137
+G G FG VYKGK VAVK L+ T Q + F EV +L RH N++ +GY
Sbjct: 44 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 100
Query: 138 CAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPV 197
+ Q +V ++ SL HL + + + + + IA A+G++YLH K+ +
Sbjct: 101 STK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKL---IDIARQTAQGMDYLHAKS---I 153
Query: 198 IYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATT---GK 254
I+RDLK+ NI L + K+ DFGLA SH ++ G+ + APE
Sbjct: 154 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 213
Query: 255 LTAKSDIFSFGVVLLELITGR 275
+ +SD+++FG+VL EL+TG+
Sbjct: 214 YSFQSDVYAFGIVLYELMTGQ 234
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/196 (37%), Positives = 103/196 (52%), Gaps = 13/196 (6%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLVHLIGYCA 139
LGQG FG V+ G T +V A+K L G + FL E ++ +RH LV L +
Sbjct: 15 LGQGCFGEVWMGTWNGTTRV-AIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 72
Query: 140 EGTQRLLVYEYMPLGSLEDHLLGLTPEM-KPLDWNTRMKIAAGAARGLEYLHNKADPPVI 198
E +V EYM GSL D L G EM K L + +AA A G+ Y+ +
Sbjct: 73 E-EPIYIVTEYMSKGSLLDFLKG---EMGKYLRLPQLVDMAAQIASGMAYVERMN---YV 125
Query: 199 YRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTR-VMGTHGYCAPEYATTGKLTA 257
+RDL+A NIL+G+ K++DFGLA+ D + + + + APE A G+ T
Sbjct: 126 HRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAALYGRFTI 183
Query: 258 KSDIFSFGVVLLELIT 273
KSD++SFG++L EL T
Sbjct: 184 KSDVWSFGILLTELTT 199
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/196 (36%), Positives = 104/196 (53%), Gaps = 13/196 (6%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLVHLIGYCA 139
LGQG FG V+ G T +V A+K L G + FL E ++ +RH LV L +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRV-AIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 140 EGTQRLLVYEYMPLGSLEDHLLGLTPEM-KPLDWNTRMKIAAGAARGLEYLHNKADPPVI 198
E +++ EYM GSL D L G EM K L + +AA A G+ Y+ +
Sbjct: 84 EEPIYIVI-EYMSKGSLLDFLKG---EMGKYLRLPQLVDMAAQIASGMAYVERMN---YV 136
Query: 199 YRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTR-VMGTHGYCAPEYATTGKLTA 257
+RDL+A NIL+G+ K++DFGLA+ D + + + + APE A G+ T
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAALYGRFTI 194
Query: 258 KSDIFSFGVVLLELIT 273
KSD++SFG++L EL T
Sbjct: 195 KSDVWSFGILLTELTT 210
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 106/201 (52%), Gaps = 15/201 (7%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGF--QGEKEFLVEVLMLSLMRHPNLVHLIGY 137
+G G FG VYKGK VAVK L+ T Q + F EV +L RH N++ +GY
Sbjct: 18 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 74
Query: 138 CAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPV 197
+ Q +V ++ SL HL + + + + + IA A+G++YLH K+ +
Sbjct: 75 STK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIK---LIDIARQTAQGMDYLHAKS---I 127
Query: 198 IYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATT---GK 254
I+RDLK+ NI L + K+ DFGLA SH ++ G+ + APE
Sbjct: 128 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 187
Query: 255 LTAKSDIFSFGVVLLELITGR 275
+ +SD+++FG+VL EL+TG+
Sbjct: 188 YSFQSDVYAFGIVLYELMTGQ 208
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 106/209 (50%), Gaps = 15/209 (7%)
Query: 73 NFKDTNFLGQGGFGAV----YKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRH 128
+ K + LG+G FG+V Y TG +VAVKQL +G +++F E+ +L +
Sbjct: 8 HLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHS 67
Query: 129 PNLVHL--IGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGL 186
+V + Y + LV EY+P G L D L LD + + ++ +G+
Sbjct: 68 DFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFL---QRHRARLDASRLLLYSSQICKGM 124
Query: 187 EYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHG--Y 244
EYL ++ ++RDL A NIL+ H K++DFGLAK P DK R G +
Sbjct: 125 EYLGSRR---CVHRDLAARNILVESEAHVKIADFGLAKLLPL-DKDXXVVREPGQSPIFW 180
Query: 245 CAPEYATTGKLTAKSDIFSFGVVLLELIT 273
APE + + +SD++SFGVVL EL T
Sbjct: 181 YAPESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 106/201 (52%), Gaps = 15/201 (7%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGF--QGEKEFLVEVLMLSLMRHPNLVHLIGY 137
+G G FG VYKGK VAVK L+ T Q + F EV +L RH N++ +GY
Sbjct: 16 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 138 CAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPV 197
+ Q +V ++ SL HL + + + + + IA A+G++YLH K+ +
Sbjct: 73 -STAPQLAIVTQWCEGSSLYHHLHIIETKFEMIK---LIDIARQTAQGMDYLHAKS---I 125
Query: 198 IYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATT---GK 254
I+RDLK+ NI L + K+ DFGLA SH ++ G+ + APE
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 185
Query: 255 LTAKSDIFSFGVVLLELITGR 275
+ +SD+++FG+VL EL+TG+
Sbjct: 186 YSFQSDVYAFGIVLYELMTGQ 206
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 101/195 (51%), Gaps = 11/195 (5%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLVHLIGYCA 139
LGQG FG V+ G T +V A+K L G + FL E ++ +RH LV L +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRV-AIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 140 EGTQRLLVYEYMPLGSLEDHLLGLTPEM-KPLDWNTRMKIAAGAARGLEYLHNKADPPVI 198
E +V EYM GSL D L G EM K L + +AA A G+ Y+ +
Sbjct: 84 E-EPIYIVIEYMSKGSLLDFLKG---EMGKYLRLPQLVDMAAQIASGMAYVERMN---YV 136
Query: 199 YRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTGKLTAK 258
+RDL+A NIL+G+ K++DFGLA+ + + + APE A G+ T K
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIK-WTAPEAALYGRFTIK 195
Query: 259 SDIFSFGVVLLELIT 273
SD++SFG++L EL T
Sbjct: 196 SDVWSFGILLTELTT 210
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 106/201 (52%), Gaps = 15/201 (7%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGF--QGEKEFLVEVLMLSLMRHPNLVHLIGY 137
+G G FG VYKGK VAVK L+ T Q + F EV +L RH N++ +GY
Sbjct: 16 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 138 CAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPV 197
+ Q +V ++ SL HL + + + + + IA A+G++YLH K+ +
Sbjct: 73 STK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIK---LIDIARQTAQGMDYLHAKS---I 125
Query: 198 IYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATT---GK 254
I+RDLK+ NI L + K+ DFGLA SH ++ G+ + APE
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 185
Query: 255 LTAKSDIFSFGVVLLELITGR 275
+ +SD+++FG+VL EL+TG+
Sbjct: 186 YSFQSDVYAFGIVLYELMTGQ 206
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 106/201 (52%), Gaps = 15/201 (7%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGF--QGEKEFLVEVLMLSLMRHPNLVHLIGY 137
+G G FG VYKGK VAVK L+ T Q + F EV +L RH N++ +GY
Sbjct: 21 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 77
Query: 138 CAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPV 197
+ Q +V ++ SL HL + + + + + IA A+G++YLH K+ +
Sbjct: 78 STK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIK---LIDIARQTAQGMDYLHAKS---I 130
Query: 198 IYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATT---GK 254
I+RDLK+ NI L + K+ DFGLA SH ++ G+ + APE
Sbjct: 131 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 190
Query: 255 LTAKSDIFSFGVVLLELITGR 275
+ +SD+++FG+VL EL+TG+
Sbjct: 191 YSFQSDVYAFGIVLYELMTGQ 211
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/196 (37%), Positives = 103/196 (52%), Gaps = 13/196 (6%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLVHLIGYCA 139
LGQG FG V+ G T +V A+K L G + FL E ++ +RH LV L +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRV-AIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 140 EGTQRLLVYEYMPLGSLEDHLLGLTPEM-KPLDWNTRMKIAAGAARGLEYLHNKADPPVI 198
E +V EYM GSL D L G EM K L + +AA A G+ Y+ +
Sbjct: 84 E-EPIYIVCEYMSKGSLLDFLKG---EMGKYLRLPQLVDMAAQIASGMAYVERMN---YV 136
Query: 199 YRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTR-VMGTHGYCAPEYATTGKLTA 257
+RDL+A NIL+G+ K++DFGLA+ D + + + + APE A G+ T
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAALYGRFTI 194
Query: 258 KSDIFSFGVVLLELIT 273
KSD++SFG++L EL T
Sbjct: 195 KSDVWSFGILLTELTT 210
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 106/201 (52%), Gaps = 15/201 (7%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGF--QGEKEFLVEVLMLSLMRHPNLVHLIGY 137
+G G FG VYKGK VAVK L+ T Q + F EV +L RH N++ +GY
Sbjct: 21 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 77
Query: 138 CAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPV 197
+ Q +V ++ SL HL + + + + + IA A+G++YLH K+ +
Sbjct: 78 STK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIK---LIDIARQTAQGMDYLHAKS---I 130
Query: 198 IYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATT---GK 254
I+RDLK+ NI L + K+ DFGLA SH ++ G+ + APE
Sbjct: 131 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 190
Query: 255 LTAKSDIFSFGVVLLELITGR 275
+ +SD+++FG+VL EL+TG+
Sbjct: 191 YSFQSDVYAFGIVLYELMTGQ 211
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/196 (37%), Positives = 103/196 (52%), Gaps = 13/196 (6%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLVHLIGYCA 139
LGQG FG V+ G T +V A+K L G + FL E ++ +RH LV L +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRV-AIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 140 EGTQRLLVYEYMPLGSLEDHLLGLTPEM-KPLDWNTRMKIAAGAARGLEYLHNKADPPVI 198
E +V EYM GSL D L G EM K L + +AA A G+ Y+ +
Sbjct: 84 E-EPIYIVTEYMSKGSLLDFLKG---EMGKYLRLPQLVDMAAQIASGMAYVERMN---YV 136
Query: 199 YRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTR-VMGTHGYCAPEYATTGKLTA 257
+RDL+A NIL+G+ K++DFGLA+ D + + + + APE A G+ T
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAALYGRFTI 194
Query: 258 KSDIFSFGVVLLELIT 273
KSD++SFG++L EL T
Sbjct: 195 KSDVWSFGILLTELTT 210
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/196 (37%), Positives = 103/196 (52%), Gaps = 13/196 (6%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLVHLIGYCA 139
LGQG FG V+ G T +V A+K L G + FL E ++ +RH LV L +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRV-AIKTLK-PGTMSPEAFLQEAQVMKKIRHEKLVQLYAVVS 83
Query: 140 EGTQRLLVYEYMPLGSLEDHLLGLTPEM-KPLDWNTRMKIAAGAARGLEYLHNKADPPVI 198
E +V EYM GSL D L G EM K L + +AA A G+ Y+ +
Sbjct: 84 E-EPIYIVTEYMSKGSLLDFLKG---EMGKYLRLPQLVDMAAQIASGMAYVERMN---YV 136
Query: 199 YRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTR-VMGTHGYCAPEYATTGKLTA 257
+RDL+A NIL+G+ K++DFGLA+ D + + + + APE A G+ T
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAALYGRFTI 194
Query: 258 KSDIFSFGVVLLELIT 273
KSD++SFG++L EL T
Sbjct: 195 KSDVWSFGILLTELTT 210
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 91.7 bits (226), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 111/214 (51%), Gaps = 25/214 (11%)
Query: 74 FKDTNF-----LGQGGFGAVYKGKLAETGQV----VAVKQLDD-TGFQGEKEFLVEVLML 123
FK+T LG G FG V+KG G+ V +K ++D +G Q + +L +
Sbjct: 28 FKETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAI 87
Query: 124 SLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLL----GLTPEMKPLDWNTRMKIA 179
+ H ++V L+G C G+ LV +Y+PLGSL DH+ L P++ L+W ++
Sbjct: 88 GSLDHAHIVRLLGLCP-GSSLQLVTQYLPLGSLLDHVRQHRGALGPQLL-LNWGVQI--- 142
Query: 180 AGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVM 239
A+G+ YL +++R+L A N+LL +++DFG+A P DK + +
Sbjct: 143 ---AKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAK 196
Query: 240 GTHGYCAPEYATTGKLTAKSDIFSFGVVLLELIT 273
+ A E GK T +SD++S+GV + EL+T
Sbjct: 197 TPIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 230
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 91.7 bits (226), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 106/201 (52%), Gaps = 15/201 (7%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGF--QGEKEFLVEVLMLSLMRHPNLVHLIGY 137
+G G FG VYKGK VAVK L+ T Q + F EV +L RH N++ +GY
Sbjct: 44 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 100
Query: 138 CAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPV 197
+ Q +V ++ SL HL + + + + + IA A+G++YLH K+ +
Sbjct: 101 STK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKL---IDIARQTAQGMDYLHAKS---I 153
Query: 198 IYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATT---GK 254
I+RDLK+ NI L + K+ DFGLA SH ++ G+ + APE
Sbjct: 154 IHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 213
Query: 255 LTAKSDIFSFGVVLLELITGR 275
+ +SD+++FG+VL EL+TG+
Sbjct: 214 YSFQSDVYAFGIVLYELMTGQ 234
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 100/211 (47%), Gaps = 20/211 (9%)
Query: 80 LGQGGFGAVYKGKL-----AETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLVHL 134
LG+G FG V+ + + +VAVK L D K+F E +L+ ++H ++V
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF 82
Query: 135 IGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPE-MKPLDWNTR-----------MKIAAGA 182
G C +G ++V+EYM G L L P+ M +D R + IA+
Sbjct: 83 YGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQI 142
Query: 183 ARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTH 242
A G+ YL A ++RDL N L+G K+ DFG+++ + D V M
Sbjct: 143 ASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPI 199
Query: 243 GYCAPEYATTGKLTAKSDIFSFGVVLLELIT 273
+ PE K T +SD++SFGV+L E+ T
Sbjct: 200 RWMPPESIMYRKFTTESDVWSFGVILWEIFT 230
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 106/201 (52%), Gaps = 15/201 (7%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGF--QGEKEFLVEVLMLSLMRHPNLVHLIGY 137
+G G FG VYKGK VAVK L+ T Q + F EV +L RH N++ +GY
Sbjct: 36 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 92
Query: 138 CAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPV 197
+ Q +V ++ SL HL + + + + + IA A+G++YLH K+ +
Sbjct: 93 STK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKL---IDIARQTAQGMDYLHAKS---I 145
Query: 198 IYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATT---GK 254
I+RDLK+ NI L + K+ DFGLA SH ++ G+ + APE
Sbjct: 146 IHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 205
Query: 255 LTAKSDIFSFGVVLLELITGR 275
+ +SD+++FG+VL EL+TG+
Sbjct: 206 YSFQSDVYAFGIVLYELMTGQ 226
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 91.3 bits (225), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 71/195 (36%), Positives = 102/195 (52%), Gaps = 11/195 (5%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLVHLIGYCA 139
LGQG FG V+ G T +V A+K L G + FL E ++ +RH LV L +
Sbjct: 23 LGQGCFGEVWMGTWNGTTRV-AIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 80
Query: 140 EGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIY 199
E +V EYM GSL D L G T K L + ++A A G+ Y+ ++
Sbjct: 81 E-EPIYIVTEYMNKGSLLDFLKGETG--KYLRLPQLVDMSAQIASGMAYVERMN---YVH 134
Query: 200 RDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTR-VMGTHGYCAPEYATTGKLTAK 258
RDL+A NIL+G+ K++DFGLA+ D + + + + APE A G+ T K
Sbjct: 135 RDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 192
Query: 259 SDIFSFGVVLLELIT 273
SD++SFG++L EL T
Sbjct: 193 SDVWSFGILLTELTT 207
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 91.3 bits (225), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 111/214 (51%), Gaps = 25/214 (11%)
Query: 74 FKDTNF-----LGQGGFGAVYKGKLAETGQV----VAVKQLDD-TGFQGEKEFLVEVLML 123
FK+T LG G FG V+KG G+ V +K ++D +G Q + +L +
Sbjct: 10 FKETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAI 69
Query: 124 SLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLL----GLTPEMKPLDWNTRMKIA 179
+ H ++V L+G C G+ LV +Y+PLGSL DH+ L P++ L+W ++
Sbjct: 70 GSLDHAHIVRLLGLCP-GSSLQLVTQYLPLGSLLDHVRQHRGALGPQLL-LNWGVQI--- 124
Query: 180 AGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVM 239
A+G+ YL +++R+L A N+LL +++DFG+A P DK + +
Sbjct: 125 ---AKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAK 178
Query: 240 GTHGYCAPEYATTGKLTAKSDIFSFGVVLLELIT 273
+ A E GK T +SD++S+GV + EL+T
Sbjct: 179 TPIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 212
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 106/201 (52%), Gaps = 15/201 (7%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGF--QGEKEFLVEVLMLSLMRHPNLVHLIGY 137
+G G FG VYKGK VAVK L+ T Q + F EV +L RH N++ +GY
Sbjct: 16 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 138 CAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPV 197
+ Q +V ++ SL HL + + + + + IA A+G++YLH K+ +
Sbjct: 73 STK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIK---LIDIARQTAQGMDYLHAKS---I 125
Query: 198 IYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATT---GK 254
I+RDLK+ NI L + K+ DFGLA SH ++ G+ + APE
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 185
Query: 255 LTAKSDIFSFGVVLLELITGR 275
+ +SD+++FG+VL EL+TG+
Sbjct: 186 YSFQSDVYAFGIVLYELMTGQ 206
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 98/208 (47%), Gaps = 17/208 (8%)
Query: 80 LGQGGFGAVYKGKL-----AETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLVHL 134
LG+G FG V+ + + +VAVK L D K+F E +L+ ++H ++V
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKF 80
Query: 135 IGYCAEGTQRLLVYEYMPLGSLEDHLLG------LTPEMKP---LDWNTRMKIAAGAARG 185
G C EG ++V+EYM G L L L E P L + + IA A G
Sbjct: 81 YGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAG 140
Query: 186 LEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYC 245
+ YL A ++RDL N L+G+ K+ DFG+++ + D V M +
Sbjct: 141 MVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWM 197
Query: 246 APEYATTGKLTAKSDIFSFGVVLLELIT 273
PE K T +SD++S GVVL E+ T
Sbjct: 198 PPESIMYRKFTTESDVWSLGVVLWEIFT 225
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 102/206 (49%), Gaps = 15/206 (7%)
Query: 80 LGQGGFGAVYKGKL-----AETGQVVAVKQLDDTGFQGEK-EFLVEVLMLSLMRHPNLVH 133
LGQG FG VY+G E VAVK ++++ E+ EFL E ++ ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 134 LIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMK------PLDWNTRMKIAAGAARGLE 187
L+G ++G L+V E M G L+ +L L PE + P +++AA A G+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 188 YLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAP 247
YL+ K ++RDL A N ++ F K+ DFG+ + D + + + AP
Sbjct: 145 YLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAP 201
Query: 248 EYATTGKLTAKSDIFSFGVVLLELIT 273
E G T SD++SFGVVL E+ +
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 90.9 bits (224), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 102/206 (49%), Gaps = 15/206 (7%)
Query: 80 LGQGGFGAVYKGKL-----AETGQVVAVKQLDDTGFQGEK-EFLVEVLMLSLMRHPNLVH 133
LGQG FG VY+G E VAVK ++++ E+ EFL E ++ ++V
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 81
Query: 134 LIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMK------PLDWNTRMKIAAGAARGLE 187
L+G ++G L+V E M G L+ +L L PE + P +++AA A G+
Sbjct: 82 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 141
Query: 188 YLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAP 247
YL+ K ++RDL A N ++ F K+ DFG+ + D + + + AP
Sbjct: 142 YLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAP 198
Query: 248 EYATTGKLTAKSDIFSFGVVLLELIT 273
E G T SD++SFGVVL E+ +
Sbjct: 199 ESLKDGVFTTSSDMWSFGVVLWEITS 224
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 90.9 bits (224), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 73/196 (37%), Positives = 102/196 (52%), Gaps = 13/196 (6%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLVHLIGYCA 139
LGQG FG V+ G T +V A+K L G + FL E ++ +RH LV L +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRV-AIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 140 EGTQRLLVYEYMPLGSLEDHLLGLTPEM-KPLDWNTRMKIAAGAARGLEYLHNKADPPVI 198
E +V EYM GSL D L G EM K L + +AA A G+ Y+ +
Sbjct: 84 E-EPIYIVTEYMSKGSLLDFLKG---EMGKYLRLPQLVDMAAQIASGMAYVERMN---YV 136
Query: 199 YRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTR-VMGTHGYCAPEYATTGKLTA 257
+RDL A NIL+G+ K++DFGLA+ D + + + + APE A G+ T
Sbjct: 137 HRDLAAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAALYGRFTI 194
Query: 258 KSDIFSFGVVLLELIT 273
KSD++SFG++L EL T
Sbjct: 195 KSDVWSFGILLTELTT 210
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 90.9 bits (224), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 102/206 (49%), Gaps = 15/206 (7%)
Query: 80 LGQGGFGAVYKGKL-----AETGQVVAVKQLDDTGFQGEK-EFLVEVLMLSLMRHPNLVH 133
LGQG FG VY+G E VAVK ++++ E+ EFL E ++ ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 134 LIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMK------PLDWNTRMKIAAGAARGLE 187
L+G ++G L+V E M G L+ +L L PE + P +++AA A G+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 188 YLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAP 247
YL+ K ++RDL A N ++ F K+ DFG+ + D + + + AP
Sbjct: 145 YLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAP 201
Query: 248 EYATTGKLTAKSDIFSFGVVLLELIT 273
E G T SD++SFGVVL E+ +
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 90.9 bits (224), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 72/196 (36%), Positives = 102/196 (52%), Gaps = 13/196 (6%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLVHLIGYCA 139
LGQG FG V+ G T +V A+K L G + FL E ++ +RH LV L +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRV-AIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 140 EGTQRLLVYEYMPLGSLEDHLLGLTPEM-KPLDWNTRMKIAAGAARGLEYLHNKADPPVI 198
E +V EYM G L D L G EM K L + +AA A G+ Y+ +
Sbjct: 84 E-EPIYIVMEYMSKGCLLDFLKG---EMGKYLRLPQLVDMAAQIASGMAYVERMN---YV 136
Query: 199 YRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTR-VMGTHGYCAPEYATTGKLTA 257
+RDL+A NIL+G+ K++DFGLA+ D + + + + APE A G+ T
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAALYGRFTI 194
Query: 258 KSDIFSFGVVLLELIT 273
KSD++SFG++L EL T
Sbjct: 195 KSDVWSFGILLTELTT 210
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 70/194 (36%), Positives = 100/194 (51%), Gaps = 9/194 (4%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLVHLIGYCA 139
LGQG FG V+ G T +V A+K L G + FL E ++ +RH LV L +
Sbjct: 23 LGQGCFGEVWMGTWNGTTRV-AIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 80
Query: 140 EGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIY 199
E +V EYM GSL D L G T K L + ++A A G+ Y+ ++
Sbjct: 81 E-EPIYIVTEYMNKGSLLDFLKGETG--KYLRLPQLVDMSAQIASGMAYVERMN---YVH 134
Query: 200 RDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTGKLTAKS 259
RDL+A NIL+G+ K++DFGLA+ + + + APE A G+ T KS
Sbjct: 135 RDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIK-WTAPEAALYGRFTIKS 193
Query: 260 DIFSFGVVLLELIT 273
D++SFG++L EL T
Sbjct: 194 DVWSFGILLTELTT 207
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 75/212 (35%), Positives = 113/212 (53%), Gaps = 20/212 (9%)
Query: 80 LGQGGFGAVYKGKLAET-GQVV--AVKQLDDTGFQGE-KEFLVEVLMLSLMRHPNLVHLI 135
+G+G FG VY G L + G+ + AVK L+ GE +FL E +++ HPN++ L+
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 95
Query: 136 GYC--AEGTQRLLVYEYMPLGSLEDHLLGLT--PEMKPLDWNTRMKIAAGAARGLEYLHN 191
G C +EG+ L+V YM G L + + T P +K L + A+G+++L +
Sbjct: 96 GICLRSEGSP-LVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKFLAS 149
Query: 192 KADPPVIYRDLKAGNILLGKGFHPKLSDFGLAK--FGPTGDKSHVSTRVMGTHGYCAPEY 249
K ++RDL A N +L + F K++DFGLA+ + D H T + A E
Sbjct: 150 KK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 206
Query: 250 ATTGKLTAKSDIFSFGVVLLELIT-GRPAMDD 280
T K T KSD++SFGV+L EL+T G P D
Sbjct: 207 LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD 238
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 90.5 bits (223), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 72/196 (36%), Positives = 102/196 (52%), Gaps = 13/196 (6%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLVHLIGYCA 139
LGQG FG V+ G T +V A+K L G + FL E ++ +RH LV L +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRV-AIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 140 EGTQRLLVYEYMPLGSLEDHLLGLTPEM-KPLDWNTRMKIAAGAARGLEYLHNKADPPVI 198
E +V EYM G L D L G EM K L + +AA A G+ Y+ +
Sbjct: 84 E-EPIYIVTEYMSKGCLLDFLKG---EMGKYLRLPQLVDMAAQIASGMAYVERMN---YV 136
Query: 199 YRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTR-VMGTHGYCAPEYATTGKLTA 257
+RDL+A NIL+G+ K++DFGLA+ D + + + + APE A G+ T
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAALYGRFTI 194
Query: 258 KSDIFSFGVVLLELIT 273
KSD++SFG++L EL T
Sbjct: 195 KSDVWSFGILLTELTT 210
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 90.5 bits (223), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 72/196 (36%), Positives = 102/196 (52%), Gaps = 13/196 (6%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLVHLIGYCA 139
LGQG FG V+ G T +V A+K L G + FL E ++ +RH LV L +
Sbjct: 193 LGQGCFGEVWMGTWNGTTRV-AIKTLK-PGNMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 250
Query: 140 EGTQRLLVYEYMPLGSLEDHLLGLTPEM-KPLDWNTRMKIAAGAARGLEYLHNKADPPVI 198
E +V EYM GSL D L G EM K L + +AA A G+ Y+ +
Sbjct: 251 E-EPIYIVTEYMSKGSLLDFLKG---EMGKYLRLPQLVDMAAQIASGMAYVERMN---YV 303
Query: 199 YRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTR-VMGTHGYCAPEYATTGKLTA 257
+RDL+A NIL+G+ K++DFGL + D + + + + APE A G+ T
Sbjct: 304 HRDLRAANILVGENLVCKVADFGLGRL--IEDNEYTARQGAKFPIKWTAPEAALYGRFTI 361
Query: 258 KSDIFSFGVVLLELIT 273
KSD++SFG++L EL T
Sbjct: 362 KSDVWSFGILLTELTT 377
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 108/215 (50%), Gaps = 17/215 (7%)
Query: 75 KDTNFLGQGGFGAVYKGKLAETGQ---VVAVKQLDDTGF--QGEKEFLVEVLMLSLMRHP 129
K +G G FG V G L G+ VA+K L +G+ + ++FL E ++ HP
Sbjct: 36 KIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLK-SGYTEKQRRDFLSEASIMGQFDHP 94
Query: 130 NLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYL 189
N++HL G + T +++ E+M GSL+ L + + ++ G A G++YL
Sbjct: 95 NVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLR---GIAAGMKYL 151
Query: 190 HNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTH---GYCA 246
AD ++RDL A NIL+ K+SDFGL++F T +G + A
Sbjct: 152 ---ADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTA 208
Query: 247 PEYATTGKLTAKSDIFSFGVVLLELIT--GRPAMD 279
PE K T+ SD++S+G+V+ E+++ RP D
Sbjct: 209 PEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWD 243
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 107/218 (49%), Gaps = 17/218 (7%)
Query: 69 AATDNFKDTNFLGQGGFGAVYKGKLA-----ETGQVVAVKQLDDTGFQGEK-EFLVEVLM 122
A + + LGQG FG VY+G E VA+K +++ E+ EFL E +
Sbjct: 7 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 66
Query: 123 LSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMK------PLDWNTRM 176
+ ++V L+G ++G L++ E M G L+ +L L PEM+ P + +
Sbjct: 67 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 126
Query: 177 KIAAGAARGLEYLH-NKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVS 235
++A A G+ YL+ NK ++RDL A N ++ + F K+ DFG+ + D
Sbjct: 127 QMAGEIADGMAYLNANK----FVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKG 182
Query: 236 TRVMGTHGYCAPEYATTGKLTAKSDIFSFGVVLLELIT 273
+ + + +PE G T SD++SFGVVL E+ T
Sbjct: 183 GKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 220
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/212 (35%), Positives = 113/212 (53%), Gaps = 20/212 (9%)
Query: 80 LGQGGFGAVYKGKLAET-GQVV--AVKQLDDTGFQGE-KEFLVEVLMLSLMRHPNLVHLI 135
+G+G FG VY G L + G+ + AVK L+ GE +FL E +++ HPN++ L+
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 136 GYC--AEGTQRLLVYEYMPLGSLEDHLLGLT--PEMKPLDWNTRMKIAAGAARGLEYLHN 191
G C +EG+ L+V YM G L + + T P +K L + A+G+++L +
Sbjct: 98 GICLRSEGSP-LVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKFLAS 151
Query: 192 KADPPVIYRDLKAGNILLGKGFHPKLSDFGLAK--FGPTGDKSHVSTRVMGTHGYCAPEY 249
K ++RDL A N +L + F K++DFGLA+ + D H T + A E
Sbjct: 152 KK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 208
Query: 250 ATTGKLTAKSDIFSFGVVLLELIT-GRPAMDD 280
T K T KSD++SFGV+L EL+T G P D
Sbjct: 209 LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD 240
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/212 (35%), Positives = 113/212 (53%), Gaps = 20/212 (9%)
Query: 80 LGQGGFGAVYKGKLAET-GQVV--AVKQLDDTGFQGE-KEFLVEVLMLSLMRHPNLVHLI 135
+G+G FG VY G L + G+ + AVK L+ GE +FL E +++ HPN++ L+
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 136 GYC--AEGTQRLLVYEYMPLGSLEDHLLGLT--PEMKPLDWNTRMKIAAGAARGLEYLHN 191
G C +EG+ L+V YM G L + + T P +K L + A+G+++L +
Sbjct: 98 GICLRSEGSP-LVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKFLAS 151
Query: 192 KADPPVIYRDLKAGNILLGKGFHPKLSDFGLAK--FGPTGDKSHVSTRVMGTHGYCAPEY 249
K ++RDL A N +L + F K++DFGLA+ + D H T + A E
Sbjct: 152 KK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 208
Query: 250 ATTGKLTAKSDIFSFGVVLLELIT-GRPAMDD 280
T K T KSD++SFGV+L EL+T G P D
Sbjct: 209 LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD 240
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 104/207 (50%), Gaps = 17/207 (8%)
Query: 80 LGQGGFGAVYKGKLA-----ETGQVVAVKQLDDTGFQGEK-EFLVEVLMLSLMRHPNLVH 133
LGQG FG VY+G E VA+K +++ E+ EFL E ++ ++V
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 86
Query: 134 LIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMK------PLDWNTRMKIAAGAARGLE 187
L+G ++G L++ E M G L+ +L L PEM+ P + +++A A G+
Sbjct: 87 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 146
Query: 188 YLH-NKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCA 246
YL+ NK ++RDL A N ++ + F K+ DFG+ + D + + + +
Sbjct: 147 YLNANK----FVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMS 202
Query: 247 PEYATTGKLTAKSDIFSFGVVLLELIT 273
PE G T SD++SFGVVL E+ T
Sbjct: 203 PESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/212 (35%), Positives = 113/212 (53%), Gaps = 20/212 (9%)
Query: 80 LGQGGFGAVYKGKLAET-GQVV--AVKQLDDTGFQGE-KEFLVEVLMLSLMRHPNLVHLI 135
+G+G FG VY G L + G+ + AVK L+ GE +FL E +++ HPN++ L+
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 98
Query: 136 GYC--AEGTQRLLVYEYMPLGSLEDHLLGLT--PEMKPLDWNTRMKIAAGAARGLEYLHN 191
G C +EG+ L+V YM G L + + T P +K L + A+G+++L +
Sbjct: 99 GICLRSEGSP-LVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKFLAS 152
Query: 192 KADPPVIYRDLKAGNILLGKGFHPKLSDFGLAK--FGPTGDKSHVSTRVMGTHGYCAPEY 249
K ++RDL A N +L + F K++DFGLA+ + D H T + A E
Sbjct: 153 KK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 209
Query: 250 ATTGKLTAKSDIFSFGVVLLELIT-GRPAMDD 280
T K T KSD++SFGV+L EL+T G P D
Sbjct: 210 LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD 241
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/212 (35%), Positives = 113/212 (53%), Gaps = 20/212 (9%)
Query: 80 LGQGGFGAVYKGKLAET-GQVV--AVKQLDDTGFQGE-KEFLVEVLMLSLMRHPNLVHLI 135
+G+G FG VY G L + G+ + AVK L+ GE +FL E +++ HPN++ L+
Sbjct: 43 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 102
Query: 136 GYC--AEGTQRLLVYEYMPLGSLEDHLLGLT--PEMKPLDWNTRMKIAAGAARGLEYLHN 191
G C +EG+ L+V YM G L + + T P +K L + A+G+++L +
Sbjct: 103 GICLRSEGSP-LVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKFLAS 156
Query: 192 KADPPVIYRDLKAGNILLGKGFHPKLSDFGLAK--FGPTGDKSHVSTRVMGTHGYCAPEY 249
K ++RDL A N +L + F K++DFGLA+ + D H T + A E
Sbjct: 157 KK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 213
Query: 250 ATTGKLTAKSDIFSFGVVLLELIT-GRPAMDD 280
T K T KSD++SFGV+L EL+T G P D
Sbjct: 214 LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD 245
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 99/194 (51%), Gaps = 9/194 (4%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLVHLIGYCA 139
+G G FG V+ G +V A+K + + G E++F+ E ++ + HP LV L G C
Sbjct: 13 IGSGQFGLVHLGYWLNKDKV-AIKTIRE-GAMSEEDFIEEAEVMMKLSHPKLVQLYGVCL 70
Query: 140 EGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIY 199
E LV+E+M G L D+ L + T + + G+ YL VI+
Sbjct: 71 EQAPICLVFEFMEHGCLSDY---LRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIH 124
Query: 200 RDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTGKLTAKS 259
RDL A N L+G+ K+SDFG+ +F D+ ST + +PE + + ++KS
Sbjct: 125 RDLAARNCLVGENQVIKVSDFGMTRF-VLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 183
Query: 260 DIFSFGVVLLELIT 273
D++SFGV++ E+ +
Sbjct: 184 DVWSFGVLMWEVFS 197
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/212 (33%), Positives = 108/212 (50%), Gaps = 13/212 (6%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLVHLIGYCA 139
LG G FG V+ G +V A+K L G + FL E ++ ++H LV L +
Sbjct: 17 LGNGQFGEVWMGTWNGNTKV-AIKTLK-PGTMSPESFLEEAQIMKKLKHDKLVQLYAVVS 74
Query: 140 EGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIY 199
E +V EYM GSL D L E + L + +AA A G+ Y+ I+
Sbjct: 75 E-EPIYIVTEYMNKGSLLDFLK--DGEGRALKLPNLVDMAAQVAAGMAYIERMN---YIH 128
Query: 200 RDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTGKLTAKS 259
RDL++ NIL+G G K++DFGLA+ + + + APE A G+ T KS
Sbjct: 129 RDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIK-WTAPEAALYGRFTIKS 187
Query: 260 DIFSFGVVLLELIT-GR---PAMDDSQGHERM 287
D++SFG++L EL+T GR P M++ + E++
Sbjct: 188 DVWSFGILLTELVTKGRVPYPGMNNREVLEQV 219
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 100/194 (51%), Gaps = 9/194 (4%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLVHLIGYCA 139
+G G FG V+ G +V A+K + + G E++F+ E ++ + HP LV L G C
Sbjct: 15 IGSGQFGLVHLGYWLNKDKV-AIKTIRE-GAMSEEDFIEEAEVMMKLSHPKLVQLYGVCL 72
Query: 140 EGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIY 199
E LV+E+M G L D+ L + T + + G+ YL + VI+
Sbjct: 73 EQAPICLVFEFMEHGCLSDY---LRTQRGLFAAETLLGMCLDVCEGMAYLE---EASVIH 126
Query: 200 RDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTGKLTAKS 259
RDL A N L+G+ K+SDFG+ +F D+ ST + +PE + + ++KS
Sbjct: 127 RDLAARNCLVGENQVIKVSDFGMTRF-VLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 185
Query: 260 DIFSFGVVLLELIT 273
D++SFGV++ E+ +
Sbjct: 186 DVWSFGVLMWEVFS 199
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 99/194 (51%), Gaps = 9/194 (4%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLVHLIGYCA 139
+G G FG V+ G +V A+K + + G E++F+ E ++ + HP LV L G C
Sbjct: 18 IGSGQFGLVHLGYWLNKDKV-AIKTIRE-GAMSEEDFIEEAEVMMKLSHPKLVQLYGVCL 75
Query: 140 EGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIY 199
E LV+E+M G L D+ L + T + + G+ YL VI+
Sbjct: 76 EQAPICLVFEFMEHGCLSDY---LRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIH 129
Query: 200 RDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTGKLTAKS 259
RDL A N L+G+ K+SDFG+ +F D+ ST + +PE + + ++KS
Sbjct: 130 RDLAARNCLVGENQVIKVSDFGMTRF-VLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 188
Query: 260 DIFSFGVVLLELIT 273
D++SFGV++ E+ +
Sbjct: 189 DVWSFGVLMWEVFS 202
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/212 (35%), Positives = 113/212 (53%), Gaps = 20/212 (9%)
Query: 80 LGQGGFGAVYKGKLAET-GQVV--AVKQLDDTGFQGE-KEFLVEVLMLSLMRHPNLVHLI 135
+G+G FG VY G L + G+ + AVK L+ GE +FL E +++ HPN++ L+
Sbjct: 97 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 156
Query: 136 GYC--AEGTQRLLVYEYMPLGSLEDHLLGLT--PEMKPLDWNTRMKIAAGAARGLEYLHN 191
G C +EG+ L+V YM G L + + T P +K L + A+G+++L +
Sbjct: 157 GICLRSEGSP-LVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKFLAS 210
Query: 192 KADPPVIYRDLKAGNILLGKGFHPKLSDFGLAK--FGPTGDKSHVSTRVMGTHGYCAPEY 249
K ++RDL A N +L + F K++DFGLA+ + D H T + A E
Sbjct: 211 KK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 267
Query: 250 ATTGKLTAKSDIFSFGVVLLELIT-GRPAMDD 280
T K T KSD++SFGV+L EL+T G P D
Sbjct: 268 LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD 299
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/212 (35%), Positives = 112/212 (52%), Gaps = 20/212 (9%)
Query: 80 LGQGGFGAVYKGKLAET-GQVV--AVKQLDDTGFQGE-KEFLVEVLMLSLMRHPNLVHLI 135
+G+G FG VY G L + G+ + AVK L+ GE +FL E +++ HPN++ L+
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 96
Query: 136 GYC--AEGTQRLLVYEYMPLGSLEDHLLGLT--PEMKPLDWNTRMKIAAGAARGLEYLHN 191
G C +EG+ L+V YM G L + + T P +K L + A+G++YL +
Sbjct: 97 GICLRSEGSP-LVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKYLAS 150
Query: 192 KADPPVIYRDLKAGNILLGKGFHPKLSDFGLAK--FGPTGDKSHVSTRVMGTHGYCAPEY 249
K ++RDL A N +L + F K++DFGLA+ + H T + A E
Sbjct: 151 KK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALES 207
Query: 250 ATTGKLTAKSDIFSFGVVLLELIT-GRPAMDD 280
T K T KSD++SFGV+L EL+T G P D
Sbjct: 208 LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD 239
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 99/194 (51%), Gaps = 9/194 (4%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLVHLIGYCA 139
+G G FG V+ G +V A+K + + G E++F+ E ++ + HP LV L G C
Sbjct: 15 IGSGQFGLVHLGYWLNKDKV-AIKTIRE-GAMSEEDFIEEAEVMMKLSHPKLVQLYGVCL 72
Query: 140 EGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIY 199
E LV+E+M G L D+ L + T + + G+ YL VI+
Sbjct: 73 EQAPICLVFEFMEHGCLSDY---LRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIH 126
Query: 200 RDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTGKLTAKS 259
RDL A N L+G+ K+SDFG+ +F D+ ST + +PE + + ++KS
Sbjct: 127 RDLAARNCLVGENQVIKVSDFGMTRF-VLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 185
Query: 260 DIFSFGVVLLELIT 273
D++SFGV++ E+ +
Sbjct: 186 DVWSFGVLMWEVFS 199
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 98/194 (50%), Gaps = 9/194 (4%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLVHLIGYCA 139
+G G FG V+ G +V A+K + + G E +F+ E ++ + HP LV L G C
Sbjct: 35 IGSGQFGLVHLGYWLNKDKV-AIKTIKE-GSMSEDDFIEEAEVMMKLSHPKLVQLYGVCL 92
Query: 140 EGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIY 199
E LV+E+M G L D+ L + T + + G+ YL VI+
Sbjct: 93 EQAPICLVFEFMEHGCLSDY---LRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIH 146
Query: 200 RDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTGKLTAKS 259
RDL A N L+G+ K+SDFG+ +F D+ ST + +PE + + ++KS
Sbjct: 147 RDLAARNCLVGENQVIKVSDFGMTRF-VLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 205
Query: 260 DIFSFGVVLLELIT 273
D++SFGV++ E+ +
Sbjct: 206 DVWSFGVLMWEVFS 219
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/212 (35%), Positives = 112/212 (52%), Gaps = 20/212 (9%)
Query: 80 LGQGGFGAVYKGKLAET-GQVV--AVKQLDDTGFQGE-KEFLVEVLMLSLMRHPNLVHLI 135
+G+G FG VY G L + G+ + AVK L+ GE +FL E +++ HPN++ L+
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 98
Query: 136 GYC--AEGTQRLLVYEYMPLGSLEDHLLGLT--PEMKPLDWNTRMKIAAGAARGLEYLHN 191
G C +EG+ L+V YM G L + + T P +K L + A+G+++L +
Sbjct: 99 GICLRSEGSP-LVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKFLAS 152
Query: 192 KADPPVIYRDLKAGNILLGKGFHPKLSDFGLAK--FGPTGDKSHVSTRVMGTHGYCAPEY 249
K ++RDL A N +L + F K++DFGLA+ D H T + A E
Sbjct: 153 KK---FVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALES 209
Query: 250 ATTGKLTAKSDIFSFGVVLLELIT-GRPAMDD 280
T K T KSD++SFGV+L EL+T G P D
Sbjct: 210 LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD 241
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 102/206 (49%), Gaps = 15/206 (7%)
Query: 80 LGQGGFGAVYKGKL-----AETGQVVAVKQLDDTGFQGEK-EFLVEVLMLSLMRHPNLVH 133
LGQG FG VY+G E VAVK ++++ E+ EFL E ++ ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 134 LIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMK------PLDWNTRMKIAAGAARGLE 187
L+G ++G L+V E M G L+ +L L PE + P +++AA A G+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 188 YLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAP 247
YL+ K ++RDL A N ++ F K+ DFG+ + D + + + AP
Sbjct: 145 YLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 201
Query: 248 EYATTGKLTAKSDIFSFGVVLLELIT 273
E G T SD++SFGVVL E+ +
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 110/227 (48%), Gaps = 17/227 (7%)
Query: 60 NTFTYRQLVAATDNFKDTNFLGQGGFGAVYKGKLA-----ETGQVVAVKQLDDTGFQGEK 114
+ F + A + + LGQG FG VY+G E VA+K +++ E+
Sbjct: 4 DVFVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRER 63
Query: 115 -EFLVEVLMLSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMK----- 168
EFL E ++ ++V L+G ++G L++ E M G L+ +L L PEM+
Sbjct: 64 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 123
Query: 169 -PLDWNTRMKIAAGAARGLEYLH-NKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFG 226
P + +++A A G+ YL+ NK ++RDL A N ++ + F K+ DFG+ +
Sbjct: 124 APPSLSKMIQMAGEIADGMAYLNANK----FVHRDLAARNCMVAEDFTVKIGDFGMTRDI 179
Query: 227 PTGDKSHVSTRVMGTHGYCAPEYATTGKLTAKSDIFSFGVVLLELIT 273
D + + + +PE G T SD++SFGVVL E+ T
Sbjct: 180 YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 226
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 104/214 (48%), Gaps = 11/214 (5%)
Query: 64 YRQLVAATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLD-DTGFQGEKEFLVEVLM 122
Y Q + + F +G+G FG V+KG T +VVA+K +D + ++ E+ +
Sbjct: 19 YFQSMDPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITV 78
Query: 123 LSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGA 182
LS P + G + T+ ++ EY+ GS D L E PLD I
Sbjct: 79 LSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL-----EPGPLDETQIATILREI 133
Query: 183 ARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTH 242
+GL+YLH++ I+RD+KA N+LL + KL+DFG+A G D +GT
Sbjct: 134 LKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNTFVGTP 188
Query: 243 GYCAPEYATTGKLTAKSDIFSFGVVLLELITGRP 276
+ APE +K+DI+S G+ +EL G P
Sbjct: 189 FWMAPEVIKQSAYDSKADIWSLGITAIELARGEP 222
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 104/212 (49%), Gaps = 27/212 (12%)
Query: 80 LGQGGFGAVYKGKL-----AETGQVVAVKQLDDTGFQGEK-EFLVEVLMLSLMRHPNLVH 133
LGQG FG VY+G E VAVK ++++ E+ EFL E ++ ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 134 LIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMK------PLDWNTRMKIAAGAARGLE 187
L+G ++G L+V E M G L+ +L L PE + P +++AA A G+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 188 YLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAK------FGPTGDKSHVSTRVMGT 241
YL+ K ++RDL A N ++ F K+ DFG+ + + G K + R M
Sbjct: 145 YLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRWM-- 199
Query: 242 HGYCAPEYATTGKLTAKSDIFSFGVVLLELIT 273
APE G T SD++SFGVVL E+ +
Sbjct: 200 ----APESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 102/206 (49%), Gaps = 15/206 (7%)
Query: 80 LGQGGFGAVYKGKL-----AETGQVVAVKQLDDTGFQGEK-EFLVEVLMLSLMRHPNLVH 133
LGQG FG VY+G E VAVK ++++ E+ EFL E ++ ++V
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 83
Query: 134 LIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMK------PLDWNTRMKIAAGAARGLE 187
L+G ++G L+V E M G L+ +L L PE + P +++AA A G+
Sbjct: 84 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 143
Query: 188 YLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAP 247
YL+ K ++RDL A N ++ F K+ DFG+ + D + + + AP
Sbjct: 144 YLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 200
Query: 248 EYATTGKLTAKSDIFSFGVVLLELIT 273
E G T SD++SFGVVL E+ +
Sbjct: 201 ESLKDGVFTTSSDMWSFGVVLWEITS 226
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 84/256 (32%), Positives = 127/256 (49%), Gaps = 25/256 (9%)
Query: 38 ETPARRNTLDDTLSAHENKNKENTFTYRQLVAATDNF--KDTNFLGQGGFGAVYKGKLAE 95
+P +NT+ LSA N E + +V + +G+G FG VY G L +
Sbjct: 16 SSPLLQNTVHIDLSA---LNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLD 72
Query: 96 T-GQVV--AVKQLDDTGFQGE-KEFLVEVLMLSLMRHPNLVHLIGYC--AEGTQRLLVYE 149
G+ + AVK L+ GE +FL E +++ HPN++ L+G C +EG+ L+V
Sbjct: 73 NDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSP-LVVLP 131
Query: 150 YMPLGSLEDHLLGLT--PEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIYRDLKAGNI 207
YM G L + + T P +K L + A+G++YL +K ++RDL A N
Sbjct: 132 YMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKYLASKK---FVHRDLAARNC 183
Query: 208 LLGKGFHPKLSDFGLAK--FGPTGDKSHVSTRVMGTHGYCAPEYATTGKLTAKSDIFSFG 265
+L + F K++DFGLA+ + H T + A E T K T KSD++SFG
Sbjct: 184 MLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFG 243
Query: 266 VVLLELIT-GRPAMDD 280
V+L EL+T G P D
Sbjct: 244 VLLWELMTRGAPPYPD 259
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 99/198 (50%), Gaps = 11/198 (5%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLVHLIGYCA 139
+G G FG VYKGK V +K +D T Q + F EV +L RH N++ +GY
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQA-FRNEVAVLRKTRHVNILLFMGYMT 102
Query: 140 EGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIY 199
+ +V ++ SL HL + + + IA A+G++YLH K +I+
Sbjct: 103 KDN-LAIVTQWCEGSSLYKHLHVQETKFQMFQL---IDIARQTAQGMDYLHAKN---IIH 155
Query: 200 RDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYAT---TGKLT 256
RD+K+ NI L +G K+ DFGLA S + G+ + APE +
Sbjct: 156 RDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFS 215
Query: 257 AKSDIFSFGVVLLELITG 274
+SD++S+G+VL EL+TG
Sbjct: 216 FQSDVYSYGIVLYELMTG 233
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 84/256 (32%), Positives = 127/256 (49%), Gaps = 25/256 (9%)
Query: 38 ETPARRNTLDDTLSAHENKNKENTFTYRQLVAATDNF--KDTNFLGQGGFGAVYKGKLAE 95
+P +NT+ LSA N E + +V + +G+G FG VY G L +
Sbjct: 15 SSPLLQNTVHIDLSA---LNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLD 71
Query: 96 T-GQVV--AVKQLDDTGFQGE-KEFLVEVLMLSLMRHPNLVHLIGYC--AEGTQRLLVYE 149
G+ + AVK L+ GE +FL E +++ HPN++ L+G C +EG+ L+V
Sbjct: 72 NDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSP-LVVLP 130
Query: 150 YMPLGSLEDHLLGLT--PEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIYRDLKAGNI 207
YM G L + + T P +K L + A+G++YL +K ++RDL A N
Sbjct: 131 YMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKYLASKK---FVHRDLAARNC 182
Query: 208 LLGKGFHPKLSDFGLAK--FGPTGDKSHVSTRVMGTHGYCAPEYATTGKLTAKSDIFSFG 265
+L + F K++DFGLA+ + H T + A E T K T KSD++SFG
Sbjct: 183 MLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFG 242
Query: 266 VVLLELIT-GRPAMDD 280
V+L EL+T G P D
Sbjct: 243 VLLWELMTRGAPPYPD 258
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 104/207 (50%), Gaps = 17/207 (8%)
Query: 80 LGQGGFGAVYKGKLA-----ETGQVVAVKQLDDTGFQGEK-EFLVEVLMLSLMRHPNLVH 133
LGQG FG VY+G E VA+K +++ E+ EFL E ++ ++V
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 92
Query: 134 LIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMK------PLDWNTRMKIAAGAARGLE 187
L+G ++G L++ E M G L+ +L L PEM+ P + +++A A G+
Sbjct: 93 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 152
Query: 188 YLH-NKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCA 246
YL+ NK ++RDL A N ++ + F K+ DFG+ + D + + + +
Sbjct: 153 YLNANK----FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 208
Query: 247 PEYATTGKLTAKSDIFSFGVVLLELIT 273
PE G T SD++SFGVVL E+ T
Sbjct: 209 PESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 104/207 (50%), Gaps = 17/207 (8%)
Query: 80 LGQGGFGAVYKGKLA-----ETGQVVAVKQLDDTGFQGEK-EFLVEVLMLSLMRHPNLVH 133
LGQG FG VY+G E VA+K +++ E+ EFL E ++ ++V
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 85
Query: 134 LIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMK------PLDWNTRMKIAAGAARGLE 187
L+G ++G L++ E M G L+ +L L PEM+ P + +++A A G+
Sbjct: 86 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 145
Query: 188 YLH-NKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCA 246
YL+ NK ++RDL A N ++ + F K+ DFG+ + D + + + +
Sbjct: 146 YLNANK----FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 201
Query: 247 PEYATTGKLTAKSDIFSFGVVLLELIT 273
PE G T SD++SFGVVL E+ T
Sbjct: 202 PESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 104/207 (50%), Gaps = 17/207 (8%)
Query: 80 LGQGGFGAVYKGKLA-----ETGQVVAVKQLDDTGFQGEK-EFLVEVLMLSLMRHPNLVH 133
LGQG FG VY+G E VA+K +++ E+ EFL E ++ ++V
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 85
Query: 134 LIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMK------PLDWNTRMKIAAGAARGLE 187
L+G ++G L++ E M G L+ +L L PEM+ P + +++A A G+
Sbjct: 86 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 145
Query: 188 YLH-NKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCA 246
YL+ NK ++RDL A N ++ + F K+ DFG+ + D + + + +
Sbjct: 146 YLNANK----FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 201
Query: 247 PEYATTGKLTAKSDIFSFGVVLLELIT 273
PE G T SD++SFGVVL E+ T
Sbjct: 202 PESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 104/207 (50%), Gaps = 17/207 (8%)
Query: 80 LGQGGFGAVYKGKLA-----ETGQVVAVKQLDDTGFQGEK-EFLVEVLMLSLMRHPNLVH 133
LGQG FG VY+G E VA+K +++ E+ EFL E ++ ++V
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 79
Query: 134 LIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMK------PLDWNTRMKIAAGAARGLE 187
L+G ++G L++ E M G L+ +L L PEM+ P + +++A A G+
Sbjct: 80 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 139
Query: 188 YLH-NKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCA 246
YL+ NK ++RDL A N ++ + F K+ DFG+ + D + + + +
Sbjct: 140 YLNANK----FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 195
Query: 247 PEYATTGKLTAKSDIFSFGVVLLELIT 273
PE G T SD++SFGVVL E+ T
Sbjct: 196 PESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/212 (35%), Positives = 112/212 (52%), Gaps = 20/212 (9%)
Query: 80 LGQGGFGAVYKGKLAET-GQVV--AVKQLDDTGFQGE-KEFLVEVLMLSLMRHPNLVHLI 135
+G+G FG VY G L + G+ + AVK L+ GE +FL E +++ HPN++ L+
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 136 GYC--AEGTQRLLVYEYMPLGSLEDHLLGLT--PEMKPLDWNTRMKIAAGAARGLEYLHN 191
G C +EG+ L+V YM G L + + T P +K L + A+G++YL +
Sbjct: 98 GICLRSEGSP-LVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKYLAS 151
Query: 192 KADPPVIYRDLKAGNILLGKGFHPKLSDFGLAK--FGPTGDKSHVSTRVMGTHGYCAPEY 249
K ++RDL A N +L + F K++DFGLA+ + H T + A E
Sbjct: 152 KK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 208
Query: 250 ATTGKLTAKSDIFSFGVVLLELIT-GRPAMDD 280
T K T KSD++SFGV+L EL+T G P D
Sbjct: 209 LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD 240
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 104/207 (50%), Gaps = 17/207 (8%)
Query: 80 LGQGGFGAVYKGKLA-----ETGQVVAVKQLDDTGFQGEK-EFLVEVLMLSLMRHPNLVH 133
LGQG FG VY+G E VA+K +++ E+ EFL E ++ ++V
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 86
Query: 134 LIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMK------PLDWNTRMKIAAGAARGLE 187
L+G ++G L++ E M G L+ +L L PEM+ P + +++A A G+
Sbjct: 87 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 146
Query: 188 YLH-NKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCA 246
YL+ NK ++RDL A N ++ + F K+ DFG+ + D + + + +
Sbjct: 147 YLNANK----FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 202
Query: 247 PEYATTGKLTAKSDIFSFGVVLLELIT 273
PE G T SD++SFGVVL E+ T
Sbjct: 203 PESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 88.2 bits (217), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 100/204 (49%), Gaps = 11/204 (5%)
Query: 74 FKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLD-DTGFQGEKEFLVEVLMLSLMRHPNLV 132
F +G+G FG V+KG T +VVA+K +D + ++ E+ +LS P +
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 83
Query: 133 HLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNK 192
G + T+ ++ EY+ GS D L E PLD I +GL+YLH++
Sbjct: 84 KYYGSYLKDTKLWIIMEYLGGGSALDLL-----EPGPLDETQIATILREILKGLDYLHSE 138
Query: 193 ADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATT 252
I+RD+KA N+LL + KL+DFG+A G D +GT + APE
Sbjct: 139 KK---IHRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNXFVGTPFWMAPEVIKQ 193
Query: 253 GKLTAKSDIFSFGVVLLELITGRP 276
+K+DI+S G+ +EL G P
Sbjct: 194 SAYDSKADIWSLGITAIELARGEP 217
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 88.2 bits (217), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/212 (35%), Positives = 112/212 (52%), Gaps = 20/212 (9%)
Query: 80 LGQGGFGAVYKGKLAET-GQVV--AVKQLDDTGFQGE-KEFLVEVLMLSLMRHPNLVHLI 135
+G+G FG VY G L + G+ + AVK L+ GE +FL E +++ HPN++ L+
Sbjct: 33 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 92
Query: 136 GYC--AEGTQRLLVYEYMPLGSLEDHLLGLT--PEMKPLDWNTRMKIAAGAARGLEYLHN 191
G C +EG+ L+V YM G L + + T P +K L + A+G++YL +
Sbjct: 93 GICLRSEGSP-LVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKYLAS 146
Query: 192 KADPPVIYRDLKAGNILLGKGFHPKLSDFGLAK--FGPTGDKSHVSTRVMGTHGYCAPEY 249
K ++RDL A N +L + F K++DFGLA+ + H T + A E
Sbjct: 147 KK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 203
Query: 250 ATTGKLTAKSDIFSFGVVLLELIT-GRPAMDD 280
T K T KSD++SFGV+L EL+T G P D
Sbjct: 204 LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD 235
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/212 (35%), Positives = 112/212 (52%), Gaps = 20/212 (9%)
Query: 80 LGQGGFGAVYKGKLAET-GQVV--AVKQLDDTGFQGE-KEFLVEVLMLSLMRHPNLVHLI 135
+G+G FG VY G L + G+ + AVK L+ GE +FL E +++ HPN++ L+
Sbjct: 30 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 89
Query: 136 GYC--AEGTQRLLVYEYMPLGSLEDHLLGLT--PEMKPLDWNTRMKIAAGAARGLEYLHN 191
G C +EG+ L+V YM G L + + T P +K L + A+G++YL +
Sbjct: 90 GICLRSEGSP-LVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKYLAS 143
Query: 192 KADPPVIYRDLKAGNILLGKGFHPKLSDFGLAK--FGPTGDKSHVSTRVMGTHGYCAPEY 249
K ++RDL A N +L + F K++DFGLA+ + H T + A E
Sbjct: 144 KK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 200
Query: 250 ATTGKLTAKSDIFSFGVVLLELIT-GRPAMDD 280
T K T KSD++SFGV+L EL+T G P D
Sbjct: 201 LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD 232
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/212 (35%), Positives = 112/212 (52%), Gaps = 20/212 (9%)
Query: 80 LGQGGFGAVYKGKLAET-GQVV--AVKQLDDTGFQGE-KEFLVEVLMLSLMRHPNLVHLI 135
+G+G FG VY G L + G+ + AVK L+ GE +FL E +++ HPN++ L+
Sbjct: 35 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 94
Query: 136 GYC--AEGTQRLLVYEYMPLGSLEDHLLGLT--PEMKPLDWNTRMKIAAGAARGLEYLHN 191
G C +EG+ L+V YM G L + + T P +K L + A+G++YL +
Sbjct: 95 GICLRSEGSP-LVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKYLAS 148
Query: 192 KADPPVIYRDLKAGNILLGKGFHPKLSDFGLAK--FGPTGDKSHVSTRVMGTHGYCAPEY 249
K ++RDL A N +L + F K++DFGLA+ + H T + A E
Sbjct: 149 KK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 205
Query: 250 ATTGKLTAKSDIFSFGVVLLELIT-GRPAMDD 280
T K T KSD++SFGV+L EL+T G P D
Sbjct: 206 LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD 237
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 108/209 (51%), Gaps = 18/209 (8%)
Query: 73 NFKDTNFLGQGGFGAVYKGKLAETGQVV----AVKQLDD-TGFQGEKEFLVEVLMLSLMR 127
FK LG G FG VYKG G+ V A+K+L + T + KE L E +++ +
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 76
Query: 128 HPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKP---LDWNTRMKIAAGAAR 184
+P++ L+G C T +L++ + MP G L D++ + L+W ++ A+
Sbjct: 77 NPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 129
Query: 185 GLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGY 244
G+ YL ++ +++RDL A N+L+ H K++DFGLAK +K + + +
Sbjct: 130 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 186
Query: 245 CAPEYATTGKLTAKSDIFSFGVVLLELIT 273
A E T +SD++S+GV + EL+T
Sbjct: 187 MALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/212 (35%), Positives = 112/212 (52%), Gaps = 20/212 (9%)
Query: 80 LGQGGFGAVYKGKLAET-GQVV--AVKQLDDTGFQGE-KEFLVEVLMLSLMRHPNLVHLI 135
+G+G FG VY G L + G+ + AVK L+ GE +FL E +++ HPN++ L+
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 96
Query: 136 GYC--AEGTQRLLVYEYMPLGSLEDHLLGLT--PEMKPLDWNTRMKIAAGAARGLEYLHN 191
G C +EG+ L+V YM G L + + T P +K L + A+G++YL +
Sbjct: 97 GICLRSEGSP-LVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKYLAS 150
Query: 192 KADPPVIYRDLKAGNILLGKGFHPKLSDFGLAK--FGPTGDKSHVSTRVMGTHGYCAPEY 249
K ++RDL A N +L + F K++DFGLA+ + H T + A E
Sbjct: 151 KK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 207
Query: 250 ATTGKLTAKSDIFSFGVVLLELIT-GRPAMDD 280
T K T KSD++SFGV+L EL+T G P D
Sbjct: 208 LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD 239
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 100/204 (49%), Gaps = 11/204 (5%)
Query: 74 FKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLD-DTGFQGEKEFLVEVLMLSLMRHPNLV 132
F +G+G FG V+KG T +VVA+K +D + ++ E+ +LS P +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 133 HLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNK 192
G + T+ ++ EY+ GS D L E PLD I +GL+YLH++
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGSALDLL-----EPGPLDETQIATILREILKGLDYLHSE 123
Query: 193 ADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATT 252
I+RD+KA N+LL + KL+DFG+A G D +GT + APE
Sbjct: 124 KK---IHRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNXFVGTPFWMAPEVIKQ 178
Query: 253 GKLTAKSDIFSFGVVLLELITGRP 276
+K+DI+S G+ +EL G P
Sbjct: 179 SAYDSKADIWSLGITAIELARGEP 202
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/212 (35%), Positives = 112/212 (52%), Gaps = 20/212 (9%)
Query: 80 LGQGGFGAVYKGKLAET-GQVV--AVKQLDDTGFQGE-KEFLVEVLMLSLMRHPNLVHLI 135
+G+G FG VY G L + G+ + AVK L+ GE +FL E +++ HPN++ L+
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 136 GYC--AEGTQRLLVYEYMPLGSLEDHLLGLT--PEMKPLDWNTRMKIAAGAARGLEYLHN 191
G C +EG+ L+V YM G L + + T P +K L + A+G++YL +
Sbjct: 98 GICLRSEGSP-LVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKYLAS 151
Query: 192 KADPPVIYRDLKAGNILLGKGFHPKLSDFGLAK--FGPTGDKSHVSTRVMGTHGYCAPEY 249
K ++RDL A N +L + F K++DFGLA+ + H T + A E
Sbjct: 152 KK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 208
Query: 250 ATTGKLTAKSDIFSFGVVLLELIT-GRPAMDD 280
T K T KSD++SFGV+L EL+T G P D
Sbjct: 209 LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD 240
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 108/209 (51%), Gaps = 18/209 (8%)
Query: 73 NFKDTNFLGQGGFGAVYKGKLAETGQVV----AVKQLDD-TGFQGEKEFLVEVLMLSLMR 127
FK LG G FG VYKG G+ V A+K+L + T + KE L E +++ +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 128 HPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKP---LDWNTRMKIAAGAAR 184
+P++ L+G C T +L++ + MP G L D++ + L+W ++ A+
Sbjct: 76 NPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 128
Query: 185 GLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGY 244
G+ YL ++ +++RDL A N+L+ H K++DFGLAK +K + + +
Sbjct: 129 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 185
Query: 245 CAPEYATTGKLTAKSDIFSFGVVLLELIT 273
A E T +SD++S+GV + EL+T
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 100/204 (49%), Gaps = 11/204 (5%)
Query: 74 FKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLD-DTGFQGEKEFLVEVLMLSLMRHPNLV 132
F +G+G FG V+KG T +VVA+K +D + ++ E+ +LS P +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 133 HLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNK 192
G + T+ ++ EY+ GS D L E PLD I +GL+YLH++
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGSALDLL-----EPGPLDETQIATILREILKGLDYLHSE 123
Query: 193 ADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATT 252
I+RD+KA N+LL + KL+DFG+A G D +GT + APE
Sbjct: 124 KK---IHRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNTFVGTPFWMAPEVIKQ 178
Query: 253 GKLTAKSDIFSFGVVLLELITGRP 276
+K+DI+S G+ +EL G P
Sbjct: 179 SAYDSKADIWSLGITAIELARGEP 202
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 107/215 (49%), Gaps = 17/215 (7%)
Query: 75 KDTNFLGQGGFGAVYKGKLAETGQ---VVAVKQLDDTGF--QGEKEFLVEVLMLSLMRHP 129
K +G G FG V G L G+ VA+K L +G+ + ++FL E ++ HP
Sbjct: 10 KIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLK-SGYTEKQRRDFLSEASIMGQFDHP 68
Query: 130 NLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYL 189
N++HL G + T +++ E+M GSL+ L + + ++ G A G++YL
Sbjct: 69 NVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLR---GIAAGMKYL 125
Query: 190 HNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTH---GYCA 246
AD ++R L A NIL+ K+SDFGL++F T +G + A
Sbjct: 126 ---ADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTA 182
Query: 247 PEYATTGKLTAKSDIFSFGVVLLELIT--GRPAMD 279
PE K T+ SD++S+G+V+ E+++ RP D
Sbjct: 183 PEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWD 217
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/212 (35%), Positives = 112/212 (52%), Gaps = 20/212 (9%)
Query: 80 LGQGGFGAVYKGKLAET-GQVV--AVKQLDDTGFQGE-KEFLVEVLMLSLMRHPNLVHLI 135
+G+G FG VY G L + G+ + AVK L+ GE +FL E +++ HPN++ L+
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 95
Query: 136 GYC--AEGTQRLLVYEYMPLGSLEDHLLGLT--PEMKPLDWNTRMKIAAGAARGLEYLHN 191
G C +EG+ L+V YM G L + + T P +K L + A+G++YL +
Sbjct: 96 GICLRSEGSP-LVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKYLAS 149
Query: 192 KADPPVIYRDLKAGNILLGKGFHPKLSDFGLAK--FGPTGDKSHVSTRVMGTHGYCAPEY 249
K ++RDL A N +L + F K++DFGLA+ + H T + A E
Sbjct: 150 KK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 206
Query: 250 ATTGKLTAKSDIFSFGVVLLELIT-GRPAMDD 280
T K T KSD++SFGV+L EL+T G P D
Sbjct: 207 LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD 238
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 108/209 (51%), Gaps = 18/209 (8%)
Query: 73 NFKDTNFLGQGGFGAVYKGKLAETGQVV----AVKQLDD-TGFQGEKEFLVEVLMLSLMR 127
FK LG G FG VYKG G+ V A+K+L + T + KE L E +++ +
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 79
Query: 128 HPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKP---LDWNTRMKIAAGAAR 184
+P++ L+G C T +L++ + MP G L D++ + L+W ++ A+
Sbjct: 80 NPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 132
Query: 185 GLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGY 244
G+ YL ++ +++RDL A N+L+ H K++DFGLAK +K + + +
Sbjct: 133 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 189
Query: 245 CAPEYATTGKLTAKSDIFSFGVVLLELIT 273
A E T +SD++S+GV + EL+T
Sbjct: 190 MALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 101/208 (48%), Gaps = 11/208 (5%)
Query: 74 FKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLD-DTGFQGEKEFLVEVLMLSLMRHPNLV 132
F + +G+G FG VYKG T +VVA+K +D + ++ E+ +LS P +
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYIT 80
Query: 133 HLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNK 192
G + T+ ++ EY+ GS D L + PL+ I +GL+YLH++
Sbjct: 81 RYFGSYLKSTKLWIIMEYLGGGSALDLL-----KPGPLEETYIATILREILKGLDYLHSE 135
Query: 193 ADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATT 252
I+RD+KA N+LL + KL+DFG+A G D +GT + APE
Sbjct: 136 RK---IHRDIKAANVLLSEQGDVKLADFGVA--GQLTDTQIKRNXFVGTPFWMAPEVIKQ 190
Query: 253 GKLTAKSDIFSFGVVLLELITGRPAMDD 280
K+DI+S G+ +EL G P D
Sbjct: 191 SAYDFKADIWSLGITAIELAKGEPPNSD 218
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 98/194 (50%), Gaps = 9/194 (4%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLVHLIGYCA 139
+G G FG V+ G +V A+K + + G E++F+ E ++ + HP LV L G C
Sbjct: 16 IGSGQFGLVHLGYWLNKDKV-AIKTIRE-GAMSEEDFIEEAEVMMKLSHPKLVQLYGVCL 73
Query: 140 EGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIY 199
E LV E+M G L D+ L + T + + G+ YL VI+
Sbjct: 74 EQAPICLVTEFMEHGCLSDY---LRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIH 127
Query: 200 RDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTGKLTAKS 259
RDL A N L+G+ K+SDFG+ +F D+ ST + +PE + + ++KS
Sbjct: 128 RDLAARNCLVGENQVIKVSDFGMTRF-VLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 186
Query: 260 DIFSFGVVLLELIT 273
D++SFGV++ E+ +
Sbjct: 187 DVWSFGVLMWEVFS 200
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 104/207 (50%), Gaps = 17/207 (8%)
Query: 80 LGQGGFGAVYKGKLA-----ETGQVVAVKQLDDTGFQGEK-EFLVEVLMLSLMRHPNLVH 133
LGQG FG VY+G E VA+K +++ E+ EFL E ++ ++V
Sbjct: 55 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 114
Query: 134 LIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMK------PLDWNTRMKIAAGAARGLE 187
L+G ++G L++ E M G L+ +L L PEM+ P + +++A A G+
Sbjct: 115 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 174
Query: 188 YLH-NKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCA 246
YL+ NK ++RDL A N ++ + F K+ DFG+ + D + + + +
Sbjct: 175 YLNANK----FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 230
Query: 247 PEYATTGKLTAKSDIFSFGVVLLELIT 273
PE G T SD++SFGVVL E+ T
Sbjct: 231 PESLKDGVFTTYSDVWSFGVVLWEIAT 257
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 108/209 (51%), Gaps = 18/209 (8%)
Query: 73 NFKDTNFLGQGGFGAVYKGKLAETGQVV----AVKQLDD-TGFQGEKEFLVEVLMLSLMR 127
FK LG G FG VYKG G+ V A+K+L + T + KE L E +++ +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 128 HPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKP---LDWNTRMKIAAGAAR 184
+P++ L+G C T +L++ + MP G L D++ + L+W ++ A+
Sbjct: 78 NPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 130
Query: 185 GLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGY 244
G+ YL ++ +++RDL A N+L+ H K++DFGLAK +K + + +
Sbjct: 131 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 187
Query: 245 CAPEYATTGKLTAKSDIFSFGVVLLELIT 273
A E T +SD++S+GV + EL+T
Sbjct: 188 MALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 108/209 (51%), Gaps = 18/209 (8%)
Query: 73 NFKDTNFLGQGGFGAVYKGKLAETGQVV----AVKQLDD-TGFQGEKEFLVEVLMLSLMR 127
FK LG G FG VYKG G+ V A+K+L + T + KE L E +++ +
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 76
Query: 128 HPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKP---LDWNTRMKIAAGAAR 184
+P++ L+G C T +L++ + MP G L D++ + L+W ++ A+
Sbjct: 77 NPHVCRLLGICLTSTVQLIM-QLMPFGXLLDYVREHKDNIGSQYLLNWCVQI------AK 129
Query: 185 GLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGY 244
G+ YL ++ +++RDL A N+L+ H K++DFGLAK +K + + +
Sbjct: 130 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 186
Query: 245 CAPEYATTGKLTAKSDIFSFGVVLLELIT 273
A E T +SD++S+GV + EL+T
Sbjct: 187 MALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 108/209 (51%), Gaps = 18/209 (8%)
Query: 73 NFKDTNFLGQGGFGAVYKGKLAETGQVV----AVKQLDD-TGFQGEKEFLVEVLMLSLMR 127
FK LG G FG VYKG G+ V A+K+L + T + KE L E +++ +
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 128 HPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKP---LDWNTRMKIAAGAAR 184
+P++ L+G C T +L++ + MP G L D++ + L+W ++ A+
Sbjct: 79 NPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 131
Query: 185 GLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGY 244
G+ YL ++ +++RDL A N+L+ H K++DFGLAK +K + + +
Sbjct: 132 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 188
Query: 245 CAPEYATTGKLTAKSDIFSFGVVLLELIT 273
A E T +SD++S+GV + EL+T
Sbjct: 189 MALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 107/209 (51%), Gaps = 18/209 (8%)
Query: 73 NFKDTNFLGQGGFGAVYKGKLAETGQVV----AVKQLDD-TGFQGEKEFLVEVLMLSLMR 127
FK LG G FG VYKG G+ V A+K+L + T + KE L E +++ +
Sbjct: 26 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 85
Query: 128 HPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKP---LDWNTRMKIAAGAAR 184
+P++ L+G C T +L+ + MP G L D++ + L+W ++ A+
Sbjct: 86 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 138
Query: 185 GLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGY 244
G+ YL ++ +++RDL A N+L+ H K++DFGLAK +K + + +
Sbjct: 139 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 195
Query: 245 CAPEYATTGKLTAKSDIFSFGVVLLELIT 273
A E T +SD++S+GV + EL+T
Sbjct: 196 MALESILHRIYTHQSDVWSYGVTVWELMT 224
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 107/220 (48%), Gaps = 16/220 (7%)
Query: 79 FLGQGGFGAVYKGKLAE---TGQVVAVK--QLDDTGFQGEKEFLVEVLMLSLMRHPNLVH 133
LG+G FG+V +G L + T VAVK +LD++ + +EFL E + HPN++
Sbjct: 41 ILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIR 100
Query: 134 LIGYCAEGTQR-----LLVYEYMPLGSLEDHLLGLTPEMKP--LDWNTRMKIAAGAARGL 186
L+G C E + + +++ +M G L +LL E P + T +K A G+
Sbjct: 101 LLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGM 160
Query: 187 EYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCA 246
EYL N+ ++RDL A N +L ++DFGL+K +GD + A
Sbjct: 161 EYLSNRN---FLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIA 217
Query: 247 PEYATTGKLTAKSDIFSFGVVLLELIT-GRPAMDDSQGHE 285
E T+KSD+++FGV + E+ T G Q HE
Sbjct: 218 IESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHE 257
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 107/209 (51%), Gaps = 18/209 (8%)
Query: 73 NFKDTNFLGQGGFGAVYKGKLAETGQVV----AVKQLDD-TGFQGEKEFLVEVLMLSLMR 127
FK LG G FG VYKG G+ V A+K+L + T + KE L E +++ +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 128 HPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKP---LDWNTRMKIAAGAAR 184
+P++ L+G C T +L+ + MP G L D++ + L+W ++ A+
Sbjct: 76 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 128
Query: 185 GLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGY 244
G+ YL ++ +++RDL A N+L+ H K++DFGLAK +K + + +
Sbjct: 129 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 185
Query: 245 CAPEYATTGKLTAKSDIFSFGVVLLELIT 273
A E T +SD++S+GV + EL+T
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 114/229 (49%), Gaps = 25/229 (10%)
Query: 73 NFKDTNFLGQGGFGAVYKGKLAETGQVV----AVKQLDD-TGFQGEKEFLVEVLMLSLMR 127
FK LG G FG VYKG G+ V A+K+L + T + KE L E +++ +
Sbjct: 10 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 69
Query: 128 HPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKP---LDWNTRMKIAAGAAR 184
+P++ L+G C T +L+ + MP G L D++ + L+W ++ A+
Sbjct: 70 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 122
Query: 185 GLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGY 244
G+ YL ++ +++RDL A N+L+ H K++DFGLAK +K + + +
Sbjct: 123 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 179
Query: 245 CAPEYATTGKLTAKSDIFSFGVVLLELIT-------GRPAMDDSQGHER 286
A E T +SD++S+GV + EL+T G PA + S E+
Sbjct: 180 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEK 228
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 107/209 (51%), Gaps = 18/209 (8%)
Query: 73 NFKDTNFLGQGGFGAVYKGKLAETGQVV----AVKQLDD-TGFQGEKEFLVEVLMLSLMR 127
FK LG G FG VYKG G+ V A+K+L + T + KE L E +++ +
Sbjct: 22 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 81
Query: 128 HPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKP---LDWNTRMKIAAGAAR 184
+P++ L+G C T +L+ + MP G L D++ + L+W ++ A+
Sbjct: 82 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 134
Query: 185 GLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGY 244
G+ YL ++ +++RDL A N+L+ H K++DFGLAK +K + + +
Sbjct: 135 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 191
Query: 245 CAPEYATTGKLTAKSDIFSFGVVLLELIT 273
A E T +SD++S+GV + EL+T
Sbjct: 192 MALESILHRIYTHQSDVWSYGVTVWELMT 220
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 107/209 (51%), Gaps = 18/209 (8%)
Query: 73 NFKDTNFLGQGGFGAVYKGKLAETGQVV----AVKQLDD-TGFQGEKEFLVEVLMLSLMR 127
FK LG G FG VYKG G+ V A+K+L + T + KE L E +++ +
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 128 HPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKP---LDWNTRMKIAAGAAR 184
+P++ L+G C T +L+ + MP G L D++ + L+W ++ A+
Sbjct: 79 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 131
Query: 185 GLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGY 244
G+ YL ++ +++RDL A N+L+ H K++DFGLAK +K + + +
Sbjct: 132 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 188
Query: 245 CAPEYATTGKLTAKSDIFSFGVVLLELIT 273
A E T +SD++S+GV + EL+T
Sbjct: 189 MALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 107/209 (51%), Gaps = 18/209 (8%)
Query: 73 NFKDTNFLGQGGFGAVYKGKLAETGQVV----AVKQLDD-TGFQGEKEFLVEVLMLSLMR 127
FK LG G FG VYKG G+ V A+K+L + T + KE L E +++ +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 128 HPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKP---LDWNTRMKIAAGAAR 184
+P++ L+G C T +L+ + MP G L D++ + L+W ++ A+
Sbjct: 78 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 130
Query: 185 GLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGY 244
G+ YL ++ +++RDL A N+L+ H K++DFGLAK +K + + +
Sbjct: 131 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 187
Query: 245 CAPEYATTGKLTAKSDIFSFGVVLLELIT 273
A E T +SD++S+GV + EL+T
Sbjct: 188 MALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 102/206 (49%), Gaps = 15/206 (7%)
Query: 80 LGQGGFGAVYKGKL-----AETGQVVAVKQLDDTGFQGEK-EFLVEVLMLSLMRHPNLVH 133
LGQG FG VY+G E VAVK ++++ E+ EFL E ++ ++V
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 85
Query: 134 LIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMK------PLDWNTRMKIAAGAARGLE 187
L+G ++G L+V E M G L+ +L L PE + P +++AA A G+
Sbjct: 86 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 145
Query: 188 YLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAP 247
YL+ K ++R+L A N ++ F K+ DFG+ + D + + + AP
Sbjct: 146 YLNAKK---FVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 202
Query: 248 EYATTGKLTAKSDIFSFGVVLLELIT 273
E G T SD++SFGVVL E+ +
Sbjct: 203 ESLKDGVFTTSSDMWSFGVVLWEITS 228
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 87.4 bits (215), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 114/229 (49%), Gaps = 25/229 (10%)
Query: 73 NFKDTNFLGQGGFGAVYKGKLAETGQVV----AVKQLDD-TGFQGEKEFLVEVLMLSLMR 127
FK LG G FG VYKG G+ V A+K+L + T + KE L E +++ +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 128 HPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKP---LDWNTRMKIAAGAAR 184
+P++ L+G C T +L+ + MP G L D++ + L+W ++ A+
Sbjct: 76 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 128
Query: 185 GLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGY 244
G+ YL ++ +++RDL A N+L+ H K++DFGLAK +K + + +
Sbjct: 129 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 185
Query: 245 CAPEYATTGKLTAKSDIFSFGVVLLELIT-------GRPAMDDSQGHER 286
A E T +SD++S+GV + EL+T G PA + S E+
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEK 234
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 87.4 bits (215), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 107/209 (51%), Gaps = 18/209 (8%)
Query: 73 NFKDTNFLGQGGFGAVYKGKLAETGQVV----AVKQLDD-TGFQGEKEFLVEVLMLSLMR 127
FK LG G FG VYKG G+ V A+K+L + T + KE L E +++ +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 128 HPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKP---LDWNTRMKIAAGAAR 184
+P++ L+G C T +L+ + MP G L D++ + L+W ++ A+
Sbjct: 76 NPHVCRLLGICLTSTVQLIT-QLMPFGXLLDYVREHKDNIGSQYLLNWCVQI------AK 128
Query: 185 GLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGY 244
G+ YL ++ +++RDL A N+L+ H K++DFGLAK +K + + +
Sbjct: 129 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 185
Query: 245 CAPEYATTGKLTAKSDIFSFGVVLLELIT 273
A E T +SD++S+GV + EL+T
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 87.4 bits (215), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 102/206 (49%), Gaps = 15/206 (7%)
Query: 80 LGQGGFGAVYKGKL-----AETGQVVAVKQLDDTGFQGEK-EFLVEVLMLSLMRHPNLVH 133
LGQG FG VY+G E VAVK ++++ E+ EFL E ++ ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 134 LIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMK------PLDWNTRMKIAAGAARGLE 187
L+G ++G L+V E M G L+ +L L PE + P +++AA A G+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 188 YLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAP 247
YL+ K ++R+L A N ++ F K+ DFG+ + D + + + AP
Sbjct: 145 YLNAKK---FVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 201
Query: 248 EYATTGKLTAKSDIFSFGVVLLELIT 273
E G T SD++SFGVVL E+ +
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 87.4 bits (215), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 107/209 (51%), Gaps = 18/209 (8%)
Query: 73 NFKDTNFLGQGGFGAVYKGKLAETGQVV----AVKQLDD-TGFQGEKEFLVEVLMLSLMR 127
FK LG G FG VYKG G+ V A+K+L + T + KE L E +++ +
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 128 HPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKP---LDWNTRMKIAAGAAR 184
+P++ L+G C T +L+ + MP G L D++ + L+W ++ A+
Sbjct: 79 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 131
Query: 185 GLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGY 244
G+ YL ++ +++RDL A N+L+ H K++DFGLAK +K + + +
Sbjct: 132 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 188
Query: 245 CAPEYATTGKLTAKSDIFSFGVVLLELIT 273
A E T +SD++S+GV + EL+T
Sbjct: 189 MALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 87.4 bits (215), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 107/209 (51%), Gaps = 18/209 (8%)
Query: 73 NFKDTNFLGQGGFGAVYKGKLAETGQVV----AVKQLDD-TGFQGEKEFLVEVLMLSLMR 127
FK LG G FG VYKG G+ V A+K+L + T + KE L E +++ +
Sbjct: 41 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 100
Query: 128 HPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKP---LDWNTRMKIAAGAAR 184
+P++ L+G C T +L+ + MP G L D++ + L+W ++ A+
Sbjct: 101 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 153
Query: 185 GLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGY 244
G+ YL ++ +++RDL A N+L+ H K++DFGLAK +K + + +
Sbjct: 154 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 210
Query: 245 CAPEYATTGKLTAKSDIFSFGVVLLELIT 273
A E T +SD++S+GV + EL+T
Sbjct: 211 MALESILHRIYTHQSDVWSYGVTVWELMT 239
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 87.4 bits (215), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 107/209 (51%), Gaps = 18/209 (8%)
Query: 73 NFKDTNFLGQGGFGAVYKGKLAETGQVV----AVKQLDD-TGFQGEKEFLVEVLMLSLMR 127
FK LG G FG VYKG G+ V A+K+L + T + KE L E +++ +
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 128 HPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKP---LDWNTRMKIAAGAAR 184
+P++ L+G C T +L+ + MP G L D++ + L+W ++ A+
Sbjct: 79 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 131
Query: 185 GLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGY 244
G+ YL ++ +++RDL A N+L+ H K++DFGLAK +K + + +
Sbjct: 132 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 188
Query: 245 CAPEYATTGKLTAKSDIFSFGVVLLELIT 273
A E T +SD++S+GV + EL+T
Sbjct: 189 MALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 87.4 bits (215), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 105/228 (46%), Gaps = 29/228 (12%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKLA-----ETGQVVAVKQL-DDTGFQGEKEFLVEVLMLSL 125
+N + +G+G FG V++ + E +VAVK L ++ + +F E +++
Sbjct: 47 NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAE 106
Query: 126 MRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEM------------------ 167
+PN+V L+G CA G L++EYM G L + L ++P
Sbjct: 107 FDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSP 166
Query: 168 --KPLDWNTRMKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKF 225
PL ++ IA A G+ YL + ++RDL N L+G+ K++DFGL++
Sbjct: 167 GPPPLSCAEQLCIARQVAAGMAYLSERK---FVHRDLATRNCLVGENMVVKIADFGLSRN 223
Query: 226 GPTGDKSHVSTRVMGTHGYCAPEYATTGKLTAKSDIFSFGVVLLELIT 273
+ D + PE + T +SD++++GVVL E+ +
Sbjct: 224 IYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS 271
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 107/209 (51%), Gaps = 18/209 (8%)
Query: 73 NFKDTNFLGQGGFGAVYKGKLAETGQVV----AVKQLDD-TGFQGEKEFLVEVLMLSLMR 127
FK LG G FG VYKG G+ V A+K+L + T + KE L E +++ +
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 128 HPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKP---LDWNTRMKIAAGAAR 184
+P++ L+G C T +L+ + MP G L D++ + L+W ++ A+
Sbjct: 83 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 135
Query: 185 GLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGY 244
G+ YL ++ +++RDL A N+L+ H K++DFGLAK +K + + +
Sbjct: 136 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 192
Query: 245 CAPEYATTGKLTAKSDIFSFGVVLLELIT 273
A E T +SD++S+GV + EL+T
Sbjct: 193 MALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 110/225 (48%), Gaps = 36/225 (16%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKLAETGQVV--AVKQL-------DDTGFQGEKEFLVEVLM 122
++ K + +G+G FG V K ++ + G + A+K++ D F GE E L +
Sbjct: 15 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCK--- 71
Query: 123 LSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHL-----LGLTPEM-------KPL 170
L HPN+++L+G C L EY P G+L D L L P L
Sbjct: 72 --LGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTL 129
Query: 171 DWNTRMKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGD 230
+ AA ARG++YL K I+RDL A NIL+G+ + K++DFGL++ G
Sbjct: 130 SSQQLLHFAADVARGMDYLSQKQ---FIHRDLAARNILVGENYVAKIADFGLSR----GQ 182
Query: 231 KSHVSTRVMGTH--GYCAPEYATTGKLTAKSDIFSFGVVLLELIT 273
+ +V + MG + A E T SD++S+GV+L E+++
Sbjct: 183 EVYVK-KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 117/238 (49%), Gaps = 19/238 (7%)
Query: 53 HENKNKENTFTYRQLVAATDNFKDTNFLGQGGFGAVYKGKLAETGQ---VVAVKQLDDTG 109
+E+ N+ ++L A+ K +G G FG V G+L G+ VA+K L G
Sbjct: 26 YEDPNRAVHQFAKELDASC--IKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLK-VG 82
Query: 110 F--QGEKEFLVEVLMLSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEM 167
+ + ++FL E ++ HPN+VHL G G ++V E+M G+L+ L +
Sbjct: 83 YTEKQRRDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQF 142
Query: 168 KPLDWNTRMKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGP 227
+ ++ G A G+ YL AD ++RDL A NIL+ K+SDFGL++
Sbjct: 143 TVIQLVGMLR---GIAAGMRYL---ADMGYVHRDLAARNILVNSNLVCKVSDFGLSRV-I 195
Query: 228 TGDKSHVSTRVMGT--HGYCAPEYATTGKLTAKSDIFSFGVVLLELIT--GRPAMDDS 281
D V T G + APE K T+ SD++S+G+V+ E+++ RP D S
Sbjct: 196 EDDPEAVYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMS 253
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 110/225 (48%), Gaps = 36/225 (16%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKLAETGQVV--AVKQL-------DDTGFQGEKEFLVEVLM 122
++ K + +G+G FG V K ++ + G + A+K++ D F GE E L +
Sbjct: 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCK--- 81
Query: 123 LSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHL-----LGLTPEM-------KPL 170
L HPN+++L+G C L EY P G+L D L L P L
Sbjct: 82 --LGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTL 139
Query: 171 DWNTRMKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGD 230
+ AA ARG++YL K I+RDL A NIL+G+ + K++DFGL++ G
Sbjct: 140 SSQQLLHFAADVARGMDYLSQKQ---FIHRDLAARNILVGENYVAKIADFGLSR----GQ 192
Query: 231 KSHVSTRVMGTH--GYCAPEYATTGKLTAKSDIFSFGVVLLELIT 273
+ +V + MG + A E T SD++S+GV+L E+++
Sbjct: 193 EVYVK-KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 103/207 (49%), Gaps = 17/207 (8%)
Query: 80 LGQGGFGAVYKGKLA-----ETGQVVAVKQLDDTGFQGEK-EFLVEVLMLSLMRHPNLVH 133
LGQG FG VY+G E VA+K +++ E+ EFL E ++ ++V
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 79
Query: 134 LIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMK------PLDWNTRMKIAAGAARGLE 187
L+G ++G L++ E M G L+ +L L PEM+ P + +++A A G+
Sbjct: 80 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 139
Query: 188 YLH-NKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCA 246
YL+ NK ++RDL A N + + F K+ DFG+ + D + + + +
Sbjct: 140 YLNANK----FVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 195
Query: 247 PEYATTGKLTAKSDIFSFGVVLLELIT 273
PE G T SD++SFGVVL E+ T
Sbjct: 196 PESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 106/209 (50%), Gaps = 18/209 (8%)
Query: 73 NFKDTNFLGQGGFGAVYKGKLAETGQVV----AVKQLDD-TGFQGEKEFLVEVLMLSLMR 127
FK LG G FG VYKG G+ V A+K+L + T + KE L E +++ +
Sbjct: 13 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 72
Query: 128 HPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKP---LDWNTRMKIAAGAAR 184
+P++ L+G C T +L+ + MP G L D++ + L+W ++ A
Sbjct: 73 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AE 125
Query: 185 GLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGY 244
G+ YL ++ +++RDL A N+L+ H K++DFGLAK +K + + +
Sbjct: 126 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 182
Query: 245 CAPEYATTGKLTAKSDIFSFGVVLLELIT 273
A E T +SD++S+GV + EL+T
Sbjct: 183 MALESILHRIYTHQSDVWSYGVTVWELMT 211
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 99/202 (49%), Gaps = 13/202 (6%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLVHLIGYCA 139
LG G FG VYK + ET + A K +D + ++++VE+ +L+ HPN+V L+
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 140 EGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIY 199
++ E+ G+++ +L L +PL + + L YLH D +I+
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELE---RPLTESQIQVVCKQTLDALNYLH---DNKIIH 158
Query: 200 RDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYAT--TGK--- 254
RDLKAGNIL KL+DFG++ + S +GT + APE T K
Sbjct: 159 RDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDS--FIGTPYWMAPEVVMCETSKDRP 216
Query: 255 LTAKSDIFSFGVVLLELITGRP 276
K+D++S G+ L+E+ P
Sbjct: 217 YDYKADVWSLGITLIEMAEIEP 238
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 99/202 (49%), Gaps = 13/202 (6%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLVHLIGYCA 139
LG G FG VYK + ET + A K +D + ++++VE+ +L+ HPN+V L+
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 140 EGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIY 199
++ E+ G+++ +L L +PL + + L YLH D +I+
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELE---RPLTESQIQVVCKQTLDALNYLH---DNKIIH 158
Query: 200 RDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYAT--TGK--- 254
RDLKAGNIL KL+DFG++ + S +GT + APE T K
Sbjct: 159 RDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDS--FIGTPYWMAPEVVMCETSKDRP 216
Query: 255 LTAKSDIFSFGVVLLELITGRP 276
K+D++S G+ L+E+ P
Sbjct: 217 YDYKADVWSLGITLIEMAEIEP 238
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 107/209 (51%), Gaps = 18/209 (8%)
Query: 73 NFKDTNFLGQGGFGAVYKGKLAETGQVV----AVKQLDD-TGFQGEKEFLVEVLMLSLMR 127
FK LG G FG VYKG G+ V A+K+L + T + KE L E +++ +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 128 HPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKP---LDWNTRMKIAAGAAR 184
+P++ L+G C T +L++ + MP G L D++ + L+W ++ A+
Sbjct: 78 NPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 130
Query: 185 GLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGY 244
G+ YL ++ +++RDL A N+L+ H K++DFG AK +K + + +
Sbjct: 131 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKW 187
Query: 245 CAPEYATTGKLTAKSDIFSFGVVLLELIT 273
A E T +SD++S+GV + EL+T
Sbjct: 188 MALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 107/209 (51%), Gaps = 18/209 (8%)
Query: 73 NFKDTNFLGQGGFGAVYKGKLAETGQVV----AVKQLDD-TGFQGEKEFLVEVLMLSLMR 127
FK LG G FG VYKG G+ V A+K+L + T + KE L E +++ +
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 79
Query: 128 HPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKP---LDWNTRMKIAAGAAR 184
+P++ L+G C T +L++ + MP G L D++ + L+W ++ A+
Sbjct: 80 NPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 132
Query: 185 GLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGY 244
G+ YL ++ +++RDL A N+L+ H K++DFG AK +K + + +
Sbjct: 133 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKW 189
Query: 245 CAPEYATTGKLTAKSDIFSFGVVLLELIT 273
A E T +SD++S+GV + EL+T
Sbjct: 190 MALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 107/209 (51%), Gaps = 18/209 (8%)
Query: 73 NFKDTNFLGQGGFGAVYKGKLAETGQVV----AVKQLDD-TGFQGEKEFLVEVLMLSLMR 127
FK L G FG VYKG G+ V A+K+L + T + KE L E +++ +
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 128 HPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKP---LDWNTRMKIAAGAAR 184
+P++ L+G C T +L++ + MP G L D++ + L+W ++ A+
Sbjct: 83 NPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 135
Query: 185 GLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGY 244
G+ YL ++ +++RDL A N+L+ H K++DFGLAK +K + + +
Sbjct: 136 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 192
Query: 245 CAPEYATTGKLTAKSDIFSFGVVLLELIT 273
A E T +SD++S+GV + EL+T
Sbjct: 193 MALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 106/209 (50%), Gaps = 18/209 (8%)
Query: 73 NFKDTNFLGQGGFGAVYKGKLAETGQVV----AVKQLDD-TGFQGEKEFLVEVLMLSLMR 127
FK L G FG VYKG G+ V A+K+L + T + KE L E +++ +
Sbjct: 16 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 128 HPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKP---LDWNTRMKIAAGAAR 184
+P++ L+G C T +L+ + MP G L D++ + L+W ++ A+
Sbjct: 76 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 128
Query: 185 GLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGY 244
G+ YL ++ +++RDL A N+L+ H K++DFGLAK +K + + +
Sbjct: 129 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 185
Query: 245 CAPEYATTGKLTAKSDIFSFGVVLLELIT 273
A E T +SD++S+GV + EL+T
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 102/207 (49%), Gaps = 17/207 (8%)
Query: 80 LGQGGFGAVYKGKLA-----ETGQVVAVKQLDDTGFQGEK-EFLVEVLMLSLMRHPNLVH 133
LGQG FG VY+G E VA+K +++ E+ EFL E ++ ++V
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 92
Query: 134 LIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEM------KPLDWNTRMKIAAGAARGLE 187
L+G ++G L++ E M G L+ +L L P M P + +++A A G+
Sbjct: 93 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMA 152
Query: 188 YLH-NKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCA 246
YL+ NK ++RDL A N ++ + F K+ DFG+ + D + + + +
Sbjct: 153 YLNANK----FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 208
Query: 247 PEYATTGKLTAKSDIFSFGVVLLELIT 273
PE G T SD++SFGVVL E+ T
Sbjct: 209 PESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 107/209 (51%), Gaps = 18/209 (8%)
Query: 73 NFKDTNFLGQGGFGAVYKGKLAETGQVV----AVKQLDD-TGFQGEKEFLVEVLMLSLMR 127
FK LG G FG VYKG G+ V A+K+L + T + KE L E +++ +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 128 HPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKP---LDWNTRMKIAAGAAR 184
+P++ L+G C T +L++ + MP G L D++ + L+W ++ A+
Sbjct: 78 NPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 130
Query: 185 GLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGY 244
G+ YL ++ +++RDL A N+L+ H K++DFG AK +K + + +
Sbjct: 131 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKW 187
Query: 245 CAPEYATTGKLTAKSDIFSFGVVLLELIT 273
A E T +SD++S+GV + EL+T
Sbjct: 188 MALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 105/217 (48%), Gaps = 17/217 (7%)
Query: 75 KDTNFLGQGGFGAVYKGKLAETGQ---VVAVKQLDDTGF--QGEKEFLVEVLMLSLMRHP 129
K +G G FG V +G+L G+ VA+K L G+ + +EFL E ++ HP
Sbjct: 19 KIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKG-GYTERQRREFLSEASIMGQFEHP 77
Query: 130 NLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYL 189
N++ L G +++ E+M G+L+ L + + ++ G A G+ YL
Sbjct: 78 NIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLR---GIASGMRYL 134
Query: 190 HNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTH---GYCA 246
A+ ++RDL A NIL+ K+SDFGL++F T +G + A
Sbjct: 135 ---AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTA 191
Query: 247 PEYATTGKLTAKSDIFSFGVVLLELIT--GRPAMDDS 281
PE K T+ SD +S+G+V+ E+++ RP D S
Sbjct: 192 PEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMS 228
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 106/209 (50%), Gaps = 18/209 (8%)
Query: 73 NFKDTNFLGQGGFGAVYKGKLAETGQVV----AVKQLDD-TGFQGEKEFLVEVLMLSLMR 127
FK LG G FG VYKG G+ V A+K+L + T + KE L E +++ +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 128 HPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKP---LDWNTRMKIAAGAAR 184
+P++ L+G C T +L+ + MP G L D++ + L+W ++ A+
Sbjct: 76 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 128
Query: 185 GLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGY 244
G+ YL ++ +++RDL A N+L+ H K++DFG AK +K + + +
Sbjct: 129 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKW 185
Query: 245 CAPEYATTGKLTAKSDIFSFGVVLLELIT 273
A E T +SD++S+GV + EL+T
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 102/207 (49%), Gaps = 17/207 (8%)
Query: 80 LGQGGFGAVYKGKLA-----ETGQVVAVKQLDDTGFQGEK-EFLVEVLMLSLMRHPNLVH 133
LGQG FG VY+G E VA+K +++ E+ EFL E ++ ++V
Sbjct: 23 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 82
Query: 134 LIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEM------KPLDWNTRMKIAAGAARGLE 187
L+G ++G L++ E M G L+ +L L P M P + +++A A G+
Sbjct: 83 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMA 142
