BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022313
(299 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1YQD|A Chain A, Sinapyl Alcohol Dehydrogenase Complexed With Nadp+
pdb|1YQD|B Chain B, Sinapyl Alcohol Dehydrogenase Complexed With Nadp+
pdb|1YQX|A Chain A, Sinapyl Alcohol Dehydrogenase At 2.5 Angstrom Resolution
pdb|1YQX|B Chain B, Sinapyl Alcohol Dehydrogenase At 2.5 Angstrom Resolution
Length = 366
Score = 255 bits (652), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 141/275 (51%), Positives = 180/275 (65%)
Query: 11 LGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHE 70
GWAARD SG LSP++F+RRA G +DV + +CGVC++D+ +N G S YPLVPGHE
Sbjct: 18 FGWAARDQSGHLSPFNFSRRATGEEDVRFKVLYCGVCHSDLHSIKNDWGFSMYPLVPGHE 77
Query: 71 IVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTI 130
IVG V EVG V + VGD VGVG V +C CE C + LE +C + + T+ +I DGTI
Sbjct: 78 IVGEVTEVGSKVKKVNVGDKVGVGCLVGACHSCESCANDLENYCPKMILTYASIYHDGTI 137
Query: 131 TKGGYSSYIVVHERYCYKIANDYXXXXXXXXXXXGITVYTPMMRHKMNQPGKSLGVIGLG 190
T GGYS+++V +ERY + ++ GITVY+P+ +++PGK +G++GLG
Sbjct: 138 TYGGYSNHMVANERYIIRFPDNMPLDGGAPLLCAGITVYSPLKYFGLDEPGKHIGIVGLG 197
Query: 191 GLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIID 250
GLGH+AVKF KAFG VTV+STS SKKEEAL GAD F+VS D EQM+A +LD IID
Sbjct: 198 GLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGADSFLVSRDQEQMQAAAGTLDGIID 257
Query: 251 TASGDHPFDAYMSLLKVAGVYVLVGFPSKVKFSPA 285
T S HP LLK G +LVG P K PA
Sbjct: 258 TVSAVHPLLPLFGLLKSHGKLILVGAPEKPLELPA 292
>pdb|2CF5|A Chain A, Crystal Structures Of The Arabidopsis Cinnamyl Alcohol
Dehydrogenases, Atcad5
pdb|2CF6|A Chain A, Crystal Structures Of The Arabidopsis Cinnamyl Alcohol
Dehydrogenases Atcad5
Length = 357
Score = 198 bits (504), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 123/270 (45%), Positives = 172/270 (63%)
Query: 6 ASKDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPL 65
A + GWAARDPSG+LSPY++ R G +DV+I I CG+C+ D+ T+N G S YP+
Sbjct: 6 AERKTTGWAARDPSGILSPYTYTLRETGPEDVNIRIICCGICHTDLHQTKNDLGMSNYPM 65
Query: 66 VPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAID 125
VPGHE+VG V EVG +VS+F VGD VGVG V C C C LE +C + ++++N +
Sbjct: 66 VPGHEVVGEVVEVGSDVSKFTVGDIVGVGCLVGCCGGCSPCERDLEQYCPKKIWSYNDVY 125
Query: 126 ADGTITKGGYSSYIVVHERYCYKIANDYXXXXXXXXXXXGITVYTPMMRHKMNQPGKSLG 185
+G T+GG++ VVH+++ KI G+TVY+P+ + QPG G
Sbjct: 126 INGQPTQGGFAKATVVHQKFVVKIPEGMAVEQAAPLLCAGVTVYSPLSHFGLKQPGLRGG 185
Query: 186 VIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSL 245
++GLGG+GHM VK KA G +VTV+S+S K+EEAL LGAD +V+ SD +M L SL
Sbjct: 186 ILGLGGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADDYVIGSDQAKMSELADSL 245
Query: 246 DFIIDTASGDHPFDAYMSLLKVAGVYVLVG 275
D++IDT H + Y+SLLK+ G +L+G
Sbjct: 246 DYVIDTVPVHHALEPYLSLLKLDGKLILMG 275
>pdb|1UUF|A Chain A, Crystal Structure Of A Zinc-Type Alcohol
Dehydrogenase-Like Protein Yahk
Length = 369
Score = 189 bits (480), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 119/280 (42%), Positives = 161/280 (57%), Gaps = 7/280 (2%)
Query: 12 GWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEI 71
++A+ P L P RR G +DV I I +CGVC++D+ R++ + YP VPGHEI
Sbjct: 28 AYSAKQP---LEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGTVYPCVPGHEI 84
Query: 72 VGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGT-I 130
VG V VG V ++ GD VGVG V+SC+ CE C DGLE +C T+N+ D
Sbjct: 85 VGRVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGH 144
Query: 131 TKGGYSSYIVVHERYCYKIANDYXXXXXXXXXX-XGITVYTPMMRHKMNQPGKSLGVIGL 189
T GGYS IVVHERY +I + GIT Y+P +RH PGK +GV+G+
Sbjct: 145 TLGGYSQQIVVHERYVLRIRHPQEQLAAVAPLLCAGITTYSP-LRHWQAGPGKKVGVVGI 203
Query: 190 GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFII 249
GGLGHM +K A G +V +TS +K+E A + LGAD+ V S + ++M A KS DFI+
Sbjct: 204 GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKA-LGADEVVNSRNADEMAAHLKSFDFIL 262
Query: 250 DTASGDHPFDAYMSLLKVAGVYVLVGFPSKVKFSPASLNI 289
+T + H D + +LLK G LVG P+ SP N+
Sbjct: 263 NTVAAPHNLDDFTTLLKRDGTMTLVGAPATPHKSPEVFNL 302
>pdb|3TWO|A Chain A, The Crystal Structure Of Cad From Helicobacter Pylori
Complexed With Nadp(H)
pdb|3TWO|B Chain B, The Crystal Structure Of Cad From Helicobacter Pylori
Complexed With Nadp(H)
Length = 348
Score = 179 bits (454), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 106/275 (38%), Positives = 154/275 (56%), Gaps = 10/275 (3%)
Query: 12 GWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEI 71
G+A P+ F+R AVG DV I I + G+C++D+ ++ + YP++PGHEI
Sbjct: 7 GFAIFSKDEHFKPHDFSRHAVGPRDVLIDILYAGICHSDIHSAYSEWKEGIYPMIPGHEI 66
Query: 72 VGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDA--DGT 129
GI+KEVG V +FK+GD VGVG +VNSC+ C+ C + E C + V+T++ +D+ D
Sbjct: 67 AGIIKEVGKGVKKFKIGDVVGVGCFVNSCKACKPCKEHQEQFCTKVVFTYDCLDSFHDNE 126
Query: 130 ITKGGYSSYIVVHERYCYKIANDYXXXXXXXXXXXGITVYTPMMRHKMNQPGKSLGVIGL 189
GGYS+ IVV E Y + + GIT Y+P+ K+ + G +GV G
Sbjct: 127 PHMGGYSNNIVVDENYVISVDKNAPLEKVAPLLCAGITTYSPLKFSKVTK-GTKVGVAGF 185
Query: 190 GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFII 249
GGLG MAVK+ A G V+V + + KK++ALS +G F +D +Q K + LDFII
Sbjct: 186 GGLGSMAVKYAVAMGAEVSVFARNEHKKQDALS-MGVKHFY--TDPKQCK---EELDFII 239
Query: 250 DTASGDHPFDAYMSLLKVAGVYVLVGFPSKVKFSP 284
T + Y+ LL G LVG P V+ +P
Sbjct: 240 STIPTHYDLKDYLKLLTYNGDLALVGLPP-VEVAP 273
>pdb|1PS0|A Chain A, Crystal Structure Of The Nadp(H)-Dependent Cinnamyl
Alcohol Dehydrogenase From Saccharomyces Cerevisiae
pdb|1Q1N|A Chain A, Apo And Holo Structures Of An Nadp(h)-dependent Cinnamyl
Alcohol Dehydrogenase From Saccharomyces Cerevisiae
pdb|1PIW|A Chain A, Apo And Holo Structures Of An Nadp(H)-Dependent Cinnamyl
Alcohol Dehydrogenase From Saccharomyces Cerevisiae
pdb|1PIW|B Chain B, Apo And Holo Structures Of An Nadp(H)-Dependent Cinnamyl
Alcohol Dehydrogenase From Saccharomyces Cerevisiae
Length = 360
Score = 124 bits (311), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 87/248 (35%), Positives = 136/248 (54%), Gaps = 6/248 (2%)
Query: 36 DVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVG-HNVSRFKVGDHVGVG 94
D+ I I CGVC +D+ G+ K PLV GHEIVG V ++G + S KVG VGVG
Sbjct: 35 DIDIKIEACGVCGSDIHCAAGHWGNMKMPLVVGHEIVGKVVKLGPKSNSGLKVGQRVGVG 94
Query: 95 TYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYX 154
V SC +C+ C + E +C + V T++ DG +++GGY++Y+ VHE + I +
Sbjct: 95 AQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYVSQGGYANYVRVHEHFVVPIPENIP 154
Query: 155 XXXXXXXXXXGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTST 214
G+TVY+P++R+ PGK +G++GLGG+G M KA G V+S S+
Sbjct: 155 SHLAAPLLCGGLTVYSPLVRNGCG-PGKKVGIVGLGGIGSMGTLISKAMGAETYVISRSS 213
Query: 215 SKKEEALSLLGADKFVVS-SDLEQMKALGKSLDFIIDTASG--DHPFDAYMSLLKVAGVY 271
K+E+A+ +GAD ++ + + + + + D I+ AS D F+ +KV G
Sbjct: 214 RKREDAMK-MGADHYIATLEEGDWGEKYFDTFDLIVVCASSLTDIDFNIMPKAMKVGGRI 272
Query: 272 VLVGFPSK 279
V + P +
Sbjct: 273 VSISIPEQ 280
>pdb|1RJW|A Chain A, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
pdb|1RJW|B Chain B, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
pdb|1RJW|C Chain C, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
pdb|1RJW|D Chain D, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
Length = 339
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 83/251 (33%), Positives = 122/251 (48%), Gaps = 19/251 (7%)
Query: 36 DVSITITHCGVCYADVIWTRNKHGD----SKYPLVPGHEIVGIVKEVGHNVSRFKVGDHV 91
+V + I CGVC+ D+ HGD K PL+PGHE VGIV+EVG V+ KVGD V
Sbjct: 27 EVLVRIKACGVCHTDL---HAAHGDWPVKPKLPLIPGHEGVGIVEEVGPGVTHLKVGDRV 83
Query: 92 GVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIAN 151
G+ ++C C+YC G E C ++D GGY+ Y Y KI +
Sbjct: 84 GIPWLYSACGHCDYCLSGQETLCEHQKNAGYSVD-------GGYAEYCRAAADYVVKIPD 136
Query: 152 DYXXXXXXXXXXXGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLS 211
+ G+T Y ++ +PG+ + + G+GGLGH+AV++ KA GLNV +
Sbjct: 137 NLSFEEAAPIFCAGVTTYK-ALKVTGAKPGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVD 195
Query: 212 TSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFI---IDTASGDHPFDAYMSLLKVA 268
K E A LGAD V + K + + + + + TA F + + ++
Sbjct: 196 IGDEKLELAKE-LGADLVVNPLKEDAAKFMKEKVGGVHAAVVTAVSKPAFQSAYNSIRRG 254
Query: 269 GVYVLVGFPSK 279
G VLVG P +
Sbjct: 255 GACVLVGLPPE 265
>pdb|3PII|A Chain A, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase
With Substrate Analogue Butyramide
pdb|3PII|C Chain C, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase
With Substrate Analogue Butyramide
pdb|3PII|B Chain B, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase
With Substrate Analogue Butyramide
pdb|3PII|D Chain D, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase
With Substrate Analogue Butyramide
Length = 339
Score = 120 bits (301), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 82/251 (32%), Positives = 121/251 (48%), Gaps = 19/251 (7%)
Query: 36 DVSITITHCGVCYADVIWTRNKHGD----SKYPLVPGHEIVGIVKEVGHNVSRFKVGDHV 91
+V + I CGVC+ D+ HGD K PL+PGHE VGIV+EVG V+ KVGD V
Sbjct: 27 EVLVRIKACGVCHTDL---HAAHGDWPVKPKLPLIPGHEGVGIVEEVGPGVTHLKVGDRV 83
Query: 92 GVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIAN 151
G+ ++C C+YC G E C ++D GGY+ Y Y KI +
Sbjct: 84 GIPWLYSACGHCDYCLSGQETLCEHQKNAGYSVD-------GGYAEYCRAAADYVVKIPD 136
Query: 152 DYXXXXXXXXXXXGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLS 211
+ G+T Y ++ +PG+ + + G+GG GH+AV++ KA GLNV +
Sbjct: 137 NLSFEEAAPIFCAGVTTYK-ALKVTGAKPGEWVAIYGIGGFGHVAVQYAKAMGLNVVAVD 195
Query: 212 TSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFI---IDTASGDHPFDAYMSLLKVA 268
K E A LGAD V + K + + + + + TA F + + ++
Sbjct: 196 IGDEKLELAKE-LGADLVVNPLKEDAAKFMKEKVGGVHAAVVTAVSKPAFQSAYNSIRRG 254
Query: 269 GVYVLVGFPSK 279
G VLVG P +
Sbjct: 255 GACVLVGLPPE 265
>pdb|1LLU|A Chain A, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|B Chain B, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|C Chain C, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|D Chain D, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|E Chain E, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|F Chain F, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|G Chain G, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|H Chain H, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
Length = 342
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 115/252 (45%), Gaps = 19/252 (7%)
Query: 33 GSDDVSITITHCGVCYADVIWTRNKHGD----SKYPLVPGHEIVGIVKEVGHNVSRFKVG 88
G V + I GVC+ D+ GD P +PGHE VG V VG V+R K G
Sbjct: 30 GPGQVLVKIEASGVCHTDL---HAAEGDWPVKPPLPFIPGHEGVGYVAAVGSGVTRVKEG 86
Query: 89 DHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYK 148
D VG+ +C CE+C G E C T G GGY+ Y++ Y
Sbjct: 87 DRVGIPWLYTACGCCEHCLTGWETLCESQQNT-------GYSVNGGYAEYVLADPNYVGI 139
Query: 149 IANDYXXXXXXXXXXXGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVT 208
+ + G+TVY ++ +PG+ + + G+GGLGH+AV++ +A GL+V
Sbjct: 140 LPKNVEFAEIAPILCAGVTVYK-GLKQTNARPGQWVAISGIGGLGHVAVQYARAMGLHVA 198
Query: 209 VLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLD---FIIDTASGDHPFDAYMSLL 265
+ +K E A LGA V + + ++A+ + + ++ TA + F + +
Sbjct: 199 AIDIDDAKLELARK-LGASLTVNARQEDPVEAIQRDIGGAHGVLVTAVSNSAFGQAIGMA 257
Query: 266 KVAGVYVLVGFP 277
+ G LVG P
Sbjct: 258 RRGGTIALVGLP 269
>pdb|3S1L|A Chain A, Crystal Structure Of Apo-Form Furx
pdb|3S1L|B Chain B, Crystal Structure Of Apo-Form Furx
pdb|3S1L|C Chain C, Crystal Structure Of Apo-Form Furx
pdb|3S1L|D Chain D, Crystal Structure Of Apo-Form Furx
pdb|3S2E|A Chain A, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|B Chain B, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|C Chain C, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|D Chain D, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|E Chain E, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|F Chain F, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|G Chain G, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|H Chain H, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2F|A Chain A, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|B Chain B, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|C Chain C, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|D Chain D, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|E Chain E, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|F Chain F, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|G Chain G, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|H Chain H, Crystal Structure Of Furx Nadh:furfural
pdb|3S2G|A Chain A, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|B Chain B, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|C Chain C, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|D Chain D, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|E Chain E, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|F Chain F, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|G Chain G, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|H Chain H, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2I|A Chain A, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|B Chain B, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|C Chain C, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|D Chain D, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|E Chain E, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|F Chain F, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|G Chain G, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|H Chain H, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
Length = 340
Score = 104 bits (259), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 112/252 (44%), Gaps = 19/252 (7%)
Query: 33 GSDDVSITITHCGVCYADVIWTRNKHGD----SKYPLVPGHEIVGIVKEVGHNVSRFKVG 88
G V + I GVC+ D+ GD P +PGHE VG V VG VSR K G
Sbjct: 26 GPGQVQVKIEASGVCHTDL---HAADGDWPVKPTLPFIPGHEGVGYVSAVGSGVSRVKEG 82
Query: 89 DHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYK 148
D VGV ++C CE+C G E C + T G GGY Y+V Y
Sbjct: 83 DRVGVPWLYSACGYCEHCLQGWETLCEKQQNT-------GYSVNGGYGEYVVADPNYVGL 135
Query: 149 IANDYXXXXXXXXXXXGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVT 208
+ + G+TVY ++ +PG+ + + G+GGLGH+AV++ +A GL V
Sbjct: 136 LPDKVGFVEIAPILCAGVTVYK-GLKVTDTRPGQWVVISGIGGLGHVAVQYARAMGLRVA 194
Query: 209 VLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLD---FIIDTASGDHPFDAYMSLL 265
+ +K A LGA+ V + D + L K + ++ TA F + ++
Sbjct: 195 AVDIDDAKLNLA-RRLGAEVAVNARDTDPAAWLQKEIGGAHGVLVTAVSPKAFSQAIGMV 253
Query: 266 KVAGVYVLVGFP 277
+ G L G P
Sbjct: 254 RRGGTIALNGLP 265
>pdb|4EEX|A Chain A, Crystal Structure Of Lactococcus Lactis Alcohol
Dehydrogenase
pdb|4EEX|B Chain B, Crystal Structure Of Lactococcus Lactis Alcohol
Dehydrogenase
Length = 348
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 123/268 (45%), Gaps = 16/268 (5%)
Query: 17 DPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVK 76
+P G RA+ ++ + + +CGVC+ D+ +G+ K V GHE +GIVK
Sbjct: 9 NPDGYADLVEKELRAIKPNEALLDMEYCGVCHTDLHVAAGDYGN-KAGTVLGHEGIGIVK 67
Query: 77 EVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYS 136
E+G +VS +VGD V V + C CEYC G E C R V NA G GG +
Sbjct: 68 EIGADVSSLQVGDRVSVAWFFEGCGHCEYCVSGNETFC-REVK--NA----GYSVDGGMA 120
Query: 137 SYIVVHERYCYKIANDYXXXXXXXXXXXGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMA 196
+V Y K+ + G+T Y + + +PG + G GGLG++A
Sbjct: 121 EEAIVVADYAVKVPDGLDPIEASSITCAGVTTYKAIKVSGV-KPGDWQVIFGAGGLGNLA 179
Query: 197 VKFGK-AFGLNVTVLSTSTSKKEEALSLLGADKFVVSSD---LEQMKAL--GKSLDFIID 250
+++ K FG V + + K A +GAD + S D ++++K + G + I
Sbjct: 180 IQYAKNVFGAKVIAVDINQDKLNLA-KKIGADVIINSGDVNPVDEIKKITGGLGVQSAIV 238
Query: 251 TASGDHPFDAYMSLLKVAGVYVLVGFPS 278
A F+ ++ LK G V V P+
Sbjct: 239 CAVARIAFEQAVASLKPMGKMVAVALPN 266
>pdb|3MEQ|A Chain A, Crystal Structure Of Alcohol Dehydrogenase From Brucella
Mel
pdb|3MEQ|B Chain B, Crystal Structure Of Alcohol Dehydrogenase From Brucella
Mel
pdb|3MEQ|C Chain C, Crystal Structure Of Alcohol Dehydrogenase From Brucella
Mel
pdb|3MEQ|D Chain D, Crystal Structure Of Alcohol Dehydrogenase From Brucella
Mel
Length = 365
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 108/254 (42%), Gaps = 21/254 (8%)
Query: 33 GSDDVSITITHCGVCYADVIWTRNKHGD----SKYPLVPGHEIVGIVKEVGHNVSRFKVG 88
G + + I GVC+ D+ GD P +PGHE VG V VG V K G
Sbjct: 49 GPGQIQVAIQASGVCHTDL---HAAEGDWPVKPNPPFIPGHEGVGFVSAVGSGVKHVKEG 105
Query: 89 DHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYK 148
D VG+ +C C +C G E C + T G GG++ Y+V +
Sbjct: 106 DRVGIPWLYTACGHCRHCLGGWETLCEEQLNT-------GYSVNGGFAEYVVADPNFVGH 158
Query: 149 IANDYXXXXXXXXXXXGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVT 208
+ + G+TVY ++ +PG + + G+GGLGHMAV++ +A GLNV
Sbjct: 159 LPKNIDFNEIAPVLCAGVTVYK-GLKVTDTKPGDWVVISGIGGLGHMAVQYARAMGLNVA 217
Query: 209 VLSTSTSKKEEALSLLGADKFVVSSDLEQMKA-LGKSLD----FIIDTASGDHPFDAYMS 263
+ K + A LGA V + + A + K D ++ TA F+ +
Sbjct: 218 AVDIDDRKLDLA-RRLGATVTVNAKTVADPAAYIRKETDGGAQGVLVTAVSPKAFEQALG 276
Query: 264 LLKVAGVYVLVGFP 277
++ G L G P
Sbjct: 277 MVARGGTVSLNGLP 290
>pdb|4EEZ|A Chain A, Crystal Structure Of Lactococcus Lactis Alcohol
Dehydrogenase Variant Re1
pdb|4EEZ|B Chain B, Crystal Structure Of Lactococcus Lactis Alcohol
Dehydrogenase Variant Re1
Length = 348
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 122/268 (45%), Gaps = 16/268 (5%)
Query: 17 DPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVK 76