Query: 188 YLH-NKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCA 246
YL+ NK ++RDL A N ++ + F K+ DFG+ + D + + + +
Sbjct: 143 YLNANK----FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 198
Query: 247 PEYATTGKLTAKSDIFSFGVVLLELIT 273
PE G T SD++SFGVVL E+ T
Sbjct: 199 PESLKDGVFTTYSDVWSFGVVLWEIAT 225
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 100/204 (49%), Gaps = 17/204 (8%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLVHLIGYCA 139
LG G FG VYK + ET + A K +D + ++++VE+ +L+ HPN+V L+
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 140 EGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIY 199
++ E+ G+++ +L L +PL + + L YLH D +I+
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELE---RPLTESQIQVVCKQTLDALNYLH---DNKIIH 158
Query: 200 RDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTR--VMGTHGYCAPEYAT--TGK- 254
RDLKAGNIL KL+DFG++ + + R +GT + APE T K
Sbjct: 159 RDLKAGNILFTLDGDIKLADFGVS----AKNTRXIQRRDXFIGTPYWMAPEVVMCETSKD 214
Query: 255 --LTAKSDIFSFGVVLLELITGRP 276
K+D++S G+ L+E+ P
Sbjct: 215 RPYDYKADVWSLGITLIEMAEIEP 238
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 110/225 (48%), Gaps = 36/225 (16%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKLAETGQVV--AVKQL-------DDTGFQGEKEFLVEVLM 122
++ K + +G+G FG V K ++ + G + A+K++ D F GE E L +
Sbjct: 22 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCK--- 78
Query: 123 LSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHL-----LGLTPEM-------KPL 170
L HPN+++L+G C L EY P G+L D L L P L
Sbjct: 79 --LGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTL 136
Query: 171 DWNTRMKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGD 230
+ AA ARG++YL K I+R+L A NIL+G+ + K++DFGL++ G
Sbjct: 137 SSQQLLHFAADVARGMDYLSQKQ---FIHRNLAARNILVGENYVAKIADFGLSR----GQ 189
Query: 231 KSHVSTRVMGTH--GYCAPEYATTGKLTAKSDIFSFGVVLLELIT 273
+ +V + MG + A E T SD++S+GV+L E+++
Sbjct: 190 EVYVK-KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 96/202 (47%), Gaps = 9/202 (4%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNL 131
+ K LG G FG V+ G +V AVK L G FL E ++ ++H L
Sbjct: 19 ETLKLVERLGAGQFGEVWMGYYNGHTKV-AVKSLKQ-GSMSPDAFLAEANLMKQLQHQRL 76
Query: 132 VHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHN 191
V L + ++ EYM GSL D L TP L N + +AA A G+ ++
Sbjct: 77 VRLYAVVTQ-EPIYIITEYMENGSLVDFLK--TPSGIKLTINKLLDMAAQIAEGMAFIEE 133
Query: 192 KADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYAT 251
+ I+RDL+A NIL+ K++DFGLA+ + + + APE
Sbjct: 134 RN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK-WTAPEAIN 189
Query: 252 TGKLTAKSDIFSFGVVLLELIT 273
G T KSD++SFG++L E++T
Sbjct: 190 YGTFTIKSDVWSFGILLTEIVT 211
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 106/209 (50%), Gaps = 18/209 (8%)
Query: 73 NFKDTNFLGQGGFGAVYKGKLAETGQVV----AVKQLDD-TGFQGEKEFLVEVLMLSLMR 127
FK LG G FG VYKG G+ V A+ +L + T + KE L E +++ +
Sbjct: 50 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVD 109
Query: 128 HPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKP---LDWNTRMKIAAGAAR 184
+P++ L+G C T +L+ + MP G L D++ + L+W ++ A+
Sbjct: 110 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 162
Query: 185 GLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGY 244
G+ YL ++ +++RDL A N+L+ H K++DFGLAK +K + + +
Sbjct: 163 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 219
Query: 245 CAPEYATTGKLTAKSDIFSFGVVLLELIT 273
A E T +SD++S+GV + EL+T
Sbjct: 220 MALESILHRIYTHQSDVWSYGVTVWELMT 248
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 106/209 (50%), Gaps = 18/209 (8%)
Query: 73 NFKDTNFLGQGGFGAVYKGKLAETGQVV----AVKQLDD-TGFQGEKEFLVEVLMLSLMR 127
FK LG G FG VYKG G+ V A+K+L + T + KE L E +++ +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 128 HPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKP---LDWNTRMKIAAGAAR 184
+P++ L+G C T +L+ + MP G L D++ + L+W ++ A+
Sbjct: 78 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 130
Query: 185 GLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGY 244
G+ YL ++ +++RDL A N+L+ H K++DFG AK +K + + +
Sbjct: 131 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKW 187
Query: 245 CAPEYATTGKLTAKSDIFSFGVVLLELIT 273
A E T +SD++S+GV + EL+T
Sbjct: 188 MALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 105/216 (48%), Gaps = 29/216 (13%)
Query: 80 LGQGGFGAVYKGKL-----AETGQVVAVKQLDDTGFQG--EKEFLVEVLMLSLMRHPNLV 132
LG+ FG VYKG L E Q VA+K L D +G +EF E ++ + ++HPN+V
Sbjct: 34 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKA-EGPLREEFRHEAMLRARLQHPNVV 92
Query: 133 HLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPE---------------MKPLDWNTRMK 177
L+G + +++ Y G L + L+ +P ++P D+ +
Sbjct: 93 CLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDF---VH 149
Query: 178 IAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTR 237
+ A A G+EYL + V+++DL N+L+ + K+SD GL + D +
Sbjct: 150 LVAQIAAGMEYLSSHH---VVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGN 206
Query: 238 VMGTHGYCAPEYATTGKLTAKSDIFSFGVVLLELIT 273
+ + APE GK + SDI+S+GVVL E+ +
Sbjct: 207 SLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 242
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 106/209 (50%), Gaps = 18/209 (8%)
Query: 73 NFKDTNFLGQGGFGAVYKGKLAETGQVV----AVKQLDD-TGFQGEKEFLVEVLMLSLMR 127
FK L G FG VYKG G+ V A+K+L + T + KE L E +++ +
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 128 HPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKP---LDWNTRMKIAAGAAR 184
+P++ L+G C T +L+ + MP G L D++ + L+W ++ A+
Sbjct: 83 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 135
Query: 185 GLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGY 244
G+ YL ++ +++RDL A N+L+ H K++DFGLAK +K + + +
Sbjct: 136 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 192
Query: 245 CAPEYATTGKLTAKSDIFSFGVVLLELIT 273
A E T +SD++S+GV + EL+T
Sbjct: 193 MALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 96/202 (47%), Gaps = 9/202 (4%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNL 131
+ K LG G FG V+ G +V AVK L G FL E ++ ++H L
Sbjct: 21 ETLKLVERLGAGQFGEVWMGYYNGHTKV-AVKSLKQ-GSMSPDAFLAEANLMKQLQHQRL 78
Query: 132 VHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHN 191
V L + ++ EYM GSL D L TP L N + +AA A G+ ++
Sbjct: 79 VRLYAVVTQ-EPIYIITEYMENGSLVDFLK--TPSGIKLTINKLLDMAAQIAEGMAFIEE 135
Query: 192 KADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYAT 251
+ I+RDL+A NIL+ K++DFGLA+ + + + APE
Sbjct: 136 RN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK-WTAPEAIN 191
Query: 252 TGKLTAKSDIFSFGVVLLELIT 273
G T KSD++SFG++L E++T
Sbjct: 192 YGTFTIKSDVWSFGILLTEIVT 213
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 96/202 (47%), Gaps = 9/202 (4%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNL 131
+ K LG G FG V+ G +V AVK L G FL E ++ ++H L
Sbjct: 15 ETLKLVERLGAGQFGEVWMGYYNGHTKV-AVKSLKQ-GSMSPDAFLAEANLMKQLQHQRL 72
Query: 132 VHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHN 191
V L + ++ EYM GSL D L TP L N + +AA A G+ ++
Sbjct: 73 VRLYAVVTQ-EPIYIITEYMENGSLVDFLK--TPSGIKLTINKLLDMAAQIAEGMAFIEE 129
Query: 192 KADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYAT 251
+ I+RDL+A NIL+ K++DFGLA+ + + + APE
Sbjct: 130 RN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK-WTAPEAIN 185
Query: 252 TGKLTAKSDIFSFGVVLLELIT 273
G T KSD++SFG++L E++T
Sbjct: 186 YGTFTIKSDVWSFGILLTEIVT 207
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 106/209 (50%), Gaps = 18/209 (8%)
Query: 73 NFKDTNFLGQGGFGAVYKGKLAETGQVV----AVKQLDD-TGFQGEKEFLVEVLMLSLMR 127
FK LG G FG VYKG G+ V A+K+L + T + KE L E +++ +
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 128 HPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKP---LDWNTRMKIAAGAAR 184
+P++ L+G C T +L+ + MP G L D++ + L+W ++ A+
Sbjct: 83 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 135
Query: 185 GLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGY 244
G+ YL ++ +++RDL A N+L+ H K++DFG AK +K + + +
Sbjct: 136 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKW 192
Query: 245 CAPEYATTGKLTAKSDIFSFGVVLLELIT 273
A E T +SD++S+GV + EL+T
Sbjct: 193 MALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 96/202 (47%), Gaps = 9/202 (4%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNL 131
+ K LG G FG V+ G +V AVK L G FL E ++ ++H L
Sbjct: 22 ETLKLVERLGAGQFGEVWMGYYNGHTKV-AVKSLKQ-GSMSPDAFLAEANLMKQLQHQRL 79
Query: 132 VHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHN 191
V L + ++ EYM GSL D L TP L N + +AA A G+ ++
Sbjct: 80 VRLYAVVTQ-EPIYIITEYMENGSLVDFLK--TPSGIKLTINKLLDMAAQIAEGMAFIEE 136
Query: 192 KADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYAT 251
+ I+RDL+A NIL+ K++DFGLA+ + + + APE
Sbjct: 137 RN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK-WTAPEAIN 192
Query: 252 TGKLTAKSDIFSFGVVLLELIT 273
G T KSD++SFG++L E++T
Sbjct: 193 YGTFTIKSDVWSFGILLTEIVT 214
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 96/202 (47%), Gaps = 9/202 (4%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNL 131
+ K LG G FG V+ G +V AVK L G FL E ++ ++H L
Sbjct: 13 ETLKLVERLGAGQFGEVWMGYYNGHTKV-AVKSLKQ-GSMSPDAFLAEANLMKQLQHQRL 70
Query: 132 VHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHN 191
V L + ++ EYM GSL D L TP L N + +AA A G+ ++
Sbjct: 71 VRLYAVVTQ-EPIYIITEYMENGSLVDFLK--TPSGIKLTINKLLDMAAQIAEGMAFIEE 127
Query: 192 KADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYAT 251
+ I+RDL+A NIL+ K++DFGLA+ + + + APE
Sbjct: 128 RN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK-WTAPEAIN 183
Query: 252 TGKLTAKSDIFSFGVVLLELIT 273
G T KSD++SFG++L E++T
Sbjct: 184 YGTFTIKSDVWSFGILLTEIVT 205
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 97/203 (47%), Gaps = 11/203 (5%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNL 131
+ K LG G FG V+ G +V AVK L G FL E ++ ++H L
Sbjct: 18 ETLKLVERLGAGQFGEVWMGYYNGHTKV-AVKSLKQ-GSMSPDAFLAEANLMKQLQHQRL 75
Query: 132 VHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHN 191
V L + ++ EYM GSL D L TP L N + +AA A G+ ++
Sbjct: 76 VRLYAVVTQEPIYIIT-EYMENGSLVDFLK--TPSGIKLTINKLLDMAAQIAEGMAFIEE 132
Query: 192 KADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTR-VMGTHGYCAPEYA 250
+ I+RDL+A NIL+ K++DFGLA+ D + + + APE
Sbjct: 133 RN---YIHRDLRAANILVSDTLSCKIADFGLARL--IEDNEYTAREGAKFPIKWTAPEAI 187
Query: 251 TTGKLTAKSDIFSFGVVLLELIT 273
G T KSD++SFG++L E++T
Sbjct: 188 NYGTFTIKSDVWSFGILLTEIVT 210
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 97/203 (47%), Gaps = 11/203 (5%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNL 131
+ K LG G FG V+ G +V AVK L G FL E ++ ++H L
Sbjct: 19 ETLKLVERLGAGQFGEVWMGYYNGHTKV-AVKSLKQ-GSMSPDAFLAEANLMKQLQHQRL 76
Query: 132 VHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHN 191
V L + ++ EYM GSL D L TP L N + +AA A G+ ++
Sbjct: 77 VRLYAVVTQEPIYIIT-EYMENGSLVDFLK--TPSGIKLTINKLLDMAAQIAEGMAFIEE 133
Query: 192 KADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTR-VMGTHGYCAPEYA 250
+ I+RDL+A NIL+ K++DFGLA+ D + + + APE
Sbjct: 134 RN---YIHRDLRAANILVSDTLSCKIADFGLARL--IEDNEYTAREGAKFPIKWTAPEAI 188
Query: 251 TTGKLTAKSDIFSFGVVLLELIT 273
G T KSD++SFG++L E++T
Sbjct: 189 NYGTFTIKSDVWSFGILLTEIVT 211
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 96/202 (47%), Gaps = 9/202 (4%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNL 131
+ K LG G FG V+ G +V AVK L G FL E ++ ++H L
Sbjct: 14 ETLKLVERLGAGQFGEVWMGYYNGHTKV-AVKSLKQ-GSMSPDAFLAEANLMKQLQHQRL 71
Query: 132 VHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHN 191
V L + ++ EYM GSL D L TP L N + +AA A G+ ++
Sbjct: 72 VRLYAVVTQ-EPIYIITEYMENGSLVDFLK--TPSGIKLTINKLLDMAAQIAEGMAFIEE 128
Query: 192 KADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYAT 251
+ I+RDL+A NIL+ K++DFGLA+ + + + APE
Sbjct: 129 RN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK-WTAPEAIN 184
Query: 252 TGKLTAKSDIFSFGVVLLELIT 273
G T KSD++SFG++L E++T
Sbjct: 185 YGTFTIKSDVWSFGILLTEIVT 206
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 96/202 (47%), Gaps = 9/202 (4%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNL 131
+ K LG G FG V+ G +V AVK L G FL E ++ ++H L
Sbjct: 13 ETLKLVERLGAGQFGEVWMGYYNGHTKV-AVKSLKQ-GSMSPDAFLAEANLMKQLQHQRL 70
Query: 132 VHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHN 191
V L + ++ EYM GSL D L TP L N + +AA A G+ ++
Sbjct: 71 VRLYAVVTQ-EPIYIITEYMENGSLVDFLK--TPSGIKLTINKLLDMAAQIAEGMAFIEE 127
Query: 192 KADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYAT 251
+ I+RDL+A NIL+ K++DFGLA+ + + + APE
Sbjct: 128 RN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK-WTAPEAIN 183
Query: 252 TGKLTAKSDIFSFGVVLLELIT 273
G T KSD++SFG++L E++T
Sbjct: 184 YGTFTIKSDVWSFGILLTEIVT 205
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 105/217 (48%), Gaps = 17/217 (7%)
Query: 75 KDTNFLGQGGFGAVYKGKLAETGQ---VVAVKQLDDTGF--QGEKEFLVEVLMLSLMRHP 129
K +G G FG V +G+L G+ VA+K L G+ + +EFL E ++ HP
Sbjct: 17 KIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKG-GYTERQRREFLSEASIMGQFEHP 75
Query: 130 NLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYL 189
N++ L G +++ E+M G+L+ L + + ++ G A G+ YL
Sbjct: 76 NIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLR---GIASGMRYL 132
Query: 190 HNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTH---GYCA 246
A+ ++RDL A NIL+ K+SDFGL++F T +G + A
Sbjct: 133 ---AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTA 189
Query: 247 PEYATTGKLTAKSDIFSFGVVLLELIT--GRPAMDDS 281
PE K T+ SD +S+G+V+ E+++ RP D S
Sbjct: 190 PEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMS 226
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 105/216 (48%), Gaps = 29/216 (13%)
Query: 80 LGQGGFGAVYKGKL-----AETGQVVAVKQLDDTGFQG--EKEFLVEVLMLSLMRHPNLV 132
LG+ FG VYKG L E Q VA+K L D +G +EF E ++ + ++HPN+V
Sbjct: 17 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKA-EGPLREEFRHEAMLRARLQHPNVV 75
Query: 133 HLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPE---------------MKPLDWNTRMK 177
L+G + +++ Y G L + L+ +P ++P D+ +
Sbjct: 76 CLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDF---VH 132
Query: 178 IAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTR 237
+ A A G+EYL + V+++DL N+L+ + K+SD GL + D +
Sbjct: 133 LVAQIAAGMEYLSSHH---VVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGN 189
Query: 238 VMGTHGYCAPEYATTGKLTAKSDIFSFGVVLLELIT 273
+ + APE GK + SDI+S+GVVL E+ +
Sbjct: 190 SLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 97/203 (47%), Gaps = 11/203 (5%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNL 131
+ K LG G FG V+ G +V AVK L G FL E ++ ++H L
Sbjct: 13 ETLKLVERLGAGQFGEVWMGYYNGHTKV-AVKSLKQ-GSMSPDAFLAEANLMKQLQHQRL 70
Query: 132 VHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHN 191
V L + ++ EYM GSL D L TP L N + +AA A G+ ++
Sbjct: 71 VRLYAVVTQEPIYIIT-EYMENGSLVDFLK--TPSGIKLTINKLLDMAAQIAEGMAFIEE 127
Query: 192 KADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTR-VMGTHGYCAPEYA 250
+ I+RDL+A NIL+ K++DFGLA+ D + + + APE
Sbjct: 128 RN---YIHRDLRAANILVSDTLSCKIADFGLARL--IEDNEYTAREGAKFPIKWTAPEAI 182
Query: 251 TTGKLTAKSDIFSFGVVLLELIT 273
G T KSD++SFG++L E++T
Sbjct: 183 NYGTFTIKSDVWSFGILLTEIVT 205
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 97/203 (47%), Gaps = 11/203 (5%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNL 131
+ K LG G FG V+ G +V AVK L G FL E ++ ++H L
Sbjct: 23 ETLKLVERLGAGQFGEVWMGYYNGHTKV-AVKSLKQ-GSMSPDAFLAEANLMKQLQHQRL 80
Query: 132 VHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHN 191
V L + ++ EYM GSL D L TP L N + +AA A G+ ++
Sbjct: 81 VRLYAVVTQ-EPIYIITEYMENGSLVDFLK--TPSGIKLTINKLLDMAAQIAEGMAFIEE 137
Query: 192 KADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTR-VMGTHGYCAPEYA 250
+ I+RDL+A NIL+ K++DFGLA+ D + + + APE
Sbjct: 138 RN---YIHRDLRAANILVSDTLSCKIADFGLARL--IEDNEYTAREGAKFPIKWTAPEAI 192
Query: 251 TTGKLTAKSDIFSFGVVLLELIT 273
G T KSD++SFG++L E++T
Sbjct: 193 NYGTFTIKSDVWSFGILLTEIVT 215
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 103/209 (49%), Gaps = 18/209 (8%)
Query: 73 NFKDTNFLGQGGFGAVYKGKLAETGQ----VVAVKQL-DDTGFQGEKEFLVEVLMLSLMR 127
+ LG G FG VYKG G+ VA+K L ++T + KE L E +++ +
Sbjct: 18 ELRKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVG 77
Query: 128 HPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLL---GLTPEMKPLDWNTRMKIAAGAAR 184
P + L+G C T +L V + MP G L DH+ G L+W ++ A+
Sbjct: 78 SPYVSRLLGICLTSTVQL-VTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQI------AK 130
Query: 185 GLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGY 244
G+ YL D +++RDL A N+L+ H K++DFGLA+ + + + +
Sbjct: 131 GMSYLE---DVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKW 187
Query: 245 CAPEYATTGKLTAKSDIFSFGVVLLELIT 273
A E + T +SD++S+GV + EL+T
Sbjct: 188 MALESILRRRFTHQSDVWSYGVTVWELMT 216
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 97/203 (47%), Gaps = 11/203 (5%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNL 131
+ K LG G FG V+ G +V AVK L G FL E ++ ++H L
Sbjct: 8 ETLKLVERLGAGQFGEVWMGYYNGHTKV-AVKSLKQ-GSMSPDAFLAEANLMKQLQHQRL 65
Query: 132 VHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHN 191
V L + ++ EYM GSL D L TP L N + +AA A G+ ++
Sbjct: 66 VRLYAVVTQEPIYIIT-EYMENGSLVDFLK--TPSGIKLTINKLLDMAAQIAEGMAFIEE 122
Query: 192 KADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTR-VMGTHGYCAPEYA 250
+ I+RDL+A NIL+ K++DFGLA+ D + + + APE
Sbjct: 123 RN---YIHRDLRAANILVSDTLSCKIADFGLARL--IEDNEYTAREGAKFPIKWTAPEAI 177
Query: 251 TTGKLTAKSDIFSFGVVLLELIT 273
G T KSD++SFG++L E++T
Sbjct: 178 NYGTFTIKSDVWSFGILLTEIVT 200
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 98/202 (48%), Gaps = 11/202 (5%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLD-DTGFQGEKEFLVEVLMLSLMRHPNLVHLIGYC 138
+G+G FG V+KG T QVVA+K +D + ++ E+ +LS + G
Sbjct: 31 IGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVTKYYGSY 90
Query: 139 AEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVI 198
+G++ ++ EY+ GS D L P D + +GL+YLH++ I
Sbjct: 91 LKGSKLWIIMEYLGGGSALDLL-----RAGPFDEFQIATMLKEILKGLDYLHSEKK---I 142
Query: 199 YRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTGKLTAK 258
+RD+KA N+LL + KL+DFG+A G D +GT + APE +K
Sbjct: 143 HRDIKAANVLLSEQGDVKLADFGVA--GQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSK 200
Query: 259 SDIFSFGVVLLELITGRPAMDD 280
+DI+S G+ +EL G P D
Sbjct: 201 ADIWSLGITAIELAKGEPPNSD 222
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 103/212 (48%), Gaps = 12/212 (5%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGE-KEFLVEVLMLSLMRHPN 130
D+++ +G G V A + VA+K+++ Q E L E+ +S HPN
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 74
Query: 131 LVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTP--EMKP--LDWNTRMKIAAGAARGL 186
+V + LV + + GS+ D + + E K LD +T I GL
Sbjct: 75 IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGL 134
Query: 187 EYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTG---DKSHVSTRVMGTHG 243
EYLH I+RD+KAGNILLG+ +++DFG++ F TG ++ V +GT
Sbjct: 135 EYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPC 191
Query: 244 YCAPEYATTGK-LTAKSDIFSFGVVLLELITG 274
+ APE + K+DI+SFG+ +EL TG
Sbjct: 192 WMAPEVMEQVRGYDFKADIWSFGITAIELATG 223
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 74/209 (35%), Positives = 104/209 (49%), Gaps = 18/209 (8%)
Query: 74 FKDTNFLGQGGFGAV----YKGKLAETGQVVAVKQLD-DTGFQGEKEFLVEVLMLSLMRH 128
K LG+G FG V Y TG++VAVK L D G Q + E+ +L + H
Sbjct: 16 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYH 75
Query: 129 PNLVHLIGYCA-EGTQRL-LVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGL 186
+++ G C +G + L LV EY+PLGSL D+L + + L + A G+
Sbjct: 76 EHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQL-----LLFAQQICEGM 130
Query: 187 EYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHG--Y 244
YLH++ I+R+L A N+LL K+ DFGLAK P G + + R G +
Sbjct: 131 AYLHSQH---YIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHE-YYRVREDGDSPVFW 186
Query: 245 CAPEYATTGKLTAKSDIFSFGVVLLELIT 273
APE K SD++SFGV L EL+T
Sbjct: 187 YAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 106/208 (50%), Gaps = 25/208 (12%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLVHLIGYCA 139
LG G FG VYK K ETG + A K ++ + ++++VE+ +L+ HP +V L+G
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 86
Query: 140 EGTQRLLVYEYMPLGSLEDHLL----GLT-PEMKPLDWNTRMKIAAGAARGLEYLHNKAD 194
+ ++ E+ P G+++ +L GLT P+++ + L +LH+K
Sbjct: 87 HDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQ--------VVCRQMLEALNFLHSKR- 137
Query: 195 PPVIYRDLKAGNILLGKGFHPKLSDFGL-AKFGPTGDKSHVSTRVMGTHGYCAPEYATTG 253
+I+RDLKAGN+L+ +L+DFG+ AK T K +GT + APE
Sbjct: 138 --IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQK---RDSFIGTPYWMAPEVVMCE 192
Query: 254 KLT-----AKSDIFSFGVVLLELITGRP 276
+ K+DI+S G+ L+E+ P
Sbjct: 193 TMKDTPYDYKADIWSLGITLIEMAQIEP 220
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 84.0 bits (206), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 106/208 (50%), Gaps = 25/208 (12%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLVHLIGYCA 139
LG G FG VYK K ETG + A K ++ + ++++VE+ +L+ HP +V L+G
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 140 EGTQRLLVYEYMPLGSLEDHLL----GLT-PEMKPLDWNTRMKIAAGAARGLEYLHNKAD 194
+ ++ E+ P G+++ +L GLT P+++ + L +LH+K
Sbjct: 79 HDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQ--------VVCRQMLEALNFLHSKR- 129
Query: 195 PPVIYRDLKAGNILLGKGFHPKLSDFGL-AKFGPTGDKSHVSTRVMGTHGYCAPEYATTG 253
+I+RDLKAGN+L+ +L+DFG+ AK T K +GT + APE
Sbjct: 130 --IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQK---RDSFIGTPYWMAPEVVMCE 184
Query: 254 KLT-----AKSDIFSFGVVLLELITGRP 276
+ K+DI+S G+ L+E+ P
Sbjct: 185 TMKDTPYDYKADIWSLGITLIEMAQIEP 212
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 84.0 bits (206), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 103/212 (48%), Gaps = 12/212 (5%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGE-KEFLVEVLMLSLMRHPN 130
D+++ +G G V A + VA+K+++ Q E L E+ +S HPN
Sbjct: 10 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 69
Query: 131 LVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTP--EMKP--LDWNTRMKIAAGAARGL 186
+V + LV + + GS+ D + + E K LD +T I GL
Sbjct: 70 IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGL 129
Query: 187 EYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTG---DKSHVSTRVMGTHG 243
EYLH I+RD+KAGNILLG+ +++DFG++ F TG ++ V +GT
Sbjct: 130 EYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPC 186
Query: 244 YCAPEYATTGK-LTAKSDIFSFGVVLLELITG 274
+ APE + K+DI+SFG+ +EL TG
Sbjct: 187 WMAPEVMEQVRGYDFKADIWSFGITAIELATG 218
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 84.0 bits (206), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 107/216 (49%), Gaps = 15/216 (6%)
Query: 74 FKDTNFLGQGGFGAVYKGKLAETGQ---VVAVKQLDDTGF--QGEKEFLVEVLMLSLMRH 128
K +G G FG V G+L G+ VA+K L G+ + ++FL E ++ H
Sbjct: 31 IKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLK-AGYTDKQRRDFLSEASIMGQFDH 89
Query: 129 PNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEY 188
PN++HL G + +++ EYM GSL+ L + ++ G G++Y
Sbjct: 90 PNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLR---GIGSGMKY 146
Query: 189 LHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTH-GYCAP 247
L +D ++RDL A NIL+ K+SDFG+++ ++ +TR + AP
Sbjct: 147 L---SDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAP 203
Query: 248 EYATTGKLTAKSDIFSFGVVLLELIT--GRPAMDDS 281
E K T+ SD++S+G+V+ E+++ RP D S
Sbjct: 204 EAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMS 239
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 107/216 (49%), Gaps = 15/216 (6%)
Query: 74 FKDTNFLGQGGFGAVYKGKLAETGQ---VVAVKQLDDTGF--QGEKEFLVEVLMLSLMRH 128
K +G G FG V G+L G+ VA+K L G+ + ++FL E ++ H
Sbjct: 16 IKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLK-AGYTDKQRRDFLSEASIMGQFDH 74
Query: 129 PNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEY 188
PN++HL G + +++ EYM GSL+ L + ++ G G++Y
Sbjct: 75 PNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLR---GIGSGMKY 131
Query: 189 LHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTH-GYCAP 247
L +D ++RDL A NIL+ K+SDFG+++ ++ +TR + AP
Sbjct: 132 L---SDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAP 188
Query: 248 EYATTGKLTAKSDIFSFGVVLLELIT--GRPAMDDS 281
E K T+ SD++S+G+V+ E+++ RP D S
Sbjct: 189 EAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMS 224
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/209 (35%), Positives = 100/209 (47%), Gaps = 18/209 (8%)
Query: 74 FKDTNFLGQGGFGAV----YKGKLAETGQVVAVKQLD-DTGFQGEKEFLVEVLMLSLMRH 128
K LG+G FG V Y TG++VAVK L D G Q + E+ +L + H
Sbjct: 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYH 92
Query: 129 PNLVHLIGYC--AEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGL 186
+++ G C A LV EY+PLGSL D+L + + L + A G+
Sbjct: 93 EHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLAQL-----LLFAQQICEGM 147
Query: 187 EYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHG--Y 244
YLH + I+RDL A N+LL K+ DFGLAK P G + + R G +
Sbjct: 148 AYLHAQH---YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXY-RVREDGDSPVFW 203
Query: 245 CAPEYATTGKLTAKSDIFSFGVVLLELIT 273
APE K SD++SFGV L EL+T
Sbjct: 204 YAPECLKEYKFYYASDVWSFGVTLYELLT 232
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 99/208 (47%), Gaps = 16/208 (7%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEK---EFLVEVLMLSLMRHPNLVHLIG 136
LG G FG V GK TG VAVK L+ + + E+ L L RHP+++ L
Sbjct: 24 LGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQ 83
Query: 137 YCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPP 196
+ + +V EY+ G L D++ + LD ++ G++Y H
Sbjct: 84 VISTPSDIFMVMEYVSGGELFDYIC----KNGRLDEKESRRLFQQILSGVDYCHRHM--- 136
Query: 197 VIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTGKLT 256
V++RDLK N+LL + K++DFGL+ G+ S G+ Y APE +G+L
Sbjct: 137 VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSC---GSPNYAAPE-VISGRLY 192
Query: 257 A--KSDIFSFGVVLLELITGRPAMDDSQ 282
A + DI+S GV+L L+ G DD
Sbjct: 193 AGPEVDIWSSGVILYALLCGTLPFDDDH 220
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 107/217 (49%), Gaps = 15/217 (6%)
Query: 74 FKDTNFLGQGGFGAVYKGKLAETGQ---VVAVKQLDDTGF--QGEKEFLVEVLMLSLMRH 128
K +G G FG V G+L G+ VA+K L G+ + ++FL E ++ H
Sbjct: 10 IKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLK-AGYTDKQRRDFLSEASIMGQFDH 68
Query: 129 PNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEY 188
PN++HL G + +++ EYM GSL+ L + ++ G G++Y
Sbjct: 69 PNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLR---GIGSGMKY 125
Query: 189 LHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTH-GYCAP 247
L +D ++RDL A NIL+ K+SDFG+++ ++ +TR + AP
Sbjct: 126 L---SDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAP 182
Query: 248 EYATTGKLTAKSDIFSFGVVLLELIT--GRPAMDDSQ 282
E K T+ SD++S+G+V+ E+++ RP D S
Sbjct: 183 EAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN 219
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/209 (35%), Positives = 103/209 (49%), Gaps = 18/209 (8%)
Query: 74 FKDTNFLGQGGFGAV----YKGKLAETGQVVAVKQLD-DTGFQGEKEFLVEVLMLSLMRH 128
K LG+G FG V Y TG++VAVK L D G Q + E+ +L + H
Sbjct: 16 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYH 75
Query: 129 PNLVHLIGYCA-EGTQRL-LVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGL 186
+++ G C +G + L LV EY+PLGSL D+L + + L + A G+
Sbjct: 76 EHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQL-----LLFAQQICEGM 130
Query: 187 EYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHG--Y 244
YLH + I+R+L A N+LL K+ DFGLAK P G + + R G +
Sbjct: 131 AYLHAQH---YIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHE-YYRVREDGDSPVFW 186
Query: 245 CAPEYATTGKLTAKSDIFSFGVVLLELIT 273
APE K SD++SFGV L EL+T
Sbjct: 187 YAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 104/200 (52%), Gaps = 13/200 (6%)
Query: 80 LGQGGFGAVYKGKLAETGQV---VAVKQLDDTGF--QGEKEFLVEVLMLSLMRHPNLVHL 134
+G G FG V G+L G+ VA+K L G+ + ++FL E ++ HPN++HL
Sbjct: 30 IGAGEFGEVCSGRLKLPGKRELPVAIKTLK-VGYTEKQRRDFLGEASIMGQFDHPNIIHL 88
Query: 135 IGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKAD 194
G + ++V EYM GSL+ L + + ++ G + G++YL +D
Sbjct: 89 EGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLR---GISAGMKYL---SD 142
Query: 195 PPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTH-GYCAPEYATTG 253
++RDL A NIL+ K+SDFGL++ ++ +TR + APE
Sbjct: 143 MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFR 202
Query: 254 KLTAKSDIFSFGVVLLELIT 273
K T+ SD++S+G+V+ E+++
Sbjct: 203 KFTSASDVWSYGIVMWEVVS 222
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 104/207 (50%), Gaps = 13/207 (6%)
Query: 73 NFKDTNFLGQGGFGAVYKGKL---AETGQVVAVKQLDDTGF--QGEKEFLVEVLMLSLMR 127
N +G G FG V G+L ++ VA+K L G+ + ++FL E ++
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK-VGYTEKQRRDFLGEASIMGQFD 104
Query: 128 HPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLE 187
HPN++ L G + ++V EYM GSL+ L + + ++ G A G++
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR---GIASGMK 161
Query: 188 YLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTH-GYCA 246
YL +D ++RDL A NIL+ K+SDFGLA+ ++ +TR + +
Sbjct: 162 YL---SDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTS 218
Query: 247 PEYATTGKLTAKSDIFSFGVVLLELIT 273
PE K T+ SD++S+G+VL E+++
Sbjct: 219 PEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/239 (32%), Positives = 120/239 (50%), Gaps = 30/239 (12%)
Query: 48 DTLSAHENKNKENTFTYRQLVAATDNFKDTNFLGQGGFGAVYKGKLAETGQ---VVAVKQ 104
D SA + K+ + ++V +D +G+G FG VY G+ + Q A+K
Sbjct: 2 DLDSALLAEVKDVLIPHERVVTHSDRV-----IGKGHFGVVYHGEYIDQAQNRIQCAIKS 56
Query: 105 LDD-TGFQGEKEFLVEVLMLSLMRHPNLVHLIGYC--AEGTQRLLVYEYMPLGSLEDHLL 161
L T Q + FL E L++ + HPN++ LIG EG +L+ YM G L +
Sbjct: 57 LSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLL-PYMCHGDLLQFIR 115
Query: 162 GLTPEMKPLDWNTRMKIAAG--AARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSD 219
+P+ P + I+ G ARG+EYL A+ ++RDL A N +L + F K++D
Sbjct: 116 --SPQRNP---TVKDLISFGLQVARGMEYL---AEQKFVHRDLAARNCMLDESFTVKVAD 167
Query: 220 FGLAKFGPTGDKSHVSTRVMGTHG-----YCAPEYATTGKLTAKSDIFSFGVVLLELIT 273
FGLA+ D+ + S + H + A E T + T KSD++SFGV+L EL+T
Sbjct: 168 FGLAR--DILDREYYSVQ-QHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLT 223
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 106/227 (46%), Gaps = 38/227 (16%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVE--VLMLSLMRHP 129
DN K +G+G +GAVYKG L E + VAVK F + F+ E + + LM H
Sbjct: 13 DNLKLLELIGRGRYGAVYKGSLDE--RPVAVKVF---SFANRQNFINEKNIYRVPLMEHD 67
Query: 130 NLVHLI----GYCAEG-TQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAAR 184
N+ I A+G + LLV EY P GSL +L + DW + ++A R
Sbjct: 68 NIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYL-----SLHTSDWVSSCRLAHSVTR 122
Query: 185 GLEYLHNKA------DPPVIYRDLKAGNILLGKGFHPKLSDFGLA------KFGPTGDKS 232
GL YLH + P + +RDL + N+L+ +SDFGL+ + G++
Sbjct: 123 GLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEED 182
Query: 233 HVSTRVMGTHGYCAPEYATTGKLTAKS--------DIFSFGVVLLEL 271
+ + +GT Y APE G + + D+++ G++ E+
Sbjct: 183 NAAISEVGTIRYMAPE-VLEGAVNLRDXESALKQVDMYALGLIYWEI 228
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 97/203 (47%), Gaps = 11/203 (5%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNL 131
+ K LG G FG V+ G +V AVK L G FL E ++ ++H L
Sbjct: 9 ETLKLVERLGAGQFGEVWMGYYNGHTKV-AVKSLKQ-GSMSPDAFLAEANLMKQLQHQRL 66
Query: 132 VHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHN 191
V L + ++ EYM GSL D L TP L N + +AA A G+ ++
Sbjct: 67 VRLYAVVTQ-EPIYIITEYMENGSLVDFLK--TPSGIKLTINKLLDMAAQIAEGMAFIEE 123
Query: 192 KADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTR-VMGTHGYCAPEYA 250
+ I+R+L+A NIL+ K++DFGLA+ D + + + APE
Sbjct: 124 RN---YIHRNLRAANILVSDTLSCKIADFGLARL--IEDNEYTAREGAKFPIKWTAPEAI 178
Query: 251 TTGKLTAKSDIFSFGVVLLELIT 273
G T KSD++SFG++L E++T
Sbjct: 179 NYGTFTIKSDVWSFGILLTEIVT 201
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 99/209 (47%), Gaps = 22/209 (10%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNL 131
++ K LG G FG V+ G + +V AVK L G + FL E ++ ++H L
Sbjct: 13 ESIKLVKRLGAGQFGEVWMGYYNNSTKV-AVKTLK-PGTMSVQAFLEEANLMKTLQHDKL 70
Query: 132 VHLIGYCAEGTQRLLVYEYMPLGSLEDHLLG------LTPEMKPLDWNTRMKIAAGAARG 185
V L ++ EYM GSL D L L P++ + +A A G
Sbjct: 71 VRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKL--------IDFSAQIAEG 122
Query: 186 LEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTR-VMGTHGY 244
+ Y+ K I+RDL+A N+L+ + K++DFGLA+ D + + +
Sbjct: 123 MAYIERKN---YIHRDLRAANVLVSESLMCKIADFGLARV--IEDNEYTAREGAKFPIKW 177
Query: 245 CAPEYATTGKLTAKSDIFSFGVVLLELIT 273
APE G T KSD++SFG++L E++T
Sbjct: 178 TAPEAINFGCFTIKSDVWSFGILLYEIVT 206
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 99/201 (49%), Gaps = 16/201 (7%)
Query: 83 GGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLVHLIGYCAEGT 142
G FG VYK + ET + A K +D + ++++VE+ +L+ HPN+V L+
Sbjct: 21 GDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYEN 80
Query: 143 QRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIYRDL 202
++ E+ G+++ +L L +PL + + L YLH D +I+RDL
Sbjct: 81 NLWILIEFCAGGAVDAVMLELE---RPLTESQIQVVCKQTLDALNYLH---DNKIIHRDL 134
Query: 203 KAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTR--VMGTHGYCAPEYAT--TGK---L 255
KAGNIL KL+DFG++ ++ + R +GT + APE T K
Sbjct: 135 KAGNILFTLDGDIKLADFGVSA---KNTRTXIQRRDSFIGTPYWMAPEVVMCETSKDRPY 191
Query: 256 TAKSDIFSFGVVLLELITGRP 276
K+D++S G+ L+E+ P
Sbjct: 192 DYKADVWSLGITLIEMAEIEP 212
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 101/215 (46%), Gaps = 16/215 (7%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKLAETGQ-----VVAVKQLDDTGFQGEKEFLVEVL--MLS 124
+N + LG G FG V + G+ VAVK L T EKE L+ L M
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 125 LMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTP------EMKPLDWNTRMKI 178
L +H N+V+L+G C G L++ EY G L + L + +PL+ +
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHF 165
Query: 179 AAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRV 238
++ A+G+ +L +K I+RD+ A N+LL G K+ DFGLA+ V
Sbjct: 166 SSQVAQGMAFLASKN---CIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNA 222
Query: 239 MGTHGYCAPEYATTGKLTAKSDIFSFGVVLLELIT 273
+ APE T +SD++S+G++L E+ +
Sbjct: 223 RLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 101/215 (46%), Gaps = 16/215 (7%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKLAETGQ-----VVAVKQLDDTGFQGEKEFLVEVL--MLS 124
+N + LG G FG V + G+ VAVK L T EKE L+ L M
Sbjct: 38 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 97
Query: 125 LMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTP------EMKPLDWNTRMKI 178
L +H N+V+L+G C G L++ EY G L + L + +PL+ +
Sbjct: 98 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHF 157
Query: 179 AAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRV 238
++ A+G+ +L +K I+RD+ A N+LL G K+ DFGLA+ V
Sbjct: 158 SSQVAQGMAFLASKN---CIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNA 214
Query: 239 MGTHGYCAPEYATTGKLTAKSDIFSFGVVLLELIT 273
+ APE T +SD++S+G++L E+ +
Sbjct: 215 RLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 104/207 (50%), Gaps = 13/207 (6%)
Query: 73 NFKDTNFLGQGGFGAVYKGKL---AETGQVVAVKQLDDTGF--QGEKEFLVEVLMLSLMR 127
N +G G FG V G+L ++ VA+K L G+ + ++FL E ++
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK-VGYTEKQRRDFLGEASIMGQFD 104
Query: 128 HPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLE 187
HPN++ L G + ++V EYM GSL+ L + + ++ G A G++
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR---GIASGMK 161
Query: 188 YLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTH-GYCA 246
YL +D ++RDL A NIL+ K+SDFGL++ ++ +TR + +
Sbjct: 162 YL---SDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTS 218
Query: 247 PEYATTGKLTAKSDIFSFGVVLLELIT 273
PE K T+ SD++S+G+VL E+++
Sbjct: 219 PEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 104/207 (50%), Gaps = 13/207 (6%)
Query: 73 NFKDTNFLGQGGFGAVYKGKL---AETGQVVAVKQLDDTGF--QGEKEFLVEVLMLSLMR 127
N +G G FG V G+L ++ VA+K L G+ + ++FL E ++
Sbjct: 17 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK-VGYTEKQRRDFLGEASIMGQFD 75
Query: 128 HPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLE 187
HPN++ L G + ++V EYM GSL+ L + + ++ G A G++
Sbjct: 76 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR---GIASGMK 132
Query: 188 YLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTH-GYCA 246
YL +D ++RDL A NIL+ K+SDFGL++ ++ +TR + +
Sbjct: 133 YL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTS 189
Query: 247 PEYATTGKLTAKSDIFSFGVVLLELIT 273
PE K T+ SD++S+G+VL E+++
Sbjct: 190 PEAIAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 104/207 (50%), Gaps = 13/207 (6%)
Query: 73 NFKDTNFLGQGGFGAVYKGKL---AETGQVVAVKQLDDTGF--QGEKEFLVEVLMLSLMR 127
N +G G FG V G+L ++ VA+K L G+ + ++FL E ++
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK-VGYTEKQRRDFLGEASIMGQFD 104
Query: 128 HPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLE 187
HPN++ L G + ++V EYM GSL+ L + + ++ G A G++
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR---GIASGMK 161
Query: 188 YLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTH-GYCA 246
YL +D ++RDL A NIL+ K+SDFGL++ ++ +TR + +
Sbjct: 162 YL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTS 218
Query: 247 PEYATTGKLTAKSDIFSFGVVLLELIT 273
PE K T+ SD++S+G+VL E+++
Sbjct: 219 PEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 104/207 (50%), Gaps = 13/207 (6%)
Query: 73 NFKDTNFLGQGGFGAVYKGKL---AETGQVVAVKQLDDTGF--QGEKEFLVEVLMLSLMR 127
N +G G FG V G+L ++ VA+K L G+ + ++FL E ++
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK-VGYTEKQRRDFLGEASIMGQFD 104
Query: 128 HPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLE 187
HPN++ L G + ++V EYM GSL+ L + + ++ G A G++
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR---GIASGMK 161
Query: 188 YLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTH-GYCA 246
YL +D ++RDL A NIL+ K+SDFGL++ ++ +TR + +
Sbjct: 162 YL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTS 218
Query: 247 PEYATTGKLTAKSDIFSFGVVLLELIT 273
PE K T+ SD++S+G+VL E+++
Sbjct: 219 PEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 104/207 (50%), Gaps = 13/207 (6%)
Query: 73 NFKDTNFLGQGGFGAVYKGKL---AETGQVVAVKQLDDTGF--QGEKEFLVEVLMLSLMR 127
N +G G FG V G+L ++ VA+K L G+ + ++FL E ++
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK-VGYTEKQRRDFLGEASIMGQFD 104
Query: 128 HPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLE 187
HPN++ L G + ++V EYM GSL+ L + + ++ G A G++
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR---GIASGMK 161
Query: 188 YLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTH-GYCA 246
YL +D ++RDL A NIL+ K+SDFGL++ ++ +TR + +
Sbjct: 162 YL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTS 218
Query: 247 PEYATTGKLTAKSDIFSFGVVLLELIT 273
PE K T+ SD++S+G+VL E+++
Sbjct: 219 PEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 104/207 (50%), Gaps = 13/207 (6%)
Query: 73 NFKDTNFLGQGGFGAVYKGKL---AETGQVVAVKQLDDTGF--QGEKEFLVEVLMLSLMR 127
N +G G FG V G+L ++ VA+K L G+ + ++FL E ++
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK-VGYTEKQRRDFLGEASIMGQFD 104
Query: 128 HPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLE 187
HPN++ L G + ++V EYM GSL+ L + + ++ G A G++
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR---GIASGMK 161
Query: 188 YLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTH-GYCA 246
YL +D ++RDL A NIL+ K+SDFGL++ ++ +TR + +
Sbjct: 162 YL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTS 218
Query: 247 PEYATTGKLTAKSDIFSFGVVLLELIT 273
PE K T+ SD++S+G+VL E+++
Sbjct: 219 PEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 104/207 (50%), Gaps = 13/207 (6%)
Query: 73 NFKDTNFLGQGGFGAVYKGKL---AETGQVVAVKQLDDTGF--QGEKEFLVEVLMLSLMR 127
N +G G FG V G+L ++ VA+K L G+ + ++FL E ++
Sbjct: 44 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK-VGYTEKQRRDFLGEASIMGQFD 102
Query: 128 HPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLE 187
HPN++ L G + ++V EYM GSL+ L + + ++ G A G++
Sbjct: 103 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR---GIASGMK 159
Query: 188 YLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTH-GYCA 246
YL +D ++RDL A NIL+ K+SDFGL++ ++ +TR + +
Sbjct: 160 YL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTS 216
Query: 247 PEYATTGKLTAKSDIFSFGVVLLELIT 273
PE K T+ SD++S+G+VL E+++
Sbjct: 217 PEAIAYRKFTSASDVWSYGIVLWEVMS 243
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 95/202 (47%), Gaps = 9/202 (4%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNL 131
+ K LG G G V+ G +V AVK L G FL E ++ ++H L
Sbjct: 13 ETLKLVERLGAGQAGEVWMGYYNGHTKV-AVKSLKQ-GSMSPDAFLAEANLMKQLQHQRL 70
Query: 132 VHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHN 191
V L + ++ EYM GSL D L TP L N + +AA A G+ ++
Sbjct: 71 VRLYAVVTQ-EPIYIITEYMENGSLVDFLK--TPSGIKLTINKLLDMAAQIAEGMAFIEE 127
Query: 192 KADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYAT 251
+ I+RDL+A NIL+ K++DFGLA+ + + + APE
Sbjct: 128 RN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIK-WTAPEAIN 183
Query: 252 TGKLTAKSDIFSFGVVLLELIT 273
G T KSD++SFG++L E++T
Sbjct: 184 YGTFTIKSDVWSFGILLTEIVT 205
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 104/207 (50%), Gaps = 13/207 (6%)
Query: 73 NFKDTNFLGQGGFGAVYKGKL---AETGQVVAVKQLDDTGF--QGEKEFLVEVLMLSLMR 127
N +G G FG V G+L ++ VA+K L G+ + ++FL E ++
Sbjct: 34 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK-VGYTEKQRRDFLGEASIMGQFD 92
Query: 128 HPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLE 187
HPN++ L G + ++V EYM GSL+ L + + ++ G A G++
Sbjct: 93 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR---GIASGMK 149
Query: 188 YLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTH-GYCA 246
YL +D ++RDL A NIL+ K+SDFGL++ ++ +TR + +
Sbjct: 150 YL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTS 206
Query: 247 PEYATTGKLTAKSDIFSFGVVLLELIT 273
PE K T+ SD++S+G+VL E+++
Sbjct: 207 PEAIAYRKFTSASDVWSYGIVLWEVMS 233
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 104/220 (47%), Gaps = 29/220 (13%)
Query: 68 VAATDNFKDTNF------------LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKE 115
VAA D F + + +G+G FG V G G VAVK + + +
Sbjct: 177 VAAQDEFYRSGWALNMKELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKNDA--TAQA 232
Query: 116 FLVEVLMLSLMRHPNLVHLIGYCAEGTQRL-LVYEYMPLGSLEDHLLGLTPEMKPLDWNT 174
FL E +++ +RH NLV L+G E L +V EYM GSL D+L + L +
Sbjct: 233 FLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSV--LGGDC 290
Query: 175 RMKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAK-FGPTGDKSH 233
+K + +EYL ++RDL A N+L+ + K+SDFGL K T D
Sbjct: 291 LLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGK 347
Query: 234 VSTRVMGTHGYCAPEYATTGKLTAKSDIFSFGVVLLELIT 273
+ + + APE K + KSD++SFG++L E+ +
Sbjct: 348 LPVK------WTAPEALREKKFSTKSDVWSFGILLWEIYS 381
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 96/203 (47%), Gaps = 8/203 (3%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGF-QGEKEFLV-EVLMLSLMRHPNLVHLIGY 137
+G G +G K + G+++ K+LD + EK+ LV EV +L ++HPN+V
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 138 CAEGTQRLL--VYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKAD- 194
+ T L V EY G L + T E + LD +++ L+ H ++D
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 195 -PPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTG 253
V++RDLK N+ L + KL DFGLA+ D S T V GT Y +PE
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARI-LNHDTSFAKTFV-GTPYYMSPEQMNRM 191
Query: 254 KLTAKSDIFSFGVVLLELITGRP 276
KSDI+S G +L EL P
Sbjct: 192 SYNEKSDIWSLGCLLYELCALMP 214
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 99/209 (47%), Gaps = 15/209 (7%)
Query: 71 TDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLD-DTGFQGE--KEFLVEVLMLSLMR 127
DNF+ LG+G FG V ++ ETG + AVK L D Q + + + E +LSL R
Sbjct: 22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLAR 81
Query: 128 -HPNLVHLIGYCAEGTQRLL-VYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARG 185
HP L L C + RL V E++ G L H+ + + D AA
Sbjct: 82 NHPFLTQLFC-CFQTPDRLFFVMEFVNGGDLMFHI----QKSRRFDEARARFYAAEIISA 136
Query: 186 LEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYC 245
L +LH+K +IYRDLK N+LL H KL+DFG+ K G + + GT Y
Sbjct: 137 LMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVT--TATFCGTPDYI 191
Query: 246 APEYATTGKLTAKSDIFSFGVVLLELITG 274
APE D ++ GV+L E++ G
Sbjct: 192 APEILQEMLYGPAVDWWAMGVLLYEMLCG 220
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 104/205 (50%), Gaps = 20/205 (9%)
Query: 80 LGQGGFGAV----YKGKLAETGQVVAVKQLD-DTGFQGEKEFLVEVLMLSLMRHPNLVHL 134
LG+G FG V Y + TG+ VAVK L ++G + E+ +L + H N+V
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 135 IGYCAE--GTQRLLVYEYMPLGSLEDHLLGLTPEMK-PLDWNTRMKIAAGAARGLEYLHN 191
G C E G L+ E++P GSL+++L P+ K ++ ++K A +G++YL +
Sbjct: 89 KGICTEDGGNGIKLIMEFLPSGSLKEYL----PKNKNKINLKQQLKYAVQICKGMDYLGS 144
Query: 192 KADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVST---RVMGTHGYCAPE 248
+ ++RDL A N+L+ K+ DFGL K T DK + R Y APE
Sbjct: 145 RQ---YVHRDLAARNVLVESEHQVKIGDFGLTKAIET-DKEXXTVKDDRDSPVFWY-APE 199
Query: 249 YATTGKLTAKSDIFSFGVVLLELIT 273
K SD++SFGV L EL+T
Sbjct: 200 CLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 102/206 (49%), Gaps = 20/206 (9%)
Query: 75 KDTNFL---GQGGFGAVYKGKLAETGQV-VAVKQLDDTGFQGEKEFLVEVLMLSLMRHPN 130
KD FL G G FG V GK GQ VA+K + + G E EF+ E ++ + H
Sbjct: 9 KDLTFLKELGTGQFGVVKYGKW--RGQYDVAIKMIKE-GSMSEDEFIEEAKVMMNLSHEK 65
Query: 131 LVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLH 190
LV L G C + ++ EYM G L ++L + + +++ +EYL
Sbjct: 66 LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQT---QQLLEMCKDVCEAMEYLE 122
Query: 191 NKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTH---GYCAP 247
+K ++RDL A N L+ K+SDFGL+++ D + S+R G+ + P
Sbjct: 123 SKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRY--VLDDEYTSSR--GSKFPVRWSPP 175
Query: 248 EYATTGKLTAKSDIFSFGVVLLELIT 273
E K ++KSDI++FGV++ E+ +
Sbjct: 176 EVLMYSKFSSKSDIWAFGVLMWEIYS 201
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 97/206 (47%), Gaps = 15/206 (7%)
Query: 80 LGQGGFGAVYKGKLA-----ETGQVVAVKQLDDT-GFQGEKEFLVEVLMLSLMRHPNLVH 133
LG G FG VY+G+++ + VAVK L + Q E +FL+E L++S + H N+V
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 134 LIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTP---EMKPLDWNTRMKIAAGAARGLEYLH 190
IG + R ++ E M G L+ L P + L + +A A G +YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 191 NKADPPVIYRDLKAGNILL---GKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAP 247
I+RD+ A N LL G G K+ DFG+A+ M + P
Sbjct: 159 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 215
Query: 248 EYATTGKLTAKSDIFSFGVVLLELIT 273
E G T+K+D +SFGV+L E+ +
Sbjct: 216 EAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 104/205 (50%), Gaps = 20/205 (9%)
Query: 80 LGQGGFGAV----YKGKLAETGQVVAVKQLD-DTGFQGEKEFLVEVLMLSLMRHPNLVHL 134
LG+G FG V Y + TG+ VAVK L ++G + E+ +L + H N+V
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 135 IGYCAE--GTQRLLVYEYMPLGSLEDHLLGLTPEMK-PLDWNTRMKIAAGAARGLEYLHN 191
G C E G L+ E++P GSL+++L P+ K ++ ++K A +G++YL +
Sbjct: 77 KGICTEDGGNGIKLIMEFLPSGSLKEYL----PKNKNKINLKQQLKYAVQICKGMDYLGS 132
Query: 192 KADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVST---RVMGTHGYCAPE 248
+ ++RDL A N+L+ K+ DFGL K T DK + R Y APE
Sbjct: 133 RQ---YVHRDLAARNVLVESEHQVKIGDFGLTKAIET-DKEXXTVKDDRDSPVFWY-APE 187
Query: 249 YATTGKLTAKSDIFSFGVVLLELIT 273
K SD++SFGV L EL+T
Sbjct: 188 CLMQSKFYIASDVWSFGVTLHELLT 212
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 103/207 (49%), Gaps = 13/207 (6%)
Query: 73 NFKDTNFLGQGGFGAVYKGKL---AETGQVVAVKQLDDTGF--QGEKEFLVEVLMLSLMR 127
N +G G FG V G+L ++ VA+K L G+ + ++FL E ++
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK-VGYTEKQRRDFLGEASIMGQFD 104
Query: 128 HPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLE 187
HPN++ L G + ++V EYM GSL+ L + + ++ G A G++
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR---GIASGMK 161
Query: 188 YLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTH-GYCA 246
YL +D ++RDL A NIL+ K+SDFGL + ++ +TR + +
Sbjct: 162 YL---SDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTS 218
Query: 247 PEYATTGKLTAKSDIFSFGVVLLELIT 273
PE K T+ SD++S+G+VL E+++
Sbjct: 219 PEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 104/210 (49%), Gaps = 12/210 (5%)
Query: 70 ATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQL--DDTGFQGEKEFLVEVLMLSLMR 127
+ + +++ +G+G +G V K + +TG++VA+K+ D +K + E+ +L +R
Sbjct: 23 SMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLR 82
Query: 128 HPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLE 187
H NLV+L+ C + + LV+E++ L+D L L P LD+ K G+
Sbjct: 83 HENLVNLLEVCKKKKRWYLVFEFVDHTILDD--LELFP--NGLDYQVVQKYLFQIINGIG 138
Query: 188 YLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAP 247
+ H+ +I+RD+K NIL+ + KL DFG A+ V + T Y AP
Sbjct: 139 FCHSHN---IIHRDIKPENILVSQSGVVKLCDFGFAR--TLAAPGEVYDDEVATRWYRAP 193
Query: 248 EYATTGKLTAKS-DIFSFGVVLLELITGRP 276
E K+ D+++ G ++ E+ G P
Sbjct: 194 ELLVGDVKYGKAVDVWAIGCLVTEMFMGEP 223
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 104/220 (47%), Gaps = 29/220 (13%)
Query: 68 VAATDNFKDTNF------------LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKE 115
VAA D F + + +G+G FG V G G VAVK + + +
Sbjct: 5 VAAQDEFYRSGWALNMKELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKNDA--TAQA 60
Query: 116 FLVEVLMLSLMRHPNLVHLIGYCAEGTQRL-LVYEYMPLGSLEDHLLGLTPEMKPLDWNT 174
FL E +++ +RH NLV L+G E L +V EYM GSL D+L + L +
Sbjct: 61 FLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSV--LGGDC 118
Query: 175 RMKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAK-FGPTGDKSH 233
+K + +EYL ++RDL A N+L+ + K+SDFGL K T D
Sbjct: 119 LLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGK 175
Query: 234 VSTRVMGTHGYCAPEYATTGKLTAKSDIFSFGVVLLELIT 273
+ + + APE K + KSD++SFG++L E+ +
Sbjct: 176 LPVK------WTAPEALREKKFSTKSDVWSFGILLWEIYS 209
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 97/206 (47%), Gaps = 15/206 (7%)
Query: 80 LGQGGFGAVYKGKLA-----ETGQVVAVKQLDDT-GFQGEKEFLVEVLMLSLMRHPNLVH 133
LG G FG VY+G+++ + VAVK L + Q E +FL+E L++S + H N+V
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 134 LIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTP---EMKPLDWNTRMKIAAGAARGLEYLH 190
IG + R ++ E M G L+ L P + L + +A A G +YL
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 191 NKADPPVIYRDLKAGNILL---GKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAP 247
I+RD+ A N LL G G K+ DFG+A+ M + P
Sbjct: 173 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 229
Query: 248 EYATTGKLTAKSDIFSFGVVLLELIT 273
E G T+K+D +SFGV+L E+ +
Sbjct: 230 EAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 100/206 (48%), Gaps = 20/206 (9%)
Query: 73 NFKDTNFL---GQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHP 129
N K+ L G+G FG V G G VAVK + + + FL E +++ +RH
Sbjct: 4 NMKELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHS 59
Query: 130 NLVHLIGYCAEGTQRL-LVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEY 188
NLV L+G E L +V EYM GSL D+L + L + +K + +EY
Sbjct: 60 NLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSV--LGGDCLLKFSLDVCEAMEY 117
Query: 189 LHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAK-FGPTGDKSHVSTRVMGTHGYCAP 247
L ++RDL A N+L+ + K+SDFGL K T D + + + AP
Sbjct: 118 LEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVK------WTAP 168
Query: 248 EYATTGKLTAKSDIFSFGVVLLELIT 273
E K + KSD++SFG++L E+ +
Sbjct: 169 EALREKKFSTKSDVWSFGILLWEIYS 194
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 72/209 (34%), Positives = 100/209 (47%), Gaps = 18/209 (8%)
Query: 74 FKDTNFLGQGGFGAV----YKGKLAETGQVVAVKQLDD-TGFQGEKEFLVEVLMLSLMRH 128
K LG+G FG V Y TG++VAVK L + G Q + E+ +L + H
Sbjct: 11 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYH 70
Query: 129 PNLVHLIGYCAEGTQR--LLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGL 186
++V G C + ++ LV EY+PLGSL D+L + L + A G+
Sbjct: 71 EHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQL-----LLFAQQICEGM 125
Query: 187 EYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHG--Y 244
YLH + I+R L A N+LL K+ DFGLAK P G + + R G +
Sbjct: 126 AYLHAQH---YIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHE-YYRVREDGDSPVFW 181
Query: 245 CAPEYATTGKLTAKSDIFSFGVVLLELIT 273
APE K SD++SFGV L EL+T
Sbjct: 182 YAPECLKECKFYYASDVWSFGVTLYELLT 210
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 80.5 bits (197), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 72/209 (34%), Positives = 100/209 (47%), Gaps = 18/209 (8%)
Query: 74 FKDTNFLGQGGFGAV----YKGKLAETGQVVAVKQLDD-TGFQGEKEFLVEVLMLSLMRH 128
K LG+G FG V Y TG++VAVK L + G Q + E+ +L + H
Sbjct: 10 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYH 69
Query: 129 PNLVHLIGYCAEGTQR--LLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGL 186
++V G C + ++ LV EY+PLGSL D+L + L + A G+
Sbjct: 70 EHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQL-----LLFAQQICEGM 124
Query: 187 EYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHG--Y 244
YLH + I+R L A N+LL K+ DFGLAK P G + + R G +
Sbjct: 125 AYLHAQH---YIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHE-YYRVREDGDSPVFW 180
Query: 245 CAPEYATTGKLTAKSDIFSFGVVLLELIT 273
APE K SD++SFGV L EL+T
Sbjct: 181 YAPECLKECKFYYASDVWSFGVTLYELLT 209
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 104/222 (46%), Gaps = 19/222 (8%)
Query: 67 LVAATD------NFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQ--GEKEFLV 118
+ +ATD N++ +G+G F V + TG+ VAVK +D T ++
Sbjct: 4 ITSATDEQPHIGNYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFR 63
Query: 119 EVLMLSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKI 178
EV ++ ++ HPN+V L LV EY G + D+L+ MK + + +
Sbjct: 64 EVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVA-HGRMKEKEARAKFRQ 122
Query: 179 AAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRV 238
A ++Y H K +++RDLKA N+LL + K++DFG + G+K
Sbjct: 123 IVSA---VQYCHQKY---IVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDT---F 173
Query: 239 MGTHGYCAPEYATTGKLTA-KSDIFSFGVVLLELITGRPAMD 279
G+ Y APE K + D++S GV+L L++G D
Sbjct: 174 CGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 96/206 (46%), Gaps = 15/206 (7%)
Query: 80 LGQGGFGAVYKGKLA-----ETGQVVAVKQLDDT-GFQGEKEFLVEVLMLSLMRHPNLVH 133
LG G FG VY+G+++ + VAVK L + Q E +FL+E L++S H N+V
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 134 LIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTP---EMKPLDWNTRMKIAAGAARGLEYLH 190
IG + R ++ E M G L+ L P + L + +A A G +YL
Sbjct: 98 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 191 NKADPPVIYRDLKAGNILL---GKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAP 247
I+RD+ A N LL G G K+ DFG+A+ M + P
Sbjct: 158 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 214
Query: 248 EYATTGKLTAKSDIFSFGVVLLELIT 273
E G T+K+D +SFGV+L E+ +
Sbjct: 215 EAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 96/206 (46%), Gaps = 15/206 (7%)
Query: 80 LGQGGFGAVYKGKLA-----ETGQVVAVKQLDDT-GFQGEKEFLVEVLMLSLMRHPNLVH 133
LG G FG VY+G+++ + VAVK L + Q E +FL+E L++S H N+V
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 134 LIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTP---EMKPLDWNTRMKIAAGAARGLEYLH 190
IG + R ++ E M G L+ L P + L + +A A G +YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 191 NKADPPVIYRDLKAGNILL---GKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAP 247
I+RD+ A N LL G G K+ DFG+A+ M + P
Sbjct: 159 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 215
Query: 248 EYATTGKLTAKSDIFSFGVVLLELIT 273
E G T+K+D +SFGV+L E+ +
Sbjct: 216 EAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 96/206 (46%), Gaps = 15/206 (7%)
Query: 80 LGQGGFGAVYKGKLA-----ETGQVVAVKQLDDT-GFQGEKEFLVEVLMLSLMRHPNLVH 133
LG G FG VY+G+++ + VAVK L + Q E +FL+E L++S H N+V
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 104
Query: 134 LIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTP---EMKPLDWNTRMKIAAGAARGLEYLH 190
IG + R ++ E M G L+ L P + L + +A A G +YL
Sbjct: 105 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 164
Query: 191 NKADPPVIYRDLKAGNILL---GKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAP 247
I+RD+ A N LL G G K+ DFG+A+ M + P
Sbjct: 165 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 221
Query: 248 EYATTGKLTAKSDIFSFGVVLLELIT 273
E G T+K+D +SFGV+L E+ +
Sbjct: 222 EAFMEGIFTSKTDTWSFGVLLWEIFS 247
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 96/206 (46%), Gaps = 15/206 (7%)
Query: 80 LGQGGFGAVYKGKLA-----ETGQVVAVKQLDDT-GFQGEKEFLVEVLMLSLMRHPNLVH 133
LG G FG VY+G+++ + VAVK L + Q E +FL+E L++S H N+V
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 134 LIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTP---EMKPLDWNTRMKIAAGAARGLEYLH 190
IG + R ++ E M G L+ L P + L + +A A G +YL
Sbjct: 98 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 191 NKADPPVIYRDLKAGNILL---GKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAP 247
I+RD+ A N LL G G K+ DFG+A+ M + P
Sbjct: 158 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 214
Query: 248 EYATTGKLTAKSDIFSFGVVLLELIT 273
E G T+K+D +SFGV+L E+ +
Sbjct: 215 EAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 96/206 (46%), Gaps = 15/206 (7%)
Query: 80 LGQGGFGAVYKGKLA-----ETGQVVAVKQLDDT-GFQGEKEFLVEVLMLSLMRHPNLVH 133
LG G FG VY+G+++ + VAVK L + Q E +FL+E L++S H N+V
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 134 LIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTP---EMKPLDWNTRMKIAAGAARGLEYLH 190
IG + R ++ E M G L+ L P + L + +A A G +YL
Sbjct: 113 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 191 NKADPPVIYRDLKAGNILL---GKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAP 247
I+RD+ A N LL G G K+ DFG+A+ M + P
Sbjct: 173 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 229
Query: 248 EYATTGKLTAKSDIFSFGVVLLELIT 273
E G T+K+D +SFGV+L E+ +
Sbjct: 230 EAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 103/228 (45%), Gaps = 29/228 (12%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKLAETGQ-----VVAVKQLDDTGFQGEKEFLVEVL--MLS 124
+N + LG G FG V + G+ VAVK L T EKE L+ L M
Sbjct: 31 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 90
Query: 125 LMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLL-------------GLTPEM---- 167
L +H N+V+L+G C G L++ EY G L + L G PE
Sbjct: 91 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKE 150
Query: 168 --KPLDWNTRMKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKF 225
+PL+ + ++ A+G+ +L +K I+RD+ A N+LL G K+ DFGLA+
Sbjct: 151 DGRPLELRDLLHFSSQVAQGMAFLASKN---CIHRDVAARNVLLTNGHVAKIGDFGLARD 207
Query: 226 GPTGDKSHVSTRVMGTHGYCAPEYATTGKLTAKSDIFSFGVVLLELIT 273
V + APE T +SD++S+G++L E+ +
Sbjct: 208 IMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 255
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 96/206 (46%), Gaps = 15/206 (7%)
Query: 80 LGQGGFGAVYKGKLA-----ETGQVVAVKQLDDT-GFQGEKEFLVEVLMLSLMRHPNLVH 133
LG G FG VY+G+++ + VAVK L + Q E +FL+E L++S H N+V
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 124
Query: 134 LIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTP---EMKPLDWNTRMKIAAGAARGLEYLH 190
IG + R ++ E M G L+ L P + L + +A A G +YL
Sbjct: 125 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 184
Query: 191 NKADPPVIYRDLKAGNILL---GKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAP 247
I+RD+ A N LL G G K+ DFG+A+ M + P
Sbjct: 185 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 241
Query: 248 EYATTGKLTAKSDIFSFGVVLLELIT 273
E G T+K+D +SFGV+L E+ +
Sbjct: 242 EAFMEGIFTSKTDTWSFGVLLWEIFS 267
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 96/206 (46%), Gaps = 15/206 (7%)
Query: 80 LGQGGFGAVYKGKLA-----ETGQVVAVKQLDDT-GFQGEKEFLVEVLMLSLMRHPNLVH 133
LG G FG VY+G+++ + VAVK L + Q E +FL+E L++S H N+V
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 114
Query: 134 LIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTP---EMKPLDWNTRMKIAAGAARGLEYLH 190
IG + R ++ E M G L+ L P + L + +A A G +YL
Sbjct: 115 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 174
Query: 191 NKADPPVIYRDLKAGNILL---GKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAP 247
I+RD+ A N LL G G K+ DFG+A+ M + P
Sbjct: 175 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 231
Query: 248 EYATTGKLTAKSDIFSFGVVLLELIT 273
E G T+K+D +SFGV+L E+ +
Sbjct: 232 EAFMEGIFTSKTDTWSFGVLLWEIFS 257
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 96/206 (46%), Gaps = 15/206 (7%)
Query: 80 LGQGGFGAVYKGKLA-----ETGQVVAVKQLDDT-GFQGEKEFLVEVLMLSLMRHPNLVH 133
LG G FG VY+G+++ + VAVK L + Q E +FL+E L++S H N+V
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 134 LIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTP---EMKPLDWNTRMKIAAGAARGLEYLH 190
IG + R ++ E M G L+ L P + L + +A A G +YL
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 191 NKADPPVIYRDLKAGNILL---GKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAP 247
I+RD+ A N LL G G K+ DFG+A+ M + P
Sbjct: 173 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 229
Query: 248 EYATTGKLTAKSDIFSFGVVLLELIT 273
E G T+K+D +SFGV+L E+ +
Sbjct: 230 EAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 96/206 (46%), Gaps = 15/206 (7%)
Query: 80 LGQGGFGAVYKGKLA-----ETGQVVAVKQLDDT-GFQGEKEFLVEVLMLSLMRHPNLVH 133
LG G FG VY+G+++ + VAVK L + Q E +FL+E L++S H N+V
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 134 LIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTP---EMKPLDWNTRMKIAAGAARGLEYLH 190
IG + R ++ E M G L+ L P + L + +A A G +YL
Sbjct: 90 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 149
Query: 191 NKADPPVIYRDLKAGNILL---GKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAP 247
I+RD+ A N LL G G K+ DFG+A+ M + P
Sbjct: 150 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 206
Query: 248 EYATTGKLTAKSDIFSFGVVLLELIT 273
E G T+K+D +SFGV+L E+ +
Sbjct: 207 EAFMEGIFTSKTDTWSFGVLLWEIFS 232
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 96/206 (46%), Gaps = 15/206 (7%)
Query: 80 LGQGGFGAVYKGKLA-----ETGQVVAVKQLDDT-GFQGEKEFLVEVLMLSLMRHPNLVH 133
LG G FG VY+G+++ + VAVK L + Q E +FL+E L++S H N+V
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 134 LIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTP---EMKPLDWNTRMKIAAGAARGLEYLH 190
IG + R ++ E M G L+ L P + L + +A A G +YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 191 NKADPPVIYRDLKAGNILL---GKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAP 247
I+RD+ A N LL G G K+ DFG+A+ M + P
Sbjct: 159 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKWMPP 215
Query: 248 EYATTGKLTAKSDIFSFGVVLLELIT 273
E G T+K+D +SFGV+L E+ +
Sbjct: 216 EAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 94/203 (46%), Gaps = 8/203 (3%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGF-QGEKEFLV-EVLMLSLMRHPNLVHLIGY 137
+G G +G K + G+++ K+LD + EK+ LV EV +L ++HPN+V
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 138 CAEGTQRLL--VYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKAD- 194
+ T L V EY G L + T E + LD +++ L+ H ++D
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 195 -PPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTG 253
V++RDLK N+ L + KL DFGLA+ + +GT Y +PE
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARI--LNHDEDFAKEFVGTPYYMSPEQMNRM 191
Query: 254 KLTAKSDIFSFGVVLLELITGRP 276
KSDI+S G +L EL P
Sbjct: 192 SYNEKSDIWSLGCLLYELCALMP 214
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 95/203 (46%), Gaps = 8/203 (3%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGF-QGEKEFLV-EVLMLSLMRHPNLVHLIGY 137
+G G +G K + G+++ K+LD + EK+ LV EV +L ++HPN+V
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 138 CAEGTQRLL--VYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKAD- 194
+ T L V EY G L + T E + LD +++ L+ H ++D
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 195 -PPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTG 253
V++RDLK N+ L + KL DFGLA+ + + +GT Y +PE
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARI--LNHDTSFAKAFVGTPYYMSPEQMNRM 191
Query: 254 KLTAKSDIFSFGVVLLELITGRP 276
KSDI+S G +L EL P
Sbjct: 192 SYNEKSDIWSLGCLLYELCALMP 214
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 134/277 (48%), Gaps = 22/277 (7%)
Query: 19 INEDKDSPGPSRIDTVER-QETPARRNTLDDTLSAHENKNKENTFTYRQLVAATDNFKDT 77
+N D +P P+RI + ++ + P + + S E + F R DN
Sbjct: 287 LNSDGYTPEPARITSPDKPRPMPMDTSVFESPFSDPEELKDKKLFLKR------DNLLIA 340
Query: 78 NF-LGQGGFGAVYKG--KLAETGQVVAVKQLDDTGFQGE-KEFLVEVLMLSLMRHPNLVH 133
+ LG G FG+V +G ++ + VA+K L + + +E + E ++ + +P +V
Sbjct: 341 DIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVR 400
Query: 134 LIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKA 193
LIG C + +LV E G L L+G E+ P+ + ++ + G++YL K
Sbjct: 401 LIGVC-QAEALMLVMEMAGGGPLHKFLVGKREEI-PV--SNVAELLHQVSMGMKYLEEKN 456
Query: 194 DPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTH--GYCAPEYAT 251
++R+L A N+LL + K+SDFGL+K D S+ + R G + APE
Sbjct: 457 ---FVHRNLAARNVLLVNRHYAKISDFGLSK-ALGADDSYYTARSAGKWPLKWYAPECIN 512
Query: 252 TGKLTAKSDIFSFGVVLLELIT-GRPAMDDSQGHERM 287
K +++SD++S+GV + E ++ G+ +G E M
Sbjct: 513 FRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVM 549
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 95/209 (45%), Gaps = 12/209 (5%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEF---LVEVLMLSLMRH 128
++FK LG+G F V + T + A+K L+ E + E ++S + H
Sbjct: 37 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 96
Query: 129 PNLVHLIGYCAEGTQRLLVYEYMPLGSLED-HLLGLTPEMKPLDWNTRMKIAAGAARGLE 187
P V L +C + ++L Y L ++ LL ++ D A LE
Sbjct: 97 PFFVKLY-FCFQDDEKL----YFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALE 151
Query: 188 YLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAP 247
YLH K +I+RDLK NILL + H +++DFG AK K + +GT Y +P
Sbjct: 152 YLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 208
Query: 248 EYATTGKLTAKSDIFSFGVVLLELITGRP 276
E T SD+++ G ++ +L+ G P
Sbjct: 209 ELLTEKSACKSSDLWALGCIIYQLVAGLP 237
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 109/218 (50%), Gaps = 19/218 (8%)
Query: 80 LGQGGFGAVYKGKLAETG---QV-VAVKQLDDTGFQGEK-EFLVEVLMLSLMRHPNLVHL 134
+G G FG VYKG L + +V VA+K L + ++ +FL E ++ H N++ L
Sbjct: 52 IGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRL 111
Query: 135 IGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKAD 194
G ++ +++ EYM G+L+ L E L ++ G A G++YL N
Sbjct: 112 EGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLR---GIAAGMKYLANMN- 167
Query: 195 PPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTH---GYCAPEYAT 251
++RDL A NIL+ K+SDFGL++ D + G + APE +
Sbjct: 168 --YVHRDLAARNILVNSNLVCKVSDFGLSRV--LEDDPEATYTTSGGKIPIRWTAPEAIS 223
Query: 252 TGKLTAKSDIFSFGVVLLELIT--GRPAMDDSQGHERM 287
K T+ SD++SFG+V+ E++T RP + S HE M
Sbjct: 224 YRKFTSASDVWSFGIVMWEVMTYGERPYWELSN-HEVM 260
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 102/206 (49%), Gaps = 20/206 (9%)
Query: 75 KDTNFL---GQGGFGAVYKGKLAETGQV-VAVKQLDDTGFQGEKEFLVEVLMLSLMRHPN 130
KD FL G G FG V GK GQ VA+K + + G E EF+ E ++ + H
Sbjct: 8 KDLTFLKELGTGQFGVVKYGKW--RGQYDVAIKMIKE-GSMSEDEFIEEAKVMMNLSHEK 64
Query: 131 LVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLH 190
LV L G C + ++ EYM G L ++L + + +++ +EYL
Sbjct: 65 LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQT---QQLLEMCKDVCEAMEYLE 121
Query: 191 NKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTH---GYCAP 247
+K ++RDL A N L+ K+SDFGL+++ D + S+ +G+ + P
Sbjct: 122 SKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRY--VLDDEYTSS--VGSKFPVRWSPP 174
Query: 248 EYATTGKLTAKSDIFSFGVVLLELIT 273
E K ++KSDI++FGV++ E+ +
Sbjct: 175 EVLMYSKFSSKSDIWAFGVLMWEIYS 200
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 111/226 (49%), Gaps = 14/226 (6%)
Query: 68 VAATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLV-EVLMLSLM 126
++++ FK LG G + VYKG TG VA+K++ +G + E+ ++ +
Sbjct: 1 MSSSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKEL 60
Query: 127 RHPNLVHLIGYCAEGTQRLLVYEYMP---LGSLEDHLLGLTPEMKPLDWNTRMKIAAGAA 183
+H N+V L + LV+E+M ++ +G TP + L+ N
Sbjct: 61 KHENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTP--RGLELNLVKYFQWQLL 118
Query: 184 RGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAK-FGPTGDKSHVSTRVMGTH 242
+GL + H +++RDLK N+L+ K KL DFGLA+ FG + S+ V+ T
Sbjct: 119 QGLAFCHENK---ILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNT--FSSEVV-TL 172
Query: 243 GYCAPEYATTGKLTAKS-DIFSFGVVLLELITGRPAMDDSQGHERM 287
Y AP+ + + S DI+S G +L E+ITG+P + E++
Sbjct: 173 WYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQL 218
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 102/206 (49%), Gaps = 20/206 (9%)
Query: 75 KDTNFL---GQGGFGAVYKGKLAETGQV-VAVKQLDDTGFQGEKEFLVEVLMLSLMRHPN 130
KD FL G G FG V GK GQ VA+K + + G E EF+ E ++ + H
Sbjct: 4 KDLTFLKELGTGQFGVVKYGKW--RGQYDVAIKMIKE-GSMSEDEFIEEAKVMMNLSHEK 60
Query: 131 LVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLH 190
LV L G C + ++ EYM G L ++L + + +++ +EYL
Sbjct: 61 LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQT---QQLLEMCKDVCEAMEYLE 117
Query: 191 NKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTH---GYCAP 247
+K ++RDL A N L+ K+SDFGL+++ D + S+ +G+ + P
Sbjct: 118 SKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRY--VLDDEYTSS--VGSKFPVRWSPP 170
Query: 248 EYATTGKLTAKSDIFSFGVVLLELIT 273
E K ++KSDI++FGV++ E+ +
Sbjct: 171 EVLMYSKFSSKSDIWAFGVLMWEIYS 196
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 96/206 (46%), Gaps = 15/206 (7%)
Query: 80 LGQGGFGAVYKGKLA-----ETGQVVAVKQLDDT-GFQGEKEFLVEVLMLSLMRHPNLVH 133
LG G FG VY+G+++ + VAVK L + Q E +FL+E L++S H N+V
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 115
Query: 134 LIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTP---EMKPLDWNTRMKIAAGAARGLEYLH 190
IG + R ++ E M G L+ L P + L + +A A G +YL
Sbjct: 116 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 175
Query: 191 NKADPPVIYRDLKAGNILL---GKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAP 247
I+RD+ A N LL G G K+ DFG+A+ M + P
Sbjct: 176 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPP 232
Query: 248 EYATTGKLTAKSDIFSFGVVLLELIT 273
E G T+K+D +SFGV+L E+ +
Sbjct: 233 EAFMEGIFTSKTDTWSFGVLLWEIFS 258
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 96/206 (46%), Gaps = 15/206 (7%)
Query: 80 LGQGGFGAVYKGKLA-----ETGQVVAVKQLDDT-GFQGEKEFLVEVLMLSLMRHPNLVH 133
LG G FG VY+G+++ + VAVK L + Q E +FL+E L++S H N+V
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 134 LIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTP---EMKPLDWNTRMKIAAGAARGLEYLH 190
IG + R ++ E M G L+ L P + L + +A A G +YL
Sbjct: 139 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 198
Query: 191 NKADPPVIYRDLKAGNILL---GKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAP 247
I+RD+ A N LL G G K+ DFG+A+ M + P
Sbjct: 199 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPP 255
Query: 248 EYATTGKLTAKSDIFSFGVVLLELIT 273
E G T+K+D +SFGV+L E+ +
Sbjct: 256 EAFMEGIFTSKTDTWSFGVLLWEIFS 281
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 103/207 (49%), Gaps = 13/207 (6%)
Query: 73 NFKDTNFLGQGGFGAVYKGKL---AETGQVVAVKQLDDTGF--QGEKEFLVEVLMLSLMR 127
N +G G FG V G+L ++ VA+K L G+ + ++FL E ++
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK-VGYTEKQRRDFLGEASIMGQFD 104
Query: 128 HPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLE 187
HPN++ L G + ++V E M GSL+ L + + ++ G A G++
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLR---GIASGMK 161
Query: 188 YLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTH-GYCA 246
YL +D ++RDL A NIL+ K+SDFGL++ ++ +TR + +
Sbjct: 162 YL---SDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTS 218
Query: 247 PEYATTGKLTAKSDIFSFGVVLLELIT 273
PE K T+ SD++S+G+VL E+++
Sbjct: 219 PEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 101/228 (44%), Gaps = 23/228 (10%)
Query: 70 ATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVK-----QLDDTGFQGEKEFLVEVLMLS 124
D+F LG+G FG VY + + ++A+K QL+ G E + E+ + S
Sbjct: 12 TIDDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGV--EHQLRREIEIQS 69
Query: 125 LMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAAR 184
+RHPN++ + Y + + L+ E+ P G L L + D A
Sbjct: 70 HLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKEL----QKHGRFDEQRSATFMEELAD 125
Query: 185 GLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVM-GTHG 243
L Y H + VI+RD+K N+L+G K++DFG + P+ + R M GT
Sbjct: 126 ALHYCHERK---VIHRDIKPENLLMGYKGELKIADFGWSVHAPS-----LRRRXMCGTLD 177
Query: 244 YCAPEYATTGKLTAKSDIFSFGVVLLELITGRPAMDD---SQGHERML 288
Y PE K D++ GV+ E + G P D ++ H R++
Sbjct: 178 YLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIV 225
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 98/203 (48%), Gaps = 14/203 (6%)
Query: 75 KDTNFL---GQGGFGAVYKGKLAETGQV-VAVKQLDDTGFQGEKEFLVEVLMLSLMRHPN 130
KD FL G G FG V GK GQ VA+K + + G E EF+ E ++ + H
Sbjct: 24 KDLTFLKELGTGQFGVVKYGKW--RGQYDVAIKMIKE-GSMSEDEFIEEAKVMMNLSHEK 80
Query: 131 LVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLH 190
LV L G C + ++ EYM G L ++L + + +++ +EYL
Sbjct: 81 LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQT---QQLLEMCKDVCEAMEYLE 137
Query: 191 NKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYA 250
+K ++RDL A N L+ K+SDFGL+++ D+ S + PE
Sbjct: 138 SKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRY-VLDDEETSSVGSKFPVRWSPPEVL 193
Query: 251 TTGKLTAKSDIFSFGVVLLELIT 273
K ++KSDI++FGV++ E+ +
Sbjct: 194 MYSKFSSKSDIWAFGVLMWEIYS 216
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 110/216 (50%), Gaps = 25/216 (11%)
Query: 74 FKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGE------KEFLVEVLMLSLMR 127
++ +FLG+G F VYK + T Q+VA+K++ G + E + L E+ +L +
Sbjct: 12 YEKLDFLGEGQFATVYKARDKNTNQIVAIKKI-KLGHRSEAKDGINRTALREIKLLQELS 70
Query: 128 HPNLVHLIGYCAEGTQRLLVYEYMPLG---SLEDHLLGLTPE-MKPLDWNTRMKIAAGAA 183
HPN++ L+ + LV+++M ++D+ L LTP +K T
Sbjct: 71 HPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMT--------L 122
Query: 184 RGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHG 243
+GLEYLH +++RDLK N+LL + KL+DFGLAK + ++++ V T
Sbjct: 123 QGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVV--TRW 177
Query: 244 YCAPEYATTGKLTAKS-DIFSFGVVLLELITGRPAM 278
Y APE ++ D+++ G +L EL+ P +
Sbjct: 178 YRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFL 213
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 101/198 (51%), Gaps = 17/198 (8%)
Query: 80 LGQGGFGAVYKGKLAETGQV-VAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLVHLIGYC 138
LG G FG V GK GQ VAVK + + G E EF E + + HP LV G C
Sbjct: 16 LGSGQFGVVKLGKWK--GQYDVAVKMIKE-GSMSEDEFFQEAQTMMKLSHPKLVKFYGVC 72
Query: 139 AEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVI 198
++ +V EY+ G L ++L ++P + +++ G+ +L + I
Sbjct: 73 SKEYPIYIVTEYISNGCLLNYLRSHGKGLEP---SQLLEMCYDVCEGMAFLESHQ---FI 126
Query: 199 YRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTH---GYCAPEYATTGKL 255
+RDL A N L+ + K+SDFG+ ++ D +VS+ +GT + APE K
Sbjct: 127 HRDLAARNCLVDRDLCVKVSDFGMTRY--VLDDQYVSS--VGTKFPVKWSAPEVFHYFKY 182
Query: 256 TAKSDIFSFGVVLLELIT 273
++KSD+++FG+++ E+ +
Sbjct: 183 SSKSDVWAFGILMWEVFS 200
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 99/206 (48%), Gaps = 20/206 (9%)
Query: 73 NFKDTNFL---GQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHP 129
N K+ L G+G FG V G G VAVK + + + FL E +++ +RH
Sbjct: 10 NMKELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHS 65
Query: 130 NLVHLIGYCAEGTQRL-LVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEY 188
NLV L+G E L +V EYM GSL D+L + L + +K + +EY
Sbjct: 66 NLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSV--LGGDCLLKFSLDVCEAMEY 123
Query: 189 LHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAK-FGPTGDKSHVSTRVMGTHGYCAP 247
L ++RDL A N+L+ + K+SDFGL K T D + + + AP
Sbjct: 124 LEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVK------WTAP 174
Query: 248 EYATTGKLTAKSDIFSFGVVLLELIT 273
E + KSD++SFG++L E+ +
Sbjct: 175 EALREAAFSTKSDVWSFGILLWEIYS 200
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 99/210 (47%), Gaps = 13/210 (6%)
Query: 73 NFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGE--KEFLVEVLMLSLMRHPN 130
N++ +G+G F V + TG+ VAVK +D T ++ EV ++ ++ HPN
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 131 LVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLH 190
+V L LV EY G + D+L+ MK + + + A ++Y H
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVA-HGRMKEKEARAKFRQIVSA---VQYCH 130
Query: 191 NKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYA 250
K +++RDLKA N+LL + K++DFG + G+K G+ Y APE
Sbjct: 131 QKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT---FCGSPPYAAPELF 184
Query: 251 TTGKLTA-KSDIFSFGVVLLELITGRPAMD 279
K + D++S GV+L L++G D
Sbjct: 185 QGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 102/206 (49%), Gaps = 20/206 (9%)
Query: 75 KDTNFL---GQGGFGAVYKGKLAETGQV-VAVKQLDDTGFQGEKEFLVEVLMLSLMRHPN 130
KD FL G G FG V GK GQ VA+K + + G E EF+ E ++ + H
Sbjct: 9 KDLTFLKELGTGQFGVVKYGKW--RGQYDVAIKMIKE-GSMSEDEFIEEAKVMMNLSHEK 65
Query: 131 LVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLH 190
LV L G C + ++ EYM G L ++L + + +++ +EYL
Sbjct: 66 LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQT---QQLLEMCKDVCEAMEYLE 122
Query: 191 NKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTH---GYCAP 247
+K ++RDL A N L+ K+SDFGL+++ D + S+ +G+ + P
Sbjct: 123 SKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRY--VLDDEYTSS--VGSKFPVRWSPP 175
Query: 248 EYATTGKLTAKSDIFSFGVVLLELIT 273
E K ++KSDI++FGV++ E+ +
Sbjct: 176 EVLMYSKFSSKSDIWAFGVLMWEIYS 201
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 104/228 (45%), Gaps = 29/228 (12%)
Query: 72 DNFKDTNFLGQGGFGAVYKGK---LAETGQV--VAVKQLDDTGFQGEKEFLVEVL--MLS 124
+N + LG G FG V +++TG VAVK L + E+E L+ L M
Sbjct: 45 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQ 104
Query: 125 LMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHL-------------------LGLTP 165
L H N+V+L+G C L++EY G L ++L L
Sbjct: 105 LGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEE 164
Query: 166 EMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKF 225
++ L + + A A+G+E+L K+ ++RDL A N+L+ G K+ DFGLA+
Sbjct: 165 DLNVLTFEDLLCFAYQVAKGMEFLEFKS---CVHRDLAARNVLVTHGKVVKICDFGLARD 221
Query: 226 GPTGDKSHVSTRVMGTHGYCAPEYATTGKLTAKSDIFSFGVVLLELIT 273
+ V + APE G T KSD++S+G++L E+ +
Sbjct: 222 IMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 102/206 (49%), Gaps = 20/206 (9%)
Query: 75 KDTNFL---GQGGFGAVYKGKLAETGQV-VAVKQLDDTGFQGEKEFLVEVLMLSLMRHPN 130
KD FL G G FG V GK GQ VA+K + + G E EF+ E ++ + H
Sbjct: 24 KDLTFLKELGTGQFGVVKYGKW--RGQYDVAIKMIKE-GSMSEDEFIEEAKVMMNLSHEK 80
Query: 131 LVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLH 190
LV L G C + ++ EYM G L ++L + + +++ +EYL
Sbjct: 81 LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQT---QQLLEMCKDVCEAMEYLE 137
Query: 191 NKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTH---GYCAP 247
+K ++RDL A N L+ K+SDFGL+++ D + S+ +G+ + P
Sbjct: 138 SKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRY--VLDDEYTSS--VGSKFPVRWSPP 190
Query: 248 EYATTGKLTAKSDIFSFGVVLLELIT 273
E K ++KSDI++FGV++ E+ +
Sbjct: 191 EVLMYSKFSSKSDIWAFGVLMWEIYS 216
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 99/210 (47%), Gaps = 13/210 (6%)
Query: 73 NFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGE--KEFLVEVLMLSLMRHPN 130
N++ +G+G F V + TG+ VAVK +D T ++ EV ++ ++ HPN
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 131 LVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLH 190
+V L LV EY G + D+L+ MK + + + A ++Y H
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVA-HGRMKEKEARAKFRQIVSA---VQYCH 130
Query: 191 NKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYA 250
K +++RDLKA N+LL + K++DFG + G+K G+ Y APE
Sbjct: 131 QKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT---FCGSPPYAAPELF 184
Query: 251 TTGKLTA-KSDIFSFGVVLLELITGRPAMD 279
K + D++S GV+L L++G D
Sbjct: 185 QGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 99/221 (44%), Gaps = 22/221 (9%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKLAETGQ-----VVAVKQLDDTGFQGEKEFLVEVL--MLS 124
+N + LG G FG V + G+ VAVK L T EKE L+ L M
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 125 LMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHL---------LGLTPEMKP---LDW 172
L +H N+V+L+G C G L++ EY G L + L P P L
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSS 165
Query: 173 NTRMKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKS 232
+ ++ A+G+ +L +K I+RD+ A N+LL G K+ DFGLA+
Sbjct: 166 RDLLHFSSQVAQGMAFLASKN---CIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNY 222
Query: 233 HVSTRVMGTHGYCAPEYATTGKLTAKSDIFSFGVVLLELIT 273
V + APE T +SD++S+G++L E+ +
Sbjct: 223 IVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 103/207 (49%), Gaps = 13/207 (6%)
Query: 73 NFKDTNFLGQGGFGAVYKGKL---AETGQVVAVKQLDDTGF--QGEKEFLVEVLMLSLMR 127
N +G G FG V G+L ++ VA+K L G+ + ++FL E ++
Sbjct: 17 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK-VGYTEKQRRDFLGEASIMGQFD 75
Query: 128 HPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLE 187
HPN++ L G + ++V E M GSL+ L + + ++ G A G++
Sbjct: 76 HPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLR---GIASGMK 132
Query: 188 YLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTH-GYCA 246
YL +D ++RDL A NIL+ K+SDFGL++ ++ +TR + +
Sbjct: 133 YL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTS 189
Query: 247 PEYATTGKLTAKSDIFSFGVVLLELIT 273
PE K T+ SD++S+G+VL E+++
Sbjct: 190 PEAIAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 102/206 (49%), Gaps = 20/206 (9%)
Query: 75 KDTNFL---GQGGFGAVYKGKLAETGQV-VAVKQLDDTGFQGEKEFLVEVLMLSLMRHPN 130
KD FL G G FG V GK GQ VA+K + + G E EF+ E ++ + H
Sbjct: 15 KDLTFLKELGTGQFGVVKYGKW--RGQYDVAIKMIKE-GSMSEDEFIEEAKVMMNLSHEK 71
Query: 131 LVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLH 190
LV L G C + ++ EYM G L ++L + + +++ +EYL
Sbjct: 72 LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQT---QQLLEMCKDVCEAMEYLE 128
Query: 191 NKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTH---GYCAP 247
+K ++RDL A N L+ K+SDFGL+++ D + S+ +G+ + P
Sbjct: 129 SKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRY--VLDDEYTSS--VGSKFPVRWSPP 181
Query: 248 EYATTGKLTAKSDIFSFGVVLLELIT 273
E K ++KSDI++FGV++ E+ +
Sbjct: 182 EVLMYSKFSSKSDIWAFGVLMWEIYS 207
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 100/209 (47%), Gaps = 22/209 (10%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNL 131
++ K LG G FG V+ G + +V AVK L G + FL E ++ ++H L
Sbjct: 12 ESIKLVKKLGAGQFGEVWMGYYNNSTKV-AVKTLK-PGTMSVQAFLEEANLMKTLQHDKL 69
Query: 132 VHLIGYCAEGTQRLLVYEYMPLGSLEDHLLG------LTPEMKPLDWNTRMKIAAGAARG 185
V L + ++ E+M GSL D L L P++ + +A A G
Sbjct: 70 VRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKL--------IDFSAQIAEG 121
Query: 186 LEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTR-VMGTHGY 244
+ Y+ K I+RDL+A N+L+ + K++DFGLA+ D + + +
Sbjct: 122 MAYIERKN---YIHRDLRAANVLVSESLMCKIADFGLARV--IEDNEYTAREGAKFPIKW 176
Query: 245 CAPEYATTGKLTAKSDIFSFGVVLLELIT 273
APE G T KS+++SFG++L E++T
Sbjct: 177 TAPEAINFGCFTIKSNVWSFGILLYEIVT 205
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 103/207 (49%), Gaps = 13/207 (6%)
Query: 73 NFKDTNFLGQGGFGAVYKGKL---AETGQVVAVKQLDDTGF--QGEKEFLVEVLMLSLMR 127
N +G G FG V G+L ++ VA+K L G+ + ++FL E ++
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK-VGYTEKQRRDFLGEASIMGQFD 104
Query: 128 HPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLE 187
HPN++ L G + ++V E M GSL+ L + + ++ G A G++
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLR---GIASGMK 161
Query: 188 YLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTH-GYCA 246
YL +D ++RDL A NIL+ K+SDFGL++ ++ +TR + +
Sbjct: 162 YL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTS 218
Query: 247 PEYATTGKLTAKSDIFSFGVVLLELIT 273
PE K T+ SD++S+G+VL E+++
Sbjct: 219 PEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 102/220 (46%), Gaps = 22/220 (10%)
Query: 74 FKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLML-SLMRHPNLV 132
F+ +G G +G VYKG+ +TGQ+ A+K +D TG + E+E E+ ML H N+
Sbjct: 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDE-EEEIKQEINMLKKYSHHRNIA 84
Query: 133 HLIGYCAEGT------QRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGL 186
G + Q LV E+ GS+ D + +W I RGL
Sbjct: 85 TYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAY--ICREILRGL 142
Query: 187 EYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGL-AKFGPTGDKSHVSTRVMGTHGYC 245
+LH VI+RD+K N+LL + KL DFG+ A+ T + + +GT +
Sbjct: 143 SHLHQHK---VIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNT---FIGTPYWM 196
Query: 246 APEYATTGK-----LTAKSDIFSFGVVLLELITGRPAMDD 280
APE + KSD++S G+ +E+ G P + D
Sbjct: 197 APEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCD 236
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 103/216 (47%), Gaps = 26/216 (12%)
Query: 80 LGQGGFGAVYKGKLA-------ETGQVVAVKQLDDTGFQGEKEFLV-EVLMLSLM-RHPN 130
LG+G FG V + + VAVK L D + + LV E+ M+ ++ +H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 131 LVHLIGYCAEGTQRLLVYEYMPLGSLEDHL-------------LGLTPEMKPLDWNTRMK 177
++HL+G C + ++ EY G+L ++L + PE + + + +
Sbjct: 103 IIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPE-EQMTFKDLVS 161
Query: 178 IAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTR 237
ARG+EYL A I+RDL A N+L+ + K++DFGLA+ D +T
Sbjct: 162 CTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 238 VMGTHGYCAPEYATTGKLTAKSDIFSFGVVLLELIT 273
+ APE T +SD++SFGV++ E+ T
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 104/221 (47%), Gaps = 26/221 (11%)
Query: 66 QLVAATDNFKD--TNFL--GQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVL 121
QLV + + ++ NF+ G+G G V TG+ VAVK++D Q + EV+
Sbjct: 35 QLVVSPGDPREYLANFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVV 94
Query: 122 MLSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMK---- 177
++ H N+V + G + +V E++ G+L D + +TRM
Sbjct: 95 IMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGALTD-----------IVTHTRMNEEQI 143
Query: 178 --IAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVS 235
+ R L YLHN+ VI+RD+K+ +ILL KLSDFG +
Sbjct: 144 ATVCLSVLRALSYLHNQG---VIHRDIKSDSILLTSDGRIKLSDFGFC--AQVSKEVPKR 198
Query: 236 TRVMGTHGYCAPEYATTGKLTAKSDIFSFGVVLLELITGRP 276
++GT + APE + + DI+S G++++E+I G P
Sbjct: 199 KXLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEP 239
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 98/210 (46%), Gaps = 13/210 (6%)
Query: 73 NFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGE--KEFLVEVLMLSLMRHPN 130
N++ +G+G F V + TG+ VAVK +D T ++ EV ++ ++ HPN
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 131 LVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLH 190
+V L LV EY G + D+L+ MK + + + A ++Y H
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVA-HGRMKEKEARAKFRQIVSA---VQYCH 130
Query: 191 NKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYA 250
K +++RDLKA N+LL + K++DFG + G+K G Y APE
Sbjct: 131 QKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDA---FCGAPPYAAPELF 184
Query: 251 TTGKLTA-KSDIFSFGVVLLELITGRPAMD 279
K + D++S GV+L L++G D
Sbjct: 185 QGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 99/210 (47%), Gaps = 13/210 (6%)
Query: 73 NFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGE--KEFLVEVLMLSLMRHPN 130
N++ +G+G F V + TG+ VAV+ +D T ++ EV ++ ++ HPN
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 131 LVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLH 190
+V L LV EY G + D+L+ MK + + + A ++Y H
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVA-HGRMKEKEARAKFRQIVSA---VQYCH 130
Query: 191 NKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYA 250
K +++RDLKA N+LL + K++DFG + G+K G+ Y APE
Sbjct: 131 QKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK---LDEFCGSPPYAAPELF 184
Query: 251 TTGKLTA-KSDIFSFGVVLLELITGRPAMD 279
K + D++S GV+L L++G D
Sbjct: 185 QGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 99/210 (47%), Gaps = 13/210 (6%)
Query: 73 NFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGE--KEFLVEVLMLSLMRHPN 130
N++ +G+G F V + TG+ VAV+ +D T ++ EV ++ ++ HPN
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 131 LVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLH 190
+V L LV EY G + D+L+ MK + + + A ++Y H
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVA-HGRMKEKEARAKFRQIVSA---VQYCH 130
Query: 191 NKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYA 250
K +++RDLKA N+LL + K++DFG + G+K G+ Y APE
Sbjct: 131 QKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT---FCGSPPYAAPELF 184
Query: 251 TTGKLTA-KSDIFSFGVVLLELITGRPAMD 279
K + D++S GV+L L++G D
Sbjct: 185 QGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 101/228 (44%), Gaps = 23/228 (10%)
Query: 70 ATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVK-----QLDDTGFQGEKEFLVEVLMLS 124
D+F LG+G FG VY + + ++A+K QL+ G E + E+ + S
Sbjct: 13 TIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGV--EHQLRREIEIQS 70
Query: 125 LMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAAR 184
+RHPN++ + Y + + L+ E+ P G L L + D A
Sbjct: 71 HLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKEL----QKHGRFDEQRSATFMEELAD 126
Query: 185 GLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVM-GTHG 243
L Y H + VI+RD+K N+L+G K++DFG + P+ + R M GT
Sbjct: 127 ALHYCHERK---VIHRDIKPENLLMGYKGELKIADFGWSVHAPS-----LRRRXMCGTLD 178
Query: 244 YCAPEYATTGKLTAKSDIFSFGVVLLELITGRPAMDD---SQGHERML 288
Y PE K D++ GV+ E + G P D ++ H R++
Sbjct: 179 YLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIV 226
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 106/223 (47%), Gaps = 40/223 (17%)
Query: 80 LGQGGFGAVYKGKLAETGQV----------VAVKQL-DDTGFQGEKEFLVEVLMLSLM-R 127
LG+G FG V LAE + VAVK L D + + + E+ M+ ++ +
Sbjct: 36 LGEGAFGQVV---LAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 92
Query: 128 HPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHL---------LGLTPEMKP---LDWNTR 175