+P G RA+ ++ + + +CGVC+ D+ G+ K V GHE +GIVK
Sbjct: 9 NPDGYADLVEKELRAIKPNEALLDMEYCGVCHTDLHVAAGDFGN-KAGTVLGHEGIGIVK 67
Query: 77 EVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYS 136
E+G +VS +VGD V V + C CEYC G E C R V NA G GG +
Sbjct: 68 EIGADVSSLQVGDRVSVAWFFEGCGHCEYCVSGNETFC-REVK--NA----GYSVDGGMA 120
Query: 137 SYIVVHERYCYKIANDYXXXXXXXXXXXGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMA 196
+V Y K+ + G+T Y + + +PG + G GGLG++A
Sbjct: 121 EEAIVVADYAVKVPDGLDPIEASSITCAGVTTYKAIKVSGV-KPGDWQVIFGAGGLGNLA 179
Query: 197 VKFGK-AFGLNVTVLSTSTSKKEEALSLLGADKFVVSSD---LEQMKAL--GKSLDFIID 250
+++ K FG V + + K A +GAD + S D ++++K + G + I
Sbjct: 180 IQYAKNVFGAKVIAVDINQDKLNLA-KKIGADVTINSGDVNPVDEIKKITGGLGVQSAIV 238
Query: 251 TASGDHPFDAYMSLLKVAGVYVLVGFPS 278
A F+ ++ LK G V V P+
Sbjct: 239 CAVARIAFEQAVASLKPMGKMVAVAVPN 266
>pdb|2HCY|A Chain A, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
pdb|2HCY|B Chain B, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
pdb|2HCY|C Chain C, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
pdb|2HCY|D Chain D, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
Length = 347
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 115/259 (44%), Gaps = 24/259 (9%)
Query: 34 SDDVSITITHCGVCYADV-IWTRNKHGD----SKYPLVPGHEIVGIVKEVGHNVSRFKVG 88
++++ I + + GVC+ D+ W HGD K PLV GHE G+V +G NV +K+G
Sbjct: 30 ANELLINVKYSGVCHTDLHAW----HGDWPLPVKLPLVGGHEGAGVVVGMGENVKGWKIG 85
Query: 89 DHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYK 148
D+ G+ SC CEYC G E +C + D G G + Y
Sbjct: 86 DYAGIKWLNGSCMACEYCELGNESNCPHA-------DLSGYTHDGSFQQYATADAVQAAH 138
Query: 149 IANDYXXXXXXXXXXXGITVYTPMMRHKMNQPGKSLGVIG-LGGLGHMAVKFGKAFGLNV 207
I GITVY + + G + + G GGLG +AV++ KA G V
Sbjct: 139 IPQGTDLAQVAPILCAGITVYKALKSANL-MAGHWVAISGAAGGLGSLAVQYAKAMGYRV 197
Query: 208 TVLSTSTSKKEEALSLLGADKFV-VSSDLEQMKALGKSLD----FIIDTASGDHPFDAYM 262
+ KEE +G + F+ + + + + A+ K+ D +I+ + + +A
Sbjct: 198 LGIDGGEG-KEELFRSIGGEVFIDFTKEKDIVGAVLKATDGGAHGVINVSVSEAAIEAST 256
Query: 263 SLLKVAGVYVLVGFPSKVK 281
++ G VLVG P+ K
Sbjct: 257 RYVRANGTTVLVGMPAGAK 275
>pdb|2EER|A Chain A, Structural Study Of Project Id St2577 From Sulfolobus
Tokodaii Strain7
pdb|2EER|B Chain B, Structural Study Of Project Id St2577 From Sulfolobus
Tokodaii Strain7
Length = 347
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 116/257 (45%), Gaps = 27/257 (10%)
Query: 36 DVSITITHCGVCYADVIWTRNKHGD--------SKYPLVPGHEIVGIVKEVGHNVSRFKV 87
V I I GVC++DV + + G+ K P+ GHEI G ++EVG V +
Sbjct: 27 QVLIKIEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGRIEEVGDEVVGYSK 86
Query: 88 GDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVV-HERYC 146
GD V V + +C YC G E C + I+ DG Y+ Y++V H +Y
Sbjct: 87 GDLVAVNPWEGEG-NCYYCRIGEEHLCDSPRWL--GINYDGA-----YAEYVLVPHYKYL 138
Query: 147 YKIANDYXXXXXXXXXXXGITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGL 205
YK+ G+T Y + + ++ P K+L VIG GGLG MA++ KA
Sbjct: 139 YKL-RRLSAVEAAPLTCSGVTTYRAVRKASLD-PSKTLVVIGAGGGLGTMAIQIAKAVS- 195
Query: 206 NVTVLSTSTSKKE-EALSLLGADKFVVSSDLEQMKAL-----GKSLDFIIDTASGDHPFD 259
T++ ++ EA GAD + +S + + + GK D +ID + +
Sbjct: 196 GATIIGVDVREEALEAAKRAGADYVINASSQDPVSEIRRITQGKGADAVIDLNNSEKTLS 255
Query: 260 AYMSLLKVAGVYVLVGF 276
Y +L G YV+VG
Sbjct: 256 IYPYVLAKQGKYVMVGL 272
>pdb|1E3J|A Chain A, Ketose Reductase (Sorbitol Dehydrogenase) From Silverleaf
Whitefly
Length = 352
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 121/265 (45%), Gaps = 26/265 (9%)
Query: 34 SDDVSITITHCGVCYADVIWTRNKHGD-----SKYPLVPGHEIVGIVKEVGHNVSRFKVG 88
D+V + + + G+C +DV + +HG K P+V GHE G V +VG NV K G
Sbjct: 28 EDEVLLQMAYVGICGSDVHYY--EHGRIADFIVKDPMVIGHEASGTVVKVGKNVKHLKKG 85
Query: 89 DHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYK 148
D V V V CR C++C +G C TF A D G + Y V +C+K
Sbjct: 86 DRVAVEPGV-PCRRCQFCKEGKYNLCPD--LTFCATPPD----DGNLARYYVHAADFCHK 138
Query: 149 IANDYXXXXXXXXXXXGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVT 208
+ ++ + V+ R Q G ++ VIG G +G ++V KA+G V
Sbjct: 139 LPDNVSLEEGALLEPLSVGVHA--CRRAGVQLGTTVLVIGAGPIGLVSVLAAKAYGAFV- 195
Query: 209 VLSTSTSKKEEALSLLGADKFVV--------SSDLEQMK-ALGKSLDFIIDTASGDHPFD 259
V + + ++ E GAD +V SS +E+++ A+G + ID + +
Sbjct: 196 VCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGDLPNVTIDCSGNEKCIT 255
Query: 260 AYMSLLKVAGVYVLVGFPSKVKFSP 284
+++ + G +LVG S++ P
Sbjct: 256 IGINITRTGGTLMLVGMGSQMVTVP 280
>pdb|2XAA|A Chain A, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm
44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol
pdb|2XAA|B Chain B, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm
44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol
pdb|2XAA|C Chain C, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm
44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol
pdb|2XAA|D Chain D, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm
44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol
pdb|3JV7|A Chain A, Structure Of Adh-A From Rhodococcus Ruber
pdb|3JV7|B Chain B, Structure Of Adh-A From Rhodococcus Ruber
pdb|3JV7|C Chain C, Structure Of Adh-A From Rhodococcus Ruber
pdb|3JV7|D Chain D, Structure Of Adh-A From Rhodococcus Ruber
Length = 345
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 113/263 (42%), Gaps = 24/263 (9%)
Query: 33 GSDDVSITITHCGVCYADVIWTRNKHGDSKY--PLVPGHEIVGIVKEVGHNVSRFKVGDH 90
G ++ + +T G+C++D+ Y PL GHE VG V E+G V+ F VGD
Sbjct: 24 GPGEILLKVTAAGLCHSDIFVMDMPAAQYAYGLPLTLGHEGVGTVAELGEGVTGFGVGDA 83
Query: 91 VGV-GTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKI 149
V V G + C C C G E +C R+ I G + G + Y++V
Sbjct: 84 VAVYGPW--GCGACHACARGRENYCTRAADL--GITPPGLGSPGSMAEYMIVDSARHLVP 139
Query: 150 ANDYXXXXXXXXXXXGITVYTPMMR-HKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVT 208
D G+T Y + R + PG + VIG+GGLGH+ ++ +A
Sbjct: 140 IGDLDPVAAAPLTDAGLTPYHAISRVLPLLGPGSTAVVIGVGGLGHVGIQILRAVS-AAR 198
Query: 209 VLSTSTSKKEEALSL-LGADKFVVSS--------DLEQMKALGKSLDFI-----IDTASG 254
V++ AL+ +GAD V S +L + DF+ IDTA
Sbjct: 199 VIAVDLDDDRLALAREVGADAAVKSGAGAADAIRELTGGQGATAVFDFVGAQSTIDTAQQ 258
Query: 255 DHPFDAYMSLLKV-AGVYVLVGF 276
D ++S++ + AG + VGF
Sbjct: 259 VVAVDGHISVVGIHAGAHAKVGF 281
>pdb|1H2B|A Chain A, Crystal Structure Of The Alcohol Dehydrogenase From The
Hyperthermophilic Archaeon Aeropyrum Pernix At 1.65a
Resolution
pdb|1H2B|B Chain B, Crystal Structure Of The Alcohol Dehydrogenase From The
Hyperthermophilic Archaeon Aeropyrum Pernix At 1.65a
Resolution
Length = 359
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 121/272 (44%), Gaps = 35/272 (12%)
Query: 30 RAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVP---GHEIVGIVKEVGHNVSRFK 86
R G DV + I GVC+ D+ + + P +P GHE VG ++EV V +
Sbjct: 37 RLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVGYIEEVAEGVEGLE 96
Query: 87 VGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYC 146
GD V + V C C G ++HC F ++ DG G++ ++ R
Sbjct: 97 KGDPVILHPAVTDG-TCLACRAGEDMHCEN--LEFPGLNIDG-----GFAEFMRTSHRSV 148
Query: 147 YKIANDYXXXXXXXXXX---XGITVYTPMMRH-KMNQPGKSLGVIGLGGLGHMAVKFGKA 202
K+ D GIT Y + + + PG + ++G+GGLGH+AV+ K
Sbjct: 149 IKLPKDISREKLVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKV 208
Query: 203 FGLNVTVLSTSTSKKEEALSL---LGADKFVVSS--------DLEQMKALGKSLDFIIDT 251
TV++ KEE L L LGAD V + +L + + + ++DF+
Sbjct: 209 M-TPATVIALDV--KEEKLKLAERLGADHVVDARRDPVKQVMELTRGRGVNVAMDFVGSQ 265
Query: 252 ASGDH-PFDAYMSLLKVAGVYVLVGFPSKVKF 282
A+ D+ P+ LL G ++VG+ +++F
Sbjct: 266 ATVDYTPY-----LLGRMGRLIIVGYGGELRF 292
>pdb|3UKO|A Chain A, Crystal Structure Of S-Nitrosoglutathione Reductase From
Arabidopsis Thaliana, Complex With Nadh
pdb|3UKO|B Chain B, Crystal Structure Of S-Nitrosoglutathione Reductase From
Arabidopsis Thaliana, Complex With Nadh
pdb|4GL4|A Chain A, Crystal Structure Of Oxidized S-nitrosoglutathione
Reductase From Arabidopsis Thalina, Complex With Nadh
pdb|4GL4|B Chain B, Crystal Structure Of Oxidized S-nitrosoglutathione
Reductase From Arabidopsis Thalina, Complex With Nadh
Length = 378
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 108/278 (38%), Gaps = 25/278 (8%)
Query: 10 CLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGH 69
C A +P+ L + +V I I + +C+ D K + +P + GH
Sbjct: 9 CKAAVAYEPNKPLVIEDVQVAPPQAGEVRIKILYTALCHTDAYTWSGKDPEGLFPCILGH 68
Query: 70 EIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCA-------------- 115
E GIV+ VG V+ + GDHV + Y CR+C++C G C
Sbjct: 69 EAAGIVESVGEGVTEVQAGDHV-IPCYQAECRECKFCKSGKTNLCGKVRSATGVGIMMND 127
Query: 116 -RSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYXXXXXXXXXXXGITVYTPMMR 174
+S ++ N + +S Y VVH+ KI T +
Sbjct: 128 RKSRFSVNGKPIYHFMGTSTFSQYTVVHDVSVAKIDPTAPLDKVCLLGCGVPTGLGAVWN 187