H N+++L+G C + ++ EY G+L ++L P P L
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDL 152
Query: 176 MKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVS 235
+ A ARG+EYL +K I+RDL A N+L+ + K++DFGLA+ D H+
Sbjct: 153 VSCAYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLAR-----DIHHID 204
Query: 236 TRVMGTHG-----YCAPEYATTGKLTAKSDIFSFGVVLLELIT 273
T+G + APE T +SD++SFGV+L E+ T
Sbjct: 205 XXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 101/228 (44%), Gaps = 23/228 (10%)
Query: 70 ATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVK-----QLDDTGFQGEKEFLVEVLMLS 124
D+F LG+G FG VY + + ++A+K QL+ G E + E+ + S
Sbjct: 12 TIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGV--EHQLRREIEIQS 69
Query: 125 LMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAAR 184
+RHPN++ + Y + + L+ E+ P G L L + D A
Sbjct: 70 HLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKEL----QKHGRFDEQRSATFMEELAD 125
Query: 185 GLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVM-GTHG 243
L Y H + VI+RD+K N+L+G K++DFG + P+ + R M GT
Sbjct: 126 ALHYCHERK---VIHRDIKPENLLMGYKGELKIADFGWSVHAPS-----LRRRXMCGTLD 177
Query: 244 YCAPEYATTGKLTAKSDIFSFGVVLLELITGRPAMDD---SQGHERML 288
Y PE K D++ GV+ E + G P D ++ H R++
Sbjct: 178 YLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIV 225
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 99/210 (47%), Gaps = 20/210 (9%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEK---EFLVEVLMLSLMRHPNLVHLIG 136
LG G FG V G+ TG VAVK L+ + + E+ L L RHP+++ L
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 137 YCAEGTQRLLVYEYMPLGSLEDHLL--GLTPEMKPLDWNTRMKIAAGAARGLEYLHNKAD 194
+ T +V EY+ G L D++ G EM+ ++ ++Y H
Sbjct: 79 VISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEA------RRLFQQILSAVDYCHRHM- 131
Query: 195 PPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTGK 254
V++RDLK N+LL + K++DFGL+ G+ S G+ Y APE +G+
Sbjct: 132 --VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSC---GSPNYAAPE-VISGR 185
Query: 255 LTA--KSDIFSFGVVLLELITGRPAMDDSQ 282
L A + DI+S GV+L L+ G DD
Sbjct: 186 LYAGPEVDIWSCGVILYALLCGTLPFDDEH 215
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 99/210 (47%), Gaps = 13/210 (6%)
Query: 73 NFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGE--KEFLVEVLMLSLMRHPN 130
N++ +G+G F V + TG+ VAVK +D T ++ EV ++ ++ HPN
Sbjct: 8 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 67
Query: 131 LVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLH 190
+V L LV EY G + D+L+ MK + + + A ++Y H
Sbjct: 68 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVA-HGWMKEKEARAKFRQIVSA---VQYCH 123
Query: 191 NKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYA 250
K +++RDLKA N+LL + K++DFG + G+K G+ Y APE
Sbjct: 124 QKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT---FCGSPPYAAPELF 177
Query: 251 TTGKLTA-KSDIFSFGVVLLELITGRPAMD 279
K + D++S GV+L L++G D
Sbjct: 178 QGKKYDGPEVDVWSLGVILYTLVSGSLPFD 207
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 99/210 (47%), Gaps = 13/210 (6%)
Query: 73 NFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQ--GEKEFLVEVLMLSLMRHPN 130
N++ +G+G F V + TG+ VA+K +D T ++ EV ++ ++ HPN
Sbjct: 13 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPN 72
Query: 131 LVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLH 190
+V L L+ EY G + D+L+ MK + ++ + A ++Y H
Sbjct: 73 IVKLFEVIETEKTLYLIMEYASGGEVFDYLVA-HGRMKEKEARSKFRQIVSA---VQYCH 128
Query: 191 NKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYA 250
K +++RDLKA N+LL + K++DFG + G K G+ Y APE
Sbjct: 129 QKR---IVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDT---FCGSPPYAAPELF 182
Query: 251 TTGKLTA-KSDIFSFGVVLLELITGRPAMD 279
K + D++S GV+L L++G D
Sbjct: 183 QGKKYDGPEVDVWSLGVILYTLVSGSLPFD 212
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 72/205 (35%), Positives = 95/205 (46%), Gaps = 22/205 (10%)
Query: 80 LGQGGFGAVYKGKL-AETGQVV--AVKQLD-DTGFQGEK--EFLVEVLMLSLMRHPNLVH 133
LG G FG V +G+ A +G+ V AVK L D Q E +F+ EV + + H NL+
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 134 LIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKA 193
L G ++ V E PLGSL D L T + A A G+ YL +K
Sbjct: 80 LYGVVLTPPMKM-VTELAPLGSLLDRL---RKHQGHFLLGTLSRYAVQVAEGMGYLESKR 135
Query: 194 DPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTH-----GYCAPE 248
I+RDL A N+LL K+ DFGL + P D + VM H +CAPE
Sbjct: 136 ---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHY----VMQEHRKVPFAWCAPE 188
Query: 249 YATTGKLTAKSDIFSFGVVLLELIT 273
T + SD + FGV L E+ T
Sbjct: 189 SLKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 99/219 (45%), Gaps = 20/219 (9%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKLAETGQ-----VVAVKQLDDTGFQGEKEFLVEVL--MLS 124
+N + LG G FG V + G+ VAVK L T EKE L+ L M
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 125 LMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHL------LGLTPEM----KPLDWNT 174
L +H N+V+L+G C G L++ EY G L + L L P L
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRD 165
Query: 175 RMKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHV 234
+ ++ A+G+ +L +K I+RD+ A N+LL G K+ DFGLA+ V
Sbjct: 166 LLHFSSQVAQGMAFLASKN---CIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIV 222
Query: 235 STRVMGTHGYCAPEYATTGKLTAKSDIFSFGVVLLELIT 273
+ APE T +SD++S+G++L E+ +
Sbjct: 223 KGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 98/210 (46%), Gaps = 13/210 (6%)
Query: 73 NFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQ--GEKEFLVEVLMLSLMRHPN 130
N++ +G+G F V + TG+ VA+K +D T ++ EV ++ ++ HPN
Sbjct: 16 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPN 75
Query: 131 LVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLH 190
+V L L+ EY G + D+L+ MK + ++ + A ++Y H
Sbjct: 76 IVKLFEVIETEKTLYLIMEYASGGEVFDYLVA-HGRMKEKEARSKFRQIVSA---VQYCH 131
Query: 191 NKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYA 250
K +++RDLKA N+LL + K++DFG + G K G Y APE
Sbjct: 132 QKR---IVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDA---FCGAPPYAAPELF 185
Query: 251 TTGKLTA-KSDIFSFGVVLLELITGRPAMD 279
K + D++S GV+L L++G D
Sbjct: 186 QGKKYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 98/202 (48%), Gaps = 13/202 (6%)
Query: 78 NFLGQGGFGAVYKGKLAETGQV---VAVKQLDDTGF--QGEKEFLVEVLMLSLMRHPNLV 132
+G G G V G+L GQ VA+K L G+ + ++FL E ++ HPN++
Sbjct: 55 KIIGSGDSGEVCYGRLRVPGQRDVPVAIKALK-AGYTERQRRDFLSEASIMGQFDHPNII 113
Query: 133 HLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNK 192
L G G ++V EYM GSL+ L + + ++ G G+ YL
Sbjct: 114 RLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLR---GVGAGMRYL--- 167
Query: 193 ADPPVIYRDLKAGNILLGKGFHPKLSDFGLAK-FGPTGDKSHVSTRVMGTHGYCAPEYAT 251
+D ++RDL A N+L+ K+SDFGL++ D ++ +T + APE
Sbjct: 168 SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIA 227
Query: 252 TGKLTAKSDIFSFGVVLLELIT 273
++ SD++SFGVV+ E++
Sbjct: 228 FRTFSSASDVWSFGVVMWEVLA 249
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 111/215 (51%), Gaps = 19/215 (8%)
Query: 68 VAATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLD-DTGFQGEKEFLV-EVLMLSL 125
+ + +NF+ +G+G +G VYK + TG+VVA+K++ DT +G + E+ +L
Sbjct: 2 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 61
Query: 126 MRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHL--LGLTPEMKPLDWNTRMKIAAGAA 183
+ HPN+V L+ + LV+E++ + L+D + LT PL + ++
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEFLSM-DLKDFMDASALTGIPLPLIKSYLFQL----L 116
Query: 184 RGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAK-FG-PTGDKSHVSTRVMGT 241
+GL + H+ V++RDLK N+L+ KL+DFGLA+ FG P H T
Sbjct: 117 QGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----T 169
Query: 242 HGYCAPEYATTGKLTAKS-DIFSFGVVLLELITGR 275
Y APE K + + DI+S G + E++T R
Sbjct: 170 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 93/194 (47%), Gaps = 19/194 (9%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLVHLIGYCA 139
LG G FG V+ + +V AVK + G + FL E ++ ++H LV L
Sbjct: 190 LGAGQFGEVWMATYNKHTKV-AVKTMK-PGSMSVEAFLAEANVMKTLQHDKLVKLHAVVT 247
Query: 140 EGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIY 199
+ ++ E+M GSL D L +PL + +A A G+ ++ + I+
Sbjct: 248 K-EPIYIITEFMAKGSLLDFLKSDEGSKQPLP--KLIDFSAQIAEGMAFIEQRN---YIH 301
Query: 200 RDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTGKLTAKS 259
RDL+A NIL+ K++DFGLA+ G + APE G T KS
Sbjct: 302 RDLRAANILVSASLVCKIADFGLARVGAKFPIK-----------WTAPEAINFGSFTIKS 350
Query: 260 DIFSFGVVLLELIT 273
D++SFG++L+E++T
Sbjct: 351 DVWSFGILLMEIVT 364
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 111/215 (51%), Gaps = 19/215 (8%)
Query: 68 VAATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLD-DTGFQGEKEFLV-EVLMLSL 125
+ + +NF+ +G+G +G VYK + TG+VVA+K++ DT +G + E+ +L
Sbjct: 1 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 60
Query: 126 MRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHL--LGLTPEMKPLDWNTRMKIAAGAA 183
+ HPN+V L+ + LV+E++ + L+D + LT PL + ++
Sbjct: 61 LNHPNIVKLLDVIHTENKLYLVFEFLSM-DLKDFMDASALTGIPLPLIKSYLFQL----L 115
Query: 184 RGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAK-FG-PTGDKSHVSTRVMGT 241
+GL + H+ V++RDLK N+L+ KL+DFGLA+ FG P H T
Sbjct: 116 QGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----T 168
Query: 242 HGYCAPEYATTGKLTAKS-DIFSFGVVLLELITGR 275
Y APE K + + DI+S G + E++T R
Sbjct: 169 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 106/223 (47%), Gaps = 40/223 (17%)
Query: 80 LGQGGFGAVYKGKLAETGQV----------VAVKQL-DDTGFQGEKEFLVEVLMLSLM-R 127
LG+G FG V LAE + VAVK L D + + + E+ M+ ++ +
Sbjct: 25 LGEGAFGQVV---LAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 81
Query: 128 HPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTR------------ 175
H N+++L+G C + ++ EY G+L ++L P +N
Sbjct: 82 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 141
Query: 176 MKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVS 235
+ A ARG+EYL +K I+RDL A N+L+ + K++DFGLA+ D H+
Sbjct: 142 VSCAYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLAR-----DIHHID 193
Query: 236 TRVMGTHG-----YCAPEYATTGKLTAKSDIFSFGVVLLELIT 273
T+G + APE T +SD++SFGV+L E+ T
Sbjct: 194 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 236
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 111/221 (50%), Gaps = 23/221 (10%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQL----DDTGFQGEKEFLVEVLMLSLMR 127
+ ++ +G+G +G VYK K ++ G++VA+K++ +D G + E+ +L +
Sbjct: 21 EKYQKLEKVGEGTYGVVYKAKDSQ-GRIVALKRIRLDAEDEGIPSTA--IREISLLKELH 77
Query: 128 HPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAA-GAARGL 186
HPN+V LI LV+E+M E L + E K ++++KI RG+
Sbjct: 78 HPNIVSLIDVIHSERCLTLVFEFM-----EKDLKKVLDENKTGLQDSQIKIYLYQLLRGV 132
Query: 187 EYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCA 246
+ H +++RDLK N+L+ KL+DFGLA+ +S+ T + T Y A
Sbjct: 133 AHCHQHR---ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSY--THEVVTLWYRA 187
Query: 247 PEYAT-TGKLTAKSDIFSFGVVLLELITGRP----AMDDSQ 282
P+ + K + DI+S G + E+ITG+P DD Q
Sbjct: 188 PDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQ 228
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/205 (35%), Positives = 95/205 (46%), Gaps = 22/205 (10%)
Query: 80 LGQGGFGAVYKGKL-AETGQVV--AVKQLD-DTGFQGEK--EFLVEVLMLSLMRHPNLVH 133
LG G FG V +G+ A +G+ V AVK L D Q E +F+ EV + + H NL+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 134 LIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKA 193
L G ++ V E PLGSL D L T + A A G+ YL +K
Sbjct: 76 LYGVVLTPPMKM-VTELAPLGSLLDRL---RKHQGHFLLGTLSRYAVQVAEGMGYLESKR 131
Query: 194 DPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTH-----GYCAPE 248
I+RDL A N+LL K+ DFGL + P D + VM H +CAPE
Sbjct: 132 ---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHY----VMQEHRKVPFAWCAPE 184
Query: 249 YATTGKLTAKSDIFSFGVVLLELIT 273
T + SD + FGV L E+ T
Sbjct: 185 SLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 111/221 (50%), Gaps = 23/221 (10%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQL----DDTGFQGEKEFLVEVLMLSLMR 127
+ ++ +G+G +G VYK K ++ G++VA+K++ +D G + E+ +L +
Sbjct: 21 EKYQKLEKVGEGTYGVVYKAKDSQ-GRIVALKRIRLDAEDEGIPSTA--IREISLLKELH 77
Query: 128 HPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAA-GAARGL 186
HPN+V LI LV+E+M E L + E K ++++KI RG+
Sbjct: 78 HPNIVSLIDVIHSERCLTLVFEFM-----EKDLKKVLDENKTGLQDSQIKIYLYQLLRGV 132
Query: 187 EYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCA 246
+ H +++RDLK N+L+ KL+DFGLA+ +S+ T + T Y A
Sbjct: 133 AHCHQHR---ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSY--THEVVTLWYRA 187
Query: 247 PEYAT-TGKLTAKSDIFSFGVVLLELITGRP----AMDDSQ 282
P+ + K + DI+S G + E+ITG+P DD Q
Sbjct: 188 PDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQ 228
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/205 (35%), Positives = 95/205 (46%), Gaps = 22/205 (10%)
Query: 80 LGQGGFGAVYKGKL-AETGQVV--AVKQLD-DTGFQGEK--EFLVEVLMLSLMRHPNLVH 133
LG G FG V +G+ A +G+ V AVK L D Q E +F+ EV + + H NL+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 134 LIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKA 193
L G ++ V E PLGSL D L T + A A G+ YL +K
Sbjct: 76 LYGVVLTPPMKM-VTELAPLGSLLDRL---RKHQGHFLLGTLSRYAVQVAEGMGYLESKR 131
Query: 194 DPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTH-----GYCAPE 248
I+RDL A N+LL K+ DFGL + P D + VM H +CAPE
Sbjct: 132 ---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHY----VMQEHRKVPFAWCAPE 184
Query: 249 YATTGKLTAKSDIFSFGVVLLELIT 273
T + SD + FGV L E+ T
Sbjct: 185 SLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 98/218 (44%), Gaps = 30/218 (13%)
Query: 81 GQGGFGAVYKGKLAETGQVVAVKQL---DDTGFQGEKEFLVEVLMLSLMRHPNLVHLIGY 137
+G FG V+K +L + VAVK D +Q E EV L M+H N++ IG
Sbjct: 33 ARGRFGCVWKAQL--LNEYVAVKIFPIQDKQSWQNE----YEVYSLPGMKHENILQFIGA 86
Query: 138 CAEGTQ----RLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKA 193
GT L+ + GSL D L + + WN IA ARGL YLH
Sbjct: 87 EKRGTSVDVDLWLITAFHEKGSLSDFL-----KANVVSWNELCHIAETMARGLAYLHEDI 141
Query: 194 -------DPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCA 246
P + +RD+K+ N+LL ++DFGLA G + + +GT Y A
Sbjct: 142 PGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMA 201
Query: 247 PEY---ATTGKLTA--KSDIFSFGVVLLELITGRPAMD 279
PE A + A + D+++ G+VL EL + A D
Sbjct: 202 PEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAAD 239
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 106/223 (47%), Gaps = 40/223 (17%)
Query: 80 LGQGGFGAVYKGKLAETGQV----------VAVKQL-DDTGFQGEKEFLVEVLMLSLM-R 127
LG+G FG V LAE + VAVK L D + + + E+ M+ ++ +
Sbjct: 29 LGEGAFGQVV---LAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 85
Query: 128 HPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTR------------ 175
H N+++L+G C + ++ EY G+L ++L P +N
Sbjct: 86 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 145
Query: 176 MKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVS 235
+ A ARG+EYL +K I+RDL A N+L+ + K++DFGLA+ D H+
Sbjct: 146 VSCAYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLAR-----DIHHID 197
Query: 236 TRVMGTHG-----YCAPEYATTGKLTAKSDIFSFGVVLLELIT 273
T+G + APE T +SD++SFGV+L E+ T
Sbjct: 198 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 240
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 100/211 (47%), Gaps = 25/211 (11%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLD-------DTGFQGEKEFLVEVLMLSLMRHPNLV 132
LG+G FG V +T Q VA+K + D + E+E + L L+RHP+++
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVERE----ISYLKLLRHPHII 72
Query: 133 HLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNK 192
L T ++V EY G L D+++ E K + + + +EY H
Sbjct: 73 KLYDVITTPTDIVMVIEYAG-GELFDYIV----EKKRMTEDEGRRFFQQIICAIEYCHRH 127
Query: 193 ADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATT 252
+++RDLK N+LL + K++DFGL+ G+ S G+ Y APE
Sbjct: 128 K---IVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSC---GSPNYAAPE-VIN 180
Query: 253 GKLTA--KSDIFSFGVVLLELITGRPAMDDS 281
GKL A + D++S G+VL ++ GR DD
Sbjct: 181 GKLYAGPEVDVWSCGIVLYVMLVGRLPFDDE 211
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/205 (35%), Positives = 95/205 (46%), Gaps = 22/205 (10%)
Query: 80 LGQGGFGAVYKGKL-AETGQVV--AVKQLD-DTGFQGEK--EFLVEVLMLSLMRHPNLVH 133
LG G FG V +G+ A +G+ V AVK L D Q E +F+ EV + + H NL+
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 134 LIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKA 193
L G ++ V E PLGSL D L T + A A G+ YL +K
Sbjct: 80 LYGVVLTPPMKM-VTELAPLGSLLDRL---RKHQGHFLLGTLSRYAVQVAEGMGYLESKR 135
Query: 194 DPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTH-----GYCAPE 248
I+RDL A N+LL K+ DFGL + P D + VM H +CAPE
Sbjct: 136 ---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHY----VMQEHRKVPFAWCAPE 188
Query: 249 YATTGKLTAKSDIFSFGVVLLELIT 273
T + SD + FGV L E+ T
Sbjct: 189 SLKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 106/223 (47%), Gaps = 40/223 (17%)
Query: 80 LGQGGFGAVYKGKLAETGQV----------VAVKQL-DDTGFQGEKEFLVEVLMLSLM-R 127
LG+G FG V LAE + VAVK L D + + + E+ M+ ++ +
Sbjct: 36 LGEGAFGQVV---LAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 92
Query: 128 HPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTR------------ 175
H N+++L+G C + ++ EY G+L ++L P +N
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDL 152
Query: 176 MKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVS 235
+ A ARG+EYL +K I+RDL A N+L+ + K++DFGLA+ D H+
Sbjct: 153 VSCAYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLAR-----DIHHID 204
Query: 236 TRVMGTHG-----YCAPEYATTGKLTAKSDIFSFGVVLLELIT 273
T+G + APE T +SD++SFGV+L E+ T
Sbjct: 205 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 97/217 (44%), Gaps = 21/217 (9%)
Query: 66 QLVAATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEF---LVEVLM 122
Q A D F+ +G G FG V K ETG A+K LD K+ L E +
Sbjct: 35 QNTAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 123 LSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGA 182
L + P LV L + + +V EYMP G + HL + +P + R AA
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEP---HARF-YAAQI 150
Query: 183 ARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTR---VM 239
EYLH+ +IYRDLK N+L+ + + K++DFG AK V R +
Sbjct: 151 VLTFEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAK--------RVKGRTWXLC 199
Query: 240 GTHGYCAPEYATTGKLTAKSDIFSFGVVLLELITGRP 276
GT Y APE + D ++ GV++ E+ G P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/205 (35%), Positives = 95/205 (46%), Gaps = 22/205 (10%)
Query: 80 LGQGGFGAVYKGKL-AETGQVV--AVKQLD-DTGFQGEK--EFLVEVLMLSLMRHPNLVH 133
LG G FG V +G+ A +G+ V AVK L D Q E +F+ EV + + H NL+
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 134 LIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKA 193
L G ++ V E PLGSL D L T + A A G+ YL +K
Sbjct: 86 LYGVVLTPPMKM-VTELAPLGSLLDRL---RKHQGHFLLGTLSRYAVQVAEGMGYLESKR 141
Query: 194 DPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTH-----GYCAPE 248
I+RDL A N+LL K+ DFGL + P D + VM H +CAPE
Sbjct: 142 ---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHY----VMQEHRKVPFAWCAPE 194
Query: 249 YATTGKLTAKSDIFSFGVVLLELIT 273
T + SD + FGV L E+ T
Sbjct: 195 SLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 102/212 (48%), Gaps = 18/212 (8%)
Query: 76 DTNFL---GQGGFGAVYKGKLAETGQVVAVKQLD-DTGFQGE--KEFLVEVLMLSLMRHP 129
D NFL G+G FG V T ++ A+K L D Q + + +VE +L+L+ P
Sbjct: 20 DFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKP 79
Query: 130 NLVHLIGYCAEGTQRL-LVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEY 188
+ + C + RL V EY+ G L H+ + +P + AA + GL +
Sbjct: 80 PFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEP----QAVFYAAEISIGLFF 135
Query: 189 LHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTR-VMGTHGYCAP 247
LH + +IYRDLK N++L H K++DFG+ K V+TR GT Y AP
Sbjct: 136 LHKRG---IIYRDLKLDNVMLDSEGHIKIADFGMCK---EHMMDGVTTREFCGTPDYIAP 189
Query: 248 EYATTGKLTAKSDIFSFGVVLLELITGRPAMD 279
E D +++GV+L E++ G+P D
Sbjct: 190 EIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFD 221
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 102/219 (46%), Gaps = 20/219 (9%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKLAETGQ-----VVAVKQLDDTGFQGEKEFLVEVL--MLS 124
+N + LG G FG V + G+ VAVK L T EKE L+ L M
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 125 LMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHL------LGLTPEMKPLD--WNTR- 175
L +H N+V+L+G C G L++ EY G L + L L P + +TR
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRD 165
Query: 176 -MKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHV 234
+ ++ A+G+ +L +K I+RD+ A N+LL G K+ DFGLA+ V
Sbjct: 166 LLHFSSQVAQGMAFLASKN---CIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIV 222
Query: 235 STRVMGTHGYCAPEYATTGKLTAKSDIFSFGVVLLELIT 273
+ APE T +SD++S+G++L E+ +
Sbjct: 223 KGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 97/217 (44%), Gaps = 21/217 (9%)
Query: 66 QLVAATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEF---LVEVLM 122
Q A D F+ LG G FG V K ETG A+K LD KE L E +
Sbjct: 35 QNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRI 94
Query: 123 LSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGA 182
L + P LV L + + +V EY P G + HL + +P + R AA
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP---HARF-YAAQI 150
Query: 183 ARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTR---VM 239
EYLH+ +IYRDLK N+++ + + K++DFGLAK V R +
Sbjct: 151 VLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGLAK--------RVKGRTWXLC 199
Query: 240 GTHGYCAPEYATTGKLTAKSDIFSFGVVLLELITGRP 276
GT Y APE + D ++ GV++ E+ G P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 106/223 (47%), Gaps = 40/223 (17%)
Query: 80 LGQGGFGAVYKGKLAETGQV----------VAVKQL-DDTGFQGEKEFLVEVLMLSLM-R 127
LG+G FG V LAE + VAVK L D + + + E+ M+ ++ +
Sbjct: 28 LGEGAFGQVV---LAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 84
Query: 128 HPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTR------------ 175
H N+++L+G C + ++ EY G+L ++L P +N
Sbjct: 85 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 144
Query: 176 MKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVS 235
+ A ARG+EYL +K I+RDL A N+L+ + K++DFGLA+ D H+
Sbjct: 145 VSCAYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLAR-----DIHHID 196
Query: 236 TRVMGTHG-----YCAPEYATTGKLTAKSDIFSFGVVLLELIT 273
T+G + APE T +SD++SFGV+L E+ T
Sbjct: 197 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 239
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 106/223 (47%), Gaps = 40/223 (17%)
Query: 80 LGQGGFGAVYKGKLAETGQV----------VAVKQL-DDTGFQGEKEFLVEVLMLSLM-R 127
LG+G FG V LAE + VAVK L D + + + E+ M+ ++ +
Sbjct: 36 LGEGAFGQVV---LAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 92
Query: 128 HPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTR------------ 175
H N+++L+G C + ++ EY G+L ++L P +N
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 152
Query: 176 MKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVS 235
+ A ARG+EYL +K I+RDL A N+L+ + K++DFGLA+ D H+
Sbjct: 153 VSCAYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLAR-----DIHHID 204
Query: 236 TRVMGTHG-----YCAPEYATTGKLTAKSDIFSFGVVLLELIT 273
T+G + APE T +SD++SFGV+L E+ T
Sbjct: 205 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 97/217 (44%), Gaps = 21/217 (9%)
Query: 66 QLVAATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEF---LVEVLM 122
Q A D F+ +G G FG V K ETG A+K LD K+ L E +
Sbjct: 35 QNTAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 123 LSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGA 182
L + P LV L + + +V EYMP G + HL + +P + R AA
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEP---HARF-YAAQI 150
Query: 183 ARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTR---VM 239
EYLH+ +IYRDLK N+L+ + + K++DFG AK V R +
Sbjct: 151 VLTFEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAK--------RVKGRTWXLC 199
Query: 240 GTHGYCAPEYATTGKLTAKSDIFSFGVVLLELITGRP 276
GT Y APE + D ++ GV++ E+ G P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 103/216 (47%), Gaps = 26/216 (12%)
Query: 80 LGQGGFGAVYKGKLA-------ETGQVVAVKQLDDTGFQGEKEFLV-EVLMLSLM-RHPN 130
LG+G FG V + + VAVK L D + + LV E+ M+ ++ +H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 131 LVHLIGYCAEGTQRLLVYEYMPLGSLEDHL-------------LGLTPEMKPLDWNTRMK 177
+++L+G C + ++ EY G+L ++L + PE + + + +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPE-EQMTFKDLVS 161
Query: 178 IAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTR 237
ARG+EYL A I+RDL A N+L+ + K++DFGLA+ D +T
Sbjct: 162 CTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTN 218
Query: 238 VMGTHGYCAPEYATTGKLTAKSDIFSFGVVLLELIT 273
+ APE T +SD++SFGV++ E+ T
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 103/216 (47%), Gaps = 26/216 (12%)
Query: 80 LGQGGFGAVYKGKLA-------ETGQVVAVKQLDDTGFQGEKEFLV-EVLMLSLM-RHPN 130
LG+G FG V + + VAVK L D + + LV E+ M+ ++ +H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 131 LVHLIGYCAEGTQRLLVYEYMPLGSLEDHL-------------LGLTPEMKPLDWNTRMK 177
+++L+G C + ++ EY G+L ++L + PE + + + +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPE-EQMTFKDLVS 161
Query: 178 IAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTR 237
ARG+EYL A I+RDL A N+L+ + K++DFGLA+ D +T
Sbjct: 162 CTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTN 218
Query: 238 VMGTHGYCAPEYATTGKLTAKSDIFSFGVVLLELIT 273
+ APE T +SD++SFGV++ E+ T
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 105/227 (46%), Gaps = 43/227 (18%)
Query: 80 LGQGGFGAVYK-------GKLAETGQVVAVKQLDDTGFQGE-KEFLVEVLMLSLMRHPNL 131
LG+G FG V K G+ T VAVK L + E ++ L E +L + HP++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYT--TVAVKMLKENASPSELRDLLSEFNVLKQVNHPHV 88
Query: 132 VHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLT--------------------PEMKPLD 171
+ L G C++ LL+ EY GSL L P+ + L
Sbjct: 89 IKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALT 148
Query: 172 WNTRMKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDK 231
+ A ++G++YL A+ +++RDL A NIL+ +G K+SDFGL++ D
Sbjct: 149 MGDLISFAWQISQGMQYL---AEMSLVHRDLAARNILVAEGRKMKISDFGLSR-----DV 200
Query: 232 SHVSTRVMGTHGYCAPEYATTGKL-----TAKSDIFSFGVVLLELIT 273
+ V + G ++ L T +SD++SFGV+L E++T
Sbjct: 201 YEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 99/210 (47%), Gaps = 20/210 (9%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEK---EFLVEVLMLSLMRHPNLVHLIG 136
LG G FG V G+ TG VAVK L+ + + E+ L L RHP+++ L
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 137 YCAEGTQRLLVYEYMPLGSLEDHLL--GLTPEMKPLDWNTRMKIAAGAARGLEYLHNKAD 194
+ T +V EY+ G L D++ G EM+ ++ ++Y H
Sbjct: 79 VISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEA------RRLFQQILSAVDYCHRHM- 131
Query: 195 PPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTGK 254
V++RDLK N+LL + K++DFGL+ G+ S G+ Y APE +G+
Sbjct: 132 --VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSC---GSPNYAAPE-VISGR 185
Query: 255 LTA--KSDIFSFGVVLLELITGRPAMDDSQ 282
L A + DI+S GV+L L+ G DD
Sbjct: 186 LYAGPEVDIWSCGVILYALLCGTLPFDDEH 215
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 99/206 (48%), Gaps = 17/206 (8%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEK--EFLVEVLMLSLMRHPNLVHLIGY 137
+G+G FG K E G+ +K+++ + ++ E EV +L+ M+HPN+V
Sbjct: 32 IGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRES 91
Query: 138 CAEGTQRLLVYEYMPLGSLEDHLLG----LTPEMKPLDWNTRMKIAAGAARGLEYLHNKA 193
E +V +Y G L + L E + LDW ++ +A L+++H
Sbjct: 92 FEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLA------LKHVH--- 142
Query: 194 DPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTG 253
D +++RD+K+ NI L K +L DFG+A+ ++ +GT Y +PE
Sbjct: 143 DRKILHRDIKSQNIFLTKDGTVQLGDFGIARV--LNSTVELARACIGTPYYLSPEICENK 200
Query: 254 KLTAKSDIFSFGVVLLELITGRPAMD 279
KSDI++ G VL EL T + A +
Sbjct: 201 PYNNKSDIWALGCVLYELCTLKHAFE 226
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 105/215 (48%), Gaps = 26/215 (12%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQL----DDTGFQGEKEFLVEVLMLSLMR 127
+ ++ +G+G +G V+K + +TGQ+VA+K+ DD + K L E+ ML ++
Sbjct: 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIK--KIALREIRMLKQLK 60
Query: 128 HPNLVHLIGYCAEGTQRLLVYEYMP---LGSLEDHLLGLTPE--MKPLDWNTRMKIAAGA 182
HPNLV+L+ + LV+EY L L+ + G+ PE +K + W T
Sbjct: 61 HPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGV-PEHLVKSITWQTL------Q 113
Query: 183 ARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTH 242
A + HN I+RD+K NIL+ K KL DFG A+ TG + V T
Sbjct: 114 AVNFCHKHN-----CIHRDVKPENILITKHSVIKLCDFGFARLL-TGPSDYYDDEV-ATR 166
Query: 243 GYCAPEYAT-TGKLTAKSDIFSFGVVLLELITGRP 276
Y +PE + D+++ G V EL++G P
Sbjct: 167 WYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVP 201
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 100/219 (45%), Gaps = 21/219 (9%)
Query: 69 AATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDD-----TGFQGEKEFLVEVLML 123
A N++ LG+G FG V TGQ VA+K ++ + QG E E+ L
Sbjct: 1 AHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIER--EISYL 58
Query: 124 SLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAA 183
L+RHP+++ L + ++V EY + L + + +
Sbjct: 59 RLLRHPHIIKLYDVIKSKDEIIMVIEYA-----GNELFDYIVQRDKMSEQEARRFFQQII 113
Query: 184 RGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHG 243
+EY H +++RDLK N+LL + + K++DFGL+ G+ S G+
Sbjct: 114 SAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GSPN 167
Query: 244 YCAPEYATTGKLTA--KSDIFSFGVVLLELITGRPAMDD 280
Y APE +GKL A + D++S GV+L ++ R DD
Sbjct: 168 YAAPE-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD 205
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/221 (33%), Positives = 101/221 (45%), Gaps = 15/221 (6%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEF---LVEVLMLSLMRH 128
++F LG+G FG V + TG+ A+K L + E + E +L RH
Sbjct: 8 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 67
Query: 129 PNLVHLIGYCAEGTQRL-LVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLE 187
P L L Y + RL V EY G L HL + E + R A LE
Sbjct: 68 PFLTAL-KYAFQTHDRLCFVMEYANGGELFFHL---SRERVFTEERARF-YGAEIVSALE 122
Query: 188 YLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAP 247
YLH++ V+YRD+K N++L K H K++DFGL K G D + + T GT Y AP
Sbjct: 123 YLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEG-ISDGATMKT-FCGTPEYLAP 177
Query: 248 EYATTGKLTAKSDIFSFGVVLLELITGRPAMDDSQGHERML 288
E D + GVV+ E++ GR + Q HER+
Sbjct: 178 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN-QDHERLF 217
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 106/223 (47%), Gaps = 40/223 (17%)
Query: 80 LGQGGFGAVYKGKLAETGQV----------VAVKQL-DDTGFQGEKEFLVEVLMLSLM-R 127
LG+G FG V LAE + VAVK L D + + + E+ M+ ++ +
Sbjct: 77 LGEGAFGQVV---LAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 133
Query: 128 HPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTR------------ 175
H N+++L+G C + ++ EY G+L ++L P +N
Sbjct: 134 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 193
Query: 176 MKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVS 235
+ A ARG+EYL +K I+RDL A N+L+ + K++DFGLA+ D H+
Sbjct: 194 VSCAYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLAR-----DIHHID 245
Query: 236 TRVMGTHG-----YCAPEYATTGKLTAKSDIFSFGVVLLELIT 273
T+G + APE T +SD++SFGV+L E+ T
Sbjct: 246 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 100/219 (45%), Gaps = 21/219 (9%)
Query: 69 AATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDD-----TGFQGEKEFLVEVLML 123
A N++ LG+G FG V TGQ VA+K ++ + QG E E+ L
Sbjct: 11 AHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIER--EISYL 68
Query: 124 SLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAA 183
L+RHP+++ L + ++V EY + L + + +
Sbjct: 69 RLLRHPHIIKLYDVIKSKDEIIMVIEYAG-----NELFDYIVQRDKMSEQEARRFFQQII 123
Query: 184 RGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHG 243
+EY H +++RDLK N+LL + + K++DFGL+ G+ S G+
Sbjct: 124 SAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GSPN 177
Query: 244 YCAPEYATTGKLTA--KSDIFSFGVVLLELITGRPAMDD 280
Y APE +GKL A + D++S GV+L ++ R DD
Sbjct: 178 YAAPE-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD 215
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/221 (33%), Positives = 101/221 (45%), Gaps = 15/221 (6%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEF---LVEVLMLSLMRH 128
++F LG+G FG V + TG+ A+K L + E + E +L RH
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 129 PNLVHLIGYCAEGTQRL-LVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLE 187
P L L Y + RL V EY G L HL + E + R A LE
Sbjct: 65 PFLTAL-KYAFQTHDRLCFVMEYANGGELFFHL---SRERVFTEERARF-YGAEIVSALE 119
Query: 188 YLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAP 247
YLH++ V+YRD+K N++L K H K++DFGL K G D + + T GT Y AP
Sbjct: 120 YLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEG-ISDGATMKT-FCGTPEYLAP 174
Query: 248 EYATTGKLTAKSDIFSFGVVLLELITGRPAMDDSQGHERML 288
E D + GVV+ E++ GR + Q HER+
Sbjct: 175 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN-QDHERLF 214
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 105/227 (46%), Gaps = 43/227 (18%)
Query: 80 LGQGGFGAVYK-------GKLAETGQVVAVKQLDDTGFQGE-KEFLVEVLMLSLMRHPNL 131
LG+G FG V K G+ T VAVK L + E ++ L E +L + HP++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYT--TVAVKMLKENASPSELRDLLSEFNVLKQVNHPHV 88
Query: 132 VHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLT--------------------PEMKPLD 171
+ L G C++ LL+ EY GSL L P+ + L
Sbjct: 89 IKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALT 148
Query: 172 WNTRMKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDK 231
+ A ++G++YL A+ +++RDL A NIL+ +G K+SDFGL++ D
Sbjct: 149 MGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSR-----DV 200
Query: 232 SHVSTRVMGTHGYCAPEYATTGKL-----TAKSDIFSFGVVLLELIT 273
+ V + G ++ L T +SD++SFGV+L E++T
Sbjct: 201 YEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/221 (33%), Positives = 101/221 (45%), Gaps = 15/221 (6%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEF---LVEVLMLSLMRH 128
++F LG+G FG V + TG+ A+K L + E + E +L RH
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 129 PNLVHLIGYCAEGTQRL-LVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLE 187
P L L Y + RL V EY G L HL + E + R A LE
Sbjct: 65 PFLTAL-KYAFQTHDRLCFVMEYANGGELFFHL---SRERVFTEERARF-YGAEIVSALE 119
Query: 188 YLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAP 247
YLH++ V+YRD+K N++L K H K++DFGL K G D + + T GT Y AP
Sbjct: 120 YLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEG-ISDGATMKT-FCGTPEYLAP 174
Query: 248 EYATTGKLTAKSDIFSFGVVLLELITGRPAMDDSQGHERML 288
E D + GVV+ E++ GR + Q HER+
Sbjct: 175 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN-QDHERLF 214
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 100/221 (45%), Gaps = 14/221 (6%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEF---LVEVLMLSLMRH 128
+ F+ LG+G FG V K TG+ A+K L + E L E +L RH
Sbjct: 151 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 210
Query: 129 PNLVHLIGYCAEGTQRL-LVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLE 187
P L L Y + RL V EY G L HL + + A L+
Sbjct: 211 PFLTAL-KYSFQTHDRLCFVMEYANGGELFFHL----SRERVFSEDRARFYGAEIVSALD 265
Query: 188 YLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAP 247
YLH++ + V+YRDLK N++L K H K++DFGL K G D + + T GT Y AP
Sbjct: 266 YLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCKEG-IKDGATMKT-FCGTPEYLAP 321
Query: 248 EYATTGKLTAKSDIFSFGVVLLELITGRPAMDDSQGHERML 288
E D + GVV+ E++ GR + Q HE++
Sbjct: 322 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN-QDHEKLF 361
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 100/219 (45%), Gaps = 21/219 (9%)
Query: 69 AATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDD-----TGFQGEKEFLVEVLML 123
A N++ LG+G FG V TGQ VA+K ++ + QG E E+ L
Sbjct: 10 AHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIER--EISYL 67
Query: 124 SLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAA 183
L+RHP+++ L + ++V EY + L + + +
Sbjct: 68 RLLRHPHIIKLYDVIKSKDEIIMVIEYAG-----NELFDYIVQRDKMSEQEARRFFQQII 122
Query: 184 RGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHG 243
+EY H +++RDLK N+LL + + K++DFGL+ G+ S G+
Sbjct: 123 SAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GSPN 176
Query: 244 YCAPEYATTGKLTA--KSDIFSFGVVLLELITGRPAMDD 280
Y APE +GKL A + D++S GV+L ++ R DD
Sbjct: 177 YAAPE-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD 214
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 100/219 (45%), Gaps = 21/219 (9%)
Query: 69 AATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDD-----TGFQGEKEFLVEVLML 123
A N++ LG+G FG V TGQ VA+K ++ + QG E E+ L
Sbjct: 5 AHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIER--EISYL 62
Query: 124 SLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAA 183
L+RHP+++ L + ++V EY + L + + +
Sbjct: 63 RLLRHPHIIKLYDVIKSKDEIIMVIEYAG-----NELFDYIVQRDKMSEQEARRFFQQII 117
Query: 184 RGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHG 243
+EY H +++RDLK N+LL + + K++DFGL+ G+ S G+
Sbjct: 118 SAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GSPN 171
Query: 244 YCAPEYATTGKLTA--KSDIFSFGVVLLELITGRPAMDD 280
Y APE +GKL A + D++S GV+L ++ R DD
Sbjct: 172 YAAPE-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD 209
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 89/208 (42%), Gaps = 10/208 (4%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEF---LVEVLMLSLMRH 128
++FK LG+G F V + T + A+K L+ E + E ++S + H
Sbjct: 10 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 69
Query: 129 PNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEY 188
P V L + + Y G L L ++ D A LEY
Sbjct: 70 PFFVKLYFTFQDDEKLYFGLSYAKNGEL----LKYIRKIGSFDETCTRFYTAEIVSALEY 125
Query: 189 LHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPE 248
LH K +I+RDLK NILL + H +++DFG AK K + +GT Y +PE
Sbjct: 126 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 182
Query: 249 YATTGKLTAKSDIFSFGVVLLELITGRP 276
T SD+++ G ++ +L+ G P
Sbjct: 183 LLTEKSACKSSDLWALGCIIYQLVAGLP 210
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 96/217 (44%), Gaps = 28/217 (12%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKLAETGQVVAV------KQLDDTGFQG---EKEFLVEVLM 122
D F D LG+GGFG V+ ++ TG++ A + G+QG EK+ L +V
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV-- 242
Query: 123 LSLMRHPNLVHLIGYCAE-GTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAG 181
H + + Y E T LV M G + H+ + + + A
Sbjct: 243 -----HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQ 297
Query: 182 AARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLA---KFGPTGDKSHVSTRV 238
GLE+LH + +IYRDLK N+LL + ++SD GLA K G T K +
Sbjct: 298 IVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA---- 350
Query: 239 MGTHGYCAPEYATTGKLTAKSDIFSFGVVLLELITGR 275
GT G+ APE + D F+ GV L E+I R
Sbjct: 351 -GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 89/208 (42%), Gaps = 10/208 (4%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEF---LVEVLMLSLMRH 128
++FK LG+G F V + T + A+K L+ E + E ++S + H
Sbjct: 9 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 68
Query: 129 PNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEY 188
P V L + + Y G L L ++ D A LEY
Sbjct: 69 PFFVKLYFTFQDDEKLYFGLSYAKNGEL----LKYIRKIGSFDETCTRFYTAEIVSALEY 124
Query: 189 LHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPE 248
LH K +I+RDLK NILL + H +++DFG AK K + +GT Y +PE
Sbjct: 125 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 181
Query: 249 YATTGKLTAKSDIFSFGVVLLELITGRP 276
T SD+++ G ++ +L+ G P
Sbjct: 182 LLTEKSACKSSDLWALGCIIYQLVAGLP 209
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 100/221 (45%), Gaps = 14/221 (6%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEF---LVEVLMLSLMRH 128
+ F+ LG+G FG V K TG+ A+K L + E L E +L RH
Sbjct: 148 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 207
Query: 129 PNLVHLIGYCAEGTQRL-LVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLE 187
P L L Y + RL V EY G L HL + + A L+
Sbjct: 208 PFLTAL-KYSFQTHDRLCFVMEYANGGELFFHL----SRERVFSEDRARFYGAEIVSALD 262
Query: 188 YLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAP 247
YLH++ + V+YRDLK N++L K H K++DFGL K G D + + T GT Y AP
Sbjct: 263 YLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCKEG-IKDGATMKT-FCGTPEYLAP 318
Query: 248 EYATTGKLTAKSDIFSFGVVLLELITGRPAMDDSQGHERML 288
E D + GVV+ E++ GR + Q HE++
Sbjct: 319 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN-QDHEKLF 358
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 96/217 (44%), Gaps = 28/217 (12%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKLAETGQVVAV------KQLDDTGFQG---EKEFLVEVLM 122
D F D LG+GGFG V+ ++ TG++ A + G+QG EK+ L +V
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV-- 242
Query: 123 LSLMRHPNLVHLIGYCAE-GTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAG 181
H + + Y E T LV M G + H+ + + + A
Sbjct: 243 -----HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQ 297
Query: 182 AARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLA---KFGPTGDKSHVSTRV 238
GLE+LH + +IYRDLK N+LL + ++SD GLA K G T K +
Sbjct: 298 IVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA---- 350
Query: 239 MGTHGYCAPEYATTGKLTAKSDIFSFGVVLLELITGR 275
GT G+ APE + D F+ GV L E+I R
Sbjct: 351 -GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 96/217 (44%), Gaps = 28/217 (12%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKLAETGQVVAV------KQLDDTGFQG---EKEFLVEVLM 122
D F D LG+GGFG V+ ++ TG++ A + G+QG EK+ L +V
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV-- 242
Query: 123 LSLMRHPNLVHLIGYCAE-GTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAG 181
H + + Y E T LV M G + H+ + + + A
Sbjct: 243 -----HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQ 297
Query: 182 AARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLA---KFGPTGDKSHVSTRV 238
GLE+LH + +IYRDLK N+LL + ++SD GLA K G T K +
Sbjct: 298 IVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA---- 350
Query: 239 MGTHGYCAPEYATTGKLTAKSDIFSFGVVLLELITGR 275
GT G+ APE + D F+ GV L E+I R
Sbjct: 351 -GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 96/217 (44%), Gaps = 28/217 (12%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKLAETGQVVAV------KQLDDTGFQG---EKEFLVEVLM 122
D F D LG+GGFG V+ ++ TG++ A + G+QG EK+ L +V
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV-- 242
Query: 123 LSLMRHPNLVHLIGYCAE-GTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAG 181
H + + Y E T LV M G + H+ + + + A
Sbjct: 243 -----HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQ 297
Query: 182 AARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLA---KFGPTGDKSHVSTRV 238
GLE+LH + +IYRDLK N+LL + ++SD GLA K G T K +
Sbjct: 298 IVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA---- 350
Query: 239 MGTHGYCAPEYATTGKLTAKSDIFSFGVVLLELITGR 275
GT G+ APE + D F+ GV L E+I R
Sbjct: 351 -GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/205 (35%), Positives = 94/205 (45%), Gaps = 22/205 (10%)
Query: 80 LGQGGFGAVYKGKL-AETGQVV--AVKQLD-DTGFQGEK--EFLVEVLMLSLMRHPNLVH 133
LG G FG V +G+ A +G+ V AVK L D Q E +F+ EV + + H NL+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 134 LIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKA 193
L G ++ V E PLGSL D L T + A A G+ YL +K
Sbjct: 76 LYGVVLTPPMKM-VTELAPLGSLLDRL---RKHQGHFLLGTLSRYAVQVAEGMGYLESKR 131
Query: 194 DPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTH-----GYCAPE 248
I+RDL A N+LL K+ DFGL + P D VM H +CAPE
Sbjct: 132 ---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH----XVMQEHRKVPFAWCAPE 184
Query: 249 YATTGKLTAKSDIFSFGVVLLELIT 273
T + SD + FGV L E+ T
Sbjct: 185 SLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 97/202 (48%), Gaps = 13/202 (6%)
Query: 78 NFLGQGGFGAVYKGKLAETGQV---VAVKQLDDTGF--QGEKEFLVEVLMLSLMRHPNLV 132
+G G G V G+L GQ VA+K L G+ + ++FL E ++ HPN++
Sbjct: 55 KIIGSGDSGEVCYGRLRVPGQRDVPVAIKALK-AGYTERQRRDFLSEASIMGQFDHPNII 113
Query: 133 HLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNK 192
L G G ++V EYM GSL+ L + + ++ G G+ YL
Sbjct: 114 RLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLR---GVGAGMRYL--- 167
Query: 193 ADPPVIYRDLKAGNILLGKGFHPKLSDFGLAK-FGPTGDKSHVSTRVMGTHGYCAPEYAT 251
+D ++RDL A N+L+ K+SDFGL++ D + +T + APE
Sbjct: 168 SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIA 227
Query: 252 TGKLTAKSDIFSFGVVLLELIT 273
++ SD++SFGVV+ E++
Sbjct: 228 FRTFSSASDVWSFGVVMWEVLA 249
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 105/227 (46%), Gaps = 43/227 (18%)
Query: 80 LGQGGFGAVYK-------GKLAETGQVVAVKQLDDTGFQGE-KEFLVEVLMLSLMRHPNL 131
LG+G FG V K G+ T VAVK L + E ++ L E +L + HP++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYT--TVAVKMLKENASPSELRDLLSEFNVLKQVNHPHV 88
Query: 132 VHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLT--------------------PEMKPLD 171
+ L G C++ LL+ EY GSL L P+ + L
Sbjct: 89 IKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALT 148
Query: 172 WNTRMKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDK 231
+ A ++G++YL A+ +++RDL A NIL+ +G K+SDFGL++ D
Sbjct: 149 MGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSR-----DV 200
Query: 232 SHVSTRVMGTHGYCAPEYATTGKL-----TAKSDIFSFGVVLLELIT 273
+ V + G ++ L T +SD++SFGV+L E++T
Sbjct: 201 YEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 89/208 (42%), Gaps = 10/208 (4%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEF---LVEVLMLSLMRH 128
++FK LG+G F V + T + A+K L+ E + E ++S + H
Sbjct: 7 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 66
Query: 129 PNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEY 188
P V L + + Y G L L ++ D A LEY
Sbjct: 67 PFFVKLYFTFQDDEKLYFGLSYAKNGEL----LKYIRKIGSFDETCTRFYTAEIVSALEY 122
Query: 189 LHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPE 248
LH K +I+RDLK NILL + H +++DFG AK K + +GT Y +PE
Sbjct: 123 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 179
Query: 249 YATTGKLTAKSDIFSFGVVLLELITGRP 276
T SD+++ G ++ +L+ G P
Sbjct: 180 LLTEKSACKSSDLWALGCIIYQLVAGLP 207
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 100/216 (46%), Gaps = 22/216 (10%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQL-DDTGFQGEKEFLVEVLMLSLMRHPNLVHLIGYC 138
LG GGFG V + +TG+ VA+KQ + + + + +E+ ++ + HPN+V
Sbjct: 23 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVS-AREV 81
Query: 139 AEGTQRL-------LVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHN 191
+G Q+L L EY G L +L + R + + + L YLH
Sbjct: 82 PDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRT-LLSDISSALRYLHE 140
Query: 192 KADPPVIYRDLKAGNILLGKG----FHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAP 247
+I+RDLK NI+L G H K+ D G AK D+ + T +GT Y AP
Sbjct: 141 NR---IIHRDLKPENIVLQPGPQRLIH-KIIDLGYAK---ELDQGELCTEFVGTLQYLAP 193
Query: 248 EYATTGKLTAKSDIFSFGVVLLELITG-RPAMDDSQ 282
E K T D +SFG + E ITG RP + + Q
Sbjct: 194 ELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQ 229
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 90/208 (43%), Gaps = 10/208 (4%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEF---LVEVLMLSLMRH 128
++FK LG+G F V + T + A+K L+ E + E ++S + H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 129 PNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEY 188
P V L + + Y G L L ++ D A LEY
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGCL----LKYIRKIGSFDETCTRFYTAEIVSALEY 147
Query: 189 LHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPE 248
LH K +I+RDLK NILL + H +++DFG AK K + +GT Y +PE
Sbjct: 148 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPE 204
Query: 249 YATTGKLTAKSDIFSFGVVLLELITGRP 276
T + SD+++ G ++ +L+ G P
Sbjct: 205 LLTEKSASKSSDLWALGCIIYQLVAGLP 232
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 106/223 (47%), Gaps = 40/223 (17%)
Query: 80 LGQGGFGAVYKGKLAETGQV----------VAVKQL-DDTGFQGEKEFLVEVLMLSLM-R 127
LG+G FG V LAE + VAVK L D + + + E+ M+ ++ +
Sbjct: 21 LGEGAFGQVV---LAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 77
Query: 128 HPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLG---------LTPEMKP---LDWNTR 175
H N+++L+G C + ++ EY G+L ++L P P L
Sbjct: 78 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDL 137
Query: 176 MKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVS 235
+ A ARG+EYL +K I+RDL A N+L+ + K++DFGLA+ D H+
Sbjct: 138 VSCAYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLAR-----DIHHID 189
Query: 236 TRVMGTHG-----YCAPEYATTGKLTAKSDIFSFGVVLLELIT 273
T+G + APE T +SD++SFGV+L E+ T
Sbjct: 190 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 89/208 (42%), Gaps = 10/208 (4%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEF---LVEVLMLSLMRH 128
++FK LG+G F V + T + A+K L+ E + E ++S + H
Sbjct: 8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 67
Query: 129 PNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEY 188
P V L + + Y G L L ++ D A LEY
Sbjct: 68 PFFVKLYFTFQDDEKLYFGLSYAKNGEL----LKYIRKIGSFDETCTRFYTAEIVSALEY 123
Query: 189 LHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPE 248
LH K +I+RDLK NILL + H +++DFG AK K + +GT Y +PE
Sbjct: 124 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 180
Query: 249 YATTGKLTAKSDIFSFGVVLLELITGRP 276
T SD+++ G ++ +L+ G P
Sbjct: 181 LLTEKSACKSSDLWALGCIIYQLVAGLP 208
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 101/208 (48%), Gaps = 15/208 (7%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLVHLIGYCA 139
LG G FG V+ + +V AVK + G + FL E ++ ++H LV L
Sbjct: 23 LGAGQFGEVWMATYNKHTKV-AVKTMK-PGSMSVEAFLAEANVMKTLQHDKLVKLHAVVT 80
Query: 140 EGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIY 199
+ ++ E+M GSL D L +PL + +A A G+ ++ + I+
Sbjct: 81 K-EPIYIITEFMAKGSLLDFLKSDEGSKQPLP--KLIDFSAQIAEGMAFIEQRN---YIH 134
Query: 200 RDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTR-VMGTHGYCAPEYATTGKLTAK 258
RDL+A NIL+ K++DFGLA+ D + + + APE G T K
Sbjct: 135 RDLRAANILVSASLVCKIADFGLARV--IEDNEYTAREGAKFPIKWTAPEAINFGSFTIK 192
Query: 259 SDIFSFGVVLLELIT-GR---PAMDDSQ 282
SD++SFG++L+E++T GR P M + +
Sbjct: 193 SDVWSFGILLMEIVTYGRIPYPGMSNPE 220
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 100/216 (46%), Gaps = 22/216 (10%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQL-DDTGFQGEKEFLVEVLMLSLMRHPNLVHLIGYC 138
LG GGFG V + +TG+ VA+KQ + + + + +E+ ++ + HPN+V
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVS-AREV 80
Query: 139 AEGTQRL-------LVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHN 191
+G Q+L L EY G L +L + R + + + L YLH
Sbjct: 81 PDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRT-LLSDISSALRYLHE 139
Query: 192 KADPPVIYRDLKAGNILLGKG----FHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAP 247
+I+RDLK NI+L G H K+ D G AK D+ + T +GT Y AP
Sbjct: 140 NR---IIHRDLKPENIVLQPGPQRLIH-KIIDLGYAK---ELDQGELCTEFVGTLQYLAP 192
Query: 248 EYATTGKLTAKSDIFSFGVVLLELITG-RPAMDDSQ 282
E K T D +SFG + E ITG RP + + Q
Sbjct: 193 ELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQ 228
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 98/218 (44%), Gaps = 29/218 (13%)
Query: 81 GQGGFGAVYKGKLAETGQVVAVKQLDD-TGFQGEKEFLVEVLMLSLMRHPNLVHLIGYCA 139
+G FG V+K +L V + L D +Q E+E + M+H NL+ I
Sbjct: 24 ARGRFGCVWKAQLMNDFVAVKIFPLQDKQSWQSERE----IFSTPGMKHENLLQFIAAEK 79
Query: 140 EGT----QRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKA-- 193
G+ + L+ + GSL D+L G + WN +A +RGL YLH
Sbjct: 80 RGSNLEVELWLITAFHDKGSLTDYLKG-----NIITWNELCHVAETMSRGLSYLHEDVPW 134
Query: 194 ------DPPVIYRDLKAGNILLGKGFHPKLSDFGLA-KFGPTGDKSHVSTRVMGTHGYCA 246
P + +RD K+ N+LL L+DFGLA +F P +V GT Y A
Sbjct: 135 CRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQV-GTRRYMA 193
Query: 247 PEY---ATTGKLTA--KSDIFSFGVVLLELITGRPAMD 279
PE A + A + D+++ G+VL EL++ A D
Sbjct: 194 PEVLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAAD 231
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 89/208 (42%), Gaps = 10/208 (4%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEF---LVEVLMLSLMRH 128
++FK LG+G F V + T + A+K L+ E + E ++S + H
Sbjct: 14 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 73
Query: 129 PNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEY 188
P V L + + Y G L L ++ D A LEY
Sbjct: 74 PFFVKLYFTFQDDEKLYFGLSYAKNGEL----LKYIRKIGSFDETCTRFYTAEIVSALEY 129
Query: 189 LHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPE 248
LH K +I+RDLK NILL + H +++DFG AK K + +GT Y +PE
Sbjct: 130 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 186
Query: 249 YATTGKLTAKSDIFSFGVVLLELITGRP 276
T SD+++ G ++ +L+ G P
Sbjct: 187 LLTEKSACKSSDLWALGCIIYQLVAGLP 214
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/205 (35%), Positives = 94/205 (45%), Gaps = 22/205 (10%)
Query: 80 LGQGGFGAVYKGKL-AETGQVV--AVKQLD-DTGFQGEK--EFLVEVLMLSLMRHPNLVH 133
LG G FG V +G+ A +G+ V AVK L D Q E +F+ EV + + H NL+
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 134 LIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKA 193
L G ++ V E PLGSL D L T + A A G+ YL +K
Sbjct: 86 LYGVVLTPPMKM-VTELAPLGSLLDRL---RKHQGHFLLGTLSRYAVQVAEGMGYLESKR 141
Query: 194 DPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTH-----GYCAPE 248
I+RDL A N+LL K+ DFGL + P D VM H +CAPE
Sbjct: 142 ---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH----XVMQEHRKVPFAWCAPE 194
Query: 249 YATTGKLTAKSDIFSFGVVLLELIT 273
T + SD + FGV L E+ T
Sbjct: 195 SLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 103/216 (47%), Gaps = 26/216 (12%)
Query: 80 LGQGGFGAVYKGKLA-------ETGQVVAVKQL-DDTGFQGEKEFLVEVLMLSLM-RHPN 130
LG+G FG V + + VAVK L DD + + + E+ M+ ++ +H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 131 LVHLIGYCAEGTQRLLVYEYMPLGSLEDHL-------------LGLTPEMKPLDWNTRMK 177
+++L+G C + ++ EY G+L ++L + PE + + + +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPE-EQMTFKDLVS 161
Query: 178 IAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTR 237
ARG+EYL A I+RDL A N+L+ + K++DFGLA+ D +T
Sbjct: 162 CTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 238 VMGTHGYCAPEYATTGKLTAKSDIFSFGVVLLELIT 273
+ APE T +SD++SFGV++ E+ T
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 89/208 (42%), Gaps = 10/208 (4%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEF---LVEVLMLSLMRH 128
++FK LG+G F V + T + A+K L+ E + E ++S + H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 129 PNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEY 188
P V L + + Y G L L ++ D A LEY
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGEL----LKYIRKIGSFDETCTRFYTAEIVSALEY 147
Query: 189 LHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPE 248
LH K +I+RDLK NILL + H +++DFG AK K + +GT Y +PE
Sbjct: 148 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 204
Query: 249 YATTGKLTAKSDIFSFGVVLLELITGRP 276
T SD+++ G ++ +L+ G P
Sbjct: 205 LLTEKSACKSSDLWALGCIIYQLVAGLP 232
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 95/195 (48%), Gaps = 11/195 (5%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLVHLIGYCA 139
LG G FG V+ + +V AVK + G + FL E ++ ++H LV L
Sbjct: 196 LGAGQFGEVWMATYNKHTKV-AVKTMK-PGSMSVEAFLAEANVMKTLQHDKLVKLHAVVT 253
Query: 140 EGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIY 199
+ ++ E+M GSL D L +PL + +A A G+ ++ + I+
Sbjct: 254 K-EPIYIITEFMAKGSLLDFLKSDEGSKQPLP--KLIDFSAQIAEGMAFIEQRN---YIH 307
Query: 200 RDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTR-VMGTHGYCAPEYATTGKLTAK 258
RDL+A NIL+ K++DFGLA+ D + + + APE G T K
Sbjct: 308 RDLRAANILVSASLVCKIADFGLARV--IEDNEYTAREGAKFPIKWTAPEAINFGSFTIK 365
Query: 259 SDIFSFGVVLLELIT 273
SD++SFG++L+E++T
Sbjct: 366 SDVWSFGILLMEIVT 380
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 89/208 (42%), Gaps = 10/208 (4%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEF---LVEVLMLSLMRH 128
++FK LG+G F V + T + A+K L+ E + E ++S + H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 129 PNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEY 188
P V L + + Y G L L ++ D A LEY
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGEL----LKYIRKIGSFDETCTRFYTAEIVSALEY 144
Query: 189 LHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPE 248
LH K +I+RDLK NILL + H +++DFG AK K + +GT Y +PE
Sbjct: 145 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPE 201
Query: 249 YATTGKLTAKSDIFSFGVVLLELITGRP 276
T SD+++ G ++ +L+ G P
Sbjct: 202 LLTEKSACKSSDLWALGCIIYQLVAGLP 229
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 103/216 (47%), Gaps = 26/216 (12%)
Query: 80 LGQGGFGAVYKGKLA-------ETGQVVAVKQLDDTGFQGEKEFLV-EVLMLSLM-RHPN 130
LG+G FG V + + VAVK L D + + LV E+ M+ ++ +H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 131 LVHLIGYCAEGTQRLLVYEYMPLGSLEDHL-------------LGLTPEMKPLDWNTRMK 177
+++L+G C + ++ EY G+L ++L + PE + + + +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPE-EQMTFKDLVS 161
Query: 178 IAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTR 237
ARG+EYL A I+RDL A N+L+ + K++DFGLA+ D +T
Sbjct: 162 CTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTN 218
Query: 238 VMGTHGYCAPEYATTGKLTAKSDIFSFGVVLLELIT 273
+ APE T +SD++SFGV++ E+ T
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 89/208 (42%), Gaps = 10/208 (4%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEF---LVEVLMLSLMRH 128
++FK LG+G F V + T + A+K L+ E + E ++S + H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 129 PNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEY 188
P V L + + Y G L L ++ D A LEY
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGEL----LKYIRKIGSFDETCTRFYTAEIVSALEY 145
Query: 189 LHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPE 248
LH K +I+RDLK NILL + H +++DFG AK K + +GT Y +PE
Sbjct: 146 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 202
Query: 249 YATTGKLTAKSDIFSFGVVLLELITGRP 276
T SD+++ G ++ +L+ G P
Sbjct: 203 LLTEKSACKSSDLWALGCIIYQLVAGLP 230
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 106/223 (47%), Gaps = 40/223 (17%)
Query: 80 LGQGGFGAVYKGKLAETGQV----------VAVKQL-DDTGFQGEKEFLVEVLMLSLM-R 127
LG+G FG V LAE + VAVK L D + + + E+ M+ ++ +
Sbjct: 36 LGEGAFGQVV---LAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 92
Query: 128 HPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLG---------LTPEMKP---LDWNTR 175
H N+++L+G C + ++ EY G+L ++L P P L
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDL 152
Query: 176 MKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVS 235
+ A ARG+EYL +K I+RDL A N+L+ + K++DFGLA+ D H+
Sbjct: 153 VSCAYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLAR-----DIHHID 204
Query: 236 TRVMGTHG-----YCAPEYATTGKLTAKSDIFSFGVVLLELIT 273
T+G + APE T +SD++SFGV+L E+ T
Sbjct: 205 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 89/208 (42%), Gaps = 10/208 (4%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEF---LVEVLMLSLMRH 128
++FK LG+G F V + T + A+K L+ E + E ++S + H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 129 PNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEY 188
P V L + + Y G L L ++ D A LEY
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGEL----LKYIRKIGSFDETCTRFYTAEIVSALEY 147
Query: 189 LHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPE 248
LH K +I+RDLK NILL + H +++DFG AK K + +GT Y +PE
Sbjct: 148 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 204
Query: 249 YATTGKLTAKSDIFSFGVVLLELITGRP 276
T SD+++ G ++ +L+ G P
Sbjct: 205 LLTEKSACKSSDLWALGCIIYQLVAGLP 232
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 89/208 (42%), Gaps = 10/208 (4%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEF---LVEVLMLSLMRH 128
++FK LG+G F V + T + A+K L+ E + E ++S + H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 129 PNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEY 188
P V L + + Y G L L ++ D A LEY
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGEL----LKYIRKIGSFDETCTRFYTAEIVSALEY 148
Query: 189 LHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPE 248
LH K +I+RDLK NILL + H +++DFG AK K + +GT Y +PE
Sbjct: 149 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPE 205
Query: 249 YATTGKLTAKSDIFSFGVVLLELITGRP 276
T SD+++ G ++ +L+ G P
Sbjct: 206 LLTEKSACKSSDLWALGCIIYQLVAGLP 233
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 89/208 (42%), Gaps = 10/208 (4%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEF---LVEVLMLSLMRH 128
++FK LG+G F V + T + A+K L+ E + E ++S + H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 129 PNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEY 188
P V L + + Y G L L ++ D A LEY
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGEL----LKYIRKIGSFDETCTRFYTAEIVSALEY 148
Query: 189 LHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPE 248
LH K +I+RDLK NILL + H +++DFG AK K + +GT Y +PE
Sbjct: 149 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 205
Query: 249 YATTGKLTAKSDIFSFGVVLLELITGRP 276
T SD+++ G ++ +L+ G P
Sbjct: 206 LLTEKSACKSSDLWALGCIIYQLVAGLP 233
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 89/208 (42%), Gaps = 10/208 (4%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEF---LVEVLMLSLMRH 128
++FK LG+G F V + T + A+K L+ E + E ++S + H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 129 PNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEY 188
P V L + + Y G L L ++ D A LEY
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGEL----LKYIRKIGSFDETCTRFYTAEIVSALEY 145
Query: 189 LHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPE 248
LH K +I+RDLK NILL + H +++DFG AK K + +GT Y +PE
Sbjct: 146 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 202
Query: 249 YATTGKLTAKSDIFSFGVVLLELITGRP 276
T SD+++ G ++ +L+ G P
Sbjct: 203 LLTEKSACKSSDLWALGCIIYQLVAGLP 230
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 97/217 (44%), Gaps = 21/217 (9%)
Query: 66 QLVAATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEF---LVEVLM 122
Q A D F+ LG G FG V K ETG A+K LD KE L E +
Sbjct: 35 QNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRI 94
Query: 123 LSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGA 182
L + P LV L + + +V EY P G + HL + +P + R AA
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP---HARF-YAAQI 150
Query: 183 ARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTR---VM 239
EYLH+ +IYRDLK N+++ + + +++DFGLAK V R +
Sbjct: 151 VLTFEYLHS---LDLIYRDLKPENLMIDQQGYIQVTDFGLAK--------RVKGRTWXLC 199
Query: 240 GTHGYCAPEYATTGKLTAKSDIFSFGVVLLELITGRP 276
GT Y APE + D ++ GV++ E+ G P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 89/208 (42%), Gaps = 10/208 (4%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEF---LVEVLMLSLMRH 128
++FK LG+G F V + T + A+K L+ E + E ++S + H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 129 PNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEY 188
P V L + + Y G L L ++ D A LEY
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGEL----LKYIRKIGSFDETCTRFYTAEIVSALEY 145
Query: 189 LHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPE 248
LH K +I+RDLK NILL + H +++DFG AK K + +GT Y +PE
Sbjct: 146 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPE 202
Query: 249 YATTGKLTAKSDIFSFGVVLLELITGRP 276
T SD+++ G ++ +L+ G P
Sbjct: 203 LLTEKSACKSSDLWALGCIIYQLVAGLP 230
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 89/208 (42%), Gaps = 10/208 (4%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEF---LVEVLMLSLMRH 128
++FK LG+G F V + T + A+K L+ E + E ++S + H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 129 PNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEY 188
P V L + + Y G L L ++ D A LEY
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGEL----LKYIRKIGSFDETCTRFYTAEIVSALEY 144
Query: 189 LHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPE 248
LH K +I+RDLK NILL + H +++DFG AK K + +GT Y +PE
Sbjct: 145 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 201
Query: 249 YATTGKLTAKSDIFSFGVVLLELITGRP 276
T SD+++ G ++ +L+ G P
Sbjct: 202 LLTEKSACKSSDLWALGCIIYQLVAGLP 229
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 89/208 (42%), Gaps = 10/208 (4%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEF---LVEVLMLSLMRH 128
++FK LG+G F V + T + A+K L+ E + E ++S + H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 129 PNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEY 188
P V L + + Y G L L ++ D A LEY
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGEL----LKYIRKIGSFDETCTRFYTAEIVSALEY 147
Query: 189 LHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPE 248
LH K +I+RDLK NILL + H +++DFG AK K + +GT Y +PE
Sbjct: 148 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 204
Query: 249 YATTGKLTAKSDIFSFGVVLLELITGRP 276
T SD+++ G ++ +L+ G P
Sbjct: 205 LLTEKSACKSSDLWALGCIIYQLVAGLP 232
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 116/230 (50%), Gaps = 15/230 (6%)
Query: 65 RQLVAATDNFKDTNF-LGQGGFGAVYKG--KLAETGQVVAVKQLDDTGFQGE-KEFLVEV 120
++L DN + LG G FG+V +G ++ + VA+K L + + +E + E
Sbjct: 2 KKLFLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREA 61
Query: 121 LMLSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAA 180
++ + +P +V LIG C + +LV E G L L+G E+ P+ + ++
Sbjct: 62 QIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKREEI-PV--SNVAELLH 117
Query: 181 GAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMG 240
+ G++YL K ++RDL A N+LL + K+SDFGL+K D S+ + R G
Sbjct: 118 QVSMGMKYLEEKN---FVHRDLAARNVLLVNRHYAKISDFGLSK-ALGADDSYYTARSAG 173
Query: 241 TH--GYCAPEYATTGKLTAKSDIFSFGVVLLELIT-GRPAMDDSQGHERM 287
+ APE K +++SD++S+GV + E ++ G+ +G E M
Sbjct: 174 KWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVM 223
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 103/216 (47%), Gaps = 26/216 (12%)
Query: 80 LGQGGFGAVYKGKLA-------ETGQVVAVKQLDDTGFQGEKEFLV-EVLMLSLM-RHPN 130
LG+G FG V + + VAVK L D + + LV E+ M+ ++ +H N
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 131 LVHLIGYCAEGTQRLLVYEYMPLGSLEDHL-------------LGLTPEMKPLDWNTRMK 177
+++L+G C + ++ EY G+L ++L + PE + + + +
Sbjct: 149 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPE-EQMTFKDLVS 207
Query: 178 IAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTR 237
ARG+EYL A I+RDL A N+L+ + K++DFGLA+ D +T
Sbjct: 208 CTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 264
Query: 238 VMGTHGYCAPEYATTGKLTAKSDIFSFGVVLLELIT 273
+ APE T +SD++SFGV++ E+ T
Sbjct: 265 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 97/217 (44%), Gaps = 21/217 (9%)
Query: 66 QLVAATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEF---LVEVLM 122
Q A D F+ LG G FG V K ETG A+K LD K+ L E +
Sbjct: 28 QNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 87
Query: 123 LSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGA 182
L + P LV L + + +V EY+P G + HL + +P + R AA
Sbjct: 88 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEP---HARF-YAAQI 143
Query: 183 ARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTR---VM 239
EYLH+ +IYRDLK N+L+ + + +++DFG AK V R +
Sbjct: 144 VLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLC 192
Query: 240 GTHGYCAPEYATTGKLTAKSDIFSFGVVLLELITGRP 276
GT Y APE + D ++ GV++ E+ G P
Sbjct: 193 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 229
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 89/208 (42%), Gaps = 10/208 (4%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEF---LVEVLMLSLMRH 128
++FK LG+G F V + T + A+K L+ E + E ++S + H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 129 PNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEY 188
P V L + + Y G L L ++ D A LEY
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGEL----LKYIRKIGSFDETCTRFYTAEIVSALEY 147
Query: 189 LHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPE 248
LH K +I+RDLK NILL + H +++DFG AK K + +GT Y +PE
Sbjct: 148 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 204
Query: 249 YATTGKLTAKSDIFSFGVVLLELITGRP 276
T SD+++ G ++ +L+ G P
Sbjct: 205 LLTEKSACKSSDLWALGCIIYQLVAGLP 232
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 99/221 (44%), Gaps = 15/221 (6%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEF---LVEVLMLSLMRH 128
++F LG+G FG V + TG+ A+K L + E + E +L RH
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 129 PNLVHLIGYCAEGTQRL-LVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLE 187
P L L Y + RL V EY G L HL + E + R A LE
Sbjct: 65 PFLTAL-KYAFQTHDRLCFVMEYANGGELFFHL---SRERVFTEERARF-YGAEIVSALE 119
Query: 188 YLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAP 247
YLH++ V+YRD+K N++L K H K++DFGL K G + + GT Y AP
Sbjct: 120 YLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKXFCGTPEYLAP 174
Query: 248 EYATTGKLTAKSDIFSFGVVLLELITGRPAMDDSQGHERML 288
E D + GVV+ E++ GR + Q HER+
Sbjct: 175 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN-QDHERLF 214
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 108/215 (50%), Gaps = 19/215 (8%)
Query: 68 VAATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLD-DTGFQGEKEFLV-EVLMLSL 125
+ + +NF+ +G+G +G VYK + TG+VVA+K++ DT +G + E+ +L
Sbjct: 2 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 61
Query: 126 MRHPNLVHLIGYCAEGTQRLLVYEY--MPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAA 183
+ HPN+V L+ + LV+E+ M L D LT PL + ++
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDA-SALTGIPLPLIKSYLFQL----L 116
Query: 184 RGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAK-FG-PTGDKSHVSTRVMGT 241
+GL + H+ V++RDLK N+L+ KL+DFGLA+ FG P H T
Sbjct: 117 QGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----T 169
Query: 242 HGYCAPEYATTGKLTAKS-DIFSFGVVLLELITGR 275
Y APE K + + DI+S G + E++T R
Sbjct: 170 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 103/216 (47%), Gaps = 26/216 (12%)
Query: 80 LGQGGFGAVYKGKLA-------ETGQVVAVKQLDDTGFQGEKEFLV-EVLMLSLM-RHPN 130
LG+G FG V + + VAVK L D + + LV E+ M+ ++ +H N
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 131 LVHLIGYCAEGTQRLLVYEYMPLGSLEDHL-------------LGLTPEMKPLDWNTRMK 177
+++L+G C + ++ EY G+L ++L + PE + + + +
Sbjct: 90 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPE-EQMTFKDLVS 148
Query: 178 IAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTR 237
ARG+EYL A I+RDL A N+L+ + K++DFGLA+ D +T
Sbjct: 149 CTYQLARGMEYL---ASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 205
Query: 238 VMGTHGYCAPEYATTGKLTAKSDIFSFGVVLLELIT 273
+ APE T +SD++SFGV++ E+ T
Sbjct: 206 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 107/218 (49%), Gaps = 28/218 (12%)
Query: 69 AATDNFKDTNFLGQGGFGAVY---KGKLAETGQVVAVKQL--------DDTGFQGEKEFL 117
A F+ LGQG FG V+ K ++ Q+ A+K L D + E++ L
Sbjct: 21 ADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDIL 80
Query: 118 VEVLMLSLMRHPNLVHL-IGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRM 176
VEV HP +V L + EG + L+ +++ G L L+ E+ + + +
Sbjct: 81 VEV------NHPFIVKLHYAFQTEG-KLYLILDFLRGGDL---FTRLSKEVMFTEEDVKF 130
Query: 177 KIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVST 236
+A A L++LH+ +IYRDLK NILL + H KL+DFGL+K +K S
Sbjct: 131 YLAE-LALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS- 185
Query: 237 RVMGTHGYCAPEYATTGKLTAKSDIFSFGVVLLELITG 274
GT Y APE T +D +SFGV++ E++TG
Sbjct: 186 -FCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 109/213 (51%), Gaps = 19/213 (8%)
Query: 70 ATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLD-DTGFQGEKEFLV-EVLMLSLMR 127
+ +NF+ +G+G +G VYK + TG+VVA+K++ DT +G + E+ +L +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 128 HPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHL--LGLTPEMKPLDWNTRMKIAAGAARG 185
HPN+V L+ + LV+E++ L+D + LT PL + ++ +G
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLH-QDLKDFMDASALTGIPLPLIKSYLFQL----LQG 115
Query: 186 LEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAK-FG-PTGDKSHVSTRVMGTHG 243
L + H+ V++RDLK N+L+ KL+DFGLA+ FG P H T
Sbjct: 116 LAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLW 168
Query: 244 YCAPEYATTGKLTAKS-DIFSFGVVLLELITGR 275
Y APE K + + DI+S G + E++T R
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 103/216 (47%), Gaps = 26/216 (12%)
Query: 80 LGQGGFGAVYKGKLA-------ETGQVVAVKQLDDTGFQGEKEFLV-EVLMLSLM-RHPN 130
LG+G FG V + + VAVK L D + + LV E+ M+ ++ +H N
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 131 LVHLIGYCAEGTQRLLVYEYMPLGSLEDHL-------------LGLTPEMKPLDWNTRMK 177
+++L+G C + ++ EY G+L ++L + PE + + + +
Sbjct: 95 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPE-EQMTFKDLVS 153
Query: 178 IAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTR 237
ARG+EYL A I+RDL A N+L+ + K++DFGLA+ D +T
Sbjct: 154 CTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 210
Query: 238 VMGTHGYCAPEYATTGKLTAKSDIFSFGVVLLELIT 273
+ APE T +SD++SFGV++ E+ T
Sbjct: 211 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 99/221 (44%), Gaps = 15/221 (6%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEF---LVEVLMLSLMRH 128
++F LG+G FG V + TG+ A+K L + E + E +L RH
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 129 PNLVHLIGYCAEGTQRL-LVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLE 187
P L L Y + RL V EY G L HL + E + R A LE
Sbjct: 65 PFLTAL-KYAFQTHDRLCFVMEYANGGELFFHL---SRERVFTEERARF-YGAEIVSALE 119
Query: 188 YLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAP 247
YLH++ V+YRD+K N++L K H K++DFGL K G + + GT Y AP
Sbjct: 120 YLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKXFCGTPEYLAP 174
Query: 248 EYATTGKLTAKSDIFSFGVVLLELITGRPAMDDSQGHERML 288
E D + GVV+ E++ GR + Q HER+
Sbjct: 175 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN-QDHERLF 214
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 89/208 (42%), Gaps = 10/208 (4%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEF---LVEVLMLSLMRH 128
++FK LG+G F V + T + A+K L+ E + E ++S + H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 129 PNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEY 188
P V L + + Y G L L ++ D A LEY
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGEL----LKYIRKIGSFDETCTRFYTAEIVSALEY 147
Query: 189 LHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPE 248
LH K +I+RDLK NILL + H +++DFG AK K + +GT Y +PE
Sbjct: 148 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 204
Query: 249 YATTGKLTAKSDIFSFGVVLLELITGRP 276
T SD+++ G ++ +L+ G P
Sbjct: 205 LLTEKSAXKSSDLWALGCIIYQLVAGLP 232
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 103/216 (47%), Gaps = 26/216 (12%)
Query: 80 LGQGGFGAVYKGKLA-------ETGQVVAVKQLDDTGFQGEKEFLV-EVLMLSLM-RHPN 130
LG+G FG V + + VAVK L D + + LV E+ M+ ++ +H N
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 131 LVHLIGYCAEGTQRLLVYEYMPLGSLEDHL-------------LGLTPEMKPLDWNTRMK 177
+++L+G C + ++ EY G+L ++L + PE + + + +
Sbjct: 92 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPE-EQMTFKDLVS 150
Query: 178 IAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTR 237
ARG+EYL A I+RDL A N+L+ + K++DFGLA+ D +T
Sbjct: 151 CTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 207
Query: 238 VMGTHGYCAPEYATTGKLTAKSDIFSFGVVLLELIT 273
+ APE T +SD++SFGV++ E+ T
Sbjct: 208 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 89/208 (42%), Gaps = 10/208 (4%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEF---LVEVLMLSLMRH 128
++FK LG+G F V + T + A+K L+ E + E ++S + H
Sbjct: 35 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 94
Query: 129 PNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEY 188
P V L + + Y G LL ++ D A LEY
Sbjct: 95 PFFVKLYFTFQDDEKLYFGLSYAKNG----ELLKYIRKIGSFDETCTRFYTAEIVSALEY 150
Query: 189 LHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPE 248
LH K +I+RDLK NILL + H +++DFG AK K + +GT Y +PE
Sbjct: 151 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 207
Query: 249 YATTGKLTAKSDIFSFGVVLLELITGRP 276
T SD+++ G ++ +L+ G P
Sbjct: 208 LLTEKSACKSSDLWALGCIIYQLVAGLP 235
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 107/213 (50%), Gaps = 19/213 (8%)
Query: 70 ATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLD-DTGFQGEKEFLV-EVLMLSLMR 127
+ +NF+ +G+G +G VYK + TG+VVA+K++ DT +G + E+ +L +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 128 HPNLVHLIGYCAEGTQRLLVYEY--MPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARG 185
HPN+V L+ + LV+E+ M L D LT PL + ++ +G
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDA-SALTGIPLPLIKSYLFQL----LQG 116
Query: 186 LEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAK-FG-PTGDKSHVSTRVMGTHG 243
L + H+ V++RDLK N+L+ KL+DFGLA+ FG P H T
Sbjct: 117 LAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLW 169
Query: 244 YCAPEYATTGKLTAKS-DIFSFGVVLLELITGR 275
Y APE K + + DI+S G + E++T R
Sbjct: 170 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 105/209 (50%), Gaps = 15/209 (7%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLD-DTGFQGEKEFLV-EVLMLSLMRHP 129
+NF+ +G+G +G VYK + TG+VVA+K++ DT +G + E+ +L + HP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 130 NLVHLIGYCAEGTQRLLVYEYM--PLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLE 187
N+V L+ + LV+E++ L D LT PL + ++ +GL
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDA-SALTGIPLPLIKSYLFQL----LQGLS 117
Query: 188 YLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAP 247
+ H+ V++RDLK N+L+ KL+DFGLA+ G T + T Y AP
Sbjct: 118 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTLWYRAP 172
Query: 248 EYATTGKLTAKS-DIFSFGVVLLELITGR 275
E K + + DI+S G + E++T R
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 107/218 (49%), Gaps = 28/218 (12%)
Query: 69 AATDNFKDTNFLGQGGFGAVY---KGKLAETGQVVAVKQL--------DDTGFQGEKEFL 117
A F+ LGQG FG V+ K ++ Q+ A+K L D + E++ L
Sbjct: 21 ADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDIL 80
Query: 118 VEVLMLSLMRHPNLVHL-IGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRM 176
VEV HP +V L + EG + L+ +++ G L L+ E+ + + +
Sbjct: 81 VEV------NHPFIVKLHYAFQTEG-KLYLILDFLRGGDL---FTRLSKEVMFTEEDVKF 130
Query: 177 KIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVST 236
+A A L++LH+ +IYRDLK NILL + H KL+DFGL+K +K S
Sbjct: 131 YLAE-LALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS- 185
Query: 237 RVMGTHGYCAPEYATTGKLTAKSDIFSFGVVLLELITG 274
GT Y APE T +D +SFGV++ E++TG
Sbjct: 186 -FCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 97/217 (44%), Gaps = 21/217 (9%)
Query: 66 QLVAATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEF---LVEVLM 122
Q A D F+ LG G FG V K ETG A+K LD K+ L E +
Sbjct: 35 QNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 123 LSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGA 182
L + P LV L + + +V EY+P G + HL + +P + R AA
Sbjct: 95 LQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARF-YAAQI 150
Query: 183 ARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTR---VM 239
EYLH+ +IYRDLK N+L+ + + +++DFG AK V R +
Sbjct: 151 VLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLC 199
Query: 240 GTHGYCAPEYATTGKLTAKSDIFSFGVVLLELITGRP 276
GT Y APE + D ++ GV++ E+ G P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 99/221 (44%), Gaps = 15/221 (6%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEF---LVEVLMLSLMRH 128
++F LG+G FG V + TG+ A+K L + E + E +L RH
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 129 PNLVHLIGYCAEGTQRL-LVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLE 187
P L L Y + RL V EY G L HL + E + R A LE
Sbjct: 65 PFLTAL-KYAFQTHDRLCFVMEYANGGELFFHL---SRERVFTEERARF-YGAEIVSALE 119
Query: 188 YLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAP 247
YLH++ V+YRD+K N++L K H K++DFGL K G + + GT Y AP
Sbjct: 120 YLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKXFCGTPEYLAP 174
Query: 248 EYATTGKLTAKSDIFSFGVVLLELITGRPAMDDSQGHERML 288
E D + GVV+ E++ GR + Q HER+
Sbjct: 175 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN-QDHERLF 214
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 103/216 (47%), Gaps = 26/216 (12%)
Query: 80 LGQGGFGAVYKGKLA-------ETGQVVAVKQLDDTGFQGEKEFLV-EVLMLSLM-RHPN 130
LG+G FG V + + VAVK L D + + LV E+ M+ ++ +H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 131 LVHLIGYCAEGTQRLLVYEYMPLGSLEDHL-------------LGLTPEMKPLDWNTRMK 177
+++L+G C + ++ EY G+L ++L + PE + + + +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPE-EQMTFKDLVS 161
Query: 178 IAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTR 237
ARG+EYL A I+RDL A N+L+ + +++DFGLA+ D +T
Sbjct: 162 CTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTN 218
Query: 238 VMGTHGYCAPEYATTGKLTAKSDIFSFGVVLLELIT 273
+ APE T +SD++SFGV++ E+ T
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 97/217 (44%), Gaps = 21/217 (9%)
Query: 66 QLVAATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEF---LVEVLM 122
Q A D F+ +G G FG V K ETG A+K LD K+ L E +
Sbjct: 35 QNTAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 123 LSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGA 182
L + P LV L + + +V EY+P G + HL + +P + R AA
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARF-YAAQI 150
Query: 183 ARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTR---VM 239
EYLH+ +IYRDLK N+L+ + + K++DFG AK V R +
Sbjct: 151 VLTFEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAK--------RVKGRTWXLC 199
Query: 240 GTHGYCAPEYATTGKLTAKSDIFSFGVVLLELITGRP 276
GT Y APE + D ++ GV++ E+ G P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 99/221 (44%), Gaps = 15/221 (6%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEF---LVEVLMLSLMRH 128
++F LG+G FG V + TG+ A+K L + E + E +L RH
Sbjct: 10 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 69
Query: 129 PNLVHLIGYCAEGTQRL-LVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLE 187
P L L Y + RL V EY G L HL + E + R A LE
Sbjct: 70 PFLTAL-KYAFQTHDRLCFVMEYANGGELFFHL---SRERVFTEERARF-YGAEIVSALE 124
Query: 188 YLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAP 247
YLH++ V+YRD+K N++L K H K++DFGL K G + + GT Y AP
Sbjct: 125 YLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKXFCGTPEYLAP 179
Query: 248 EYATTGKLTAKSDIFSFGVVLLELITGRPAMDDSQGHERML 288
E D + GVV+ E++ GR + Q HER+
Sbjct: 180 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN-QDHERLF 219
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 107/218 (49%), Gaps = 28/218 (12%)
Query: 69 AATDNFKDTNFLGQGGFGAVY---KGKLAETGQVVAVKQL--------DDTGFQGEKEFL 117
A F+ LGQG FG V+ K ++ Q+ A+K L D + E++ L
Sbjct: 22 ADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDIL 81
Query: 118 VEVLMLSLMRHPNLVHL-IGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRM 176
VEV HP +V L + EG + L+ +++ G L L+ E+ + + +
Sbjct: 82 VEV------NHPFIVKLHYAFQTEG-KLYLILDFLRGGDL---FTRLSKEVMFTEEDVKF 131
Query: 177 KIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVST 236
+A A L++LH+ +IYRDLK NILL + H KL+DFGL+K +K S
Sbjct: 132 YLAE-LALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS- 186
Query: 237 RVMGTHGYCAPEYATTGKLTAKSDIFSFGVVLLELITG 274
GT Y APE T +D +SFGV++ E++TG
Sbjct: 187 -FCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 223
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 99/218 (45%), Gaps = 23/218 (10%)
Query: 71 TDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLD-----DTGFQGEKEFLVEVLMLSL 125
+D ++ LG GG V+ + + VAVK L D F F E +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFY--LRFRREAQNAAA 68
Query: 126 MRHPNLVHLI----GYCAEGTQRLLVYEYMPLGSLED--HLLGLTPEMKPLDWNTRMKIA 179
+ HP +V + G +V EY+ +L D H G P+ +++
Sbjct: 69 LNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG------PMTPKRAIEVI 122
Query: 180 AGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAK-FGPTGDKSHVSTRV 238
A A + L + H +I+RD+K NIL+ K+ DFG+A+ +G+ + V
Sbjct: 123 ADACQALNFSHQNG---IIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAV 179
Query: 239 MGTHGYCAPEYATTGKLTAKSDIFSFGVVLLELITGRP 276
+GT Y +PE A + A+SD++S G VL E++TG P
Sbjct: 180 IGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEP 217
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 97/217 (44%), Gaps = 21/217 (9%)
Query: 66 QLVAATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEF---LVEVLM 122
Q A D F+ LG G FG V K ETG A+K LD K+ L E +
Sbjct: 36 QNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 95
Query: 123 LSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGA 182
L + P LV L + + +V EY+P G + HL + +P + R AA
Sbjct: 96 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEP---HARF-YAAQI 151
Query: 183 ARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTR---VM 239
EYLH+ +IYRDLK N+L+ + + +++DFG AK V R +
Sbjct: 152 VLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLC 200
Query: 240 GTHGYCAPEYATTGKLTAKSDIFSFGVVLLELITGRP 276
GT Y APE + D ++ GV++ E+ G P
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 237
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 97/217 (44%), Gaps = 21/217 (9%)
Query: 66 QLVAATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEF---LVEVLM 122
Q A D F+ LG G FG V K ETG A+K LD K+ L E +
Sbjct: 35 QNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 123 LSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGA 182
L + P LV L + + +V EY+P G + HL + +P + R AA
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEP---HARF-YAAQI 150
Query: 183 ARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTR---VM 239
EYLH+ +IYRDLK N+L+ + + +++DFG AK V R +
Sbjct: 151 VLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLC 199
Query: 240 GTHGYCAPEYATTGKLTAKSDIFSFGVVLLELITGRP 276
GT Y APE + D ++ GV++ E+ G P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 97/217 (44%), Gaps = 21/217 (9%)
Query: 66 QLVAATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEF---LVEVLM 122
Q A D F+ LG G FG V K ETG A+K LD K+ L E +
Sbjct: 35 QNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 123 LSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGA 182
L + P LV L + + +V EY+P G + HL + +P + R AA
Sbjct: 95 LQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARF-YAAQI 150
Query: 183 ARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTR---VM 239
EYLH+ +IYRDLK N+L+ + + +++DFG AK V R +
Sbjct: 151 VLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLC 199
Query: 240 GTHGYCAPEYATTGKLTAKSDIFSFGVVLLELITGRP 276
GT Y APE + D ++ GV++ E+ G P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 97/217 (44%), Gaps = 21/217 (9%)
Query: 66 QLVAATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEF---LVEVLM 122
Q A D F+ LG G FG V K ETG A+K LD K+ L E +
Sbjct: 35 QNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 123 LSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGA 182
L + P LV L + + +V EY+P G + HL + +P + R AA
Sbjct: 95 LQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARF-YAAQI 150
Query: 183 ARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTR---VM 239
EYLH+ +IYRDLK N+L+ + + +++DFG AK V R +
Sbjct: 151 VLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLC 199
Query: 240 GTHGYCAPEYATTGKLTAKSDIFSFGVVLLELITGRP 276
GT Y APE + D ++ GV++ E+ G P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 97/217 (44%), Gaps = 21/217 (9%)
Query: 66 QLVAATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEF---LVEVLM 122
Q A D F+ LG G FG V K ETG A+K LD K+ L E +
Sbjct: 35 QNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 123 LSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGA 182
L + P LV L + + +V EY+P G + HL + +P + R AA
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEP---HARF-YAAQI 150
Query: 183 ARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTR---VM 239
EYLH+ +IYRDLK N+L+ + + +++DFG AK V R +
Sbjct: 151 VLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLC 199
Query: 240 GTHGYCAPEYATTGKLTAKSDIFSFGVVLLELITGRP 276
GT Y APE + D ++ GV++ E+ G P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 97/217 (44%), Gaps = 21/217 (9%)
Query: 66 QLVAATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEF---LVEVLM 122
Q A D F+ LG G FG V K ETG A+K LD K+ L E +
Sbjct: 28 QNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 87
Query: 123 LSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGA 182
L + P LV L + + +V EY+P G + HL + +P + R AA
Sbjct: 88 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARF-YAAQI 143
Query: 183 ARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTR---VM 239
EYLH+ +IYRDLK N+L+ + + +++DFG AK V R +
Sbjct: 144 VLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLC 192
Query: 240 GTHGYCAPEYATTGKLTAKSDIFSFGVVLLELITGRP 276
GT Y APE + D ++ GV++ E+ G P
Sbjct: 193 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 229
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 105/209 (50%), Gaps = 15/209 (7%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLD-DTGFQGEKEFLV-EVLMLSLMRHP 129
+NF+ +G+G +G VYK + TG+VVA+K++ DT +G + E+ +L + HP
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 66
Query: 130 NLVHLIGYCAEGTQRLLVYEYM--PLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLE 187
N+V L+ + LV+E++ L D LT PL + ++ +GL
Sbjct: 67 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDA-SALTGIPLPLIKSYLFQL----LQGLA 121
Query: 188 YLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAP 247
+ H+ V++RDLK N+L+ KL+DFGLA+ G T + T Y AP
Sbjct: 122 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTLWYRAP 176
Query: 248 EYATTGKLTAKS-DIFSFGVVLLELITGR 275
E K + + DI+S G + E++T R
Sbjct: 177 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 96/208 (46%), Gaps = 11/208 (5%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGE---KEFLVEVLMLSLMRH 128
+ +K + LG GG VY + VA+K + + E K F EV S + H
Sbjct: 11 ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSH 70
Query: 129 PNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEY 188
N+V +I E LV EY+ +L +++ PL +T + G+++
Sbjct: 71 QNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYI----ESHGPLSVDTAINFTNQILDGIKH 126
Query: 189 LHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPE 248
H D +++RD+K NIL+ K+ DFG+AK + + V+GT Y +PE
Sbjct: 127 AH---DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQ-TNHVLGTVQYFSPE 182
Query: 249 YATTGKLTAKSDIFSFGVVLLELITGRP 276
A +DI+S G+VL E++ G P
Sbjct: 183 QAKGEATDECTDIYSIGIVLYEMLVGEP 210
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 97/217 (44%), Gaps = 21/217 (9%)
Query: 66 QLVAATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEF---LVEVLM 122
Q A D F+ LG G FG V K ETG A+K LD K+ L E +