Query: 175 HKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSD 234
+PG ++ + GLG +G + K G + + SKK E G ++FV D
Sbjct: 188 TAKVEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVNEFVNPKD 247
Query: 235 LEQMKALGKSLDFIIDTASG--DHPFDAY--MSLLKVA 268
++ + I+D G D+ F+ +S+++ A
Sbjct: 248 HDK-----PIQEVIVDLTDGGVDYSFECIGNVSVMRAA 280
>pdb|1R37|A Chain A, Alcohol Dehydrogenase From Sulfolobus Solfataricus
Complexed With Nad(H) And 2-Ethoxyethanol
pdb|1R37|B Chain B, Alcohol Dehydrogenase From Sulfolobus Solfataricus
Complexed With Nad(H) And 2-Ethoxyethanol
Length = 347
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 108/256 (42%), Gaps = 25/256 (9%)
Query: 36 DVSITITHCGVCYADVIWTRNKHGD--------SKYPLVPGHEIVGIVKEVGHNVSRFKV 87
V I + GVC++DV + + G+ K P+ GHEI G ++EVG V +
Sbjct: 27 QVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVGDEVVGYSK 86
Query: 88 GDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVV-HERYC 146
GD V V + +C YC G E C + G G Y+ Y++V H +Y
Sbjct: 87 GDLVAVNPWQGEG-NCYYCRIGEEHLCDSPRWL-------GINFDGAYAEYVIVPHYKYM 138
Query: 147 YKIANDYXXXXXXXXXXXGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLN 206
YK+ GIT Y + + ++ L V GGLG MAV+ KA
Sbjct: 139 YKL-RRLNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVS-G 196
Query: 207 VTVLSTSTSKKE-EALSLLGADKFVVSSDLEQMKAL-----GKSLDFIIDTASGDHPFDA 260
T++ ++ EA GAD + +S + + + K +D +ID + +
Sbjct: 197 ATIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITESKGVDAVIDLNNSEKTLSV 256
Query: 261 YMSLLKVAGVYVLVGF 276
Y L G YV+VG
Sbjct: 257 YPKALAKQGKYVMVGL 272
>pdb|3COS|A Chain A, Crystal Structure Of Human Class Ii Alcohol Dehydrogenase
(Adh4) In Complex With Nad And Zn
pdb|3COS|B Chain B, Crystal Structure Of Human Class Ii Alcohol Dehydrogenase
(Adh4) In Complex With Nad And Zn
pdb|3COS|C Chain C, Crystal Structure Of Human Class Ii Alcohol Dehydrogenase
(Adh4) In Complex With Nad And Zn
pdb|3COS|D Chain D, Crystal Structure Of Human Class Ii Alcohol Dehydrogenase
(Adh4) In Complex With Nad And Zn
Length = 381
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 106/280 (37%), Gaps = 30/280 (10%)
Query: 8 KDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVP 67
K + W A P L + +V I I +C+ D +K +P++
Sbjct: 12 KAAIAWEAGKP---LCIEEVEVAPPKAHEVRIQIIATSLCHTDATVIDSKFEGLAFPVIV 68
Query: 68 GHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDAD 127
GHE GIV+ +G V+ K GD V + Y CR C++C L C + + + +D
Sbjct: 69 GHEAAGIVESIGPGVTNVKPGDKV-IPLYAPLCRKCKFCLSPLTNLCGK-ISNLKSPASD 126
Query: 128 GTITK-------------------GGYSSYIVVHERYCYKIANDYXXXXXXXXXXXGITV 168
+ + +S Y VV + KI +D T
Sbjct: 127 QQLMEDKTSRFTCKGKPVYHFFGTSTFSQYTVVSDINLAKIDDDANLERVCLLGCGFSTG 186
Query: 169 YTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADK 228
Y + + PG + V GLGG+G AV KA G + + S+K LGA
Sbjct: 187 YGAAINNAKVTPGSTCAVFGLGGVGLSAVMGCKAAGASRIIGIDINSEKFVKAKALGATD 246
Query: 229 FVVSSDL-----EQMKALGK-SLDFIIDTASGDHPFDAYM 262
+ DL E + L K +DF +D A G A +
Sbjct: 247 CLNPRDLHKPIQEVIIELTKGGVDFALDCAGGSETMKAAL 286
>pdb|2DFV|A Chain A, Hyperthermophilic Threonine Dehydrogenase From Pyrococcus
Horikoshii
pdb|2DFV|B Chain B, Hyperthermophilic Threonine Dehydrogenase From Pyrococcus
Horikoshii
pdb|2DFV|C Chain C, Hyperthermophilic Threonine Dehydrogenase From Pyrococcus
Horikoshii
Length = 347
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 119/277 (42%), Gaps = 33/277 (11%)
Query: 33 GSDDVSITITHCGVCYADV-IWTRNKHGDS--KYPLVPGHEIVGIVKEVGHNVSRFKVGD 89
G +V I + +C D+ I+ N+ S K P + GHE+ G V E+G V +VGD
Sbjct: 27 GPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIXGHEVAGEVVEIGPGVEGIEVGD 86
Query: 90 HVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYK- 148
+V V T++ C C C G + H ++ F +D DG ++ Y VV + +K
Sbjct: 87 YVSVETHI-VCGKCYACRRG-QYHVCQNTKIF-GVDTDGV-----FAEYAVVPAQNIWKN 138
Query: 149 ---IANDYXXXXXXXXXXXGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL 205
I +Y + P+ GKS+ + G G LG + + KA G
Sbjct: 139 PKSIPPEYATLQEPLGNAVDTVLAGPIS-------GKSVLITGAGPLGLLGIAVAKASGA 191
Query: 206 NVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKAL-----GKSLDFIIDTASGDHPFDA 260
++S + + E +GAD + + + +K + G +D ++ + +
Sbjct: 192 YPVIVSEPSDFRRELAKKVGADYVINPFEEDVVKEVXDITDGNGVDVFLEFSGAPKALEQ 251
Query: 261 YMSLLKVAGVYVLVG-FPSKVKFSPASLNIGNAPLFR 296
+ + AG L+G +P KV +++ N +F+
Sbjct: 252 GLQAVTPAGRVSLLGLYPGKV-----TIDFNNLIIFK 283
>pdb|2D8A|A Chain A, Crystal Structure Of Ph0655 From Pyrococcus Horikoshii Ot3
Length = 348
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 119/277 (42%), Gaps = 33/277 (11%)
Query: 33 GSDDVSITITHCGVCYADV-IWTRNKHGDS--KYPLVPGHEIVGIVKEVGHNVSRFKVGD 89
G +V I + +C D+ I+ N+ S K P + GHE+ G V E+G V +VGD
Sbjct: 28 GPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIXGHEVAGEVVEIGPGVEGIEVGD 87
Query: 90 HVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYK- 148
+V V T++ C C C G + H ++ F +D DG ++ Y VV + +K
Sbjct: 88 YVSVETHI-VCGKCYACRRG-QYHVCQNTKIF-GVDTDGV-----FAEYAVVPAQNIWKN 139
Query: 149 ---IANDYXXXXXXXXXXXGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL 205
I +Y + P+ GKS+ + G G LG + + KA G
Sbjct: 140 PKSIPPEYATLQEPLGNAVDTVLAGPIS-------GKSVLITGAGPLGLLGIAVAKASGA 192
Query: 206 NVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKAL-----GKSLDFIIDTASGDHPFDA 260
++S + + E +GAD + + + +K + G +D ++ + +
Sbjct: 193 YPVIVSEPSDFRRELAKKVGADYVINPFEEDVVKEVXDITDGNGVDVFLEFSGAPKALEQ 252
Query: 261 YMSLLKVAGVYVLVG-FPSKVKFSPASLNIGNAPLFR 296
+ + AG L+G +P KV +++ N +F+
Sbjct: 253 GLQAVTPAGRVSLLGLYPGKV-----TIDFNNLIIFK 284
>pdb|1NTO|A Chain A, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|B Chain B, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|C Chain C, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|D Chain D, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|E Chain E, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|H Chain H, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NVG|A Chain A, N249y Mutant Of The Alcohol Dehydrogenase From The
Archaeon Sulfolobus Solfataricus-tetragonal Crystal Form
Length = 347
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 107/256 (41%), Gaps = 25/256 (9%)
Query: 36 DVSITITHCGVCYADVIWTRNKHGD--------SKYPLVPGHEIVGIVKEVGHNVSRFKV 87
V I + GVC++DV + + G+ K P+ GHEI G ++EVG V +
Sbjct: 27 QVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVGDEVVGYSK 86
Query: 88 GDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVV-HERYC 146
GD V V + +C YC G E C + G G Y+ Y++V H +Y
Sbjct: 87 GDLVAVNPWQGEG-NCYYCRIGEEHLCDSPRWL-------GINFDGAYAEYVIVPHYKYM 138
Query: 147 YKIANDYXXXXXXXXXXXGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLN 206
YK+ GIT Y + + ++ L V GGLG MAV+ KA
Sbjct: 139 YKL-RRLNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVS-G 196
Query: 207 VTVLSTSTSKKE-EALSLLGADKFVVSSDLEQMKAL-----GKSLDFIIDTASGDHPFDA 260
T++ ++ EA GAD + +S + + + K +D +ID +
Sbjct: 197 ATIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITESKGVDAVIDLNYSEKTLSV 256
Query: 261 YMSLLKVAGVYVLVGF 276
Y L G YV+VG
Sbjct: 257 YPKALAKQGKYVMVGL 272
>pdb|1D1T|A Chain A, Mutant Of Human Sigma Alcohol Dehydrogenase With Leucine
At Position 141
pdb|1D1T|B Chain B, Mutant Of Human Sigma Alcohol Dehydrogenase With Leucine
At Position 141
pdb|1D1T|C Chain C, Mutant Of Human Sigma Alcohol Dehydrogenase With Leucine
At Position 141
pdb|1D1T|D Chain D, Mutant Of Human Sigma Alcohol Dehydrogenase With Leucine
At Position 141
Length = 373
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 115/286 (40%), Gaps = 31/286 (10%)
Query: 23 SPYSFNRRAVG---SDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVG 79
P+S V + +V I I G+C D + SK+P++ GHE GIV+ +G
Sbjct: 19 QPFSIEEIEVAPPKTKEVRIKILATGICRTDDHVIKGTM-VSKFPVIVGHEATGIVESIG 77
Query: 80 HNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGT---------- 129
V+ K GD V + ++ CR+C C + C RS T + ADGT
Sbjct: 78 EGVTTVKPGDKV-IPLFLPQCRECNACRNPDGNLCIRSDITGRGVLADGTTRFTCKGKPV 136
Query: 130 ---ITKGGYSSYIVVHERYCYKIANDYXXXXXXXXXXXGITVYTPMMRHKMNQPGKSLGV 186
+ ++ Y VV E KI + T Y ++ +PG + V
Sbjct: 137 HHFLNTSTFTEYTVVDESSVAKIDDAAPPEKVCLIGCGFSTGYGAAVKTGKVKPGSTCVV 196
Query: 187 IGLGGLGHMAVKFGKAFGLNVTV-LSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSL 245
GLGG+G + K+ G + + + + K E+A++ +GA + + D K + + L
Sbjct: 197 FGLGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMA-VGATECISPKD--STKPISEVL 253
Query: 246 DFIIDTASG---------DHPFDAYMSLLKVAGVYVLVGFPSKVKF 282
+ G + DA S G V+VG P K
Sbjct: 254 SEMTGNNVGYTFEVIGHLETMIDALASCHMNYGTSVVVGVPPSAKM 299
>pdb|1AGN|A Chain A, X-Ray Structure Of Human Sigma Alcohol Dehydrogenase
pdb|1AGN|B Chain B, X-Ray Structure Of Human Sigma Alcohol Dehydrogenase
pdb|1AGN|C Chain C, X-Ray Structure Of Human Sigma Alcohol Dehydrogenase