Sbjct: 36 QNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 95
Query: 123 LSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGA 182
L + P LV L + + +V EY+P G + HL + +P + R AA
Sbjct: 96 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARF-YAAQI 151
Query: 183 ARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTR---VM 239
EYLH+ +IYRDLK N+L+ + + +++DFG AK V R +
Sbjct: 152 VLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLC 200
Query: 240 GTHGYCAPEYATTGKLTAKSDIFSFGVVLLELITGRP 276
GT Y APE + D ++ GV++ E+ G P
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 237
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 106/211 (50%), Gaps = 15/211 (7%)
Query: 70 ATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLD-DTGFQGEKEFLV-EVLMLSLMR 127
+ +NF+ +G+G +G VYK + TG+VVA+K++ DT +G + E+ +L +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 128 HPNLVHLIGYCAEGTQRLLVYEYM--PLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARG 185
HPN+V L+ + LV+E++ L D LT PL + ++ +G
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDA-SALTGIPLPLIKSYLFQL----LQG 116
Query: 186 LEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYC 245
L + H+ V++RDLK N+L+ KL+DFGLA+ G T + T Y
Sbjct: 117 LAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTLWYR 171
Query: 246 APEYATTGKLTAKS-DIFSFGVVLLELITGR 275
APE K + + DI+S G + E++T R
Sbjct: 172 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 105/209 (50%), Gaps = 15/209 (7%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLD-DTGFQGEKEFLV-EVLMLSLMRHP 129
+NF+ +G+G +G VYK + TG+VVA+K++ DT +G + E+ +L + HP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 130 NLVHLIGYCAEGTQRLLVYEYM--PLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLE 187
N+V L+ + LV+E++ L D LT PL + ++ +GL
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDA-SALTGIPLPLIKSYLFQL----LQGLA 117
Query: 188 YLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAP 247
+ H+ V++RDLK N+L+ KL+DFGLA+ G T + T Y AP
Sbjct: 118 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTLWYRAP 172
Query: 248 EYATTGKLTAKS-DIFSFGVVLLELITGR 275
E K + + DI+S G + E++T R
Sbjct: 173 EILLGXKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 102/211 (48%), Gaps = 25/211 (11%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNL 131
DNF +G+G G V + +G++VAVK++D Q + EV+++ +H N+
Sbjct: 154 DNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV 210
Query: 132 VHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRM---KIAA---GAARG 185
V + G + +V E++ G+L D + +TRM +IAA +
Sbjct: 211 VEMYNSYLVGDELWVVMEFLEGGALTD-----------IVTHTRMNEEQIAAVCLAVLQA 259
Query: 186 LEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYC 245
L LH + VI+RD+K+ +ILL KLSDFG + ++GT +
Sbjct: 260 LSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFC--AQVSKEVPRRKXLVGTPYWM 314
Query: 246 APEYATTGKLTAKSDIFSFGVVLLELITGRP 276
APE + + DI+S G++++E++ G P
Sbjct: 315 APELISRLPYGPEVDIWSLGIMVIEMVDGEP 345
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 102/216 (47%), Gaps = 26/216 (12%)
Query: 80 LGQGGFGAVYKGKLA-------ETGQVVAVKQLDDTGFQGEKEFLV-EVLMLSLM-RHPN 130
LG+G FG V + + VAVK L D + + LV E+ M+ ++ +H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 131 LVHLIGYCAEGTQRLLVYEYMPLGSLEDHL-------------LGLTPEMKPLDWNTRMK 177
++ L+G C + ++ EY G+L ++L + PE + + + +
Sbjct: 103 IITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPE-EQMTFKDLVS 161
Query: 178 IAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTR 237
ARG+EYL A I+RDL A N+L+ + K++DFGLA+ D +T
Sbjct: 162 CTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 238 VMGTHGYCAPEYATTGKLTAKSDIFSFGVVLLELIT 273
+ APE T +SD++SFGV++ E+ T
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 105/209 (50%), Gaps = 15/209 (7%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLD-DTGFQGEKEFLV-EVLMLSLMRHP 129
+NF+ +G+G +G VYK + TG+VVA+K++ DT +G + E+ +L + HP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 130 NLVHLIGYCAEGTQRLLVYEYM--PLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLE 187
N+V L+ + LV+E++ L D LT PL + ++ +GL
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDA-SALTGIPLPLIKSYLFQL----LQGLA 117
Query: 188 YLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAP 247
+ H+ V++RDLK N+L+ KL+DFGLA+ G T + T Y AP
Sbjct: 118 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTLWYRAP 172
Query: 248 EYATTGKLTAKS-DIFSFGVVLLELITGR 275
E K + + DI+S G + E++T R
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 105/209 (50%), Gaps = 15/209 (7%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLD-DTGFQGEKEFLV-EVLMLSLMRHP 129
+NF+ +G+G +G VYK + TG+VVA+K++ DT +G + E+ +L + HP
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 130 NLVHLIGYCAEGTQRLLVYEYM--PLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLE 187
N+V L+ + LV+E++ L D LT PL + ++ +GL
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDA-SALTGIPLPLIKSYLFQL----LQGLA 116
Query: 188 YLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAP 247
+ H+ V++RDLK N+L+ KL+DFGLA+ G T + T Y AP
Sbjct: 117 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTLWYRAP 171
Query: 248 EYATTGKLTAKS-DIFSFGVVLLELITGR 275
E K + + DI+S G + E++T R
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 97/217 (44%), Gaps = 21/217 (9%)
Query: 66 QLVAATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEF---LVEVLM 122
Q A D F+ LG G FG V K ETG A+K LD K+ L E +
Sbjct: 36 QNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 95
Query: 123 LSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGA 182
L + P LV L + + +V EY+P G + HL + +P + R AA
Sbjct: 96 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARF-YAAQI 151
Query: 183 ARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTR---VM 239
EYLH+ +IYRDLK N+L+ + + +++DFG AK V R +
Sbjct: 152 VLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLC 200
Query: 240 GTHGYCAPEYATTGKLTAKSDIFSFGVVLLELITGRP 276
GT Y APE + D ++ GV++ E+ G P
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 237
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 97/217 (44%), Gaps = 21/217 (9%)
Query: 66 QLVAATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEF---LVEVLM 122
Q A D F+ LG G FG V K ETG A+K LD K+ L E +
Sbjct: 35 QNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 123 LSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGA 182
L + P LV L + + +V EY+P G + HL + +P + R AA
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARF-YAAQI 150
Query: 183 ARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTR---VM 239
EYLH+ +IYRDLK N+L+ + + +++DFG AK V R +
Sbjct: 151 VLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLC 199
Query: 240 GTHGYCAPEYATTGKLTAKSDIFSFGVVLLELITGRP 276
GT Y APE + D ++ GV++ E+ G P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 97/217 (44%), Gaps = 21/217 (9%)
Query: 66 QLVAATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEF---LVEVLM 122
Q A D F+ LG G FG V K ETG A+K LD K+ L E +
Sbjct: 21 QNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 80
Query: 123 LSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGA 182
L + P LV L + + +V EY+P G + HL + +P + R AA
Sbjct: 81 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARF-YAAQI 136
Query: 183 ARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTR---VM 239
EYLH+ +IYRDLK N+L+ + + +++DFG AK V R +
Sbjct: 137 VLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWTLC 185
Query: 240 GTHGYCAPEYATTGKLTAKSDIFSFGVVLLELITGRP 276
GT Y APE + D ++ GV++ E+ G P
Sbjct: 186 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 222
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 97/217 (44%), Gaps = 21/217 (9%)
Query: 66 QLVAATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEF---LVEVLM 122
Q A D F+ LG G FG V K ETG A+K LD K+ L E +
Sbjct: 35 QNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 123 LSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGA 182
L + P LV L + + +V EY+P G + HL + +P + R AA
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARF-YAAQI 150
Query: 183 ARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTR---VM 239
EYLH+ +IYRDLK N+L+ + + +++DFG AK V R +
Sbjct: 151 VLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLC 199
Query: 240 GTHGYCAPEYATTGKLTAKSDIFSFGVVLLELITGRP 276
GT Y APE + D ++ GV++ E+ G P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 105/209 (50%), Gaps = 15/209 (7%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLD-DTGFQGEKEFLV-EVLMLSLMRHP 129
+NF+ +G+G +G VYK + TG+VVA+K++ DT +G + E+ +L + HP
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 130 NLVHLIGYCAEGTQRLLVYEYM--PLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLE 187
N+V L+ + LV+E++ L D LT PL + ++ +GL
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDA-SALTGIPLPLIKSYLFQL----LQGLA 116
Query: 188 YLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAP 247
+ H+ V++RDLK N+L+ KL+DFGLA+ G T + T Y AP
Sbjct: 117 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTLWYRAP 171
Query: 248 EYATTGKLTAKS-DIFSFGVVLLELITGR 275
E K + + DI+S G + E++T R
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 97/217 (44%), Gaps = 21/217 (9%)
Query: 66 QLVAATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEF---LVEVLM 122
Q A D F+ LG G FG V K ETG A+K LD K+ L E +
Sbjct: 36 QNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 95
Query: 123 LSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGA 182
L + P LV L + + +V EY+P G + HL + +P + R AA
Sbjct: 96 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARF-YAAQI 151
Query: 183 ARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTR---VM 239
EYLH+ +IYRDLK N+L+ + + +++DFG AK V R +
Sbjct: 152 VLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLC 200
Query: 240 GTHGYCAPEYATTGKLTAKSDIFSFGVVLLELITGRP 276
GT Y APE + D ++ GV++ E+ G P
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 237
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 105/209 (50%), Gaps = 15/209 (7%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLD-DTGFQGEKEFLV-EVLMLSLMRHP 129
+NF+ +G+G +G VYK + TG+VVA+K++ DT +G + E+ +L + HP
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 130 NLVHLIGYCAEGTQRLLVYEYM--PLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLE 187
N+V L+ + LV+E++ L D LT PL + ++ +GL
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDA-SALTGIPLPLIKSYLFQL----LQGLA 124
Query: 188 YLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAP 247
+ H+ V++RDLK N+L+ KL+DFGLA+ G T + T Y AP
Sbjct: 125 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTLWYRAP 179
Query: 248 EYATTGKLTAKS-DIFSFGVVLLELITGR 275
E K + + DI+S G + E++T R
Sbjct: 180 EILLGXKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 105/209 (50%), Gaps = 15/209 (7%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLD-DTGFQGEKEFLV-EVLMLSLMRHP 129
+NF+ +G+G +G VYK + TG+VVA+K++ DT +G + E+ +L + HP
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 130 NLVHLIGYCAEGTQRLLVYEYM--PLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLE 187
N+V L+ + LV+E++ L D LT PL + ++ +GL
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDA-SALTGIPLPLIKSYLFQL----LQGLA 124
Query: 188 YLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAP 247
+ H+ V++RDLK N+L+ KL+DFGLA+ G T + T Y AP
Sbjct: 125 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTLWYRAP 179
Query: 248 EYATTGKLTAKS-DIFSFGVVLLELITGR 275
E K + + DI+S G + E++T R
Sbjct: 180 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 97/217 (44%), Gaps = 21/217 (9%)
Query: 66 QLVAATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEF---LVEVLM 122
Q A D F+ LG G FG V K ETG A+K LD K+ L E +
Sbjct: 36 QNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 95
Query: 123 LSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGA 182
L + P LV L + + +V EY+P G + HL + +P + R AA
Sbjct: 96 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARF-YAAQI 151
Query: 183 ARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTR---VM 239
EYLH+ +IYRDLK N+L+ + + +++DFG AK V R +
Sbjct: 152 VLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLC 200
Query: 240 GTHGYCAPEYATTGKLTAKSDIFSFGVVLLELITGRP 276
GT Y APE + D ++ GV++ E+ G P
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 237
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 96/217 (44%), Gaps = 21/217 (9%)
Query: 66 QLVAATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEF---LVEVLM 122
Q A D F+ LG G FG V K ETG A+K LD K+ L E +
Sbjct: 35 QNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 123 LSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGA 182
L + P LV L + + +V EY P G + HL + +P + R AA
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEP---HARF-YAAQI 150
Query: 183 ARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTR---VM 239
EYLH+ +IYRDLK N+++ + + K++DFG AK V R +
Sbjct: 151 VLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAK--------RVKGRTWXLC 199
Query: 240 GTHGYCAPEYATTGKLTAKSDIFSFGVVLLELITGRP 276
GT Y APE + D ++ GV++ E+ G P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 97/217 (44%), Gaps = 21/217 (9%)
Query: 66 QLVAATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEF---LVEVLM 122
Q A D F+ LG G FG V K ETG A+K LD K+ L E +
Sbjct: 35 QNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 123 LSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGA 182
L + P LV L + + +V EY+P G + HL + +P + R AA
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARF-YAAQI 150
Query: 183 ARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTR---VM 239
EYLH+ +IYRDLK N+L+ + + +++DFG AK V R +
Sbjct: 151 VLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLC 199
Query: 240 GTHGYCAPEYATTGKLTAKSDIFSFGVVLLELITGRP 276
GT Y APE + D ++ GV++ E+ G P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 97/217 (44%), Gaps = 21/217 (9%)
Query: 66 QLVAATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEF---LVEVLM 122
Q A D F+ LG G FG V K ETG A+K LD K+ L E +
Sbjct: 36 QNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 95
Query: 123 LSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGA 182
L + P LV L + + +V EY+P G + HL + +P + R AA
Sbjct: 96 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARF-YAAQI 151
Query: 183 ARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTR---VM 239
EYLH+ +IYRDLK N+L+ + + +++DFG AK V R +
Sbjct: 152 VLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWTLC 200
Query: 240 GTHGYCAPEYATTGKLTAKSDIFSFGVVLLELITGRP 276
GT Y APE + D ++ GV++ E+ G P
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 237
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 105/209 (50%), Gaps = 15/209 (7%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLD-DTGFQGEKEFLV-EVLMLSLMRHP 129
+NF+ +G+G +G VYK + TG+VVA+K++ DT +G + E+ +L + HP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 130 NLVHLIGYCAEGTQRLLVYEYM--PLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLE 187
N+V L+ + LV+E++ L D LT PL + ++ +GL
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDA-SALTGIPLPLIKSYLFQL----LQGLA 117
Query: 188 YLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAP 247
+ H+ V++RDLK N+L+ KL+DFGLA+ G T + T Y AP
Sbjct: 118 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTLWYRAP 172
Query: 248 EYATTGKLTAKS-DIFSFGVVLLELITGR 275
E K + + DI+S G + E++T R
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 96/217 (44%), Gaps = 21/217 (9%)
Query: 66 QLVAATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEF---LVEVLM 122
Q A D F+ LG G FG V K ETG A+K LD K+ L E +
Sbjct: 36 QNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 95
Query: 123 LSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGA 182
L + P LV L + + +V EY P G + HL + +P + R AA
Sbjct: 96 LQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP---HARF-YAAQI 151
Query: 183 ARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTR---VM 239
EYLH+ +IYRDLK N+++ + + K++DFG AK V R +
Sbjct: 152 VLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAK--------RVKGRTWXLC 200
Query: 240 GTHGYCAPEYATTGKLTAKSDIFSFGVVLLELITGRP 276
GT Y APE + D ++ GV++ E+ G P
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 237
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 99/217 (45%), Gaps = 14/217 (6%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGE---KEFLVEVLMLSLMRH 128
D+F+ LG+G FG VY + ++ +VA+K L + + E + E+ + + + H
Sbjct: 23 DDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHH 82
Query: 129 PNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEY 188
PN++ L Y + + L+ EY P G L L + D I A L Y
Sbjct: 83 PNILRLYNYFYDRRRIYLILEYAPRGELYKEL----QKSCTFDEQRTATIMEELADALMY 138
Query: 189 LHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPE 248
H K VI+RD+K N+LLG K++DFG + P+ + + GT Y PE
Sbjct: 139 CHGKK---VIHRDIKPENLLLGLKGELKIADFGWSVHAPSLRRK----TMCGTLDYLPPE 191
Query: 249 YATTGKLTAKSDIFSFGVVLLELITGRPAMDDSQGHE 285
K D++ GV+ EL+ G P + + +E
Sbjct: 192 MIEGRMHNEKVDLWCIGVLCYELLVGNPPFESASHNE 228
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 99/222 (44%), Gaps = 16/222 (7%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEF---LVEVLMLSLMRH 128
+ F+ LG+G FG V K TG+ A+K L + E L E +L RH
Sbjct: 10 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 69
Query: 129 PNLVHLIGYCAEGTQRL-LVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLE 187
P L L Y + RL V EY G L HL + + A L+
Sbjct: 70 PFLTAL-KYSFQTHDRLCFVMEYANGGELFFHL----SRERVFSEDRARFYGAEIVSALD 124
Query: 188 YLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVM-GTHGYCA 246
YLH++ + V+YRDLK N++L K H K++DFGL K G K + + GT Y A
Sbjct: 125 YLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCK---EGIKDGATMKXFCGTPEYLA 179
Query: 247 PEYATTGKLTAKSDIFSFGVVLLELITGRPAMDDSQGHERML 288
PE D + GVV+ E++ GR + Q HE++
Sbjct: 180 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN-QDHEKLF 220
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 96/210 (45%), Gaps = 13/210 (6%)
Query: 73 NFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGE--KEFLVEVLMLSLMRHPN 130
N++ +G+G F V + TG+ VAVK +D T ++ EV + ++ HPN
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPN 74
Query: 131 LVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLH 190
+V L LV EY G + D+L+ K + + + A ++Y H
Sbjct: 75 IVKLFEVIETEKTLYLVXEYASGGEVFDYLVA-HGRXKEKEARAKFRQIVSA---VQYCH 130
Query: 191 NKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYA 250
K +++RDLKA N+LL + K++DFG + G+K G Y APE
Sbjct: 131 QKF---IVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDA---FCGAPPYAAPELF 184
Query: 251 TTGKLTA-KSDIFSFGVVLLELITGRPAMD 279
K + D++S GV+L L++G D
Sbjct: 185 QGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 76/233 (32%), Positives = 111/233 (47%), Gaps = 22/233 (9%)
Query: 51 SAHENKNKENTFTYRQLVAATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGF 110
S + N+ + + RQ V + F+ LG+GGFG V ++ TG++ A K+L+
Sbjct: 164 SIYFNRFLQWKWLERQPVT-KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRI 222
Query: 111 Q---GEKEFLVEVLMLSLMRHPNLVHLIGYCAEGTQRL-LVYEYMPLGSLEDHLLGLT-- 164
+ GE L E +L + +V L Y E L LV M G L+ H+ +
Sbjct: 223 KKRKGEAMALNEKQILEKVNSRFVVSL-AYAYETKDALCLVLTLMNGGDLKFHIYHMGQA 281
Query: 165 --PEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGL 222
PE + + + AA GLE LH + ++YRDLK NILL H ++SD GL
Sbjct: 282 GFPEARAVFY------AAEICCGLEDLHRER---IVYRDLKPENILLDDHGHIRISDLGL 332
Query: 223 AKFGPTGDKSHVSTRVMGTHGYCAPEYATTGKLTAKSDIFSFGVVLLELITGR 275
A P G + RV GT GY APE + T D ++ G +L E+I G+
Sbjct: 333 AVHVPEGQT--IKGRV-GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQ 382
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 102/211 (48%), Gaps = 25/211 (11%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNL 131
DNF +G+G G V + +G++VAVK++D Q + EV+++ +H N+
Sbjct: 32 DNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV 88
Query: 132 VHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRM---KIAA---GAARG 185
V + G + +V E++ G+L D + +TRM +IAA +
Sbjct: 89 VEMYNSYLVGDELWVVMEFLEGGALTD-----------IVTHTRMNEEQIAAVCLAVLQA 137
Query: 186 LEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYC 245
L LH + VI+RD+K+ +ILL KLSDFG + ++GT +
Sbjct: 138 LSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFC--AQVSKEVPRRKXLVGTPYWM 192
Query: 246 APEYATTGKLTAKSDIFSFGVVLLELITGRP 276
APE + + DI+S G++++E++ G P
Sbjct: 193 APELISRLPYGPEVDIWSLGIMVIEMVDGEP 223
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 106/209 (50%), Gaps = 15/209 (7%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLD-DTGFQGEKEFLV-EVLMLSLMRHP 129
+NF+ +G+G +G VYK + TG+VVA+K++ DT +G + E+ +L + HP
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 130 NLVHLIGYCAEGTQRLLVYEYM--PLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLE 187
N+V L+ + LV+E++ L + D LT PL + ++ +GL
Sbjct: 62 NIVKLLDVIHTENKLYLVFEHVHQDLKTFMD-ASALTGIPLPLIKSYLFQL----LQGLA 116
Query: 188 YLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAP 247
+ H+ V++RDLK N+L+ KL+DFGLA+ G T + T Y AP
Sbjct: 117 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTLWYRAP 171
Query: 248 EYATTGKLTAKS-DIFSFGVVLLELITGR 275
E K + + DI+S G + E++T R
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 96/217 (44%), Gaps = 21/217 (9%)
Query: 66 QLVAATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEF---LVEVLM 122
Q A D F+ LG G FG V K ETG A+K LD K+ L E +
Sbjct: 35 QNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 123 LSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGA 182
L + P LV L + + +V EY P G + HL + +P + R AA
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP---HARF-YAAQI 150
Query: 183 ARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTR---VM 239
EYLH+ +IYRDLK N+++ + + K++DFG AK V R +
Sbjct: 151 VLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAK--------RVKGRTWXLC 199
Query: 240 GTHGYCAPEYATTGKLTAKSDIFSFGVVLLELITGRP 276
GT Y APE + D ++ GV++ E+ G P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 97/217 (44%), Gaps = 21/217 (9%)
Query: 66 QLVAATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEF---LVEVLM 122
Q A D F+ LG G FG V K ETG A+K LD K+ L E +
Sbjct: 56 QNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 115
Query: 123 LSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGA 182
L + P LV L + + +V EY+P G + HL + +P + R AA
Sbjct: 116 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARF-YAAQI 171
Query: 183 ARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTR---VM 239
EYLH+ +IYRDLK N+L+ + + +++DFG AK V R +
Sbjct: 172 VLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLC 220
Query: 240 GTHGYCAPEYATTGKLTAKSDIFSFGVVLLELITGRP 276
GT Y APE + D ++ GV++ E+ G P
Sbjct: 221 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 257
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 99/222 (44%), Gaps = 16/222 (7%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEF---LVEVLMLSLMRH 128
+ F+ LG+G FG V K TG+ A+K L + E L E +L RH
Sbjct: 8 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 67
Query: 129 PNLVHLIGYCAEGTQRL-LVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLE 187
P L L Y + RL V EY G L HL + + A L+
Sbjct: 68 PFLTAL-KYSFQTHDRLCFVMEYANGGELFFHL----SRERVFSEDRARFYGAEIVSALD 122
Query: 188 YLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVM-GTHGYCA 246
YLH++ + V+YRDLK N++L K H K++DFGL K G K + + GT Y A
Sbjct: 123 YLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCK---EGIKDGATMKXFCGTPEYLA 177
Query: 247 PEYATTGKLTAKSDIFSFGVVLLELITGRPAMDDSQGHERML 288
PE D + GVV+ E++ GR + Q HE++
Sbjct: 178 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN-QDHEKLF 218
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 102/211 (48%), Gaps = 25/211 (11%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNL 131
DNF +G+G G V + +G++VAVK++D Q + EV+++ +H N+
Sbjct: 23 DNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV 79
Query: 132 VHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRM---KIAA---GAARG 185
V + G + +V E++ G+L D + +TRM +IAA +
Sbjct: 80 VEMYNSYLVGDELWVVMEFLEGGALTD-----------IVTHTRMNEEQIAAVCLAVLQA 128
Query: 186 LEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYC 245
L LH + VI+RD+K+ +ILL KLSDFG + ++GT +
Sbjct: 129 LSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFC--AQVSKEVPRRKXLVGTPYWM 183
Query: 246 APEYATTGKLTAKSDIFSFGVVLLELITGRP 276
APE + + DI+S G++++E++ G P
Sbjct: 184 APELISRLPYGPEVDIWSLGIMVIEMVDGEP 214
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 99/216 (45%), Gaps = 20/216 (9%)
Query: 69 AATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRH 128
A ++ ++ +G G G V+K + +TG V+AVKQ+ +G + E + ++ L + L H
Sbjct: 22 AEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSH 81
Query: 129 --PNLVHLIGYCAEGTQRLLVYEYMPLGS--LEDHLLGLTPEMKPLDWNTRMKIAAGAAR 184
P +V G T + E M + L+ + G PE K+ +
Sbjct: 82 DCPYIVQCFGTFITNTDVFIAMELMGTCAEKLKKRMQGPIPE------RILGKMTVAIVK 135
Query: 185 GLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGY 244
L YL K VI+RD+K NILL + KL DFG++ G D R G Y
Sbjct: 136 ALYYLKEKHG--VIHRDVKPSNILLDERGQIKLCDFGIS--GRLVD-DKAKDRSAGCAAY 190
Query: 245 CAPEYA-----TTGKLTAKSDIFSFGVVLLELITGR 275
APE T ++D++S G+ L+EL TG+
Sbjct: 191 MAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQ 226
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 108/213 (50%), Gaps = 19/213 (8%)
Query: 70 ATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLD-DTGFQGEKEFLV-EVLMLSLMR 127
+ +NF+ +G+G +G VYK + TG+VVA+K++ DT +G + E+ +L +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 128 HPNLVHLIGYCAEGTQRLLVYEYM--PLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARG 185
HPN+V L+ + LV+E++ L + D LT PL + ++ +G
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQDLKTFMDA-SALTGIPLPLIKSYLFQL----LQG 118
Query: 186 LEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAK-FG-PTGDKSHVSTRVMGTHG 243
L + H+ V++RDLK N+L+ KL+DFGLA+ FG P H T
Sbjct: 119 LAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLW 171
Query: 244 YCAPEYATTGKLTAKS-DIFSFGVVLLELITGR 275
Y APE K + + DI+S G + E++T R
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 76/233 (32%), Positives = 111/233 (47%), Gaps = 22/233 (9%)
Query: 51 SAHENKNKENTFTYRQLVAATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGF 110
S + N+ + + RQ V + F+ LG+GGFG V ++ TG++ A K+L+
Sbjct: 164 SIYFNRFLQWKWLERQPVT-KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRI 222
Query: 111 Q---GEKEFLVEVLMLSLMRHPNLVHLIGYCAEGTQRL-LVYEYMPLGSLEDHLLGLT-- 164
+ GE L E +L + +V L Y E L LV M G L+ H+ +
Sbjct: 223 KKRKGEAMALNEKQILEKVNSRFVVSL-AYAYETKDALCLVLTLMNGGDLKFHIYHMGQA 281
Query: 165 --PEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGL 222
PE + + + AA GLE LH + ++YRDLK NILL H ++SD GL
Sbjct: 282 GFPEARAVFY------AAEICCGLEDLHRER---IVYRDLKPENILLDDHGHIRISDLGL 332
Query: 223 AKFGPTGDKSHVSTRVMGTHGYCAPEYATTGKLTAKSDIFSFGVVLLELITGR 275
A P G + RV GT GY APE + T D ++ G +L E+I G+
Sbjct: 333 AVHVPEGQT--IKGRV-GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQ 382
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 99/222 (44%), Gaps = 16/222 (7%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEF---LVEVLMLSLMRH 128
+ F+ LG+G FG V K TG+ A+K L + E L E +L RH
Sbjct: 9 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 68
Query: 129 PNLVHLIGYCAEGTQRL-LVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLE 187
P L L Y + RL V EY G L HL + + A L+
Sbjct: 69 PFLTAL-KYSFQTHDRLCFVMEYANGGELFFHL----SRERVFSEDRARFYGAEIVSALD 123
Query: 188 YLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVM-GTHGYCA 246
YLH++ + V+YRDLK N++L K H K++DFGL K G K + + GT Y A
Sbjct: 124 YLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCK---EGIKDGATMKXFCGTPEYLA 178
Query: 247 PEYATTGKLTAKSDIFSFGVVLLELITGRPAMDDSQGHERML 288
PE D + GVV+ E++ GR + Q HE++
Sbjct: 179 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN-QDHEKLF 219
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 102/211 (48%), Gaps = 25/211 (11%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNL 131
DNF +G+G G V + +G++VAVK++D Q + EV+++ +H N+
Sbjct: 27 DNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV 83
Query: 132 VHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRM---KIAA---GAARG 185
V + G + +V E++ G+L D + +TRM +IAA +
Sbjct: 84 VEMYNSYLVGDELWVVMEFLEGGALTD-----------IVTHTRMNEEQIAAVCLAVLQA 132
Query: 186 LEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYC 245
L LH + VI+RD+K+ +ILL KLSDFG + ++GT +
Sbjct: 133 LSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFC--AQVSKEVPRRKXLVGTPYWM 187
Query: 246 APEYATTGKLTAKSDIFSFGVVLLELITGRP 276
APE + + DI+S G++++E++ G P
Sbjct: 188 APELISRLPYGPEVDIWSLGIMVIEMVDGEP 218
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 102/211 (48%), Gaps = 25/211 (11%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNL 131
DNF +G+G G V + +G++VAVK++D Q + EV+++ +H N+
Sbjct: 34 DNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV 90
Query: 132 VHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRM---KIAA---GAARG 185
V + G + +V E++ G+L D + +TRM +IAA +
Sbjct: 91 VEMYNSYLVGDELWVVMEFLEGGALTD-----------IVTHTRMNEEQIAAVCLAVLQA 139
Query: 186 LEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYC 245
L LH + VI+RD+K+ +ILL KLSDFG + ++GT +
Sbjct: 140 LSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFC--AQVSKEVPRRKXLVGTPYWM 194
Query: 246 APEYATTGKLTAKSDIFSFGVVLLELITGRP 276
APE + + DI+S G++++E++ G P
Sbjct: 195 APELISRLPYGPEVDIWSLGIMVIEMVDGEP 225
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 88/208 (42%), Gaps = 10/208 (4%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEF---LVEVLMLSLMRH 128
++FK LG+G F + T + A+K L+ E + E ++S + H
Sbjct: 30 EDFKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 129 PNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEY 188
P V L + + Y G L L ++ D A LEY
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGEL----LKYIRKIGSFDETCTRFYTAEIVSALEY 145
Query: 189 LHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPE 248
LH K +I+RDLK NILL + H +++DFG AK K + +GT Y +PE
Sbjct: 146 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 202
Query: 249 YATTGKLTAKSDIFSFGVVLLELITGRP 276
T SD+++ G ++ +L+ G P
Sbjct: 203 LLTEKSACKSSDLWALGCIIYQLVAGLP 230
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 107/213 (50%), Gaps = 19/213 (8%)
Query: 70 ATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLD-DTGFQGEKEFLV-EVLMLSLMR 127
+ +NF+ +G+G +G VYK + TG+VVA+K++ DT +G + E+ +L +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 128 HPNLVHLIGYCAEGTQRLLVYEYM--PLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARG 185
HPN+V L+ + LV+E++ L D LT PL + ++ +G
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDA-SALTGIPLPLIKSYLFQL----LQG 115
Query: 186 LEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAK-FG-PTGDKSHVSTRVMGTHG 243
L + H+ V++RDLK N+L+ KL+DFGLA+ FG P H T
Sbjct: 116 LAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLW 168
Query: 244 YCAPEYATTGKLTAKS-DIFSFGVVLLELITGR 275
Y APE K + + DI+S G + E++T R
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 99/218 (45%), Gaps = 23/218 (10%)
Query: 71 TDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLD-----DTGFQGEKEFLVEVLMLSL 125
+D ++ LG GG V+ + + VAVK L D F F E +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFY--LRFRREAQNAAA 68
Query: 126 MRHPNLVHLI----GYCAEGTQRLLVYEYMPLGSLED--HLLGLTPEMKPLDWNTRMKIA 179
+ HP +V + G +V EY+ +L D H G P+ +++
Sbjct: 69 LNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG------PMTPKRAIEVI 122
Query: 180 AGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAK-FGPTGDKSHVSTRV 238
A A + L + H +I+RD+K NI++ K+ DFG+A+ +G+ + V
Sbjct: 123 ADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAV 179
Query: 239 MGTHGYCAPEYATTGKLTAKSDIFSFGVVLLELITGRP 276
+GT Y +PE A + A+SD++S G VL E++TG P
Sbjct: 180 IGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEP 217
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 107/213 (50%), Gaps = 19/213 (8%)
Query: 70 ATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLD-DTGFQGEKEFLV-EVLMLSLMR 127
+ +NF+ +G+G +G VYK + TG+VVA+K++ DT +G + E+ +L +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 128 HPNLVHLIGYCAEGTQRLLVYEYM--PLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARG 185
HPN+V L+ + LV+E++ L D LT PL + ++ +G
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDA-SALTGIPLPLIKSYLFQL----LQG 115
Query: 186 LEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAK-FG-PTGDKSHVSTRVMGTHG 243
L + H+ V++RDLK N+L+ KL+DFGLA+ FG P H T
Sbjct: 116 LAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLW 168
Query: 244 YCAPEYATTGKLTAKS-DIFSFGVVLLELITGR 275
Y APE K + + DI+S G + E++T R
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 107/213 (50%), Gaps = 19/213 (8%)
Query: 70 ATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLD-DTGFQGEKEFLV-EVLMLSLMR 127
+ +NF+ +G+G +G VYK + TG+VVA+K++ DT +G + E+ +L +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 128 HPNLVHLIGYCAEGTQRLLVYEYM--PLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARG 185
HPN+V L+ + LV+E++ L D LT PL + ++ +G
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDA-SALTGIPLPLIKSYLFQL----LQG 115
Query: 186 LEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAK-FG-PTGDKSHVSTRVMGTHG 243
L + H+ V++RDLK N+L+ KL+DFGLA+ FG P H T
Sbjct: 116 LAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLW 168
Query: 244 YCAPEYATTGKLTAKS-DIFSFGVVLLELITGR 275
Y APE K + + DI+S G + E++T R
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 99/218 (45%), Gaps = 23/218 (10%)
Query: 71 TDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLD-----DTGFQGEKEFLVEVLMLSL 125
+D ++ LG GG V+ + + VAVK L D F F E +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFY--LRFRREAQNAAA 68
Query: 126 MRHPNLVHLI----GYCAEGTQRLLVYEYMPLGSLED--HLLGLTPEMKPLDWNTRMKIA 179
+ HP +V + G +V EY+ +L D H G P+ +++
Sbjct: 69 LNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG------PMTPKRAIEVI 122
Query: 180 AGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAK-FGPTGDKSHVSTRV 238
A A + L + H +I+RD+K NI++ K+ DFG+A+ +G+ + V
Sbjct: 123 ADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAV 179
Query: 239 MGTHGYCAPEYATTGKLTAKSDIFSFGVVLLELITGRP 276
+GT Y +PE A + A+SD++S G VL E++TG P
Sbjct: 180 IGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEP 217
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 107/213 (50%), Gaps = 19/213 (8%)
Query: 70 ATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLD-DTGFQGEKEFLV-EVLMLSLMR 127
+ +NF+ +G+G +G VYK + TG+VVA+K++ DT +G + E+ +L +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 128 HPNLVHLIGYCAEGTQRLLVYEYM--PLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARG 185
HPN+V L+ + LV+E++ L D LT PL + ++ +G
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDA-SALTGIPLPLIKSYLFQL----LQG 115
Query: 186 LEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAK-FG-PTGDKSHVSTRVMGTHG 243
L + H+ V++RDLK N+L+ KL+DFGLA+ FG P H T
Sbjct: 116 LAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLW 168
Query: 244 YCAPEYATTGKLTAKS-DIFSFGVVLLELITGR 275
Y APE K + + DI+S G + E++T R
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 102/211 (48%), Gaps = 25/211 (11%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNL 131
DNF +G+G G V + +G++VAVK++D Q + EV+++ +H N+
Sbjct: 77 DNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV 133
Query: 132 VHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRM---KIAA---GAARG 185
V + G + +V E++ G+L D + +TRM +IAA +
Sbjct: 134 VEMYNSYLVGDELWVVMEFLEGGALTD-----------IVTHTRMNEEQIAAVCLAVLQA 182
Query: 186 LEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYC 245
L LH + VI+RD+K+ +ILL KLSDFG + ++GT +
Sbjct: 183 LSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFC--AQVSKEVPRRKXLVGTPYWM 237
Query: 246 APEYATTGKLTAKSDIFSFGVVLLELITGRP 276
APE + + DI+S G++++E++ G P
Sbjct: 238 APELISRLPYGPEVDIWSLGIMVIEMVDGEP 268
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 105/223 (47%), Gaps = 36/223 (16%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQ----GEKEFLVEVLMLSLMRHPNLVHLI 135
LG+G +G V+K TG+VVAVK++ D FQ ++ F +++ L H N+V+L+
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFD-AFQNSTDAQRTFREIMILTELSGHENIVNLL 75
Query: 136 GYCAEGTQR--LLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKA 193
R LV++YM + H + ++P+ + + + ++YLH+
Sbjct: 76 NVLRADNDRDVYLVFDYM---ETDLHAVIRANILEPVH---KQYVVYQLIKVIKYLHSGG 129
Query: 194 DPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPT-------------------GDKSHV 234
+++RD+K NILL H K++DFGL++ D +
Sbjct: 130 ---LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPI 186
Query: 235 STRVMGTHGYCAPEYAT-TGKLTAKSDIFSFGVVLLELITGRP 276
T + T Y APE + K T D++S G +L E++ G+P
Sbjct: 187 LTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKP 229
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 108/215 (50%), Gaps = 19/215 (8%)
Query: 68 VAATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLD-DTGFQGEKEFLV-EVLMLSL 125
+ + +NF+ +G+G +G VYK + TG+VVA+K++ DT +G + E+ +L
Sbjct: 3 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 62
Query: 126 MRHPNLVHLIGYCAEGTQRLLVYEYM--PLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAA 183
+ HPN+V L+ + LV+E++ L D LT PL + ++
Sbjct: 63 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDA-SALTGIPLPLIKSYLFQL----L 117
Query: 184 RGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAK-FG-PTGDKSHVSTRVMGT 241
+GL + H+ V++RDLK N+L+ KL+DFGLA+ FG P H T
Sbjct: 118 QGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----T 170
Query: 242 HGYCAPEYATTGKLTAKS-DIFSFGVVLLELITGR 275
Y APE K + + DI+S G + E++T R
Sbjct: 171 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 107/213 (50%), Gaps = 19/213 (8%)
Query: 70 ATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLD-DTGFQGEKEFLV-EVLMLSLMR 127
+ +NF+ +G+G +G VYK + TG+VVA+K++ DT +G + E+ +L +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 128 HPNLVHLIGYCAEGTQRLLVYEYM--PLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARG 185
HPN+V L+ + LV+E++ L D LT PL + ++ +G
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDA-SALTGIPLPLIKSYLFQL----LQG 117
Query: 186 LEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAK-FG-PTGDKSHVSTRVMGTHG 243
L + H+ V++RDLK N+L+ KL+DFGLA+ FG P H T
Sbjct: 118 LAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLW 170
Query: 244 YCAPEYATTGKLTAKS-DIFSFGVVLLELITGR 275
Y APE K + + DI+S G + E++T R
Sbjct: 171 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 108/215 (50%), Gaps = 19/215 (8%)
Query: 68 VAATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLD-DTGFQGEKEFLV-EVLMLSL 125
+ + +NF+ +G+G +G VYK + TG+VVA+K++ DT +G + E+ +L
Sbjct: 2 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 61
Query: 126 MRHPNLVHLIGYCAEGTQRLLVYEYM--PLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAA 183
+ HPN+V L+ + LV+E++ L D LT PL + ++
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDA-SALTGIPLPLIKSYLFQL----L 116
Query: 184 RGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAK-FG-PTGDKSHVSTRVMGT 241
+GL + H+ V++RDLK N+L+ KL+DFGLA+ FG P H T
Sbjct: 117 QGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----T 169
Query: 242 HGYCAPEYATTGKLTAKS-DIFSFGVVLLELITGR 275
Y APE K + + DI+S G + E++T R
Sbjct: 170 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 99/218 (45%), Gaps = 23/218 (10%)
Query: 71 TDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLD-----DTGFQGEKEFLVEVLMLSL 125
+D ++ LG GG V+ + + VAVK L D F F E +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFY--LRFRREAQNAAA 68
Query: 126 MRHPNLVHLI----GYCAEGTQRLLVYEYMPLGSLED--HLLGLTPEMKPLDWNTRMKIA 179
+ HP +V + G +V EY+ +L D H G P+ +++
Sbjct: 69 LNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG------PMTPKRAIEVI 122
Query: 180 AGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAK-FGPTGDKSHVSTRV 238
A A + L + H +I+RD+K NI++ K+ DFG+A+ +G+ + V
Sbjct: 123 ADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAV 179
Query: 239 MGTHGYCAPEYATTGKLTAKSDIFSFGVVLLELITGRP 276
+GT Y +PE A + A+SD++S G VL E++TG P
Sbjct: 180 IGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEP 217
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 106/211 (50%), Gaps = 19/211 (9%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLD-DTGFQGEKEFLV-EVLMLSLMRHP 129
+NF+ +G+G +G VYK + TG+VVA+K++ DT +G + E+ +L + HP
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 130 NLVHLIGYCAEGTQRLLVYEYM--PLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLE 187
N+V L+ + LV+E++ L D LT PL + ++ +GL
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDA-SALTGIPLPLIKSYLFQL----LQGLA 116
Query: 188 YLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAK-FG-PTGDKSHVSTRVMGTHGYC 245
+ H+ V++RDLK N+L+ KL+DFGLA+ FG P H T Y
Sbjct: 117 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYR 169
Query: 246 APEYATTGKLTAKS-DIFSFGVVLLELITGR 275
APE K + + DI+S G + E++T R
Sbjct: 170 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 107/213 (50%), Gaps = 19/213 (8%)
Query: 70 ATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLD-DTGFQGEKEFLV-EVLMLSLMR 127
+ +NF+ +G+G +G VYK + TG+VVA+K++ DT +G + E+ +L +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 128 HPNLVHLIGYCAEGTQRLLVYEYM--PLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARG 185
HPN+V L+ + LV+E++ L D LT PL + ++ +G
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDA-SALTGIPLPLIKSYLFQL----LQG 117
Query: 186 LEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAK-FG-PTGDKSHVSTRVMGTHG 243
L + H+ V++RDLK N+L+ KL+DFGLA+ FG P H T
Sbjct: 118 LAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLW 170
Query: 244 YCAPEYATTGKLTAKS-DIFSFGVVLLELITGR 275
Y APE K + + DI+S G + E++T R
Sbjct: 171 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 100/217 (46%), Gaps = 30/217 (13%)
Query: 73 NFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLV 132
+FK+ +G GGFG V+K K G+ +K++ + E+ EV L+ + H N+V
Sbjct: 12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAER----EVKALAKLDHVNIV 67
Query: 133 HLIGYCAEG----------------TQRLLV-YEYMPLGSLEDHLLGLTPEMKPLDWNTR 175
H G C +G T+ L + E+ G+LE + E LD
Sbjct: 68 HYNG-CWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGE--KLDKVLA 124
Query: 176 MKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVS 235
+++ +G++Y+H+K +I RDLK NI L K+ DFGL K
Sbjct: 125 LELFEQITKGVDYIHSK---KLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGK---R 178
Query: 236 TRVMGTHGYCAPEYATTGKLTAKSDIFSFGVVLLELI 272
R GT Y +PE ++ + D+++ G++L EL+
Sbjct: 179 XRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 107/213 (50%), Gaps = 19/213 (8%)
Query: 70 ATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLD-DTGFQGEKEFLV-EVLMLSLMR 127
+ +NF+ +G+G +G VYK + TG+VVA+K++ DT +G + E+ +L +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 128 HPNLVHLIGYCAEGTQRLLVYEYM--PLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARG 185
HPN+V L+ + LV+E++ L D LT PL + ++ +G
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDA-SALTGIPLPLIKSYLFQL----LQG 116
Query: 186 LEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAK-FG-PTGDKSHVSTRVMGTHG 243
L + H+ V++RDLK N+L+ KL+DFGLA+ FG P H T
Sbjct: 117 LAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLW 169
Query: 244 YCAPEYATTGKLTAKS-DIFSFGVVLLELITGR 275
Y APE K + + DI+S G + E++T R
Sbjct: 170 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 107/213 (50%), Gaps = 19/213 (8%)
Query: 70 ATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLD-DTGFQGEKEFLV-EVLMLSLMR 127
+ +NF+ +G+G +G VYK + TG+VVA+K++ DT +G + E+ +L +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 128 HPNLVHLIGYCAEGTQRLLVYEYM--PLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARG 185
HPN+V L+ + LV+E++ L D LT PL + ++ +G
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDA-SALTGIPLPLIKSYLFQL----LQG 116
Query: 186 LEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAK-FG-PTGDKSHVSTRVMGTHG 243
L + H+ V++RDLK N+L+ KL+DFGLA+ FG P H T
Sbjct: 117 LAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLW 169
Query: 244 YCAPEYATTGKLTAKS-DIFSFGVVLLELITGR 275
Y APE K + + DI+S G + E++T R
Sbjct: 170 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 99/226 (43%), Gaps = 9/226 (3%)
Query: 68 VAATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLD-DTGFQGEKEFLVEVLMLSLM 126
V +++ LG+G +G V T + VAVK +D + E+ + ++
Sbjct: 2 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 61
Query: 127 RHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGL 186
H N+V G+ EG + L EY G L D + +P ++ AG
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV--- 118
Query: 187 EYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCA 246
YLH + +RD+K N+LL + + K+SDFGLA ++ + ++ GT Y A
Sbjct: 119 -YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVA 174
Query: 247 PEYATTGKLTAKS-DIFSFGVVLLELITGRPAMDDSQGHERMLVDW 291
PE + A+ D++S G+VL ++ G D + DW
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSXQEYSDW 220
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 99/218 (45%), Gaps = 23/218 (10%)
Query: 71 TDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLD-----DTGFQGEKEFLVEVLMLSL 125
+D ++ LG GG V+ + + VAVK L D F F E +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFY--LRFRREAQNAAA 68
Query: 126 MRHPNLVHLIGY----CAEGTQRLLVYEYMPLGSLED--HLLGLTPEMKPLDWNTRMKIA 179
+ HP +V + G +V EY+ +L D H G P+ +++
Sbjct: 69 LNHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG------PMTPKRAIEVI 122
Query: 180 AGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAK-FGPTGDKSHVSTRV 238
A A + L + H +I+RD+K NI++ K+ DFG+A+ +G+ + V
Sbjct: 123 ADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAV 179
Query: 239 MGTHGYCAPEYATTGKLTAKSDIFSFGVVLLELITGRP 276
+GT Y +PE A + A+SD++S G VL E++TG P
Sbjct: 180 IGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEP 217
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 106/211 (50%), Gaps = 19/211 (9%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLD-DTGFQGEKEFLV-EVLMLSLMRHP 129
+NF+ +G+G +G VYK + TG+VVA+K++ DT +G + E+ +L + HP
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 130 NLVHLIGYCAEGTQRLLVYEYM--PLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLE 187
N+V L+ + LV+E++ L D LT PL + ++ +GL
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDA-SALTGIPLPLIKSYLFQL----LQGLA 116
Query: 188 YLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAK-FG-PTGDKSHVSTRVMGTHGYC 245
+ H+ V++RDLK N+L+ KL+DFGLA+ FG P H T Y
Sbjct: 117 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYR 169
Query: 246 APEYATTGKLTAKS-DIFSFGVVLLELITGR 275
APE K + + DI+S G + E++T R
Sbjct: 170 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 107/213 (50%), Gaps = 19/213 (8%)
Query: 70 ATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLD-DTGFQGEKEFLV-EVLMLSLMR 127
+ +NF+ +G+G +G VYK + TG+VVA+K++ DT +G + E+ +L +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 128 HPNLVHLIGYCAEGTQRLLVYEYM--PLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARG 185
HPN+V L+ + LV+E++ L D LT PL + ++ +G
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDA-SALTGIPLPLIKSYLFQL----LQG 117
Query: 186 LEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAK-FG-PTGDKSHVSTRVMGTHG 243
L + H+ V++RDLK N+L+ KL+DFGLA+ FG P H T
Sbjct: 118 LAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLW 170
Query: 244 YCAPEYATTGKLTAKS-DIFSFGVVLLELITGR 275
Y APE K + + DI+S G + E++T R
Sbjct: 171 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 100/216 (46%), Gaps = 28/216 (12%)
Query: 74 FKDTNFLGQGGFGAVYKGKL---AETGQVVAVKQL----------DDTGFQGEKEFLVEV 120
F+ LG+GG+G V++ + A TG++ A+K L D + E+ L EV
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 121 LMLSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAA 180
+HP +V LI G + L+ EY+ G L + L E ++ +T A
Sbjct: 79 ------KHPFIVDLIYAFQTGGKLYLILEYLSGGEL---FMQLEREGIFME-DTACFYLA 128
Query: 181 GAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMG 240
+ L +LH K +IYRDLK NI+L H KL+DFGL K + V+ G
Sbjct: 129 EISMALGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCK--ESIHDGTVTHXFCG 183
Query: 241 THGYCAPEYATTGKLTAKSDIFSFGVVLLELITGRP 276
T Y APE D +S G ++ +++TG P
Sbjct: 184 TIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAP 219
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 102/216 (47%), Gaps = 26/216 (12%)
Query: 80 LGQGGFGAVYKGKLA-------ETGQVVAVKQLDDTGFQGEKEFLV-EVLMLSLM-RHPN 130
LG+G FG V + + VAVK L D + + LV E+ M+ ++ +H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 131 LVHLIGYCAEGTQRLLVYEYMPLGSLEDHL-------------LGLTPEMKPLDWNTRMK 177
+++L+G C + ++ Y G+L ++L + PE + + + +
Sbjct: 103 IINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPE-EQMTFKDLVS 161
Query: 178 IAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTR 237
ARG+EYL A I+RDL A N+L+ + K++DFGLA+ D +T
Sbjct: 162 CTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 238 VMGTHGYCAPEYATTGKLTAKSDIFSFGVVLLELIT 273
+ APE T +SD++SFGV++ E+ T
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 106/211 (50%), Gaps = 19/211 (9%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLD-DTGFQGEKEFLV-EVLMLSLMRHP 129
+NF+ +G+G +G VYK + TG+VVA+K++ DT +G + E+ +L + HP
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 130 NLVHLIGYCAEGTQRLLVYEYM--PLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLE 187
N+V L+ + LV+E++ L D LT PL + ++ +GL
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMD-ASALTGIPLPLIKSYLFQL----LQGLA 118
Query: 188 YLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAK-FG-PTGDKSHVSTRVMGTHGYC 245
+ H+ V++RDLK N+L+ KL+DFGLA+ FG P H T Y
Sbjct: 119 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYR 171
Query: 246 APEYATTGKLTAKS-DIFSFGVVLLELITGR 275
APE K + + DI+S G + E++T R
Sbjct: 172 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 107/213 (50%), Gaps = 19/213 (8%)
Query: 70 ATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLD-DTGFQGEKEFLV-EVLMLSLMR 127
+ +NF+ +G+G +G VYK + TG+VVA+K++ DT +G + E+ +L +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 128 HPNLVHLIGYCAEGTQRLLVYEYM--PLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARG 185
HPN+V L+ + LV+E++ L D LT PL + ++ +G
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDA-SALTGIPLPLIKSYLFQL----LQG 118
Query: 186 LEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAK-FG-PTGDKSHVSTRVMGTHG 243
L + H+ V++RDLK N+L+ KL+DFGLA+ FG P H T
Sbjct: 119 LAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLW 171
Query: 244 YCAPEYATTGKLTAKS-DIFSFGVVLLELITGR 275
Y APE K + + DI+S G + E++T R
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 100/216 (46%), Gaps = 28/216 (12%)
Query: 74 FKDTNFLGQGGFGAVYKGKL---AETGQVVAVKQL----------DDTGFQGEKEFLVEV 120
F+ LG+GG+G V++ + A TG++ A+K L D + E+ L EV
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 121 LMLSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAA 180
+HP +V LI G + L+ EY+ G L + L E ++ +T A
Sbjct: 79 ------KHPFIVDLIYAFQTGGKLYLILEYLSGGEL---FMQLEREGIFME-DTACFYLA 128
Query: 181 GAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMG 240
+ L +LH K +IYRDLK NI+L H KL+DFGL K + V+ G
Sbjct: 129 EISMALGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCK--ESIHDGTVTHTFCG 183
Query: 241 THGYCAPEYATTGKLTAKSDIFSFGVVLLELITGRP 276
T Y APE D +S G ++ +++TG P
Sbjct: 184 TIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAP 219
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 106/224 (47%), Gaps = 21/224 (9%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKE-----FLVEVLMLSLMRHPNLVHL 134
+GQG FG V+K + +TGQ VA+K++ + EKE L E+ +L L++H N+V+L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKV---LMENEKEGFPITALREIKILQLLKHENVVNL 82
Query: 135 IGYC---AEGTQRLLVYEYMPLGSLEDHLLGLTPE-MKPLDWNTRMKIAAGAARGLEYLH 190
I C A R Y+ E L GL + + ++ GL Y+H
Sbjct: 83 IEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIH 142
Query: 191 NKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAK---FGPTGDKSHVSTRVMGTHGYCAP 247
+++RD+KA N+L+ + KL+DFGLA+ + RV+ T Y P
Sbjct: 143 RNK---ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV-TLWYRPP 198
Query: 248 EYATTGK-LTAKSDIFSFGVVLLELITGRPAMD-DSQGHERMLV 289
E + D++ G ++ E+ T P M +++ H+ L+
Sbjct: 199 ELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALI 242
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 98/216 (45%), Gaps = 19/216 (8%)
Query: 71 TDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLD-----DTGFQGEKEFLVEVLMLSL 125
+D ++ LG GG V+ + + VAVK L D F F E +
Sbjct: 28 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFY--LRFRREAQNAAA 85
Query: 126 MRHPNLVHLI----GYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAG 181
+ HP +V + G +V EY+ +L D + P+ +++ A
Sbjct: 86 LNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRD----IVHTEGPMTPKRAIEVIAD 141
Query: 182 AARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAK-FGPTGDKSHVSTRVMG 240
A + L + H +I+RD+K NI++ K+ DFG+A+ +G+ + V+G
Sbjct: 142 ACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIG 198
Query: 241 THGYCAPEYATTGKLTAKSDIFSFGVVLLELITGRP 276
T Y +PE A + A+SD++S G VL E++TG P
Sbjct: 199 TAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEP 234
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 99/226 (43%), Gaps = 9/226 (3%)
Query: 68 VAATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLD-DTGFQGEKEFLVEVLMLSLM 126
V +++ LG+G +G V T + VAVK +D + E+ + ++
Sbjct: 2 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 61
Query: 127 RHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGL 186
H N+V G+ EG + L EY G L D + +P ++ AG
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV--- 118
Query: 187 EYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCA 246
YLH + +RD+K N+LL + + K+SDFGLA ++ + ++ GT Y A
Sbjct: 119 -YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 174
Query: 247 PEYATTGKLTAKS-DIFSFGVVLLELITGRPAMDDSQGHERMLVDW 291
PE + A+ D++S G+VL ++ G D + DW
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 220
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 96/217 (44%), Gaps = 21/217 (9%)
Query: 66 QLVAATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEF---LVEVLM 122
Q A D F+ LG G FG V K ETG A+K LD K+ L E +
Sbjct: 35 QNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 123 LSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGA 182
L + P LV L + + +V EY P G + HL + +P + R AA
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP---HARF-YAAQI 150
Query: 183 ARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTR---VM 239
EYLH+ +IYRDLK N+++ + + +++DFG AK V R +
Sbjct: 151 VLTFEYLHS---LDLIYRDLKPENLMIDQQGYIQVTDFGFAK--------RVKGRTWXLC 199
Query: 240 GTHGYCAPEYATTGKLTAKSDIFSFGVVLLELITGRP 276
GT Y APE + D ++ GV++ E+ G P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 99/226 (43%), Gaps = 9/226 (3%)
Query: 68 VAATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLD-DTGFQGEKEFLVEVLMLSLM 126
V +++ LG+G +G V T + VAVK +D + E+ + ++
Sbjct: 2 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 61
Query: 127 RHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGL 186
H N+V G+ EG + L EY G L D + +P ++ AG
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV--- 118
Query: 187 EYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCA 246
YLH + +RD+K N+LL + + K+SDFGLA ++ + ++ GT Y A
Sbjct: 119 -YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 174
Query: 247 PEYATTGKLTAKS-DIFSFGVVLLELITGRPAMDDSQGHERMLVDW 291
PE + A+ D++S G+VL ++ G D + DW
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 220
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 100/226 (44%), Gaps = 9/226 (3%)
Query: 68 VAATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLD-DTGFQGEKEFLVEVLMLSLM 126
V +++ LG+G +G V T + VAVK +D + E+ + +++
Sbjct: 3 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAML 62
Query: 127 RHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGL 186
H N+V G+ EG + L EY G L D + +P ++ AG
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV--- 119
Query: 187 EYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCA 246
YLH + +RD+K N+LL + + K+SDFGLA ++ + ++ GT Y A
Sbjct: 120 -YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 175
Query: 247 PEYATTGKLTAKS-DIFSFGVVLLELITGRPAMDDSQGHERMLVDW 291
PE + A+ D++S G+VL ++ G D + DW
Sbjct: 176 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 221
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 99/226 (43%), Gaps = 9/226 (3%)
Query: 68 VAATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLD-DTGFQGEKEFLVEVLMLSLM 126
V +++ LG+G +G V T + VAVK +D + E+ + ++
Sbjct: 2 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 61
Query: 127 RHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGL 186
H N+V G+ EG + L EY G L D + +P ++ AG
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV--- 118
Query: 187 EYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCA 246
YLH + +RD+K N+LL + + K+SDFGLA ++ + ++ GT Y A
Sbjct: 119 -YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 174
Query: 247 PEYATTGKLTAKS-DIFSFGVVLLELITGRPAMDDSQGHERMLVDW 291
PE + A+ D++S G+VL ++ G D + DW
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 220
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 105/213 (49%), Gaps = 33/213 (15%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQL---DDTGFQGEKEFLVEVLMLSLMRHPNLVHLIG 136
+G+G +G V+ GK G+ VAVK ++ + E E VLM RH N++ I
Sbjct: 45 IGKGRYGEVWMGKW--RGEKVAVKVFFTTEEASWFRETEIYQTVLM----RHENILGFIA 98
Query: 137 YCAEGT----QRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHN- 191
+GT Q L+ +Y GSL D+L T LD + +K+A + GL +LH
Sbjct: 99 ADIKGTGSWTQLYLITDYHENGSLYDYLKSTT-----LDAKSMLKLAYSSVSGLCHLHTE 153
Query: 192 ----KADPPVIYRDLKAGNILLGKGFHPKLSDFGLA-KFGPTGDKSHV--STRVMGTHGY 244
+ P + +RDLK+ NIL+ K ++D GLA KF ++ + +TRV GT Y
Sbjct: 154 IFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRV-GTKRY 212
Query: 245 CAPEYATTG------KLTAKSDIFSFGVVLLEL 271
PE + +D++SFG++L E+
Sbjct: 213 MPPEVLDESLNRNHFQSYIMADMYSFGLILWEV 245
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 99/226 (43%), Gaps = 9/226 (3%)
Query: 68 VAATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLD-DTGFQGEKEFLVEVLMLSLM 126
V +++ LG+G +G V T + VAVK +D + E+ + ++
Sbjct: 2 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 61
Query: 127 RHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGL 186
H N+V G+ EG + L EY G L D + +P ++ AG
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV--- 118
Query: 187 EYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCA 246
YLH + +RD+K N+LL + + K+SDFGLA ++ + ++ GT Y A
Sbjct: 119 -YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVA 174
Query: 247 PEYATTGKLTAKS-DIFSFGVVLLELITGRPAMDDSQGHERMLVDW 291
PE + A+ D++S G+VL ++ G D + DW
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 220
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 99/226 (43%), Gaps = 9/226 (3%)
Query: 68 VAATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLD-DTGFQGEKEFLVEVLMLSLM 126
V +++ LG+G +G V T + VAVK +D + E+ + ++
Sbjct: 2 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 61
Query: 127 RHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGL 186
H N+V G+ EG + L EY G L D + +P ++ AG
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV--- 118
Query: 187 EYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCA 246
YLH + +RD+K N+LL + + K+SDFGLA ++ + ++ GT Y A
Sbjct: 119 -YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 174
Query: 247 PEYATTGKLTAKS-DIFSFGVVLLELITGRPAMDDSQGHERMLVDW 291
PE + A+ D++S G+VL ++ G D + DW
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 220
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 99/226 (43%), Gaps = 9/226 (3%)
Query: 68 VAATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLD-DTGFQGEKEFLVEVLMLSLM 126
V +++ LG+G +G V T + VAVK +D + E+ + ++
Sbjct: 2 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 61
Query: 127 RHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGL 186
H N+V G+ EG + L EY G L D + +P ++ AG
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV--- 118
Query: 187 EYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCA 246
YLH + +RD+K N+LL + + K+SDFGLA ++ + ++ GT Y A
Sbjct: 119 -YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 174
Query: 247 PEYATTGKLTAKS-DIFSFGVVLLELITGRPAMDDSQGHERMLVDW 291
PE + A+ D++S G+VL ++ G D + DW
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 220
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 95/214 (44%), Gaps = 9/214 (4%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLD-DTGFQGEKEFLVEVLMLSLMRHPNLVHLIGYC 138
LG+G +G V T + VAVK +D + E+ + ++ H N+V G+
Sbjct: 13 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 72
Query: 139 AEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVI 198
EG + L EY G L D + +P ++ AG YLH +
Sbjct: 73 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG---IT 125
Query: 199 YRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTGKLTAK 258
+RD+K N+LL + + K+SDFGLA ++ + ++ GT Y APE + A+
Sbjct: 126 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 185
Query: 259 S-DIFSFGVVLLELITGRPAMDDSQGHERMLVDW 291
D++S G+VL ++ G D + DW
Sbjct: 186 PVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 219
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 95/217 (43%), Gaps = 21/217 (9%)
Query: 66 QLVAATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEF---LVEVLM 122
Q A D F+ LG G FG V K ETG A+K LD K+ L E +
Sbjct: 36 QNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 95
Query: 123 LSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGA 182
L + P L L + + +V EY P G + HL + +P + R AA
Sbjct: 96 LQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEP---HARF-YAAQI 151
Query: 183 ARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTR---VM 239
EYLH+ +IYRDLK N+++ + + K++DFG AK V R +
Sbjct: 152 VLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAK--------RVKGRTWXLC 200
Query: 240 GTHGYCAPEYATTGKLTAKSDIFSFGVVLLELITGRP 276
GT Y APE + D ++ GV++ E+ G P
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 237
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 99/226 (43%), Gaps = 9/226 (3%)
Query: 68 VAATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLD-DTGFQGEKEFLVEVLMLSLM 126
V +++ LG+G +G V T + VAVK +D + E+ + ++
Sbjct: 3 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 62
Query: 127 RHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGL 186
H N+V G+ EG + L EY G L D + +P ++ AG
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV--- 119
Query: 187 EYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCA 246
YLH + +RD+K N+LL + + K+SDFGLA ++ + ++ GT Y A
Sbjct: 120 -YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 175
Query: 247 PEYATTGKLTAKS-DIFSFGVVLLELITGRPAMDDSQGHERMLVDW 291
PE + A+ D++S G+VL ++ G D + DW
Sbjct: 176 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 221
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 99/226 (43%), Gaps = 9/226 (3%)
Query: 68 VAATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLD-DTGFQGEKEFLVEVLMLSLM 126
V +++ LG+G +G V T + VAVK +D + E+ + ++
Sbjct: 3 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 62
Query: 127 RHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGL 186
H N+V G+ EG + L EY G L D + +P ++ AG
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV--- 119
Query: 187 EYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCA 246
YLH + +RD+K N+LL + + K+SDFGLA ++ + ++ GT Y A
Sbjct: 120 -YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 175
Query: 247 PEYATTGKLTAKS-DIFSFGVVLLELITGRPAMDDSQGHERMLVDW 291
PE + A+ D++S G+VL ++ G D + DW
Sbjct: 176 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 221
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 99/226 (43%), Gaps = 9/226 (3%)
Query: 68 VAATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLD-DTGFQGEKEFLVEVLMLSLM 126
V +++ LG+G +G V T + VAVK +D + E+ + ++
Sbjct: 2 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 61
Query: 127 RHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGL 186
H N+V G+ EG + L EY G L D + +P ++ AG
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV--- 118
Query: 187 EYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCA 246
YLH + +RD+K N+LL + + K+SDFGLA ++ + ++ GT Y A
Sbjct: 119 -YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 174
Query: 247 PEYATTGKLTAKS-DIFSFGVVLLELITGRPAMDDSQGHERMLVDW 291
PE + A+ D++S G+VL ++ G D + DW
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 220
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 91/202 (45%), Gaps = 8/202 (3%)
Query: 73 NFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQL---DDTGFQGEKEFLVEVLMLSLMRHP 129
NF+ +G+G F VY+ G VA+K++ D + + + E+ +L + HP
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHP 92
Query: 130 NLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYL 189
N++ E + +V E G L + + + + T K LE++
Sbjct: 93 NVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHM 152
Query: 190 HNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEY 249
H++ V++RD+K N+ + KL D GL +F K+ + ++GT Y +PE
Sbjct: 153 HSRR---VMHRDIKPANVFITATGVVKLGDLGLGRF--FSSKTTAAHSLVGTPYYMSPER 207
Query: 250 ATTGKLTAKSDIFSFGVVLLEL 271
KSDI+S G +L E+
Sbjct: 208 IHENGYNFKSDIWSLGCLLYEM 229
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 99/226 (43%), Gaps = 9/226 (3%)
Query: 68 VAATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLD-DTGFQGEKEFLVEVLMLSLM 126
V +++ LG+G +G V T + VAVK +D + E+ + ++
Sbjct: 3 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 62
Query: 127 RHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGL 186
H N+V G+ EG + L EY G L D + +P ++ AG
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV--- 119
Query: 187 EYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCA 246
YLH + +RD+K N+LL + + K+SDFGLA ++ + ++ GT Y A
Sbjct: 120 -YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 175
Query: 247 PEYATTGKLTAKS-DIFSFGVVLLELITGRPAMDDSQGHERMLVDW 291
PE + A+ D++S G+VL ++ G D + DW
Sbjct: 176 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 221
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 99/226 (43%), Gaps = 9/226 (3%)
Query: 68 VAATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLD-DTGFQGEKEFLVEVLMLSLM 126
V +++ LG+G +G V T + VAVK +D + E+ + ++
Sbjct: 2 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 61
Query: 127 RHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGL 186
H N+V G+ EG + L EY G L D + +P ++ AG
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV--- 118
Query: 187 EYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCA 246
YLH + +RD+K N+LL + + K+SDFGLA ++ + ++ GT Y A
Sbjct: 119 -YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVA 174
Query: 247 PEYATTGKLTAKS-DIFSFGVVLLELITGRPAMDDSQGHERMLVDW 291
PE + A+ D++S G+VL ++ G D + DW
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 220
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 95/217 (43%), Gaps = 21/217 (9%)
Query: 66 QLVAATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEF---LVEVLM 122
Q A D F+ LG G FG V K ETG A+K LD K+ L E +
Sbjct: 36 QNTAHLDQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 95
Query: 123 LSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGA 182
+ P LV L + + +V EY P G + HL + +P + R AA
Sbjct: 96 QQAVNFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEP---HARF-YAAQI 151
Query: 183 ARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTR---VM 239
EYLH+ +IYRDLK N+L+ + + K++DFG AK V R +
Sbjct: 152 VLTFEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAK--------RVKGRTWXLC 200
Query: 240 GTHGYCAPEYATTGKLTAKSDIFSFGVVLLELITGRP 276
GT Y APE + D ++ GV++ E+ G P
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 237
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 99/226 (43%), Gaps = 9/226 (3%)
Query: 68 VAATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLD-DTGFQGEKEFLVEVLMLSLM 126
V +++ LG+G +G V T + VAVK +D + E+ + ++
Sbjct: 2 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKML 61
Query: 127 RHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGL 186
H N+V G+ EG + L EY G L D + +P ++ AG
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV--- 118
Query: 187 EYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCA 246
YLH + +RD+K N+LL + + K+SDFGLA ++ + ++ GT Y A
Sbjct: 119 -YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 174
Query: 247 PEYATTGKLTAKS-DIFSFGVVLLELITGRPAMDDSQGHERMLVDW 291
PE + A+ D++S G+VL ++ G D + DW
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 220
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 104/209 (49%), Gaps = 15/209 (7%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLD-DTGFQGEKEFLV-EVLMLSLMRHP 129
+NF+ +G+G +G VYK + TG+VVA+ ++ DT +G + E+ +L + HP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 130 NLVHLIGYCAEGTQRLLVYEYM--PLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLE 187
N+V L+ + LV+E++ L D LT PL + ++ +GL
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDA-SALTGIPLPLIKSYLFQL----LQGLA 117
Query: 188 YLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAP 247
+ H+ V++RDLK N+L+ KL+DFGLA+ G T + T Y AP
Sbjct: 118 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTLWYRAP 172
Query: 248 EYATTGKLTAKS-DIFSFGVVLLELITGR 275
E K + + DI+S G + E++T R
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 104/209 (49%), Gaps = 15/209 (7%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLD-DTGFQGEKEFLV-EVLMLSLMRHP 129
+NF+ +G+G +G VYK + TG+VVA+ ++ DT +G + E+ +L + HP
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 130 NLVHLIGYCAEGTQRLLVYEYM--PLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLE 187
N+V L+ + LV+E++ L D LT PL + ++ +GL
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDA-SALTGIPLPLIKSYLFQL----LQGLA 116
Query: 188 YLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAP 247
+ H+ V++RDLK N+L+ KL+DFGLA+ G T + T Y AP
Sbjct: 117 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTLWYRAP 171
Query: 248 EYATTGKLTAKS-DIFSFGVVLLELITGR 275
E K + + DI+S G + E++T R
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 102/216 (47%), Gaps = 26/216 (12%)
Query: 80 LGQGGFGAVYKGKLA-------ETGQVVAVKQLDDTGFQGEKEFLV-EVLMLSLM-RHPN 130
LG+G FG V + + VAVK L D + + LV E+ M+ ++ +H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 131 LVHLIGYCAEGTQRLLVYEYMPLGSLEDHL-------------LGLTPEMKPLDWNTRMK 177
+++L+G C + ++ Y G+L ++L + PE + + + +
Sbjct: 103 IINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPE-EQMTFKDLVS 161
Query: 178 IAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTR 237
ARG+EYL A I+RDL A N+L+ + K++DFGLA+ D +T
Sbjct: 162 CTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 238 VMGTHGYCAPEYATTGKLTAKSDIFSFGVVLLELIT 273
+ APE T +SD++SFGV++ E+ T
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 107/212 (50%), Gaps = 16/212 (7%)
Query: 69 AATDNFKDTNFLGQGGFGAVY---KGKLAETGQVVAVKQLDDTGFQGEKEFL--VEVLML 123
A +F+ LGQG FG V+ K ++G + A+K L + +E +L
Sbjct: 25 ADPSHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDIL 84
Query: 124 SLMRHPNLVHL-IGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGA 182
+ + HP +V L + EG + L+ +++ G L L+ E+ + + + +A
Sbjct: 85 ADVNHPFVVKLHYAFQTEG-KLYLILDFLRGGDL---FTRLSKEVMFTEEDVKFYLAE-L 139
Query: 183 ARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTH 242
A GL++LH+ +IYRDLK NILL + H KL+DFGL+K +K S GT
Sbjct: 140 ALGLDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYS--FCGTV 194
Query: 243 GYCAPEYATTGKLTAKSDIFSFGVVLLELITG 274
Y APE + +D +S+GV++ E++TG
Sbjct: 195 EYMAPEVVNRQGHSHSADWWSYGVLMFEMLTG 226
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 113/250 (45%), Gaps = 30/250 (12%)
Query: 35 ERQETPARRNTLDDTLSAHENKNKENTFTYRQLVAATDNFKDTNFLGQGGFGAVYKG--- 91
+R+ P + + E + + R+L+ D LG G FG V KG
Sbjct: 337 QREALPMDTEVFESPFADPEEIRPKEVYLDRKLLTLEDKE-----LGSGNFGTVKKGYYQ 391
Query: 92 ---KLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLVHLIGYCAEGTQRLLVY 148
+ + + +D + E L E ++ + +P +V +IG C E +LV
Sbjct: 392 MKKVVKTVAVKILKNEANDPALK--DELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVM 448
Query: 149 EYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIYRDLKAGNIL 208
E LG L +L + + + +++ + G++YL + ++RDL A N+L
Sbjct: 449 EMAELGPLNKYL----QQNRHVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVL 501
Query: 209 LGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHG-----YCAPEYATTGKLTAKSDIFS 263
L + K+SDFGL+K D+++ + THG + APE K ++KSD++S
Sbjct: 502 LVTQHYAKISDFGLSK-ALRADENYYKAQ---THGKWPVKWYAPECINYYKFSSKSDVWS 557
Query: 264 FGVVLLELIT 273
FGV++ E +
Sbjct: 558 FGVLMWEAFS 567
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 95/217 (43%), Gaps = 21/217 (9%)
Query: 66 QLVAATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEF---LVEVLM 122
Q A D F+ LG G FG V K ETG A+K LD K+ L E +
Sbjct: 36 QNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 95
Query: 123 LSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGA 182
L + P L L + + +V EY P G + HL + +P + R AA
Sbjct: 96 LQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP---HARF-YAAQI 151
Query: 183 ARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTR---VM 239
EYLH+ +IYRDLK N+++ + + K++DFG AK V R +
Sbjct: 152 VLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAK--------RVKGRTWXLC 200
Query: 240 GTHGYCAPEYATTGKLTAKSDIFSFGVVLLELITGRP 276
GT Y APE + D ++ GV++ E+ G P
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 237
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 99/226 (43%), Gaps = 9/226 (3%)
Query: 68 VAATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLD-DTGFQGEKEFLVEVLMLSLM 126
V +++ LG+G +G V T + VAVK +D + E+ + ++
Sbjct: 3 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 62
Query: 127 RHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGL 186
H N+V G+ EG + L EY G L D + +P ++ AG
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV--- 119
Query: 187 EYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCA 246
YLH + +RD+K N+LL + + K+SDFGLA ++ + ++ GT Y A
Sbjct: 120 -YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 175
Query: 247 PEYATTGKLTAKS-DIFSFGVVLLELITGRPAMDDSQGHERMLVDW 291
PE + A+ D++S G+VL ++ G D + DW
Sbjct: 176 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 221
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 99/226 (43%), Gaps = 9/226 (3%)
Query: 68 VAATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLD-DTGFQGEKEFLVEVLMLSLM 126
V +++ LG+G +G V T + VAVK +D + E+ + ++
Sbjct: 3 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 62
Query: 127 RHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGL 186
H N+V G+ EG + L EY G L D + +P ++ AG
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV--- 119
Query: 187 EYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCA 246
YLH + +RD+K N+LL + + K+SDFGLA ++ + ++ GT Y A
Sbjct: 120 -YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 175
Query: 247 PEYATTGKLTAKS-DIFSFGVVLLELITGRPAMDDSQGHERMLVDW 291
PE + A+ D++S G+VL ++ G D + DW
Sbjct: 176 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 221
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 95/217 (43%), Gaps = 21/217 (9%)
Query: 66 QLVAATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEF---LVEVLM 122
Q A D F+ LG G FG V K ETG A+K LD K+ L E +
Sbjct: 36 QNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 95
Query: 123 LSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGA 182
L + P L L + + +V EY P G + HL + +P + R AA
Sbjct: 96 LQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP---HARF-YAAQI 151
Query: 183 ARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTR---VM 239
EYLH+ +IYRDLK N+++ + + K++DFG AK V R +
Sbjct: 152 VLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAK--------RVKGRTWXLC 200
Query: 240 GTHGYCAPEYATTGKLTAKSDIFSFGVVLLELITGRP 276
GT Y APE + D ++ GV++ E+ G P
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 237
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 99/226 (43%), Gaps = 9/226 (3%)
Query: 68 VAATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLD-DTGFQGEKEFLVEVLMLSLM 126
V +++ LG+G +G V T + VAVK +D + E+ + ++
Sbjct: 3 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 62
Query: 127 RHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGL 186
H N+V G+ EG + L EY G L D + +P ++ AG
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV--- 119
Query: 187 EYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCA 246
YLH + +RD+K N+LL + + K+SDFGLA ++ + ++ GT Y A
Sbjct: 120 -YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 175
Query: 247 PEYATTGKLTAKS-DIFSFGVVLLELITGRPAMDDSQGHERMLVDW 291
PE + A+ D++S G+VL ++ G D + DW
Sbjct: 176 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 221
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 107/213 (50%), Gaps = 19/213 (8%)
Query: 70 ATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLD-DTGFQGEKEFLV-EVLMLSLMR 127
+ +NF+ +G+G +G VYK + TG+VVA+K++ DT +G + E+ +L +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 128 HPNLVHLIGYCAEGTQRLLVYEYM--PLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARG 185
HPN+V L+ + LV+E++ L D LT PL + ++ +G
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEHVDQDLKKFMDA-SALTGIPLPLIKSYLFQL----LQG 118
Query: 186 LEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAK-FG-PTGDKSHVSTRVMGTHG 243
L + H+ V++RDLK N+L+ KL+DFGLA+ FG P H T
Sbjct: 119 LAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLW 171
Query: 244 YCAPEYATTGKLTAKS-DIFSFGVVLLELITGR 275
Y APE K + + DI+S G + E++T R
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 99/226 (43%), Gaps = 9/226 (3%)
Query: 68 VAATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLD-DTGFQGEKEFLVEVLMLSLM 126
V +++ LG+G +G V T + VAVK +D + E+ + ++
Sbjct: 3 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKML 62
Query: 127 RHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGL 186
H N+V G+ EG + L EY G L D + +P ++ AG
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV--- 119
Query: 187 EYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCA 246
YLH + +RD+K N+LL + + K+SDFGLA ++ + ++ GT Y A
Sbjct: 120 -YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVA 175
Query: 247 PEYATTGKLTAKS-DIFSFGVVLLELITGRPAMDDSQGHERMLVDW 291
PE + A+ D++S G+VL ++ G D + DW
Sbjct: 176 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 221
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 99/205 (48%), Gaps = 25/205 (12%)
Query: 80 LGQGGFGAVYKG------KLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLVH 133
LG G FG V KG + + + +D + E L E ++ + +P +V
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDE--LLAEANVMQQLDNPYIVR 92
Query: 134 LIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKA 193
+IG C E +LV E LG L +L + + + +++ + G++YL
Sbjct: 93 MIGIC-EAESWMLVMEMAELGPLNKYL----QQNRHVKDKNIIELVHQVSMGMKYLE--- 144
Query: 194 DPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHG-----YCAPE 248
+ ++RDL A N+LL + K+SDFGL+K D+++ + THG + APE
Sbjct: 145 ESNFVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQ---THGKWPVKWYAPE 200
Query: 249 YATTGKLTAKSDIFSFGVVLLELIT 273
K ++KSD++SFGV++ E +
Sbjct: 201 CINYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 99/226 (43%), Gaps = 9/226 (3%)
Query: 68 VAATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLD-DTGFQGEKEFLVEVLMLSLM 126
V +++ LG+G +G V T + VAVK +D + E+ + ++
Sbjct: 2 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKML 61
Query: 127 RHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGL 186
H N+V G+ EG + L EY G L D + +P ++ AG
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV--- 118
Query: 187 EYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCA 246
YLH + +RD+K N+LL + + K+SDFGLA ++ + ++ GT Y A
Sbjct: 119 -YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVA 174
Query: 247 PEYATTGKLTAKS-DIFSFGVVLLELITGRPAMDDSQGHERMLVDW 291
PE + A+ D++S G+VL ++ G D + DW
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 220
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 99/205 (48%), Gaps = 25/205 (12%)
Query: 80 LGQGGFGAVYKG------KLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLVH 133
LG G FG V KG + + + +D + E L E ++ + +P +V
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDE--LLAEANVMQQLDNPYIVR 92
Query: 134 LIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKA 193
+IG C E +LV E LG L +L + + + +++ + G++YL
Sbjct: 93 MIGIC-EAESWMLVMEMAELGPLNKYL----QQNRHVKDKNIIELVHQVSMGMKYLE--- 144
Query: 194 DPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHG-----YCAPE 248
+ ++RDL A N+LL + K+SDFGL+K D+++ + THG + APE
Sbjct: 145 ESNFVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQ---THGKWPVKWYAPE 200
Query: 249 YATTGKLTAKSDIFSFGVVLLELIT 273
K ++KSD++SFGV++ E +
Sbjct: 201 CINYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 106/224 (47%), Gaps = 21/224 (9%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKE-----FLVEVLMLSLMRHPNLVHL 134
+GQG FG V+K + +TGQ VA+K++ + EKE L E+ +L L++H N+V+L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKV---LMENEKEGFPITALREIKILQLLKHENVVNL 82
Query: 135 IGYC---AEGTQRLLVYEYMPLGSLEDHLLGLTPE-MKPLDWNTRMKIAAGAARGLEYLH 190
I C A R Y+ E L GL + + ++ GL Y+H
Sbjct: 83 IEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIH 142
Query: 191 NKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAK---FGPTGDKSHVSTRVMGTHGYCAP 247
+++RD+KA N+L+ + KL+DFGLA+ + RV+ T Y P
Sbjct: 143 RNK---ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV-TLWYRPP 198
Query: 248 EYATTGK-LTAKSDIFSFGVVLLELITGRPAMD-DSQGHERMLV 289
E + D++ G ++ E+ T P M +++ H+ L+
Sbjct: 199 ELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALI 242
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 99/205 (48%), Gaps = 25/205 (12%)
Query: 80 LGQGGFGAVYKG------KLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLVH 133
LG G FG V KG + + + +D + E L E ++ + +P +V
Sbjct: 13 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALK--DELLAEANVMQQLDNPYIVR 70
Query: 134 LIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKA 193
+IG C E +LV E LG L +L + + + +++ + G++YL
Sbjct: 71 MIGIC-EAESWMLVMEMAELGPLNKYL----QQNRHVKDKNIIELVHQVSMGMKYLE--- 122
Query: 194 DPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHG-----YCAPE 248
+ ++RDL A N+LL + K+SDFGL+K D+++ + THG + APE
Sbjct: 123 ESNFVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQ---THGKWPVKWYAPE 178
Query: 249 YATTGKLTAKSDIFSFGVVLLELIT 273
K ++KSD++SFGV++ E +
Sbjct: 179 CINYYKFSSKSDVWSFGVLMWEAFS 203
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 99/205 (48%), Gaps = 25/205 (12%)
Query: 80 LGQGGFGAVYKG------KLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLVH 133
LG G FG V KG + + + +D + E L E ++ + +P +V
Sbjct: 15 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALK--DELLAEANVMQQLDNPYIVR 72
Query: 134 LIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKA 193
+IG C E +LV E LG L +L + + + +++ + G++YL
Sbjct: 73 MIGIC-EAESWMLVMEMAELGPLNKYL----QQNRHVKDKNIIELVHQVSMGMKYLE--- 124
Query: 194 DPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHG-----YCAPE 248
+ ++RDL A N+LL + K+SDFGL+K D+++ + THG + APE
Sbjct: 125 ESNFVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQ---THGKWPVKWYAPE 180
Query: 249 YATTGKLTAKSDIFSFGVVLLELIT 273
K ++KSD++SFGV++ E +
Sbjct: 181 CINYYKFSSKSDVWSFGVLMWEAFS 205
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 99/205 (48%), Gaps = 25/205 (12%)
Query: 80 LGQGGFGAVYKG------KLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLVH 133
LG G FG V KG + + + +D + E L E ++ + +P +V
Sbjct: 25 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDE--LLAEANVMQQLDNPYIVR 82
Query: 134 LIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKA 193
+IG C E +LV E LG L +L + + + +++ + G++YL
Sbjct: 83 MIGIC-EAESWMLVMEMAELGPLNKYL----QQNRHVKDKNIIELVHQVSMGMKYLE--- 134
Query: 194 DPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHG-----YCAPE 248
+ ++RDL A N+LL + K+SDFGL+K D+++ + THG + APE
Sbjct: 135 ESNFVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQ---THGKWPVKWYAPE 190
Query: 249 YATTGKLTAKSDIFSFGVVLLELIT 273
K ++KSD++SFGV++ E +
Sbjct: 191 CINYYKFSSKSDVWSFGVLMWEAFS 215
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 99/205 (48%), Gaps = 25/205 (12%)
Query: 80 LGQGGFGAVYKG------KLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLVH 133
LG G FG V KG + + + +D + E L E ++ + +P +V
Sbjct: 33 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALK--DELLAEANVMQQLDNPYIVR 90
Query: 134 LIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKA 193
+IG C E +LV E LG L +L + + + +++ + G++YL
Sbjct: 91 MIGIC-EAESWMLVMEMAELGPLNKYL----QQNRHVKDKNIIELVHQVSMGMKYLE--- 142
Query: 194 DPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHG-----YCAPE 248
+ ++RDL A N+LL + K+SDFGL+K D+++ + THG + APE
Sbjct: 143 ESNFVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQ---THGKWPVKWYAPE 198
Query: 249 YATTGKLTAKSDIFSFGVVLLELIT 273
K ++KSD++SFGV++ E +
Sbjct: 199 CINYYKFSSKSDVWSFGVLMWEAFS 223
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 99/205 (48%), Gaps = 25/205 (12%)
Query: 80 LGQGGFGAVYKG------KLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLVH 133
LG G FG V KG + + + +D + E L E ++ + +P +V
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALK--DELLAEANVMQQLDNPYIVR 76
Query: 134 LIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKA 193
+IG C E +LV E LG L +L + + + +++ + G++YL
Sbjct: 77 MIGIC-EAESWMLVMEMAELGPLNKYL----QQNRHVKDKNIIELVHQVSMGMKYLE--- 128
Query: 194 DPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHG-----YCAPE 248
+ ++RDL A N+LL + K+SDFGL+K D+++ + THG + APE
Sbjct: 129 ESNFVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQ---THGKWPVKWYAPE 184
Query: 249 YATTGKLTAKSDIFSFGVVLLELIT 273
K ++KSD++SFGV++ E +
Sbjct: 185 CINYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 102/231 (44%), Gaps = 24/231 (10%)
Query: 51 SAHENKNKENTFTYRQLVAATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGF 110
S EN + TF R + LG+G FG V K K T Q AVK ++
Sbjct: 9 SGRENLYFQGTFAERYNIVC--------MLGKGSFGEVLKCKDRITQQEYAVKVINKASA 60
Query: 111 QGE--KEFLVEVLMLSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMK 168
+ + L EV +L + HPN++ L + + +V E G L D ++ + K
Sbjct: 61 KNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEII----KRK 116
Query: 169 PLDWNTRMKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLG---KGFHPKLSDFGLAKF 225
+ +I G+ Y+H +++RDLK NILL K K+ DFGL+
Sbjct: 117 RFSEHDAARIIKQVFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTC 173
Query: 226 GPTGDKSHVSTRVMGTHGYCAPEYATTGKLTAKSDIFSFGVVLLELITGRP 276
K + R+ GT Y APE G K D++S GV+L L++G P
Sbjct: 174 FQQNTK--MKDRI-GTAYYIAPE-VLRGTYDEKCDVWSAGVILYILLSGTP 220
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 102/231 (44%), Gaps = 24/231 (10%)
Query: 51 SAHENKNKENTFTYRQLVAATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGF 110
S EN + TF R + LG+G FG V K K T Q AVK ++
Sbjct: 9 SGRENLYFQGTFAERYNIVC--------MLGKGSFGEVLKCKDRITQQEYAVKVINKASA 60
Query: 111 QGE--KEFLVEVLMLSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMK 168
+ + L EV +L + HPN++ L + + +V E G L D ++ + K
Sbjct: 61 KNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEII----KRK 116
Query: 169 PLDWNTRMKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLG---KGFHPKLSDFGLAKF 225
+ +I G+ Y+H +++RDLK NILL K K+ DFGL+
Sbjct: 117 RFSEHDAARIIKQVFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTC 173
Query: 226 GPTGDKSHVSTRVMGTHGYCAPEYATTGKLTAKSDIFSFGVVLLELITGRP 276
K + R+ GT Y APE G K D++S GV+L L++G P
Sbjct: 174 FQQNTK--MKDRI-GTAYYIAPE-VLRGTYDEKCDVWSAGVILYILLSGTP 220
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 98/198 (49%), Gaps = 12/198 (6%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLVHLIGYCA 139
+G+G G V + +G+ VAVK +D Q + EV+++ +H N+V +
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYL 112
Query: 140 EGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIY 199
G + ++ E++ G+L D + +++ L+ + + L YLH + VI+
Sbjct: 113 VGEELWVLMEFLQGGALTD----IVSQVR-LNEEQIATVCEAVLQALAYLHAQG---VIH 164
Query: 200 RDLKAGNILLGKGFHPKLSDFGL-AKFGPTGDKSHVSTRVMGTHGYCAPEYATTGKLTAK 258
RD+K+ +ILL KLSDFG A+ K ++GT + APE + +
Sbjct: 165 RDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRK---XLVGTPYWMAPEVISRSLYATE 221
Query: 259 SDIFSFGVVLLELITGRP 276
DI+S G++++E++ G P
Sbjct: 222 VDIWSLGIMVIEMVDGEP 239
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 106/224 (47%), Gaps = 21/224 (9%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKE-----FLVEVLMLSLMRHPNLVHL 134
+GQG FG V+K + +TGQ VA+K++ + EKE L E+ +L L++H N+V+L
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKV---LMENEKEGFPITALREIKILQLLKHENVVNL 81
Query: 135 IGYC---AEGTQRLLVYEYMPLGSLEDHLLGLTPE-MKPLDWNTRMKIAAGAARGLEYLH 190
I C A R Y+ E L GL + + ++ GL Y+H
Sbjct: 82 IEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIH 141
Query: 191 NKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAK---FGPTGDKSHVSTRVMGTHGYCAP 247
+++RD+KA N+L+ + KL+DFGLA+ + RV+ T Y P
Sbjct: 142 RNK---ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV-TLWYRPP 197
Query: 248 EYATTGK-LTAKSDIFSFGVVLLELITGRPAMD-DSQGHERMLV 289
E + D++ G ++ E+ T P M +++ H+ L+
Sbjct: 198 ELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALI 241
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 102/231 (44%), Gaps = 24/231 (10%)
Query: 51 SAHENKNKENTFTYRQLVAATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGF 110
S EN + TF R + LG+G FG V K K T Q AVK ++
Sbjct: 9 SGRENLYFQGTFAERYNIVC--------MLGKGSFGEVLKCKDRITQQEYAVKVINKASA 60
Query: 111 QGE--KEFLVEVLMLSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMK 168
+ + L EV +L + HPN++ L + + +V E G L D ++ + K