pdb|1AGN|D Chain D, X-Ray Structure Of Human Sigma Alcohol Dehydrogenase
pdb|1D1S|A Chain A, Wild-type Human Sigma (class Iv) Alcohol Dehydrogenase
pdb|1D1S|B Chain B, Wild-type Human Sigma (class Iv) Alcohol Dehydrogenase
pdb|1D1S|C Chain C, Wild-type Human Sigma (class Iv) Alcohol Dehydrogenase
pdb|1D1S|D Chain D, Wild-type Human Sigma (class Iv) Alcohol Dehydrogenase
Length = 373
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 115/286 (40%), Gaps = 31/286 (10%)
Query: 23 SPYSFNRRAVG---SDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVG 79
P+S V + +V I I G+C D + SK+P++ GHE GIV+ +G
Sbjct: 19 QPFSIEEIEVAPPKTKEVRIKILATGICRTDDHVIKGTM-VSKFPVIVGHEATGIVESIG 77
Query: 80 HNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGT---------- 129
V+ K GD V + ++ CR+C C + C RS T + ADGT
Sbjct: 78 EGVTTVKPGDKV-IPLFLPQCRECNACRNPDGNLCIRSDITGRGVLADGTTRFTCKGKPV 136
Query: 130 ---ITKGGYSSYIVVHERYCYKIANDYXXXXXXXXXXXGITVYTPMMRHKMNQPGKSLGV 186
+ ++ Y VV E KI + T Y ++ +PG + V
Sbjct: 137 HHFMNTSTFTEYTVVDESSVAKIDDAAPPEKVCLIGCGFSTGYGAAVKTGKVKPGSTCVV 196
Query: 187 IGLGGLGHMAVKFGKAFGLNVTV-LSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSL 245
GLGG+G + K+ G + + + + K E+A++ +GA + + D K + + L
Sbjct: 197 FGLGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMA-VGATECISPKD--STKPISEVL 253
Query: 246 DFIIDTASG---------DHPFDAYMSLLKVAGVYVLVGFPSKVKF 282
+ G + DA S G V+VG P K
Sbjct: 254 SEMTGNNVGYTFEVIGHLETMIDALASCHMNYGTSVVVGVPPSAKM 299
>pdb|2H6E|A Chain A, Crystal Structure Of The D-Arabinose Dehydrogenase From
Sulfolobus Solfataricus
Length = 344
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 111/261 (42%), Gaps = 32/261 (12%)
Query: 35 DDVSITITHCGVCYADV-IW--TRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHV 91
++V I I GVC D+ +W K G + P++ GHE G + EVG +++ K GD+V
Sbjct: 29 EEVLIRIGGAGVCRTDLRVWKGVEAKQG-FRLPIILGHENAGTIVEVGE-LAKVKKGDNV 86
Query: 92 GV-GTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHE-RYCYKI 149
V T+ + C YC +G C + G T GG+S Y++V R+ K+
Sbjct: 87 VVYATWGDLT--CRYCREGKFNICKNQIIP-------GQTTNGGFSEYMLVKSSRWLVKL 137
Query: 150 ANDYXXXXXXXXXXXGITVYTPMMR-----HKMNQPGKSLGVIGLGGLGHMAVKFGKAFG 204
N G T + + K +P + V G+GGL ++ KA
Sbjct: 138 -NSLSPVEAAPLADAGTTSMGAIRQALPFISKFAEP--VVIVNGIGGLAVYTIQILKALM 194
Query: 205 LNVTVLSTSTSKKEEALSL-LGADKFVVSSDLEQM-----KALGKSLDFIIDTASGDHPF 258
N+T++ S SKK +L LGAD D E + LG S+ ID +
Sbjct: 195 KNITIVGISRSKKHRDFALELGADYVSEMKDAESLINKLTDGLGASI--AIDLVGTEETT 252
Query: 259 DAYMSLLKVAGVYVLVGFPSK 279
LL G +LVG K
Sbjct: 253 YNLGKLLAQEGAIILVGMEGK 273
>pdb|3I4C|A Chain A, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|B Chain B, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|C Chain C, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|D Chain D, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|E Chain E, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|H Chain H, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
Length = 347
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 107/256 (41%), Gaps = 25/256 (9%)
Query: 36 DVSITITHCGVCYADVIWTRNKHGD--------SKYPLVPGHEIVGIVKEVGHNVSRFKV 87
V I + GVC++DV + + G+ K P+ GHEI G ++EVG V +
Sbjct: 27 QVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVGDEVVGYSK 86
Query: 88 GDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVV-HERYC 146
GD V V + +C YC G E C + G G Y+ Y++V H +Y
Sbjct: 87 GDLVAVNP-LQGEGNCYYCRIGEEHLCDSPRWL-------GINFDGAYAEYVIVPHYKYM 138
Query: 147 YKIANDYXXXXXXXXXXXGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLN 206
YK+ GIT Y + + ++ L V GGLG MAV+ KA
Sbjct: 139 YKL-RRLNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVS-G 196
Query: 207 VTVLSTSTSKKE-EALSLLGADKFVVSSDLEQMKAL-----GKSLDFIIDTASGDHPFDA 260
T++ ++ EA GAD + +S + + + K +D +ID +
Sbjct: 197 ATIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITESKGVDAVIDLNYSEKTLSV 256
Query: 261 YMSLLKVAGVYVLVGF 276
Y L G YV+VG
Sbjct: 257 YPKALAKQGKYVMVGL 272
>pdb|2DQ4|A Chain A, Crystal Structure Of Threonine 3-Dehydrogenase
pdb|2DQ4|B Chain B, Crystal Structure Of Threonine 3-Dehydrogenase
pdb|2EJV|A Chain A, Crystal Structure Of Threonine 3-Dehydrogenase Complexed
With Nad+
pdb|2EJV|B Chain B, Crystal Structure Of Threonine 3-Dehydrogenase Complexed
With Nad+
Length = 343
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 112/258 (43%), Gaps = 19/258 (7%)
Query: 33 GSDDVSITITHCGVCYADV-IWTRNK--HGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGD 89
G ++ + + +C D+ IW + G + PLV GHE G+V+ VG V R +VGD
Sbjct: 24 GPGEILVRVEAASICGTDLHIWKWDAWARGRIRPPLVTGHEFSGVVEAVGPGVRRPQVGD 83
Query: 90 HVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKI 149
HV + +++ C C C G C + +D D GG++ Y+VV +
Sbjct: 84 HVSLESHI-VCHACPACRTGNYHVCLNT--QILGVDRD-----GGFAEYVVVPAENAWVN 135
Query: 150 ANDYXXXXXXXXXXXGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTV 209
D G V+T ++ GKS+ + G G +G MA +A G +
Sbjct: 136 PKDLPFEVAAILEPFGNAVHTVYAGSGVS--GKSVLITGAGPIGLMAAMVVRASGAG-PI 192
Query: 210 LSTSTSKKEEALSLLGADKFV--VSSDLEQM--KALGKSLDFIIDTASGDHPFDAYMSLL 265
L + + A + AD+ V + DL ++ + G ++ +++ + + + L
Sbjct: 193 LVSDPNPYRLAFARPYADRLVNPLEEDLLEVVRRVTGSGVEVLLEFSGNEAAIHQGLMAL 252
Query: 266 KVAGVYVLVGFPS-KVKF 282
G ++G PS ++F
Sbjct: 253 IPGGEARILGIPSDPIRF 270
>pdb|4DL9|A Chain A, Crystal Structure Of S-nitrosoglutathione Reductase From
Tomato (solanum Lycopersicum) In Complex With Nad+
pdb|4DL9|B Chain B, Crystal Structure Of S-nitrosoglutathione Reductase From
Tomato (solanum Lycopersicum) In Complex With Nad+
pdb|4DLA|A Chain A, Crystal Structure Of S-nitrosoglutathione Reductase
Apoenzyme From Tomato (solanum Lycopersicum)
pdb|4DLA|B Chain B, Crystal Structure Of S-nitrosoglutathione Reductase
Apoenzyme From Tomato (solanum Lycopersicum)
pdb|4DLB|A Chain A, Structure Of S-nitrosoglutathione Reductase From Tomato
(solanum Lycopersicum) Crystallized In Presence Of Nadh
And Glutathione
pdb|4DLB|B Chain B, Structure Of S-nitrosoglutathione Reductase From Tomato
(solanum Lycopersicum) Crystallized In Presence Of Nadh
And Glutathione
Length = 396
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 92/243 (37%), Gaps = 16/243 (6%)
Query: 10 CLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGH 69
C A +P+ L + +V + + + +C+ D K + +P V GH
Sbjct: 27 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRVKVLYTALCHTDAYTWSGKDPEGLFPCVLGH 86
Query: 70 EIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCA-------------- 115
E GIV+ VG V+ + GDHV + Y CR+C++C G C
Sbjct: 87 EAAGIVESVGEGVTEVQPGDHV-IPCYQAECRECKFCKSGKTNLCGKVRAATGVGVMMND 145
Query: 116 -RSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYXXXXXXXXXXXGITVYTPMMR 174
+S ++ N + +S Y VVH+ KI T +
Sbjct: 146 RKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPVAPLEKVCLLGCGVPTGLGAVWN 205
Query: 175 HKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSD 234
+PG + V GLG +G + KA G + + SKK + G +F+ +
Sbjct: 206 TAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRIIGIDIDSKKFDRAKNFGVTEFINPKE 265
Query: 235 LEQ 237
EQ
Sbjct: 266 HEQ 268
>pdb|4A2C|A Chain A, Crystal Structure Of Galactitol-1-Phosphate Dehydrogenase
From Escherichia Coli
pdb|4A2C|B Chain B, Crystal Structure Of Galactitol-1-Phosphate Dehydrogenase
From Escherichia Coli
Length = 346
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 98/225 (43%), Gaps = 18/225 (8%)
Query: 34 SDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGV 93
D+V + I G+C +D+ K+G YP+ GHE G + VG V GD V
Sbjct: 25 QDEVRVKIASSGLCGSDLPRI-FKNGAHYYPITLGHEFSGYIDAVGSGVDDLHPGDAVAC 83
Query: 94 GTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDY 153
+ C C C G CA+ D G+ GG++ YIVV + + + D
Sbjct: 84 VPLL-PCFTCPECLKGFYSQCAK-------YDFIGSRRDGGFAEYIVVKRKNVFALPTDM 135
Query: 154 XXXXXXXXXXXGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLST 212
ITV K++ +IG G +G +A++ A G +VT +
Sbjct: 136 PIEDGAFIEP--ITVGLHAFHLAQGCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDI 193
Query: 213 STSKKEEALSLLGADKFVVSSDLE--QMKALGKSLDF---IIDTA 252
S+ K A S GA + SS++ QM+++ + L F I++TA
Sbjct: 194 SSEKLALAKS-FGAMQTFNSSEMSAPQMQSVLRELRFNQLILETA 237
>pdb|1CDO|A Chain A, Alcohol Dehydrogenase (E.C.1.1.1.1) (Ee Isozyme) Complexed
With Nicotinamide Adenine Dinucleotide (Nad), And Zinc
pdb|1CDO|B Chain B, Alcohol Dehydrogenase (E.C.1.1.1.1) (Ee Isozyme) Complexed
With Nicotinamide Adenine Dinucleotide (Nad), And Zinc
Length = 374
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 113/291 (38%), Gaps = 27/291 (9%)
Query: 8 KDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVI-WTRNKHGDSKYPLV 66
K + W A P L ++++ I I GVC+ D+ KH D +P+V
Sbjct: 10 KAAVAWEANKP---LVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHKDG-FPVV 65
Query: 67 PGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCAR---------- 116
GHE GIV+ VG V+ F+ G+ V + +++ C +C +C C +
Sbjct: 66 LGHEGAGIVESVGPGVTEFQPGEKV-IPLFISQCGECRFCQSPKTNQCVKGWANESPDVM 124
Query: 117 ----SVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYXXXXXXXXXXXGITVYTPM 172
+ +T + +S Y VV++ KI T +
Sbjct: 125 SPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKIDPSAPLDTVCLLGCGVSTGFGAA 184
Query: 173 MRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVS 232
+ +PG + V GLG +G AV + G + K E + GA FV
Sbjct: 185 VNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNP 244
Query: 233 SD----LEQM--KALGKSLDFIIDTASGDHPF-DAYMSLLKVAGVYVLVGF 276
+D + Q+ K +DF ++ +A S LK GV VLVG+
Sbjct: 245 NDHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGW 295
>pdb|1F8F|A Chain A, Crystal Structure Of Benzyl Alcohol Dehydrogenase From
Acinetobacter Calcoaceticus
Length = 371
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 103/269 (38%), Gaps = 23/269 (8%)
Query: 30 RAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGD 89
R D+V + + G+C+ D+I R++ P V GHE GI++ +G NV+ +VGD
Sbjct: 27 RQPQGDEVLVKVVATGMCHTDLI-VRDQKYPVPLPAVLGHEGSGIIEAIGPNVTELQVGD 85
Query: 90 HVGVGTYVNSCRDCEYCNDGLEVHCARSV-YTFNAIDADGT---------------ITKG 133
HV V +Y C C CN G +C+ F+ D++G +
Sbjct: 86 HV-VLSY-GYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHFFAQS 143
Query: 134 GYSSYIVVHERYCYKIANDYXXXXXXXXXXXGITVYTPMMRHKMNQPGKSLGVIGLGGLG 193
+++Y + E K+ D T + P S G G +G
Sbjct: 144 SFATYALSRENNTVKVTKDVPIELLGPLGCGIQTGAGACINALKVTPASSFVTWGAGAVG 203
Query: 194 HMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLD----FII 249
A+ K G ++ + + E LGA + S + + A+ + D F +
Sbjct: 204 LSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVINSKTQDPVAAIKEITDGGVNFAL 263
Query: 250 DTASGDHPFDAYMSLLKVAGVYVLVGFPS 278
++ + L + G +VG P
Sbjct: 264 ESTGSPEILKQGVDALGILGKIAVVGAPQ 292
>pdb|4ILK|A Chain A, Crystal Structure Of Short Chain Alcohol Dehydrogenase
(rspb) From E. Coli Cft073 (efi Target Efi-506413)
Complexed With Cofactor Nadh
pdb|4ILK|B Chain B, Crystal Structure Of Short Chain Alcohol Dehydrogenase
(rspb) From E. Coli Cft073 (efi Target Efi-506413)
Complexed With Cofactor Nadh
Length = 359
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 102/252 (40%), Gaps = 22/252 (8%)
Query: 36 DVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGT 95
+V + + G+C +D R + +KYP V GHE G++ VG V +VG+ V V
Sbjct: 46 EVRVKVKLAGICGSDSHIYRGHNPFAKYPRVIGHEFFGVIDAVGEGVESARVGERVAVDP 105
Query: 96 YVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKI----AN 151
V SC C C+ G C + + AD GG+S Y VV + +KI A+
Sbjct: 106 VV-SCGHCYPCSIGKPNVC--TTLAVLGVHAD-----GGFSEYAVVPAKNAWKIPEAVAD 157
Query: 152 DYXXXXXXXXXXXGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGK-AFGLNVTVL 210
Y T+ + H ++ V G G +G V+ K + + ++
Sbjct: 158 QYAVMIEP------FTIAANVTGHGQPTENDTVLVYGAGPIGLTIVQVLKGVYNVKNVIV 211
Query: 211 STSTSKKEEALSLLGADKFVVSSDL---EQMKALGKSLDFIIDTASGDHPFDAYMSLLKV 267
+ ++ E GAD + +S E G IID A ++L
Sbjct: 212 ADRIDERLEKAKESGADWAINNSQTPLGESFAEKGIKPTLIIDAACHPSILKEAVTLASP 271
Query: 268 AGVYVLVGFPSK 279
A VL+GF S+
Sbjct: 272 AARIVLMGFSSE 283
>pdb|1JVB|A Chain A, Alcohol Dehydrogenase From The Archaeon Sulfolobus
Solfataricus
Length = 347
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 103/255 (40%), Gaps = 23/255 (9%)
Query: 36 DVSITITHCGVCYADVIWTRNKHGD--------SKYPLVPGHEIVGIVKEVGHNVSRFKV 87
V I + GVC++DV + + G+ K P+ GHEI G ++EVG V +
Sbjct: 27 QVLIKVEAAGVCHSDVHXRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVGDEVVGYSK 86
Query: 88 GDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVV-HERYC 146
GD V V + +C YC G E C + G G Y+ Y++V H +Y
Sbjct: 87 GDLVAVNPWQGEG-NCYYCRIGEEHLCDSPRWL-------GINFDGAYAEYVIVPHYKYX 138
Query: 147 YKIANDYXXXXXXXXXXXGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLN 206
YK+ GIT Y + + ++ L V GGLG AV+ KA
Sbjct: 139 YKL-RRLNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTXAVQIAKAVSGA 197
Query: 207 VTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKAL-----GKSLDFIIDTASGDHPFDAY 261
+ + EA GAD + +S + + + K +D +ID + + Y
Sbjct: 198 TIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITESKGVDAVIDLNNSEKTLSVY 257
Query: 262 MSLLKVAGVYVLVGF 276
L G YV VG
Sbjct: 258 PKALAKQGKYVXVGL 272
>pdb|3UOG|A Chain A, Crystal Structure Of Putative Alcohol Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|3UOG|B Chain B, Crystal Structure Of Putative Alcohol Dehydrogenase From
Sinorhizobium Meliloti 1021
Length = 363
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 97/228 (42%), Gaps = 18/228 (7%)
Query: 33 GSDDVSITITHCGVCYADVIWTRNKHG-DSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHV 91
G D+ + + Y D + G D +P VP + G+V+ VG +V+RF+ GD V
Sbjct: 52 GEHDIIVRTLAVSLNYRDKLVLETGXGLDLAFPFVPASDXSGVVEAVGKSVTRFRPGDRV 111
Query: 92 GVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIAN 151
+ T+ DGL R+ A + G G S Y+V+ E +
Sbjct: 112 -ISTFAPGWL------DGLRPGTGRT----PAYETLGGAHPGVLSEYVVLPEGWFVAAPK 160
Query: 152 DYXXXXXXXXXXXGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLS 211
G+T + ++ + G + V G GG+ ++ KA G V V S
Sbjct: 161 SLDAAEASTLPCAGLTAWFALVEKGHLRAGDRVVVQGTGGVALFGLQIAKATGAEVIVTS 220
Query: 212 TSTSKKEEALSLLGADKFV--VSSD-LEQMKAL--GKSLDFIIDTASG 254
+S K + A + LGAD + + D +E++ AL + D I++ A G
Sbjct: 221 SSREKLDRAFA-LGADHGINRLEEDWVERVYALTGDRGADHILEIAGG 267
>pdb|3GFB|A Chain A, L-Threonine Dehydrogenase (Tktdh) From The
Hyperthermophilic Archaeon Thermococcus Kodakaraensis
pdb|3GFB|B Chain B, L-Threonine Dehydrogenase (Tktdh) From The
Hyperthermophilic Archaeon Thermococcus Kodakaraensis
pdb|3GFB|C Chain C, L-Threonine Dehydrogenase (Tktdh) From The
Hyperthermophilic Archaeon Thermococcus Kodakaraensis
pdb|3GFB|D Chain D, L-Threonine Dehydrogenase (Tktdh) From The
Hyperthermophilic Archaeon Thermococcus Kodakaraensis
Length = 350
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 94/225 (41%), Gaps = 21/225 (9%)
Query: 33 GSDDVSITITHCGVCYADV-IWTRNKHGDS--KYPLVPGHEIVGIVKEVGHNVSRFKVGD 89
G +V I + +C D+ I+ N+ S K P + GHE+ G V EVG V +VGD
Sbjct: 28 GPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIMGHEVAGEVVEVGPGVEDLQVGD 87
Query: 90 HVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKI 149
++ V T++ C C C H ++ F +D DG ++ Y +V + +K
Sbjct: 88 YISVETHI-VCGKCYACKHN-RYHVCQNTKIF-GVDMDGV-----FAHYAIVPAKNAWKN 139
Query: 150 ANDYXXXXXXXXXXXGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTV 209
D G V T + G+S + G G LG + + KA G +
Sbjct: 140 PKDMPPEYAALQEPLGNAVDTVLAGPIA---GRSTLITGAGPLGLLGIAVAKASGAYPVI 196
Query: 210 LSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASG 254
+S + + + +GAD V + + +K F++D G
Sbjct: 197 VSEPSEFRRKLAKKVGADYVVNPFEEDPVK-------FVMDITDG 234
>pdb|4EJ6|A Chain A, Crystal Structure Of A Putative Zinc-Binding Dehydrogenase
(Target Psi-012003) From Sinorhizobium Meliloti 1021
pdb|4EJM|A Chain A, Crystal Structure Of A Putative Zinc-Binding Dehydrogenase
(Target Psi-012003) From Sinorhizobium Meliloti 1021
Bound To Nadp
Length = 370
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 105/264 (39%), Gaps = 25/264 (9%)
Query: 33 GSDDVSITITHCGVCYADVIWTRNKHGD--SKYPLVPGHEIVGIVKEVGHNVSRFKVGDH 90
G DD+ + + CG+C D HG+ S P+ GHE GIV E G V G
Sbjct: 46 GPDDLLVKVEACGICGTD---RHLLHGEFPSTPPVTLGHEFCGIVVEAGSAVRDIAPGAR 102
Query: 91 VGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIA 150
+ G SC C C G V+ R+ + A G GG++ Y++V + ++I
Sbjct: 103 I-TGDPNISCGRCPQCQAG-RVNLCRN------LRAIGIHRDGGFAEYVLVPRKQAFEIP 154
Query: 151 NDYXXXXXXXXXXXGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVL 210
++ + + G ++ ++G G +G + V+ + G +L
Sbjct: 155 LTLDPVHGAFCEPLACCLHG--VDLSGIKAGSTVAILGGGVIGLLTVQLARLAGATTVIL 212
Query: 211 STSTSKKEEALSLLGADKFVVSSDLEQMKALGKS-------LDFIIDTASGDHPFDAYMS 263
ST + K +GA V S + ++A+ +D +I+ A
Sbjct: 213 STRQATKRRLAEEVGATATVDPSAGDVVEAIAGPVGLVPGGVDVVIECAGVAETVKQSTR 272
Query: 264 LLKVAGVYVLVG-FPS--KVKFSP 284
L K G V++G P KV+ P
Sbjct: 273 LAKAGGTVVILGVLPQGEKVEIEP 296
>pdb|3FBG|A Chain A, Crystal Structure Of A Putative Arginate Lyase From
Staphylococcus Haemolyticus
pdb|3FBG|B Chain B, Crystal Structure Of A Putative Arginate Lyase From
Staphylococcus Haemolyticus
Length = 346
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 104/249 (41%), Gaps = 47/249 (18%)
Query: 61 SKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYT 120
SK P V G + +G+V+ VG+ V+ F GD V Y + D
Sbjct: 57 SKAPRVLGFDAIGVVESVGNEVTMFNQGDIV----YYSGSPD------------------ 94
Query: 121 FNAIDADGTITKGGYSSYIVVHERYCYKIANDYXXXXXXXXXXXGITVYTPMM------R 174
G + Y +++ER K + GIT Y + R