Sbjct: 61 KNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEII----KRK 116
Query: 169 PLDWNTRMKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLG---KGFHPKLSDFGLAKF 225
+ +I G+ Y+H +++RDLK NILL K K+ DFGL+
Sbjct: 117 RFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTC 173
Query: 226 GPTGDKSHVSTRVMGTHGYCAPEYATTGKLTAKSDIFSFGVVLLELITGRP 276
K + R+ GT Y APE G K D++S GV+L L++G P
Sbjct: 174 FQQNTK--MKDRI-GTAYYIAPE-VLRGTYDEKCDVWSAGVILYILLSGTP 220
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 106/224 (47%), Gaps = 21/224 (9%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKE-----FLVEVLMLSLMRHPNLVHL 134
+GQG FG V+K + +TGQ VA+K++ + EKE L E+ +L L++H N+V+L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKV---LMENEKEGFPITALREIKILQLLKHENVVNL 82
Query: 135 IGYC---AEGTQRLLVYEYMPLGSLEDHLLGLTPE-MKPLDWNTRMKIAAGAARGLEYLH 190
I C A R Y+ E L GL + + ++ GL Y+H
Sbjct: 83 IEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIH 142
Query: 191 NKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAK---FGPTGDKSHVSTRVMGTHGYCAP 247
+++RD+KA N+L+ + KL+DFGLA+ + RV+ T Y P
Sbjct: 143 RNK---ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV-TLWYRPP 198
Query: 248 EYATTGK-LTAKSDIFSFGVVLLELITGRPAMD-DSQGHERMLV 289
E + D++ G ++ E+ T P M +++ H+ L+
Sbjct: 199 ELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALI 242
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 102/230 (44%), Gaps = 43/230 (18%)
Query: 73 NFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLV 132
+FK+ +G GGFG V+K K G+ ++++ + E+E V L+ + H N+V
Sbjct: 13 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAERE----VKALAKLDHVNIV 68
Query: 133 HLIGYCAEG-----------------------------TQRLLV-YEYMPLGSLEDHLLG 162
H G C +G T+ L + E+ G+LE +
Sbjct: 69 HYNG-CWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEK 127
Query: 163 LTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGL 222
E LD +++ +G++Y+H+K +I+RDLK NI L K+ DFGL
Sbjct: 128 RRGE--KLDKVLALELFEQITKGVDYIHSK---KLIHRDLKPSNIFLVDTKQVKIGDFGL 182
Query: 223 AKFGPTGDKSHVSTRVMGTHGYCAPEYATTGKLTAKSDIFSFGVVLLELI 272
K TR GT Y +PE ++ + D+++ G++L EL+
Sbjct: 183 VTSLKNDGKR---TRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 99/221 (44%), Gaps = 17/221 (7%)
Query: 71 TDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQ---GEKEFLVEVLMLSLMR 127
+D +K LG+G FG V K TGQ AVK + + ++ L EV +L +
Sbjct: 31 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 90
Query: 128 HPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLE 187
HPN++ L + + LV E G L D ++ K +I G+
Sbjct: 91 HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIIS----RKRFSEVDAARIIRQVLSGIT 146
Query: 188 YLHNKADPPVIYRDLKAGNILL---GKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGY 244
Y+H +++RDLK N+LL K + ++ DFGL+ K +GT Y
Sbjct: 147 YMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDK---IGTAYY 200
Query: 245 CAPEYATTGKLTAKSDIFSFGVVLLELITGRPAMDDSQGHE 285
APE G K D++S GV+L L++G P + + ++
Sbjct: 201 IAPE-VLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYD 240
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 96/217 (44%), Gaps = 21/217 (9%)
Query: 66 QLVAATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEF---LVEVLM 122
Q A D F+ LG G FG V K ETG A+K LD K+ L E +
Sbjct: 35 QNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 123 LSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGA 182
L + P LV L + + +V EY+ G + HL + +P + R AA
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-YAAQI 150
Query: 183 ARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTR---VM 239
EYLH+ +IYRDLK N+L+ + + +++DFG AK V R +
Sbjct: 151 VLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLC 199
Query: 240 GTHGYCAPEYATTGKLTAKSDIFSFGVVLLELITGRP 276
GT Y APE + D ++ GV++ E+ G P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 95/200 (47%), Gaps = 11/200 (5%)
Query: 77 TNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLVHLIG 136
T LG G FG V+K + TG +A K + G + ++E E+ +++ + H NL+ L
Sbjct: 94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYD 153
Query: 137 YCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPP 196
+LV EY+ G L D ++ + + LD MK G+ ++H
Sbjct: 154 AFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMK---QICEGIRHMHQMY--- 207
Query: 197 VIYRDLKAGNILL--GKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTGK 254
+++ DLK NIL K+ DFGLA+ +K V+ GT + APE
Sbjct: 208 ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVN---FGTPEFLAPEVVNYDF 264
Query: 255 LTAKSDIFSFGVVLLELITG 274
++ +D++S GV+ L++G
Sbjct: 265 VSFPTDMWSVGVIAYMLLSG 284
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 95/212 (44%), Gaps = 17/212 (8%)
Query: 71 TDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQ---GEKEFLVEVLMLSLMR 127
+D +K LG+G FG V K TGQ AVK + + ++ L EV +L +
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 84
Query: 128 HPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLE 187
HPN++ L + + LV E G L D ++ K +I G+
Sbjct: 85 HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIIS----RKRFSEVDAARIIRQVLSGIT 140
Query: 188 YLHNKADPPVIYRDLKAGNILL---GKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGY 244
Y+H +++RDLK N+LL K + ++ DFGL+ K +GT Y
Sbjct: 141 YMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDK---IGTAYY 194
Query: 245 CAPEYATTGKLTAKSDIFSFGVVLLELITGRP 276
APE G K D++S GV+L L++G P
Sbjct: 195 IAPE-VLHGTYDEKCDVWSTGVILYILLSGCP 225
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 113/250 (45%), Gaps = 30/250 (12%)
Query: 35 ERQETPARRNTLDDTLSAHENKNKENTFTYRQLVAATDNFKDTNFLGQGGFGAVYKG--- 91
+R+ P + + E + + R+L+ D LG G FG V KG
Sbjct: 338 QREALPMDTEVYESPYADPEEIRPKEVYLDRKLLTLEDKE-----LGSGNFGTVKKGYYQ 392
Query: 92 ---KLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLVHLIGYCAEGTQRLLVY 148
+ + + +D + E L E ++ + +P +V +IG C E +LV
Sbjct: 393 MKKVVKTVAVKILKNEANDPALK--DELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVM 449
Query: 149 EYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIYRDLKAGNIL 208
E LG L +L + + + +++ + G++YL + ++RDL A N+L
Sbjct: 450 EMAELGPLNKYL----QQNRHVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVL 502
Query: 209 LGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHG-----YCAPEYATTGKLTAKSDIFS 263
L + K+SDFGL+K D+++ + THG + APE K ++KSD++S
Sbjct: 503 LVTQHYAKISDFGLSK-ALRADENYYKAQ---THGKWPVKWYAPECINYYKFSSKSDVWS 558
Query: 264 FGVVLLELIT 273
FGV++ E +
Sbjct: 559 FGVLMWEAFS 568
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 98/205 (47%), Gaps = 25/205 (12%)
Query: 80 LGQGGFGAVYKG------KLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLVH 133
LG G FG V KG + + + +D + E L E ++ + +P +V
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALK--DELLAEANVMQQLDNPYIVR 76
Query: 134 LIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKA 193
+IG C E +LV E LG L +L + + + +++ + G++YL
Sbjct: 77 MIGIC-EAESWMLVMEMAELGPLNKYL----QQNRHVKDKNIIELVHQVSMGMKYLE--- 128
Query: 194 DPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHG-----YCAPE 248
+ ++RDL A N+LL + K+SDFGL+K D++ + THG + APE
Sbjct: 129 ESNFVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENXYKAQ---THGKWPVKWYAPE 184
Query: 249 YATTGKLTAKSDIFSFGVVLLELIT 273
K ++KSD++SFGV++ E +
Sbjct: 185 CINYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 95/212 (44%), Gaps = 17/212 (8%)
Query: 71 TDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQ---GEKEFLVEVLMLSLMR 127
+D +K LG+G FG V K TGQ AVK + + ++ L EV +L +
Sbjct: 48 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 107
Query: 128 HPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLE 187
HPN++ L + + LV E G L D ++ K +I G+
Sbjct: 108 HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIIS----RKRFSEVDAARIIRQVLSGIT 163
Query: 188 YLHNKADPPVIYRDLKAGNILL---GKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGY 244
Y+H +++RDLK N+LL K + ++ DFGL+ K +GT Y
Sbjct: 164 YMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDK---IGTAYY 217
Query: 245 CAPEYATTGKLTAKSDIFSFGVVLLELITGRP 276
APE G K D++S GV+L L++G P
Sbjct: 218 IAPE-VLHGTYDEKCDVWSTGVILYILLSGCP 248
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 95/212 (44%), Gaps = 17/212 (8%)
Query: 71 TDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQ---GEKEFLVEVLMLSLMR 127
+D +K LG+G FG V K TGQ AVK + + ++ L EV +L +
Sbjct: 49 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 108
Query: 128 HPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLE 187
HPN++ L + + LV E G L D ++ K +I G+
Sbjct: 109 HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIIS----RKRFSEVDAARIIRQVLSGIT 164
Query: 188 YLHNKADPPVIYRDLKAGNILL---GKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGY 244
Y+H +++RDLK N+LL K + ++ DFGL+ K +GT Y
Sbjct: 165 YMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDK---IGTAYY 218
Query: 245 CAPEYATTGKLTAKSDIFSFGVVLLELITGRP 276
APE G K D++S GV+L L++G P
Sbjct: 219 IAPE-VLHGTYDEKCDVWSTGVILYILLSGCP 249
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 99/220 (45%), Gaps = 22/220 (10%)
Query: 70 ATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFL--VEVLMLSLMR 127
AT ++ +G G +G VYK + +G VA+K + G L V ++L+R
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLR 66
Query: 128 ------HPNLVHLIGYCAEG-TQR----LLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRM 176
HPN+V L+ CA T R LV+E++ L +L P P + T
Sbjct: 67 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAE--TIK 123
Query: 177 KIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVST 236
+ RGL++LH +++RDLK NIL+ G KL+DFGLA+ T
Sbjct: 124 DLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARI---YSYQMALT 177
Query: 237 RVMGTHGYCAPEYATTGKLTAKSDIFSFGVVLLELITGRP 276
V+ T Y APE D++S G + E+ +P
Sbjct: 178 PVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKP 217
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 98/226 (43%), Gaps = 9/226 (3%)
Query: 68 VAATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLD-DTGFQGEKEFLVEVLMLSLM 126
V +++ LG+G G V T + VAVK +D + E+ + ++
Sbjct: 2 VPFVEDWDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 61
Query: 127 RHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGL 186
H N+V G+ EG + L EY G L D + +P ++ AG
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV--- 118
Query: 187 EYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCA 246
YLH + +RD+K N+LL + + K+SDFGLA ++ + ++ GT Y A
Sbjct: 119 -YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 174
Query: 247 PEYATTGKLTAKS-DIFSFGVVLLELITGRPAMDDSQGHERMLVDW 291
PE + A+ D++S G+VL ++ G D + DW
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 220
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 103/214 (48%), Gaps = 17/214 (7%)
Query: 71 TDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLV---EVLMLSLMR 127
++ KD +G+G +G+V K +GQ++AVK++ T + E++ L+ +V+M S
Sbjct: 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRS-SD 79
Query: 128 HPNLVHLIGYCAEGTQRLLVYEYMP--LGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARG 185
P +V G + E M ++ + ++ P + ++ +A A
Sbjct: 80 CPYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALN 139
Query: 186 LEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYC 245
H K + +I+RD+K NILL + + KL DFG++ G D S TR G Y
Sbjct: 140 ----HLKENLKIIHRDIKPSNILLDRSGNIKLCDFGIS--GQLVD-SIAKTRDAGCRPYM 192
Query: 246 APE----YATTGKLTAKSDIFSFGVVLLELITGR 275
APE A+ +SD++S G+ L EL TGR
Sbjct: 193 APERIDPSASRQGYDVRSDVWSLGITLYELATGR 226
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 116/264 (43%), Gaps = 15/264 (5%)
Query: 16 KPKINEDKDSPGPSRIDTVERQETPARRNTLDDTLSAHENKNKENTFTY---RQLVAATD 72
+P+ ++ P ++ E+Q + ++ +T E ++E+T+T R +
Sbjct: 331 RPQKEGERALPSIPKLANNEKQGVRSHTVSVSETDDYAEIIDEEDTYTMPSTRDYEIQRE 390
Query: 73 NFKDTNFLGQGGFGAVYKGKLAET---GQVVAVKQLDDTGFQGEKE-FLVEVLMLSLMRH 128
+ +G+G FG V++G VA+K + +E FL E L + H
Sbjct: 391 RIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDH 450
Query: 129 PNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEY 188
P++V LIG E V+ M L +L + L LD + + A + L Y
Sbjct: 451 PHIVKLIGVITENP----VWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAY 506
Query: 189 LHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPE 248
L +K ++RD+ A N+L+ KL DFGL+++ S + + APE
Sbjct: 507 LESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK-WMAPE 562
Query: 249 YATTGKLTAKSDIFSFGVVLLELI 272
+ T+ SD++ FGV + E++
Sbjct: 563 SINFRRFTSASDVWMFGVCMWEIL 586
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 100/208 (48%), Gaps = 18/208 (8%)
Query: 76 DTNFL---GQGGFGAVYKGKLAETGQVVAVKQLD-DTGFQGE--KEFLVEVLMLSLMRHP 129
D NFL G+G FG V + T ++ AVK L D Q + + +VE +L+L P
Sbjct: 342 DFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKP 401
Query: 130 NLVHLIGYCAEGTQRL-LVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEY 188
+ + C + RL V EY+ G L H+ + +P + AA A GL +
Sbjct: 402 PFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEP----HAVFYAAEIAIGLFF 457
Query: 189 LHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVM-GTHGYCAP 247
L +K +IYRDLK N++L H K++DFG+ K V+T+ GT Y AP
Sbjct: 458 LQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCK---ENIWDGVTTKXFCGTPDYIAP 511
Query: 248 EYATTGKLTAKSDIFSFGVVLLELITGR 275
E D ++FGV+L E++ G+
Sbjct: 512 EIIAYQPYGKSVDWWAFGVLLYEMLAGQ 539
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 100/219 (45%), Gaps = 23/219 (10%)
Query: 70 ATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVE-VLMLSLMR- 127
AT ++ +G G +G VYK + +G VA+K + GE+ + V ++L+R
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPN--GEEGLPISTVREVALLRR 59
Query: 128 -----HPNLVHLIGYCAEG-TQR----LLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMK 177
HPN+V L+ CA T R LV+E++ L +L P P + T
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAE--TIKD 116
Query: 178 IAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTR 237
+ RGL++LH +++RDLK NIL+ G KL+DFGLA+
Sbjct: 117 LMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARI---YSYQMALAP 170
Query: 238 VMGTHGYCAPEYATTGKLTAKSDIFSFGVVLLELITGRP 276
V+ T Y APE D++S G + E+ +P
Sbjct: 171 VVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKP 209
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 95/217 (43%), Gaps = 21/217 (9%)
Query: 66 QLVAATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEF---LVEVLM 122
Q A D F LG G FG V K E+G A+K LD K+ L E +
Sbjct: 35 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 123 LSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGA 182
L + P LV L + + +V EY+ G + HL + +P + R AA
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEP---HARF-YAAQI 150
Query: 183 ARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTR---VM 239
EYLH+ +IYRDLK N+L+ + + +++DFG AK V R +
Sbjct: 151 VLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLC 199
Query: 240 GTHGYCAPEYATTGKLTAKSDIFSFGVVLLELITGRP 276
GT Y APE + D ++ GV++ E+ G P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 95/217 (43%), Gaps = 21/217 (9%)
Query: 66 QLVAATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEF---LVEVLM 122
Q A D F LG G FG V K E+G A+K LD K+ L E +
Sbjct: 35 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 123 LSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGA 182
L + P LV L + + +V EY+ G + HL + +P + R AA
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEP---HARF-YAAQI 150
Query: 183 ARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTR---VM 239
EYLH+ +IYRDLK N+L+ + + +++DFG AK V R +
Sbjct: 151 VLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLC 199
Query: 240 GTHGYCAPEYATTGKLTAKSDIFSFGVVLLELITGRP 276
GT Y APE + D ++ GV++ E+ G P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 95/217 (43%), Gaps = 21/217 (9%)
Query: 66 QLVAATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEF---LVEVLM 122
Q A D F LG G FG V K E+G A+K LD K+ L E +
Sbjct: 30 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI 89
Query: 123 LSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGA 182
L + P LV L + + +V EY+ G + HL + +P + R AA
Sbjct: 90 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEP---HARF-YAAQI 145
Query: 183 ARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTR---VM 239
EYLH+ +IYRDLK N+L+ + + +++DFG AK V R +
Sbjct: 146 VLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLC 194
Query: 240 GTHGYCAPEYATTGKLTAKSDIFSFGVVLLELITGRP 276
GT Y APE + D ++ GV++ E+ G P
Sbjct: 195 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 231
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 95/217 (43%), Gaps = 21/217 (9%)
Query: 66 QLVAATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEF---LVEVLM 122
Q A D F LG G FG V K E+G A+K LD K+ L E +
Sbjct: 35 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 123 LSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGA 182
L + P LV L + + +V EY+ G + HL + +P + R AA
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEP---HARF-YAAQI 150
Query: 183 ARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTR---VM 239
EYLH+ +IYRDLK N+L+ + + +++DFG AK V R +
Sbjct: 151 VLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLC 199
Query: 240 GTHGYCAPEYATTGKLTAKSDIFSFGVVLLELITGRP 276
GT Y APE + D ++ GV++ E+ G P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 95/217 (43%), Gaps = 21/217 (9%)
Query: 66 QLVAATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEF---LVEVLM 122
Q A D F LG G FG V K E+G A+K LD K+ L E +
Sbjct: 35 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 123 LSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGA 182
L + P LV L + + +V EY+ G + HL + +P + R AA
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEP---HARF-YAAQI 150
Query: 183 ARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTR---VM 239
EYLH+ +IYRDLK N+L+ + + +++DFG AK V R +
Sbjct: 151 VLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLC 199
Query: 240 GTHGYCAPEYATTGKLTAKSDIFSFGVVLLELITGRP 276
GT Y APE + D ++ GV++ E+ G P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 100/219 (45%), Gaps = 23/219 (10%)
Query: 70 ATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVE-VLMLSLMR- 127
AT ++ +G G +G VYK + +G VA+K + GE+ + V ++L+R
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVP--NGEEGLPISTVREVALLRR 59
Query: 128 -----HPNLVHLIGYCAEG-TQR----LLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMK 177
HPN+V L+ CA T R LV+E++ L +L P P + T
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAE--TIKD 116
Query: 178 IAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTR 237
+ RGL++LH +++RDLK NIL+ G KL+DFGLA+
Sbjct: 117 LMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARI---YSYQMALDP 170
Query: 238 VMGTHGYCAPEYATTGKLTAKSDIFSFGVVLLELITGRP 276
V+ T Y APE D++S G + E+ +P
Sbjct: 171 VVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKP 209
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 100/208 (48%), Gaps = 18/208 (8%)
Query: 76 DTNFL---GQGGFGAVYKGKLAETGQVVAVKQLD-DTGFQGE--KEFLVEVLMLSLMRHP 129
D NFL G+G FG V + T ++ AVK L D Q + + +VE +L+L P
Sbjct: 21 DFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKP 80
Query: 130 NLVHLIGYCAEGTQRL-LVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEY 188
+ + C + RL V EY+ G L H+ + +P + AA A GL +
Sbjct: 81 PFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEP----HAVFYAAEIAIGLFF 136
Query: 189 LHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVM-GTHGYCAP 247
L +K +IYRDLK N++L H K++DFG+ K V+T+ GT Y AP
Sbjct: 137 LQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCK---ENIWDGVTTKXFCGTPDYIAP 190
Query: 248 EYATTGKLTAKSDIFSFGVVLLELITGR 275
E D ++FGV+L E++ G+
Sbjct: 191 EIIAYQPYGKSVDWWAFGVLLYEMLAGQ 218
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 95/206 (46%), Gaps = 7/206 (3%)
Query: 74 FKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGE-KEFLVEVLMLSLMRHPNLV 132
+ + +++G+G +G V VA+K++ Q + L E+ +L RH N++
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 133 HLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNK 192
+ T + Y+ +E L L + + L + RGL+Y+H+
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLL-KTQHLSNDHICYFLYQILRGLKYIHSA 143
Query: 193 ADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFG-PTGDKSHVSTRVMGTHGYCAPEYAT 251
V++RDLK N+LL K+ DFGLA+ P D + T + T Y APE
Sbjct: 144 N---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 200
Query: 252 TGKLTAKS-DIFSFGVVLLELITGRP 276
K KS DI+S G +L E+++ RP
Sbjct: 201 NSKGYTKSIDIWSVGCILAEMLSNRP 226
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 96/204 (47%), Gaps = 12/204 (5%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGE-KEFLVEVLMLSLMRHPNLVHLIGYC 138
+G GGF V TG++VA+K +D + E+ L +RH ++ L
Sbjct: 18 IGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVL 77
Query: 139 AEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVI 198
+ +V EY P G L D+++ + + + TR+ + + Y+H++
Sbjct: 78 ETANKIFMVLEYCPGGELFDYIIS---QDRLSEEETRV-VFRQIVSAVAYVHSQG---YA 130
Query: 199 YRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTGK--LT 256
+RDLK N+L + KL DFGL P G+K + G+ Y APE GK L
Sbjct: 131 HRDLKPENLLFDEYHKLKLIDFGLCA-KPKGNKDYHLQTCCGSLAYAAPE-LIQGKSYLG 188
Query: 257 AKSDIFSFGVVLLELITGRPAMDD 280
+++D++S G++L L+ G DD
Sbjct: 189 SEADVWSMGILLYVLMCGFLPFDD 212
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 95/206 (46%), Gaps = 7/206 (3%)
Query: 74 FKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGE-KEFLVEVLMLSLMRHPNLV 132
+ + +++G+G +G V VA+K++ Q + L E+ +L RH N++
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENII 86
Query: 133 HLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNK 192
+ T + Y+ +E L L + + L + RGL+Y+H+
Sbjct: 87 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLL-KTQHLSNDHICYFLYQILRGLKYIHSA 145
Query: 193 ADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFG-PTGDKSHVSTRVMGTHGYCAPEYAT 251
V++RDLK N+LL K+ DFGLA+ P D + T + T Y APE
Sbjct: 146 N---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 202
Query: 252 TGKLTAKS-DIFSFGVVLLELITGRP 276
K KS DI+S G +L E+++ RP
Sbjct: 203 NSKGYTKSIDIWSVGCILAEMLSNRP 228
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 95/217 (43%), Gaps = 21/217 (9%)
Query: 66 QLVAATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEF---LVEVLM 122
Q A D F LG G FG V K E+G A+K LD K+ L E +
Sbjct: 35 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 123 LSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGA 182
L + P LV L + + +V EY+ G + HL + +P + R AA
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-YAAQI 150
Query: 183 ARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTR---VM 239
EYLH+ +IYRDLK N+L+ + + +++DFG AK V R +
Sbjct: 151 VLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLX 199
Query: 240 GTHGYCAPEYATTGKLTAKSDIFSFGVVLLELITGRP 276
GT Y APE + D ++ GV++ E+ G P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 107/246 (43%), Gaps = 25/246 (10%)
Query: 41 ARRNTLDDTLSAHENKNKENTF----TYRQLVAATDNFKDTNFLGQGGFGAVYKGKLAET 96
A++ + +++ K KE+ T Q A D F LG G FG V K E+
Sbjct: 27 AKKGSEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKES 86
Query: 97 GQVVAVKQLDDTGFQGEKEF---LVEVLMLSLMRHPNLVHLIGYCAEGTQRLLVYEYMPL 153
G A+K LD K+ L E +L + P LV L + + +V EY+
Sbjct: 87 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG 146
Query: 154 GSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGF 213
G + HL + +P + R AA EYLH+ +IYRDLK N+L+ +
Sbjct: 147 GEMFSHLRRIGRFXEP---HARF-YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQG 199
Query: 214 HPKLSDFGLAKFGPTGDKSHVSTR---VMGTHGYCAPEYATTGKLTAKSDIFSFGVVLLE 270
+ +++DFG AK V R + GT Y APE + D ++ GV++ E
Sbjct: 200 YIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 251
Query: 271 LITGRP 276
+ G P
Sbjct: 252 MAAGYP 257
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 95/217 (43%), Gaps = 21/217 (9%)
Query: 66 QLVAATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEF---LVEVLM 122
Q A D F LG G FG V K E+G A+K LD K+ L E +
Sbjct: 35 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 123 LSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGA 182
L + P LV L + + +V EY+ G + HL + +P + R AA
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-YAAQI 150
Query: 183 ARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTR---VM 239
EYLH+ +IYRDLK N+L+ + + +++DFG AK V R +
Sbjct: 151 VLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLA 199
Query: 240 GTHGYCAPEYATTGKLTAKSDIFSFGVVLLELITGRP 276
GT Y APE + D ++ GV++ E+ G P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 97/214 (45%), Gaps = 7/214 (3%)
Query: 66 QLVAATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQG-EKEFLVEVLMLS 124
Q+ + + +++G+G +G V VA+K++ Q + L E+ +L
Sbjct: 21 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILL 80
Query: 125 LMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAAR 184
RH N++ + T + Y+ +E L L + + L + R
Sbjct: 81 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL-KTQHLSNDHICYFLYQILR 139
Query: 185 GLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFG-PTGDKSHVSTRVMGTHG 243
GL+Y+H+ V++RDLK N+LL K+ DFGLA+ P D + T + T
Sbjct: 140 GLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
Query: 244 YCAPEYATTGKLTAKS-DIFSFGVVLLELITGRP 276
Y APE K KS DI+S G +L E+++ RP
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 230
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 95/217 (43%), Gaps = 21/217 (9%)
Query: 66 QLVAATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEF---LVEVLM 122
Q A D F LG G FG V K E+G A+K LD K+ L E +
Sbjct: 35 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 123 LSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGA 182
L + P LV L + + +V EY+ G + HL + +P + R AA
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-YAAQI 150
Query: 183 ARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTR---VM 239
EYLH+ +IYRDLK N+L+ + + +++DFG AK V R +
Sbjct: 151 VLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLC 199
Query: 240 GTHGYCAPEYATTGKLTAKSDIFSFGVVLLELITGRP 276
GT Y APE + D ++ GV++ E+ G P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 95/217 (43%), Gaps = 21/217 (9%)
Query: 66 QLVAATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEF---LVEVLM 122
Q A D F LG G FG V K E+G A+K LD K+ L E +
Sbjct: 35 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 123 LSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGA 182
L + P LV L + + +V EY+ G + HL + +P + R AA
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-YAAQI 150
Query: 183 ARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTR---VM 239
EYLH+ +IYRDLK N+L+ + + +++DFG AK V R +
Sbjct: 151 VLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLC 199
Query: 240 GTHGYCAPEYATTGKLTAKSDIFSFGVVLLELITGRP 276
GT Y APE + D ++ GV++ E+ G P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 95/206 (46%), Gaps = 7/206 (3%)
Query: 74 FKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGE-KEFLVEVLMLSLMRHPNLV 132
+ + +++G+G +G V VA+K++ Q + L E+ +L RH N++
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 133 HLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNK 192
+ T + Y+ +E L L + + L + RGL+Y+H+
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLL-KTQHLSNDHICYFLYQILRGLKYIHSA 143
Query: 193 ADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFG-PTGDKSHVSTRVMGTHGYCAPEYAT 251
V++RDLK N+LL K+ DFGLA+ P D + T + T Y APE
Sbjct: 144 N---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 200
Query: 252 TGKLTAKS-DIFSFGVVLLELITGRP 276
K KS DI+S G +L E+++ RP
Sbjct: 201 NSKGYTKSIDIWSVGCILAEMLSNRP 226
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 95/217 (43%), Gaps = 21/217 (9%)
Query: 66 QLVAATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEF---LVEVLM 122
Q A D F LG G FG V K E+G A+K LD K+ L E +
Sbjct: 35 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 123 LSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGA 182
L + P LV L + + +V EY+ G + HL + +P + R AA
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-YAAQI 150
Query: 183 ARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTR---VM 239
EYLH+ +IYRDLK N+L+ + + +++DFG AK V R +
Sbjct: 151 VLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLC 199
Query: 240 GTHGYCAPEYATTGKLTAKSDIFSFGVVLLELITGRP 276
GT Y APE + D ++ GV++ E+ G P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 97/214 (45%), Gaps = 7/214 (3%)
Query: 66 QLVAATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGE-KEFLVEVLMLS 124
Q+ + + +++G+G +G V VA+K++ Q + L E+ +L
Sbjct: 19 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILL 78
Query: 125 LMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAAR 184
RH N++ + T + Y+ +E L L + + L + R
Sbjct: 79 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL-KTQHLSNDHICYFLYQILR 137
Query: 185 GLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFG-PTGDKSHVSTRVMGTHG 243
GL+Y+H+ V++RDLK N+LL K+ DFGLA+ P D + T + T
Sbjct: 138 GLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 194
Query: 244 YCAPEYATTGKLTAKS-DIFSFGVVLLELITGRP 276
Y APE K KS DI+S G +L E+++ RP
Sbjct: 195 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 228
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 95/206 (46%), Gaps = 7/206 (3%)
Query: 74 FKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGE-KEFLVEVLMLSLMRHPNLV 132
+ + +++G+G +G V VA+K++ Q + L E+ +L RH N++
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 133 HLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNK 192
+ T + Y+ +E L L + + L + RGL+Y+H+
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLL-KTQHLSNDHICYFLYQILRGLKYIHSA 143
Query: 193 ADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFG-PTGDKSHVSTRVMGTHGYCAPEYAT 251
V++RDLK N+LL K+ DFGLA+ P D + T + T Y APE
Sbjct: 144 N---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 200
Query: 252 TGKLTAKS-DIFSFGVVLLELITGRP 276
K KS DI+S G +L E+++ RP
Sbjct: 201 NSKGYTKSIDIWSVGCILAEMLSNRP 226
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 95/217 (43%), Gaps = 21/217 (9%)
Query: 66 QLVAATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEF---LVEVLM 122
Q A D F LG G FG V K E+G A+K LD K+ L E +
Sbjct: 36 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI 95
Query: 123 LSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGA 182
L + P LV L + + +V EY+ G + HL + +P + R AA
Sbjct: 96 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-YAAQI 151
Query: 183 ARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTR---VM 239
EYLH+ +IYRDLK N+L+ + + +++DFG AK V R +
Sbjct: 152 VLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLC 200
Query: 240 GTHGYCAPEYATTGKLTAKSDIFSFGVVLLELITGRP 276
GT Y APE + D ++ GV++ E+ G P
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 237
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 106/243 (43%), Gaps = 19/243 (7%)
Query: 41 ARRNTLDDTLSAHENKNKENTF----TYRQLVAATDNFKDTNFLGQGGFGAVYKGKLAET 96
A++ + +++ K KE+ T Q A D F LG G FG V K E+
Sbjct: 27 AKKGSEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKES 86
Query: 97 GQVVAVKQLDDTGFQGEKEF---LVEVLMLSLMRHPNLVHLIGYCAEGTQRLLVYEYMPL 153
G A+K LD K+ L E +L + P LV L + + +V EY+
Sbjct: 87 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG 146
Query: 154 GSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGF 213
G + HL + +P + R AA EYLH+ +IYRDLK N+L+ +
Sbjct: 147 GEMFSHLRRIGRFSEP---HARF-YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQG 199
Query: 214 HPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTGKLTAKSDIFSFGVVLLELIT 273
+ +++DFG AK + + GT Y APE + D ++ GV++ E+
Sbjct: 200 YIQVTDFGFAK-----RVKGATWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 254
Query: 274 GRP 276
G P
Sbjct: 255 GYP 257
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 95/217 (43%), Gaps = 21/217 (9%)
Query: 66 QLVAATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEF---LVEVLM 122
Q A D F LG G FG V K E+G A+K LD K+ L E +
Sbjct: 35 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 123 LSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGA 182
L + P LV L + + +V EY+ G + HL + +P + R AA
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-YAAQI 150
Query: 183 ARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTR---VM 239
EYLH+ +IYRDLK N+L+ + + +++DFG AK V R +
Sbjct: 151 VLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLC 199
Query: 240 GTHGYCAPEYATTGKLTAKSDIFSFGVVLLELITGRP 276
GT Y APE + D ++ GV++ E+ G P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 95/217 (43%), Gaps = 21/217 (9%)
Query: 66 QLVAATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEF---LVEVLM 122
Q A D F LG G FG V K E+G A+K LD K+ L E +
Sbjct: 35 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 123 LSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGA 182
L + P LV L + + +V EY+ G + HL + +P + R AA
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-YAAQI 150
Query: 183 ARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTR---VM 239
EYLH+ +IYRDLK N+L+ + + +++DFG AK V R +
Sbjct: 151 VLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLC 199
Query: 240 GTHGYCAPEYATTGKLTAKSDIFSFGVVLLELITGRP 276
GT Y APE + D ++ GV++ E+ G P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 116/264 (43%), Gaps = 15/264 (5%)
Query: 16 KPKINEDKDSPGPSRIDTVERQETPARRNTLDDTLSAHENKNKENTFTY---RQLVAATD 72
+P+ ++ P ++ E+Q + ++ +T E ++E+T+T R +
Sbjct: 331 RPQKEGERALPSIPKLANNEKQGVRSHTVSVSETDDYAEIIDEEDTYTMPSTRDYEIQRE 390
Query: 73 NFKDTNFLGQGGFGAVYKGKLAET---GQVVAVKQLDDTGFQGEKE-FLVEVLMLSLMRH 128
+ +G+G FG V++G VA+K + +E FL E L + H
Sbjct: 391 RIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDH 450
Query: 129 PNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEY 188
P++V LIG E V+ M L +L + L LD + + A + L Y
Sbjct: 451 PHIVKLIGVITENP----VWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAY 506
Query: 189 LHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPE 248
L +K ++RD+ A N+L+ KL DFGL+++ S + + APE
Sbjct: 507 LESKR---FVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIK-WMAPE 562
Query: 249 YATTGKLTAKSDIFSFGVVLLELI 272
+ T+ SD++ FGV + E++
Sbjct: 563 SINFRRFTSASDVWMFGVCMWEIL 586
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 97/214 (45%), Gaps = 7/214 (3%)
Query: 66 QLVAATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGE-KEFLVEVLMLS 124
Q+ + + +++G+G +G V VA+K++ Q + L E+ +L
Sbjct: 21 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILL 80
Query: 125 LMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAAR 184
RH N++ + T + Y+ +E L L + + L + R
Sbjct: 81 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL-KCQHLSNDHICYFLYQILR 139
Query: 185 GLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFG-PTGDKSHVSTRVMGTHG 243
GL+Y+H+ V++RDLK N+LL K+ DFGLA+ P D + T + T
Sbjct: 140 GLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
Query: 244 YCAPEYATTGKLTAKS-DIFSFGVVLLELITGRP 276
Y APE K KS DI+S G +L E+++ RP
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 230
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 93/212 (43%), Gaps = 17/212 (8%)
Query: 71 TDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQ---GEKEFLVEVLMLSLMR 127
+D +K LG+G FG V K TGQ AVK + + ++ L EV +L +
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 84
Query: 128 HPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLE 187
HPN+ L + + LV E G L D ++ K +I G+
Sbjct: 85 HPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIIS----RKRFSEVDAARIIRQVLSGIT 140
Query: 188 YLHNKADPPVIYRDLKAGNILL---GKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGY 244
Y H +++RDLK N+LL K + ++ DFGL+ K +GT Y
Sbjct: 141 YXHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDK---IGTAYY 194
Query: 245 CAPEYATTGKLTAKSDIFSFGVVLLELITGRP 276
APE G K D++S GV+L L++G P
Sbjct: 195 IAPE-VLHGTYDEKCDVWSTGVILYILLSGCP 225
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 95/206 (46%), Gaps = 7/206 (3%)
Query: 74 FKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGE-KEFLVEVLMLSLMRHPNLV 132
+ + +++G+G +G V VA+K++ Q + L E+ +L RH N++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 133 HLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNK 192
+ T + Y+ +E L L + + L + RGL+Y+H+
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLL-KTQHLSNDHICYFLYQILRGLKYIHSA 147
Query: 193 ADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFG-PTGDKSHVSTRVMGTHGYCAPEYAT 251
V++RDLK N+LL K+ DFGLA+ P D + T + T Y APE
Sbjct: 148 N---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 204
Query: 252 TGKLTAKS-DIFSFGVVLLELITGRP 276
K KS DI+S G +L E+++ RP
Sbjct: 205 NSKGYTKSIDIWSVGCILAEMLSNRP 230
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 95/206 (46%), Gaps = 7/206 (3%)
Query: 74 FKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGE-KEFLVEVLMLSLMRHPNLV 132
+ + +++G+G +G V VA+K++ Q + L E+ +L RH N++
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 133 HLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNK 192
+ T + Y+ +E L L + + L + RGL+Y+H+
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLL-KTQHLSNDHICYFLYQILRGLKYIHSA 143
Query: 193 ADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFG-PTGDKSHVSTRVMGTHGYCAPEYAT 251
V++RDLK N+LL K+ DFGLA+ P D + T + T Y APE
Sbjct: 144 N---VLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 200
Query: 252 TGKLTAKS-DIFSFGVVLLELITGRP 276
K KS DI+S G +L E+++ RP
Sbjct: 201 NSKGYTKSIDIWSVGCILAEMLSNRP 226
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 97/214 (45%), Gaps = 7/214 (3%)
Query: 66 QLVAATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGE-KEFLVEVLMLS 124
Q+ + + +++G+G +G V VA+K++ Q + L E+ +L
Sbjct: 15 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILL 74
Query: 125 LMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAAR 184
RH N++ + T + Y+ +E L L + + L + R
Sbjct: 75 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL-KTQHLSNDHICYFLYQILR 133
Query: 185 GLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFG-PTGDKSHVSTRVMGTHG 243
GL+Y+H+ V++RDLK N+LL K+ DFGLA+ P D + T + T
Sbjct: 134 GLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 190
Query: 244 YCAPEYATTGKLTAKS-DIFSFGVVLLELITGRP 276
Y APE K KS DI+S G +L E+++ RP
Sbjct: 191 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 224
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 95/206 (46%), Gaps = 7/206 (3%)
Query: 74 FKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGE-KEFLVEVLMLSLMRHPNLV 132
+ + +++G+G +G V VA+K++ Q + L E+ +L RH N++
Sbjct: 33 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 92
Query: 133 HLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNK 192
+ T + Y+ +E L L + + L + RGL+Y+H+
Sbjct: 93 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLL-KTQHLSNDHICYFLYQILRGLKYIHSA 151
Query: 193 ADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFG-PTGDKSHVSTRVMGTHGYCAPEYAT 251
V++RDLK N+LL K+ DFGLA+ P D + T + T Y APE
Sbjct: 152 N---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 208
Query: 252 TGKLTAKS-DIFSFGVVLLELITGRP 276
K KS DI+S G +L E+++ RP
Sbjct: 209 NSKGYTKSIDIWSVGCILAEMLSNRP 234
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 95/206 (46%), Gaps = 7/206 (3%)
Query: 74 FKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGE-KEFLVEVLMLSLMRHPNLV 132
+ + +++G+G +G V VA+K++ Q + L E+ +L RH N++
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 133 HLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNK 192
+ T + Y+ +E L L + + L + RGL+Y+H+
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLL-KTQHLSNDHICYFLYQILRGLKYIHSA 143
Query: 193 ADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFG-PTGDKSHVSTRVMGTHGYCAPEYAT 251
V++RDLK N+LL K+ DFGLA+ P D + T + T Y APE
Sbjct: 144 N---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 200
Query: 252 TGKLTAKS-DIFSFGVVLLELITGRP 276
K KS DI+S G +L E+++ RP
Sbjct: 201 NSKGYTKSIDIWSVGCILAEMLSNRP 226
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 95/217 (43%), Gaps = 21/217 (9%)
Query: 66 QLVAATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEF---LVEVLM 122
Q A D F LG G FG V K E+G A+K LD K+ L E +
Sbjct: 22 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI 81
Query: 123 LSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGA 182
L + P LV L + + +V EY+ G + HL + +P + R AA
Sbjct: 82 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-YAAQI 137
Query: 183 ARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTR---VM 239
EYLH+ +IYRDLK N+L+ + + +++DFG AK V R +
Sbjct: 138 VLTFEYLHS---LDLIYRDLKPENLLIDEQGYIQVTDFGFAK--------RVKGRTWXLC 186
Query: 240 GTHGYCAPEYATTGKLTAKSDIFSFGVVLLELITGRP 276
GT Y APE + D ++ GV++ E+ G P
Sbjct: 187 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 223
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 102/229 (44%), Gaps = 34/229 (14%)
Query: 64 YRQLVAATD-----NFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGE---KE 115
YRQ V T ++D +G G +GAV TG VA+K+L FQ E K
Sbjct: 12 YRQEVTKTAWEVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLY-RPFQSELFAKR 70
Query: 116 FLVEVLMLSLMRHPNLVHLIGYCA------EGTQRLLVYEYM--PLGSLEDHLLGLTPEM 167
E+ +L MRH N++ L+ + T LV +M LG L H
Sbjct: 71 AYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKH-------- 122
Query: 168 KPLDWNTRMKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGP 227
+ L + + +GL Y+H +I+RDLK GN+ + + K+ DFGLA+
Sbjct: 123 EKLGEDRIQFLVYQMLKGLRYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLARQAD 179
Query: 228 TGDKSHVSTRVMGTHGYCAPEYATTG-KLTAKSDIFSFGVVLLELITGR 275
+ V TR Y APE + T DI+S G ++ E+ITG+
Sbjct: 180 SEMXGXVVTR-----WYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 97/214 (45%), Gaps = 7/214 (3%)
Query: 66 QLVAATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGE-KEFLVEVLMLS 124
Q+ + + +++G+G +G V VA+K++ Q + L E+ +L
Sbjct: 22 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILL 81
Query: 125 LMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAAR 184
RH N++ + T + Y+ +E L L + + L + R
Sbjct: 82 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL-KTQHLSNDHICYFLYQILR 140
Query: 185 GLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFG-PTGDKSHVSTRVMGTHG 243
GL+Y+H+ V++RDLK N+LL K+ DFGLA+ P D + T + T
Sbjct: 141 GLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 197
Query: 244 YCAPEYATTGKLTAKS-DIFSFGVVLLELITGRP 276
Y APE K KS DI+S G +L E+++ RP
Sbjct: 198 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 231
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 97/214 (45%), Gaps = 7/214 (3%)
Query: 66 QLVAATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGE-KEFLVEVLMLS 124
Q+ + + +++G+G +G V VA+K++ Q + L E+ +L
Sbjct: 23 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILL 82
Query: 125 LMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAAR 184
RH N++ + T + Y+ +E L L + + L + R
Sbjct: 83 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL-KTQHLSNDHICYFLYQILR 141
Query: 185 GLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFG-PTGDKSHVSTRVMGTHG 243
GL+Y+H+ V++RDLK N+LL K+ DFGLA+ P D + T + T
Sbjct: 142 GLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 198
Query: 244 YCAPEYATTGKLTAKS-DIFSFGVVLLELITGRP 276
Y APE K KS DI+S G +L E+++ RP
Sbjct: 199 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 232
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 97/214 (45%), Gaps = 7/214 (3%)
Query: 66 QLVAATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGE-KEFLVEVLMLS 124
Q+ + + +++G+G +G V VA+K++ Q + L E+ +L
Sbjct: 14 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILL 73
Query: 125 LMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAAR 184
RH N++ + T + Y+ +E L L + + L + R
Sbjct: 74 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL-KTQHLSNDHICYFLYQILR 132
Query: 185 GLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFG-PTGDKSHVSTRVMGTHG 243
GL+Y+H+ V++RDLK N+LL K+ DFGLA+ P D + T + T
Sbjct: 133 GLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 189
Query: 244 YCAPEYATTGKLTAKS-DIFSFGVVLLELITGRP 276
Y APE K KS DI+S G +L E+++ RP
Sbjct: 190 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 223
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 97/214 (45%), Gaps = 7/214 (3%)
Query: 66 QLVAATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGE-KEFLVEVLMLS 124
Q+ + + +++G+G +G V VA+K++ Q + L E+ +L
Sbjct: 21 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILL 80
Query: 125 LMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAAR 184
RH N++ + T + Y+ +E L L + + L + R
Sbjct: 81 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL-KTQHLSNDHICYFLYQILR 139
Query: 185 GLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFG-PTGDKSHVSTRVMGTHG 243
GL+Y+H+ V++RDLK N+LL K+ DFGLA+ P D + T + T
Sbjct: 140 GLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
Query: 244 YCAPEYATTGKLTAKS-DIFSFGVVLLELITGRP 276
Y APE K KS DI+S G +L E+++ RP
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 230
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 104/234 (44%), Gaps = 21/234 (8%)
Query: 64 YRQLVAATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQG-EKEFLVEVLM 122
++Q D + + LG G F V + T ++VA+K + +G E E+ +
Sbjct: 10 WKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAV 69
Query: 123 LSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLL--GLTPEMKPLDWNTRMKIAA 180
L ++HPN+V L G L+ + + G L D ++ G E ++
Sbjct: 70 LHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTE------RDASRLIF 123
Query: 181 GAARGLEYLHNKADPPVIYRDLKAGNIL---LGKGFHPKLSDFGLAKFGPTGDKSHVSTR 237
++YLH D +++RDLK N+L L + +SDFGL+K G V +
Sbjct: 124 QVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS---VLST 177
Query: 238 VMGTHGYCAPEYATTGKLTAKSDIFSFGVVLLELITGRPAM---DDSQGHERML 288
GT GY APE + D +S GV+ L+ G P +D++ E++L
Sbjct: 178 ACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQIL 231
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 97/214 (45%), Gaps = 7/214 (3%)
Query: 66 QLVAATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGE-KEFLVEVLMLS 124
Q+ + + +++G+G +G V VA+K++ Q + L E+ +L
Sbjct: 15 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILL 74
Query: 125 LMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAAR 184
RH N++ + T + Y+ +E L L + + L + R
Sbjct: 75 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL-KTQHLSNDHICYFLYQILR 133
Query: 185 GLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFG-PTGDKSHVSTRVMGTHG 243
GL+Y+H+ V++RDLK N+LL K+ DFGLA+ P D + T + T
Sbjct: 134 GLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 190
Query: 244 YCAPEYATTGKLTAKS-DIFSFGVVLLELITGRP 276
Y APE K KS DI+S G +L E+++ RP
Sbjct: 191 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 224
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 95/206 (46%), Gaps = 7/206 (3%)
Query: 74 FKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGE-KEFLVEVLMLSLMRHPNLV 132
+ + +++G+G +G V VA+K++ Q + L E+ +L RH N++
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENII 86
Query: 133 HLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNK 192
+ T + Y+ +E L L + + L + RGL+Y+H+
Sbjct: 87 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLL-KTQHLSNDHICYFLYQILRGLKYIHSA 145
Query: 193 ADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFG-PTGDKSHVSTRVMGTHGYCAPEYAT 251
V++RDLK N+LL K+ DFGLA+ P D + T + T Y APE
Sbjct: 146 N---VLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 202
Query: 252 TGKLTAKS-DIFSFGVVLLELITGRP 276
K KS DI+S G +L E+++ RP
Sbjct: 203 NSKGYTKSIDIWSVGCILAEMLSNRP 228
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 100/219 (45%), Gaps = 23/219 (10%)
Query: 70 ATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVE-VLMLSLMR- 127
AT ++ +G G +G VYK + +G VA+K + GE+ + V ++L+R
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPN--GEEGLPISTVREVALLRR 59
Query: 128 -----HPNLVHLIGYCAEG-TQR----LLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMK 177
HPN+V L+ CA T R LV+E++ L +L P P + T
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAE--TIKD 116
Query: 178 IAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTR 237
+ RGL++LH +++RDLK NIL+ G KL+DFGLA+
Sbjct: 117 LMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARI---YSYQMALFP 170
Query: 238 VMGTHGYCAPEYATTGKLTAKSDIFSFGVVLLELITGRP 276
V+ T Y APE D++S G + E+ +P
Sbjct: 171 VVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKP 209
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 104/234 (44%), Gaps = 21/234 (8%)
Query: 64 YRQLVAATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQG-EKEFLVEVLM 122
++Q D + + LG G F V + T ++VA+K + +G E E+ +
Sbjct: 10 WKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAV 69
Query: 123 LSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLL--GLTPEMKPLDWNTRMKIAA 180
L ++HPN+V L G L+ + + G L D ++ G E ++
Sbjct: 70 LHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTE------RDASRLIF 123
Query: 181 GAARGLEYLHNKADPPVIYRDLKAGNIL---LGKGFHPKLSDFGLAKFGPTGDKSHVSTR 237
++YLH D +++RDLK N+L L + +SDFGL+K G V +
Sbjct: 124 QVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS---VLST 177
Query: 238 VMGTHGYCAPEYATTGKLTAKSDIFSFGVVLLELITGRPAM---DDSQGHERML 288
GT GY APE + D +S GV+ L+ G P +D++ E++L
Sbjct: 178 ACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQIL 231
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 95/217 (43%), Gaps = 21/217 (9%)
Query: 66 QLVAATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEF---LVEVLM 122
Q A D F LG G FG V K E+G A+K LD K+ L E +
Sbjct: 35 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 123 LSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGA 182
L + P LV L + + +V EY+ G + HL + +P + R AA
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-YAAQI 150
Query: 183 ARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTR---VM 239
EYLH+ +IYRDLK N+++ + + +++DFG AK V R +
Sbjct: 151 VLTFEYLHS---LDLIYRDLKPENLIIDQQGYIQVTDFGFAK--------RVKGRTWXLC 199
Query: 240 GTHGYCAPEYATTGKLTAKSDIFSFGVVLLELITGRP 276
GT Y APE + D ++ GV++ E+ G P
Sbjct: 200 GTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 97/214 (45%), Gaps = 7/214 (3%)
Query: 66 QLVAATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGE-KEFLVEVLMLS 124
Q+ + + +++G+G +G V VA+K++ Q + L E+ +L
Sbjct: 37 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILL 96
Query: 125 LMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAAR 184
RH N++ + T + Y+ +E L L + + L + R
Sbjct: 97 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL-KTQHLSNDHICYFLYQILR 155
Query: 185 GLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFG-PTGDKSHVSTRVMGTHG 243
GL+Y+H+ V++RDLK N+LL K+ DFGLA+ P D + T + T
Sbjct: 156 GLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 212
Query: 244 YCAPEYATTGKLTAKS-DIFSFGVVLLELITGRP 276
Y APE K KS DI+S G +L E+++ RP
Sbjct: 213 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 246
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 101/214 (47%), Gaps = 23/214 (10%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGF-QGEKE-FLVEVLMLSLMRHPNLVHLIGY 137
+G+G F VYKG ET VA +L D + E++ F E L ++HPN+V
Sbjct: 34 IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYD- 92
Query: 138 CAEGTQR-----LLVYEYMPLGSLEDHLLGL-TPEMKPL-DWNTRMKIAAGAARGLEYLH 190
E T + +LV E G+L+ +L ++K L W ++ +GL++LH
Sbjct: 93 SWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQI------LKGLQFLH 146
Query: 191 NKADPPVIYRDLKAGNILL-GKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEY 249
+ PP+I+RDLK NI + G K+ D GLA T ++ + V+GT + APE
Sbjct: 147 TRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLA----TLKRASFAKAVIGTPEFXAPE- 200
Query: 250 ATTGKLTAKSDIFSFGVVLLELITGRPAMDDSQG 283
K D+++FG LE T + Q
Sbjct: 201 XYEEKYDESVDVYAFGXCXLEXATSEYPYSECQN 234
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 98/215 (45%), Gaps = 24/215 (11%)
Query: 80 LGQGGFGAVYKGKL-----AETGQVVAVKQLDDTGFQGEKEFLV-EVLMLSLM-RHPNLV 132
LG G FG V + ++ VAVK L + E+E L+ E+ +LS + H N+V
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 113
Query: 133 HLIGYCAEGTQRLLVYEYMPLGSLEDHLLG-----LTPEMKP---------LDWNTRMKI 178
+L+G C G L++ EY G L + L + + P LD +
Sbjct: 114 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 173
Query: 179 AAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRV 238
+ A+G+ +L +K I+RDL A NILL G K+ DFGLA+ V
Sbjct: 174 SYQVAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNA 230
Query: 239 MGTHGYCAPEYATTGKLTAKSDIFSFGVVLLELIT 273
+ APE T +SD++S+G+ L EL +
Sbjct: 231 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 104/234 (44%), Gaps = 21/234 (8%)
Query: 64 YRQLVAATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQG-EKEFLVEVLM 122
++Q D + + LG G F V + T ++VA+K + +G E E+ +
Sbjct: 10 WKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAV 69
Query: 123 LSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLL--GLTPEMKPLDWNTRMKIAA 180
L ++HPN+V L G L+ + + G L D ++ G E ++
Sbjct: 70 LHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTE------RDASRLIF 123
Query: 181 GAARGLEYLHNKADPPVIYRDLKAGNIL---LGKGFHPKLSDFGLAKFGPTGDKSHVSTR 237
++YLH D +++RDLK N+L L + +SDFGL+K G V +
Sbjct: 124 QVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS---VLST 177
Query: 238 VMGTHGYCAPEYATTGKLTAKSDIFSFGVVLLELITGRPAM---DDSQGHERML 288
GT GY APE + D +S GV+ L+ G P +D++ E++L
Sbjct: 178 ACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQIL 231
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 92/206 (44%), Gaps = 7/206 (3%)
Query: 74 FKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGE-KEFLVEVLMLSLMRHPNLV 132
+ ++G+G +G V VA+K++ Q + L E+ +L RH N++
Sbjct: 45 YTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVI 104
Query: 133 HLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNK 192
+ T + Y+ +E L L + L + RGL+Y+H+
Sbjct: 105 GIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQ-LSNDHICYFLYQILRGLKYIHSA 163
Query: 193 ADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFG-PTGDKSHVSTRVMGTHGYCAPEYAT 251
V++RDLK N+L+ K+ DFGLA+ P D + T + T Y APE
Sbjct: 164 N---VLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIML 220
Query: 252 TGKLTAKS-DIFSFGVVLLELITGRP 276
K KS DI+S G +L E+++ RP
Sbjct: 221 NSKGYTKSIDIWSVGCILAEMLSNRP 246
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 119/270 (44%), Gaps = 17/270 (6%)
Query: 11 RKKKTKPKINEDKDSPGPSRIDTVERQETPARRNTLDDTLSAHENKNKENTFTYRQLVAA 70
+KK T ++N D + + E ++ L+ L + K E T +Q V
Sbjct: 5 KKKPTPIQLNPAPDGSAVNGTSSAETNLEALQKKLLELELDEQQRKRLEAFLTQKQKVGE 64
Query: 71 T--DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLD-DTGFQGEKEFLVEVLMLSLMR 127
D+F+ + LG G G V+K +G V+A K + + + + E+ +L
Sbjct: 65 LKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECN 124
Query: 128 HPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHL--LGLTPEMKPLDWNTRMKIAAGAARG 185
P +V G + + E+M GSL+ L G PE K++ +G
Sbjct: 125 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE------QILGKVSIAVIKG 178
Query: 186 LEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYC 245
L YL K +++RD+K NIL+ KL DFG++ G D ++ +GT Y
Sbjct: 179 LTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MANSFVGTRSYM 232
Query: 246 APEYATTGKLTAKSDIFSFGVVLLELITGR 275
+PE + +SDI+S G+ L+E+ GR
Sbjct: 233 SPERLQGTHYSVQSDIWSMGLSLVEMAVGR 262
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 104/234 (44%), Gaps = 21/234 (8%)
Query: 64 YRQLVAATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQG-EKEFLVEVLM 122
++Q D + + LG G F V + T ++VA+K + +G E E+ +
Sbjct: 10 WKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAV 69
Query: 123 LSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLL--GLTPEMKPLDWNTRMKIAA 180
L ++HPN+V L G L+ + + G L D ++ G E ++
Sbjct: 70 LHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTE------RDASRLIF 123
Query: 181 GAARGLEYLHNKADPPVIYRDLKAGNIL---LGKGFHPKLSDFGLAKFGPTGDKSHVSTR 237
++YLH D +++RDLK N+L L + +SDFGL+K G V +
Sbjct: 124 QVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS---VLST 177
Query: 238 VMGTHGYCAPEYATTGKLTAKSDIFSFGVVLLELITGRPAM---DDSQGHERML 288
GT GY APE + D +S GV+ L+ G P +D++ E++L
Sbjct: 178 ACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQIL 231
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 104/231 (45%), Gaps = 17/231 (7%)
Query: 50 LSAHENKNKENTFTYRQLVAAT--DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLD- 106
L + K E T +Q V D+F+ + LG G G V+K +G V+A K +
Sbjct: 9 LDEQQRKRLEAFLTQKQKVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHL 68
Query: 107 DTGFQGEKEFLVEVLMLSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHL--LGLT 164
+ + + E+ +L P +V G + + E+M GSL+ L G
Sbjct: 69 EIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRI 128
Query: 165 PEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAK 224
PE K++ +GL YL K +++RD+K NIL+ KL DFG++
Sbjct: 129 PE------QILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS- 179
Query: 225 FGPTGDKSHVSTRVMGTHGYCAPEYATTGKLTAKSDIFSFGVVLLELITGR 275
G D ++ +GT Y +PE + +SDI+S G+ L+E+ GR
Sbjct: 180 -GQLIDS--MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 227
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 96/205 (46%), Gaps = 11/205 (5%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLD-DTGFQGEKEFLVEVLMLSLMRHPN 130
D+F+ + LG G G V K + +G ++A K + + + + E+ +L P
Sbjct: 16 DDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 75
Query: 131 LVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLH 190
+V G + + E+M GSL+ L E K + K++ RGL YL
Sbjct: 76 IVGFYGAFYSDGEISICMEHMDGGSLDQVL----KEAKRIPEEILGKVSIAVLRGLAYLR 131
Query: 191 NKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYA 250
K +++RD+K NIL+ KL DFG++ G D ++ +GT Y APE
Sbjct: 132 EKHQ--IMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MANSFVGTRSYMAPERL 185
Query: 251 TTGKLTAKSDIFSFGVVLLELITGR 275
+ +SDI+S G+ L+EL GR
Sbjct: 186 QGTHYSVQSDIWSMGLSLVELAVGR 210
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 98/215 (45%), Gaps = 24/215 (11%)
Query: 80 LGQGGFGAVYKGKL-----AETGQVVAVKQLDDTGFQGEKEFLV-EVLMLSLM-RHPNLV 132
LG G FG V + ++ VAVK L + E+E L+ E+ +LS + H N+V
Sbjct: 47 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 106
Query: 133 HLIGYCAEGTQRLLVYEYMPLGSLEDHLLG-----LTPEMKP---------LDWNTRMKI 178
+L+G C G L++ EY G L + L + + P LD +
Sbjct: 107 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 166
Query: 179 AAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRV 238
+ A+G+ +L +K I+RDL A NILL G K+ DFGLA+ V
Sbjct: 167 SYQVAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 223
Query: 239 MGTHGYCAPEYATTGKLTAKSDIFSFGVVLLELIT 273
+ APE T +SD++S+G+ L EL +
Sbjct: 224 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 258
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 102/211 (48%), Gaps = 29/211 (13%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLS--LMRHPNLVHLIGY 137
+G+G +G V++G + G+ VAVK + EK + E + + ++RH N++ I
Sbjct: 16 VGKGRYGEVWRG--SWQGENVAVKIFSS---RDEKSWFRETELYNTVMLRHENILGFIAS 70
Query: 138 CA----EGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLH--- 190
TQ L+ Y +GSL D+L ++ LD + ++I A GL +LH
Sbjct: 71 DMTSRHSSTQLWLITHYHEMGSLYDYL-----QLTTLDTVSCLRIVLSIASGLAHLHIEI 125
Query: 191 --NKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKF--GPTGDKSHVSTRVMGTHGYCA 246
+ P + +RDLK+ NIL+ K ++D GLA T + +GT Y A
Sbjct: 126 FGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMA 185
Query: 247 PEYA-TTGKLTA-----KSDIFSFGVVLLEL 271
PE T ++ + DI++FG+VL E+
Sbjct: 186 PEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 98/220 (44%), Gaps = 21/220 (9%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKL-----AETGQVVAVKQLDDTGFQGEKEFLVEVL--MLS 124
D K LG+G FG V + T + VAVK L + E L+ L ++
Sbjct: 29 DRLKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIH 88
Query: 125 LMRHPNLVHLIGYCAE-GTQRLLVYEYMPLGSLEDHLLGLTPEMKP----------LDWN 173
+ H N+V+L+G C + G +++ E+ G+L +L E P L
Sbjct: 89 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLE 148
Query: 174 TRMKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSH 233
+ + A+G+E+L ++ I+RDL A NILL + K+ DFGLA+
Sbjct: 149 HLIXYSFQVAKGMEFLASRK---XIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXV 205
Query: 234 VSTRVMGTHGYCAPEYATTGKLTAKSDIFSFGVVLLELIT 273
+ APE T +SD++SFGV+L E+ +
Sbjct: 206 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 97/214 (45%), Gaps = 7/214 (3%)
Query: 66 QLVAATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGE-KEFLVEVLMLS 124
Q+ + + +++G+G +G V VA++++ Q + L E+ +L
Sbjct: 21 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILL 80
Query: 125 LMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAAR 184
RH N++ + T + Y+ +E L L + + L + R
Sbjct: 81 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL-KTQHLSNDHICYFLYQILR 139
Query: 185 GLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFG-PTGDKSHVSTRVMGTHG 243
GL+Y+H+ V++RDLK N+LL K+ DFGLA+ P D + T + T
Sbjct: 140 GLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
Query: 244 YCAPEYATTGKLTAKS-DIFSFGVVLLELITGRP 276
Y APE K KS DI+S G +L E+++ RP
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 230
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 98/215 (45%), Gaps = 24/215 (11%)
Query: 80 LGQGGFGAVYKGKL-----AETGQVVAVKQLDDTGFQGEKEFLV-EVLMLSLM-RHPNLV 132
LG G FG V + ++ VAVK L + E+E L+ E+ +LS + H N+V
Sbjct: 49 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 108
Query: 133 HLIGYCAEGTQRLLVYEYMPLGSLEDHLLG-----LTPEMKP---------LDWNTRMKI 178
+L+G C G L++ EY G L + L + + P LD +
Sbjct: 109 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 168
Query: 179 AAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRV 238
+ A+G+ +L +K I+RDL A NILL G K+ DFGLA+ V
Sbjct: 169 SYQVAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 225
Query: 239 MGTHGYCAPEYATTGKLTAKSDIFSFGVVLLELIT 273
+ APE T +SD++S+G+ L EL +
Sbjct: 226 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 260
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 102/211 (48%), Gaps = 29/211 (13%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLS--LMRHPNLVHLIGY 137
+G+G +G V++G + G+ VAVK + EK + E + + ++RH N++ I
Sbjct: 16 VGKGRYGEVWRG--SWQGENVAVKIFSS---RDEKSWFRETELYNTVMLRHENILGFIAS 70
Query: 138 CA----EGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLH--- 190
TQ L+ Y +GSL D+L ++ LD + ++I A GL +LH
Sbjct: 71 DMTSRHSSTQLWLITHYHEMGSLYDYL-----QLTTLDTVSCLRIVLSIASGLAHLHIEI 125
Query: 191 --NKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKF--GPTGDKSHVSTRVMGTHGYCA 246
+ P + +RDLK+ NIL+ K ++D GLA T + +GT Y A
Sbjct: 126 FGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMA 185
Query: 247 PEYA-TTGKLTA-----KSDIFSFGVVLLEL 271
PE T ++ + DI++FG+VL E+
Sbjct: 186 PEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 115/248 (46%), Gaps = 44/248 (17%)
Query: 50 LSAHENKNKENTFTYRQLVAAT-----DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQ 104
++ H + ++E YRQ + T + +++ + +G G +G+V +TG VAVK+
Sbjct: 1 MAHHHHHSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKK 60
Query: 105 LDDTGFQG---EKEFLVEVLMLSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLED--- 158
L FQ K E+ +L M+H N++ L+ + P SLE+
Sbjct: 61 LS-RPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTPARSLEEFND 107
Query: 159 -----HLLG-----LTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIYRDLKAGNIL 208
HL+G + K D + + I RGL+Y+H+ AD +I+RDLK N+
Sbjct: 108 VYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ-ILRGLKYIHS-AD--IIHRDLKPSNLA 163
Query: 209 LGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTG-KLTAKSDIFSFGVV 267
+ + K+ DFGLA+ +V+TR Y APE DI+S G +
Sbjct: 164 VNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCI 218
Query: 268 LLELITGR 275
+ EL+TGR
Sbjct: 219 MAELLTGR 226
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 99/211 (46%), Gaps = 21/211 (9%)
Query: 80 LGQGGFGAVYKGKL-----AETGQVVAVKQLDDTGFQGEKEFLVEVL--MLSLMRHPNLV 132
LG+G FG V + T + VAVK L + E L+ L ++ + H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 133 HLIGYCAE-GTQRLLVYEYMPLGSLEDHLLGLTPEMKP--------LDWNTRMKIAAGAA 183
+L+G C + G +++ E+ G+L +L E P L + + A
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVA 154
Query: 184 RGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVST-RVMGTH 242
+G+E+L ++ I+RDL A NILL + K+ DFGLA+ D +V
Sbjct: 155 KGMEFLASRK---XIHRDLAARNILLSEKNVVKIXDFGLAR-DIYKDPDYVRKGDARLPL 210
Query: 243 GYCAPEYATTGKLTAKSDIFSFGVVLLELIT 273
+ APE T +SD++SFGV+L E+ +
Sbjct: 211 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 113/251 (45%), Gaps = 19/251 (7%)
Query: 50 LSAHENKNKENTFTYRQLVAAT--DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLD- 106
++ + K E T +Q V D+F+ + LG G G V+K +G V+A K +
Sbjct: 1 MTLQQRKRLEAFLTQKQKVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHL 60
Query: 107 DTGFQGEKEFLVEVLMLSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHL--LGLT 164
+ + + E+ +L P +V G + + E+M GSL+ L G
Sbjct: 61 EIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRI 120
Query: 165 PEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAK 224
PE K++ +GL YL K +++RD+K NIL+ KL DFG++
Sbjct: 121 PE------QILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS- 171
Query: 225 FGPTGDKSHVSTRVMGTHGYCAPEYATTGKLTAKSDIFSFGVVLLELITGRPAMDDSQGH 284
G D ++ +GT Y +PE + +SDI+S G+ L+E+ GR + G
Sbjct: 172 -GQLIDS--MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIGSGSGS 228
Query: 285 ERM--LVDWVT 293
+ L+D++
Sbjct: 229 MAIFELLDYIV 239
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 98/215 (45%), Gaps = 24/215 (11%)
Query: 80 LGQGGFGAVYKGKL-----AETGQVVAVKQLDDTGFQGEKEFLV-EVLMLSLM-RHPNLV 132
LG G FG V + ++ VAVK L + E+E L+ E+ +LS + H N+V
Sbjct: 31 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 90
Query: 133 HLIGYCAEGTQRLLVYEYMPLGSLEDHLLG-----LTPEMKP---------LDWNTRMKI 178
+L+G C G L++ EY G L + L + + P LD +
Sbjct: 91 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 150
Query: 179 AAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRV 238
+ A+G+ +L +K I+RDL A NILL G K+ DFGLA+ V
Sbjct: 151 SYQVAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 207
Query: 239 MGTHGYCAPEYATTGKLTAKSDIFSFGVVLLELIT 273
+ APE T +SD++S+G+ L EL +
Sbjct: 208 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 242
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 94/208 (45%), Gaps = 14/208 (6%)
Query: 78 NFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGF---QGEKEFLVEVLMLSLMRHPNLVHL 134
FLG+GGF Y+ +T +V A K + + +++ E+ + + +P++V
Sbjct: 48 RFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGF 107
Query: 135 IGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKAD 194
G+ + +V E SL L L K + +G++YLHN
Sbjct: 108 HGFFEDDDFVYVVLEICRRRSL----LELHKRRKAVTEPEARYFMRQTIQGVQYLHNNR- 162
Query: 195 PPVIYRDLKAGNILLGKGFHPKLSDFGLA-KFGPTGDKSHVSTRVMGTHGYCAPEYATTG 253
VI+RDLK GN+ L K+ DFGLA K G++ + GT Y APE
Sbjct: 163 --VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKT---LCGTPNYIAPEVLCKK 217
Query: 254 KLTAKSDIFSFGVVLLELITGRPAMDDS 281
+ + DI+S G +L L+ G+P + S
Sbjct: 218 GHSFEVDIWSLGCILYTLLVGKPPFETS 245
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 95/217 (43%), Gaps = 21/217 (9%)
Query: 66 QLVAATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEF---LVEVLM 122
Q A D F LG G FG V K E+G A+K LD K+ L E +
Sbjct: 35 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 123 LSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGA 182
L + P LV L + + +V EY+ G + HL + +P + R AA
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-YAAQI 150
Query: 183 ARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTR---VM 239
EYLH+ +IYRDLK N+L+ + + +++DFG AK V R +
Sbjct: 151 VLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLC 199
Query: 240 GTHGYCAPEYATTGKLTAKSDIFSFGVVLLELITGRP 276
GT Y APE + D ++ GV++ ++ G P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAGYP 236
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 98/215 (45%), Gaps = 24/215 (11%)
Query: 80 LGQGGFGAVYKGKL-----AETGQVVAVKQLDDTGFQGEKEFLV-EVLMLSLM-RHPNLV 132
LG G FG V + ++ VAVK L + E+E L+ E+ +LS + H N+V
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 113
Query: 133 HLIGYCAEGTQRLLVYEYMPLGSLEDHLLG-----LTPEMKP---------LDWNTRMKI 178
+L+G C G L++ EY G L + L + + P LD +
Sbjct: 114 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 173
Query: 179 AAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRV 238
+ A+G+ +L +K I+RDL A NILL G K+ DFGLA+ V
Sbjct: 174 SYQVAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 230
Query: 239 MGTHGYCAPEYATTGKLTAKSDIFSFGVVLLELIT 273
+ APE T +SD++S+G+ L EL +
Sbjct: 231 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 102/211 (48%), Gaps = 29/211 (13%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLS--LMRHPNLVHLIGY 137
+G+G +G V++G + G+ VAVK + EK + E + + ++RH N++ I
Sbjct: 45 VGKGRYGEVWRG--SWQGENVAVKIFSS---RDEKSWFRETELYNTVMLRHENILGFIAS 99
Query: 138 CA----EGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLH--- 190
TQ L+ Y +GSL D+L ++ LD + ++I A GL +LH
Sbjct: 100 DMTSRHSSTQLWLITHYHEMGSLYDYL-----QLTTLDTVSCLRIVLSIASGLAHLHIEI 154
Query: 191 --NKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKF--GPTGDKSHVSTRVMGTHGYCA 246
+ P + +RDLK+ NIL+ K ++D GLA T + +GT Y A
Sbjct: 155 FGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMA 214
Query: 247 PEYA-TTGKLTA-----KSDIFSFGVVLLEL 271
PE T ++ + DI++FG+VL E+
Sbjct: 215 PEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 94/208 (45%), Gaps = 14/208 (6%)
Query: 78 NFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGF---QGEKEFLVEVLMLSLMRHPNLVHL 134
FLG+GGF Y+ +T +V A K + + +++ E+ + + +P++V
Sbjct: 32 RFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGF 91
Query: 135 IGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKAD 194
G+ + +V E SL L L K + +G++YLHN
Sbjct: 92 HGFFEDDDFVYVVLEICRRRSL----LELHKRRKAVTEPEARYFMRQTIQGVQYLHNNR- 146
Query: 195 PPVIYRDLKAGNILLGKGFHPKLSDFGLA-KFGPTGDKSHVSTRVMGTHGYCAPEYATTG 253
VI+RDLK GN+ L K+ DFGLA K G++ + GT Y APE
Sbjct: 147 --VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER---KKDLCGTPNYIAPEVLCKK 201
Query: 254 KLTAKSDIFSFGVVLLELITGRPAMDDS 281
+ + DI+S G +L L+ G+P + S
Sbjct: 202 GHSFEVDIWSLGCILYTLLVGKPPFETS 229
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 99/211 (46%), Gaps = 21/211 (9%)
Query: 80 LGQGGFGAVYKGKL-----AETGQVVAVKQLDDTGFQGEKEFLVEVL--MLSLMRHPNLV 132
LG+G FG V + T + VAVK L + E L+ L ++ + H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 133 HLIGYCAE-GTQRLLVYEYMPLGSLEDHLLGLTPEMKP--------LDWNTRMKIAAGAA 183
+L+G C + G +++ E+ G+L +L E P L + + A
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVA 154
Query: 184 RGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVST-RVMGTH 242
+G+E+L ++ I+RDL A NILL + K+ DFGLA+ D +V
Sbjct: 155 KGMEFLASRK---XIHRDLAARNILLSEKNVVKICDFGLAR-DIYKDPDYVRKGDARLPL 210
Query: 243 GYCAPEYATTGKLTAKSDIFSFGVVLLELIT 273
+ APE T +SD++SFGV+L E+ +
Sbjct: 211 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 97/218 (44%), Gaps = 15/218 (6%)
Query: 66 QLVAATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGE-KEFLVEVLMLS 124
Q+ + + +++G+G +G V VA+K++ Q + L E+ +L
Sbjct: 37 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILL 96
Query: 125 LMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGL----TPEMKPLDWNTRMKIAA 180
RH N++ + R E M L HL+G + + L +
Sbjct: 97 RFRHENIIGI-----NDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLY 151
Query: 181 GAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFG-PTGDKSHVSTRVM 239
RGL+Y+H+ V++RDLK N+LL K+ DFGLA+ P D + T +
Sbjct: 152 QILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYV 208
Query: 240 GTHGYCAPEYATTGKLTAKS-DIFSFGVVLLELITGRP 276
T Y APE K KS DI+S G +L E+++ RP
Sbjct: 209 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 246
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 104/225 (46%), Gaps = 21/225 (9%)
Query: 55 NKNKENTFTYRQLVA-ATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGE 113
K K + YR+ V AT + LG+G FG V++ + +TG AVK++ F+ E
Sbjct: 79 EKLKPVDYEYREEVHWATHQLR----LGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAE 134
Query: 114 KEFLVEVLMLSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWN 173
E++ + + P +V L G EG + E + GSL L E L +
Sbjct: 135 -----ELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQ----LVKEQGCLPED 185
Query: 174 TRMKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGK-GFHPKLSDFGLAK-FGPTGDK 231
+ A GLEYLH++ +++ D+KA N+LL G H L DFG A P G
Sbjct: 186 RALYYLGQALEGLEYLHSRR---ILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLG 242
Query: 232 SHVST--RVMGTHGYCAPEYATTGKLTAKSDIFSFGVVLLELITG 274
+ T + GT + APE AK D++S ++L ++ G
Sbjct: 243 KSLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 287
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 94/208 (45%), Gaps = 14/208 (6%)
Query: 78 NFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGF---QGEKEFLVEVLMLSLMRHPNLVHL 134
FLG+GGF Y+ +T +V A K + + +++ E+ + + +P++V
Sbjct: 48 RFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGF 107
Query: 135 IGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKAD 194
G+ + +V E SL L L K + +G++YLHN
Sbjct: 108 HGFFEDDDFVYVVLEICRRRSL----LELHKRRKAVTEPEARYFMRQTIQGVQYLHNNR- 162
Query: 195 PPVIYRDLKAGNILLGKGFHPKLSDFGLA-KFGPTGDKSHVSTRVMGTHGYCAPEYATTG 253
VI+RDLK GN+ L K+ DFGLA K G++ + GT Y APE
Sbjct: 163 --VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER---KKXLCGTPNYIAPEVLCKK 217
Query: 254 KLTAKSDIFSFGVVLLELITGRPAMDDS 281
+ + DI+S G +L L+ G+P + S
Sbjct: 218 GHSFEVDIWSLGCILYTLLVGKPPFETS 245
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 96/213 (45%), Gaps = 22/213 (10%)
Query: 80 LGQGGFGAVYKGKL-----AETGQVVAVKQLDDTGFQGEKEFLVEVL--MLSLMRHPNLV 132
LG+G FG V + T + VAVK L + E L+ L ++ + H N+V
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 95
Query: 133 HLIGYCAE-GTQRLLVYEYMPLGSLEDHLLGLTPEMKP-----------LDWNTRMKIAA 180
+L+G C + G +++ E+ G+L +L E P L + +
Sbjct: 96 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSF 155
Query: 181 GAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMG 240
A+G+E+L ++ I+RDL A NILL + K+ DFGLA+
Sbjct: 156 QVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 212
Query: 241 THGYCAPEYATTGKLTAKSDIFSFGVVLLELIT 273
+ APE T +SD++SFGV+L E+ +
Sbjct: 213 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 94/208 (45%), Gaps = 14/208 (6%)
Query: 78 NFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGF---QGEKEFLVEVLMLSLMRHPNLVHL 134
FLG+GGF Y+ +T +V A K + + +++ E+ + + +P++V
Sbjct: 48 RFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGF 107
Query: 135 IGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKAD 194
G+ + +V E SL L L K + +G++YLHN
Sbjct: 108 HGFFEDDDFVYVVLEICRRRSL----LELHKRRKAVTEPEARYFMRQTIQGVQYLHNNR- 162
Query: 195 PPVIYRDLKAGNILLGKGFHPKLSDFGLA-KFGPTGDKSHVSTRVMGTHGYCAPEYATTG 253
VI+RDLK GN+ L K+ DFGLA K G++ + GT Y APE
Sbjct: 163 --VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER---KKDLCGTPNYIAPEVLCKK 217
Query: 254 KLTAKSDIFSFGVVLLELITGRPAMDDS 281
+ + DI+S G +L L+ G+P + S
Sbjct: 218 GHSFEVDIWSLGCILYTLLVGKPPFETS 245
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 98/222 (44%), Gaps = 23/222 (10%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKL-----AETGQVVAVKQLDDTGFQGEKEFLVEVL--MLS 124
D K LG+G FG V + T + VAVK L + E L+ L ++
Sbjct: 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 125 LMRHPNLVHLIGYCAE-GTQRLLVYEYMPLGSLEDHLLGLTPEMKP------------LD 171
+ H N+V+L+G C + G +++ E+ G+L +L E P L
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 146
Query: 172 WNTRMKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDK 231
+ + A+G+E+L ++ I+RDL A NILL + K+ DFGLA+
Sbjct: 147 LEHLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIXKDPD 203
Query: 232 SHVSTRVMGTHGYCAPEYATTGKLTAKSDIFSFGVVLLELIT 273
+ APE T +SD++SFGV+L E+ +
Sbjct: 204 XVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 100/211 (47%), Gaps = 29/211 (13%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFL--VEVLMLSLMRHPNLVHLIGY 137
+G+G FG V++GK G+ VAVK + E+ + E+ ++RH N++ I
Sbjct: 12 IGKGRFGEVWRGKW--RGEEVAVKIFSS---REERSWFREAEIYQTVMLRHENILGFIAA 66
Query: 138 ----CAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLH--- 190
TQ LV +Y GSL D+L T ++ + +K+A A GL +LH
Sbjct: 67 DNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLHMEI 121
Query: 191 --NKADPPVIYRDLKAGNILLGKGFHPKLSDFGLA-KFGPTGDKSHVS-TRVMGTHGYCA 246
+ P + +RDLK+ NIL+ K ++D GLA + D ++ +GT Y A
Sbjct: 122 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMA 181
Query: 247 PEYATTG------KLTAKSDIFSFGVVLLEL 271
PE + ++DI++ G+V E+
Sbjct: 182 PEVLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 100/226 (44%), Gaps = 26/226 (11%)
Query: 74 FKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLVH 133
+ + +G G FG V++ KL E+ +V K L D F+ E+ ++ +++HPN+V
Sbjct: 42 YTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKNR-----ELQIMRIVKHPNVVD 96
Query: 134 LIGYCAEGTQRL------LVYEYMP--LGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARG 185
L + + LV EY+P + H L M L M R
Sbjct: 97 LKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYM---YQLLRS 153
Query: 186 LEYLHNKADPPVIYRDLKAGNILLG--KGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHG 243
L Y+H+ + +RD+K N+LL G KL DFG AK G+ + + +
Sbjct: 154 LAYIHSIG---ICHRDIKPQNLLLDPPSGVL-KLIDFGSAKILIAGEP---NVSXICSRY 206
Query: 244 YCAPEYAT-TGKLTAKSDIFSFGVVLLELITGRPAMDDSQGHERML 288
Y APE T DI+S G V+ EL+ G+P G ++++
Sbjct: 207 YRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLV 252
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 89/197 (45%), Gaps = 12/197 (6%)
Query: 80 LGQGGFGAVYKGKLAET---GQVVAVKQLDDTGFQGEKE-FLVEVLMLSLMRHPNLVHLI 135
+G+G FG V++G VA+K + +E FL E L + HP++V LI
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 136 GYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKADP 195
G E V+ M L +L + L LD + + A + L YL +K
Sbjct: 78 GVITENP----VWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKR-- 131
Query: 196 PVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTGKL 255
++RD+ A N+L+ KL DFGL+++ S + + APE +
Sbjct: 132 -FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIK-WMAPESINFRRF 189
Query: 256 TAKSDIFSFGVVLLELI 272
T+ SD++ FGV + E++
Sbjct: 190 TSASDVWMFGVCMWEIL 206
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 104/225 (46%), Gaps = 21/225 (9%)
Query: 55 NKNKENTFTYRQLVA-ATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGE 113
K K + YR+ V AT + LG+G FG V++ + +TG AVK++ F+ E
Sbjct: 60 EKLKPVDYEYREEVHWATHQLR----LGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAE 115
Query: 114 KEFLVEVLMLSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWN 173
E++ + + P +V L G EG + E + GSL L E L +
Sbjct: 116 -----ELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQ----LVKEQGCLPED 166
Query: 174 TRMKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGK-GFHPKLSDFGLAK-FGPTGDK 231
+ A GLEYLH++ +++ D+KA N+LL G H L DFG A P G
Sbjct: 167 RALYYLGQALEGLEYLHSRR---ILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLG 223
Query: 232 SHVST--RVMGTHGYCAPEYATTGKLTAKSDIFSFGVVLLELITG 274
+ T + GT + APE AK D++S ++L ++ G
Sbjct: 224 KDLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 268
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 102/224 (45%), Gaps = 23/224 (10%)
Query: 74 FKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQG-EKEFLVEVLMLSLMRHPNLV 132
FK+T LG G F V + TG++ AVK + +G E E+ +L ++H N+V
Sbjct: 26 FKET--LGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIV 83
Query: 133 HLIGYCAEGTQRLLVYEYMPLGSLEDHLL--GLTPEMKPLDWNTRMKIAAGAARGLEYLH 190
L LV + + G L D ++ G E D +T ++ A + YLH
Sbjct: 84 ALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEK---DASTLIRQVLDA---VYYLH 137
Query: 191 NKADPPVIYRDLKAGNILL---GKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAP 247
+++RDLK N+L + +SDFGL+K GD V + GT GY AP
Sbjct: 138 RMG---IVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGD---VMSTACGTPGYVAP 191
Query: 248 EYATTGKLTAKSDIFSFGVVLLELITGRPAM---DDSQGHERML 288
E + D +S GV+ L+ G P +DS+ E++L
Sbjct: 192 EVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQIL 235
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 101/223 (45%), Gaps = 25/223 (11%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKL-----AETGQVVAVKQLDDTGFQGEKEFLVEVL--MLS 124
D K LG+G FG V + T + VAVK L + E L+ L ++
Sbjct: 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 125 LMRHPNLVHLIGYCAE-GTQRLLVYEYMPLGSLEDHLLGLTPEMKP------------LD 171
+ H N+V+L+G C + G +++ E+ G+L +L E P L
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 146
Query: 172 WNTRMKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDK 231
+ + A+G+E+L ++ I+RDL A NILL + K+ DFGLA+ D
Sbjct: 147 LEHLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLAR-DIYKDP 202
Query: 232 SHVST-RVMGTHGYCAPEYATTGKLTAKSDIFSFGVVLLELIT 273
+V + APE T +SD++SFGV+L E+ +
Sbjct: 203 DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 101/223 (45%), Gaps = 25/223 (11%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKL-----AETGQVVAVKQLDDTGFQGEKEFLVEVL--MLS 124
D K LG+G FG V + T + VAVK L + E L+ L ++
Sbjct: 29 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 88
Query: 125 LMRHPNLVHLIGYCAE-GTQRLLVYEYMPLGSLEDHLLGLTPEMKP------------LD 171
+ H N+V+L+G C + G +++ E+ G+L +L E P L
Sbjct: 89 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLT 148
Query: 172 WNTRMKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDK 231
+ + A+G+E+L ++ I+RDL A NILL + K+ DFGLA+ D
Sbjct: 149 LEHLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLAR-DIYKDP 204
Query: 232 SHVST-RVMGTHGYCAPEYATTGKLTAKSDIFSFGVVLLELIT 273
+V + APE T +SD++SFGV+L E+ +
Sbjct: 205 DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 247
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 100/211 (47%), Gaps = 29/211 (13%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFL--VEVLMLSLMRHPNLVHLIGY 137
+G+G FG V++GK G+ VAVK + E+ + E+ ++RH N++ I
Sbjct: 11 IGKGRFGEVWRGKW--RGEEVAVKIFSS---REERSWFREAEIYQTVMLRHENILGFIAA 65
Query: 138 ----CAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLH--- 190
TQ LV +Y GSL D+L T ++ + +K+A A GL +LH
Sbjct: 66 DNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLHMEI 120
Query: 191 --NKADPPVIYRDLKAGNILLGKGFHPKLSDFGLA-KFGPTGDKSHVS-TRVMGTHGYCA 246
+ P + +RDLK+ NIL+ K ++D GLA + D ++ +GT Y A
Sbjct: 121 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMA 180
Query: 247 PEYATTG------KLTAKSDIFSFGVVLLEL 271
PE + ++DI++ G+V E+
Sbjct: 181 PEVLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 97/215 (45%), Gaps = 16/215 (7%)
Query: 79 FLGQGGFGAVYKGKLAETGQVVAVKQLDDTGF----QGEKEFLVEVLMLSLMRHPNLVHL 134
FLG+GGF ++ A+T +V A K + + Q EK +E+ + + H ++V
Sbjct: 46 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREK-MSMEISIHRSLAHQHVVGF 104
Query: 135 IGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKAD 194
G+ + +V E SL L L K L G +YLH
Sbjct: 105 HGFFEDNDFVFVVLELCRRRSL----LELHKRRKALTEPEARYYLRQIVLGCQYLHRNR- 159
Query: 195 PPVIYRDLKAGNILLGKGFHPKLSDFGLA-KFGPTGDKSHVSTRVMGTHGYCAPEYATTG 253
VI+RDLK GN+ L + K+ DFGLA K G++ V + GT Y APE +
Sbjct: 160 --VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV---LCGTPNYIAPEVLSKK 214
Query: 254 KLTAKSDIFSFGVVLLELITGRPAMDDSQGHERML 288
+ + D++S G ++ L+ G+P + S E L
Sbjct: 215 GHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYL 249
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 96/214 (44%), Gaps = 7/214 (3%)
Query: 66 QLVAATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGE-KEFLVEVLMLS 124
Q+ + + +++G+G +G V VA+K++ Q + L E+ +L
Sbjct: 21 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILL 80
Query: 125 LMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAAR 184
RH N++ + T + Y+ +E L L + + L + R
Sbjct: 81 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL-KTQHLSNDHICYFLYQILR 139
Query: 185 GLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFG-PTGDKSHVSTRVMGTHG 243
GL+Y+H+ V++RDLK N+LL K+ DFGLA+ P D + + T
Sbjct: 140 GLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRW 196
Query: 244 YCAPEYATTGKLTAKS-DIFSFGVVLLELITGRP 276
Y APE K KS DI+S G +L E+++ RP
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 230
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 96/214 (44%), Gaps = 7/214 (3%)
Query: 66 QLVAATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGE-KEFLVEVLMLS 124
Q+ + + +++G+G +G V VA+K++ Q + L E+ +L
Sbjct: 22 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILL 81
Query: 125 LMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAAR 184
RH N++ + T + Y+ +E L L + + L + R
Sbjct: 82 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL-KTQHLSNDHICYFLYQILR 140
Query: 185 GLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFG-PTGDKSHVSTRVMGTHG 243
GL+Y+H+ V++RDLK N+LL K+ DFGLA+ P D + + T
Sbjct: 141 GLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRW 197
Query: 244 YCAPEYATTGKLTAKS-DIFSFGVVLLELITGRP 276
Y APE K KS DI+S G +L E+++ RP
Sbjct: 198 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 231
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 98/222 (44%), Gaps = 23/222 (10%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKL-----AETGQVVAVKQLDDTGFQGEKEFLVEVL--MLS 124
D K LG+G FG V + T + VAVK L + E L+ L ++
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 77
Query: 125 LMRHPNLVHLIGYCAE-GTQRLLVYEYMPLGSLEDHLLGLTPEMKP------------LD 171
+ H N+V+L+G C + G +++ E+ G+L +L E P L
Sbjct: 78 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 137
Query: 172 WNTRMKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDK 231
+ + A+G+E+L ++ I+RDL A NILL + K+ DFGLA+
Sbjct: 138 LEHLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIXKDPD 194
Query: 232 SHVSTRVMGTHGYCAPEYATTGKLTAKSDIFSFGVVLLELIT 273
+ APE T +SD++SFGV+L E+ +
Sbjct: 195 XVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 115/248 (46%), Gaps = 44/248 (17%)
Query: 50 LSAHENKNKENTFTYRQLVAAT-----DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQ 104
++ H + ++E YRQ + T + +++ + +G G +G+V +TG VAVK+
Sbjct: 1 MAHHHHHSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKK 60
Query: 105 LDDTGFQG---EKEFLVEVLMLSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLED--- 158
L FQ K E+ +L M+H N++ L+ + P SLE+
Sbjct: 61 LS-RPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTPARSLEEFND 107
Query: 159 -----HLLG-----LTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIYRDLKAGNIL 208
HL+G + K D + + I RGL+Y+H+ AD +I+RDLK N+
Sbjct: 108 VYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ-ILRGLKYIHS-AD--IIHRDLKPSNLA 163
Query: 209 LGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTG-KLTAKSDIFSFGVV 267
+ + K+ DFGLA+ +V+TR Y APE DI+S G +
Sbjct: 164 VNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCI 218
Query: 268 LLELITGR 275
+ EL+TGR
Sbjct: 219 MAELLTGR 226
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 101/223 (45%), Gaps = 25/223 (11%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKL-----AETGQVVAVKQLDDTGFQGEKEFLVEVL--MLS 124
D K LG+G FG V + T + VAVK L + E L+ L ++
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 77
Query: 125 LMRHPNLVHLIGYCAE-GTQRLLVYEYMPLGSLEDHLLGLTPEMKP------------LD 171
+ H N+V+L+G C + G +++ E+ G+L +L E P L
Sbjct: 78 IGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 137
Query: 172 WNTRMKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDK 231
+ + A+G+E+L ++ I+RDL A NILL + K+ DFGLA+ D
Sbjct: 138 LEHLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLAR-DIYKDP 193
Query: 232 SHVST-RVMGTHGYCAPEYATTGKLTAKSDIFSFGVVLLELIT 273
+V + APE T +SD++SFGV+L E+ +
Sbjct: 194 DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 100/204 (49%), Gaps = 22/204 (10%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGE---KEFLVEVLMLSLMRHPNLVHLIG 136
+G G +G+V +G+ VA+K+L FQ E K E+L+L M+H N++ L+
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLS-RPFQSEIFAKRAYRELLLLKHMQHENVIGLLD 90
Query: 137 YCAEGTQRLLVYEY---MPLGSLE-DHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNK 192
+ Y++ MP + ++GL + + + + +GL+Y+H+
Sbjct: 91 VFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQY-----LVYQMLKGLKYIHSA 145
Query: 193 ADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATT 252
V++RDLK GN+ + + K+ DFGLA+ +V TR Y APE +
Sbjct: 146 G---VVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTR-----WYRAPEVILS 197
Query: 253 GKLTAKS-DIFSFGVVLLELITGR 275
++ DI+S G ++ E++TG+
Sbjct: 198 WMHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 100/211 (47%), Gaps = 29/211 (13%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFL--VEVLMLSLMRHPNLVHLIGY 137
+G+G FG V++GK G+ VAVK + E+ + E+ ++RH N++ I
Sbjct: 14 IGKGRFGEVWRGKW--RGEEVAVKIFSS---REERSWFREAEIYQTVMLRHENILGFIAA 68
Query: 138 ----CAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLH--- 190
TQ LV +Y GSL D+L T ++ + +K+A A GL +LH
Sbjct: 69 DNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLHMEI 123
Query: 191 --NKADPPVIYRDLKAGNILLGKGFHPKLSDFGLA-KFGPTGDKSHVS-TRVMGTHGYCA 246
+ P + +RDLK+ NIL+ K ++D GLA + D ++ +GT Y A
Sbjct: 124 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMA 183
Query: 247 PEYATTG------KLTAKSDIFSFGVVLLEL 271
PE + ++DI++ G+V E+
Sbjct: 184 PEVLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 94/217 (43%), Gaps = 21/217 (9%)
Query: 66 QLVAATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEF---LVEVLM 122
Q A D F LG G FG V K E+G A+K LD K+ L E +
Sbjct: 35 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 123 LSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGA 182
L + P LV L + + +V EY+ G + HL + +P + R AA
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-YAAQI 150
Query: 183 ARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTR---VM 239
EYLH+ +IYRDLK N+L+ + + +++DFG AK V R +
Sbjct: 151 VLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLC 199
Query: 240 GTHGYCAPEYATTGKLTAKSDIFSFGVVLLELITGRP 276
GT Y AP + D ++ GV++ E+ G P
Sbjct: 200 GTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 93/211 (44%), Gaps = 8/211 (3%)
Query: 79 FLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLVHLIGYC 138
FLG+GGF ++ A+T +V A K + + + + +S+ R H++G+
Sbjct: 48 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 107
Query: 139 AEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVI 198
V+ + L LL L K L G +YLH VI
Sbjct: 108 GFFEDNDFVFVVLELCR-RRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNR---VI 163
Query: 199 YRDLKAGNILLGKGFHPKLSDFGLA-KFGPTGDKSHVSTRVMGTHGYCAPEYATTGKLTA 257
+RDLK GN+ L + K+ DFGLA K G++ V + GT Y APE + +
Sbjct: 164 HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV---LCGTPNYIAPEVLSKKGHSF 220
Query: 258 KSDIFSFGVVLLELITGRPAMDDSQGHERML 288
+ D++S G ++ L+ G+P + S E L
Sbjct: 221 EVDVWSIGCIMYTLLVGKPPFETSCLKETYL 251
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 98/222 (44%), Gaps = 23/222 (10%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKL-----AETGQVVAVKQLDDTGFQGEKEFLVEVL--MLS 124
D K LG+G FG V + T + VAVK L + E L+ L ++
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 77
Query: 125 LMRHPNLVHLIGYCAE-GTQRLLVYEYMPLGSLEDHLLGLTPEMKP------------LD 171
+ H N+V+L+G C + G +++ E+ G+L +L E P L
Sbjct: 78 IGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 137
Query: 172 WNTRMKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDK 231
+ + A+G+E+L ++ I+RDL A NILL + K+ DFGLA+
Sbjct: 138 LEHLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIXKDPD 194
Query: 232 SHVSTRVMGTHGYCAPEYATTGKLTAKSDIFSFGVVLLELIT 273
+ APE T +SD++SFGV+L E+ +
Sbjct: 195 XVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 97/215 (45%), Gaps = 16/215 (7%)
Query: 79 FLGQGGFGAVYKGKLAETGQVVAVKQLDDTGF----QGEKEFLVEVLMLSLMRHPNLVHL 134
FLG+GGF ++ A+T +V A K + + Q EK +E+ + + H ++V
Sbjct: 22 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREK-MSMEISIHRSLAHQHVVGF 80
Query: 135 IGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKAD 194
G+ + +V E SL L L K L G +YLH
Sbjct: 81 HGFFEDNDFVFVVLELCRRRSL----LELHKRRKALTEPEARYYLRQIVLGCQYLHRNR- 135
Query: 195 PPVIYRDLKAGNILLGKGFHPKLSDFGLA-KFGPTGDKSHVSTRVMGTHGYCAPEYATTG 253
VI+RDLK GN+ L + K+ DFGLA K G++ V + GT Y APE +
Sbjct: 136 --VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV---LCGTPNYIAPEVLSKK 190
Query: 254 KLTAKSDIFSFGVVLLELITGRPAMDDSQGHERML 288
+ + D++S G ++ L+ G+P + S E L
Sbjct: 191 GHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYL 225
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 98/222 (44%), Gaps = 23/222 (10%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKL-----AETGQVVAVKQLDDTGFQGEKEFLVEVL--MLS 124
D K LG+G FG V + T + VAVK L + E L+ L ++
Sbjct: 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 125 LMRHPNLVHLIGYCAE-GTQRLLVYEYMPLGSLEDHLLGLTPEMKP------------LD 171
+ H N+V+L+G C + G +++ E+ G+L +L E P L
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 146
Query: 172 WNTRMKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDK 231
+ + A+G+E+L ++ I+RDL A NILL + K+ DFGLA+
Sbjct: 147 LEHLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 203
Query: 232 SHVSTRVMGTHGYCAPEYATTGKLTAKSDIFSFGVVLLELIT 273
+ APE T +SD++SFGV+L E+ +
Sbjct: 204 XVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 101/223 (45%), Gaps = 25/223 (11%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKL-----AETGQVVAVKQLDDTGFQGEKEFLVEVL--MLS 124
D K LG+G FG V + T + VAVK L + E L+ L ++
Sbjct: 64 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 123
Query: 125 LMRHPNLVHLIGYCAE-GTQRLLVYEYMPLGSLEDHLLGLTPEMKP------------LD 171
+ H N+V+L+G C + G +++ E+ G+L +L E P L
Sbjct: 124 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 183
Query: 172 WNTRMKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDK 231
+ + A+G+E+L ++ I+RDL A NILL + K+ DFGLA+ D
Sbjct: 184 LEHLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLAR-DIYKDP 239
Query: 232 SHVST-RVMGTHGYCAPEYATTGKLTAKSDIFSFGVVLLELIT 273
+V + APE T +SD++SFGV+L E+ +
Sbjct: 240 DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 282
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 101/223 (45%), Gaps = 25/223 (11%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKL-----AETGQVVAVKQLDDTGFQGEKEFLVEVL--MLS 124
D K LG+G FG V + T + VAVK L + E L+ L ++
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 77
Query: 125 LMRHPNLVHLIGYCAE-GTQRLLVYEYMPLGSLEDHLLGLTPEMKP------------LD 171
+ H N+V+L+G C + G +++ E+ G+L +L E P L
Sbjct: 78 IGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 137
Query: 172 WNTRMKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDK 231
+ + A+G+E+L ++ I+RDL A NILL + K+ DFGLA+ D
Sbjct: 138 LEHLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLAR-DIYKDP 193
Query: 232 SHVST-RVMGTHGYCAPEYATTGKLTAKSDIFSFGVVLLELIT 273
+V + APE T +SD++SFGV+L E+ +
Sbjct: 194 DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 100/211 (47%), Gaps = 29/211 (13%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFL--VEVLMLSLMRHPNLVHLIGY 137
+G+G FG V++GK G+ VAVK + E+ + E+ ++RH N++ I
Sbjct: 17 IGKGRFGEVWRGKW--RGEEVAVKIFSS---REERSWFREAEIYQTVMLRHENILGFIAA 71
Query: 138 ----CAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLH--- 190
TQ LV +Y GSL D+L T ++ + +K+A A GL +LH
Sbjct: 72 DNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLHMEI 126
Query: 191 --NKADPPVIYRDLKAGNILLGKGFHPKLSDFGLA-KFGPTGDKSHVS-TRVMGTHGYCA 246
+ P + +RDLK+ NIL+ K ++D GLA + D ++ +GT Y A
Sbjct: 127 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMA 186
Query: 247 PEYATTG------KLTAKSDIFSFGVVLLEL 271
PE + ++DI++ G+V E+
Sbjct: 187 PEVLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 108/233 (46%), Gaps = 42/233 (18%)
Query: 64 YRQLVAAT-----DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQG---EKE 115
YRQ +A T + +++ + +G G +G+V +TG VAVK+L FQ K
Sbjct: 5 YRQELAKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQSIIHAKR 63
Query: 116 FLVEVLMLSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLED-HLLGLTPEMKPLDWNT 174
E+ +L M+H N++ L+ + P SLE+ + + L + D N
Sbjct: 64 TYRELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNN 111
Query: 175 RMKIAA-----------GAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLA 223
+K A RGL+Y+H+ AD +I+RDLK N+ + + K+ DFGLA
Sbjct: 112 IVKCAKLTDDHVQFLIYQILRGLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLA 168
Query: 224 KFGPTGDKSHVSTRVMGTHGYCAPEYATTG-KLTAKSDIFSFGVVLLELITGR 275
+ +V+TR Y APE DI+S G ++ EL+TGR
Sbjct: 169 RHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 89/197 (45%), Gaps = 12/197 (6%)
Query: 80 LGQGGFGAVYKGKLAET---GQVVAVKQLDDTGFQGEKE-FLVEVLMLSLMRHPNLVHLI 135
+G+G FG V++G VA+K + +E FL E L + HP++V LI
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 136 GYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKADP 195
G E V+ M L +L + L LD + + A + L YL +K
Sbjct: 78 GVITENP----VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR-- 131
Query: 196 PVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTGKL 255
++RD+ A N+L+ KL DFGL+++ S + + APE +
Sbjct: 132 -FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK-WMAPESINFRRF 189
Query: 256 TAKSDIFSFGVVLLELI 272
T+ SD++ FGV + E++
Sbjct: 190 TSASDVWMFGVCMWEIL 206
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 100/211 (47%), Gaps = 29/211 (13%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFL--VEVLMLSLMRHPNLVHLIGY 137
+G+G FG V++GK G+ VAVK + E+ + E+ ++RH N++ I
Sbjct: 37 IGKGRFGEVWRGKW--RGEEVAVKIFSS---REERSWFREAEIYQTVMLRHENILGFIAA 91
Query: 138 ----CAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLH--- 190
TQ LV +Y GSL D+L T ++ + +K+A A GL +LH
Sbjct: 92 DNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLHMEI 146
Query: 191 --NKADPPVIYRDLKAGNILLGKGFHPKLSDFGLA-KFGPTGDKSHVS-TRVMGTHGYCA 246
+ P + +RDLK+ NIL+ K ++D GLA + D ++ +GT Y A
Sbjct: 147 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMA 206
Query: 247 PEYATTG------KLTAKSDIFSFGVVLLEL 271
PE + ++DI++ G+V E+
Sbjct: 207 PEVLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 100/211 (47%), Gaps = 29/211 (13%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFL--VEVLMLSLMRHPNLVHLIGY 137
+G+G FG V++GK G+ VAVK + E+ + E+ ++RH N++ I
Sbjct: 50 IGKGRFGEVWRGKW--RGEEVAVKIFSS---REERSWFREAEIYQTVMLRHENILGFIAA 104
Query: 138 ----CAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLH--- 190
TQ LV +Y GSL D+L T ++ + +K+A A GL +LH
Sbjct: 105 DNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLHMEI 159
Query: 191 --NKADPPVIYRDLKAGNILLGKGFHPKLSDFGLA-KFGPTGDKSHVS-TRVMGTHGYCA 246
+ P + +RDLK+ NIL+ K ++D GLA + D ++ +GT Y A
Sbjct: 160 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMA 219
Query: 247 PEYATTG------KLTAKSDIFSFGVVLLEL 271
PE + ++DI++ G+V E+
Sbjct: 220 PEVLDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 96/210 (45%), Gaps = 13/210 (6%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNL 131
D D LG+G +G VY G+ +A+K++ + + + E+ + ++H N+
Sbjct: 22 DENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNI 81
Query: 132 VHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMK--IAAGAARGLEYL 189
V +G +E + E +P GSL L + PL N + GL+YL
Sbjct: 82 VQYLGSFSENGFIKIFMEQVPGGSLSAL---LRSKWGPLKDNEQTIGFYTKQILEGLKYL 138
Query: 190 HNKADPPVIYRDLKAGNILLGK-GFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPE 248
H D +++RD+K N+L+ K+SDFG +K + + GT Y APE
Sbjct: 139 H---DNQIVHRDIKGDNVLINTYSGVLKISDFGTSK--RLAGINPCTETFTGTLQYMAPE 193
Query: 249 YATTGK--LTAKSDIFSFGVVLLELITGRP 276
G +DI+S G ++E+ TG+P
Sbjct: 194 IIDKGPRGYGKAADIWSLGCTIIEMATGKP 223
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 96/207 (46%), Gaps = 15/207 (7%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLD-DTGFQGEKEFLVEVLMLSLMRHPN 130
D+F+ + LG G G V+K +G V+A K + + + + E+ +L P
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 131 LVHLIGYCAEGTQRLLVYEYMPLGSLEDHL--LGLTPEMKPLDWNTRMKIAAGAARGLEY 188
+V G + + E+M GSL+ L G PE K++ +GL Y
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE------QILGKVSIAVIKGLTY 119
Query: 189 LHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPE 248
L K +++RD+K NIL+ KL DFG++ G D ++ +GT Y +PE
Sbjct: 120 LREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MANSFVGTRSYMSPE 173
Query: 249 YATTGKLTAKSDIFSFGVVLLELITGR 275
+ +SDI+S G+ L+E+ GR
Sbjct: 174 RLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 97/207 (46%), Gaps = 15/207 (7%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLD-DTGFQGEKEFLVEVLMLSLMRHPN 130
D+F+ + LG G G V+K +G V+A K + + + + E+ +L P
Sbjct: 9 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 68
Query: 131 LVHLIGYCAEGTQRLLVYEYMPLGSLEDHL--LGLTPEMKPLDWNTRMKIAAGAARGLEY 188
+V G + + E+M GSL+ L G PE K++ +GL Y
Sbjct: 69 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE------QILGKVSIAVIKGLTY 122
Query: 189 LHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPE 248
L K +++RD+K NIL+ KL DFG++ G D+ ++ +GT Y +PE
Sbjct: 123 LREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDE--MANEFVGTRSYMSPE 176
Query: 249 YATTGKLTAKSDIFSFGVVLLELITGR 275
+ +SDI+S G+ L+E+ GR
Sbjct: 177 RLQGTHYSVQSDIWSMGLSLVEMAVGR 203
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 100/204 (49%), Gaps = 22/204 (10%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGE---KEFLVEVLMLSLMRHPNLVHLIG 136
+G G +G+V +G+ VA+K+L FQ E K E+L+L M+H N++ L+
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLS-RPFQSEIFAKRAYRELLLLKHMQHENVIGLLD 108
Query: 137 YCAEGTQRLLVYEY---MPLGSLE-DHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNK 192
+ Y++ MP + ++G+ + + + + +GL+Y+H+
Sbjct: 109 VFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQY-----LVYQMLKGLKYIHSA 163
Query: 193 ADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATT 252
V++RDLK GN+ + + K+ DFGLA+ +V TR Y APE +
Sbjct: 164 G---VVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTR-----WYRAPEVILS 215
Query: 253 GKLTAKS-DIFSFGVVLLELITGR 275
++ DI+S G ++ E++TG+
Sbjct: 216 WMHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 89/197 (45%), Gaps = 12/197 (6%)
Query: 80 LGQGGFGAVYKGKLAET---GQVVAVKQLDDTGFQGEKE-FLVEVLMLSLMRHPNLVHLI 135
+G+G FG V++G VA+K + +E FL E L + HP++V LI
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 136 GYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKADP 195
G E V+ M L +L + L LD + + A + L YL +K
Sbjct: 78 GVITENP----VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR-- 131
Query: 196 PVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTGKL 255
++RD+ A N+L+ KL DFGL+++ S + + APE +
Sbjct: 132 -FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK-WMAPESINFRRF 189
Query: 256 TAKSDIFSFGVVLLELI 272
T+ SD++ FGV + E++
Sbjct: 190 TSASDVWMFGVCMWEIL 206
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 114/250 (45%), Gaps = 44/250 (17%)
Query: 48 DTLSAHENKNKENTFTYRQLVAAT-----DNFKDTNFLGQGGFGAVYKGKLAETGQVVAV 102
+ L N ++E YRQ + T + +++ + +G G +G+V +TG VAV
Sbjct: 16 ENLYFQSNASQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAV 75
Query: 103 KQLDDTGFQG---EKEFLVEVLMLSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLED- 158
K+L FQ K E+ +L M+H N++ L+ + P SLE+
Sbjct: 76 KKLS-RPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTPARSLEEF 122
Query: 159 -------HLLG-----LTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIYRDLKAGN 206
HL+G + K D + + I RGL+Y+H+ AD +I+RDLK N
Sbjct: 123 NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ-ILRGLKYIHS-AD--IIHRDLKPSN 178
Query: 207 ILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTG-KLTAKSDIFSFG 265
+ + + K+ DFGLA+ +V+TR Y APE DI+S G
Sbjct: 179 LAVNEDCELKILDFGLARHTDDEMXGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVG 233
Query: 266 VVLLELITGR 275
++ EL+TGR
Sbjct: 234 CIMAELLTGR 243
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 89/197 (45%), Gaps = 12/197 (6%)
Query: 80 LGQGGFGAVYKGKLAET---GQVVAVKQLDDTGFQGEKE-FLVEVLMLSLMRHPNLVHLI 135
+G+G FG V++G VA+K + +E FL E L + HP++V LI
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 136 GYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKADP 195
G E V+ M L +L + L LD + + A + L YL +K
Sbjct: 80 GVITENP----VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR-- 133
Query: 196 PVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTGKL 255
++RD+ A N+L+ KL DFGL+++ S + + APE +
Sbjct: 134 -FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK-WMAPESINFRRF 191
Query: 256 TAKSDIFSFGVVLLELI 272
T+ SD++ FGV + E++
Sbjct: 192 TSASDVWMFGVCMWEIL 208
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 98/219 (44%), Gaps = 14/219 (6%)
Query: 71 TDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGE--KEFLVEVLMLSLMRH 128
TD ++ LG+G F V + TGQ A K ++ ++ E + L++H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 129 PNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEY 188
PN+V L +E LV++ + G L + ++ ++ + + + LE
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAR-------EYYSEADASHCIQQILES 115
Query: 189 LHNKADPPVIYRDLKAGNILLG---KGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYC 245
+++ +++RDLK N+LL KG KL+DFGLA GD+ GT GY
Sbjct: 116 VNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQGDQ-QAWFGFAGTPGYL 173
Query: 246 APEYATTGKLTAKSDIFSFGVVLLELITGRPAMDDSQGH 284
+PE D+++ GV+L L+ G P D H
Sbjct: 174 SPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWDEDQH 212
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 99/221 (44%), Gaps = 14/221 (6%)
Query: 69 AATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGE--KEFLVEVLMLSLM 126
+ TD ++ LG+G F V + TGQ A K ++ ++ E + L+
Sbjct: 1 SMTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLL 60
Query: 127 RHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGL 186
+HPN+V L +E LV++ + G L + ++ ++ + + + L
Sbjct: 61 KHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAR-------EYYSEADASHCIQQIL 113
Query: 187 EYLHNKADPPVIYRDLKAGNILLG---KGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHG 243
E +++ +++RDLK N+LL KG KL+DFGLA GD+ GT G
Sbjct: 114 ESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQGDQ-QAWFGFAGTPG 171
Query: 244 YCAPEYATTGKLTAKSDIFSFGVVLLELITGRPAMDDSQGH 284
Y +PE D+++ GV+L L+ G P D H
Sbjct: 172 YLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWDEDQH 212
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 89/197 (45%), Gaps = 12/197 (6%)
Query: 80 LGQGGFGAVYKGKLAET---GQVVAVKQLDDTGFQGEKE-FLVEVLMLSLMRHPNLVHLI 135
+G+G FG V++G VA+K + +E FL E L + HP++V LI
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 136 GYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKADP 195
G E V+ M L +L + L LD + + A + L YL +K
Sbjct: 75 GVITENP----VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR-- 128
Query: 196 PVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTGKL 255
++RD+ A N+L+ KL DFGL+++ S + + APE +
Sbjct: 129 -FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK-WMAPESINFRRF 186
Query: 256 TAKSDIFSFGVVLLELI 272
T+ SD++ FGV + E++
Sbjct: 187 TSASDVWMFGVCMWEIL 203
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 89/197 (45%), Gaps = 12/197 (6%)
Query: 80 LGQGGFGAVYKGKLAET---GQVVAVKQLDDTGFQGEKE-FLVEVLMLSLMRHPNLVHLI 135
+G+G FG V++G VA+K + +E FL E L + HP++V LI
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 136 GYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKADP 195
G E V+ M L +L + L LD + + A + L YL +K
Sbjct: 83 GVITENP----VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR-- 136
Query: 196 PVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTGKL 255
++RD+ A N+L+ KL DFGL+++ S + + APE +
Sbjct: 137 -FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK-WMAPESINFRRF 194
Query: 256 TAKSDIFSFGVVLLELI 272
T+ SD++ FGV + E++
Sbjct: 195 TSASDVWMFGVCMWEIL 211
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 89/197 (45%), Gaps = 12/197 (6%)
Query: 80 LGQGGFGAVYKGKLAET---GQVVAVKQLDDTGFQGEKE-FLVEVLMLSLMRHPNLVHLI 135
+G+G FG V++G VA+K + +E FL E L + HP++V LI
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 136 GYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKADP 195
G E V+ M L +L + L LD + + A + L YL +K
Sbjct: 106 GVITENP----VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR-- 159
Query: 196 PVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTGKL 255
++RD+ A N+L+ KL DFGL+++ S + + APE +
Sbjct: 160 -FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK-WMAPESINFRRF 217
Query: 256 TAKSDIFSFGVVLLELI 272
T+ SD++ FGV + E++
Sbjct: 218 TSASDVWMFGVCMWEIL 234
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 94/217 (43%), Gaps = 21/217 (9%)
Query: 66 QLVAATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEF---LVEVLM 122
Q A D F LG G FG V K E+G A+K LD K+ L E +
Sbjct: 35 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 123 LSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGA 182
L + P LV L + + +V EY+ G + HL + +P + R AA
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-YAAQI 150
Query: 183 ARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTR---VM 239
EYLH+ +IYRDLK N+L+ + + +++DFG AK V R +
Sbjct: 151 VLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLC 199
Query: 240 GTHGYCAPEYATTGKLTAKSDIFSFGVVLLELITGRP 276
GT APE + D ++ GV++ E+ G P
Sbjct: 200 GTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 89/197 (45%), Gaps = 12/197 (6%)
Query: 80 LGQGGFGAVYKGKLAET---GQVVAVKQLDDTGFQGEKE-FLVEVLMLSLMRHPNLVHLI 135
+G+G FG V++G VA+K + +E FL E L + HP++V LI
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 136 GYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKADP 195
G E V+ M L +L + L LD + + A + L YL +K
Sbjct: 81 GVITENP----VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR-- 134
Query: 196 PVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTGKL 255
++RD+ A N+L+ KL DFGL+++ S + + APE +
Sbjct: 135 -FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK-WMAPESINFRRF 192
Query: 256 TAKSDIFSFGVVLLELI 272
T+ SD++ FGV + E++
Sbjct: 193 TSASDVWMFGVCMWEIL 209
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 92/212 (43%), Gaps = 17/212 (8%)
Query: 71 TDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGF---QGEKEFLVEVLMLSLMR 127
+D ++ LG G +G V K TG A+K + + L EV +L +
Sbjct: 3 SDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD 62
Query: 128 HPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLE 187
HPN++ L + + LV E G L D ++ L + +D MK G
Sbjct: 63 HPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEII-LRQKFSEVDAAVIMK---QVLSGTT 118
Query: 188 YLHNKADPPVIYRDLKAGNILL---GKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGY 244
YLH +++RDLK N+LL + K+ DFGL+ G K +GT Y
Sbjct: 119 YLHKH---NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKM---KERLGTAYY 172
Query: 245 CAPEYATTGKLTAKSDIFSFGVVLLELITGRP 276
APE K K D++S GV+L L+ G P
Sbjct: 173 IAPE-VLRKKYDEKCDVWSCGVILYILLCGYP 203
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 92/212 (43%), Gaps = 17/212 (8%)
Query: 71 TDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGF---QGEKEFLVEVLMLSLMR 127
+D ++ LG G +G V K TG A+K + + L EV +L +
Sbjct: 20 SDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD 79
Query: 128 HPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLE 187
HPN++ L + + LV E G L D ++ L + +D MK G
Sbjct: 80 HPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEII-LRQKFSEVDAAVIMK---QVLSGTT 135
Query: 188 YLHNKADPPVIYRDLKAGNILL---GKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGY 244
YLH +++RDLK N+LL + K+ DFGL+ G K +GT Y
Sbjct: 136 YLHKHN---IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKM---KERLGTAYY 189
Query: 245 CAPEYATTGKLTAKSDIFSFGVVLLELITGRP 276
APE K K D++S GV+L L+ G P
Sbjct: 190 IAPE-VLRKKYDEKCDVWSCGVILYILLCGYP 220
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 96/207 (46%), Gaps = 15/207 (7%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLD-DTGFQGEKEFLVEVLMLSLMRHPN 130
D+F+ + LG G G V+K +G V+A K + + + + E+ +L P
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 131 LVHLIGYCAEGTQRLLVYEYMPLGSLEDHL--LGLTPEMKPLDWNTRMKIAAGAARGLEY 188
+V G + + E+M GSL+ L G PE K++ +GL Y
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE------QILGKVSIAVIKGLTY 119
Query: 189 LHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPE 248
L K +++RD+K NIL+ KL DFG++ G D ++ +GT Y +PE
Sbjct: 120 LREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MANSFVGTRSYMSPE 173
Query: 249 YATTGKLTAKSDIFSFGVVLLELITGR 275
+ +SDI+S G+ L+E+ GR
Sbjct: 174 RLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 96/207 (46%), Gaps = 15/207 (7%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLD-DTGFQGEKEFLVEVLMLSLMRHPN 130
D+F+ + LG G G V+K +G V+A K + + + + E+ +L P
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 131 LVHLIGYCAEGTQRLLVYEYMPLGSLEDHL--LGLTPEMKPLDWNTRMKIAAGAARGLEY 188
+V G + + E+M GSL+ L G PE K++ +GL Y
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE------QILGKVSIAVIKGLTY 119
Query: 189 LHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPE 248
L K +++RD+K NIL+ KL DFG++ G D ++ +GT Y +PE
Sbjct: 120 LREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MANSFVGTRSYMSPE 173
Query: 249 YATTGKLTAKSDIFSFGVVLLELITGR 275
+ +SDI+S G+ L+E+ GR
Sbjct: 174 RLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 96/207 (46%), Gaps = 15/207 (7%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLD-DTGFQGEKEFLVEVLMLSLMRHPN 130
D+F+ + LG G G V+K +G V+A K + + + + E+ +L P
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 131 LVHLIGYCAEGTQRLLVYEYMPLGSLEDHL--LGLTPEMKPLDWNTRMKIAAGAARGLEY 188
+V G + + E+M GSL+ L G PE K++ +GL Y
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE------QILGKVSIAVIKGLTY 119
Query: 189 LHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPE 248
L K +++RD+K NIL+ KL DFG++ G D ++ +GT Y +PE
Sbjct: 120 LREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MANSFVGTRSYMSPE 173
Query: 249 YATTGKLTAKSDIFSFGVVLLELITGR 275
+ +SDI+S G+ L+E+ GR
Sbjct: 174 RLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 97/208 (46%), Gaps = 12/208 (5%)
Query: 70 ATDNFKDTNFLGQGGFGAVYKGKLAE-TGQV--VAVKQLD-DTGFQGEKEFLVEVLMLSL 125
A ++ LG+G FG VY+G G+ VAVK D +++F+ E +++
Sbjct: 6 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 65
Query: 126 MRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARG 185
+ HP++V LIG E +++ E P G L +L +K L T + + +
Sbjct: 66 LDHPHIVKLIGIIEEEPTWIIM-ELYPYGELGHYLERNKNSLKVL---TLVLYSLQICKA 121
Query: 186 LEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYC 245
+ YL + ++RD+ NIL+ KL DFGL+++ D S + +
Sbjct: 122 MAYLESIN---CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIK-WM 177
Query: 246 APEYATTGKLTAKSDIFSFGVVLLELIT 273
+PE + T SD++ F V + E+++
Sbjct: 178 SPESINFRRFTTASDVWMFAVCMWEILS 205
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 96/210 (45%), Gaps = 13/210 (6%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNL 131
D D LG+G +G VY G+ +A+K++ + + + E+ + ++H N+
Sbjct: 8 DENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNI 67
Query: 132 VHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMK--IAAGAARGLEYL 189
V +G +E + E +P GSL L + PL N + GL+YL
Sbjct: 68 VQYLGSFSENGFIKIFMEQVPGGSLSAL---LRSKWGPLKDNEQTIGFYTKQILEGLKYL 124
Query: 190 HNKADPPVIYRDLKAGNILLGK-GFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPE 248
H D +++RD+K N+L+ K+SDFG +K + + GT Y APE
Sbjct: 125 H---DNQIVHRDIKGDNVLINTYSGVLKISDFGTSK--RLAGINPCTETFTGTLQYMAPE 179
Query: 249 YATTGK--LTAKSDIFSFGVVLLELITGRP 276
G +DI+S G ++E+ TG+P
Sbjct: 180 IIDKGPRGYGKAADIWSLGCTIIEMATGKP 209
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 89/197 (45%), Gaps = 12/197 (6%)
Query: 80 LGQGGFGAVYKGKLAET---GQVVAVKQLDDTGFQGEKE-FLVEVLMLSLMRHPNLVHLI 135
+G+G FG V++G VA+K + +E FL E L + HP++V LI
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 136 GYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKADP 195
G E V+ M L +L + L LD + + A + L YL +K
Sbjct: 78 GVITENP----VWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKR-- 131
Query: 196 PVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTGKL 255
++RD+ A N+L+ KL DFGL+++ S + + APE +
Sbjct: 132 -FVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIK-WMAPESINFRRF 189
Query: 256 TAKSDIFSFGVVLLELI 272
T+ SD++ FGV + E++
Sbjct: 190 TSASDVWMFGVCMWEIL 206
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 96/207 (46%), Gaps = 15/207 (7%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLD-DTGFQGEKEFLVEVLMLSLMRHPN 130
D+F+ + LG G G V+K +G V+A K + + + + E+ +L P
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 131 LVHLIGYCAEGTQRLLVYEYMPLGSLEDHL--LGLTPEMKPLDWNTRMKIAAGAARGLEY 188
+V G + + E+M GSL+ L G PE K++ +GL Y
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE------QILGKVSIAVIKGLTY 119
Query: 189 LHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPE 248
L K +++RD+K NIL+ KL DFG++ G D ++ +GT Y +PE
Sbjct: 120 LREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MANSFVGTRSYMSPE 173
Query: 249 YATTGKLTAKSDIFSFGVVLLELITGR 275
+ +SDI+S G+ L+E+ GR
Sbjct: 174 RLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 92/217 (42%), Gaps = 25/217 (11%)
Query: 73 NFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQL---------DDTGFQGEKEFLVEVLML 123
+F +G+G + V +L +T ++ A+K + D Q EK +
Sbjct: 6 DFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQA--- 62
Query: 124 SLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAA 183
HP LV L ++ V EY+ G L H+ + L +A +
Sbjct: 63 --SNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHM----QRQRKLPEEHARFYSAEIS 116
Query: 184 RGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFG-PTGDKSHVSTRVMGTH 242
L YLH + +IYRDLK N+LL H KL+D+G+ K G GD ++ GT
Sbjct: 117 LALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD---TTSXFCGTP 170
Query: 243 GYCAPEYATTGKLTAKSDIFSFGVVLLELITGRPAMD 279
Y APE D ++ GV++ E++ GR D
Sbjct: 171 NYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 207
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 98/212 (46%), Gaps = 12/212 (5%)
Query: 66 QLVAATDNFKDTNFLGQGGFGAVYKGKLAE-TGQV--VAVKQLD-DTGFQGEKEFLVEVL 121
Q A ++ LG+G FG VY+G G+ VAVK D +++F+ E +
Sbjct: 18 QYGIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAV 77
Query: 122 MLSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAG 181
++ + HP++V LIG E +++ E P G L +L +K L T + +
Sbjct: 78 IMKNLDHPHIVKLIGIIEEEPTWIIM-ELYPYGELGHYLERNKNSLKVL---TLVLYSLQ 133
Query: 182 AARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGT 241
+ + YL + ++RD+ NIL+ KL DFGL+++ D S +
Sbjct: 134 ICKAMAYLESIN---CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPI 190
Query: 242 HGYCAPEYATTGKLTAKSDIFSFGVVLLELIT 273
+ +PE + T SD++ F V + E+++
Sbjct: 191 K-WMSPESINFRRFTTASDVWMFAVCMWEILS 221
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 92/217 (42%), Gaps = 25/217 (11%)
Query: 73 NFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQL---------DDTGFQGEKEFLVEVLML 123
+F +G+G + V +L +T ++ A+K + D Q EK +
Sbjct: 21 DFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQA--- 77
Query: 124 SLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAA 183
HP LV L ++ V EY+ G L H+ + L +A +
Sbjct: 78 --SNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHM----QRQRKLPEEHARFYSAEIS 131
Query: 184 RGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFG-PTGDKSHVSTRVMGTH 242
L YLH + +IYRDLK N+LL H KL+D+G+ K G GD ++ GT
Sbjct: 132 LALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD---TTSXFCGTP 185
Query: 243 GYCAPEYATTGKLTAKSDIFSFGVVLLELITGRPAMD 279
Y APE D ++ GV++ E++ GR D
Sbjct: 186 NYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 222
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 98/212 (46%), Gaps = 12/212 (5%)
Query: 66 QLVAATDNFKDTNFLGQGGFGAVYKGKLAE-TGQV--VAVKQLD-DTGFQGEKEFLVEVL 121
Q A ++ LG+G FG VY+G G+ VAVK D +++F+ E +
Sbjct: 6 QYGIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAV 65
Query: 122 MLSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAG 181
++ + HP++V LIG E +++ E P G L +L +K L T + +
Sbjct: 66 IMKNLDHPHIVKLIGIIEEEPTWIIM-ELYPYGELGHYLERNKNSLKVL---TLVLYSLQ 121
Query: 182 AARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGT 241
+ + YL + ++RD+ NIL+ KL DFGL+++ D S +
Sbjct: 122 ICKAMAYLESIN---CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPI 178
Query: 242 HGYCAPEYATTGKLTAKSDIFSFGVVLLELIT 273
+ +PE + T SD++ F V + E+++
Sbjct: 179 K-WMSPESINFRRFTTASDVWMFAVCMWEILS 209
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 96/215 (44%), Gaps = 16/215 (7%)
Query: 79 FLGQGGFGAVYKGKLAETGQVVAVKQLDDTGF----QGEKEFLVEVLMLSLMRHPNLVHL 134
FLG+GGF ++ A+T +V A K + + Q EK +E+ + + H ++V
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREK-MSMEISIHRSLAHQHVVGF 82
Query: 135 IGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKAD 194
G+ + +V E SL L L K L G +YLH
Sbjct: 83 HGFFEDNDFVFVVLELCRRRSL----LELHKRRKALTEPEARYYLRQIVLGCQYLHRNR- 137
Query: 195 PPVIYRDLKAGNILLGKGFHPKLSDFGLA-KFGPTGDKSHVSTRVMGTHGYCAPEYATTG 253
VI+RDLK GN+ L + K+ DFGLA K G++ + GT Y APE +
Sbjct: 138 --VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT---LCGTPNYIAPEVLSKK 192
Query: 254 KLTAKSDIFSFGVVLLELITGRPAMDDSQGHERML 288
+ + D++S G ++ L+ G+P + S E L
Sbjct: 193 GHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYL 227
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 92/217 (42%), Gaps = 25/217 (11%)
Query: 73 NFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQL---------DDTGFQGEKEFLVEVLML 123
+F +G+G + V +L +T ++ A+K + D Q EK +
Sbjct: 10 DFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQA--- 66
Query: 124 SLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAA 183
HP LV L ++ V EY+ G L H+ + L +A +
Sbjct: 67 --SNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHM----QRQRKLPEEHARFYSAEIS 120
Query: 184 RGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFG-PTGDKSHVSTRVMGTH 242
L YLH + +IYRDLK N+LL H KL+D+G+ K G GD ++ GT
Sbjct: 121 LALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD---TTSXFCGTP 174
Query: 243 GYCAPEYATTGKLTAKSDIFSFGVVLLELITGRPAMD 279
Y APE D ++ GV++ E++ GR D
Sbjct: 175 NYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 211
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 101/224 (45%), Gaps = 18/224 (8%)
Query: 65 RQLVAATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLD--DTGFQGEKEFLVEVLM 122
R + + +F+ + LG+G +G V TG++VA+K+++ D + L E+ +
Sbjct: 4 RIVYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRT-LREIKI 62
Query: 123 LSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGA 182
L +H N++ + + Y+ ++ L + D + + I
Sbjct: 63 LKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQ-T 121
Query: 183 ARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKF---------GPTGDKSH 233
R ++ LH VI+RDLK N+L+ K+ DFGLA+ PTG +S
Sbjct: 122 LRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSG 178
Query: 234 VSTRVMGTHGYCAPEYA-TTGKLTAKSDIFSFGVVLLELITGRP 276
+ T + T Y APE T+ K + D++S G +L EL RP
Sbjct: 179 M-TEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRP 221
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 101/224 (45%), Gaps = 18/224 (8%)
Query: 65 RQLVAATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLD--DTGFQGEKEFLVEVLM 122
R + + +F+ + LG+G +G V TG++VA+K+++ D + L E+ +
Sbjct: 4 RIVYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRT-LREIKI 62
Query: 123 LSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGA 182
L +H N++ + + Y+ ++ L + D + + I
Sbjct: 63 LKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQ-T 121
Query: 183 ARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKF---------GPTGDKSH 233
R ++ LH VI+RDLK N+L+ K+ DFGLA+ PTG +S
Sbjct: 122 LRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSG 178
Query: 234 VSTRVMGTHGYCAPEYA-TTGKLTAKSDIFSFGVVLLELITGRP 276
+ T + T Y APE T+ K + D++S G +L EL RP
Sbjct: 179 M-TEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRP 221
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 101/222 (45%), Gaps = 22/222 (9%)
Query: 67 LVAATDNFKDTNFLGQGGFGAVYKGK-LAETGQVVAVKQLD-DTGFQGE-----KEFLVE 119
L A ++ +G+G +G V+K + L G+ VA+K++ TG +G +E V
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAV- 64
Query: 120 VLMLSLMRHPNLVHLIGYCA-----EGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNT 174
+ L HPN+V L C T+ LV+E++ L +L + P + T
Sbjct: 65 LRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTE--T 121
Query: 175 RMKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHV 234
+ RGL++LH+ V++RDLK NIL+ KL+DFGLA+
Sbjct: 122 IKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIYSF---QMA 175
Query: 235 STRVMGTHGYCAPEYATTGKLTAKSDIFSFGVVLLELITGRP 276
T V+ T Y APE D++S G + E+ +P
Sbjct: 176 LTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKP 217
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 98/211 (46%), Gaps = 12/211 (5%)
Query: 71 TDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSL--MRH 128
D+ + LG+G +G V K + +GQ++AVK++ T E++ L+ L +S+ +
Sbjct: 50 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDC 109
Query: 129 PNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEY 188
P V G + E M SL+ + + + + + KIA + LE+
Sbjct: 110 PFTVTFYGALFREGDVWICMELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEH 168
Query: 189 LHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPE 248
LH+K VI+RD+K N+L+ K+ DFG++ + S T G Y APE
Sbjct: 169 LHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLV---DSVAKTIDAGCKPYMAPE 223
Query: 249 YA----TTGKLTAKSDIFSFGVVLLELITGR 275
+ KSDI+S G+ ++EL R
Sbjct: 224 RINPELNQKGYSVKSDIWSLGITMIELAILR 254
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 96/215 (44%), Gaps = 16/215 (7%)
Query: 79 FLGQGGFGAVYKGKLAETGQVVAVKQLDDTGF----QGEKEFLVEVLMLSLMRHPNLVHL 134
FLG+GGF ++ A+T +V A K + + Q EK +E+ + + H ++V
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREK-MSMEISIHRSLAHQHVVGF 82
Query: 135 IGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKAD 194
G+ + +V E SL L L K L G +YLH
Sbjct: 83 HGFFEDNDFVFVVLELCRRRSL----LELHKRRKALTEPEARYYLRQIVLGCQYLHRNR- 137
Query: 195 PPVIYRDLKAGNILLGKGFHPKLSDFGLA-KFGPTGDKSHVSTRVMGTHGYCAPEYATTG 253
VI+RDLK GN+ L + K+ DFGLA K G++ + GT Y APE +
Sbjct: 138 --VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT---LCGTPNYIAPEVLSKK 192
Query: 254 KLTAKSDIFSFGVVLLELITGRPAMDDSQGHERML 288
+ + D++S G ++ L+ G+P + S E L
Sbjct: 193 GHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYL 227
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 108/227 (47%), Gaps = 25/227 (11%)
Query: 73 NFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQ-LDDTGFQGEKEFLVEVLMLSLMRHPNL 131
++ DT +G G FG VY+ KL ++G++VA+K+ L D F+ E+ ++ + H N+
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-----ELQIMRKLDHCNI 75
Query: 132 VHL-IGYCAEGTQRLLVY-----EYMP--LGSLEDHLLGLTPEMKPLDWNTRMKIAAGAA 183
V L + + G ++ +VY +Y+P + + H + + M
Sbjct: 76 VRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM---YQLF 132
Query: 184 RGLEYLHNKADPPVIYRDLKAGNILLGKGFHP-KLSDFGLAKFGPTGDKSHVSTRVMGTH 242
R L Y+H+ + +RD+K N+LL KL DFG AK G+ + + +
Sbjct: 133 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSR 186
Query: 243 GYCAPEYAT-TGKLTAKSDIFSFGVVLLELITGRPAMDDSQGHERML 288
Y APE T+ D++S G VL EL+ G+P G ++++
Sbjct: 187 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 233
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 96/215 (44%), Gaps = 16/215 (7%)
Query: 79 FLGQGGFGAVYKGKLAETGQVVAVKQLDDTGF----QGEKEFLVEVLMLSLMRHPNLVHL 134
FLG+GGF ++ A+T +V A K + + Q EK +E+ + + H ++V
Sbjct: 28 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREK-MSMEISIHRSLAHQHVVGF 86
Query: 135 IGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKAD 194
G+ + +V E SL L L K L G +YLH
Sbjct: 87 HGFFEDNDFVFVVLELCRRRSL----LELHKRRKALTEPEARYYLRQIVLGCQYLHRNR- 141
Query: 195 PPVIYRDLKAGNILLGKGFHPKLSDFGLA-KFGPTGDKSHVSTRVMGTHGYCAPEYATTG 253
VI+RDLK GN+ L + K+ DFGLA K G++ + GT Y APE +
Sbjct: 142 --VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT---LCGTPNYIAPEVLSKK 196
Query: 254 KLTAKSDIFSFGVVLLELITGRPAMDDSQGHERML 288
+ + D++S G ++ L+ G+P + S E L
Sbjct: 197 GHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYL 231
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 97/222 (43%), Gaps = 21/222 (9%)
Query: 71 TDNFKDTNFLGQGGFGAVYKGKLAETG-----QVVAVKQLDDTGFQGEKEFLVEVLMLSL 125
+DN+ LG+G F V + TG +++ K+L FQ + E +
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLER---EARICRK 61
Query: 126 MRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARG 185
++HPN+V L E + LV++ + G L + ++ + + +I A
Sbjct: 62 LQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIA-- 119
Query: 186 LEYLHNKADPPVIYRDLKAGNILLG---KGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTH 242
Y H+ +++R+LK N+LL KG KL+DFGLA + H GT
Sbjct: 120 --YCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH---GFAGTP 171
Query: 243 GYCAPEYATTGKLTAKSDIFSFGVVLLELITGRPAMDDSQGH 284
GY +PE + DI++ GV+L L+ G P D H
Sbjct: 172 GYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH 213
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 101/222 (45%), Gaps = 22/222 (9%)
Query: 67 LVAATDNFKDTNFLGQGGFGAVYKGK-LAETGQVVAVKQLD-DTGFQGE-----KEFLVE 119
L A ++ +G+G +G V+K + L G+ VA+K++ TG +G +E V
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAV- 64
Query: 120 VLMLSLMRHPNLVHLIGYCA-----EGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNT 174
+ L HPN+V L C T+ LV+E++ L +L + P + T
Sbjct: 65 LRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTE--T 121
Query: 175 RMKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHV 234
+ RGL++LH+ V++RDLK NIL+ KL+DFGLA+
Sbjct: 122 IKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIYSF---QMA 175
Query: 235 STRVMGTHGYCAPEYATTGKLTAKSDIFSFGVVLLELITGRP 276
T V+ T Y APE D++S G + E+ +P
Sbjct: 176 LTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKP 217
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 100/225 (44%), Gaps = 19/225 (8%)
Query: 69 AATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRH 128
A +D F+ + LG+G VY+ K T + A+K L T +K E+ +L + H
Sbjct: 50 ALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKT--VDKKIVRTEIGVLLRLSH 107
Query: 129 PNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLL--GLTPEMKPLDWNTRMKIAAGAARGL 186
PN++ L T+ LV E + G L D ++ G E D ++ +
Sbjct: 108 PNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQI------LEAV 161
Query: 187 EYLHNKADPPVIYRDLKAGNILLGKGFHP---KLSDFGLAKFGPTGDKSHVSTRVMGTHG 243
YLH +++RDLK N+L K++DFGL+K + + V GT G
Sbjct: 162 AYLHENG---IVHRDLKPENLLYATPAPDAPLKIADFGLSKIV---EHQVLMKTVCGTPG 215
Query: 244 YCAPEYATTGKLTAKSDIFSFGVVLLELITGRPAMDDSQGHERML 288
YCAPE + D++S G++ L+ G D +G + M
Sbjct: 216 YCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMF 260
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 111/241 (46%), Gaps = 44/241 (18%)
Query: 57 NKENTFTYRQLVAAT-----DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQ 111
++E YRQ + T + +++ + +G G +G+V +TG VAVK+L FQ
Sbjct: 2 SQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQ 60
Query: 112 G---EKEFLVEVLMLSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLED--------HL 160
K E+ +L M+H N++ L+ + P SLE+ HL
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHL 108
Query: 161 LG-----LTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHP 215
+G + K D + + I RGL+Y+H+ AD +I+RDLK N+ + +
Sbjct: 109 MGADLNNIVKCQKLTDDHVQFLIYQ-ILRGLKYIHS-AD--IIHRDLKPSNLAVNEDCEL 164
Query: 216 KLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTG-KLTAKSDIFSFGVVLLELITG 274
K+ DFGLA+ +V+TR Y APE DI+S G ++ EL+TG
Sbjct: 165 KILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
Query: 275 R 275
R
Sbjct: 220 R 220
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 97/222 (43%), Gaps = 21/222 (9%)
Query: 71 TDNFKDTNFLGQGGFGAVYKGKLAETG-----QVVAVKQLDDTGFQGEKEFLVEVLMLSL 125
+DN+ LG+G F V + TG +++ K+L FQ + E +
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLER---EARICRK 60
Query: 126 MRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARG 185
++HPN+V L E + LV++ + G L + ++ + + +I A
Sbjct: 61 LQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIA-- 118
Query: 186 LEYLHNKADPPVIYRDLKAGNILLG---KGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTH 242
Y H+ +++R+LK N+LL KG KL+DFGLA + H GT
Sbjct: 119 --YCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH---GFAGTP 170
Query: 243 GYCAPEYATTGKLTAKSDIFSFGVVLLELITGRPAMDDSQGH 284
GY +PE + DI++ GV+L L+ G P D H
Sbjct: 171 GYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH 212
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 111/241 (46%), Gaps = 44/241 (18%)
Query: 57 NKENTFTYRQLVAAT-----DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQ 111
++E YRQ + T + +++ + +G G +G+V +TG VAVK+L FQ
Sbjct: 2 SQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQ 60
Query: 112 G---EKEFLVEVLMLSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLED--------HL 160
K E+ +L M+H N++ L+ + P SLE+ HL
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHL 108
Query: 161 LG-----LTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHP 215
+G + K D + + I RGL+Y+H+ AD +I+RDLK N+ + +
Sbjct: 109 MGADLNNIVKXQKLTDDHVQFLIYQ-ILRGLKYIHS-AD--IIHRDLKPSNLAVNEDXEL 164
Query: 216 KLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTG-KLTAKSDIFSFGVVLLELITG 274
K+ DFGLA+ +V+TR Y APE DI+S G ++ EL+TG
Sbjct: 165 KILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
Query: 275 R 275
R
Sbjct: 220 R 220
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 111/241 (46%), Gaps = 44/241 (18%)
Query: 57 NKENTFTYRQLVAAT-----DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQ 111
++E YRQ + T + +++ + +G G +G+V +TG VAVK+L FQ
Sbjct: 21 SQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQ 79
Query: 112 G---EKEFLVEVLMLSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLED--------HL 160
K E+ +L M+H N++ L+ + P SLE+ HL
Sbjct: 80 SIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHL 127
Query: 161 LG-----LTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHP 215
+G + K D + + I RGL+Y+H+ AD +I+RDLK N+ + +
Sbjct: 128 MGADLNNIVKCQKLTDDHVQFLIYQ-ILRGLKYIHS-AD--IIHRDLKPSNLAVNEDCEL 183
Query: 216 KLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTG-KLTAKSDIFSFGVVLLELITG 274
K+ DFGLA+ +V+TR Y APE DI+S G ++ EL+TG
Sbjct: 184 KILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 238
Query: 275 R 275
R
Sbjct: 239 R 239
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 97/222 (43%), Gaps = 21/222 (9%)
Query: 71 TDNFKDTNFLGQGGFGAVYKGKLAETG-----QVVAVKQLDDTGFQGEKEFLVEVLMLSL 125
+DN+ LG+G F V + TG +++ K+L FQ + E +
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLER---EARICRK 61
Query: 126 MRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARG 185
++HPN+V L E + LV++ + G L + ++ + + +I A
Sbjct: 62 LQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIA-- 119
Query: 186 LEYLHNKADPPVIYRDLKAGNILLG---KGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTH 242
Y H+ +++R+LK N+LL KG KL+DFGLA + H GT
Sbjct: 120 --YCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH---GFAGTP 171
Query: 243 GYCAPEYATTGKLTAKSDIFSFGVVLLELITGRPAMDDSQGH 284
GY +PE + DI++ GV+L L+ G P D H
Sbjct: 172 GYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH 213
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 101/222 (45%), Gaps = 22/222 (9%)
Query: 67 LVAATDNFKDTNFLGQGGFGAVYKGK-LAETGQVVAVKQLD-DTGFQGE-----KEFLVE 119
L A ++ +G+G +G V+K + L G+ VA+K++ TG +G +E V
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAV- 64
Query: 120 VLMLSLMRHPNLVHLIGYCA-----EGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNT 174
+ L HPN+V L C T+ LV+E++ L +L + P + T
Sbjct: 65 LRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTE--T 121
Query: 175 RMKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHV 234
+ RGL++LH+ V++RDLK NIL+ KL+DFGLA+
Sbjct: 122 IKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIYSF---QMA 175
Query: 235 STRVMGTHGYCAPEYATTGKLTAKSDIFSFGVVLLELITGRP 276
T V+ T Y APE D++S G + E+ +P
Sbjct: 176 LTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKP 217
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 91/213 (42%), Gaps = 15/213 (7%)
Query: 69 AATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGF---QGEKEFLVEV-LMLS 124
A +F +G+G FG V + AVK L + EK + E ++L
Sbjct: 35 AKPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLK 94
Query: 125 LMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKI-AAGAA 183
++HP LV L + V +Y+ G L HL ++P R + AA A
Sbjct: 95 NVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEP-----RARFYAAEIA 149
Query: 184 RGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHG 243
L YLH+ ++YRDLK NILL H L+DFGL K + + ++ GT
Sbjct: 150 SALGYLHSLN---IVYRDLKPENILLDSQGHIVLTDFGLCK--ENIEHNSTTSTFCGTPE 204
Query: 244 YCAPEYATTGKLTAKSDIFSFGVVLLELITGRP 276
Y APE D + G VL E++ G P
Sbjct: 205 YLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLP 237
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 113/241 (46%), Gaps = 44/241 (18%)
Query: 57 NKENTFTYRQLVAAT-----DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQ 111
++E YRQ + T + +++ + +G G +G+V +TG VAVK+L FQ
Sbjct: 2 SQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQ 60
Query: 112 G---EKEFLVEVLMLSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLED--------HL 160
K E+ +L M+H N++ L+ + P SLE+ HL
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHL 108
Query: 161 LG-----LTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHP 215
+G + K D + + I RGL+Y+H+ AD +I+RDLK N+ + +
Sbjct: 109 MGADLNNIVKXQKLTDDHVQFLIYQ-ILRGLKYIHS-AD--IIHRDLKPSNLAVNEDCEL 164
Query: 216 KLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTGKLTAKS-DIFSFGVVLLELITG 274
K+ DFGLA+ +V+TR Y APE ++ DI+S G ++ EL+TG
Sbjct: 165 KILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
Query: 275 R 275
R
Sbjct: 220 R 220
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 111/241 (46%), Gaps = 44/241 (18%)
Query: 57 NKENTFTYRQLVAAT-----DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQ 111
++E YRQ + T + +++ + +G G +G+V +TG VAVK+L FQ
Sbjct: 22 SQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQ 80
Query: 112 G---EKEFLVEVLMLSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLED--------HL 160
K E+ +L M+H N++ L+ + P SLE+ HL
Sbjct: 81 SIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHL 128
Query: 161 LG-----LTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHP 215
+G + K D + + I RGL+Y+H+ AD +I+RDLK N+ + +
Sbjct: 129 MGADLNNIVKCQKLTDDHVQFLIYQ-ILRGLKYIHS-AD--IIHRDLKPSNLAVNEDCEL 184
Query: 216 KLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTG-KLTAKSDIFSFGVVLLELITG 274
K+ DFGLA+ +V+TR Y APE DI+S G ++ EL+TG
Sbjct: 185 KILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 239
Query: 275 R 275
R
Sbjct: 240 R 240
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 113/241 (46%), Gaps = 44/241 (18%)
Query: 57 NKENTFTYRQLVAAT-----DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQ 111
++E YRQ + T + +++ + +G G +G+V +TG VAVK+L FQ
Sbjct: 2 SQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQ 60
Query: 112 G---EKEFLVEVLMLSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLED--------HL 160
K E+ +L M+H N++ L+ + P SLE+ HL
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHL 108
Query: 161 LG-----LTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHP 215
+G + K D + + I RGL+Y+H+ AD +I+RDLK N+ + +
Sbjct: 109 MGADLNNIVKCQKLTDDHVQFLIYQ-ILRGLKYIHS-AD--IIHRDLKPSNLAVNEDCEL 164
Query: 216 KLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTGKLTAKS-DIFSFGVVLLELITG 274
K+ DFGLA+ +V+TR Y APE ++ DI+S G ++ EL+TG
Sbjct: 165 KILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTG 219
Query: 275 R 275
R
Sbjct: 220 R 220
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 96/216 (44%), Gaps = 20/216 (9%)
Query: 73 NFKDTNFLGQGGFGAVYKGKL-AETGQVV--AVKQL--DDTGFQGEKEFLVEVLMLSLMR 127
F LG+G FG+V + +L E G V AVK L D +EFL E +
Sbjct: 24 QFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFD 83
Query: 128 HPNLVHLIGYCAEGTQR------LLVYEYMPLGSLEDHLL----GLTPEMKPLDWNTRMK 177
HP++ L+G + +++ +M G L LL G P PL T ++
Sbjct: 84 HPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPL--QTLVR 141
Query: 178 IAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTR 237
A G+EYL ++ I+RDL A N +L + ++DFGL++ +GD
Sbjct: 142 FMVDIACGMEYLSSRN---FIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCA 198
Query: 238 VMGTHGYCAPEYATTGKLTAKSDIFSFGVVLLELIT 273
+ A E T SD+++FGV + E++T
Sbjct: 199 SKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMT 234
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 89/202 (44%), Gaps = 16/202 (7%)
Query: 80 LGQGGFGAVY--KGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLVHLIGY 137
LG G +G V + K+ + + + + + L EV +L L+ HPN++ L +
Sbjct: 45 LGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDF 104
Query: 138 CAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPV 197
+ LV E G L D ++ MK + + + I G+ YLH +
Sbjct: 105 FEDKRNYYLVMECYKGGELFDEII---HRMKFNEVDAAV-IIKQVLSGVTYLHKH---NI 157
Query: 198 IYRDLKAGNILLG---KGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTGK 254
++RDLK N+LL K K+ DFGL+ K +GT Y APE K
Sbjct: 158 VHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKM---KERLGTAYYIAPE-VLRKK 213
Query: 255 LTAKSDIFSFGVVLLELITGRP 276
K D++S GV+L L+ G P
Sbjct: 214 YDEKCDVWSIGVILFILLAGYP 235
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 107/229 (46%), Gaps = 29/229 (12%)
Query: 73 NFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQ-LDDTGFQGEKEFLVEVLMLSLMRHPNL 131
++ DT +G G FG VY+ KL ++G++VA+K+ L D F+ E+ ++ + H N+
Sbjct: 34 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-----ELQIMRKLDHCNI 88
Query: 132 VHLIGYCAEGTQRL------LVYEYMP--LGSLEDHLLGLTPEMKPLDWNTRMKIAAGAA 183
V L + ++ LV +Y+P + + H + + M
Sbjct: 89 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM---YQLF 145
Query: 184 RGLEYLHNKADPPVIYRDLKAGNILLGKGFHP-KLSDFGLAKFGPTGDK--SHVSTRVMG 240
R L Y+H+ + +RD+K N+LL KL DFG AK G+ S++ +R
Sbjct: 146 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-- 200
Query: 241 THGYCAPEYAT-TGKLTAKSDIFSFGVVLLELITGRPAMDDSQGHERML 288
Y APE T+ D++S G VL EL+ G+P G ++++
Sbjct: 201 ---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 246
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 107/229 (46%), Gaps = 29/229 (12%)
Query: 73 NFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQ-LDDTGFQGEKEFLVEVLMLSLMRHPNL 131
++ DT +G G FG VY+ KL ++G++VA+K+ L D F+ E+ ++ + H N+
Sbjct: 49 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-----ELQIMRKLDHCNI 103
Query: 132 VHLIGYCAEGTQRL------LVYEYMP--LGSLEDHLLGLTPEMKPLDWNTRMKIAAGAA 183
V L + ++ LV +Y+P + + H + + M
Sbjct: 104 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM---YQLF 160
Query: 184 RGLEYLHNKADPPVIYRDLKAGNILLGKGFHP-KLSDFGLAKFGPTGDK--SHVSTRVMG 240
R L Y+H+ + +RD+K N+LL KL DFG AK G+ S++ +R
Sbjct: 161 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-- 215
Query: 241 THGYCAPEYAT-TGKLTAKSDIFSFGVVLLELITGRPAMDDSQGHERML 288
Y APE T+ D++S G VL EL+ G+P G ++++
Sbjct: 216 ---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 261
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 107/229 (46%), Gaps = 29/229 (12%)
Query: 73 NFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQ-LDDTGFQGEKEFLVEVLMLSLMRHPNL 131
++ DT +G G FG VY+ KL ++G++VA+K+ L D F+ E+ ++ + H N+
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-----ELQIMRKLDHCNI 75
Query: 132 VHLIGYCAEGTQRL------LVYEYMP--LGSLEDHLLGLTPEMKPLDWNTRMKIAAGAA 183
V L + ++ LV +Y+P + + H + + M
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM---YQLF 132
Query: 184 RGLEYLHNKADPPVIYRDLKAGNILLGKGFHP-KLSDFGLAKFGPTGDK--SHVSTRVMG 240
R L Y+H+ + +RD+K N+LL KL DFG AK G+ S++ +R
Sbjct: 133 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-- 187
Query: 241 THGYCAPEYAT-TGKLTAKSDIFSFGVVLLELITGRPAMDDSQGHERML 288
Y APE T+ D++S G VL EL+ G+P G ++++
Sbjct: 188 ---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 233
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 92/210 (43%), Gaps = 9/210 (4%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDT--GFQGEKEFLVEVLMLSLMRHP 129
D ++ +G G +G V + TGQ VA+K++ + K L E+ +L +H
Sbjct: 55 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHD 114
Query: 130 NLVHLIGYCAEGTQR-LLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEY 188
N++ + Y+ L +E L + +PL RGL+Y
Sbjct: 115 NIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKY 174
Query: 189 LHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSH--VSTRVMGTHGYCA 246
+H+ VI+RDLK N+L+ + K+ DFG+A+ T H T + T Y A
Sbjct: 175 MHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRA 231
Query: 247 PEYA-TTGKLTAKSDIFSFGVVLLELITGR 275
PE + + T D++S G + E++ R
Sbjct: 232 PELMLSLHEYTQAIDLWSVGCIFGEMLARR 261
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 96/201 (47%), Gaps = 13/201 (6%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQ--LDDTGFQGEKEFLVEVLMLSLMRHPNLVHLIGY 137
+G+G +G V+K K ET ++VA+K+ LDD L E+ +L ++H N+V L
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 138 CAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPV 197
+ LV+E+ L+ + ++ P +GL + H++ V
Sbjct: 70 LHSDKKLTLVFEFCD-QDLKKYFDSCNGDLDP---EIVKSFLFQLLKGLGFCHSRN---V 122
Query: 198 IYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTGKLTA 257
++RDLK N+L+ + KL++FGLA+ G + + T Y P+ KL +
Sbjct: 123 LHRDLKPQNLLINRNGELKLANFGLAR--AFGIPVRCYSAEVVTLWYRPPDVLFGAKLYS 180
Query: 258 KS-DIFSFGVVLLELI-TGRP 276
S D++S G + EL GRP
Sbjct: 181 TSIDMWSAGCIFAELANAGRP 201
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 95/214 (44%), Gaps = 25/214 (11%)
Query: 78 NFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEV---------LMLSLMRH 128
+ +G+G V + TG AVK ++ T + E L EV ++ + H
Sbjct: 100 DVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGH 159
Query: 129 PNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEY 188
P+++ LI + LV++ M G L D+L T ++ + TR I + +
Sbjct: 160 PHIITLIDSYESSSFMFLVFDLMRKGELFDYL---TEKVALSEKETR-SIMRSLLEAVSF 215
Query: 189 LHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPE 248
LH +++RDLK NILL +LSDFG + G+K + GT GY APE
Sbjct: 216 LHANN---IVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLR---ELCGTPGYLAPE 269
Query: 249 Y------ATTGKLTAKSDIFSFGVVLLELITGRP 276
T + D+++ GV+L L+ G P
Sbjct: 270 ILKCSMDETHPGYGKEVDLWACGVILFTLLAGSP 303
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 92/217 (42%), Gaps = 25/217 (11%)
Query: 73 NFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQL---------DDTGFQGEKEFLVEVLML 123
+F +G+G + V +L +T ++ A++ + D Q EK +
Sbjct: 53 DFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQA--- 109
Query: 124 SLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAA 183
HP LV L ++ V EY+ G L H+ + L +A +
Sbjct: 110 --SNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHM----QRQRKLPEEHARFYSAEIS 163
Query: 184 RGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFG-PTGDKSHVSTRVMGTH 242
L YLH + +IYRDLK N+LL H KL+D+G+ K G GD ++ GT
Sbjct: 164 LALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD---TTSTFCGTP 217
Query: 243 GYCAPEYATTGKLTAKSDIFSFGVVLLELITGRPAMD 279
Y APE D ++ GV++ E++ GR D
Sbjct: 218 NYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 254
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 97/222 (43%), Gaps = 21/222 (9%)
Query: 71 TDNFKDTNFLGQGGFGAVYKGKLAETG-----QVVAVKQLDDTGFQGEKEFLVEVLMLSL 125
+DN+ LG+G F V + TG +++ K+L FQ + E +
Sbjct: 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQ---KLEREARICRK 84
Query: 126 MRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARG 185
++HPN+V L E + LV++ + G L + ++ + + +I A
Sbjct: 85 LQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIA-- 142
Query: 186 LEYLHNKADPPVIYRDLKAGNILLG---KGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTH 242
Y H+ +++R+LK N+LL KG KL+DFGLA + H GT
Sbjct: 143 --YCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH---GFAGTP 194
Query: 243 GYCAPEYATTGKLTAKSDIFSFGVVLLELITGRPAMDDSQGH 284
GY +PE + DI++ GV+L L+ G P D H
Sbjct: 195 GYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH 236
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 113/241 (46%), Gaps = 44/241 (18%)
Query: 57 NKENTFTYRQLVAAT-----DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQ 111
++E YRQ + T + +++ + +G G +G+V +TG VAVK+L FQ
Sbjct: 7 SQERPTFYRQELNKTIWEVPERYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQ 65
Query: 112 G---EKEFLVEVLMLSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLED--------HL 160
K E+ +L M+H N++ L+ + P SLE+ HL
Sbjct: 66 SIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHL 113
Query: 161 LG-----LTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHP 215
+G + K D + + I RGL+Y+H+ AD +I+RDLK N+ + +
Sbjct: 114 MGADLNNIVKCQKLTDDHVQFLIYQ-ILRGLKYIHS-AD--IIHRDLKPSNLAVNEDXEL 169
Query: 216 KLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTGKLTAKS-DIFSFGVVLLELITG 274
K+ DFGLA+ +V+TR Y APE ++ DI+S G ++ EL+TG
Sbjct: 170 KILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 224
Query: 275 R 275
R
Sbjct: 225 R 225
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 95/201 (47%), Gaps = 13/201 (6%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQ--LDDTGFQGEKEFLVEVLMLSLMRHPNLVHLIGY 137
+G+G +G V+K K ET ++VA+K+ LDD L E+ +L ++H N+V L
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 138 CAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPV 197
+ LV+E+ L+ + ++ P +GL + H++ V
Sbjct: 70 LHSDKKLTLVFEFCD-QDLKKYFDSCNGDLDP---EIVKSFLFQLLKGLGFCHSRN---V 122
Query: 198 IYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTGKLTA 257
++RDLK N+L+ + KL+DFGLA+ G + + T Y P+ KL +
Sbjct: 123 LHRDLKPQNLLINRNGELKLADFGLAR--AFGIPVRCYSAEVVTLWYRPPDVLFGAKLYS 180
Query: 258 KS-DIFSFGVVLLELI-TGRP 276
S D++S G + EL RP
Sbjct: 181 TSIDMWSAGCIFAELANAARP 201
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 97/211 (45%), Gaps = 12/211 (5%)
Query: 71 TDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSL--MRH 128
D+ + LG+G +G V K + +GQ++AVK++ T E++ L+ L +S+ +
Sbjct: 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDC 65
Query: 129 PNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEY 188
P V G + E M SL+ + + + + + KIA + LE+
Sbjct: 66 PFTVTFYGALFREGDVWICMELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEH 124
Query: 189 LHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPE 248
LH+K VI+RD+K N+L+ K+ DFG++ + + G Y APE
Sbjct: 125 LHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDA---GCKPYMAPE 179
Query: 249 YA----TTGKLTAKSDIFSFGVVLLELITGR 275
+ KSDI+S G+ ++EL R
Sbjct: 180 RINPELNQKGYSVKSDIWSLGITMIELAILR 210
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 110/234 (47%), Gaps = 44/234 (18%)
Query: 64 YRQLVAAT-----DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQG---EKE 115
YRQ + T + +++ + +G G +G+V +TG VAVK+L FQ K
Sbjct: 5 YRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQSIIHAKR 63
Query: 116 FLVEVLMLSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLED--------HLLG----- 162
E+ +L M+H N++ L+ + P SLE+ HL+G
Sbjct: 64 TYRELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNN 111
Query: 163 LTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGL 222
+ K D + + I RGL+Y+H+ AD +I+RDLK N+ + + K+ DFGL
Sbjct: 112 IVKCQKLTDDHVQFLIYQ-ILRGLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGL 167
Query: 223 AKFGPTGDKSHVSTRVMGTHGYCAPEYATTGKLTAKS-DIFSFGVVLLELITGR 275
A+ +V+TR Y APE ++ DI+S G ++ EL+TGR
Sbjct: 168 ARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 107/229 (46%), Gaps = 29/229 (12%)
Query: 73 NFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQ-LDDTGFQGEKEFLVEVLMLSLMRHPNL 131
++ DT +G G FG VY+ KL ++G++VA+K+ L D F+ E+ ++ + H N+
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-----ELQIMRKLDHCNI 109
Query: 132 VHLIGYCAEGTQRL------LVYEYMP--LGSLEDHLLGLTPEMKPLDWNTRMKIAAGAA 183
V L + ++ LV +Y+P + + H + + M
Sbjct: 110 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM---YQLF 166
Query: 184 RGLEYLHNKADPPVIYRDLKAGNILLGKGFHP-KLSDFGLAKFGPTGDK--SHVSTRVMG 240
R L Y+H+ + +RD+K N+LL KL DFG AK G+ S++ +R
Sbjct: 167 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-- 221
Query: 241 THGYCAPEYAT-TGKLTAKSDIFSFGVVLLELITGRPAMDDSQGHERML 288
Y APE T+ D++S G VL EL+ G+P G ++++
Sbjct: 222 ---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 267
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 113/241 (46%), Gaps = 44/241 (18%)
Query: 57 NKENTFTYRQLVAAT-----DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQ 111
++E YRQ + T + +++ + +G G +G+V +TG VAVK+L FQ
Sbjct: 9 SQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQ 67
Query: 112 G---EKEFLVEVLMLSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLED--------HL 160
K E+ +L M+H N++ L+ + P SLE+ HL
Sbjct: 68 SIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHL 115
Query: 161 LG-----LTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHP 215
+G + K D + + I RGL+Y+H+ AD +I+RDLK N+ + +
Sbjct: 116 MGADLNNIVKCQKLTDDHVQFLIYQ-ILRGLKYIHS-AD--IIHRDLKPSNLAVNEDCEL 171
Query: 216 KLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTGKLTAKS-DIFSFGVVLLELITG 274
K+ DFGLA+ +V+TR Y APE ++ DI+S G ++ EL+TG
Sbjct: 172 KILDFGLARHTADEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 226
Query: 275 R 275
R
Sbjct: 227 R 227
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 113/241 (46%), Gaps = 44/241 (18%)
Query: 57 NKENTFTYRQLVAAT-----DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQ 111
++E YRQ + T + +++ + +G G +G+V +TG VAVK+L FQ
Sbjct: 9 SQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQ 67
Query: 112 G---EKEFLVEVLMLSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLED--------HL 160
K E+ +L M+H N++ L+ + P SLE+ HL
Sbjct: 68 SIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHL 115
Query: 161 LG-----LTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHP 215
+G + K D + + I RGL+Y+H+ AD +I+RDLK N+ + +
Sbjct: 116 MGADLNNIVKCQKLTDDHVQFLIYQ-ILRGLKYIHS-AD--IIHRDLKPSNLAVNEDCEL 171
Query: 216 KLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTGKLTAKS-DIFSFGVVLLELITG 274
K+ DFGLA+ +V+TR Y APE ++ DI+S G ++ EL+TG
Sbjct: 172 KILDFGLARHTADEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 226
Query: 275 R 275
R
Sbjct: 227 R 227
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 113/241 (46%), Gaps = 44/241 (18%)
Query: 57 NKENTFTYRQLVAAT-----DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQ 111
++E YRQ + T + +++ + +G G +G+V +TG VAVK+L FQ
Sbjct: 9 SQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQ 67
Query: 112 G---EKEFLVEVLMLSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLED--------HL 160
K E+ +L M+H N++ L+ + P SLE+ HL
Sbjct: 68 SIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHL 115
Query: 161 LG-----LTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHP 215
+G + K D + + I RGL+Y+H+ AD +I+RDLK N+ + +
Sbjct: 116 MGADLNNIVKCQKLTDDHVQFLIYQ-ILRGLKYIHS-AD--IIHRDLKPSNLAVNEDCEL 171
Query: 216 KLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTGKLTAKS-DIFSFGVVLLELITG 274
K+ DFGLA+ +V+TR Y APE ++ DI+S G ++ EL+TG
Sbjct: 172 KILDFGLARHTADEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 226
Query: 275 R 275
R
Sbjct: 227 R 227
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 102/212 (48%), Gaps = 15/212 (7%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEK-EFLVEVLMLSLMRHPNLVHLIGYC 138
LG+G + VYKGK T +VA+K++ +G + EV +L ++H N+V L
Sbjct: 10 LGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDII 69
Query: 139 AEGTQRLLVYEYMPLGSLEDHL--LGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPP 196
LV+EY+ L+ +L G M N ++ + RGL Y H +
Sbjct: 70 HTEKSLTLVFEYLD-KDLKQYLDDCGNIINMH----NVKLFLFQ-LLRGLAYCHRQK--- 120
Query: 197 VIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYAT-TGKL 255
V++RDLK N+L+ + KL+DFGLA+ K++ + V T Y P+ +
Sbjct: 121 VLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVV--TLWYRPPDILLGSTDY 178
Query: 256 TAKSDIFSFGVVLLELITGRPAMDDSQGHERM 287
+ + D++ G + E+ TGRP S E++
Sbjct: 179 STQIDMWGVGCIFYEMATGRPLFPGSTVEEQL 210
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 107/229 (46%), Gaps = 29/229 (12%)
Query: 73 NFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQ-LDDTGFQGEKEFLVEVLMLSLMRHPNL 131
++ DT +G G FG VY+ KL ++G++VA+K+ L D F+ E+ ++ + H N+
Sbjct: 57 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-----ELQIMRKLDHCNI 111
Query: 132 VHLIGYCAEGTQRL------LVYEYMP--LGSLEDHLLGLTPEMKPLDWNTRMKIAAGAA 183
V L + ++ LV +Y+P + + H + + M
Sbjct: 112 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM---YQLF 168
Query: 184 RGLEYLHNKADPPVIYRDLKAGNILLGKGFHP-KLSDFGLAKFGPTGDK--SHVSTRVMG 240
R L Y+H+ + +RD+K N+LL KL DFG AK G+ S++ +R
Sbjct: 169 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-- 223
Query: 241 THGYCAPEYAT-TGKLTAKSDIFSFGVVLLELITGRPAMDDSQGHERML 288
Y APE T+ D++S G VL EL+ G+P G ++++
Sbjct: 224 ---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 269
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 92/210 (43%), Gaps = 9/210 (4%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDT--GFQGEKEFLVEVLMLSLMRHP 129
D ++ +G G +G V + TGQ VA+K++ + K L E+ +L +H
Sbjct: 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHD 113
Query: 130 NLVHLIGYCAEGTQR-LLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEY 188
N++ + Y+ L +E L + +PL RGL+Y
Sbjct: 114 NIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKY 173
Query: 189 LHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSH--VSTRVMGTHGYCA 246
+H+ VI+RDLK N+L+ + K+ DFG+A+ T H T + T Y A
Sbjct: 174 MHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRA 230
Query: 247 PEYA-TTGKLTAKSDIFSFGVVLLELITGR 275
PE + + T D++S G + E++ R
Sbjct: 231 PELMLSLHEYTQAIDLWSVGCIFGEMLARR 260
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 107/229 (46%), Gaps = 29/229 (12%)
Query: 73 NFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQ-LDDTGFQGEKEFLVEVLMLSLMRHPNL 131
++ DT +G G FG VY+ KL ++G++VA+K+ L D F+ E+ ++ + H N+
Sbjct: 26 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-----ELQIMRKLDHCNI 80
Query: 132 VHLIGYCAEGTQRL------LVYEYMP--LGSLEDHLLGLTPEMKPLDWNTRMKIAAGAA 183
V L + ++ LV +Y+P + + H + + M
Sbjct: 81 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY---QLF 137
Query: 184 RGLEYLHNKADPPVIYRDLKAGNILLGKGFHP-KLSDFGLAKFGPTGDK--SHVSTRVMG 240
R L Y+H+ + +RD+K N+LL KL DFG AK G+ S++ +R
Sbjct: 138 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-- 192
Query: 241 THGYCAPEYAT-TGKLTAKSDIFSFGVVLLELITGRPAMDDSQGHERML 288
Y APE T+ D++S G VL EL+ G+P G ++++
Sbjct: 193 ---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 238
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 111/241 (46%), Gaps = 44/241 (18%)
Query: 57 NKENTFTYRQLVAAT-----DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQ 111
++E YRQ + T + +++ + +G G +G+V +TG VAVK+L FQ
Sbjct: 2 SQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQ 60
Query: 112 G---EKEFLVEVLMLSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLED--------HL 160
K E+ +L M+H N++ L+ + P SLE+ HL
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHL 108
Query: 161 LG-----LTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHP 215
+G + K D + + I RGL+Y+H+ AD +I+RDLK N+ + +
Sbjct: 109 MGADLNNIVKCQKLTDDHVQFLIYQ-ILRGLKYIHS-AD--IIHRDLKPSNLAVNEDCEL 164
Query: 216 KLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTG-KLTAKSDIFSFGVVLLELITG 274
K+ DFGLA+ +V+TR Y APE DI+S G ++ EL+TG
Sbjct: 165 KILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
Query: 275 R 275
R
Sbjct: 220 R 220
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 111/241 (46%), Gaps = 44/241 (18%)
Query: 57 NKENTFTYRQLVAAT-----DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQ 111
++E YRQ + T + +++ + +G G +G+V +TG VAVK+L FQ
Sbjct: 7 SQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQ 65
Query: 112 G---EKEFLVEVLMLSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLED--------HL 160
K E+ +L M+H N++ L+ + P SLE+ HL
Sbjct: 66 SIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHL 113
Query: 161 LG-----LTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHP 215
+G + K D + + I RGL+Y+H+ AD +I+RDLK N+ + +
Sbjct: 114 MGADLNNIVKCQKLTDDHVQFLIYQ-ILRGLKYIHS-AD--IIHRDLKPSNLAVNEDXEL 169
Query: 216 KLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTG-KLTAKSDIFSFGVVLLELITG 274
K+ DFGLA+ +V+TR Y APE DI+S G ++ EL+TG
Sbjct: 170 KILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 224
Query: 275 R 275
R
Sbjct: 225 R 225
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 107/229 (46%), Gaps = 29/229 (12%)
Query: 73 NFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQ-LDDTGFQGEKEFLVEVLMLSLMRHPNL 131
++ DT +G G FG VY+ KL ++G++VA+K+ L D F+ E+ ++ + H N+
Sbjct: 59 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-----ELQIMRKLDHCNI 113
Query: 132 VHLIGYCAEGTQRL------LVYEYMP--LGSLEDHLLGLTPEMKPLDWNTRMKIAAGAA 183
V L + ++ LV +Y+P + + H + + M
Sbjct: 114 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM---YQLF 170
Query: 184 RGLEYLHNKADPPVIYRDLKAGNILLGKGFHP-KLSDFGLAKFGPTGDK--SHVSTRVMG 240
R L Y+H+ + +RD+K N+LL KL DFG AK G+ S++ +R
Sbjct: 171 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-- 225
Query: 241 THGYCAPEYAT-TGKLTAKSDIFSFGVVLLELITGRPAMDDSQGHERML 288
Y APE T+ D++S G VL EL+ G+P G ++++
Sbjct: 226 ---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 271
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 105/227 (46%), Gaps = 25/227 (11%)
Query: 73 NFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQ-LDDTGFQGEKEFLVEVLMLSLMRHPNL 131
++ DT +G G FG VY+ KL ++G++VA+K+ L D F+ E+ ++ + H N+
Sbjct: 40 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-----ELQIMRKLDHCNI 94
Query: 132 VHLIGYCAEGTQRL------LVYEYMP--LGSLEDHLLGLTPEMKPLDWNTRMKIAAGAA 183
V L + ++ LV +Y+P + + H + + M
Sbjct: 95 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM---YQLF 151
Query: 184 RGLEYLHNKADPPVIYRDLKAGNILLGKGFHP-KLSDFGLAKFGPTGDKSHVSTRVMGTH 242
R L Y+H+ + +RD+K N+LL KL DFG AK G+ + + +
Sbjct: 152 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSR 205
Query: 243 GYCAPEYAT-TGKLTAKSDIFSFGVVLLELITGRPAMDDSQGHERML 288
Y APE T+ D++S G VL EL+ G+P G ++++
Sbjct: 206 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 252
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 105/227 (46%), Gaps = 25/227 (11%)
Query: 73 NFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQ-LDDTGFQGEKEFLVEVLMLSLMRHPNL 131
++ DT +G G FG VY+ KL ++G++VA+K+ L D F+ E+ ++ + H N+
Sbjct: 29 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-----ELQIMRKLDHCNI 83
Query: 132 VHLIGYCAEGTQRL------LVYEYMP--LGSLEDHLLGLTPEMKPLDWNTRMKIAAGAA 183
V L + ++ LV +Y+P + + H + + M
Sbjct: 84 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM---YQLF 140
Query: 184 RGLEYLHNKADPPVIYRDLKAGNILLGKGFHP-KLSDFGLAKFGPTGDKSHVSTRVMGTH 242
R L Y+H+ + +RD+K N+LL KL DFG AK G+ + + +
Sbjct: 141 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSR 194
Query: 243 GYCAPEYAT-TGKLTAKSDIFSFGVVLLELITGRPAMDDSQGHERML 288
Y APE T+ D++S G VL EL+ G+P G ++++
Sbjct: 195 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 241
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 110/241 (45%), Gaps = 44/241 (18%)
Query: 57 NKENTFTYRQLVAAT-----DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQ 111
++E YRQ + T + +++ +G G +G+V +TG VAVK+L FQ
Sbjct: 12 SQERPTFYRQELNKTIWEVPERYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQ 70
Query: 112 G---EKEFLVEVLMLSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLED--------HL 160
K E+ +L M+H N++ L+ + P SLE+ HL
Sbjct: 71 SIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHL 118
Query: 161 LG-----LTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHP 215
+G + K D + + I RGL+Y+H+ AD +I+RDLK N+ + +
Sbjct: 119 MGADLNNIVKCQKLTDDHVQFLIYQ-ILRGLKYIHS-AD--IIHRDLKPSNLAVNEDCEL 174
Query: 216 KLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTG-KLTAKSDIFSFGVVLLELITG 274
K+ DFGLA+ +V+TR Y APE DI+S G ++ EL+TG
Sbjct: 175 KILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 229
Query: 275 R 275
R
Sbjct: 230 R 230
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 111/241 (46%), Gaps = 44/241 (18%)
Query: 57 NKENTFTYRQLVAAT-----DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQ 111
++E YRQ + T + +++ + +G G +G+V +TG VAVK+L FQ
Sbjct: 14 SQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-KPFQ 72
Query: 112 G---EKEFLVEVLMLSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLED--------HL 160
K E+ +L M+H N++ L+ + P SLE+ HL
Sbjct: 73 SIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHL 120
Query: 161 LG-----LTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHP 215
+G + K D + + I RGL+Y+H+ AD +I+RDLK N+ + +
Sbjct: 121 MGADLNNIVKCQKLTDDHVQFLIYQ-ILRGLKYIHS-AD--IIHRDLKPSNLAVNEDCEL 176
Query: 216 KLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTG-KLTAKSDIFSFGVVLLELITG 274
K+ DFGLA+ +V+TR Y APE DI+S G ++ EL+TG
Sbjct: 177 KILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 231
Query: 275 R 275
R
Sbjct: 232 R 232
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 111/241 (46%), Gaps = 44/241 (18%)
Query: 57 NKENTFTYRQLVAAT-----DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQ 111
++E YRQ + T + +++ + +G G +G+V +TG VAVK+L FQ
Sbjct: 14 SQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQ 72
Query: 112 G---EKEFLVEVLMLSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLED--------HL 160
K E+ +L M+H N++ L+ + P SLE+ HL
Sbjct: 73 SIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHL 120
Query: 161 LG-----LTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHP 215
+G + K D + + I RGL+Y+H+ AD +I+RDLK N+ + +
Sbjct: 121 MGADLNNIVKCQKLTDDHVQFLIYQ-ILRGLKYIHS-AD--IIHRDLKPSNLAVNEDCEL 176
Query: 216 KLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTG-KLTAKSDIFSFGVVLLELITG 274
K+ DFGLA+ +V+TR Y APE DI+S G ++ EL+TG
Sbjct: 177 KILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 231
Query: 275 R 275
R
Sbjct: 232 R 232
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 111/241 (46%), Gaps = 44/241 (18%)
Query: 57 NKENTFTYRQLVAAT-----DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQ 111
++E YRQ + T + +++ + +G G +G+V +TG VAVK+L FQ
Sbjct: 14 SQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQ 72
Query: 112 G---EKEFLVEVLMLSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLED--------HL 160
K E+ +L M+H N++ L+ + P SLE+ HL
Sbjct: 73 SIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHL 120
Query: 161 LG-----LTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHP 215
+G + K D + + I RGL+Y+H+ AD +I+RDLK N+ + +
Sbjct: 121 MGADLNNIVKCQKLTDDHVQFLIYQ-ILRGLKYIHS-AD--IIHRDLKPSNLAVNEDCEL 176
Query: 216 KLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTG-KLTAKSDIFSFGVVLLELITG 274
K+ DFGLA+ +V+TR Y APE DI+S G ++ EL+TG
Sbjct: 177 KILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 231
Query: 275 R 275
R
Sbjct: 232 R 232
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 113/241 (46%), Gaps = 44/241 (18%)
Query: 57 NKENTFTYRQLVAAT-----DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQ 111
++E YRQ + T + +++ + +G G +G+V +TG VAVK+L FQ
Sbjct: 2 SQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQ 60
Query: 112 G---EKEFLVEVLMLSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLED--------HL 160
K E+ +L M+H N++ L+ + P SLE+ HL
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHL 108
Query: 161 LG-----LTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHP 215
+G + K D + + I RGL+Y+H+ AD +I+RDLK N+ + +
Sbjct: 109 MGADLNNIVKCQKLTDDHVQFLIYQ-ILRGLKYIHS-AD--IIHRDLKPSNLAVNEDCEL 164
Query: 216 KLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTGKLTAKS-DIFSFGVVLLELITG 274
K+ DFGLA+ +V+TR Y APE ++ DI+S G ++ EL+TG
Sbjct: 165 KILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
Query: 275 R 275
R
Sbjct: 220 R 220
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 111/241 (46%), Gaps = 44/241 (18%)
Query: 57 NKENTFTYRQLVAAT-----DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQ 111
++E YRQ + T + +++ + +G G +G+V +TG VAVK+L FQ
Sbjct: 8 SQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQ 66
Query: 112 G---EKEFLVEVLMLSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLED--------HL 160
K E+ +L M+H N++ L+ + P SLE+ HL
Sbjct: 67 SIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHL 114
Query: 161 LG-----LTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHP 215
+G + K D + + I RGL+Y+H+ AD +I+RDLK N+ + +
Sbjct: 115 MGADLNNIVKCQKLTDDHVQFLIYQ-ILRGLKYIHS-AD--IIHRDLKPSNLAVNEDCEL 170
Query: 216 KLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTG-KLTAKSDIFSFGVVLLELITG 274
K+ DFGLA+ +V+TR Y APE DI+S G ++ EL+TG
Sbjct: 171 KILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 225
Query: 275 R 275
R
Sbjct: 226 R 226
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 111/241 (46%), Gaps = 44/241 (18%)
Query: 57 NKENTFTYRQLVAAT-----DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQ 111
++E YRQ + T + +++ + +G G +G+V +TG VAVK+L FQ
Sbjct: 2 SQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQ 60
Query: 112 G---EKEFLVEVLMLSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLED--------HL 160
K E+ +L M+H N++ L+ + P SLE+ HL
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHL 108
Query: 161 LG-----LTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHP 215
+G + K D + + I RGL+Y+H+ AD +I+RDLK N+ + +
Sbjct: 109 MGADLNNIVKCQKLTDDHVQFLIYQ-ILRGLKYIHS-AD--IIHRDLKPSNLAVNEDCEL 164
Query: 216 KLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTG-KLTAKSDIFSFGVVLLELITG 274
K+ DFGLA+ +V+TR Y APE DI+S G ++ EL+TG
Sbjct: 165 KILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
Query: 275 R 275
R
Sbjct: 220 R 220
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 100/224 (44%), Gaps = 18/224 (8%)
Query: 65 RQLVAATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLD--DTGFQGEKEFLVEVLM 122
R + + +F+ + LG+G +G V TG++VA+K+++ D + L E+ +
Sbjct: 4 RIVYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRT-LREIKI 62
Query: 123 LSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGA 182
L +H N++ + + Y+ ++ L + D + + I
Sbjct: 63 LKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQ-T 121
Query: 183 ARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKF---------GPTGDKSH 233
R ++ LH VI+RDLK N+L+ K+ DFGLA+ PTG +S
Sbjct: 122 LRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSG 178
Query: 234 VSTRVMGTHGYCAPEYA-TTGKLTAKSDIFSFGVVLLELITGRP 276
+ + T Y APE T+ K + D++S G +L EL RP
Sbjct: 179 M-VEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRP 221
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 111/241 (46%), Gaps = 44/241 (18%)
Query: 57 NKENTFTYRQLVAAT-----DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQ 111
++E YRQ + T + +++ + +G G +G+V +TG VAVK+L FQ
Sbjct: 2 SQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQ 60
Query: 112 G---EKEFLVEVLMLSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLED--------HL 160
K E+ +L M+H N++ L+ + P SLE+ HL
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHL 108
Query: 161 LG-----LTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHP 215
+G + K D + + I RGL+Y+H+ AD +I+RDLK N+ + +
Sbjct: 109 MGADLNNIVKCQKLTDDHVQFLIYQ-ILRGLKYIHS-AD--IIHRDLKPSNLAVNEDCEL 164
Query: 216 KLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTG-KLTAKSDIFSFGVVLLELITG 274
K+ DFGLA+ +V+TR Y APE DI+S G ++ EL+TG
Sbjct: 165 KILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
Query: 275 R 275
R
Sbjct: 220 R 220
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 97/212 (45%), Gaps = 31/212 (14%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQL---DDTGFQGEKEFLVEVLMLSLMRHPNLVHLIG 136
+G+G +G V++G G+ VAVK D+ + E E VL+ RH N++ I
Sbjct: 16 VGKGRYGEVWRGLWH--GESVAVKIFSSRDEQSWFRETEIYNTVLL----RHDNILGFIA 69
Query: 137 YCA----EGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLH-- 190
TQ L+ Y GSL D L + + L+ + +++A AA GL +LH
Sbjct: 70 SDMTSRNSSTQLWLITHYHEHGSLYDFL-----QRQTLEPHLALRLAVSAACGLAHLHVE 124
Query: 191 ---NKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTG-DKSHVSTR-VMGTHGYC 245
+ P + +RD K+ N+L+ ++D GLA G D + +GT Y
Sbjct: 125 IFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYM 184
Query: 246 APEYATTGKLT------AKSDIFSFGVVLLEL 271
APE T +DI++FG+VL E+
Sbjct: 185 APEVLDEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 111/241 (46%), Gaps = 44/241 (18%)
Query: 57 NKENTFTYRQLVAAT-----DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQ 111
++E YRQ + T + +++ + +G G +G+V +TG VAVK+L FQ
Sbjct: 4 SQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQ 62
Query: 112 G---EKEFLVEVLMLSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLED--------HL 160
K E+ +L M+H N++ L+ + P SLE+ HL
Sbjct: 63 SIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHL 110
Query: 161 LG-----LTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHP 215
+G + K D + + I RGL+Y+H+ AD +I+RDLK N+ + +
Sbjct: 111 MGADLNNIVKCQKLTDDHVQFLIYQ-ILRGLKYIHS-AD--IIHRDLKPSNLAVNEDCEL 166
Query: 216 KLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTG-KLTAKSDIFSFGVVLLELITG 274
K+ DFGLA+ +V+TR Y APE DI+S G ++ EL+TG
Sbjct: 167 KILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 221
Query: 275 R 275
R
Sbjct: 222 R 222
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 113/241 (46%), Gaps = 44/241 (18%)
Query: 57 NKENTFTYRQLVAAT-----DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQ 111
++E YRQ + T + +++ + +G G +G+V +TG VAVK+L FQ
Sbjct: 9 SQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQ 67
Query: 112 G---EKEFLVEVLMLSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLED--------HL 160
K E+ +L M+H N++ L+ + P SLE+ HL
Sbjct: 68 SIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHL 115
Query: 161 LG-----LTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHP 215
+G + K D + + I RGL+Y+H+ AD +I+RDLK N+ + +
Sbjct: 116 MGADLNNIVKCQKLTDDHVQFLIYQ-ILRGLKYIHS-AD--IIHRDLKPSNLAVNEDCEL 171
Query: 216 KLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTGKLTAKS-DIFSFGVVLLELITG 274
K+ DFGLA+ +V+TR Y APE ++ DI+S G ++ EL+TG
Sbjct: 172 KILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 226
Query: 275 R 275
R
Sbjct: 227 R 227
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 111/241 (46%), Gaps = 44/241 (18%)
Query: 57 NKENTFTYRQLVAAT-----DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQ 111
++E YRQ + T + +++ + +G G +G+V +TG VAVK+L FQ
Sbjct: 2 SQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQ 60
Query: 112 G---EKEFLVEVLMLSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLED--------HL 160
K E+ +L M+H N++ L+ + P SLE+ HL
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHL 108
Query: 161 LG-----LTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHP 215
+G + K D + + I RGL+Y+H+ AD +I+RDLK N+ + +
Sbjct: 109 MGADLNNIVKCQKLTDDHVQFLIYQ-ILRGLKYIHS-AD--IIHRDLKPSNLAVNEDCEL 164
Query: 216 KLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTG-KLTAKSDIFSFGVVLLELITG 274
K+ DFGLA+ +V+TR Y APE DI+S G ++ EL+TG
Sbjct: 165 KILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
Query: 275 R 275
R
Sbjct: 220 R 220
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 105/227 (46%), Gaps = 25/227 (11%)
Query: 73 NFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQ-LDDTGFQGEKEFLVEVLMLSLMRHPNL 131
++ DT +G G FG VY+ KL ++G++VA+K+ L D F+ E+ ++ + H N+
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-----ELQIMRKLDHCNI 87
Query: 132 VHLIGYCAEGTQRL------LVYEYMP--LGSLEDHLLGLTPEMKPLDWNTRMKIAAGAA 183
V L + ++ LV +Y+P + + H + + M
Sbjct: 88 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM---YQLF 144
Query: 184 RGLEYLHNKADPPVIYRDLKAGNILLGKGFHP-KLSDFGLAKFGPTGDKSHVSTRVMGTH 242
R L Y+H+ + +RD+K N+LL KL DFG AK G+ + + +
Sbjct: 145 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSR 198
Query: 243 GYCAPEYAT-TGKLTAKSDIFSFGVVLLELITGRPAMDDSQGHERML 288
Y APE T+ D++S G VL EL+ G+P G ++++
Sbjct: 199 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 245
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 105/227 (46%), Gaps = 25/227 (11%)
Query: 73 NFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQ-LDDTGFQGEKEFLVEVLMLSLMRHPNL 131
++ DT +G G FG VY+ KL ++G++VA+K+ L D F+ E+ ++ + H N+
Sbjct: 22 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-----ELQIMRKLDHCNI 76
Query: 132 VHLIGYCAEGTQRL------LVYEYMP--LGSLEDHLLGLTPEMKPLDWNTRMKIAAGAA 183
V L + ++ LV +Y+P + + H + + M
Sbjct: 77 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM---YQLF 133
Query: 184 RGLEYLHNKADPPVIYRDLKAGNILLGKGFHP-KLSDFGLAKFGPTGDKSHVSTRVMGTH 242
R L Y+H+ + +RD+K N+LL KL DFG AK G+ + + +
Sbjct: 134 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSR 187
Query: 243 GYCAPEYAT-TGKLTAKSDIFSFGVVLLELITGRPAMDDSQGHERML 288
Y APE T+ D++S G VL EL+ G+P G ++++
Sbjct: 188 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 234
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 98/222 (44%), Gaps = 21/222 (9%)
Query: 63 TYRQLVAATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEK------EF 116
T+RQ D+++ LG G F V K + TG+ A K + + E
Sbjct: 4 TFRQ-EDVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEI 62
Query: 117 LVEVLMLSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRM 176
EV +L +RHPN++ L T +L+ E + G L D L E + L +
Sbjct: 63 EREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFL----AEKESLTEDEAT 118
Query: 177 KIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHP----KLSDFGLAKFGPTGDKS 232
+ G+ YLH+K + + DLK NI+L P KL DFG+A G++
Sbjct: 119 QFLKQILDGVHYLHSKR---IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF 175
Query: 233 HVSTRVMGTHGYCAPEYATTGKLTAKSDIFSFGVVLLELITG 274
+ GT + APE L ++D++S GV+ L++G
Sbjct: 176 ---KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 111/241 (46%), Gaps = 44/241 (18%)
Query: 57 NKENTFTYRQLVAAT-----DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQ 111
++E YRQ + T + +++ + +G G +G+V +TG VAVK+L FQ
Sbjct: 4 SQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQ 62
Query: 112 G---EKEFLVEVLMLSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLED--------HL 160
K E+ +L M+H N++ L+ + P SLE+ HL
Sbjct: 63 SIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHL 110
Query: 161 LG-----LTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHP 215
+G + K D + + I RGL+Y+H+ AD +I+RDLK N+ + +
Sbjct: 111 MGADLNNIVKCQKLTDDHVQFLIYQ-ILRGLKYIHS-AD--IIHRDLKPSNLAVNEDCEL 166
Query: 216 KLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTG-KLTAKSDIFSFGVVLLELITG 274
K+ DFGLA+ +V+TR Y APE DI+S G ++ EL+TG
Sbjct: 167 KILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 221
Query: 275 R 275
R
Sbjct: 222 R 222
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 105/227 (46%), Gaps = 25/227 (11%)
Query: 73 NFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQ-LDDTGFQGEKEFLVEVLMLSLMRHPNL 131
++ DT +G G FG VY+ KL ++G++VA+K+ L D F+ E+ ++ + H N+
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-----ELQIMRKLDHCNI 75
Query: 132 VHLIGYCAEGTQRL------LVYEYMP--LGSLEDHLLGLTPEMKPLDWNTRMKIAAGAA 183
V L + ++ LV +Y+P + + H + + M
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM---YQLF 132
Query: 184 RGLEYLHNKADPPVIYRDLKAGNILLGKGFHP-KLSDFGLAKFGPTGDKSHVSTRVMGTH 242
R L Y+H+ + +RD+K N+LL KL DFG AK G+ + + +
Sbjct: 133 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSR 186
Query: 243 GYCAPEYAT-TGKLTAKSDIFSFGVVLLELITGRPAMDDSQGHERML 288
Y APE T+ D++S G VL EL+ G+P G ++++
Sbjct: 187 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 233
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 113/241 (46%), Gaps = 44/241 (18%)
Query: 57 NKENTFTYRQLVAAT-----DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQ 111
++E YRQ + T + +++ + +G G +G+V +TG VAVK+L FQ
Sbjct: 7 SQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQ 65
Query: 112 G---EKEFLVEVLMLSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLED--------HL 160
K E+ +L M+H N++ L+ + P SLE+ HL
Sbjct: 66 SIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHL 113