Sbjct: 95 ----------QNGSNAEYQLINERLVAKAPKNISAEQAVSLPLTGITAYETLFDVFGISR 144
Query: 175 HKMNQPGKSLGVI-GLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFV--V 231
++ GK+L +I G GG+G +A + KA+GL V + + S ++ E +GAD +
Sbjct: 145 NRNENEGKTLLIINGAGGVGSIATQIAKAYGLRV-ITTASRNETIEWTKKMGADIVLNHK 203
Query: 232 SSDLEQMKALGKSL-DFIIDTASGDHPFDAYMSLLKVAG-VYVLVGFPSKVKFS---PAS 286
S L Q K G L D++ T + D +D + L+K G + +V F + + P S
Sbjct: 204 ESLLNQFKTQGIELVDYVFCTFNTDMYYDDMIQLVKPRGHIATIVAFENDQDLNALKPKS 263
Query: 287 LNIGNAPLF 295
L+ + +F
Sbjct: 264 LSFSHEFMF 272
>pdb|1VJ0|A Chain A, Crystal Structure Of Alcohol Dehydrogenase (Tm0436) From
Thermotoga Maritima At 2.00 A Resolution
pdb|1VJ0|B Chain B, Crystal Structure Of Alcohol Dehydrogenase (Tm0436) From
Thermotoga Maritima At 2.00 A Resolution
pdb|1VJ0|C Chain C, Crystal Structure Of Alcohol Dehydrogenase (Tm0436) From
Thermotoga Maritima At 2.00 A Resolution
pdb|1VJ0|D Chain D, Crystal Structure Of Alcohol Dehydrogenase (Tm0436) From
Thermotoga Maritima At 2.00 A Resolution
Length = 380
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 108/256 (42%), Gaps = 19/256 (7%)
Query: 37 VSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVG-----HNVSRFKVGDHV 91
+ + I GVC +DV R + P++ GHE G V EV N K GD +
Sbjct: 45 ILVEILSAGVCGSDVHMFRGEDPRVPLPIILGHEGAGRVVEVNGEKRDLNGELLKPGDLI 104
Query: 92 GVGTYVNSCRDCEYCNDGLEVHCA--RSVYTFNAIDADGTITKGGYSSYIVVH-ERYCYK 148
V +C +C +C E + R VY N ++ +G YSS+IV+ E K
Sbjct: 105 -VWNRGITCGECYWCKVSKEPYLCPNRKVYGINRGCSEYPHLRGCYSSHIVLDPETDVLK 163
Query: 149 IANDYXXXXXXXXXXXGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NV 207
++ G T Y + + GK++ + G G LG V ++ G NV
Sbjct: 164 VSEKDDLDVLAMAMCSGATAYHAFDEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENV 223
Query: 208 TVLSTSTSKKEEALSLLGADKFV---VSSDLEQMKAL-----GKSLDFIIDTASGDHPFD 259
V++ S ++ + A +GAD + +S E+ KA+ G+ DFI++
Sbjct: 224 IVIAGSPNRLKLA-EEIGADLTLNRRETSVEERRKAIMDITHGRGADFILEATGDSRALL 282
Query: 260 AYMSLLKVAGVYVLVG 275
LL+ G Y + G
Sbjct: 283 EGSELLRRGGFYSVAG 298
>pdb|1TEH|A Chain A, Structure Of Human Liver Chichi Alcohol Dehydrogenase (A
Glutathione- Dependent Formaldehyde Dehydrogenase)
pdb|1TEH|B Chain B, Structure Of Human Liver Chichi Alcohol Dehydrogenase (A
Glutathione- Dependent Formaldehyde Dehydrogenase)
pdb|1M6H|A Chain A, Human Glutathione-Dependent Formaldehyde Dehydrogenase
pdb|1M6H|B Chain B, Human Glutathione-Dependent Formaldehyde Dehydrogenase
pdb|1M6W|A Chain A, Binary Complex Of Human Glutathione-Dependent Formaldehyde
Dehydrogenase And 12-Hydroxydodecanoic Acid
pdb|1M6W|B Chain B, Binary Complex Of Human Glutathione-Dependent Formaldehyde
Dehydrogenase And 12-Hydroxydodecanoic Acid
pdb|1MA0|A Chain A, Ternary Complex Of Human Glutathione-Dependent
Formaldehyde Dehydrogenase With Nad+ And Dodecanoic Acid
pdb|1MA0|B Chain B, Ternary Complex Of Human Glutathione-Dependent
Formaldehyde Dehydrogenase With Nad+ And Dodecanoic Acid
pdb|1MP0|A Chain A, Binary Complex Of Human Glutathione-Dependent Formaldehyde
Dehydrogenase With Nad(H)
pdb|1MP0|B Chain B, Binary Complex Of Human Glutathione-Dependent Formaldehyde
Dehydrogenase With Nad(H)
pdb|2FZE|A Chain A, Crystal Structure Of The Binary Complex Of Human
Glutathione-Dependent Formaldehyde Dehydrogenase With
Adp- Ribose
pdb|2FZE|B Chain B, Crystal Structure Of The Binary Complex Of Human
Glutathione-Dependent Formaldehyde Dehydrogenase With
Adp- Ribose
Length = 373
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 84/208 (40%), Gaps = 21/208 (10%)
Query: 8 KDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVP 67
K + W A P LS + +V I I VC+ D + +P++
Sbjct: 8 KAAVAWEAGKP---LSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFPVIL 64
Query: 68 GHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCAR-SVYTFNAIDA 126
GHE GIV+ VG V++ K GD V + Y+ C +C++C + C + V +
Sbjct: 65 GHEGAGIVESVGEGVTKLKAGDTV-IPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMP 123
Query: 127 DGT---ITKGG----------YSSYIVVHERYCYKIANDYXXXXXXXXXXXGI-TVYTPM 172
DGT KG +S Y VV + KI + GI T Y
Sbjct: 124 DGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKI-DPLAPLDKVCLLGCGISTGYGAA 182
Query: 173 MRHKMNQPGKSLGVIGLGGLGHMAVKFG 200
+ +PG V GLGG+G +AV G
Sbjct: 183 VNTAKLEPGSVCAVFGLGGVG-LAVIMG 209
>pdb|3QJ5|A Chain A, S-Nitrosoglutathione Reductase (Gsnor) In Complex With
N6022
pdb|3QJ5|B Chain B, S-Nitrosoglutathione Reductase (Gsnor) In Complex With
N6022
Length = 374
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 84/208 (40%), Gaps = 21/208 (10%)
Query: 8 KDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVP 67
K + W A P LS + +V I I VC+ D + +P++
Sbjct: 9 KAAVAWEAGKP---LSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFPVIL 65
Query: 68 GHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCAR-SVYTFNAIDA 126
GHE GIV+ VG V++ K GD V + Y+ C +C++C + C + V +
Sbjct: 66 GHEGAGIVESVGEGVTKLKAGDTV-IPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMP 124
Query: 127 DGT---ITKGG----------YSSYIVVHERYCYKIANDYXXXXXXXXXXXGI-TVYTPM 172
DGT KG +S Y VV + KI + GI T Y
Sbjct: 125 DGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKI-DPLAPLDKVCLLGCGISTGYGAA 183
Query: 173 MRHKMNQPGKSLGVIGLGGLGHMAVKFG 200
+ +PG V GLGG+G +AV G
Sbjct: 184 VNTAKLEPGSVCAVFGLGGVG-LAVIMG 210
>pdb|1MC5|A Chain A, Ternary Complex Of Human Glutathione-Dependent
Formaldehyde Dehydrogenase With
S-(Hydroxymethyl)glutathione And Nadh
pdb|1MC5|B Chain B, Ternary Complex Of Human Glutathione-Dependent
Formaldehyde Dehydrogenase With
S-(Hydroxymethyl)glutathione And Nadh
Length = 374
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 84/208 (40%), Gaps = 21/208 (10%)
Query: 8 KDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVP 67
K + W A P LS + +V I I VC+ D + +P++
Sbjct: 9 KAAVAWEAGKP---LSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFPVIL 65
Query: 68 GHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCAR-SVYTFNAIDA 126
GHE GIV+ VG V++ K GD V + Y+ C +C++C + C + V +
Sbjct: 66 GHEGAGIVESVGEGVTKLKAGDTV-IPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMP 124
Query: 127 DGT---ITKGG----------YSSYIVVHERYCYKIANDYXXXXXXXXXXXGI-TVYTPM 172
DGT KG +S Y VV + KI + GI T Y
Sbjct: 125 DGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKI-DPLAPLDKVCLLGCGISTGYGAA 183
Query: 173 MRHKMNQPGKSLGVIGLGGLGHMAVKFG 200
+ +PG V GLGG+G +AV G
Sbjct: 184 VNTAKLEPGSVCAVFGLGGVG-LAVIMG 210
>pdb|1PL7|A Chain A, Human Sorbitol Dehydrogenase (Apo)
pdb|1PL7|B Chain B, Human Sorbitol Dehydrogenase (Apo)
pdb|1PL7|C Chain C, Human Sorbitol Dehydrogenase (Apo)
pdb|1PL7|D Chain D, Human Sorbitol Dehydrogenase (Apo)
pdb|1PL8|A Chain A, Human SdhNAD+ COMPLEX
pdb|1PL8|B Chain B, Human SdhNAD+ COMPLEX
pdb|1PL8|C Chain C, Human SdhNAD+ COMPLEX
pdb|1PL8|D Chain D, Human SdhNAD+ COMPLEX
Length = 356
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 111/266 (41%), Gaps = 27/266 (10%)
Query: 33 GSDDVSITITHCGVCYADV-IWTRNKHGD--SKYPLVPGHEIVGIVKEVGHNVSRFKVGD 89
G ++V + + G+C +DV W + G+ K P+V GHE G V++VG +V K GD
Sbjct: 30 GPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGTVEKVGSSVKHLKPGD 89
Query: 90 HVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKI 149
V + D E+C G + + S++ DG + + + + +CYK+
Sbjct: 90 RVAIEPGAPREND-EFCKMG-RYNLSPSIFFCATPPDDGNLCR-----FYKHNAAFCYKL 142
Query: 150 ANDYXXXXXXXXXXXGITVYTPMMRHKMNQPGKSLG----VIGLGGLGHMAVKFGKAFGL 205
++ + + H + G +LG V G G +G + + KA G
Sbjct: 143 PDNVTFEEGALIEPLSVGI------HACRRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGA 196
Query: 206 NVTVLSTSTSKKEEALSLLGADKFV-VSSDLEQMKA------LGKSLDFIIDTASGDHPF 258
V++ ++ + +GAD + +S + Q A LG + I+ +
Sbjct: 197 AQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGQLGCKPEVTIECTGAEASI 256
Query: 259 DAYMSLLKVAGVYVLVGFPSKVKFSP 284
A + + G VLVG S++ P
Sbjct: 257 QAGIYATRSGGTLVLVGLGSEMTTVP 282
>pdb|3IP1|A Chain A, Structure Of Putative Alcohol Dehydrogenase (Tm_042) From
Thermotoga Maritima
pdb|3IP1|B Chain B, Structure Of Putative Alcohol Dehydrogenase (Tm_042) From
Thermotoga Maritima
pdb|3IP1|C Chain C, Structure Of Putative Alcohol Dehydrogenase (Tm_042) From
Thermotoga Maritima
pdb|3IP1|D Chain D, Structure Of Putative Alcohol Dehydrogenase (Tm_042) From
Thermotoga Maritima
Length = 404
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 84/215 (39%), Gaps = 28/215 (13%)
Query: 36 DVSITITHCGVCYADVIWTRNKH-------GDSKYPLVPGHEIVGIVKEVGHNV------ 82
++ I + CG+C +DV + G + +P+ GHE G+V E G
Sbjct: 57 EIIIKVKACGICGSDVHXAQTDEEGYILYPGLTGFPVTLGHEFSGVVVEAGPEAINRRTN 116
Query: 83 SRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVH 142
RF++G+ V + C C C +G HC ++ G G ++ Y+ V
Sbjct: 117 KRFEIGEPVCAEEXL-WCGHCRPCAEGFPNHC-------ENLNELGFNVDGAFAEYVKVD 168