Query: 161 LG-----LTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHP 215
+G + K D + + I RGL+Y+H+ AD +I+RDLK N+ + +
Sbjct: 114 MGADLNNIVKCQKLTDDHVQFLIYQ-ILRGLKYIHS-AD--IIHRDLKPSNLAVNEDCEL 169
Query: 216 KLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTGKLTAKS-DIFSFGVVLLELITG 274
K+ DFGLA+ +V+TR Y APE ++ DI+S G ++ EL+TG
Sbjct: 170 KILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 224
Query: 275 R 275
R
Sbjct: 225 R 225
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 110/241 (45%), Gaps = 44/241 (18%)
Query: 57 NKENTFTYRQLVAAT-----DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQ 111
+KE YRQ + T + ++ + +G G +G+V ++G +AVK+L FQ
Sbjct: 31 HKERPTFYRQELNKTIWEVPERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLS-RPFQ 89
Query: 112 G---EKEFLVEVLMLSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLED--------HL 160
K E+ +L M+H N++ L+ + P SLE+ HL
Sbjct: 90 SIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTPATSLEEFNDVYLVTHL 137
Query: 161 LG-----LTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHP 215
+G + K D + + I RGL+Y+H+ AD +I+RDLK N+ + +
Sbjct: 138 MGADLNNIVKCQKLTDDHVQFLIYQ-ILRGLKYIHS-AD--IIHRDLKPSNLAVNEDCEL 193
Query: 216 KLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTG-KLTAKSDIFSFGVVLLELITG 274
K+ DFGLA+ +V+TR Y APE DI+S G ++ EL+TG
Sbjct: 194 KILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTG 248
Query: 275 R 275
R
Sbjct: 249 R 249
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 113/241 (46%), Gaps = 44/241 (18%)
Query: 57 NKENTFTYRQLVAAT-----DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQ 111
++E YRQ + T + +++ + +G G +G+V +TG VAVK+L FQ
Sbjct: 1 SQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQ 59
Query: 112 G---EKEFLVEVLMLSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLED--------HL 160
K E+ +L M+H N++ L+ + P SLE+ HL
Sbjct: 60 SIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHL 107
Query: 161 LG-----LTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHP 215
+G + K D + + I RGL+Y+H+ AD +I+RDLK N+ + +
Sbjct: 108 MGADLNNIVKCQKLTDDHVQFLIYQ-ILRGLKYIHS-AD--IIHRDLKPSNLAVNEDCEL 163
Query: 216 KLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTGKLTAKS-DIFSFGVVLLELITG 274
K+ DFGLA+ +V+TR Y APE ++ DI+S G ++ EL+TG
Sbjct: 164 KILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 218
Query: 275 R 275
R
Sbjct: 219 R 219
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 111/241 (46%), Gaps = 44/241 (18%)
Query: 57 NKENTFTYRQLVAAT-----DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQ 111
++E YRQ + T + +++ + +G G +G+V +TG VAVK+L FQ
Sbjct: 4 SQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQ 62
Query: 112 G---EKEFLVEVLMLSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLED--------HL 160
K E+ +L M+H N++ L+ + P SLE+ HL
Sbjct: 63 SIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHL 110
Query: 161 LG-----LTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHP 215
+G + K D + + I RGL+Y+H+ AD +I+RDLK N+ + +
Sbjct: 111 MGADLNNIVKCQKLTDDHVQFLIYQ-ILRGLKYIHS-AD--IIHRDLKPSNLAVNEDCEL 166
Query: 216 KLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTG-KLTAKSDIFSFGVVLLELITG 274
K+ DFGLA+ +V+TR Y APE DI+S G ++ EL+TG
Sbjct: 167 KILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 221
Query: 275 R 275
R
Sbjct: 222 R 222
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 105/227 (46%), Gaps = 25/227 (11%)
Query: 73 NFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQ-LDDTGFQGEKEFLVEVLMLSLMRHPNL 131
++ DT +G G FG VY+ KL ++G++VA+K+ L D F+ E+ ++ + H N+
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-----ELQIMRKLDHCNI 75
Query: 132 VHLIGYCAEGTQRL------LVYEYMP--LGSLEDHLLGLTPEMKPLDWNTRMKIAAGAA 183
V L + ++ LV +Y+P + + H + + M
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM---YQLF 132
Query: 184 RGLEYLHNKADPPVIYRDLKAGNILLGKGFHP-KLSDFGLAKFGPTGDKSHVSTRVMGTH 242
R L Y+H+ + +RD+K N+LL KL DFG AK G+ + + +
Sbjct: 133 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSR 186
Query: 243 GYCAPEYAT-TGKLTAKSDIFSFGVVLLELITGRPAMDDSQGHERML 288
Y APE T+ D++S G VL EL+ G+P G ++++
Sbjct: 187 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 233
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 105/227 (46%), Gaps = 25/227 (11%)
Query: 73 NFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQ-LDDTGFQGEKEFLVEVLMLSLMRHPNL 131
++ DT +G G FG VY+ KL ++G++VA+K+ L D F+ E+ ++ + H N+
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-----ELQIMRKLDHCNI 87
Query: 132 VHLIGYCAEGTQRL------LVYEYMP--LGSLEDHLLGLTPEMKPLDWNTRMKIAAGAA 183
V L + ++ LV +Y+P + + H + + M
Sbjct: 88 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM---YQLF 144
Query: 184 RGLEYLHNKADPPVIYRDLKAGNILLGKGFHP-KLSDFGLAKFGPTGDKSHVSTRVMGTH 242
R L Y+H+ + +RD+K N+LL KL DFG AK G+ + + +
Sbjct: 145 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSR 198
Query: 243 GYCAPEYAT-TGKLTAKSDIFSFGVVLLELITGRPAMDDSQGHERML 288
Y APE T+ D++S G VL EL+ G+P G ++++
Sbjct: 199 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 245
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 107/229 (46%), Gaps = 29/229 (12%)
Query: 73 NFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQ-LDDTGFQGEKEFLVEVLMLSLMRHPNL 131
++ DT +G G FG VY+ KL ++G++VA+K+ L D F+ E+ ++ + H N+
Sbjct: 100 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-----ELQIMRKLDHCNI 154
Query: 132 VHLIGYCAEGTQRL------LVYEYMP--LGSLEDHLLGLTPEMKPLDWNTRMKIAAGAA 183
V L + ++ LV +Y+P + + H + + M
Sbjct: 155 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM---YQLF 211
Query: 184 RGLEYLHNKADPPVIYRDLKAGNILLGKGFHP-KLSDFGLAKFGPTGDK--SHVSTRVMG 240
R L Y+H+ + +RD+K N+LL KL DFG AK G+ S++ +R
Sbjct: 212 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-- 266
Query: 241 THGYCAPEYAT-TGKLTAKSDIFSFGVVLLELITGRPAMDDSQGHERML 288
Y APE T+ D++S G VL EL+ G+P G ++++
Sbjct: 267 ---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 312
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 111/241 (46%), Gaps = 44/241 (18%)
Query: 57 NKENTFTYRQLVAAT-----DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQ 111
++E YRQ + T + +++ + +G G +G+V +TG VAVK+L FQ
Sbjct: 25 SQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQ 83
Query: 112 G---EKEFLVEVLMLSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLED--------HL 160
K E+ +L M+H N++ L+ + P SLE+ HL
Sbjct: 84 SIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHL 131
Query: 161 LG-----LTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHP 215
+G + K D + + I RGL+Y+H+ AD +I+RDLK N+ + +
Sbjct: 132 MGADLNNIVKCQKLTDDHVQFLIYQ-ILRGLKYIHS-AD--IIHRDLKPSNLAVNEDCEL 187
Query: 216 KLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTG-KLTAKSDIFSFGVVLLELITG 274
K+ DFGLA+ +V+TR Y APE DI+S G ++ EL+TG
Sbjct: 188 KILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 242
Query: 275 R 275
R
Sbjct: 243 R 243
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 111/241 (46%), Gaps = 44/241 (18%)
Query: 57 NKENTFTYRQLVAAT-----DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQ 111
++E YRQ + T + +++ + +G G +G+V +TG VAVK+L FQ
Sbjct: 13 SQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQ 71
Query: 112 G---EKEFLVEVLMLSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLED--------HL 160
K E+ +L M+H N++ L+ + P SLE+ HL
Sbjct: 72 SIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHL 119
Query: 161 LG-----LTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHP 215
+G + K D + + I RGL+Y+H+ AD +I+RDLK N+ + +
Sbjct: 120 MGADLNNIVKCQKLTDDHVQFLIYQ-ILRGLKYIHS-AD--IIHRDLKPSNLAVNEDCEL 175
Query: 216 KLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTG-KLTAKSDIFSFGVVLLELITG 274
K+ DFGLA+ +V+TR Y APE DI+S G ++ EL+TG
Sbjct: 176 KILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 230
Query: 275 R 275
R
Sbjct: 231 R 231
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 111/241 (46%), Gaps = 44/241 (18%)
Query: 57 NKENTFTYRQLVAAT-----DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQ 111
++E YRQ + T + +++ + +G G +G+V +TG VAVK+L FQ
Sbjct: 22 SQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQ 80
Query: 112 G---EKEFLVEVLMLSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLED--------HL 160
K E+ +L M+H N++ L+ + P SLE+ HL
Sbjct: 81 SIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHL 128
Query: 161 LG-----LTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHP 215
+G + K D + + I RGL+Y+H+ AD +I+RDLK N+ + +
Sbjct: 129 MGADLNNIVKCQKLTDDHVQFLIYQ-ILRGLKYIHS-AD--IIHRDLKPSNLAVNEDCEL 184
Query: 216 KLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTG-KLTAKSDIFSFGVVLLELITG 274
K+ DFGLA+ +V+TR Y APE DI+S G ++ EL+TG
Sbjct: 185 KILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 239
Query: 275 R 275
R
Sbjct: 240 R 240
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 96/206 (46%), Gaps = 13/206 (6%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFL-VEVLMLSLMRHPN 130
D++ LG G FG V++ TG A K + T + +KE + E+ +S++RHP
Sbjct: 51 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVM-TPHESDKETVRKEIQTMSVLRHPT 109
Query: 131 LVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLH 190
LV+L + + +++YE+M G L + E + + ++ +GL ++H
Sbjct: 110 LVNLHDAFEDDNEMVMIYEFMSGGEL---FEKVADEHNKMSEDEAVEYMRQVCKGLCHMH 166
Query: 191 NKADPPVIYRDLKAGNILL--GKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPE 248
++ DLK NI+ + KL DFGL V+T GT + APE
Sbjct: 167 ENN---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT---GTAEFAAPE 220
Query: 249 YATTGKLTAKSDIFSFGVVLLELITG 274
A + +D++S GV+ L++G
Sbjct: 221 VAEGKPVGYYTDMWSVGVLSYILLSG 246
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 93/199 (46%), Gaps = 16/199 (8%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLVHLIGYCA 139
LG+G FG V++ K +TG AVK++ F+ E E++ + + P +V L G
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVE-----ELVACAGLSSPRIVPLYGAVR 134
Query: 140 EGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIY 199
EG + E + GSL L +M L + + A GLEYLH + +++
Sbjct: 135 EGPWVNIFMELLEGGSLGQ----LIKQMGCLPEDRALYYLGQALEGLEYLHTRR---ILH 187
Query: 200 RDLKAGNILLGK-GFHPKLSDFGLA-KFGPTGDKSHVST--RVMGTHGYCAPEYATTGKL 255
D+KA N+LL G L DFG A P G + T + GT + APE
Sbjct: 188 GDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPC 247
Query: 256 TAKSDIFSFGVVLLELITG 274
AK DI+S ++L ++ G
Sbjct: 248 DAKVDIWSSCCMMLHMLNG 266
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 112/241 (46%), Gaps = 44/241 (18%)
Query: 57 NKENTFTYRQLVAAT-----DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQ 111
++E YRQ + T + +++ + +G G +G+V +TG VAVK+L FQ
Sbjct: 2 SQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQ 60
Query: 112 G---EKEFLVEVLMLSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLED--------HL 160
K E+ +L M+H N++ L+ + P SLE+ HL
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHL 108
Query: 161 LG-----LTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHP 215
+G + K D + + I RGL+Y+H+ AD +I+RDLK N+ + +
Sbjct: 109 MGADLNNIVKCQKLTDDHVQFLIYQ-ILRGLKYIHS-AD--IIHRDLKPSNLAVNEDCEL 164
Query: 216 KLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTGKLTAKS-DIFSFGVVLLELITG 274
K+ DFGLA+ V+TR Y APE ++ DI+S G ++ EL+TG
Sbjct: 165 KILDFGLARHTDDEMAGFVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
Query: 275 R 275
R
Sbjct: 220 R 220
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 113/241 (46%), Gaps = 44/241 (18%)
Query: 57 NKENTFTYRQLVAAT-----DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQ 111
++E YRQ + T + +++ + +G G +G+V +TG VAVK+L FQ
Sbjct: 7 SQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQ 65
Query: 112 G---EKEFLVEVLMLSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLED--------HL 160
K E+ +L M+H N++ L+ + P SLE+ HL
Sbjct: 66 SIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHL 113
Query: 161 LG-----LTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHP 215
+G + K D + + I RGL+Y+H+ AD +I+RDLK N+ + +
Sbjct: 114 MGADLNNIVKCQKLTDDHVQFLIYQ-ILRGLKYIHS-AD--IIHRDLKPSNLAVNEDCEL 169
Query: 216 KLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTGKLTAKS-DIFSFGVVLLELITG 274
K+ DFGLA+ +V+TR Y APE ++ DI+S G ++ EL+TG
Sbjct: 170 KILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 224
Query: 275 R 275
R
Sbjct: 225 R 225
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 111/241 (46%), Gaps = 44/241 (18%)
Query: 57 NKENTFTYRQLVAAT-----DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQ 111
++E YRQ + T + +++ + +G G +G+V +TG VAVK+L FQ
Sbjct: 2 SQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQ 60
Query: 112 G---EKEFLVEVLMLSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLED--------HL 160
K E+ +L M+H N++ L+ + P SLE+ HL
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHL 108
Query: 161 LG-----LTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHP 215
+G + K D + + I RGL+Y+H+ AD +I+RDLK N+ + +
Sbjct: 109 MGADLNNIVKCQKLTDDHVQFLIYQ-ILRGLKYIHS-AD--IIHRDLKPSNLAVNEDCEL 164
Query: 216 KLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTG-KLTAKSDIFSFGVVLLELITG 274
K+ DFGLA+ +V+TR Y APE DI+S G ++ EL+TG
Sbjct: 165 KILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
Query: 275 R 275
R
Sbjct: 220 R 220
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 111/241 (46%), Gaps = 44/241 (18%)
Query: 57 NKENTFTYRQLVAAT-----DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQ 111
++E YRQ + T + +++ + +G G +G+V +TG VAVK+L FQ
Sbjct: 13 SQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQ 71
Query: 112 G---EKEFLVEVLMLSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLED--------HL 160
K E+ +L M+H N++ L+ + P SLE+ HL
Sbjct: 72 SIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHL 119
Query: 161 LG-----LTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHP 215
+G + K D + + I RGL+Y+H+ AD +I+RDLK N+ + +
Sbjct: 120 MGADLNNIVKCQKLTDDHVQFLIYQ-ILRGLKYIHS-AD--IIHRDLKPSNLAVNEDXEL 175
Query: 216 KLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTG-KLTAKSDIFSFGVVLLELITG 274
K+ DFGLA+ +V+TR Y APE DI+S G ++ EL+TG
Sbjct: 176 KILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 230
Query: 275 R 275
R
Sbjct: 231 R 231
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 110/241 (45%), Gaps = 44/241 (18%)
Query: 57 NKENTFTYRQLVAAT-----DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQ 111
++E YRQ + T + +++ + +G G +G+V +TG VAVK+L FQ
Sbjct: 2 SQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQ 60
Query: 112 G---EKEFLVEVLMLSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLED--------HL 160
K E+ +L M+H N++ L+ + P SLE+ HL
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHL 108
Query: 161 LG-----LTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHP 215
+G + K D + + I RGL+Y+H+ AD +I+RDLK N+ + +
Sbjct: 109 MGADLNNIVKCQKLTDDHVQFLIYQ-ILRGLKYIHS-AD--IIHRDLKPSNLAVNEDCEL 164
Query: 216 KLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTG-KLTAKSDIFSFGVVLLELITG 274
K+ DFGLA+ V+TR Y APE DI+S G ++ EL+TG
Sbjct: 165 KILDFGLARHTDDEMAGFVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
Query: 275 R 275
R
Sbjct: 220 R 220
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 113/241 (46%), Gaps = 44/241 (18%)
Query: 57 NKENTFTYRQLVAAT-----DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQ 111
++E YRQ + T + +++ + +G G +G+V +TG VAVK+L FQ
Sbjct: 4 SQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQ 62
Query: 112 G---EKEFLVEVLMLSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLED--------HL 160
K E+ +L M+H N++ L+ + P SLE+ HL
Sbjct: 63 SIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHL 110
Query: 161 LG-----LTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHP 215
+G + K D + + I RGL+Y+H+ AD +I+RDLK N+ + +
Sbjct: 111 MGADLNNIVKCQKLTDDHVQFLIYQ-ILRGLKYIHS-AD--IIHRDLKPSNLAVNEDSEL 166
Query: 216 KLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTGKLTAKS-DIFSFGVVLLELITG 274
K+ DFGLA+ +V+TR Y APE ++ DI+S G ++ EL+TG
Sbjct: 167 KILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 221
Query: 275 R 275
R
Sbjct: 222 R 222
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 111/241 (46%), Gaps = 44/241 (18%)
Query: 57 NKENTFTYRQLVAAT-----DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQ 111
++E YRQ + T + +++ + +G G +G+V +TG VAVK+L FQ
Sbjct: 2 SQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQ 60
Query: 112 G---EKEFLVEVLMLSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLED--------HL 160
K E+ +L M+H N++ L+ + P SLE+ HL
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHL 108
Query: 161 LG-----LTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHP 215
+G + K D + + I RGL+Y+H+ AD +I+RDLK N+ + +
Sbjct: 109 MGADLNNIVKCQKLTDDHVQFLIYQ-ILRGLKYIHS-AD--IIHRDLKPSNLAVNEDCEL 164
Query: 216 KLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTG-KLTAKSDIFSFGVVLLELITG 274
K+ DFGLA+ +V+TR Y APE DI+S G ++ EL+TG
Sbjct: 165 KILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
Query: 275 R 275
R
Sbjct: 220 R 220
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 113/241 (46%), Gaps = 44/241 (18%)
Query: 57 NKENTFTYRQLVAAT-----DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQ 111
++E YRQ + T + +++ + +G G +G+V +TG VAVK+L FQ
Sbjct: 21 SQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQ 79
Query: 112 G---EKEFLVEVLMLSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLED--------HL 160
K E+ +L M+H N++ L+ + P SLE+ HL
Sbjct: 80 SIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHL 127
Query: 161 LG-----LTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHP 215
+G + K D + + I RGL+Y+H+ AD +I+RDLK N+ + +
Sbjct: 128 MGADLNNIVKCQKLTDDHVQFLIYQ-ILRGLKYIHS-AD--IIHRDLKPSNLAVNEDCEL 183
Query: 216 KLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTGKLTAKS-DIFSFGVVLLELITG 274
K+ DFGLA+ +V+TR Y APE ++ DI+S G ++ EL+TG
Sbjct: 184 KILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 238
Query: 275 R 275
R
Sbjct: 239 R 239
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 112/241 (46%), Gaps = 44/241 (18%)
Query: 57 NKENTFTYRQLVAAT-----DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQ 111
++E YRQ + T + +++ + +G G +G+V +TG VAVK+L FQ
Sbjct: 22 SQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQ 80
Query: 112 G---EKEFLVEVLMLSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLED--------HL 160
K E+ +L M+H N++ L+ + P SLE+ HL
Sbjct: 81 SIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHL 128
Query: 161 LG-----LTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHP 215
+G + K D + + I RGL+Y+H+ AD +I+RDLK N+ + +
Sbjct: 129 MGADLNNIVKCQKLTDDHVQFLIYQ-ILRGLKYIHS-AD--IIHRDLKPSNLAVNEDCEL 184
Query: 216 KLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTGKLTAKS-DIFSFGVVLLELITG 274
K+ DFGLA+ V+TR Y APE ++ DI+S G ++ EL+TG
Sbjct: 185 KILDFGLARHTDDEMXGXVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 239
Query: 275 R 275
R
Sbjct: 240 R 240
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 111/241 (46%), Gaps = 44/241 (18%)
Query: 57 NKENTFTYRQLVAAT-----DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQ 111
++E YRQ + T + +++ + +G G +G+V +TG VAVK+L FQ
Sbjct: 8 SQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQ 66
Query: 112 G---EKEFLVEVLMLSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLED--------HL 160
K E+ +L M+H N++ L+ + P SLE+ HL
Sbjct: 67 SIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHL 114
Query: 161 LG-----LTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHP 215
+G + K D + + I RGL+Y+H+ AD +I+RDLK N+ + +
Sbjct: 115 MGADLNNIVKCQKLTDDHVQFLIYQ-ILRGLKYIHS-AD--IIHRDLKPSNLAVNEDSEL 170
Query: 216 KLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTG-KLTAKSDIFSFGVVLLELITG 274
K+ DFGLA+ +V+TR Y APE DI+S G ++ EL+TG
Sbjct: 171 KILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 225
Query: 275 R 275
R
Sbjct: 226 R 226
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 105/227 (46%), Gaps = 25/227 (11%)
Query: 73 NFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQ-LDDTGFQGEKEFLVEVLMLSLMRHPNL 131
++ DT +G G FG VY+ KL ++G++VA+K+ L D F+ E+ ++ + H N+
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-----ELQIMRKLDHCNI 109
Query: 132 VHLIGYCAEGTQRL------LVYEYMP--LGSLEDHLLGLTPEMKPLDWNTRMKIAAGAA 183
V L + ++ LV +Y+P + + H + + M
Sbjct: 110 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM---YQLF 166
Query: 184 RGLEYLHNKADPPVIYRDLKAGNILLGKGFHP-KLSDFGLAKFGPTGDKSHVSTRVMGTH 242
R L Y+H+ + +RD+K N+LL KL DFG AK G+ + + +
Sbjct: 167 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSR 220
Query: 243 GYCAPEYAT-TGKLTAKSDIFSFGVVLLELITGRPAMDDSQGHERML 288
Y APE T+ D++S G VL EL+ G+P G ++++
Sbjct: 221 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 267
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 105/227 (46%), Gaps = 25/227 (11%)
Query: 73 NFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQ-LDDTGFQGEKEFLVEVLMLSLMRHPNL 131
++ DT +G G FG VY+ KL ++G++VA+K+ L D F+ E+ ++ + H N+
Sbjct: 25 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-----ELQIMRKLDHCNI 79
Query: 132 VHLIGYCAEGTQRL------LVYEYMP--LGSLEDHLLGLTPEMKPLDWNTRMKIAAGAA 183
V L + ++ LV +Y+P + + H + + M
Sbjct: 80 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM---YQLF 136
Query: 184 RGLEYLHNKADPPVIYRDLKAGNILLGKGFHP-KLSDFGLAKFGPTGDKSHVSTRVMGTH 242
R L Y+H+ + +RD+K N+LL KL DFG AK G+ + + +
Sbjct: 137 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSR 190
Query: 243 GYCAPEYAT-TGKLTAKSDIFSFGVVLLELITGRPAMDDSQGHERML 288
Y APE T+ D++S G VL EL+ G+P G ++++
Sbjct: 191 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 237
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 107/228 (46%), Gaps = 27/228 (11%)
Query: 73 NFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLV 132
++ DT +G G FG VY+ KL ++G++VA+K++ QG+ E+ ++ + H N+V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQGKAFKNRELQIMRKLDHCNIV 76
Query: 133 HLIGYCAEGTQRL------LVYEYMP--LGSLEDHLLGLTPEMKPLDWNTRMKIAAGAAR 184
L + ++ LV +Y+P + + H + + M R
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM---YQLFR 133
Query: 185 GLEYLHNKADPPVIYRDLKAGNILLGKGFHP-KLSDFGLAKFGPTGDK--SHVSTRVMGT 241
L Y+H+ + +RD+K N+LL KL DFG AK G+ S++ +R
Sbjct: 134 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY--- 187
Query: 242 HGYCAPEYAT-TGKLTAKSDIFSFGVVLLELITGRPAMDDSQGHERML 288
Y APE T+ D++S G VL EL+ G+P G ++++
Sbjct: 188 --YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 233
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 108/234 (46%), Gaps = 44/234 (18%)
Query: 64 YRQLVAAT-----DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQG---EKE 115
YRQ + T + +++ + +G G +G+V +TG VAVK+L FQ K
Sbjct: 6 YRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKR 64
Query: 116 FLVEVLMLSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLED--------HLLG----- 162
E+ +L M+H N++ L+ + P SLE+ HL+G
Sbjct: 65 TYRELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNN 112
Query: 163 LTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGL 222
+ K D + + I RGL+Y+H+ AD +I+RDLK N+ + + K+ DFGL
Sbjct: 113 IVKCQKLTDDHVQFLIYQ-ILRGLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGL 168
Query: 223 AKFGPTGDKSHVSTRVMGTHGYCAPEYATTG-KLTAKSDIFSFGVVLLELITGR 275
A+ +V+TR Y APE DI+S G ++ EL+TGR
Sbjct: 169 ARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 112/241 (46%), Gaps = 44/241 (18%)
Query: 57 NKENTFTYRQLVAAT-----DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQ 111
++E YRQ + T + +++ + +G G +G+V +TG VAVK+L FQ
Sbjct: 2 SQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQ 60
Query: 112 G---EKEFLVEVLMLSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLED--------HL 160
K E+ +L M+H N++ L+ + P SLE+ HL
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHL 108
Query: 161 LG-----LTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHP 215
+G + K D + + I RGL+Y+H+ AD +I+RDLK N+ + +
Sbjct: 109 MGADLNNIVKSQKLTDDHVQFLIYQ-ILRGLKYIHS-AD--IIHRDLKPSNLAVNEDSEL 164
Query: 216 KLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTGKLTAKS-DIFSFGVVLLELITG 274
K+ DFGL + +V+TR Y APE ++ DI+S G ++ EL+TG
Sbjct: 165 KILDFGLCRHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
Query: 275 R 275
R
Sbjct: 220 R 220
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 108/234 (46%), Gaps = 44/234 (18%)
Query: 64 YRQLVAAT-----DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQG---EKE 115
YRQ + T + +++ + +G G +G+V +TG VAVK+L FQ K
Sbjct: 5 YRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKR 63
Query: 116 FLVEVLMLSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLED--------HLLG----- 162
E+ +L M+H N++ L+ + P SLE+ HL+G
Sbjct: 64 TYRELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNN 111
Query: 163 LTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGL 222
+ K D + + I RGL+Y+H+ AD +I+RDLK N+ + + K+ DFGL
Sbjct: 112 IVKCQKLTDDHVQFLIYQ-ILRGLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGL 167
Query: 223 AKFGPTGDKSHVSTRVMGTHGYCAPEYATTG-KLTAKSDIFSFGVVLLELITGR 275
A+ +V+TR Y APE DI+S G ++ EL+TGR
Sbjct: 168 ARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 108/234 (46%), Gaps = 44/234 (18%)
Query: 64 YRQLVAAT-----DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQG---EKE 115
YRQ + T + +++ + +G G +G+V +TG VAVK+L FQ K
Sbjct: 6 YRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKR 64
Query: 116 FLVEVLMLSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLED--------HLLG----- 162
E+ +L M+H N++ L+ + P SLE+ HL+G
Sbjct: 65 TYRELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNN 112
Query: 163 LTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGL 222
+ K D + + I RGL+Y+H+ AD +I+RDLK N+ + + K+ DFGL
Sbjct: 113 IVKCQKLTDDHVQFLIYQ-ILRGLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGL 168
Query: 223 AKFGPTGDKSHVSTRVMGTHGYCAPEYATTG-KLTAKSDIFSFGVVLLELITGR 275
A+ +V+TR Y APE DI+S G ++ EL+TGR
Sbjct: 169 ARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 108/234 (46%), Gaps = 44/234 (18%)
Query: 64 YRQLVAAT-----DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQG---EKE 115
YRQ + T + +++ + +G G +G+V +TG VAVK+L FQ K
Sbjct: 7 YRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKR 65
Query: 116 FLVEVLMLSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLED--------HLLG----- 162
E+ +L M+H N++ L+ + P SLE+ HL+G
Sbjct: 66 TYRELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNN 113
Query: 163 LTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGL 222
+ K D + + I RGL+Y+H+ AD +I+RDLK N+ + + K+ DFGL
Sbjct: 114 IVKCQKLTDDHVQFLIYQ-ILRGLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGL 169
Query: 223 AKFGPTGDKSHVSTRVMGTHGYCAPEYATTG-KLTAKSDIFSFGVVLLELITGR 275
A+ +V+TR Y APE DI+S G ++ EL+TGR
Sbjct: 170 ARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 107/234 (45%), Gaps = 44/234 (18%)
Query: 64 YRQLVAAT-----DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQG---EKE 115
YRQ + T + +++ + +G G +G+V +TG VAVK+L FQ K
Sbjct: 5 YRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQSIIHAKR 63
Query: 116 FLVEVLMLSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLED--------HLLG----- 162
E+ +L M+H N++ L+ + P SLE+ HL+G
Sbjct: 64 TYRELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNN 111
Query: 163 LTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGL 222
+ K D + + I RGL+Y+H+ AD +I+RDLK N+ + + K+ DFGL
Sbjct: 112 IVKCQKLTDDHVQFLIYQ-ILRGLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGL 167
Query: 223 AKFGPTGDKSHVSTRVMGTHGYCAPEYATTG-KLTAKSDIFSFGVVLLELITGR 275
A+ V+TR Y APE DI+S G ++ EL+TGR
Sbjct: 168 ARHTDDEMAGFVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 107/228 (46%), Gaps = 27/228 (11%)
Query: 73 NFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLV 132
++ DT +G G FG VY+ KL ++G++VA+K++ QG+ E+ ++ + H N+V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQGKAFKNRELQIMRKLDHCNIV 76
Query: 133 HLIGYCAEGTQRL------LVYEYMP--LGSLEDHLLGLTPEMKPLDWNTRMKIAAGAAR 184
L + ++ LV +Y+P + + H + + M R
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM---YQLFR 133
Query: 185 GLEYLHNKADPPVIYRDLKAGNILLGKGFHP-KLSDFGLAKFGPTGDK--SHVSTRVMGT 241
L Y+H+ + +RD+K N+LL KL DFG AK G+ S++ +R
Sbjct: 134 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY--- 187
Query: 242 HGYCAPEYAT-TGKLTAKSDIFSFGVVLLELITGRPAMDDSQGHERML 288
Y APE T+ D++S G VL EL+ G+P G ++++
Sbjct: 188 --YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 233
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 96/206 (46%), Gaps = 13/206 (6%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFL-VEVLMLSLMRHPN 130
D++ LG G FG V++ TG A K + T + +KE + E+ +S++RHP
Sbjct: 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVM-TPHESDKETVRKEIQTMSVLRHPT 215
Query: 131 LVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLH 190
LV+L + + +++YE+M G L + E + + ++ +GL ++H
Sbjct: 216 LVNLHDAFEDDNEMVMIYEFMSGGEL---FEKVADEHNKMSEDEAVEYMRQVCKGLCHMH 272
Query: 191 NKADPPVIYRDLKAGNILL--GKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPE 248
++ DLK NI+ + KL DFGL V+T GT + APE
Sbjct: 273 ENN---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT---GTAEFAAPE 326
Query: 249 YATTGKLTAKSDIFSFGVVLLELITG 274
A + +D++S GV+ L++G
Sbjct: 327 VAEGKPVGYYTDMWSVGVLSYILLSG 352
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 96/220 (43%), Gaps = 14/220 (6%)
Query: 71 TDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGE--KEFLVEVLMLSLMRH 128
TD+++ LG+G F V + Q A K ++ ++ E + L++H
Sbjct: 30 TDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKH 89
Query: 129 PNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEY 188
PN+V L +E LV++ + G L + ++ ++ + + + LE
Sbjct: 90 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAR-------EYYSEADASHCIHQILES 142
Query: 189 LHNKADPPVIYRDLKAGNILLG---KGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYC 245
+++ +++RDLK N+LL KG KL+DFGLA + GT GY
Sbjct: 143 VNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAI--EVQGEQQAWFGFAGTPGYL 200
Query: 246 APEYATTGKLTAKSDIFSFGVVLLELITGRPAMDDSQGHE 285
+PE DI++ GV+L L+ G P D H+
Sbjct: 201 SPEVLRKDPYGKPVDIWACGVILYILLVGYPPFWDEDQHK 240
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 105/226 (46%), Gaps = 23/226 (10%)
Query: 73 NFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLV 132
++ DT +G G FG VY+ KL ++G++VA+K++ QG+ E+ ++ + H N+V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQGKAFKNRELQIMRKLDHCNIV 76
Query: 133 HLIGYCAEGTQRL------LVYEYMP--LGSLEDHLLGLTPEMKPLDWNTRMKIAAGAAR 184
L + ++ LV +Y+P + + H + + M R
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYM---YQLFR 133
Query: 185 GLEYLHNKADPPVIYRDLKAGNILLGKGFHP-KLSDFGLAKFGPTGDKSHVSTRVMGTHG 243
L Y+H+ + +RD+K N+LL KL DFG AK G+ + + +
Sbjct: 134 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRY 187
Query: 244 YCAPEYAT-TGKLTAKSDIFSFGVVLLELITGRPAMDDSQGHERML 288
Y APE T+ D++S G VL EL+ G+P G ++++
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 233
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 93/199 (46%), Gaps = 16/199 (8%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLVHLIGYCA 139
+G+G FG V++ K +TG AVK++ F+ E E++ + + P +V L G
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVE-----ELVACAGLSSPRIVPLYGAVR 120
Query: 140 EGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIY 199
EG + E + GSL L +M L + + A GLEYLH + +++
Sbjct: 121 EGPWVNIFMELLEGGSLGQ----LIKQMGCLPEDRALYYLGQALEGLEYLHTRR---ILH 173
Query: 200 RDLKAGNILLGK-GFHPKLSDFGLA-KFGPTGDKSHVST--RVMGTHGYCAPEYATTGKL 255
D+KA N+LL G L DFG A P G + T + GT + APE
Sbjct: 174 GDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPC 233
Query: 256 TAKSDIFSFGVVLLELITG 274
AK DI+S ++L ++ G
Sbjct: 234 DAKVDIWSSCCMMLHMLNG 252
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 112/241 (46%), Gaps = 44/241 (18%)
Query: 57 NKENTFTYRQLVAAT-----DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQ 111
++E YRQ + T + +++ + +G G +G+V +TG VAVK+L FQ
Sbjct: 2 SQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQ 60
Query: 112 G---EKEFLVEVLMLSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLED--------HL 160
K E+ +L M+H N++ L+ + P SLE+ HL
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHL 108
Query: 161 LG-----LTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHP 215
+G + K D + + I RGL+Y+H+ AD +I+RDLK N+ + +
Sbjct: 109 MGADLNNIVKCQKLTDDHVQFLIYQ-ILRGLKYIHS-AD--IIHRDLKPSNLAVNEDCEL 164
Query: 216 KLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTG-KLTAKSDIFSFGVVLLELITG 274
K+ DFGLA+ T D+ T + T Y APE DI+S G ++ EL+TG
Sbjct: 165 KILDFGLARH--TDDE---MTGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
Query: 275 R 275
R
Sbjct: 220 R 220
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 94/213 (44%), Gaps = 20/213 (9%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEK------EFLVEVLMLSL 125
D+++ LG G F V K + TG+ A K + + E EV +L
Sbjct: 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILRE 64
Query: 126 MRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARG 185
+RHPN++ L T +L+ E + G L D L E + L + + G
Sbjct: 65 IRHPNIITLHDIFENKTDVVLILELVSGGELFDFL----AEKESLTEDEATQFLKQILDG 120
Query: 186 LEYLHNKADPPVIYRDLKAGNILLGKGFHP----KLSDFGLAKFGPTGDKSHVSTRVMGT 241
+ YLH+K + + DLK NI+L P KL DFG+A G++ + GT
Sbjct: 121 VHYLHSKR---IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF---KNIFGT 174
Query: 242 HGYCAPEYATTGKLTAKSDIFSFGVVLLELITG 274
+ APE L ++D++S GV+ L++G
Sbjct: 175 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 207
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 113/241 (46%), Gaps = 44/241 (18%)
Query: 57 NKENTFTYRQLVAAT-----DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQ 111
++E YRQ + T + +++ + +G G +G+V +TG VAVK+L FQ
Sbjct: 2 SQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQ 60
Query: 112 G---EKEFLVEVLMLSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLED--------HL 160
K E+ +L M+H N++ L+ + P SLE+ HL
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHL 108
Query: 161 LG-----LTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHP 215
+G + K D + + I RGL+Y+H+ AD +I+RDLK N+ + +
Sbjct: 109 MGADLNNIVKCQKLTDDHVQFLIYQ-ILRGLKYIHS-AD--IIHRDLKPSNLAVNEDCEL 164
Query: 216 KLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTGKLTAKS-DIFSFGVVLLELITG 274
K+ D+GLA+ +V+TR Y APE ++ DI+S G ++ EL+TG
Sbjct: 165 KILDYGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
Query: 275 R 275
R
Sbjct: 220 R 220
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 93/199 (46%), Gaps = 16/199 (8%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLVHLIGYCA 139
+G+G FG V++ K +TG AVK++ F+ E E++ + + P +V L G
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVE-----ELVACAGLSSPRIVPLYGAVR 136
Query: 140 EGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIY 199
EG + E + GSL L +M L + + A GLEYLH + +++
Sbjct: 137 EGPWVNIFMELLEGGSLGQ----LIKQMGCLPEDRALYYLGQALEGLEYLHTRR---ILH 189
Query: 200 RDLKAGNILLGK-GFHPKLSDFGLA-KFGPTGDKSHVST--RVMGTHGYCAPEYATTGKL 255
D+KA N+LL G L DFG A P G + T + GT + APE
Sbjct: 190 GDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPC 249
Query: 256 TAKSDIFSFGVVLLELITG 274
AK DI+S ++L ++ G
Sbjct: 250 DAKVDIWSSCCMMLHMLNG 268
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 89/199 (44%), Gaps = 12/199 (6%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDT--GFQGEKEFLVEVLMLSLMRH-PNLVHLIG 136
LG+G F V + TGQ A K L G E L E+ +L L + P +++L
Sbjct: 37 LGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHE 96
Query: 137 YCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPP 196
++ +L+ EY G + L EM + N +++ G+ YLH
Sbjct: 97 VYENTSEIILILEYAAGGEIFSLCLPELAEM--VSENDVIRLIKQILEGVYYLHQNN--- 151
Query: 197 VIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVST--RVMGTHGYCAPEYATTGK 254
+++ DLK NILL +P L D + FG + H +MGT Y APE
Sbjct: 152 IVHLDLKPQNILLS-SIYP-LGDIKIVDFGMSRKIGHACELREIMGTPEYLAPEILNYDP 209
Query: 255 LTAKSDIFSFGVVLLELIT 273
+T +D+++ G++ L+T
Sbjct: 210 ITTATDMWNIGIIAYMLLT 228
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 73/152 (48%), Gaps = 10/152 (6%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEV-LMLSLMRHPNLVHLIGYC 138
L +GGF VY+ + +G+ A+K+L + + + EV M L HPN+V
Sbjct: 36 LAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAA 95
Query: 139 AEGTQR-------LLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHN 191
+ G + L+ + G L + L + PL +T +KI R ++++H
Sbjct: 96 SIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESR-GPLSCDTVLKIFYQTCRAVQHMH- 153
Query: 192 KADPPVIYRDLKAGNILLGKGFHPKLSDFGLA 223
+ PP+I+RDLK N+LL KL DFG A
Sbjct: 154 RQKPPIIHRDLKVENLLLSNQGTIKLCDFGSA 185
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 96/210 (45%), Gaps = 16/210 (7%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEF---LVEVLMLSLMRH 128
D+F+ +G+G FG V + +T ++ A+K ++ E E+ ++ + H
Sbjct: 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEH 74
Query: 129 PNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEY 188
P LV+L + +V + + G L HL + T L+Y
Sbjct: 75 PFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHL----QQNVHFKEETVKLFICELVMALDY 130
Query: 189 LHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPE 248
L N+ +I+RD+K NILL + H ++DF +A P ++ ++T + GT Y APE
Sbjct: 131 LQNQR---IIHRDMKPDNILLDEHGHVHITDFNIAAMLPR--ETQITT-MAGTKPYMAPE 184
Query: 249 YATTGKLTAKS---DIFSFGVVLLELITGR 275
++ K S D +S GV EL+ GR
Sbjct: 185 MFSSRKGAGYSFAVDWWSLGVTAYELLRGR 214
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 90/202 (44%), Gaps = 18/202 (8%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLVHLIGYCA 139
LG G F V+ K TG++ A+K + + + E+ +L ++H N+V L
Sbjct: 17 LGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYE 76
Query: 140 EGTQRLLVYEYMPLGSLEDHLL--GLTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPV 197
T LV + + G L D +L G+ E D + ++ A + YLH +
Sbjct: 77 STTHYYLVMQLVSGGELFDRILERGVYTEK---DASLVIQQVLSAVK---YLHENG---I 127
Query: 198 IYRDLKAGNILL---GKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTGK 254
++RDLK N+L + ++DFGL+K G + + GT GY APE
Sbjct: 128 VHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG----IMSTACGTPGYVAPEVLAQKP 183
Query: 255 LTAKSDIFSFGVVLLELITGRP 276
+ D +S GV+ L+ G P
Sbjct: 184 YSKAVDCWSIGVITYILLCGYP 205
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 94/213 (44%), Gaps = 20/213 (9%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEK------EFLVEVLMLSL 125
D+++ LG G F V K + TG+ A K + + E EV +L
Sbjct: 26 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILRE 85
Query: 126 MRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARG 185
+RHPN++ L T +L+ E + G L D L E + L + + G
Sbjct: 86 IRHPNIITLHDIFENKTDVVLILELVSGGELFDFL----AEKESLTEDEATQFLKQILDG 141
Query: 186 LEYLHNKADPPVIYRDLKAGNILLGKGFHP----KLSDFGLAKFGPTGDKSHVSTRVMGT 241
+ YLH+K + + DLK NI+L P KL DFG+A G++ + GT
Sbjct: 142 VHYLHSKR---IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF---KNIFGT 195
Query: 242 HGYCAPEYATTGKLTAKSDIFSFGVVLLELITG 274
+ APE L ++D++S GV+ L++G
Sbjct: 196 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 228
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 110/241 (45%), Gaps = 44/241 (18%)
Query: 57 NKENTFTYRQLVAAT-----DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQ 111
++E YRQ + T + +++ + +G G +G+V +TG VAVK+L FQ
Sbjct: 2 SQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQ 60
Query: 112 G---EKEFLVEVLMLSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLED--------HL 160
K E+ +L M+H N++ L+ + P SLE+ HL
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHL 108
Query: 161 LG-----LTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHP 215
+G + K D + + I RGL+Y+H+ AD +I+RDLK N+ + +
Sbjct: 109 MGADLNNIVKCQKLTDDHVQFLIYQ-ILRGLKYIHS-AD--IIHRDLKPSNLAVNEDCEL 164
Query: 216 KLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTG-KLTAKSDIFSFGVVLLELITG 274
K+ DF LA+ +V+TR Y APE DI+S G ++ EL+TG
Sbjct: 165 KILDFYLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
Query: 275 R 275
R
Sbjct: 220 R 220
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 87/168 (51%), Gaps = 16/168 (9%)
Query: 119 EVLMLSLMRHPNLVHLIGYCAEGTQR--LLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRM 176
E+ +L + HPN+V L+ + + +V+E + G + + P +KPL +
Sbjct: 86 EIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVME-----VPTLKPLSEDQAR 140
Query: 177 KIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVST 236
+G+EYLH + +I+RD+K N+L+G+ H K++DFG++ D + +
Sbjct: 141 FYFQDLIKGIEYLHYQK---IIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDA--LLS 195
Query: 237 RVMGTHGYCAPEYATTGK--LTAKS-DIFSFGVVLLELITGR-PAMDD 280
+GT + APE + + + K+ D+++ GV L + G+ P MD+
Sbjct: 196 NTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDE 243
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 100/231 (43%), Gaps = 43/231 (18%)
Query: 73 NFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLV 132
+F++ LGQG FG V K + A + A+K++ T + L EV++L+ + H
Sbjct: 7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE-EKLSTILSEVMLLASLNHQ--- 62
Query: 133 HLIGYCAEGTQR----------------LLVYEYMPLGSLED--HLLGLTPEMKPLDWNT 174
+++ Y A +R + EY G+L D H L + W
Sbjct: 63 YVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEY-WRL 121
Query: 175 RMKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAK-FGPTGD--- 230
+I L Y+H++ +I+RDLK NI + + + K+ DFGLAK + D
Sbjct: 122 FRQIL----EALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILK 174
Query: 231 --------KSHVSTRVMGTHGYCAPEYAT-TGKLTAKSDIFSFGVVLLELI 272
S T +GT Y A E TG K D++S G++ E+I
Sbjct: 175 LDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 98/211 (46%), Gaps = 22/211 (10%)
Query: 73 NFKDTNFL---GQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHP 129
+FK NFL + G ++KG+ VV V ++ D + ++F E L + HP
Sbjct: 8 DFKQLNFLTKLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHP 67
Query: 130 NLVHLIGYCAE--GTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLE 187
N++ ++G C L+ +MP GSL + L T + +D + +K A ARG+
Sbjct: 68 NVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFV--VDQSQAVKFALDMARGMA 125
Query: 188 YLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAP 247
+LH +P + L + ++++ + ++S KF S S M + AP
Sbjct: 126 FLHT-LEPLIPRHALNSRSVMIDEDMTARIS-MADVKF------SFQSPGRMYAPAWVAP 177
Query: 248 EYAT-----TGKLTAKSDIFSFGVVLLELIT 273
E T + +A D++SF V+L EL+T
Sbjct: 178 EALQKKPEDTNRRSA--DMWSFAVLLWELVT 206
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 92/214 (42%), Gaps = 17/214 (7%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLVHLIGYC- 138
LG+GGF V + G A+K++ Q +E E M L HPN++ L+ YC
Sbjct: 37 LGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCL 96
Query: 139 ---AEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKADP 195
+ L+ + G+L + + L + L + + + G RGLE +H K
Sbjct: 97 RERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKG-- 154
Query: 196 PVIYRDLKAGNILLGKGFHPKLSDFG---LAKFGPTGDKSHVSTRVMG----THGYCAPE 248
+RDLK NILLG P L D G A G + ++ + T Y APE
Sbjct: 155 -YAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPE 213
Query: 249 YATTGK---LTAKSDIFSFGVVLLELITGRPAMD 279
+ + ++D++S G VL ++ G D
Sbjct: 214 LFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYD 247
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 96/220 (43%), Gaps = 14/220 (6%)
Query: 71 TDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGE--KEFLVEVLMLSLMRH 128
TD ++ +G+G F V + TG A K ++ ++ E + L++H
Sbjct: 3 TDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 129 PNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEY 188
N+V L +E LV++ + G L + ++ ++ + + + LE
Sbjct: 63 SNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAR-------EYYSEADASHCIQQILEA 115
Query: 189 LHNKADPPVIYRDLKAGNILLG---KGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYC 245
+ + V++RDLK N+LL KG KL+DFGLA GD+ GT GY
Sbjct: 116 VLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLA-IEVQGDQQ-AWFGFAGTPGYL 173
Query: 246 APEYATTGKLTAKSDIFSFGVVLLELITGRPAMDDSQGHE 285
+PE DI++ GV+L L+ G P D H+
Sbjct: 174 SPEVLRKEAYGKPVDIWACGVILYILLVGYPPFWDEDQHK 213
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 104/247 (42%), Gaps = 28/247 (11%)
Query: 40 PARRNT--LDDTLSAHENKNKENTFTYRQLVAATDNFKDTNFLGQGGFGAVYKGKLAETG 97
PA R +D+ LS + K+ R L ++++ +G+G FG V + T
Sbjct: 39 PALRKNKNIDNFLSRY----KDTINKIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTR 94
Query: 98 QVVAVKQLDDTGFQGEKE-----FLVEVLMLSLMRHPNLVHLIGYCAEGTQRLLVYEYMP 152
+V A+K L + F+ K F E +++ P +V L + +V EYMP
Sbjct: 95 KVYAMKLL--SKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMP 152
Query: 153 LGSLEDHLLGL-TPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGK 211
G L + + PE + + +A A + ++H RD+K N+LL K
Sbjct: 153 GGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIH---------RDVKPDNMLLDK 203
Query: 212 GFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATT----GKLTAKSDIFSFGVV 267
H KL+DFG T V GT Y +PE + G + D +S GV
Sbjct: 204 SGHLKLADFGTCMKMNKEGMVRCDTAV-GTPDYISPEVLKSQGGDGYYGRECDWWSVGVF 262
Query: 268 LLELITG 274
L E++ G
Sbjct: 263 LYEMLVG 269
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 91/200 (45%), Gaps = 13/200 (6%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFL-VEVLMLSLMRHPNLVHLIGYC 138
LG G FG V+ + +G +K ++ Q E + E+ +L + HPN++ +
Sbjct: 30 LGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVF 89
Query: 139 AEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVI 198
+ +V E G L + ++ K L ++ L Y H++ V+
Sbjct: 90 EDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQH---VV 146
Query: 199 YRDLKAGNILLGKGFHP----KLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTGK 254
++DLK NIL + P K+ DFGLA+ + + S T GT Y APE
Sbjct: 147 HKDLKPENILF-QDTSPHSPIKIIDFGLAELFKSDEHS---TNAAGTALYMAPE-VFKRD 201
Query: 255 LTAKSDIFSFGVVLLELITG 274
+T K DI+S GVV+ L+TG
Sbjct: 202 VTFKCDIWSAGVVMYFLLTG 221
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 104/247 (42%), Gaps = 28/247 (11%)
Query: 40 PARRNT--LDDTLSAHENKNKENTFTYRQLVAATDNFKDTNFLGQGGFGAVYKGKLAETG 97
PA R +D+ LS + K+ R L ++++ +G+G FG V + T
Sbjct: 44 PALRKNKNIDNFLSRY----KDTINKIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTR 99
Query: 98 QVVAVKQLDDTGFQGEKE-----FLVEVLMLSLMRHPNLVHLIGYCAEGTQRLLVYEYMP 152
+V A+K L + F+ K F E +++ P +V L + +V EYMP
Sbjct: 100 KVYAMKLL--SKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMP 157
Query: 153 LGSLEDHLLGL-TPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGK 211
G L + + PE + + +A A + ++H RD+K N+LL K
Sbjct: 158 GGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIH---------RDVKPDNMLLDK 208
Query: 212 GFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATT----GKLTAKSDIFSFGVV 267
H KL+DFG T V GT Y +PE + G + D +S GV
Sbjct: 209 SGHLKLADFGTCMKMNKEGMVRCDTAV-GTPDYISPEVLKSQGGDGYYGRECDWWSVGVF 267
Query: 268 LLELITG 274
L E++ G
Sbjct: 268 LYEMLVG 274
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 98/205 (47%), Gaps = 23/205 (11%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQL----DDTGFQGEKEFLVEVLMLSLMRHPNLVHLI 135
+G+G +G VYK + G+ A+K++ +D G + E+ +L ++H N+V L
Sbjct: 10 IGEGTYGVVYKAQ-NNYGETFALKKIRLEKEDEGIPSTT--IREISILKELKHSNIVKLY 66
Query: 136 GYCAEGTQRLLVYEYMP--LGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKA 193
+ +LV+E++ L L D G L+ T G+ Y H++
Sbjct: 67 DVIHTKKRLVLVFEHLDQDLKKLLDVCEG------GLESVTAKSFLLQLLNGIAYCHDRR 120
Query: 194 DPPVIYRDLKAGNILLGKGFHPKLSDFGLAK-FGPTGDKSHVSTRVMGTHGYCAPEYAT- 251
V++RDLK N+L+ + K++DFGLA+ FG K T + T Y AP+
Sbjct: 121 ---VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRK---YTHEIVTLWYRAPDVLMG 174
Query: 252 TGKLTAKSDIFSFGVVLLELITGRP 276
+ K + DI+S G + E++ G P
Sbjct: 175 SKKYSTTIDIWSVGCIFAEMVNGTP 199
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 99/224 (44%), Gaps = 29/224 (12%)
Query: 73 NFKDTNFLGQGGFGAVY--KGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPN 130
+F+ LG+GGFG V+ K K+ + + +L + EK + EV L+ + HP
Sbjct: 6 DFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREK-VMREVKALAKLEHPG 64
Query: 131 LVHLIGYCAEG--TQRLL-----VYEYMPLG-----SLEDHLLGLTPEMKPLDWNTRMKI 178
+V E T++L VY Y+ + +L+D + G ++ + + + I
Sbjct: 65 IVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRC-TIEERERSVCLHI 123
Query: 179 AAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRV 238
A +E+LH+K +++RDLK NI K+ DFGL ++
Sbjct: 124 FLQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTP 180
Query: 239 M----------GTHGYCAPEYATTGKLTAKSDIFSFGVVLLELI 272
M GT Y +PE + K DIFS G++L EL+
Sbjct: 181 MPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 109/247 (44%), Gaps = 28/247 (11%)
Query: 40 PARRNT--LDDTLSAHENKNKENTFTYRQLVAATDNFKDTNFLGQGGFGAVYKGKLAETG 97
PA R +D+ L+ +E K+ R L +++ +G+G FG V + +
Sbjct: 45 PALRKNKNIDNFLNRYEKIVKK----IRGLQMKAEDYDVVKVIGRGAFGEVQLVRHKASQ 100
Query: 98 QVVAVKQLDDTGFQGEKE-----FLVEVLMLSLMRHPNLVHLIGYCAEGTQRLLVYEYMP 152
+V A+K L + F+ K F E +++ P +V L + +V EYMP
Sbjct: 101 KVYAMKLL--SKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMP 158
Query: 153 LGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKG 212
G L + + K + T A L+ +H+ +I+RD+K N+LL K
Sbjct: 159 GGDLVNLMSNYDVPEKWAKFYT-----AEVVLALDAIHSMG---LIHRDVKPDNMLLDKH 210
Query: 213 FHPKLSDFGLA-KFGPTGDKSHVSTRVMGTHGYCAPEYATT----GKLTAKSDIFSFGVV 267
H KL+DFG K TG H T V GT Y +PE + G + D +S GV
Sbjct: 211 GHLKLADFGTCMKMDETG-MVHCDTAV-GTPDYISPEVLKSQGGDGYYGRECDWWSVGVF 268
Query: 268 LLELITG 274
L E++ G
Sbjct: 269 LFEMLVG 275
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 98/206 (47%), Gaps = 25/206 (12%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQL----DDTGFQGEKEFLVEVLMLSLMRHPNLVHLI 135
+G+G +G VYK + G+ A+K++ +D G + E+ +L ++H N+V L
Sbjct: 10 IGEGTYGVVYKAQ-NNYGETFALKKIRLEKEDEGIPSTT--IREISILKELKHSNIVKLY 66
Query: 136 GYCAEGTQRLLVYEYMP--LGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKA 193
+ +LV+E++ L L D G L+ T G+ Y H++
Sbjct: 67 DVIHTKKRLVLVFEHLDQDLKKLLDVCEG------GLESVTAKSFLLQLLNGIAYCHDRR 120
Query: 194 DPPVIYRDLKAGNILLGKGFHPKLSDFGLAK-FG-PTGDKSHVSTRVMGTHGYCAPEYAT 251
V++RDLK N+L+ + K++DFGLA+ FG P +H T Y AP+
Sbjct: 121 ---VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV----TLWYRAPDVLM 173
Query: 252 -TGKLTAKSDIFSFGVVLLELITGRP 276
+ K + DI+S G + E++ G P
Sbjct: 174 GSKKYSTTIDIWSVGCIFAEMVNGTP 199
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 110/241 (45%), Gaps = 44/241 (18%)
Query: 57 NKENTFTYRQLVAAT-----DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQ 111
++E YRQ + T + +++ + +G G +G+V +TG VAVK+L FQ
Sbjct: 2 SQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQ 60
Query: 112 G---EKEFLVEVLMLSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLED--------HL 160
K E+ +L M+H N++ L+ + P SLE+ HL
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHL 108
Query: 161 LG-----LTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHP 215
+G + K D + + I RGL+Y+H+ AD +I+RDLK N+ + +
Sbjct: 109 MGADLNNIVKCQKLTDDHVQFLIYQ-ILRGLKYIHS-AD--IIHRDLKPSNLAVNEDCEL 164
Query: 216 KLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTG-KLTAKSDIFSFGVVLLELITG 274
K+ FGLA+ +V+TR Y APE DI+S G ++ EL+TG
Sbjct: 165 KILGFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
Query: 275 R 275
R
Sbjct: 220 R 220
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 104/247 (42%), Gaps = 28/247 (11%)
Query: 40 PARRNT--LDDTLSAHENKNKENTFTYRQLVAATDNFKDTNFLGQGGFGAVYKGKLAETG 97
PA R +D+ LS + K+ R L ++++ +G+G FG V + T
Sbjct: 44 PALRKNKNIDNFLSRY----KDTINKIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTR 99
Query: 98 QVVAVKQLDDTGFQGEKE-----FLVEVLMLSLMRHPNLVHLIGYCAEGTQRLLVYEYMP 152
+V A+K L + F+ K F E +++ P +V L + +V EYMP
Sbjct: 100 KVYAMKLL--SKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMP 157
Query: 153 LGSLEDHLLGL-TPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGK 211
G L + + PE + + +A A + ++H RD+K N+LL K
Sbjct: 158 GGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIH---------RDVKPDNMLLDK 208
Query: 212 GFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATT----GKLTAKSDIFSFGVV 267
H KL+DFG T V GT Y +PE + G + D +S GV
Sbjct: 209 SGHLKLADFGTCMKMNKEGMVRCDTAV-GTPDYISPEVLKSQGGDGYYGRECDWWSVGVF 267
Query: 268 LLELITG 274
L E++ G
Sbjct: 268 LYEMLVG 274
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 112/241 (46%), Gaps = 44/241 (18%)
Query: 57 NKENTFTYRQLVAAT-----DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQ 111
++E YRQ + T + +++ + +G G +G+V +TG VAVK+L FQ
Sbjct: 2 SQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQ 60
Query: 112 G---EKEFLVEVLMLSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLED--------HL 160
K E+ +L M+H N++ L+ + P SLE+ HL
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHL 108
Query: 161 LG-----LTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHP 215
+G + K D + + I RGL+Y+H+ AD +I+RDLK N+ + +
Sbjct: 109 MGADLNNIVKCQKLTDDHVQFLIYQ-ILRGLKYIHS-AD--IIHRDLKPSNLAVNEDCEL 164
Query: 216 KLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTGKLTAKS-DIFSFGVVLLELITG 274
K+ D GLA+ +V+TR Y APE ++ DI+S G ++ EL+TG
Sbjct: 165 KILDAGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
Query: 275 R 275
R
Sbjct: 220 R 220
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 98/206 (47%), Gaps = 25/206 (12%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQL----DDTGFQGEKEFLVEVLMLSLMRHPNLVHLI 135
+G+G +G VYK + G+ A+K++ +D G + E+ +L ++H N+V L
Sbjct: 10 IGEGTYGVVYKAQ-NNYGETFALKKIRLEKEDEGIPSTT--IREISILKELKHSNIVKLY 66
Query: 136 GYCAEGTQRLLVYEYMP--LGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKA 193
+ +LV+E++ L L D G L+ T G+ Y H++
Sbjct: 67 DVIHTKKRLVLVFEHLDQDLKKLLDVCEG------GLESVTAKSFLLQLLNGIAYCHDRR 120
Query: 194 DPPVIYRDLKAGNILLGKGFHPKLSDFGLAK-FG-PTGDKSHVSTRVMGTHGYCAPEYAT 251
V++RDLK N+L+ + K++DFGLA+ FG P +H T Y AP+
Sbjct: 121 ---VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV----TLWYRAPDVLM 173
Query: 252 -TGKLTAKSDIFSFGVVLLELITGRP 276
+ K + DI+S G + E++ G P
Sbjct: 174 GSKKYSTTIDIWSVGCIFAEMVNGAP 199
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 88/213 (41%), Gaps = 27/213 (12%)
Query: 80 LGQGGFGAVY-----KGKLAETGQVVAVKQLDDTGFQGE--------KEFLVEVLMLSLM 126
LG G +G V G + +V+ Q D + + +E E+ +L +
Sbjct: 44 LGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSL 103
Query: 127 RHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGL 186
HPN++ L + LV E+ G L + ++ D I G+
Sbjct: 104 DHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIIN----RHKFDECDAANIMKQILSGI 159
Query: 187 EYLHNKADPPVIYRDLKAGNILLGKG---FHPKLSDFGLAKFGPTGDKSHVSTRVMGTHG 243
YLH +++RD+K NILL + K+ DFGL+ F K + +GT
Sbjct: 160 CYLHK---HNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFS---KDYKLRDRLGTAY 213
Query: 244 YCAPEYATTGKLTAKSDIFSFGVVLLELITGRP 276
Y APE K K D++S GV++ L+ G P
Sbjct: 214 YIAPE-VLKKKYNEKCDVWSCGVIMYILLCGYP 245
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 110/241 (45%), Gaps = 44/241 (18%)
Query: 57 NKENTFTYRQLVAAT-----DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQ 111
++E YRQ + T + +++ + +G G +G+V +TG VAVK+L FQ
Sbjct: 2 SQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQ 60
Query: 112 G---EKEFLVEVLMLSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLED--------HL 160
K E+ +L M+H N++ L+ + P SLE+ HL
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHL 108
Query: 161 LG-----LTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHP 215
+G + K D + + I RGL+Y+H+ AD +I+RDLK N+ + +
Sbjct: 109 MGADLNNIVKCQKLTDDHVQFLIYQ-ILRGLKYIHS-AD--IIHRDLKPSNLAVNEDCEL 164
Query: 216 KLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTG-KLTAKSDIFSFGVVLLELITG 274
K+ D GLA+ +V+TR Y APE DI+S G ++ EL+TG
Sbjct: 165 KILDRGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
Query: 275 R 275
R
Sbjct: 220 R 220
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 90/210 (42%), Gaps = 14/210 (6%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGE--KEFLVEVLMLSLMRHPNLVHLIGY 137
LG+G F V + GQ A K ++ ++ E + L++HPN+V L
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 89
Query: 138 CAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPV 197
+E L+++ + G L + ++ ++ + + + LE + + V
Sbjct: 90 ISEEGHHYLIFDLVTGGELFEDIVAR-------EYYSEADASHCIQQILEAVLHCHQMGV 142
Query: 198 IYRDLKAGNILLG---KGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTGK 254
++RDLK N+LL KG KL+DFGLA + GT GY +PE
Sbjct: 143 VHRDLKPENLLLASKLKGAAVKLADFGLAI--EVEGEQQAWFGFAGTPGYLSPEVLRKDP 200
Query: 255 LTAKSDIFSFGVVLLELITGRPAMDDSQGH 284
D+++ GV+L L+ G P D H
Sbjct: 201 YGKPVDLWACGVILYILLVGYPPFWDEDQH 230
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 98/221 (44%), Gaps = 26/221 (11%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTG---FQGEK------EFLVEVLM 122
+N++ LG+G V + T + AVK +D TG F E+ L EV +
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 76
Query: 123 LSLMR-HPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAG 181
L + HPN++ L T LV++ M G L D+L T ++ + TR KI
Sbjct: 77 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL---TEKVTLSEKETR-KIMRA 132
Query: 182 AARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGT 241
+ LH +++RDLK NILL + KL+DFG + G+K V GT
Sbjct: 133 LLEVICALHKLN---IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLR---EVCGT 186
Query: 242 HGYCAPEYATTGK------LTAKSDIFSFGVVLLELITGRP 276
Y APE + D++S GV++ L+ G P
Sbjct: 187 PSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSP 227
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 98/221 (44%), Gaps = 26/221 (11%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTG---FQGEK------EFLVEVLM 122
+N++ LG+G V + T + AVK +D TG F E+ L EV +
Sbjct: 4 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 63
Query: 123 LSLMR-HPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAG 181
L + HPN++ L T LV++ M G L D+L T ++ + TR KI
Sbjct: 64 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL---TEKVTLSEKETR-KIMRA 119
Query: 182 AARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGT 241
+ LH +++RDLK NILL + KL+DFG + G+K V GT
Sbjct: 120 LLEVICALHKLN---IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLR---EVCGT 173
Query: 242 HGYCAPEYATTGK------LTAKSDIFSFGVVLLELITGRP 276
Y APE + D++S GV++ L+ G P
Sbjct: 174 PSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSP 214
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 98/221 (44%), Gaps = 26/221 (11%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTG---FQGEK------EFLVEVLM 122
+N++ LG+G V + T + AVK +D TG F E+ L EV +
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 76
Query: 123 LSLMR-HPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAG 181
L + HPN++ L T LV++ M G L D+L T ++ + TR KI
Sbjct: 77 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL---TEKVTLSEKETR-KIMRA 132
Query: 182 AARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGT 241
+ LH +++RDLK NILL + KL+DFG + G+K V GT
Sbjct: 133 LLEVICALHKLN---IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLR---SVCGT 186
Query: 242 HGYCAPEYATTGK------LTAKSDIFSFGVVLLELITGRP 276
Y APE + D++S GV++ L+ G P
Sbjct: 187 PSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSP 227
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 110/241 (45%), Gaps = 44/241 (18%)
Query: 57 NKENTFTYRQLVAAT-----DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQ 111
++E YRQ + T + +++ + +G G +G+V +TG VAVK+L FQ
Sbjct: 2 SQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQ 60
Query: 112 G---EKEFLVEVLMLSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLED--------HL 160
K E+ +L M+H N++ L+ + P SLE+ HL
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHL 108
Query: 161 LG-----LTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHP 215
+G + K D + + I RGL+Y+H+ AD +I+RDLK N+ + +
Sbjct: 109 MGADLNNIVKCQKLTDDHVQFLIYQ-ILRGLKYIHS-AD--IIHRDLKPSNLAVNEDCEL 164
Query: 216 KLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTG-KLTAKSDIFSFGVVLLELITG 274
K+ D GLA+ +V+TR Y APE DI+S G ++ EL+TG
Sbjct: 165 KILDGGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
Query: 275 R 275
R
Sbjct: 220 R 220
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 99/231 (42%), Gaps = 43/231 (18%)
Query: 73 NFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLV 132
+F++ LGQG FG V K + A + A+K++ T + L EV++L+ + H
Sbjct: 7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE-EKLSTILSEVMLLASLNHQ--- 62
Query: 133 HLIGYCAEGTQR----------------LLVYEYMPLGSLED--HLLGLTPEMKPLDWNT 174
+++ Y A +R + EY +L D H L + W
Sbjct: 63 YVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEY-WRL 121
Query: 175 RMKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAK-FGPTGD--- 230
+I L Y+H++ +I+RDLK NI + + + K+ DFGLAK + D
Sbjct: 122 FRQIL----EALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILK 174
Query: 231 --------KSHVSTRVMGTHGYCAPEYAT-TGKLTAKSDIFSFGVVLLELI 272
S T +GT Y A E TG K D++S G++ E+I
Sbjct: 175 LDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 91/214 (42%), Gaps = 21/214 (9%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEK------EFLVEVLMLSLMRHPNLVH 133
LG G F V K + TG A K + + + E EV +L + HPN++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIIT 79
Query: 134 LIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKA 193
L T +L+ E + G L D L + + L G+ YLH K
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFL----AQKESLSEEEATSFIKQILDGVNYLHTK- 134
Query: 194 DPPVIYRDLKAGNI-LLGKGF---HPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEY 249
+ + DLK NI LL K H KL DFGLA G + + GT + APE
Sbjct: 135 --KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF---KNIFGTPEFVAPEI 189
Query: 250 ATTGKLTAKSDIFSFGVVLLELITG-RPAMDDSQ 282
L ++D++S GV+ L++G P + D++
Sbjct: 190 VNYEPLGLEADMWSIGVITYILLSGASPFLGDTK 223
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 94/215 (43%), Gaps = 12/215 (5%)
Query: 71 TDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSL--MRH 128
D+ + LG+G +G V K + +GQ+ AVK++ T E++ L+ L +S +
Sbjct: 33 ADDLEPIXELGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLDISXRTVDC 92
Query: 129 PNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEY 188
P V G + E + SL+ + + + + + KIA + LE+
Sbjct: 93 PFTVTFYGALFREGDVWICXE-LXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEH 151
Query: 189 LHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPE 248
LH+K VI+RD+K N+L+ K DFG++ + + G Y APE
Sbjct: 152 LHSKLS--VIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDA---GCKPYXAPE 206
Query: 249 YA----TTGKLTAKSDIFSFGVVLLELITGRPAMD 279
+ KSDI+S G+ +EL R D
Sbjct: 207 RINPELNQKGYSVKSDIWSLGITXIELAILRFPYD 241
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 93/219 (42%), Gaps = 14/219 (6%)
Query: 71 TDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGE--KEFLVEVLMLSLMRH 128
T+ ++ LG+G F V + GQ A ++ ++ E + L++H
Sbjct: 10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKH 69
Query: 129 PNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEY 188
PN+V L +E L+++ + G L + ++ ++ + + + LE
Sbjct: 70 PNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAR-------EYYSEADASHCIQQILEA 122
Query: 189 LHNKADPPVIYRDLKAGNILLG---KGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYC 245
+ + V++R+LK N+LL KG KL+DFGLA + GT GY
Sbjct: 123 VLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAI--EVEGEQQAWFGFAGTPGYL 180
Query: 246 APEYATTGKLTAKSDIFSFGVVLLELITGRPAMDDSQGH 284
+PE D+++ GV+L L+ G P D H
Sbjct: 181 SPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQH 219
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 90/215 (41%), Gaps = 13/215 (6%)
Query: 68 VAATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGE-----KEFLVEVLM 122
V D ++ +G+G F V + ETGQ AVK +D F ++ E +
Sbjct: 20 VLFEDVYELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASI 79
Query: 123 LSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGA 182
+++HP++V L+ + +V+E+M L ++
Sbjct: 80 CHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQI 139
Query: 183 ARGLEYLHNKADPPVIYRDLKAGNILLGKGFHP---KLSDFGLAKFGPTGDKSHVSTRVM 239
L Y H D +I+RD+K N+LL + KL DFG+A G+ V+ +
Sbjct: 140 LEALRYCH---DNNIIHRDVKPENVLLASKENSAPVKLGDFGVAI--QLGESGLVAGGRV 194
Query: 240 GTHGYCAPEYATTGKLTAKSDIFSFGVVLLELITG 274
GT + APE D++ GV+L L++G
Sbjct: 195 GTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 91/198 (45%), Gaps = 13/198 (6%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLVHLIGYCA 139
LG G FG V++ TG+V K ++ + E+ +++ + HP L++L
Sbjct: 59 LGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFE 118
Query: 140 EGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIY 199
+ + +L+ E++ G L D + +M + M+ A GL+++H + +++
Sbjct: 119 DKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMR---QACEGLKHMHEHS---IVH 172
Query: 200 RDLKAGNILL--GKGFHPKLSDFGLA-KFGPTGDKSHVSTRVMGTHGYCAPEYATTGKLT 256
D+K NI+ K K+ DFGLA K P + T + APE +
Sbjct: 173 LDIKPENIMCETKKASSVKIIDFGLATKLNP----DEIVKVTTATAEFAAPEIVDREPVG 228
Query: 257 AKSDIFSFGVVLLELITG 274
+D+++ GV+ L++G
Sbjct: 229 FYTDMWAIGVLGYVLLSG 246
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 92/215 (42%), Gaps = 16/215 (7%)
Query: 64 YRQLVAATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLML 123
+R + TD ++ +G G + + T AVK +D + +E +E+L L
Sbjct: 14 HRNSIQFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEE--IEIL-L 70
Query: 124 SLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAA 183
+HPN++ L +G +V E M G L D +L K +
Sbjct: 71 RYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKIL----RQKFFSEREASAVLFTIT 126
Query: 184 RGLEYLHNKADPPVIYRDLKAGNILL----GKGFHPKLSDFGLAKFGPTGDKSHVSTRVM 239
+ +EYLH + V++RDLK NIL G ++ DFG AK ++ +
Sbjct: 127 KTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAK--QLRAENGLLMTPC 181
Query: 240 GTHGYCAPEYATTGKLTAKSDIFSFGVVLLELITG 274
T + APE A DI+S GV+L ++TG
Sbjct: 182 YTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTG 216
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 98/224 (43%), Gaps = 22/224 (9%)
Query: 71 TDNFKDT-NFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEK------EFLVEVLML 123
D++ DT LG G F V K + TG A K + + + + EV +L
Sbjct: 9 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSIL 68
Query: 124 SLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAA 183
++HPN++ L T +L+ E + G L D L E + L +
Sbjct: 69 KEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL----AEKESLTEEEATEFLKQIL 124
Query: 184 RGLEYLHNKADPPVIYRDLKAGNILLGKGFHPK----LSDFGLAKFGPTGDKSHVSTRVM 239
G+ YLH+ + + DLK NI+L PK + DFGLA G++ +
Sbjct: 125 NGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIF 178
Query: 240 GTHGYCAPEYATTGKLTAKSDIFSFGVVLLELITG-RPAMDDSQ 282
GT + APE L ++D++S GV+ L++G P + D++
Sbjct: 179 GTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK 222
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 86/213 (40%), Gaps = 19/213 (8%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMR-HPNLVHLIGYC 138
LG+G F K ++ Q AVK + + E E+ L L HPN+V L
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKIISK---RMEANTQKEITALKLCEGHPNIVKLHEVF 75
Query: 139 AEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVI 198
+ LV E + G L + + + K I + ++H D V+
Sbjct: 76 HDQLHTFLVMELLNGGELFERI----KKKKHFSETEASYIMRKLVSAVSHMH---DVGVV 128
Query: 199 YRDLKAGNILL---GKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTGKL 255
+RDLK N+L K+ DFG A+ P D + T H Y APE
Sbjct: 129 HRDLKPENLLFTDENDNLEIKIIDFGFARLKPP-DNQPLKTPCFTLH-YAAPELLNQNGY 186
Query: 256 TAKSDIFSFGVVLLELITGRPAMDDSQGHERML 288
D++S GV+L +++G+ Q H+R L
Sbjct: 187 DESCDLWSLGVILYTMLSGQVPF---QSHDRSL 216
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 96/214 (44%), Gaps = 20/214 (9%)
Query: 72 DNFKDTNFLGQGGFGAVY---KGKLAETGQVVAVKQLDDTGF----QGEKEFLVEVLMLS 124
+NF+ LG G +G V+ K +TG++ A+K L + + E +L
Sbjct: 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLE 113
Query: 125 LMRHPNLVHLIGYCAEGTQRL-LVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGA- 182
+R + + Y + +L L+ +Y+ G L HL + ++I G
Sbjct: 114 HIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHL-----SQRERFTEHEVQIYVGEI 168
Query: 183 ARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTH 242
LE+LH +IYRD+K NILL H L+DFGL+K D++ + GT
Sbjct: 169 VLALEHLHKLG---IIYRDIKLENILLDSNGHVVLTDFGLSK-EFVADETERAYDFCGTI 224
Query: 243 GYCAPEYATTGKL--TAKSDIFSFGVVLLELITG 274
Y AP+ G D +S GV++ EL+TG
Sbjct: 225 EYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTG 258
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 104/261 (39%), Gaps = 44/261 (16%)
Query: 35 ERQETPARRNTLDDTLSAHENKNKENTFTYRQLVAATDNFKDTNFLGQGGFGAVYKGKLA 94
E +P RR + + + K T +Q+ ++F+ +G+G FG V KL
Sbjct: 40 ECNNSPLRR---EKNILEYLEWAKPFTSKVKQMRLHREDFEILKVIGRGAFGEVAVVKLK 96
Query: 95 ETGQVVAVKQLDD---------TGFQGEKEFLVE-------VLMLSLMRHPNLVHLIGYC 138
+V A+K L+ F+ E++ LV L + NL ++ Y
Sbjct: 97 NADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYY 156
Query: 139 AEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVI 198
G L L ED L PE + M IA + L Y+H
Sbjct: 157 VGGDLLTL------LSKFEDRL----PEEMARFYLAEMVIAIDSVHQLHYVH-------- 198
Query: 199 YRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATT-----G 253
RD+K NIL+ H +L+DFG + D + S+ +GT Y +PE G
Sbjct: 199 -RDIKPDNILMDMNGHIRLADFG-SCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKG 256
Query: 254 KLTAKSDIFSFGVVLLELITG 274
+ + D +S GV + E++ G
Sbjct: 257 RYGPECDWWSLGVCMYEMLYG 277
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 93/212 (43%), Gaps = 37/212 (17%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQG---EKEFLVEVLMLSLMRHPNLVHLIG 136
+G G +G+V A Q VAVK+L FQ + E+ +L ++H N++ L+
Sbjct: 28 VGSGAYGSVCSAYDARLRQKVAVKKLS-RPFQSLIHARRTYRELRLLKHLKHENVIGLLD 86
Query: 137 YCAEGTQRLLVYEYMPLGSLEDHL-LGLTPEMKPLDWNTRMKIAAGA-----------AR 184
+ P S+ED + L + D N +K A + R
Sbjct: 87 V------------FTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLR 134
Query: 185 GLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGY 244
GL+Y+H+ +I+RDLK N+ + + ++ DFGLA+ +V+TR Y
Sbjct: 135 GLKYIHSAG---IIHRDLKPSNVAVNEDCELRILDFGLARQADEEMTGYVATR-----WY 186
Query: 245 CAPEYATTG-KLTAKSDIFSFGVVLLELITGR 275
APE DI+S G ++ EL+ G+
Sbjct: 187 RAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 98/224 (43%), Gaps = 22/224 (9%)
Query: 71 TDNFKDT-NFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEK------EFLVEVLML 123
D++ DT LG G F V K + TG A K + + + + EV +L
Sbjct: 8 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSIL 67
Query: 124 SLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAA 183
++HPN++ L T +L+ E + G L D L E + L +
Sbjct: 68 KEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL----AEKESLTEEEATEFLKQIL 123
Query: 184 RGLEYLHNKADPPVIYRDLKAGNILLGKGFHPK----LSDFGLAKFGPTGDKSHVSTRVM 239
G+ YLH+ + + DLK NI+L PK + DFGLA G++ +
Sbjct: 124 NGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIF 177
Query: 240 GTHGYCAPEYATTGKLTAKSDIFSFGVVLLELITG-RPAMDDSQ 282
GT + APE L ++D++S GV+ L++G P + D++
Sbjct: 178 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK 221
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 98/224 (43%), Gaps = 22/224 (9%)
Query: 71 TDNFKDT-NFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEK------EFLVEVLML 123
D++ DT LG G F V K + TG A K + + + + EV +L
Sbjct: 9 VDDYYDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSIL 68
Query: 124 SLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAA 183
++HPN++ L T +L+ E + G L D L E + L +
Sbjct: 69 KEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL----AEKESLTEEEATEFLKQIL 124
Query: 184 RGLEYLHNKADPPVIYRDLKAGNILLGKGFHPK----LSDFGLAKFGPTGDKSHVSTRVM 239
G+ YLH+ + + DLK NI+L PK + DFGLA G++ +
Sbjct: 125 NGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIF 178
Query: 240 GTHGYCAPEYATTGKLTAKSDIFSFGVVLLELITG-RPAMDDSQ 282
GT + APE L ++D++S GV+ L++G P + D++
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK 222
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 98/224 (43%), Gaps = 22/224 (9%)
Query: 71 TDNFKDT-NFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEK------EFLVEVLML 123
D++ DT LG G F V K + TG A K + + + + EV +L
Sbjct: 8 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSIL 67
Query: 124 SLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAA 183
++HPN++ L T +L+ E + G L D L E + L +
Sbjct: 68 KEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL----AEKESLTEEEATEFLKQIL 123
Query: 184 RGLEYLHNKADPPVIYRDLKAGNILLGKGFHPK----LSDFGLAKFGPTGDKSHVSTRVM 239
G+ YLH+ + + DLK NI+L PK + DFGLA G++ +
Sbjct: 124 NGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIF 177
Query: 240 GTHGYCAPEYATTGKLTAKSDIFSFGVVLLELITG-RPAMDDSQ 282
GT + APE L ++D++S GV+ L++G P + D++
Sbjct: 178 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK 221
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 98/224 (43%), Gaps = 22/224 (9%)
Query: 71 TDNFKDT-NFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEK------EFLVEVLML 123
D++ DT LG G F V K + TG A K + + + + EV +L
Sbjct: 9 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSIL 68
Query: 124 SLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAA 183
++HPN++ L T +L+ E + G L D L E + L +
Sbjct: 69 KEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL----AEKESLTEEEATEFLKQIL 124
Query: 184 RGLEYLHNKADPPVIYRDLKAGNILLGKGFHPK----LSDFGLAKFGPTGDKSHVSTRVM 239
G+ YLH+ + + DLK NI+L PK + DFGLA G++ +
Sbjct: 125 NGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIF 178
Query: 240 GTHGYCAPEYATTGKLTAKSDIFSFGVVLLELITG-RPAMDDSQ 282
GT + APE L ++D++S GV+ L++G P + D++
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK 222
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 98/224 (43%), Gaps = 22/224 (9%)
Query: 71 TDNFKDT-NFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEK------EFLVEVLML 123
D++ DT LG G F V K + TG A K + + + + EV +L
Sbjct: 9 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSIL 68
Query: 124 SLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAA 183
++HPN++ L T +L+ E + G L D L E + L +
Sbjct: 69 KEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL----AEKESLTEEEATEFLKQIL 124
Query: 184 RGLEYLHNKADPPVIYRDLKAGNILLGKGFHPK----LSDFGLAKFGPTGDKSHVSTRVM 239
G+ YLH+ + + DLK NI+L PK + DFGLA G++ +
Sbjct: 125 NGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIF 178
Query: 240 GTHGYCAPEYATTGKLTAKSDIFSFGVVLLELITG-RPAMDDSQ 282
GT + APE L ++D++S GV+ L++G P + D++
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK 222
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 93/212 (43%), Gaps = 37/212 (17%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQG---EKEFLVEVLMLSLMRHPNLVHLIG 136
+G G +G+V A Q VAVK+L FQ + E+ +L ++H N++ L+
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLSRP-FQSLIHARRTYRELRLLKHLKHENVIGLLD 94
Query: 137 YCAEGTQRLLVYEYMPLGSLEDHL-LGLTPEMKPLDWNTRMKIAAGA-----------AR 184
+ P S+ED + L + D N +K A + R
Sbjct: 95 V------------FTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLR 142
Query: 185 GLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGY 244
GL+Y+H+ +I+RDLK N+ + + ++ DFGLA+ +V+TR Y
Sbjct: 143 GLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATR-----WY 194
Query: 245 CAPEYATTG-KLTAKSDIFSFGVVLLELITGR 275
APE DI+S G ++ EL+ G+
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 98/224 (43%), Gaps = 22/224 (9%)
Query: 71 TDNFKDT-NFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEK------EFLVEVLML 123
D++ DT LG G F V K + TG A K + + + + EV +L
Sbjct: 9 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSIL 68
Query: 124 SLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAA 183
++HPN++ L T +L+ E + G L D L E + L +
Sbjct: 69 KEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL----AEKESLTEEEATEFLKQIL 124
Query: 184 RGLEYLHNKADPPVIYRDLKAGNILLGKGFHPK----LSDFGLAKFGPTGDKSHVSTRVM 239
G+ YLH+ + + DLK NI+L PK + DFGLA G++ +
Sbjct: 125 NGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIF 178
Query: 240 GTHGYCAPEYATTGKLTAKSDIFSFGVVLLELITG-RPAMDDSQ 282
GT + APE L ++D++S GV+ L++G P + D++
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK 222
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 110/256 (42%), Gaps = 49/256 (19%)
Query: 77 TNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEF-LVEVLMLSLMRHPNLVHLI 135
++ LGQG V++G+ +TG + A+K ++ F + + E +L + H N+V L
Sbjct: 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLF 73
Query: 136 GYCAEGTQR--LLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKA 193
E T R +L+ E+ P GSL +L L + + + G+ +L
Sbjct: 74 AIEEETTTRHKVLIMEFCPCGSLYT-VLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG 132
Query: 194 DPPVIYRDLKAGNILL-----GKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPE 248
+++R++K GNI+ G+ + KL+DFG A+ D+ VS + GT Y P+
Sbjct: 133 ---IVHRNIKPGNIMRVIGEDGQSVY-KLTDFGAAR-ELEDDEQFVS--LYGTEEYLHPD 185
Query: 249 YATTG--------KLTAKSDIFSFGV-----------------------VLLELITGRP- 276
K A D++S GV V+ ++ITG+P
Sbjct: 186 MYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPS 245
Query: 277 -AMDDSQGHERMLVDW 291
A+ Q E +DW
Sbjct: 246 GAISGVQKAENGPIDW 261
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 98/224 (43%), Gaps = 22/224 (9%)
Query: 71 TDNFKDT-NFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEK------EFLVEVLML 123
D++ DT LG G F V K + TG A K + + + + EV +L
Sbjct: 9 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSIL 68
Query: 124 SLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAA 183
++HPN++ L T +L+ E + G L D L E + L +
Sbjct: 69 KEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL----AEKESLTEEEATEFLKQIL 124
Query: 184 RGLEYLHNKADPPVIYRDLKAGNILLGKGFHPK----LSDFGLAKFGPTGDKSHVSTRVM 239
G+ YLH+ + + DLK NI+L PK + DFGLA G++ +
Sbjct: 125 NGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIF 178
Query: 240 GTHGYCAPEYATTGKLTAKSDIFSFGVVLLELITG-RPAMDDSQ 282
GT + APE L ++D++S GV+ L++G P + D++
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK 222
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 98/224 (43%), Gaps = 22/224 (9%)
Query: 71 TDNFKDT-NFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEK------EFLVEVLML 123
D++ DT LG G F V K + TG A K + + + + EV +L
Sbjct: 9 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSIL 68
Query: 124 SLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAA 183
++HPN++ L T +L+ E + G L D L E + L +
Sbjct: 69 KEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL----AEKESLTEEEATEFLKQIL 124
Query: 184 RGLEYLHNKADPPVIYRDLKAGNILLGKGFHPK----LSDFGLAKFGPTGDKSHVSTRVM 239
G+ YLH+ + + DLK NI+L PK + DFGLA G++ +
Sbjct: 125 NGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIF 178
Query: 240 GTHGYCAPEYATTGKLTAKSDIFSFGVVLLELITG-RPAMDDSQ 282
GT + APE L ++D++S GV+ L++G P + D++
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK 222
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 98/224 (43%), Gaps = 22/224 (9%)
Query: 71 TDNFKDT-NFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEK------EFLVEVLML 123
D++ DT LG G F V K + TG A K + + + + EV +L
Sbjct: 9 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSIL 68
Query: 124 SLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAA 183
++HPN++ L T +L+ E + G L D L E + L +
Sbjct: 69 KEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL----AEKESLTEEEATEFLKQIL 124
Query: 184 RGLEYLHNKADPPVIYRDLKAGNILLGKGFHPK----LSDFGLAKFGPTGDKSHVSTRVM 239
G+ YLH+ + + DLK NI+L PK + DFGLA G++ +
Sbjct: 125 NGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIF 178
Query: 240 GTHGYCAPEYATTGKLTAKSDIFSFGVVLLELITG-RPAMDDSQ 282
GT + APE L ++D++S GV+ L++G P + D++
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK 222
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 98/224 (43%), Gaps = 22/224 (9%)
Query: 71 TDNFKDT-NFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEK------EFLVEVLML 123
D++ DT LG G F V K + TG A K + + + + EV +L
Sbjct: 9 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSIL 68
Query: 124 SLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAA 183
++HPN++ L T +L+ E + G L D L E + L +
Sbjct: 69 KEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL----AEKESLTEEEATEFLKQIL 124
Query: 184 RGLEYLHNKADPPVIYRDLKAGNILLGKGFHPK----LSDFGLAKFGPTGDKSHVSTRVM 239
G+ YLH+ + + DLK NI+L PK + DFGLA G++ +
Sbjct: 125 NGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIF 178
Query: 240 GTHGYCAPEYATTGKLTAKSDIFSFGVVLLELITG-RPAMDDSQ 282
GT + APE L ++D++S GV+ L++G P + D++
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK 222
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 98/224 (43%), Gaps = 22/224 (9%)
Query: 71 TDNFKDT-NFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEK------EFLVEVLML 123
D++ DT LG G F V K + TG A K + + + + EV +L
Sbjct: 9 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSIL 68
Query: 124 SLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAA 183
++HPN++ L T +L+ E + G L D L E + L +
Sbjct: 69 KEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL----AEKESLTEEEATEFLKQIL 124
Query: 184 RGLEYLHNKADPPVIYRDLKAGNILLGKGFHPK----LSDFGLAKFGPTGDKSHVSTRVM 239
G+ YLH+ + + DLK NI+L PK + DFGLA G++ +
Sbjct: 125 NGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIF 178
Query: 240 GTHGYCAPEYATTGKLTAKSDIFSFGVVLLELITG-RPAMDDSQ 282
GT + APE L ++D++S GV+ L++G P + D++
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK 222
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 98/224 (43%), Gaps = 22/224 (9%)
Query: 71 TDNFKDT-NFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEK------EFLVEVLML 123
D++ DT LG G F V K + TG A K + + + + EV +L
Sbjct: 9 VDDYYDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSIL 68
Query: 124 SLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAA 183
++HPN++ L T +L+ E + G L D L E + L +
Sbjct: 69 KEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL----AEKESLTEEEATEFLKQIL 124
Query: 184 RGLEYLHNKADPPVIYRDLKAGNILLGKGFHPK----LSDFGLAKFGPTGDKSHVSTRVM 239
G+ YLH+ + + DLK NI+L PK + DFGLA G++ +
Sbjct: 125 NGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIF 178
Query: 240 GTHGYCAPEYATTGKLTAKSDIFSFGVVLLELITG-RPAMDDSQ 282
GT + APE L ++D++S GV+ L++G P + D++
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK 222
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 92/211 (43%), Gaps = 28/211 (13%)
Query: 80 LGQGGFGAVYKGKLAETGQV-------VAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLV 132
LGQG F ++KG E G V +K LD + F M+S + H +LV
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 133 HLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNK 192
G C G + +LV E++ GSL+ +L + L W ++++A A + +L
Sbjct: 76 LNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINIL-W--KLEVAKQLAAAMHFLEEN 132
Query: 193 ADPPVIYRDLKAGNILL--------GKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGY 244
+I+ ++ A NILL G KLSD G++ K + R+ +
Sbjct: 133 T---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISI--TVLPKDILQERI----PW 183
Query: 245 CAPEYATTGK-LTAKSDIFSFGVVLLELITG 274
PE K L +D +SFG L E+ +G
Sbjct: 184 VPPECIENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 95/212 (44%), Gaps = 37/212 (17%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQG---EKEFLVEVLMLSLMRHPNLVHLIG 136
+G G +G+V A Q VAVK+L FQ + E+ +L ++H N++ L+
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLSRP-FQSLIHARRTYRELRLLKHLKHENVIGLLD 94
Query: 137 YCAEGTQRLLVYEYMPLGSLEDHL-LGLTPEMKPLDWNTRMKIAAGA-----------AR 184
+ P S+ED + L + D N +K A + R
Sbjct: 95 V------------FTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQFLVYQLLR 142
Query: 185 GLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGY 244
GL+Y+H+ +I+RDLK N+ + + ++ DFGLA+ +V+TR Y
Sbjct: 143 GLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATR-----WY 194
Query: 245 CAPEYATTGKLTAKS-DIFSFGVVLLELITGR 275
APE ++ DI+S G ++ EL+ G+
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 92/204 (45%), Gaps = 11/204 (5%)
Query: 74 FKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGE---KEFLVEVLMLSLMRHPN 130
+++ +G G G V A + VA+K+L FQ + K E++++ ++ H N
Sbjct: 26 YQNLKPIGSGAQGIVVAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRELVLMKVVNHKN 84
Query: 131 LVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLH 190
++ L+ + + L D L +M+ LD + G+++LH
Sbjct: 85 IIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQME-LDHERMSYLLYQMLVGIKHLH 143
Query: 191 NKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYA 250
+ +I+RDLK NI++ K+ DFGLA+ T S + T + T Y APE
Sbjct: 144 SAG---IIHRDLKPSNIVVKSDATLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVI 197
Query: 251 TTGKLTAKSDIFSFGVVLLELITG 274
DI+S GV++ E+I G
Sbjct: 198 LGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 96/231 (41%), Gaps = 43/231 (18%)
Query: 73 NFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLV 132
+F++ LGQG FG V K + A + A+K++ T + L EV +L+ + H
Sbjct: 7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE-EKLSTILSEVXLLASLNHQ--- 62
Query: 133 HLIGYCAEGTQR----------------LLVYEYMPLGSLED--HLLGLTPEMKPLDWNT 174
+++ Y A +R + EY +L D H L + W
Sbjct: 63 YVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEY-WRL 121
Query: 175 RMKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAK-FGPTGD--- 230
+I L Y+H++ +I+R+LK NI + + + K+ DFGLAK + D
Sbjct: 122 FRQIL----EALSYIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILK 174
Query: 231 --------KSHVSTRVMGTHGYCAPEYAT-TGKLTAKSDIFSFGVVLLELI 272
S T +GT Y A E TG K D +S G++ E I
Sbjct: 175 LDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 98/224 (43%), Gaps = 22/224 (9%)
Query: 71 TDNFKDT-NFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEK------EFLVEVLML 123
D++ DT LG G F V K + TG A K + + + + EV +L
Sbjct: 9 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSIL 68
Query: 124 SLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAA 183
++HPN++ L T +L+ E + G L D L E + L +
Sbjct: 69 KEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFL----AEKESLTEEEATEFLKQIL 124
Query: 184 RGLEYLHNKADPPVIYRDLKAGNILLGKGFHPK----LSDFGLAKFGPTGDKSHVSTRVM 239
G+ YLH+ + + DLK NI+L PK + DFGLA G++ +
Sbjct: 125 NGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIF 178
Query: 240 GTHGYCAPEYATTGKLTAKSDIFSFGVVLLELITG-RPAMDDSQ 282
GT + APE L ++D++S GV+ L++G P + D++
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK 222
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 103/232 (44%), Gaps = 28/232 (12%)
Query: 74 FKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLVH 133
+ D LG GG G V+ + + VA+K++ T Q K L E+ ++ + H N+V
Sbjct: 13 YMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVK 72
Query: 134 L--------------IGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIA 179
+ +G E +V EYM E L + + L+ + R+
Sbjct: 73 VFEILGPSGSQLTDDVGSLTELNSVYIVQEYM-----ETDLANVLEQGPLLEEHARL-FM 126
Query: 180 AGAARGLEYLHNKADPPVIYRDLKAGNILLG-KGFHPKLSDFGLAKFGPT--GDKSHVST 236
RGL+Y+H+ V++RDLK N+ + + K+ DFGLA+ K H+S
Sbjct: 127 YQLLRGLKYIHSAN---VLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSE 183
Query: 237 RVMGTHGYCAPEYATT-GKLTAKSDIFSFGVVLLELITGRPAMDDSQGHERM 287
++ T Y +P + T D+++ G + E++TG+ + E+M
Sbjct: 184 GLV-TKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQM 234
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 92/204 (45%), Gaps = 11/204 (5%)
Query: 74 FKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGE---KEFLVEVLMLSLMRHPN 130
+++ +G G G V A + VA+K+L FQ + K E++++ ++ H N
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRELVLMKVVNHKN 84
Query: 131 LVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLH 190
++ L+ + + L D L +M+ LD + G+++LH
Sbjct: 85 IIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQME-LDHERMSYLLYQMLVGIKHLH 143
Query: 191 NKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYA 250
+ +I+RDLK NI++ K+ DFGLA+ T S + T + T Y APE
Sbjct: 144 SAG---IIHRDLKPSNIVVKSDATLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVI 197
Query: 251 TTGKLTAKSDIFSFGVVLLELITG 274
DI+S GV++ E+I G
Sbjct: 198 LGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 90/205 (43%), Gaps = 14/205 (6%)
Query: 78 NFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGF----QGEKEFLVEVLMLSLMRHPNLVH 133
+ LG+G +G V + +ET AVK L GE E+ +L +RH N++
Sbjct: 11 DLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQ 70
Query: 134 LIG--YCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHN 191
L+ Y E + +V EY G E +L PE K GLEYLH+
Sbjct: 71 LVDVLYNEEKQKMYMVMEYCVCGMQE--MLDSVPE-KRFPVCQAHGYFCQLIDGLEYLHS 127
Query: 192 KADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYAT 251
+ ++++D+K GN+LL G K+S G+A+ G+ + PE A
Sbjct: 128 QG---IVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPEIAN 184
Query: 252 TGKLTA--KSDIFSFGVVLLELITG 274
+ K DI+S GV L + TG
Sbjct: 185 GLDTFSGFKVDIWSAGVTLYNITTG 209
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 92/211 (43%), Gaps = 28/211 (13%)
Query: 80 LGQGGFGAVYKGKLAETGQV-------VAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLV 132
LGQG F ++KG E G V +K LD + F M+S + H +LV
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 133 HLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNK 192
G C G + +LV E++ GSL+ +L + L W ++++A A + +L
Sbjct: 76 LNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINIL-W--KLEVAKQLAWAMHFLEEN 132
Query: 193 ADPPVIYRDLKAGNILL--------GKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGY 244
+I+ ++ A NILL G KLSD G++ K + R+ +
Sbjct: 133 T---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISI--TVLPKDILQERI----PW 183
Query: 245 CAPEYATTGK-LTAKSDIFSFGVVLLELITG 274
PE K L +D +SFG L E+ +G
Sbjct: 184 VPPECIENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 109/256 (42%), Gaps = 49/256 (19%)
Query: 77 TNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEF-LVEVLMLSLMRHPNLVHLI 135
++ LGQG V++G+ +TG + A+K ++ F + + E +L + H N+V L
Sbjct: 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLF 73
Query: 136 GYCAEGTQR--LLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKA 193
E T R +L+ E+ P GSL +L L + + + G+ +L
Sbjct: 74 AIEEETTTRHKVLIMEFCPCGSLYT-VLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG 132
Query: 194 DPPVIYRDLKAGNILL-----GKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPE 248
+++R++K GNI+ G+ + KL+DFG A+ D+ V + GT Y P+
Sbjct: 133 ---IVHRNIKPGNIMRVIGEDGQSVY-KLTDFGAAR-ELEDDEQFVX--LYGTEEYLHPD 185
Query: 249 YATTG--------KLTAKSDIFSFGV-----------------------VLLELITGRP- 276
K A D++S GV V+ ++ITG+P
Sbjct: 186 MYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPS 245
Query: 277 -AMDDSQGHERMLVDW 291
A+ Q E +DW
Sbjct: 246 GAISGVQKAENGPIDW 261
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 90/214 (42%), Gaps = 21/214 (9%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEK------EFLVEVLMLSLMRHPNLVH 133
LG G F V K + TG A K + + + E EV +L + H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 134 LIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKA 193
L T +L+ E + G L D L + + L G+ YLH K
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFL----AQKESLSEEEATSFIKQILDGVNYLHTKK 135
Query: 194 DPPVIYRDLKAGNI-LLGKGF---HPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEY 249
+ + DLK NI LL K H KL DFGLA G + + GT + APE
Sbjct: 136 ---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF---KNIFGTPEFVAPEI 189
Query: 250 ATTGKLTAKSDIFSFGVVLLELITG-RPAMDDSQ 282
L ++D++S GV+ L++G P + D++
Sbjct: 190 VNYEPLGLEADMWSIGVITYILLSGASPFLGDTK 223
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 90/215 (41%), Gaps = 16/215 (7%)
Query: 64 YRQLVAATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLML 123
+R + TD ++ +G G + + T AVK +D + +E +E+L L
Sbjct: 14 HRNSIQFTDGYEVKEDIGVGSYSVCKRCIHKATNXEFAVKIIDKSKRDPTEE--IEIL-L 70
Query: 124 SLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAA 183
+HPN++ L +G +V E G L D +L K +
Sbjct: 71 RYGQHPNIITLKDVYDDGKYVYVVTELXKGGELLDKIL----RQKFFSEREASAVLFTIT 126
Query: 184 RGLEYLHNKADPPVIYRDLKAGNILL----GKGFHPKLSDFGLAKFGPTGDKSHVSTRVM 239
+ +EYLH + V++RDLK NIL G ++ DFG AK + + T
Sbjct: 127 KTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAK-QLRAENGLLXTPCY 182
Query: 240 GTHGYCAPEYATTGKLTAKSDIFSFGVVLLELITG 274
T + APE A DI+S GV+L +TG
Sbjct: 183 -TANFVAPEVLERQGYDAACDIWSLGVLLYTXLTG 216
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 90/214 (42%), Gaps = 21/214 (9%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEK------EFLVEVLMLSLMRHPNLVH 133
LG G F V K + TG A K + + + E EV +L + H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 134 LIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKA 193
L T +L+ E + G L D L + + L G+ YLH K
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFL----AQKESLSEEEATSFIKQILDGVNYLHTK- 134
Query: 194 DPPVIYRDLKAGNI-LLGKGF---HPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEY 249
+ + DLK NI LL K H KL DFGLA G + + GT + APE
Sbjct: 135 --KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF---KNIFGTPEFVAPEI 189
Query: 250 ATTGKLTAKSDIFSFGVVLLELITG-RPAMDDSQ 282
L ++D++S GV+ L++G P + D++
Sbjct: 190 VNYEPLGLEADMWSIGVITYILLSGASPFLGDTK 223
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 103/251 (41%), Gaps = 61/251 (24%)
Query: 79 FLGQGGFG-AVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMR---------H 128
LG G G V++G G+ VAVK++ L++ ++LM H
Sbjct: 22 ILGYGSSGTVVFQGSFQ--GRPVAVKRM-----------LIDFCDIALMEIKLLTESDDH 68
Query: 129 PNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMK-------IAAG 181
PN++ YC+E T R L Y+ L +L L D N +++ +
Sbjct: 69 PNVIRY--YCSETTDRFL---YIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQ 123
Query: 182 AARGLEYLHNKADPPVIYRDLKAGNILL-------------GKGFHPKLSDFGLAKFGPT 228
A G+ +LH+ +I+RDLK NIL+ + +SDFGL K +
Sbjct: 124 IASGVAHLHSLK---IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDS 180
Query: 229 GDKSHVS--TRVMGTHGYCAPE-------YATTGKLTAKSDIFSFGVVLLELIT-GRPAM 278
G S + GT G+ APE T +LT DIFS G V +++ G+
Sbjct: 181 GQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPF 240
Query: 279 DDSQGHERMLV 289
D E ++
Sbjct: 241 GDKYSRESNII 251
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 90/214 (42%), Gaps = 21/214 (9%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEK------EFLVEVLMLSLMRHPNLVH 133
LG G F V K + TG A K + + + E EV +L + H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 134 LIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKA 193
L T +L+ E + G L D L + + L G+ YLH K
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFL----AQKESLSEEEATSFIKQILDGVNYLHTK- 134
Query: 194 DPPVIYRDLKAGNI-LLGKGF---HPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEY 249
+ + DLK NI LL K H KL DFGLA G + + GT + APE
Sbjct: 135 --KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF---KNIFGTPEFVAPEI 189
Query: 250 ATTGKLTAKSDIFSFGVVLLELITG-RPAMDDSQ 282
L ++D++S GV+ L++G P + D++
Sbjct: 190 VNYEPLGLEADMWSIGVITYILLSGASPFLGDTK 223
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 90/214 (42%), Gaps = 21/214 (9%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEK------EFLVEVLMLSLMRHPNLVH 133
LG G F V K + TG A K + + + E EV +L + H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 134 LIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKA 193
L T +L+ E + G L D L + + L G+ YLH K
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFL----AQKESLSEEEATSFIKQILDGVNYLHTK- 134
Query: 194 DPPVIYRDLKAGNI-LLGKGF---HPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEY 249
+ + DLK NI LL K H KL DFGLA G + + GT + APE
Sbjct: 135 --KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF---KNIFGTPEFVAPEI 189
Query: 250 ATTGKLTAKSDIFSFGVVLLELITG-RPAMDDSQ 282
L ++D++S GV+ L++G P + D++
Sbjct: 190 VNYEPLGLEADMWSIGVITYILLSGASPFLGDTK 223
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 95/217 (43%), Gaps = 18/217 (8%)
Query: 71 TDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPN 130
+D ++ +G G FG + ++ ++VAVK ++ G + ++ E++ +RHPN
Sbjct: 17 SDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIE-RGEKIDENVKREIINHRSLRHPN 75
Query: 131 LVHLIGYCAEGTQRLLVYEYMPLGSLEDHLL--GLTPEMKPLDWNTRMKIAAGAARGLEY 188
+V T +V EY G L + + G E + + ++ G+ Y
Sbjct: 76 IVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQL------ISGVSY 129
Query: 189 LHNKADPPVIYRDLKAGNILLGKGFHP--KLSDFGLAKFGPTGDKSHVSTRVMGTHGYCA 246
H V +RDLK N LL P K+ DFG +K + + +GT Y A
Sbjct: 130 CHAMQ---VCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST---VGTPAYIA 183
Query: 247 PEYATTGKLTAK-SDIFSFGVVLLELITGRPAMDDSQ 282
PE + K +D++S GV L ++ G +D +
Sbjct: 184 PEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPE 220
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 90/199 (45%), Gaps = 13/199 (6%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGE---KEFLVEVLMLSLMRHPNLVHLIG 136
+G G G V G VAVK+L FQ + K E+++L + H N++ L+
Sbjct: 32 IGSGAQGIVCAAFDTVLGINVAVKKLS-RPFQNQTHAKRAYRELVLLKCVNHKNIISLLN 90
Query: 137 -YCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKADP 195
+ + T Y+ + ++ +L + LD + G+++LH+
Sbjct: 91 VFTPQKTLEEFQDVYLVMELMDANLCQVI--HMELDHERMSYLLYQMLCGIKHLHSAG-- 146
Query: 196 PVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTGKL 255
+I+RDLK NI++ K+ DFGLA+ T + + T + T Y APE
Sbjct: 147 -IIHRDLKPSNIVVKSDCTLKILDFGLAR---TACTNFMMTPYVVTRYYRAPEVILGMGY 202
Query: 256 TAKSDIFSFGVVLLELITG 274
A DI+S G ++ EL+ G
Sbjct: 203 AANVDIWSVGCIMGELVKG 221
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 90/214 (42%), Gaps = 21/214 (9%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEK------EFLVEVLMLSLMRHPNLVH 133
LG G F V K + TG A K + + + E EV +L + H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 134 LIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKA 193
L T +L+ E + G L D L + + L G+ YLH K
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFL----AQKESLSEEEATSFIKQILDGVNYLHTKK 135
Query: 194 DPPVIYRDLKAGNI-LLGKGF---HPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEY 249
+ + DLK NI LL K H KL DFGLA G + + GT + APE
Sbjct: 136 ---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF---KNIFGTPEFVAPEI 189
Query: 250 ATTGKLTAKSDIFSFGVVLLELITG-RPAMDDSQ 282
L ++D++S GV+ L++G P + D++
Sbjct: 190 VNYEPLGLEADMWSIGVITYILLSGASPFLGDTK 223
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 92/206 (44%), Gaps = 12/206 (5%)
Query: 73 NFKDTNFL---GQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHP 129
+FK NFL + G ++KG+ VV V ++ D + ++F E L + HP
Sbjct: 8 DFKQLNFLTKLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHP 67
Query: 130 NLVHLIGYCAE--GTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLE 187
N++ ++G C L+ + P GSL + L T + +D + +K A ARG
Sbjct: 68 NVLPVLGACQSPPAPHPTLITHWXPYGSLYNVLHEGTNFV--VDQSQAVKFALDXARGXA 125
Query: 188 YLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAP 247
+LH +P + L + ++ + + ++S + + + + V P
Sbjct: 126 FLHT-LEPLIPRHALNSRSVXIDEDXTARISXADVKFSFQSPGRXYAPAWVAPEALQKKP 184
Query: 248 EYATTGKLTAKSDIFSFGVVLLELIT 273
E T + +A D +SF V+L EL+T
Sbjct: 185 E--DTNRRSA--DXWSFAVLLWELVT 206
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 102/247 (41%), Gaps = 57/247 (23%)
Query: 79 FLGQGGFG-AVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMR---------H 128
LG G G V++G G+ VAVK++ L++ ++LM H
Sbjct: 40 ILGYGSSGTVVFQGSFQ--GRPVAVKRM-----------LIDFCDIALMEIKLLTESDDH 86
Query: 129 PNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMK-------IAAG 181
PN++ YC+E T R L Y+ L +L L D N +++ +
Sbjct: 87 PNVIRY--YCSETTDRFL---YIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQ 141
Query: 182 AARGLEYLHNKADPPVIYRDLKAGNILL-------------GKGFHPKLSDFGLAKFGPT 228
A G+ +LH+ +I+RDLK NIL+ + +SDFGL K +
Sbjct: 142 IASGVAHLHSLK---IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDS 198
Query: 229 GDKSHVST--RVMGTHGYCAPEY---ATTGKLTAKSDIFSFGVVLLELIT-GRPAMDDSQ 282
G GT G+ APE +T +LT DIFS G V +++ G+ D
Sbjct: 199 GQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKY 258
Query: 283 GHERMLV 289
E ++
Sbjct: 259 SRESNII 265
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 102/247 (41%), Gaps = 57/247 (23%)
Query: 79 FLGQGGFG-AVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMR---------H 128
LG G G V++G G+ VAVK++ L++ ++LM H
Sbjct: 40 ILGYGSSGTVVFQGSFQ--GRPVAVKRM-----------LIDFCDIALMEIKLLTESDDH 86
Query: 129 PNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMK-------IAAG 181
PN++ YC+E T R L Y+ L +L L D N +++ +
Sbjct: 87 PNVIRY--YCSETTDRFL---YIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQ 141
Query: 182 AARGLEYLHNKADPPVIYRDLKAGNILL-------------GKGFHPKLSDFGLAKFGPT 228
A G+ +LH+ +I+RDLK NIL+ + +SDFGL K +
Sbjct: 142 IASGVAHLHSLK---IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDS 198
Query: 229 GDKSHVST--RVMGTHGYCAPEY---ATTGKLTAKSDIFSFGVVLLELIT-GRPAMDDSQ 282
G GT G+ APE +T +LT DIFS G V +++ G+ D
Sbjct: 199 GQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKY 258
Query: 283 GHERMLV 289
E ++
Sbjct: 259 SRESNII 265
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 95/217 (43%), Gaps = 18/217 (8%)
Query: 71 TDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPN 130
+D ++ +G G FG + + ++VAVK ++ G + ++ E++ +RHPN
Sbjct: 18 SDRYELVKDIGAGNFGVARLMRDKQANELVAVKYIE-RGEKIDENVKREIINHRSLRHPN 76
Query: 131 LVHLIGYCAEGTQRLLVYEYMPLGSLEDHLL--GLTPEMKPLDWNTRMKIAAGAARGLEY 188
+V T +V EY G L + + G E + + ++ G+ Y
Sbjct: 77 IVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQL------ISGVSY 130
Query: 189 LHNKADPPVIYRDLKAGNILLGKGFHP--KLSDFGLAKFGPTGDKSHVSTRVMGTHGYCA 246
H V +RDLK N LL P K++DFG +K + + +GT Y A
Sbjct: 131 AHAMQ---VAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKSA---VGTPAYIA 184
Query: 247 PEYATTGKLTAK-SDIFSFGVVLLELITGRPAMDDSQ 282
PE + K +D++S GV L ++ G +D +
Sbjct: 185 PEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPE 221
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 93/218 (42%), Gaps = 29/218 (13%)
Query: 77 TNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMR-HPNLVHLI 135
+ LG+G + V + G+ AVK ++ EV L + + N++ LI
Sbjct: 18 SELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELI 77
Query: 136 GYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKADP 195
+ + T+ LV+E + GS+ H+ + K + ++ A L++LH K
Sbjct: 78 EFFEDDTRFYLVFEKLQGGSILAHI----QKQKHFNEREASRVVRDVAAALDFLHTKG-- 131
Query: 196 PVIYRDLKAGNILL---GKGFHPKLSDFGLAKFGPTGDKSHVS---------TRVMGTHG 243
+ +RDLK NIL K K+ DF L +G K + S T G+
Sbjct: 132 -IAHRDLKPENILCESPEKVSPVKICDFDLG----SGMKLNNSCTPITTPELTTPCGSAE 186
Query: 244 YCAPEYATTGKLTA-----KSDIFSFGVVLLELITGRP 276
Y APE A + D++S GVVL +++G P
Sbjct: 187 YMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYP 224
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 91/204 (44%), Gaps = 11/204 (5%)
Query: 74 FKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGE---KEFLVEVLMLSLMRHPN 130
+++ +G G G V A + VA+K+L FQ + K E++++ ++ H N
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRELVLMKVVNHKN 84
Query: 131 LVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLH 190
++ L+ + + L D L +M+ LD + G+++LH
Sbjct: 85 IIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQME-LDHERMSYLLYQMLVGIKHLH 143
Query: 191 NKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYA 250
+ +I+RDLK NI++ K+ DFGLA+ T S + T + T Y APE
Sbjct: 144 SAG---IIHRDLKPSNIVVKSDATLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVI 197
Query: 251 TTGKLTAKSDIFSFGVVLLELITG 274
DI+S G ++ E+I G
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 111/263 (42%), Gaps = 32/263 (12%)
Query: 40 PARRNTLDDTLSAHENKNKENTFTYRQLVAATDNFKDTNFLGQGGFGAVYKGKLAETGQV 99
P +L+ +A E KE D F+ GQG FG V GK TG
Sbjct: 2 PGSMMSLNAAAAADERSRKE-----------MDRFQVERMAGQGTFGTVQLGKEKSTGMS 50
Query: 100 VAVKQ-LDDTGFQGEKEFLVEVLMLSLMRHPNLVHLIGYCAEGTQR-------LLVYEYM 151
VA+K+ + D F+ + +++ L+++ HPN+V L Y +R +V EY+
Sbjct: 51 VAIKKVIQDPRFRNRELQIMQD--LAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYV 108
Query: 152 PLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGK 211
P ++ P ++ + R + LH + V +RD+K N+L+ +
Sbjct: 109 PDTLHRCCRNYYRRQVAPPPILIKVFLFQ-LIRSIGCLHLPS-VNVCHRDIKPHNVLVNE 166
Query: 212 GFHP-KLSDFGLA-KFGPTGDKSHVSTRVMGTHGYCAPEYATTGK-LTAKSDIFSFGVVL 268
KL DFG A K P S + + + Y APE + T DI+S G +
Sbjct: 167 ADGTLKLCDFGSAKKLSP----SEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIF 222
Query: 269 LELITGRPAM--DDSQGHERMLV 289
E++ G P D+S G +V
Sbjct: 223 AEMMLGEPIFRGDNSAGQLHEIV 245
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 93/226 (41%), Gaps = 36/226 (15%)
Query: 71 TDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEK---EFLVEVLMLSLMR 127
+D ++ +G G FG + ++ ++VAVK ++ +GEK E++ +R
Sbjct: 18 SDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIE----RGEKIAANVKREIINHRSLR 73
Query: 128 HPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAAR--- 184
HPN+V T +V EY G L + + + + AR
Sbjct: 74 HPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAG------------RFSEDEARFFF 121
Query: 185 -----GLEYLHNKADPPVIYRDLKAGNILLGKGFHP--KLSDFGLAKFGPTGDKSHVSTR 237
G+ Y H V +RDLK N LL P K+ DFG +K + +
Sbjct: 122 QQLISGVSYCHAMQ---VCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST-- 176
Query: 238 VMGTHGYCAPEYATTGKLTAK-SDIFSFGVVLLELITGRPAMDDSQ 282
+GT Y APE + K +D++S GV L ++ G +D +
Sbjct: 177 -VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPE 221
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 97/232 (41%), Gaps = 37/232 (15%)
Query: 69 AATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGF------QGEKEFLVE--V 120
A D + + LG G G V +T + VA+K + F + + VE +
Sbjct: 7 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEI 66
Query: 121 LMLSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAA 180
+L + HP ++ + + + +V E M G L D ++G N R+K A
Sbjct: 67 EILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVG----------NKRLKEAT 115
Query: 181 GAAR------GLEYLHNKADPPVIYRDLKAGNILLGKGFHP---KLSDFGLAKFGPTGDK 231
++YLH +I+RDLK N+LL K++DFG +K G+
Sbjct: 116 CKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGET 170
Query: 232 SHVSTRVMGTHGYCAPEYAT---TGKLTAKSDIFSFGVVLLELITGRPAMDD 280
S + T + GT Y APE T D +S GV+L ++G P +
Sbjct: 171 SLMRT-LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSE 221
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 91/204 (44%), Gaps = 11/204 (5%)
Query: 74 FKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGE---KEFLVEVLMLSLMRHPN 130
+++ +G G G V A + VA+K+L FQ + K E++++ ++ H N
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRELVLMKVVNHKN 84
Query: 131 LVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLH 190
++ L+ + + L D L +M+ LD + G+++LH
Sbjct: 85 IIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQME-LDHERMSYLLYQMLCGIKHLH 143
Query: 191 NKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYA 250
+ +I+RDLK NI++ K+ DFGLA+ T S + T + T Y APE
Sbjct: 144 SAG---IIHRDLKPSNIVVKSDATLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVI 197
Query: 251 TTGKLTAKSDIFSFGVVLLELITG 274
DI+S G ++ E+I G
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 97/232 (41%), Gaps = 37/232 (15%)
Query: 69 AATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGF------QGEKEFLVE--V 120
A D + + LG G G V +T + VA+K + F + + VE +
Sbjct: 7 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEI 66
Query: 121 LMLSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAA 180
+L + HP ++ + + + +V E M G L D ++G N R+K A
Sbjct: 67 EILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVG----------NKRLKEAT 115
Query: 181 GAAR------GLEYLHNKADPPVIYRDLKAGNILLGKGFHP---KLSDFGLAKFGPTGDK 231
++YLH +I+RDLK N+LL K++DFG +K G+
Sbjct: 116 CKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGET 170
Query: 232 SHVSTRVMGTHGYCAPEYAT---TGKLTAKSDIFSFGVVLLELITGRPAMDD 280
S + T + GT Y APE T D +S GV+L ++G P +
Sbjct: 171 SLMRT-LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSE 221
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 91/223 (40%), Gaps = 30/223 (13%)
Query: 71 TDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPN 130
+D + +G G FG + T ++VAVK ++ G ++ E++ +RHPN
Sbjct: 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIE-RGAAIDENVQREIINHRSLRHPN 77
Query: 131 LVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAAR------ 184
+V T ++ EY G L + + + + AR
Sbjct: 78 IVRFKEVILTPTHLAIIMEYASGGELYERICNAG------------RFSEDEARFFFQQL 125
Query: 185 --GLEYLHNKADPPVIYRDLKAGNILLGKGFHP--KLSDFGLAKFGPTGDKSHVSTRVMG 240
G+ Y H+ + +RDLK N LL P K+ DFG +K + + +G
Sbjct: 126 LSGVSYCHSMQ---ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST---VG 179
Query: 241 THGYCAPEYATTGKLTAK-SDIFSFGVVLLELITGRPAMDDSQ 282
T Y APE + K +D++S GV L ++ G +D +
Sbjct: 180 TPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPE 222
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 97/232 (41%), Gaps = 37/232 (15%)
Query: 69 AATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGF------QGEKEFLVE--V 120
A D + + LG G G V +T + VA+K + F + + VE +
Sbjct: 6 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEI 65
Query: 121 LMLSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAA 180
+L + HP ++ + + + +V E M G L D ++G N R+K A
Sbjct: 66 EILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVG----------NKRLKEAT 114
Query: 181 GAAR------GLEYLHNKADPPVIYRDLKAGNILLGKGFHP---KLSDFGLAKFGPTGDK 231
++YLH +I+RDLK N+LL K++DFG +K G+
Sbjct: 115 CKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGET 169
Query: 232 SHVSTRVMGTHGYCAPEYAT---TGKLTAKSDIFSFGVVLLELITGRPAMDD 280
S + T + GT Y APE T D +S GV+L ++G P +
Sbjct: 170 SLMRT-LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSE 220
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 94/216 (43%), Gaps = 27/216 (12%)
Query: 78 NFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMR-HPNLVHLIG 136
+ LG+G V T Q AVK ++ EV ML + H N++ LI
Sbjct: 19 DVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIE 78
Query: 137 YCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPP 196
+ E + LV+E M GS+ H+ + + + + A L++LHNK
Sbjct: 79 FFEEEDRFYLVFEKMRGGSILSHI----HKRRHFNELEASVVVQDVASALDFLHNKG--- 131
Query: 197 VIYRDLKAGNILLGKGFHP------KLSDFGLAK-FGPTGDKSHVSTRVM----GTHGYC 245
+ +RDLK NIL HP K+ DFGL GD S +ST + G+ Y
Sbjct: 132 IAHRDLKPENILCE---HPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYM 188
Query: 246 APEYATTGKLTA-----KSDIFSFGVVLLELITGRP 276
APE A + D++S GV+L L++G P
Sbjct: 189 APEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYP 224
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 97/232 (41%), Gaps = 37/232 (15%)
Query: 69 AATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGF------QGEKEFLVE--V 120
A D + + LG G G V +T + VA+K + F + + VE +
Sbjct: 7 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEI 66
Query: 121 LMLSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAA 180
+L + HP ++ + + + +V E M G L D ++G N R+K A
Sbjct: 67 EILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVG----------NKRLKEAT 115
Query: 181 GAAR------GLEYLHNKADPPVIYRDLKAGNILLGKGFHP---KLSDFGLAKFGPTGDK 231
++YLH +I+RDLK N+LL K++DFG +K G+
Sbjct: 116 CKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGET 170
Query: 232 SHVSTRVMGTHGYCAPEYAT---TGKLTAKSDIFSFGVVLLELITGRPAMDD 280
S + T + GT Y APE T D +S GV+L ++G P +
Sbjct: 171 SLMRT-LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSE 221
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 93/215 (43%), Gaps = 16/215 (7%)
Query: 64 YRQLVAATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLML 123
Y Q + +D + +G G + + T AVK +D + +E +E+L L
Sbjct: 19 YFQSMVFSDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEE--IEIL-L 75
Query: 124 SLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAA 183
+HPN++ L +G LV E M G L D +L K +
Sbjct: 76 RYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKIL----RQKFFSEREASFVLHTIG 131
Query: 184 RGLEYLHNKADPPVIYRDLKAGNIL-LGKGFHP---KLSDFGLAKFGPTGDKSHVSTRVM 239
+ +EYLH++ V++RDLK NIL + + +P ++ DFG AK ++ +
Sbjct: 132 KTVEYLHSQG---VVHRDLKPSNILYVDESGNPECLRICDFGFAK--QLRAENGLLMTPC 186
Query: 240 GTHGYCAPEYATTGKLTAKSDIFSFGVVLLELITG 274
T + APE DI+S G++L ++ G
Sbjct: 187 YTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAG 221
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 97/232 (41%), Gaps = 37/232 (15%)
Query: 69 AATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGF------QGEKEFLVE--V 120
A D + + LG G G V +T + VA+K + F + + VE +
Sbjct: 13 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEI 72
Query: 121 LMLSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAA 180
+L + HP ++ + + + +V E M G L D ++G N R+K A
Sbjct: 73 EILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVG----------NKRLKEAT 121
Query: 181 GAAR------GLEYLHNKADPPVIYRDLKAGNILLGKGFHP---KLSDFGLAKFGPTGDK 231
++YLH +I+RDLK N+LL K++DFG +K G+
Sbjct: 122 CKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGET 176
Query: 232 SHVSTRVMGTHGYCAPEYAT---TGKLTAKSDIFSFGVVLLELITGRPAMDD 280
S + T + GT Y APE T D +S GV+L ++G P +
Sbjct: 177 SLMRT-LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSE 227
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 90/204 (44%), Gaps = 11/204 (5%)
Query: 74 FKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGE---KEFLVEVLMLSLMRHPN 130
+++ +G G G V A + VA+K+L FQ + K E++++ + H N
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRELVLMKCVNHKN 84
Query: 131 LVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLH 190
++ L+ + + L D L +M+ LD + G+++LH
Sbjct: 85 IIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQME-LDHERMSYLLYQMLCGIKHLH 143
Query: 191 NKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYA 250
+ +I+RDLK NI++ K+ DFGLA+ T S + T + T Y APE
Sbjct: 144 SAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVI 197
Query: 251 TTGKLTAKSDIFSFGVVLLELITG 274
DI+S G ++ E+I G
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 97/232 (41%), Gaps = 37/232 (15%)
Query: 69 AATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGF------QGEKEFLVE--V 120
A D + + LG G G V +T + VA++ + F + + VE +
Sbjct: 132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEI 191
Query: 121 LMLSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAA 180
+L + HP ++ + + + +V E M G L D ++G N R+K A
Sbjct: 192 EILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVG----------NKRLKEAT 240
Query: 181 GAAR------GLEYLHNKADPPVIYRDLKAGNILLGKGFHP---KLSDFGLAKFGPTGDK 231
++YLH +I+RDLK N+LL K++DFG +K G+
Sbjct: 241 CKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGET 295
Query: 232 SHVSTRVMGTHGYCAPEYAT---TGKLTAKSDIFSFGVVLLELITGRPAMDD 280
S + T + GT Y APE T D +S GV+L ++G P +
Sbjct: 296 SLMRT-LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSE 346
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 95/231 (41%), Gaps = 41/231 (17%)
Query: 65 RQLVAATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDD---------TGFQGEKE 115
+++ ++F+ +G+G FG V K+ T ++ A+K L+ F+ E++
Sbjct: 67 KEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERD 126
Query: 116 FLVE-------VLMLSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMK 168
LV L + +L ++ Y G L L ED L PE
Sbjct: 127 VLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTL------LSKFEDKL----PEDM 176
Query: 169 PLDWNTRMKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPT 228
+ M +A + L Y+H RD+K N+LL H +L+DFG +
Sbjct: 177 ARFYIGEMVLAIDSIHQLHYVH---------RDIKPDNVLLDVNGHIRLADFG-SCLKMN 226
Query: 229 GDKSHVSTRVMGTHGYCAPEYATT-----GKLTAKSDIFSFGVVLLELITG 274
D + S+ +GT Y +PE GK + D +S GV + E++ G
Sbjct: 227 DDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYG 277
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 90/204 (44%), Gaps = 11/204 (5%)
Query: 74 FKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGE---KEFLVEVLMLSLMRHPN 130
+++ +G G G V A + VA+K+L FQ + K E++++ + H N
Sbjct: 27 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRELVLMKCVNHKN 85
Query: 131 LVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLH 190
++ L+ + + L D L +M+ LD + G+++LH
Sbjct: 86 IIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME-LDHERMSYLLYQMLCGIKHLH 144
Query: 191 NKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYA 250
+ +I+RDLK NI++ K+ DFGLA+ T S + T + T Y APE
Sbjct: 145 SAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVI 198
Query: 251 TTGKLTAKSDIFSFGVVLLELITG 274
DI+S G ++ E+I G
Sbjct: 199 LGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 90/204 (44%), Gaps = 11/204 (5%)
Query: 74 FKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGE---KEFLVEVLMLSLMRHPN 130
+++ +G G G V A + VA+K+L FQ + K E++++ + H N
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRELVLMKCVNHKN 84
Query: 131 LVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLH 190
++ L+ + + L D L +M+ LD + G+++LH
Sbjct: 85 IIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQME-LDHERMSYLLYQMLCGIKHLH 143
Query: 191 NKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYA 250
+ +I+RDLK NI++ K+ DFGLA+ T S + T + T Y APE
Sbjct: 144 SAG---IIHRDLKPSNIVVKSDATLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVI 197
Query: 251 TTGKLTAKSDIFSFGVVLLELITG 274
DI+S G ++ E+I G
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 90/204 (44%), Gaps = 11/204 (5%)
Query: 74 FKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGE---KEFLVEVLMLSLMRHPN 130
+++ +G G G V A + VA+K+L FQ + K E++++ + H N
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRELVLMKCVNHKN 84
Query: 131 LVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLH 190
++ L+ + + L D L +M+ LD + G+++LH
Sbjct: 85 IIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME-LDHERMSYLLYQMLCGIKHLH 143
Query: 191 NKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYA 250
+ +I+RDLK NI++ K+ DFGLA+ T S + T + T Y APE
Sbjct: 144 SAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVI 197
Query: 251 TTGKLTAKSDIFSFGVVLLELITG 274
DI+S G ++ E+I G
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 97/232 (41%), Gaps = 37/232 (15%)
Query: 69 AATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGF------QGEKEFLVE--V 120
A D + + LG G G V +T + VA++ + F + + VE +
Sbjct: 146 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEI 205
Query: 121 LMLSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAA 180
+L + HP ++ + + + +V E M G L D ++G N R+K A
Sbjct: 206 EILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVG----------NKRLKEAT 254
Query: 181 GAAR------GLEYLHNKADPPVIYRDLKAGNILLGKGFHP---KLSDFGLAKFGPTGDK 231
++YLH +I+RDLK N+LL K++DFG +K G+
Sbjct: 255 CKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGET 309
Query: 232 SHVSTRVMGTHGYCAPEYAT---TGKLTAKSDIFSFGVVLLELITGRPAMDD 280
S + T + GT Y APE T D +S GV+L ++G P +
Sbjct: 310 SLMRT-LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSE 360
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 95/203 (46%), Gaps = 13/203 (6%)
Query: 74 FKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGE---KEFLVEVLMLSLMRHPN 130
+++ +G G G V A + VA+K+L FQ + K E++++ + H N
Sbjct: 19 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-RPFQNQTHAKRAYRELVLMKCVNHKN 77
Query: 131 LVHLIG-YCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYL 189
++ L+ + + T Y+ + ++ +L + +M+ LD + G+++L
Sbjct: 78 IISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVI-QME-LDHERMSYLLYQMLXGIKHL 135
Query: 190 HNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEY 249
H+ +I+RDLK NI++ K+ DFGLA+ T S + T + T Y APE
Sbjct: 136 HSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEV 189
Query: 250 ATTGKLTAKSDIFSFGVVLLELI 272
DI+S G ++ E++
Sbjct: 190 ILGMGYKENVDIWSVGCIMGEMV 212
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 95/231 (41%), Gaps = 41/231 (17%)
Query: 65 RQLVAATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDD---------TGFQGEKE 115
+++ ++F+ +G+G FG V K+ T ++ A+K L+ F+ E++
Sbjct: 83 KEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERD 142
Query: 116 FLVE-------VLMLSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMK 168
LV L + +L ++ Y G L L ED L PE
Sbjct: 143 VLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTL------LSKFEDKL----PEDM 192
Query: 169 PLDWNTRMKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPT 228
+ M +A + L Y+H RD+K N+LL H +L+DFG +
Sbjct: 193 ARFYIGEMVLAIDSIHQLHYVH---------RDIKPDNVLLDVNGHIRLADFG-SCLKMN 242
Query: 229 GDKSHVSTRVMGTHGYCAPEYATT-----GKLTAKSDIFSFGVVLLELITG 274
D + S+ +GT Y +PE GK + D +S GV + E++ G
Sbjct: 243 DDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYG 293
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 90/204 (44%), Gaps = 11/204 (5%)
Query: 74 FKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGE---KEFLVEVLMLSLMRHPN 130
+++ +G G G V A + VA+K+L FQ + K E++++ + H N
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRELVLMKCVNHKN 84
Query: 131 LVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLH 190
++ L+ + + L D L +M+ LD + G+++LH
Sbjct: 85 IIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME-LDHERMSYLLYQMLCGIKHLH 143
Query: 191 NKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYA 250
+ +I+RDLK NI++ K+ DFGLA+ T S + T + T Y APE
Sbjct: 144 SAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVI 197
Query: 251 TTGKLTAKSDIFSFGVVLLELITG 274
DI+S G ++ E+I G
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 95/203 (46%), Gaps = 13/203 (6%)
Query: 74 FKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGE---KEFLVEVLMLSLMRHPN 130
+++ +G G G V A + VA+K+L FQ + K E++++ + H N
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-RPFQNQTHAKRAYRELVLMKXVNHKN 84
Query: 131 LVHLIG-YCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYL 189
++ L+ + + T Y+ + ++ +L + +M+ LD + G+++L
Sbjct: 85 IISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVI-QME-LDHERMSYLLYQMLXGIKHL 142
Query: 190 HNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEY 249
H+ +I+RDLK NI++ K+ DFGLA+ T S + T + T Y APE
Sbjct: 143 HSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEV 196
Query: 250 ATTGKLTAKSDIFSFGVVLLELI 272
DI+S G ++ E++
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 89/199 (44%), Gaps = 13/199 (6%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGE---KEFLVEVLMLSLMRHPNLVHLIG 136
+G G G V G VAVK+L FQ + K E+++L + H N++ L+
Sbjct: 30 IGSGAQGIVCAAFDTVLGINVAVKKLS-RPFQNQTHAKRAYRELVLLKCVNHKNIISLLN 88
Query: 137 -YCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKADP 195
+ + T Y+ + ++ +L + LD + G+++LH+
Sbjct: 89 VFTPQKTLEEFQDVYLVMELMDANLCQVI--HMELDHERMSYLLYQMLCGIKHLHSAG-- 144
Query: 196 PVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTGKL 255
+I+RDLK NI++ K+ DFGLA+ T + + T + T Y APE
Sbjct: 145 -IIHRDLKPSNIVVKSDCTLKILDFGLAR---TASTNFMMTPYVVTRYYRAPEVILGMGY 200
Query: 256 TAKSDIFSFGVVLLELITG 274
DI+S G ++ EL+ G
Sbjct: 201 KENVDIWSVGCIMGELVKG 219
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 95/203 (46%), Gaps = 13/203 (6%)
Query: 74 FKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGE---KEFLVEVLMLSLMRHPN 130
+++ +G G G V A + VA+K+L FQ + K E++++ + H N
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-RPFQNQTHAKRAYRELVLMKCVNHKN 84
Query: 131 LVHLIG-YCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYL 189
++ L+ + + T Y+ + ++ +L + +M+ LD + G+++L
Sbjct: 85 IISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVI-QME-LDHERMSYLLYQMLXGIKHL 142
Query: 190 HNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEY 249
H+ +I+RDLK NI++ K+ DFGLA+ T S + T + T Y APE
Sbjct: 143 HSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEV 196
Query: 250 ATTGKLTAKSDIFSFGVVLLELI 272
DI+S G ++ E++
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 90/204 (44%), Gaps = 11/204 (5%)
Query: 74 FKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGE---KEFLVEVLMLSLMRHPN 130
+++ +G G G V A + VA+K+L FQ + K E++++ + H N
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRELVLMKCVNHKN 84
Query: 131 LVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLH 190
++ L+ + + L D L +M+ LD + G+++LH
Sbjct: 85 IIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME-LDHERMSYLLYQMLCGIKHLH 143
Query: 191 NKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYA 250
+ +I+RDLK NI++ K+ DFGLA+ T S + T + T Y APE
Sbjct: 144 SAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPEVVTRYYRAPEVI 197
Query: 251 TTGKLTAKSDIFSFGVVLLELITG 274
DI+S G ++ E+I G
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 95/203 (46%), Gaps = 13/203 (6%)
Query: 74 FKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGE---KEFLVEVLMLSLMRHPN 130
+++ +G G G V A + VA+K+L FQ + K E++++ + H N
Sbjct: 64 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-RPFQNQTHAKRAYRELVLMKCVNHKN 122
Query: 131 LVHLIG-YCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYL 189
++ L+ + + T Y+ + ++ +L + +M+ LD + G+++L
Sbjct: 123 IISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI-QME-LDHERMSYLLYQMLCGIKHL 180
Query: 190 HNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEY 249
H+ +I+RDLK NI++ K+ DFGLA+ T S + T + T Y APE
Sbjct: 181 HSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEV 234
Query: 250 ATTGKLTAKSDIFSFGVVLLELI 272
DI+S G ++ E++
Sbjct: 235 ILGMGYKENVDIWSVGCIMGEMV 257
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 95/203 (46%), Gaps = 13/203 (6%)
Query: 74 FKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGE---KEFLVEVLMLSLMRHPN 130
+++ +G G G V A + VA+K+L FQ + K E++++ + H N
Sbjct: 20 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-RPFQNQTHAKRAYRELVLMKCVNHKN 78
Query: 131 LVHLIG-YCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYL 189
++ L+ + + T Y+ + ++ +L + +M+ LD + G+++L
Sbjct: 79 IISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI-QME-LDHERMSYLLYQMLCGIKHL 136
Query: 190 HNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEY 249
H+ +I+RDLK NI++ K+ DFGLA+ T S + T + T Y APE
Sbjct: 137 HSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEV 190
Query: 250 ATTGKLTAKSDIFSFGVVLLELI 272
DI+S G ++ E++
Sbjct: 191 ILGMGYKENVDIWSVGCIMGEMV 213
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 95/203 (46%), Gaps = 13/203 (6%)
Query: 74 FKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGE---KEFLVEVLMLSLMRHPN 130
+++ +G G G V A + VA+K+L FQ + K E++++ + H N
Sbjct: 25 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-RPFQNQTHAKRAYRELVLMKCVNHKN 83
Query: 131 LVHLIG-YCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYL 189
++ L+ + + T Y+ + ++ +L + +M+ LD + G+++L
Sbjct: 84 IISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI-QME-LDHERMSYLLYQMLCGIKHL 141
Query: 190 HNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEY 249
H+ +I+RDLK NI++ K+ DFGLA+ T S + T + T Y APE
Sbjct: 142 HSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEV 195
Query: 250 ATTGKLTAKSDIFSFGVVLLELI 272
DI+S G ++ E++
Sbjct: 196 ILGMGYKENVDIWSVGCIMGEMV 218
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 102/259 (39%), Gaps = 53/259 (20%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGF-----QGEKEFLVEVLMLSLMRHPNLVHL 134
+GQG +G V +T + A+K ++ + + EV ++ + HPN+ L
Sbjct: 34 IGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARL 93
Query: 135 IGYCAEGTQRLLVYEYMPLGSLEDHL-------------------LGLTPEM-------- 167
+ LV E G L D L + PE
Sbjct: 94 YEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGS 153
Query: 168 -----KPLDWNTRMKIAAGAAR----GLEYLHNKADPPVIYRDLKAGNILLG--KGFHPK 216
+ LD+ R K+ + R L YLHN+ + +RD+K N L K F K
Sbjct: 154 IHGFRESLDFVQREKLISNIMRQIFSALHYLHNQG---ICHRDIKPENFLFSTNKSFEIK 210
Query: 217 LSDFGLAK--FGPTGDKSHVSTRVMGTHGYCAPEYATTGKLT--AKSDIFSFGVVLLELI 272
L DFGL+K + + + T GT + APE T + K D +S GV+L L+
Sbjct: 211 LVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLL 270
Query: 273 TGR---PAMDDSQGHERML 288
G P ++D+ ++L
Sbjct: 271 MGAVPFPGVNDADTISQVL 289
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 95/203 (46%), Gaps = 13/203 (6%)
Query: 74 FKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGE---KEFLVEVLMLSLMRHPN 130
+++ +G G G V A + VA+K+L FQ + K E++++ + H N
Sbjct: 19 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-RPFQNQTHAKRAYRELVLMKCVNHKN 77
Query: 131 LVHLIG-YCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYL 189
++ L+ + + T Y+ + ++ +L + +M+ LD + G+++L
Sbjct: 78 IISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI-QME-LDHERMSYLLYQMLCGIKHL 135
Query: 190 HNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEY 249
H+ +I+RDLK NI++ K+ DFGLA+ T S + T + T Y APE
Sbjct: 136 HSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEV 189
Query: 250 ATTGKLTAKSDIFSFGVVLLELI 272
DI+S G ++ E++
Sbjct: 190 ILGMGYKENVDIWSVGCIMGEMV 212
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 95/203 (46%), Gaps = 13/203 (6%)
Query: 74 FKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGE---KEFLVEVLMLSLMRHPN 130
+++ +G G G V A + VA+K+L FQ + K E++++ + H N
Sbjct: 20 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-RPFQNQTHAKRAYRELVLMKCVNHKN 78
Query: 131 LVHLIG-YCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYL 189
++ L+ + + T Y+ + ++ +L + +M+ LD + G+++L
Sbjct: 79 IISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI-QME-LDHERMSYLLYQMLCGIKHL 136
Query: 190 HNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEY 249
H+ +I+RDLK NI++ K+ DFGLA+ T S + T + T Y APE
Sbjct: 137 HSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEV 190
Query: 250 ATTGKLTAKSDIFSFGVVLLELI 272
DI+S G ++ E++
Sbjct: 191 ILGMGYKENVDIWSVGCIMGEMV 213
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 95/203 (46%), Gaps = 13/203 (6%)
Query: 74 FKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGE---KEFLVEVLMLSLMRHPN 130
+++ +G G G V A + VA+K+L FQ + K E++++ + H N
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-RPFQNQTHAKRAYRELVLMKCVNHKN 84
Query: 131 LVHLIG-YCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYL 189
++ L+ + + T Y+ + ++ +L + +M+ LD + G+++L
Sbjct: 85 IISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI-QME-LDHERMSYLLYQMLCGIKHL 142
Query: 190 HNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEY 249
H+ +I+RDLK NI++ K+ DFGLA+ T S + T + T Y APE
Sbjct: 143 HSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEV 196
Query: 250 ATTGKLTAKSDIFSFGVVLLELI 272
DI+S G ++ E++
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMV 219
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 95/203 (46%), Gaps = 13/203 (6%)
Query: 74 FKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGE---KEFLVEVLMLSLMRHPN 130
+++ +G G G V A + VA+K+L FQ + K E++++ + H N
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-RPFQNQTHAKRAYRELVLMKCVNHKN 84
Query: 131 LVHLIG-YCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYL 189
++ L+ + + T Y+ + ++ +L + +M+ LD + G+++L
Sbjct: 85 IISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI-QME-LDHERMSYLLYQMLCGIKHL 142
Query: 190 HNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEY 249
H+ +I+RDLK NI++ K+ DFGLA+ T S + T + T Y APE
Sbjct: 143 HSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEV 196
Query: 250 ATTGKLTAKSDIFSFGVVLLELI 272
DI+S G ++ E++
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMV 219
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 95/203 (46%), Gaps = 13/203 (6%)
Query: 74 FKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGE---KEFLVEVLMLSLMRHPN 130
+++ +G G G V A + VA+K+L FQ + K E++++ + H N
Sbjct: 64 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-RPFQNQTHAKRAYRELVLMKCVNHKN 122
Query: 131 LVHLIG-YCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYL 189
++ L+ + + T Y+ + ++ +L + +M+ LD + G+++L
Sbjct: 123 IISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI-QME-LDHERMSYLLYQMLCGIKHL 180
Query: 190 HNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEY 249
H+ +I+RDLK NI++ K+ DFGLA+ T S + T + T Y APE
Sbjct: 181 HSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEV 234
Query: 250 ATTGKLTAKSDIFSFGVVLLELI 272
DI+S G ++ E++
Sbjct: 235 ILGMGYKENVDIWSVGCIMGEMV 257
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 95/203 (46%), Gaps = 13/203 (6%)
Query: 74 FKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGE---KEFLVEVLMLSLMRHPN 130
+++ +G G G V A + VA+K+L FQ + K E++++ + H N
Sbjct: 27 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-RPFQNQTHAKRAYRELVLMKCVNHKN 85
Query: 131 LVHLIG-YCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYL 189
++ L+ + + T Y+ + ++ +L + +M+ LD + G+++L
Sbjct: 86 IISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI-QME-LDHERMSYLLYQMLCGIKHL 143
Query: 190 HNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEY 249
H+ +I+RDLK NI++ K+ DFGLA+ T S + T + T Y APE
Sbjct: 144 HSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEV 197
Query: 250 ATTGKLTAKSDIFSFGVVLLELI 272
DI+S G ++ E++
Sbjct: 198 ILGMGYKENVDIWSVGCIMGEMV 220
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 95/203 (46%), Gaps = 13/203 (6%)
Query: 74 FKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGE---KEFLVEVLMLSLMRHPN 130
+++ +G G G V A + VA+K+L FQ + K E++++ + H N
Sbjct: 27 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-RPFQNQTHAKRAYRELVLMKCVNHKN 85
Query: 131 LVHLIG-YCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYL 189
++ L+ + + T Y+ + ++ +L + +M+ LD + G+++L
Sbjct: 86 IISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI-QME-LDHERMSYLLYQMLCGIKHL 143
Query: 190 HNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEY 249
H+ +I+RDLK NI++ K+ DFGLA+ T S + T + T Y APE
Sbjct: 144 HSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEV 197
Query: 250 ATTGKLTAKSDIFSFGVVLLELI 272
DI+S G ++ E++
Sbjct: 198 ILGMGYKENVDIWSVGCIMGEMV 220
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 94/216 (43%), Gaps = 15/216 (6%)
Query: 68 VAATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGE-----KEFLVEVLM 122
V D ++ +G+G F V + ETGQ AVK +D F ++ E +
Sbjct: 20 VLFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASI 79
Query: 123 LSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGA 182
+++HP++V L+ + +V+E+M L ++ + + +A+
Sbjct: 80 CHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIV----KRADAGFVYSEAVASHY 135
Query: 183 ARG-LEYLHNKADPPVIYRDLKAGNILLGKGFHP---KLSDFGLAKFGPTGDKSHVSTRV 238
R LE L D +I+RD+K +LL + KL FG+A G+ V+
Sbjct: 136 MRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAI--QLGESGLVAGGR 193
Query: 239 MGTHGYCAPEYATTGKLTAKSDIFSFGVVLLELITG 274
+GT + APE D++ GV+L L++G
Sbjct: 194 VGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 95/226 (42%), Gaps = 22/226 (9%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFL----VEVLMLSLMR 127
D ++ + +G+G FG V K + VA+K + + +K FL +EV +L LM
Sbjct: 54 DRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKII-----KNKKAFLNQAQIEVRLLELMN 108
Query: 128 HPN------LVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAG 181
+ +VHL + LV+E + S + L + + N K A
Sbjct: 109 KHDTEMKYYIVHLKRHFMFRNHLCLVFEML---SYNLYDLLRNTNFRGVSLNLTRKFAQQ 165
Query: 182 AARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGT 241
L +L + +I+ DLK NILL +PK S + FG + + + +
Sbjct: 166 MCTALLFLAT-PELSIIHCDLKPENILLC---NPKRSAIKIVDFGSSCQLGQRIYQXIQS 221
Query: 242 HGYCAPEYATTGKLTAKSDIFSFGVVLLELITGRPAMDDSQGHERM 287
Y +PE D++S G +L+E+ TG P + ++M
Sbjct: 222 RFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQM 267
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 93/212 (43%), Gaps = 15/212 (7%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGE-----KEFLVEVLMLSLM 126
D ++ +G+G F V + ETGQ AVK +D F ++ E + ++
Sbjct: 26 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML 85
Query: 127 RHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARG- 185
+HP++V L+ + +V+E+M L ++ + + +A+ R
Sbjct: 86 KHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIV----KRADAGFVYSEAVASHYMRQI 141
Query: 186 LEYLHNKADPPVIYRDLKAGNILLGKGFHP---KLSDFGLAKFGPTGDKSHVSTRVMGTH 242
LE L D +I+RD+K +LL + KL FG+A G+ V+ +GT
Sbjct: 142 LEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAI--QLGESGLVAGGRVGTP 199
Query: 243 GYCAPEYATTGKLTAKSDIFSFGVVLLELITG 274
+ APE D++ GV+L L++G
Sbjct: 200 HFMAPEVVKREPYGKPVDVWGCGVILFILLSG 231
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 101/251 (40%), Gaps = 61/251 (24%)
Query: 79 FLGQGGFG-AVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMR---------H 128
LG G G V++G G+ VAVK++ L++ ++LM H
Sbjct: 22 ILGYGSSGTVVFQGSFQ--GRPVAVKRM-----------LIDFCDIALMEIKLLTESDDH 68
Query: 129 PNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMK-------IAAG 181
PN++ YC+E T R L Y+ L +L L D N +++ +
Sbjct: 69 PNVIRY--YCSETTDRFL---YIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQ 123
Query: 182 AARGLEYLHNKADPPVIYRDLKAGNILL-------------GKGFHPKLSDFGLAKFGPT 228
A G+ +LH+ +I+RDLK NIL+ + +SDFGL K +
Sbjct: 124 IASGVAHLHSLK---IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDS 180
Query: 229 GDKSHVS--TRVMGTHGYCAPE-------YATTGKLTAKSDIFSFGVVLLELIT-GRPAM 278
G GT G+ APE T +LT DIFS G V +++ G+
Sbjct: 181 GQXXFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPF 240
Query: 279 DDSQGHERMLV 289
D E ++
Sbjct: 241 GDKYSRESNII 251
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 92/223 (41%), Gaps = 30/223 (13%)
Query: 71 TDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPN 130
+D ++ +G G FG + ++ ++VAVK ++ G + ++ E++ +RHPN
Sbjct: 18 SDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIE-RGEKIDENVKREIINHRSLRHPN 76
Query: 131 LVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAAR------ 184
+V T +V EY G L + + + + AR
Sbjct: 77 IVRFKEVILTPTHLAIVMEYASGGELFERICNAG------------RFSEDEARFFFQQL 124
Query: 185 --GLEYLHNKADPPVIYRDLKAGNILLGKGFHP--KLSDFGLAKFGPTGDKSHVSTRVMG 240
G+ Y H V +RDLK N LL P K+ FG +K + + +G
Sbjct: 125 ISGVSYCHAMQ---VCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKST---VG 178
Query: 241 THGYCAPEYATTGKLTAK-SDIFSFGVVLLELITGRPAMDDSQ 282
T Y APE + K +D++S GV L ++ G +D +
Sbjct: 179 TPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPE 221
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 95/226 (42%), Gaps = 22/226 (9%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFL----VEVLMLSLMR 127
D ++ + +G+G FG V K + VA+K + + +K FL +EV +L LM
Sbjct: 35 DRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKII-----KNKKAFLNQAQIEVRLLELMN 89
Query: 128 HPN------LVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAG 181
+ +VHL + LV+E + S + L + + N K A
Sbjct: 90 KHDTEMKYYIVHLKRHFMFRNHLCLVFEML---SYNLYDLLRNTNFRGVSLNLTRKFAQQ 146
Query: 182 AARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGT 241
L +L + +I+ DLK NILL +PK S + FG + + + +
Sbjct: 147 MCTALLFLAT-PELSIIHCDLKPENILLC---NPKRSAIKIVDFGSSCQLGQRIYQXIQS 202
Query: 242 HGYCAPEYATTGKLTAKSDIFSFGVVLLELITGRPAMDDSQGHERM 287
Y +PE D++S G +L+E+ TG P + ++M
Sbjct: 203 RFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQM 248
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 95/203 (46%), Gaps = 13/203 (6%)
Query: 74 FKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGE---KEFLVEVLMLSLMRHPN 130
+++ +G G G V A + VA+K+L FQ + K E++++ + H N
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-RPFQNQTHAKRAYRELVLMKXVNHKN 84
Query: 131 LVHLIG-YCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYL 189
++ L+ + + T Y+ + ++ +L + +M+ LD + G+++L
Sbjct: 85 IISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI-QME-LDHERMSYLLYQMLCGIKHL 142
Query: 190 HNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEY 249
H+ +I+RDLK NI++ K+ DFGLA+ T S + T + T Y APE
Sbjct: 143 HSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEV 196
Query: 250 ATTGKLTAKSDIFSFGVVLLELI 272
DI+S G ++ E++
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 95/203 (46%), Gaps = 13/203 (6%)
Query: 74 FKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGE---KEFLVEVLMLSLMRHPN 130
+++ +G G G V A + VA+K+L FQ + K E++++ + H N
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-RPFQNQTHAKRAYRELVLMKXVNHKN 84
Query: 131 LVHLIG-YCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYL 189
++ L+ + + T Y+ + ++ +L + +M+ LD + G+++L
Sbjct: 85 IISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVI-QME-LDHERMSYLLYQMLCGIKHL 142
Query: 190 HNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEY 249
H+ +I+RDLK NI++ K+ DFGLA+ T S + T + T Y APE
Sbjct: 143 HSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEV 196
Query: 250 ATTGKLTAKSDIFSFGVVLLELI 272
DI+S G ++ E++
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMV 219
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 89/204 (43%), Gaps = 11/204 (5%)
Query: 74 FKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGE---KEFLVEVLMLSLMRHPN 130
+++ +G G G V A + VA+K+L FQ + K E++++ + H N
Sbjct: 28 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRELVLMKCVNHKN 86
Query: 131 LVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLH 190
++ L+ + + L D L +M+ LD + G+++LH
Sbjct: 87 IIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME-LDHERMSYLLYQMLCGIKHLH 145
Query: 191 NKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYA 250
+ +I+RDLK NI++ K+ DFGLA+ T S + + T Y APE
Sbjct: 146 SAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMVPFVVTRYYRAPEVI 199
Query: 251 TTGKLTAKSDIFSFGVVLLELITG 274
DI+S G ++ E+I G
Sbjct: 200 LGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 91/223 (40%), Gaps = 30/223 (13%)
Query: 71 TDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPN 130
+D ++ +G G FG + ++ ++VAVK ++ G + ++ E++ +RHPN
Sbjct: 18 SDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIE-RGEKIDENVKREIINHRSLRHPN 76
Query: 131 LVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAAR------ 184
+V T +V EY G L + + + + AR
Sbjct: 77 IVRFKEVILTPTHLAIVMEYASGGELFERICNAG------------RFSEDEARFFFQQL 124
Query: 185 --GLEYLHNKADPPVIYRDLKAGNILLGKGFHP--KLSDFGLAKFGPTGDKSHVSTRVMG 240
G+ Y H V +RDLK N LL P K+ FG +K + +G
Sbjct: 125 ISGVSYCHAMQ---VCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQ---PKDTVG 178
Query: 241 THGYCAPEYATTGKLTAK-SDIFSFGVVLLELITGRPAMDDSQ 282
T Y APE + K +D++S GV L ++ G +D +
Sbjct: 179 TPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPE 221
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 90/208 (43%), Gaps = 16/208 (7%)
Query: 71 TDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPN 130
+D + +G G + + T AVK +D + +E +E+L L +HPN
Sbjct: 26 SDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEE--IEIL-LRYGQHPN 82
Query: 131 LVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLH 190
++ L +G LV E M G L D +L K + + +EYLH
Sbjct: 83 IITLKDVYDDGKHVYLVTELMRGGELLDKIL----RQKFFSEREASFVLHTIGKTVEYLH 138
Query: 191 NKADPPVIYRDLKAGNIL-LGKGFHP---KLSDFGLAKFGPTGDKSHVSTRVMGTHGYCA 246
++ V++RDLK NIL + + +P ++ DFG AK ++ + T + A
Sbjct: 139 SQG---VVHRDLKPSNILYVDESGNPECLRICDFGFAK--QLRAENGLLMTPCYTANFVA 193
Query: 247 PEYATTGKLTAKSDIFSFGVVLLELITG 274
PE DI+S G++L ++ G
Sbjct: 194 PEVLKRQGYDEGCDIWSLGILLYTMLAG 221
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 93/216 (43%), Gaps = 27/216 (12%)
Query: 78 NFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMR-HPNLVHLIG 136
+ LG+G V T Q AVK ++ EV ML + H N++ LI
Sbjct: 19 DVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIE 78
Query: 137 YCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPP 196
+ E + LV+E M GS+ H+ + + + + A L++LHNK
Sbjct: 79 FFEEEDRFYLVFEKMRGGSILSHI----HKRRHFNELEASVVVQDVASALDFLHNKG--- 131
Query: 197 VIYRDLKAGNILLGKGFHP------KLSDFGLAK-FGPTGDKSHVSTRVM----GTHGYC 245
+ +RDLK NIL HP K+ DF L GD S +ST + G+ Y
Sbjct: 132 IAHRDLKPENILCE---HPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYM 188
Query: 246 APEYATTGKLTA-----KSDIFSFGVVLLELITGRP 276
APE A + D++S GV+L L++G P
Sbjct: 189 APEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYP 224
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 93/210 (44%), Gaps = 28/210 (13%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLS----LMR 127
+F+ + LG G +G V+K + E G++ AVK+ + F+G K+ ++ + + +
Sbjct: 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKR-SMSPFRGPKDRARKLAEVGSHEKVGQ 115
Query: 128 HPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAA--GAAR- 184
HP V L EG ++Y L+ L G + + W + A G R
Sbjct: 116 HPCCVRLEQAWEEGG---ILY-------LQTELCGPSLQQHCEAWGASLPEAQVWGYLRD 165
Query: 185 ---GLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGT 241
L +LH++ +++ D+K NI LG KL DFGL T V G
Sbjct: 166 TLLALAHLHSQG---LVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQE---GD 219
Query: 242 HGYCAPEYATTGKLTAKSDIFSFGVVLLEL 271
Y APE G +D+FS G+ +LE+
Sbjct: 220 PRYMAPEL-LQGSYGTAADVFSLGLTILEV 248
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 96/233 (41%), Gaps = 40/233 (17%)
Query: 66 QLVAATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGE-----------K 114
+L A + F+ G +GAV G +E G VA+K++ +T G K
Sbjct: 16 ELHAMQSPYTVQRFISSGSYGAVCAGVDSE-GIPVAIKRVFNTVSDGRTVNILSDSFLCK 74
Query: 115 EFLVEVLMLSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDW-- 172
L E+ +L+ HPN++ G + + V+ P H L L E+ D
Sbjct: 75 RVLREIRLLNHFHHPNIL--------GLRDIFVHFEEPAM----HKLYLVTELMRTDLAQ 122
Query: 173 ---NTRMKIAAGAARGLEY-----LHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAK 224
+ R+ I+ + Y LH + V++RDL GNILL + DF LA+
Sbjct: 123 VIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAR 182
Query: 225 FGPT-GDKSHVSTRVMGTHGYCAPEYATTGK-LTAKSDIFSFGVVLLELITGR 275
+K+H T Y APE K T D++S G V+ E+ +
Sbjct: 183 EDTADANKTHYVTH----RWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRK 231
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 96/233 (41%), Gaps = 40/233 (17%)
Query: 66 QLVAATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGE-----------K 114
+L A + F+ G +GAV G +E G VA+K++ +T G K
Sbjct: 16 ELHAMQSPYTVQRFISSGSYGAVCAGVDSE-GIPVAIKRVFNTVSDGRTVNILSDSFLCK 74
Query: 115 EFLVEVLMLSLMRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDW-- 172
L E+ +L+ HPN++ G + + V+ P H L L E+ D
Sbjct: 75 RVLREIRLLNHFHHPNIL--------GLRDIFVHFEEPAM----HKLYLVTELMRTDLAQ 122
Query: 173 ---NTRMKIAAGAARGLEY-----LHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAK 224
+ R+ I+ + Y LH + V++RDL GNILL + DF LA+
Sbjct: 123 VIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAR 182
Query: 225 FGPT-GDKSHVSTRVMGTHGYCAPEYATTGK-LTAKSDIFSFGVVLLELITGR 275
+K+H T Y APE K T D++S G V+ E+ +
Sbjct: 183 EDTADANKTHYVTH----RWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRK 231
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 94/219 (42%), Gaps = 26/219 (11%)
Query: 70 ATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQL----DDTGFQGEKEFLVEVLMLSL 125
+ D ++ LG+G +G VYK T + VA+K++ ++ G G + EV +L
Sbjct: 32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTA--IREVSLLKE 89
Query: 126 MRHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARG 185
++H N++ L + L++EY E+ L + + G
Sbjct: 90 LQHRNIIELKSVIHHNHRLHLIFEYA-----ENDLKKYMDKNPDVSMRVIKSFLYQLING 144
Query: 186 LEYLHNKADPPVIYRDLKAGNILLGKGFHP-----KLSDFGLAK-FG-PTGDKSHVSTRV 238
+ + H++ ++RDLK N+LL K+ DFGLA+ FG P +H
Sbjct: 145 VNFCHSRR---CLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTH----E 197
Query: 239 MGTHGYCAPEYATTGKLTAKS-DIFSFGVVLLELITGRP 276
+ T Y PE + + S DI+S + E++ P
Sbjct: 198 IITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTP 236
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 94/226 (41%), Gaps = 22/226 (9%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFL----VEVLMLSLMR 127
D ++ + +G+G FG V K + VA+K + + +K FL +EV +L LM
Sbjct: 54 DRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKII-----KNKKAFLNQAQIEVRLLELMN 108
Query: 128 HPN------LVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAG 181
+ +VHL + LV+E + S + L + + N K A
Sbjct: 109 KHDTEMKYYIVHLKRHFMFRNHLCLVFEML---SYNLYDLLRNTNFRGVSLNLTRKFAQQ 165
Query: 182 AARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGT 241
L +L + +I+ DLK NILL +PK + FG + + + +
Sbjct: 166 MCTALLFLAT-PELSIIHCDLKPENILLC---NPKRXAIKIVDFGSSCQLGQRIYQXIQS 221
Query: 242 HGYCAPEYATTGKLTAKSDIFSFGVVLLELITGRPAMDDSQGHERM 287
Y +PE D++S G +L+E+ TG P + ++M
Sbjct: 222 RFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQM 267
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 58/113 (51%), Gaps = 17/113 (15%)
Query: 168 KPLDWNTRMKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAK--- 224
+P+ + + ARG+E+L ++ I+RDL A NILL + K+ DFGLA+
Sbjct: 194 EPITMEDLISYSFQVARGMEFLSSRK---CIHRDLAARNILLSENNVVKICDFGLARDIY 250
Query: 225 ----FGPTGDKSHVSTRVMGTHGYCAPEYATTGKLTAKSDIFSFGVVLLELIT 273
+ GD TR+ + APE + KSD++S+GV+L E+ +
Sbjct: 251 KNPDYVRKGD-----TRL--PLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFS 296
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 90/205 (43%), Gaps = 11/205 (5%)
Query: 74 FKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGE---KEFLVEVLMLSLMRHPN 130
+++ +G G G V A + VA+K+L FQ + K E++++ + H N
Sbjct: 31 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRELVLMKCVNHKN 89
Query: 131 LVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLH 190
++ L+ + + L D L +M+ LD + G+++LH
Sbjct: 90 IIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME-LDHERMSYLLYQMLCGIKHLH 148
Query: 191 NKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYA 250
+ +I+RDLK NI++ K+ DFGLA+ T S + T + T Y APE
Sbjct: 149 SAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVI 202
Query: 251 TTGKLTAKSDIFSFGVVLLELITGR 275
D++S G ++ E++ +
Sbjct: 203 LGMGYKENVDLWSVGCIMGEMVCHK 227
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 90/205 (43%), Gaps = 11/205 (5%)
Query: 74 FKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGE---KEFLVEVLMLSLMRHPN 130
+++ +G G G V A + VA+K+L FQ + K E++++ + H N
Sbjct: 20 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRELVLMKCVNHKN 78
Query: 131 LVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLH 190
++ L+ + + L D L +M+ LD + G+++LH
Sbjct: 79 IIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME-LDHERMSYLLYQMLCGIKHLH 137
Query: 191 NKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYA 250
+ +I+RDLK NI++ K+ DFGLA+ T S + T + T Y APE
Sbjct: 138 SAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVI 191
Query: 251 TTGKLTAKSDIFSFGVVLLELITGR 275
D++S G ++ E++ +
Sbjct: 192 LGMGYKENVDLWSVGCIMGEMVCHK 216
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 90/203 (44%), Gaps = 20/203 (9%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVK------QLDDTGFQGEK--EFLVEVLMLSLMRHPNL 131
LG G FG V+ E + V VK L+D + K + +E+ +LS + H N+
Sbjct: 32 LGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANI 91
Query: 132 VHLIG-YCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLH 190
+ ++ + +G +L++ ++ GS D L LD I + YL
Sbjct: 92 IKVLDIFENQGFFQLVMEKH---GSGLD-LFAFIDRHPRLDEPLASYIFRQLVSAVGYLR 147
Query: 191 NKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYA 250
K +I+RD+K NI++ + F KL DFG A + G + GT YCAPE
Sbjct: 148 LK---DIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYT---FCGTIEYCAPEVL 201
Query: 251 TTGKLTA-KSDIFSFGVVLLELI 272
+ +++S GV L L+
Sbjct: 202 MGNPYRGPELEMWSLGVTLYTLV 224
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 102/249 (40%), Gaps = 36/249 (14%)
Query: 45 TLDDTLSAHENKNKENTFTYRQLVAATDNFKDTNFLGQGGFGAV--------------YK 90
++ D LS + N N + ++ ++++ L QG F + Y+
Sbjct: 5 SMKDILSNYSNLIYLNKYV-KEKDKYINDYRIIRTLNQGKFNKIILCEKDNKFYALKKYE 63
Query: 91 GKLAETGQVVAVKQLDDTGFQGE-KEFLVEVLMLSLMRHPNLVHLIGYCAEGTQRLLVYE 149
L E + D + + +F E+ +++ +++ + G + ++YE
Sbjct: 64 KSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYE 123
Query: 150 YMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAAR--------GLEYLHNKADPPVIYRD 201
YM D +L LD N I + Y+HN+ + + +RD
Sbjct: 124 YME----NDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKN--ICHRD 177
Query: 202 LKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTGKLT--AKS 259
+K NIL+ K KLSDFG +++ DK +R GT+ + PE+ + AK
Sbjct: 178 VKPSNILMDKNGRVKLSDFGESEY--MVDKKIKGSR--GTYEFMPPEFFSNESSYNGAKV 233
Query: 260 DIFSFGVVL 268
DI+S G+ L
Sbjct: 234 DIWSLGICL 242
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 96/212 (45%), Gaps = 18/212 (8%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNL 131
+ F+ +G G FG +Y G +T + VA+K L++ + + + L +
Sbjct: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIK-LENVKTKHPQLLYESKIYRILQGGTGI 65
Query: 132 VHLIGYCAEGTQRLLVYEYMPLG-SLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLH 190
++ + EG +LV + LG SLED L + L T + +A +E++H
Sbjct: 66 PNVRWFGVEGDYNVLVMDL--LGPSLED-LFNFC--SRKLSLKTVLMLADQMINRVEFVH 120
Query: 191 NKADPPVIYRDLKAGNILLGKGFHPK---LSDFGLA-KFGPTGDKSHVSTR----VMGTH 242
+K+ ++RD+K N L+G G + DFGLA K+ T H+ R + GT
Sbjct: 121 SKS---FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTA 177
Query: 243 GYCAPEYATTGKLTAKSDIFSFGVVLLELITG 274
Y + + + + D+ S G VL+ + G
Sbjct: 178 RYASVNTHLGIEQSRRDDLESLGYVLMYFLRG 209
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 91/211 (43%), Gaps = 19/211 (9%)
Query: 80 LGQGGFGAVYKGKLAETGQV--VAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLVHL--- 134
+G+G +G VYK K + A+KQ++ TG E+ +L ++HPN++ L
Sbjct: 29 VGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSA--CREIALLRELKHPNVISLQKV 86
Query: 135 -IGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRM--KIAAGAARGLEYLHN 191
+ + L Y L + KP+ M + G+ YLH
Sbjct: 87 FLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHA 146
Query: 192 KADPPVIYRDLKAGNIL-LGKGFHP---KLSDFGLAKFGPTGDKSHVSTR-VMGTHGYCA 246
V++RDLK NIL +G+G K++D G A+ + K V+ T Y A
Sbjct: 147 NW---VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRA 203
Query: 247 PEYATTGKLTAKS-DIFSFGVVLLELITGRP 276
PE + K+ DI++ G + EL+T P
Sbjct: 204 PELLLGARHYTKAIDIWAIGCIFAELLTSEP 234
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 89/212 (41%), Gaps = 32/212 (15%)
Query: 78 NFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGE--KEFLVEVLMLSLMRHPNLVHLI 135
+G+G FG VY G+ G+V A++ +D + K F EV+ RH N+V +
Sbjct: 39 ELIGKGRFGQVYHGRWH--GEV-AIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFM 95
Query: 136 GYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMK-PLDWNTRMKIAAGAARGLEYLHNKAD 194
G C L + + G L + + K LD N +IA +G+ YLH K
Sbjct: 96 GACM-SPPHLAIITSLCKGRT---LYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKG- 150
Query: 195 PPVIYRDLKAGNILLGKGFHPKLSDFGLAKF------GPTGDKSHVSTRVMGTHGYCAPE 248
++++DLK+ N+ G ++DFGL G DK + G + APE
Sbjct: 151 --ILHKDLKSKNVFYDNG-KVVITDFGLFSISGVLQAGRREDKLRIQN---GWLCHLAPE 204
Query: 249 YATTGK---------LTAKSDIFSFGVVLLEL 271
+ SD+F+ G + EL
Sbjct: 205 IIRQLSPDTEEDKLPFSKHSDVFALGTIWYEL 236
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 47/107 (43%), Gaps = 13/107 (12%)
Query: 176 MKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVS 235
+ I A +E+LH+K +++RDLK NI K+ DFGL ++
Sbjct: 167 LHIFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 223
Query: 236 TRVM----------GTHGYCAPEYATTGKLTAKSDIFSFGVVLLELI 272
M GT Y +PE + K DIFS G++L EL+
Sbjct: 224 LTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
Score = 29.6 bits (65), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Query: 73 NFKDTNFLGQGGFGAVY--KGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPN 130
+F+ +G+GGFG V+ K K+ + + +L + EK + EV L+ + HP
Sbjct: 7 DFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREK-VMREVKALAKLEHPG 65
Query: 131 LV 132
+V
Sbjct: 66 IV 67
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 89/205 (43%), Gaps = 11/205 (5%)
Query: 74 FKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGE---KEFLVEVLMLSLMRHPN 130
+++ +G G G V A + VA+K+L FQ + K E++++ + H N
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRELVLMKCVNHKN 84
Query: 131 LVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLH 190
++ L+ + + L D L +M+ LD + G+++LH
Sbjct: 85 IIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME-LDHERMSYLLYQMLCGIKHLH 143
Query: 191 NKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYA 250
+ +I+RDLK NI++ K+ DFGLA+ T S + + T Y APE
Sbjct: 144 SAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMEPEVVTRYYRAPEVI 197
Query: 251 TTGKLTAKSDIFSFGVVLLELITGR 275
DI+S G ++ E++ +
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMVCHK 222
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 96/223 (43%), Gaps = 24/223 (10%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLVHLIGYC- 138
+G G FG +Y G +G+ VA+K + + +E +M+ + I +C
Sbjct: 17 IGSGSFGDIYLGANIASGEEVAIKL--ECVKTKHPQLHIESKFYKMMQGGVGIPSIKWCG 74
Query: 139 AEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVI 198
AEG ++V E + SLED L + T + +A +EY+H+K I
Sbjct: 75 AEGDYNVMVMELLG-PSLED-LFNFCS--RKFSLKTVLLLADQMISRIEYIHSKN---FI 127
Query: 199 YRDLKAGNILLG---KGFHPKLSDFGLA-KFGPTGDKSHVSTR----VMGTHGYCAPEYA 250
+RD+K N L+G KG + DFGLA K+ H+ R + GT Y +
Sbjct: 128 HRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTH 187
Query: 251 TTGKLTAKSDIFSFGVVLLEL------ITGRPAMDDSQGHERM 287
+ + + D+ S G VL+ G A Q +ER+
Sbjct: 188 LGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERI 230
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 96/223 (43%), Gaps = 24/223 (10%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLVHLIGYC- 138
+G G FG +Y G G+ VA+K + + +E + +M+ + I +C
Sbjct: 15 IGSGSFGDIYLGTDIAAGEEVAIKL--ECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCG 72
Query: 139 AEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVI 198
AEG ++V E + SLED L + T + +A +EY+H+K I
Sbjct: 73 AEGDYNVMVMELLG-PSLED-LFNFCS--RKFSLKTVLLLADQMISRIEYIHSKN---FI 125
Query: 199 YRDLKAGNILLG---KGFHPKLSDFGLA-KFGPTGDKSHVSTR----VMGTHGYCAPEYA 250
+RD+K N L+G KG + DFGLA K+ H+ R + GT Y +
Sbjct: 126 HRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTH 185
Query: 251 TTGKLTAKSDIFSFGVVLLEL------ITGRPAMDDSQGHERM 287
+ + + D+ S G VL+ G A Q +ER+
Sbjct: 186 LGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERI 228
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 96/223 (43%), Gaps = 24/223 (10%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLVHLIGYC- 138
+G G FG +Y G G+ VA+K + + +E + +M+ + I +C
Sbjct: 17 IGSGSFGDIYLGTDIAAGEEVAIKL--ECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCG 74
Query: 139 AEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVI 198
AEG ++V E + SLED L + T + +A +EY+H+K I
Sbjct: 75 AEGDYNVMVMELLG-PSLED-LFNFCS--RKFSLKTVLLLADQMISRIEYIHSKN---FI 127
Query: 199 YRDLKAGNILLG---KGFHPKLSDFGLA-KFGPTGDKSHVSTR----VMGTHGYCAPEYA 250
+RD+K N L+G KG + DFGLA K+ H+ R + GT Y +
Sbjct: 128 HRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTH 187
Query: 251 TTGKLTAKSDIFSFGVVLLEL------ITGRPAMDDSQGHERM 287
+ + + D+ S G VL+ G A Q +ER+
Sbjct: 188 LGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERI 230
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 105/230 (45%), Gaps = 47/230 (20%)
Query: 67 LVAATDNFKDTNFLGQGGFGA-VYKGKLAETGQVVAVKQLDDTGFQ-GEKEFLVEVLMLS 124
++ +F + LG G G VY+G + VAVK++ F ++E V++L S
Sbjct: 19 VIVGKISFCPKDVLGHGAEGTIVYRGMF--DNRDVAVKRILPECFSFADRE--VQLLRES 74
Query: 125 LMRHPNLVHLIGYCAEGTQRLLVYEYMPL----GSLEDHL-------LGLTPEMKPLDWN 173
HPN++ +C E ++ ++Y+ + +L++++ LGL P
Sbjct: 75 -DEHPNVIRY--FCTEKDRQ---FQYIAIELCAATLQEYVEQKDFAHLGLEP-------- 120
Query: 174 TRMKIAAGAARGLEYLHNKADPPVIYRDLKAGNILLG-KGFHPK----LSDFGLAKFGPT 228
+ + GL +LH+ +++RDLK NIL+ H K +SDFGL K
Sbjct: 121 --ITLLQQTTSGLAHLHSLN---IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAV 175
Query: 229 GDKSHVSTR--VMGTHGYCAPEYATTG---KLTAKSDIFSFGVVLLELIT 273
G S S R V GT G+ APE + T DIFS G V +I+
Sbjct: 176 GRHS-FSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVIS 224
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 50/93 (53%), Gaps = 5/93 (5%)
Query: 182 AARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVST-RVMG 240
A+G+E+L ++ I+RDL A NILL + K+ DFGLA+ D +V
Sbjct: 207 VAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLAR-DIYKDPDYVRKGDARL 262
Query: 241 THGYCAPEYATTGKLTAKSDIFSFGVVLLELIT 273
+ APE T +SD++SFGV+L E+ +
Sbjct: 263 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 295
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 89/205 (43%), Gaps = 11/205 (5%)
Query: 74 FKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGE---KEFLVEVLMLSLMRHPN 130
+++ +G G G V A + VA+K+L FQ + K E++++ + H N
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRELVLMKCVNHKN 84
Query: 131 LVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLH 190
++ L+ + + L D L +M+ LD + G+++LH
Sbjct: 85 IIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME-LDHERMSYLLYQMLCGIKHLH 143
Query: 191 NKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYA 250
+ +I+RDLK NI++ K+ DFGLA+ T S + + T Y APE
Sbjct: 144 SAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMEPEVVTRYYRAPEVI 197
Query: 251 TTGKLTAKSDIFSFGVVLLELITGR 275
D++S G ++ E++ +
Sbjct: 198 LGMGYKENVDLWSVGCIMGEMVCHK 222
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 50/93 (53%), Gaps = 5/93 (5%)
Query: 182 AARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVST-RVMG 240
A+G+E+L ++ I+RDL A NILL + K+ DFGLA+ D +V
Sbjct: 209 VAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLAR-DIYKDPDYVRKGDARL 264
Query: 241 THGYCAPEYATTGKLTAKSDIFSFGVVLLELIT 273
+ APE T +SD++SFGV+L E+ +
Sbjct: 265 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 297
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 50/93 (53%), Gaps = 5/93 (5%)
Query: 182 AARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVST-RVMG 240
A+G+E+L ++ I+RDL A NILL + K+ DFGLA+ D +V
Sbjct: 202 VAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLAR-DIYKDPDYVRKGDARL 257
Query: 241 THGYCAPEYATTGKLTAKSDIFSFGVVLLELIT 273
+ APE T +SD++SFGV+L E+ +
Sbjct: 258 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 290
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 50/93 (53%), Gaps = 5/93 (5%)
Query: 182 AARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVST-RVMG 240
A+G+E+L ++ I+RDL A NILL + K+ DFGLA+ D +V
Sbjct: 200 VAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLAR-DIYKDPDYVRKGDARL 255
Query: 241 THGYCAPEYATTGKLTAKSDIFSFGVVLLELIT 273
+ APE T +SD++SFGV+L E+ +
Sbjct: 256 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 288
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 87/215 (40%), Gaps = 16/215 (7%)
Query: 78 NFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLVHLIGY 137
N +G+G +G V T A K++ + F E+ ++ + HPN++ L
Sbjct: 15 NTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYET 74
Query: 138 CAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPV 197
+ T LV E G L + ++ + + +I + Y H V
Sbjct: 75 FEDNTDIYLVMELCTGGELFERVV----HKRVFRESDAARIMKDVLSAVAYCHKLN---V 127
Query: 198 IYRDLKAGNILL---GKGFHPKLSDFGL-AKFGPTGDKSHVSTRVMGTHGYCAPEYATTG 253
+RDLK N L KL DFGL A+F P + T+V GT Y +P+ G
Sbjct: 128 AHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPG---KMMRTKV-GTPYYVSPQ-VLEG 182
Query: 254 KLTAKSDIFSFGVVLLELITGRPAMDDSQGHERML 288
+ D +S GV++ L+ G P E ML
Sbjct: 183 LYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVML 217
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 95/232 (40%), Gaps = 32/232 (13%)
Query: 68 VAATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDT--GFQGEKEFLVEVLMLSL 125
V DN+ + +G+G +G VY T + VA+K+++ K L E+ +L+
Sbjct: 22 VHVPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNR 81
Query: 126 MRHPNLVHLIGYCAEGTQRLLVYE--YMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAA 183
++ ++ L Y LL ++ Y+ L + L L L I
Sbjct: 82 LKSDYIIRL--YDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIKTILYNLL 139
Query: 184 RGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKF------------------ 225
G ++H +I+RDLK N LL + K+ DFGLA+
Sbjct: 140 LGENFIHESG---IIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEE 196
Query: 226 -GPTGD--KSHVSTRVMGTHGYCAPEYATTGKLTAKS-DIFSFGVVLLELIT 273
GP K +++ V+ T Y APE + KS DI+S G + EL+
Sbjct: 197 PGPHNKNLKKQLTSHVV-TRWYRAPELILLQENYTKSIDIWSTGCIFAELLN 247
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 85/208 (40%), Gaps = 24/208 (11%)
Query: 79 FLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEF------LVEVLMLSLMRH--PN 130
LG GGFG+VY G VA+K ++ E +EV++L +
Sbjct: 15 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 74
Query: 131 LVHLIGYCAEGTQRLLVYEYM-PLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYL 189
++ L+ + +L+ E M P+ L D E L + +
Sbjct: 75 VIRLLDWFERPDSFVLILERMEPVQDLFD----FITERGALQEELARSFFWQVLEAVRHC 130
Query: 190 HNKADPPVIYRDLKAGNIL--LGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAP 247
HN V++RD+K NIL L +G KL DFG K V T GT Y P
Sbjct: 131 HNCG---VLHRDIKDENILIDLNRG-ELKLIDFGSGALL----KDTVYTDFDGTRVYSPP 182
Query: 248 EYATTGKLTAKS-DIFSFGVVLLELITG 274
E+ + +S ++S G++L +++ G
Sbjct: 183 EWIRYHRYHGRSAAVWSLGILLYDMVCG 210
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 87/215 (40%), Gaps = 16/215 (7%)
Query: 78 NFLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHPNLVHLIGY 137
N +G+G +G V T A K++ + F E+ ++ + HPN++ L
Sbjct: 32 NTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYET 91
Query: 138 CAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPV 197
+ T LV E G L + ++ + + +I + Y H V
Sbjct: 92 FEDNTDIYLVMELCTGGELFERVV----HKRVFRESDAARIMKDVLSAVAYCHKLN---V 144
Query: 198 IYRDLKAGNILL---GKGFHPKLSDFGL-AKFGPTGDKSHVSTRVMGTHGYCAPEYATTG 253
+RDLK N L KL DFGL A+F P + T+V GT Y +P+ G
Sbjct: 145 AHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPG---KMMRTKV-GTPYYVSPQ-VLEG 199
Query: 254 KLTAKSDIFSFGVVLLELITGRPAMDDSQGHERML 288
+ D +S GV++ L+ G P E ML
Sbjct: 200 LYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVML 234
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 95/216 (43%), Gaps = 26/216 (12%)
Query: 73 NFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDT---GFQGEKEFLVEVLMLSLMR-- 127
++ LG+GGFG V+ G VA+K + G+ + + L ++L+
Sbjct: 32 EYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKV 91
Query: 128 -----HPNLVHLIGYCAEGTQRLLVYEY-MPLGSLEDHLLGLTPEMKPLDWNTRMKIAAG 181
HP ++ L+ + +LV E +P L D++ E PL
Sbjct: 92 GAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYIT----EKGPLGEGPSRCFFGQ 147
Query: 182 AARGLEYLHNKADPPVIYRDLKAGNIL--LGKGFHPKLSDFGLAKFGPTGDKSHVSTRVM 239
+++ H++ V++RD+K NIL L +G KL DFG D+ + T
Sbjct: 148 VVAAIQHCHSRG---VVHRDIKDENILIDLRRGCA-KLIDFGSGAL--LHDEPY--TDFD 199
Query: 240 GTHGYCAPEYATTGKLTA-KSDIFSFGVVLLELITG 274
GT Y PE+ + + A + ++S G++L +++ G
Sbjct: 200 GTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCG 235
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
Query: 199 YRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYATTGKLTAK 258
+RD+K NIL+ L DFG+A T +K +GT Y APE + T +
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIAS-ATTDEKLTQLGNTVGTLYYXAPERFSESHATYR 215
Query: 259 SDIFSFGVVLLELITGRPAMDDSQ 282
+DI++ VL E +TG P Q
Sbjct: 216 ADIYALTCVLYECLTGSPPYQGDQ 239
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 92/234 (39%), Gaps = 33/234 (14%)
Query: 68 VAATDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDDT--GFQGEKEFLVEVLMLSL 125
V DN++ + +G+G +G VY + VA+K+++ K L E+ +L+
Sbjct: 24 VKVPDNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNR 83
Query: 126 MRHPNLVHLIGYCAEGTQRLLVYE--YMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAA 183
++ ++ L + LL ++ Y+ L + L L L I
Sbjct: 84 LKSDYIIRLHDLII--PEDLLKFDELYIVLEIADSDLKKLFKTPIFLTEQHVKTILYNLL 141
Query: 184 RGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVS-------- 235
G +++H +I+RDLK N LL + K+ DFGLA+ + H+
Sbjct: 142 LGEKFIHESG---IIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEE 198
Query: 236 ---------------TRVMGTHGYCAPEYATTGK-LTAKSDIFSFGVVLLELIT 273
T + T Y APE + T DI+S G + EL+
Sbjct: 199 NEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLN 252
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 88/207 (42%), Gaps = 20/207 (9%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHP------NLVH 133
+G+G FG V K + Q VA+K + + + ++ E+ +L +R N++H
Sbjct: 105 IGKGSFGQVVKAYDHKVHQHVALKMVRNEK-RFHRQAAEEIRILEHLRKQDKDNTMNVIH 163
Query: 134 LIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKA 193
++ + +E + + E L + + K A + L+ LH
Sbjct: 164 MLENFTFRNHICMTFELLSMNLYE---LIKKNKFQGFSLPLVRKFAHSILQCLDALHKNR 220
Query: 194 DPPVIYRDLKAGNILLGKGFHP--KLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYAT 251
+I+ DLK NILL + K+ DFG + + + + +R Y APE
Sbjct: 221 ---IIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTXIQSRF-----YRAPEVIL 272
Query: 252 TGKLTAKSDIFSFGVVLLELITGRPAM 278
+ D++S G +L EL+TG P +
Sbjct: 273 GARYGMPIDMWSLGCILAELLTGYPLL 299
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 88/207 (42%), Gaps = 20/207 (9%)
Query: 80 LGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEFLVEVLMLSLMRHP------NLVH 133
+G+G FG V K + Q VA+K + + + ++ E+ +L +R N++H
Sbjct: 105 IGKGSFGQVVKAYDHKVHQHVALKMVRNEK-RFHRQAAEEIRILEHLRKQDKDNTMNVIH 163
Query: 134 LIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKA 193
++ + +E + + E L + + K A + L+ LH
Sbjct: 164 MLENFTFRNHICMTFELLSMNLYE---LIKKNKFQGFSLPLVRKFAHSILQCLDALHKNR 220
Query: 194 DPPVIYRDLKAGNILLGKGFHP--KLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAPEYAT 251
+I+ DLK NILL + K+ DFG + + + + +R Y APE
Sbjct: 221 ---IIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTXIQSRF-----YRAPEVIL 272
Query: 252 TGKLTAKSDIFSFGVVLLELITGRPAM 278
+ D++S G +L EL+TG P +
Sbjct: 273 GARYGMPIDMWSLGCILAELLTGYPLL 299
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 96/227 (42%), Gaps = 30/227 (13%)
Query: 72 DNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLD--DTGFQGEKEFLVE---VLMLSLM 126
D+F+ +G+G F V K+ +TGQV A+K ++ D +GE E VL+
Sbjct: 61 DDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDR 120
Query: 127 RHPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLD----WNTRMKIAAGA 182
R +H + LV EY G L LL E P + + + +A +
Sbjct: 121 RWITQLHFA--FQDENYLYLVMEYYVGGDLLT-LLSKFGERIPAEMARFYLAEIVMAIDS 177
Query: 183 ARGLEYLHNKADPPVIYRDLKAGNILLGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTH 242
L Y+H RD+K NILL + H +L+DFG + D + S +GT
Sbjct: 178 VHRLGYVH---------RDIKPDNILLDRCGHIRLADFG-SCLKLRADGTVRSLVAVGTP 227
Query: 243 GYCAPEY-------ATTGKLTAKSDIFSFGVVLLELITGR-PAMDDS 281
Y +PE TG + D ++ GV E+ G+ P DS
Sbjct: 228 DYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADS 274
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 87/205 (42%), Gaps = 20/205 (9%)
Query: 96 TGQVVAVKQLDDTGFQGEK-EFLVEVLMLS-LMRHPNLVHLIGYCAEGTQRLLVYEYMPL 153
TG+ V V++++ E FL L +S L HPN+V + +V +M
Sbjct: 35 TGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAY 94
Query: 154 GSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIYRDLKAGNILL---G 210
GS +D L T M ++ I G + L+Y+H+ ++R +KA +IL+ G
Sbjct: 95 GSAKD--LICTHFMDGMNELAIAYILQGVLKALDYIHHMG---YVHRSVKASHILISVDG 149
Query: 211 KGFHPKL-SDFGLAKFGPTGDKSH----VSTRVMGTHGYCAPEYATTG--KLTAKSDIFS 263
K + L S+ + G H S +V+ + +PE AKSDI+S
Sbjct: 150 KVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLP---WLSPEVLQQNLQGYDAKSDIYS 206
Query: 264 FGVVLLELITGRPAMDDSQGHERML 288
G+ EL G D + +L
Sbjct: 207 VGITACELANGHVPFKDMPATQMLL 231
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 84/208 (40%), Gaps = 24/208 (11%)
Query: 79 FLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEF------LVEVLMLSLMRH--PN 130
LG GGFG+VY G VA+K ++ E +EV++L +
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 131 LVHLIGYCAEGTQRLLVYEY-MPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYL 189
++ L+ + +L+ E P+ L D E L + +
Sbjct: 71 VIRLLDWFERPDSFVLILERPEPVQDLFD----FITERGALQEELARSFFWQVLEAVRHC 126
Query: 190 HNKADPPVIYRDLKAGNIL--LGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAP 247
HN V++RD+K NIL L +G KL DFG K V T GT Y P
Sbjct: 127 HNXG---VLHRDIKDENILIDLNRG-ELKLIDFGSGALL----KDTVYTDFDGTRVYSPP 178
Query: 248 EYATTGKLTAKS-DIFSFGVVLLELITG 274
E+ + +S ++S G++L +++ G
Sbjct: 179 EWIRYHRYHGRSAAVWSLGILLYDMVCG 206
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 87/205 (42%), Gaps = 20/205 (9%)
Query: 96 TGQVVAVKQLDDTGFQGEK-EFLVEVLMLS-LMRHPNLVHLIGYCAEGTQRLLVYEYMPL 153
TG+ V V++++ E FL L +S L HPN+V + +V +M
Sbjct: 51 TGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAY 110
Query: 154 GSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYLHNKADPPVIYRDLKAGNILL---G 210
GS +D L T M ++ I G + L+Y+H+ ++R +KA +IL+ G
Sbjct: 111 GSAKD--LICTHFMDGMNELAIAYILQGVLKALDYIHHMG---YVHRSVKASHILISVDG 165
Query: 211 KGFHPKL-SDFGLAKFGPTGDKSH----VSTRVMGTHGYCAPEYATTG--KLTAKSDIFS 263
K + L S+ + G H S +V+ + +PE AKSDI+S
Sbjct: 166 KVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLP---WLSPEVLQQNLQGYDAKSDIYS 222
Query: 264 FGVVLLELITGRPAMDDSQGHERML 288
G+ EL G D + +L
Sbjct: 223 VGITACELANGHVPFKDMPATQMLL 247
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 85/208 (40%), Gaps = 24/208 (11%)
Query: 79 FLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEF------LVEVLMLSLMRH--PN 130
LG GGFG+VY G VA+K ++ E +EV++L +
Sbjct: 15 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 74
Query: 131 LVHLIGYCAEGTQRLLVYEY-MPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYL 189
++ L+ + +L+ E P+ L D + E L + +
Sbjct: 75 VIRLLDWFERPDSFVLILERPEPVQDLFDFIT----ERGALQEELARSFFWQVLEAVRHC 130
Query: 190 HNKADPPVIYRDLKAGNIL--LGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAP 247
HN V++RD+K NIL L +G KL DFG K V T GT Y P
Sbjct: 131 HNCG---VLHRDIKDENILIDLNRG-ELKLIDFGSGALL----KDTVYTDFDGTRVYSPP 182
Query: 248 EYATTGKLTAKS-DIFSFGVVLLELITG 274
E+ + +S ++S G++L +++ G
Sbjct: 183 EWIRYHRYHGRSAAVWSLGILLYDMVCG 210
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 85/208 (40%), Gaps = 24/208 (11%)
Query: 79 FLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEF------LVEVLMLSLMRH--PN 130
LG GGFG+VY G VA+K ++ E +EV++L +
Sbjct: 30 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 89
Query: 131 LVHLIGYCAEGTQRLLVYEY-MPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYL 189
++ L+ + +L+ E P+ L D + E L + +
Sbjct: 90 VIRLLDWFERPDSFVLILERPEPVQDLFDFIT----ERGALQEELARSFFWQVLEAVRHC 145
Query: 190 HNKADPPVIYRDLKAGNIL--LGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAP 247
HN V++RD+K NIL L +G KL DFG K V T GT Y P
Sbjct: 146 HNCG---VLHRDIKDENILIDLNRG-ELKLIDFGSGALL----KDTVYTDFDGTRVYSPP 197
Query: 248 EYATTGKLTAKS-DIFSFGVVLLELITG 274
E+ + +S ++S G++L +++ G
Sbjct: 198 EWIRYHRYHGRSAAVWSLGILLYDMVCG 225
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 85/208 (40%), Gaps = 24/208 (11%)
Query: 79 FLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEF------LVEVLMLSLMRH--PN 130
LG GGFG+VY G VA+K ++ E +EV++L +
Sbjct: 30 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 89
Query: 131 LVHLIGYCAEGTQRLLVYEY-MPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYL 189
++ L+ + +L+ E P+ L D + E L + +
Sbjct: 90 VIRLLDWFERPDSFVLILERPEPVQDLFDFIT----ERGALQEELARSFFWQVLEAVRHC 145
Query: 190 HNKADPPVIYRDLKAGNIL--LGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAP 247
HN V++RD+K NIL L +G KL DFG K V T GT Y P
Sbjct: 146 HNCG---VLHRDIKDENILIDLNRG-ELKLIDFGSGALL----KDTVYTDFDGTRVYSPP 197
Query: 248 EYATTGKLTAKS-DIFSFGVVLLELITG 274
E+ + +S ++S G++L +++ G
Sbjct: 198 EWIRYHRYHGRSAAVWSLGILLYDMVCG 225
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 85/208 (40%), Gaps = 24/208 (11%)
Query: 79 FLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEF------LVEVLMLSLMRH--PN 130
LG GGFG+VY G VA+K ++ E +EV++L +
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 90
Query: 131 LVHLIGYCAEGTQRLLVYEY-MPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYL 189
++ L+ + +L+ E P+ L D + E L + +
Sbjct: 91 VIRLLDWFERPDSFVLILERPEPVQDLFDFIT----ERGALQEELARSFFWQVLEAVRHC 146
Query: 190 HNKADPPVIYRDLKAGNIL--LGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAP 247
HN V++RD+K NIL L +G KL DFG K V T GT Y P
Sbjct: 147 HNCG---VLHRDIKDENILIDLNRG-ELKLIDFGSGALL----KDTVYTDFDGTRVYSPP 198
Query: 248 EYATTGKLTAKS-DIFSFGVVLLELITG 274
E+ + +S ++S G++L +++ G
Sbjct: 199 EWIRYHRYHGRSAAVWSLGILLYDMVCG 226
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 64/148 (43%), Gaps = 6/148 (4%)
Query: 71 TDNFKDTNFLGQGGFGAVYKGKLAETGQVVAVKQLDD--TGFQGEKEFLVEVLMLSLM-R 127
T F + +G G FG+V+K G + A+K+ G E+ L EV +++ +
Sbjct: 8 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 67
Query: 128 HPNLVHLIGYCAEGTQRLLVYEYMPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLE 187
H ++V AE L+ EY GSL D + M + RGL
Sbjct: 68 HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLR 127
Query: 188 YLHNKADPPVIYRDLKAGNILLGKGFHP 215
Y+H+ + +++ D+K NI + + P
Sbjct: 128 YIHSMS---LVHMDIKPSNIFISRTSIP 152
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 85/208 (40%), Gaps = 24/208 (11%)
Query: 79 FLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEF------LVEVLMLSLMRH--PN 130
LG GGFG+VY G VA+K ++ E +EV++L +
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 75
Query: 131 LVHLIGYCAEGTQRLLVYEY-MPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYL 189
++ L+ + +L+ E P+ L D + E L + +
Sbjct: 76 VIRLLDWFERPDSFVLILERPEPVQDLFDFIT----ERGALQEELARSFFWQVLEAVRHC 131
Query: 190 HNKADPPVIYRDLKAGNIL--LGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAP 247
HN V++RD+K NIL L +G KL DFG K V T GT Y P
Sbjct: 132 HNCG---VLHRDIKDENILIDLNRG-ELKLIDFGSGALL----KDTVYTDFDGTRVYSPP 183
Query: 248 EYATTGKLTAKS-DIFSFGVVLLELITG 274
E+ + +S ++S G++L +++ G
Sbjct: 184 EWIRYHRYHGRSAAVWSLGILLYDMVCG 211
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 85/208 (40%), Gaps = 24/208 (11%)
Query: 79 FLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEF------LVEVLMLSLMRH--PN 130
LG GGFG+VY G VA+K ++ E +EV++L +
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 90
Query: 131 LVHLIGYCAEGTQRLLVYEY-MPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYL 189
++ L+ + +L+ E P+ L D + E L + +
Sbjct: 91 VIRLLDWFERPDSFVLILERPEPVQDLFDFIT----ERGALQEELARSFFWQVLEAVRHC 146
Query: 190 HNKADPPVIYRDLKAGNIL--LGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAP 247
HN V++RD+K NIL L +G KL DFG K V T GT Y P
Sbjct: 147 HNCG---VLHRDIKDENILIDLNRG-ELKLIDFGSGALL----KDTVYTDFDGTRVYSPP 198
Query: 248 EYATTGKLTAKS-DIFSFGVVLLELITG 274
E+ + +S ++S G++L +++ G
Sbjct: 199 EWIRYHRYHGRSAAVWSLGILLYDMVCG 226
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 85/208 (40%), Gaps = 24/208 (11%)
Query: 79 FLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEF------LVEVLMLSLMRH--PN 130
LG GGFG+VY G VA+K ++ E +EV++L +
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 90
Query: 131 LVHLIGYCAEGTQRLLVYEY-MPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYL 189
++ L+ + +L+ E P+ L D + E L + +
Sbjct: 91 VIRLLDWFERPDSFVLILERPEPVQDLFDFIT----ERGALQEELARSFFWQVLEAVRHC 146
Query: 190 HNKADPPVIYRDLKAGNIL--LGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAP 247
HN V++RD+K NIL L +G KL DFG K V T GT Y P
Sbjct: 147 HNCG---VLHRDIKDENILIDLNRG-ELKLIDFGSGALL----KDTVYTDFDGTRVYSPP 198
Query: 248 EYATTGKLTAKS-DIFSFGVVLLELITG 274
E+ + +S ++S G++L +++ G
Sbjct: 199 EWIRYHRYHGRSAAVWSLGILLYDMVCG 226
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 84/208 (40%), Gaps = 24/208 (11%)
Query: 79 FLGQGGFGAVYKGKLAETGQVVAVKQLDDTGFQGEKEF------LVEVLMLSLMRH--PN 130
LG GGFG+VY G VA+K ++ E +EV++L +
Sbjct: 14 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 73
Query: 131 LVHLIGYCAEGTQRLLVYEY-MPLGSLEDHLLGLTPEMKPLDWNTRMKIAAGAARGLEYL 189
++ L+ + +L+ E P+ L D E L + +
Sbjct: 74 VIRLLDWFERPDSFVLILERPEPVQDLFD----FITERGALQEELARSFFWQVLEAVRHC 129
Query: 190 HNKADPPVIYRDLKAGNIL--LGKGFHPKLSDFGLAKFGPTGDKSHVSTRVMGTHGYCAP 247
HN V++RD+K NIL L +G KL DFG K V T GT Y P
Sbjct: 130 HNCG---VLHRDIKDENILIDLNRG-ELKLIDFGSGALL----KDTVYTDFDGTRVYSPP 181
Query: 248 EYATTGKLTAKS-DIFSFGVVLLELITG 274
E+ + +S ++S G++L +++ G
Sbjct: 182 EWIRYHRYHGRSAAVWSLGILLYDMVCG 209
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.137 0.419
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,755,041
Number of Sequences: 62578
Number of extensions: 424654
Number of successful extensions: 3719
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 933
Number of HSP's successfully gapped in prelim test: 136
Number of HSP's that attempted gapping in prelim test: 847
Number of HSP's gapped (non-prelim): 1116
length of query: 299
length of database: 14,973,337
effective HSP length: 98
effective length of query: 201
effective length of database: 8,840,693
effective search space: 1776979293
effective search space used: 1776979293
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 51 (24.3 bits)