Query: 143 ERYCYKIAN-------DYXXXXXXXXXXXGITVYTPMMRHKMNQPGKSLGVIGLGGLGHM 195
+Y + + D + ++R +PG ++ ++G G +G
Sbjct: 169 AKYAWSLRELEGVYEGDRLFLAGSLVEPTSVAYNAVIVRGGGIRPGDNVVILGGGPIGLA 228
Query: 196 AVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFV 230
AV K G + +LS + + LGAD +
Sbjct: 229 AVAILKHAGASKVILSEPSEVRRNLAKELGADHVI 263
>pdb|4A27|A Chain A, Crystal Structure Of Human Synaptic Vesicle Membrane
Protein Vat-1 Homolog-Like Protein
pdb|4A27|B Chain B, Crystal Structure Of Human Synaptic Vesicle Membrane
Protein Vat-1 Homolog-Like Protein
Length = 349
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 104/243 (42%), Gaps = 39/243 (16%)
Query: 36 DVSITITHCGVCYADVIWTR-NKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVG 94
++ I + CG+ + D++ + N K PLVPG E GIV+ +G +V +++GD V
Sbjct: 32 ELKIRVKACGLNFIDLMVRQGNIDNPPKTPLVPGFECSGIVEALGDSVKGYEIGDRVM-- 89
Query: 95 TYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYX 154
+VN +NA ++ + + YKI +D
Sbjct: 90 AFVN----------------------YNA-----------WAEVVCTPVEFVYKIPDDMS 116
Query: 155 XXXXXXXXXXGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTST 214
+T Y + + G S+ V GG AV + NVTV T++
Sbjct: 117 FSEAAAFPMNFVTAYVMLFEVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTAS 176
Query: 215 SKKEEALSLLGADKFVVSSD-LEQMKAL-GKSLDFIIDTASGDHPFDAYMSLLKVAGVYV 272
+ K EA+ F ++D ++++K + + +D ++D GD+ +SLLK G Y+
Sbjct: 177 TFKHEAIKDSVTHLFDRNADYVQEVKRISAEGVDIVLDCLCGDNTGKG-LSLLKPLGTYI 235
Query: 273 LVG 275
L G
Sbjct: 236 LYG 238
>pdb|1P0C|A Chain A, Crystal Structure Of The Nadp(H)-Dependent Vertebrate
Alcohol Dehydrogenase (Adh8)
pdb|1P0C|B Chain B, Crystal Structure Of The Nadp(H)-Dependent Vertebrate
Alcohol Dehydrogenase (Adh8)
pdb|1P0F|A Chain A, Crystal Structure Of The Binary Complex: Nadp(H)-Dependent
Vertebrate Alcohol Dehydrogenase (Adh8) With The
Cofactor Nadp
pdb|1P0F|B Chain B, Crystal Structure Of The Binary Complex: Nadp(H)-Dependent
Vertebrate Alcohol Dehydrogenase (Adh8) With The
Cofactor Nadp
Length = 373
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 119/299 (39%), Gaps = 30/299 (10%)
Query: 5 TASKD--CLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSK 62
TA KD C A +P LS + + +V I I G+C +D + SK
Sbjct: 3 TAGKDITCKAAVAWEPHKPLSLETITVAPPKAHEVRIKILASGICGSDSSVLKEII-PSK 61
Query: 63 YPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCAR------ 116
+P++ GHE VG+V+ +G V+ K GD V + +V C C C C +
Sbjct: 62 FPVILGHEAVGVVESIGAGVTCVKPGDKV-IPLFVPQCGSCRACKSSNSNFCEKNDMGAK 120
Query: 117 --------SVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYXXXXXXXXXXXGI-T 167
S +T + ++ Y VV + KI D G T
Sbjct: 121 TGLMADMTSRFTCRGKPIYNLMGTSTFTEYTVVADIAVAKI--DPKAPLESCLIGCGFAT 178
Query: 168 VYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTV-LSTSTSKKEEALSLLGA 226
Y + PG + V GLGG+G A+ KA G + + + T K +A+ LGA
Sbjct: 179 GYGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIE-LGA 237
Query: 227 DKFVVSSDLEQ------MKALGKSLDFIIDTASG-DHPFDAYMSLLKVAGVYVLVGFPS 278
+ + D ++ + +D+ ++ A + +A S +GV V++G S
Sbjct: 238 TECLNPKDYDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLAS 296
>pdb|1HDY|A Chain A, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
pdb|1HDY|B Chain B, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
Length = 374
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 108/300 (36%), Gaps = 34/300 (11%)
Query: 21 VLSPYSFNRRAVGSD---DVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKE 77
V P+S V +V I + G+C+ D + + + P++ GHE GIV+
Sbjct: 17 VKKPFSIEDVEVAPPKAYEVRIKMVAVGICHTD-DHVVSGNLVTPLPVILGHEAAGIVES 75
Query: 78 VGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARS-VYTFNAIDADGT------- 129
VG V+ K GD V + + C C C + +C ++ + DGT
Sbjct: 76 VGEGVTTVKPGDKV-IPLFTPQCGKCRVCKNPESNYCLKNDLGNPRGTLQDGTRRFTCRG 134
Query: 130 ------ITKGGYSSYIVVHERYCYKIANDYXXXXXXXXXXXGITVYTPMMRHKMNQPGKS 183
+ +S Y VV E KI T Y + PG +
Sbjct: 135 KPIHHFLGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPGST 194
Query: 184 LGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSD--------L 235
V GLGG+G AV KA G + K LGA + + D L
Sbjct: 195 CAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATECINPQDYKKPIQEVL 254
Query: 236 EQMKALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPSKVKFSPASLNIGNAPLF 295
++M G F + D + + + G V+VG P PAS N+ P+
Sbjct: 255 KEMTDGGVDFSFEV-IGRLDTMMASLLCCHEACGTSVIVGVP------PASQNLSINPML 307
>pdb|2FZW|A Chain A, Structure Of The Binary Complex Of The E67l Mutant Of
Human Glutathione-Dependent Formaldehyde Dehydrogenase
With Nad(H)
pdb|2FZW|B Chain B, Structure Of The Binary Complex Of The E67l Mutant Of
Human Glutathione-Dependent Formaldehyde Dehydrogenase
With Nad(H)
Length = 373
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 83/208 (39%), Gaps = 21/208 (10%)
Query: 8 KDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVP 67
K + W A P LS + +V I I VC+ D + +P++
Sbjct: 8 KAAVAWEAGKP---LSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFPVIL 64
Query: 68 GHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCAR-SVYTFNAIDA 126
GH GIV+ VG V++ K GD V + Y+ C +C++C + C + V +
Sbjct: 65 GHLGAGIVESVGEGVTKLKAGDTV-IPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMP 123
Query: 127 DGT---ITKGG----------YSSYIVVHERYCYKIANDYXXXXXXXXXXXGI-TVYTPM 172
DGT KG +S Y VV + KI + GI T Y
Sbjct: 124 DGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKI-DPLAPLDKVCLLGCGISTGYGAA 182
Query: 173 MRHKMNQPGKSLGVIGLGGLGHMAVKFG 200
+ +PG V GLGG+G +AV G
Sbjct: 183 VNTAKLEPGSVCAVFGLGGVG-LAVIMG 209
>pdb|1PL6|A Chain A, Human SdhNADHINHIBITOR COMPLEX
pdb|1PL6|B Chain B, Human SdhNADHINHIBITOR COMPLEX
pdb|1PL6|C Chain C, Human SdhNADHINHIBITOR COMPLEX
pdb|1PL6|D Chain D, Human SdhNADHINHIBITOR COMPLEX
Length = 356
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 108/266 (40%), Gaps = 27/266 (10%)
Query: 33 GSDDVSITITHCGVCYADV-IWTRNKHGD--SKYPLVPGHEIVGIVKEVGHNVSRFKVGD 89
G ++V + G+C +DV W + G+ K P V GHE G V++VG +V K GD
Sbjct: 30 GPNEVLLRXHSVGICGSDVHYWEYGRIGNFIVKKPXVLGHEASGTVEKVGSSVKHLKPGD 89
Query: 90 HVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKI 149
V + D E+C G + + S++ DG + + + + +CYK+
Sbjct: 90 RVAIEPGAPREND-EFCKXG-RYNLSPSIFFCATPPDDGNLCR-----FYKHNAAFCYKL 142
Query: 150 ANDYXXXXXXXXXXXGITVYTPMMRHKMNQPGKSLG----VIGLGGLGHMAVKFGKAFGL 205
++ + + H + G +LG V G G +G + + KA G
Sbjct: 143 PDNVTFEEGALIEPLSVGI------HACRRGGVTLGHKVLVCGAGPIGXVTLLVAKAXGA 196
Query: 206 NVTVLSTSTSKKEEALSLLGADKFV-VSSDLEQMKA------LGKSLDFIIDTASGDHPF 258
V++ ++ + +GAD + +S + Q A LG + I+ +
Sbjct: 197 AQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGQLGCKPEVTIECTGAEASI 256
Query: 259 DAYMSLLKVAGVYVLVGFPSKVKFSP 284
A + + G VLVG S+ P
Sbjct: 257 QAGIYATRSGGTLVLVGLGSEXTTVP 282
>pdb|1E3L|A Chain A, P47h Mutant Of Mouse Class Ii Alcohol Dehydrogenase
Complex With Nadh
pdb|1E3L|B Chain B, P47h Mutant Of Mouse Class Ii Alcohol Dehydrogenase
Complex With Nadh
Length = 376
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 86/228 (37%), Gaps = 36/228 (15%)
Query: 36 DVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGT 95
+V I + VC+ D+ T K + +P+V GHE GIV+ VG V+ FK GD V +
Sbjct: 35 EVRIQVIATCVCHTDINATDPKK-KALFPVVLGHECAGIVESVGPGVTNFKPGDKV-IPF 92
Query: 96 YVNSCRDCEYCNDGLEVHC--------------------------ARSVYTFNAIDADGT 129
+ C+ C+ C L C RS+Y F + +
Sbjct: 93 FAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSS--- 149
Query: 130 ITKGGYSSYIVVHERYCYKIANDYXXXXXXXXXXXGITVYTPMMRHKMNQPGKSLGVIGL 189
+S Y VV E ++ ++ + Y + PG + V GL
Sbjct: 150 -----FSQYTVVSEANLARVDDEANLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGL 204
Query: 190 GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQ 237
G +G A+ K G + + +K LGA + +L++
Sbjct: 205 GCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNPRELDK 252
>pdb|1HTB|A Chain A, Crystallization Of Human Beta3 Alcohol Dehydrogenase (10
MgML) IN 100 MM SODIUM PHOSPHATE (PH 7.5), 7.5 MM NAD+
And 1 Mm 4-Iodopyrazole At 25 C
pdb|1HTB|B Chain B, Crystallization Of Human Beta3 Alcohol Dehydrogenase (10
MgML) IN 100 MM SODIUM PHOSPHATE (PH 7.5), 7.5 MM NAD+
And 1 Mm 4-Iodopyrazole At 25 C
Length = 374
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 107/300 (35%), Gaps = 34/300 (11%)
Query: 21 VLSPYSFNRRAVGSD---DVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKE 77
V P+S V +V I + G+C D + + + P++ GHE GIV+
Sbjct: 17 VKKPFSIEDVEVAPPKAYEVRIKMVAVGICRTD-DHVVSGNLVTPLPVILGHEAAGIVES 75
Query: 78 VGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARS-VYTFNAIDADGT------- 129
VG V+ K GD V + + C C C + +C ++ + DGT
Sbjct: 76 VGEGVTTVKPGDKV-IPLFTPQCGKCRVCKNPESNYCLKNDLGNPRGTLQDGTRRFTCRG 134
Query: 130 ------ITKGGYSSYIVVHERYCYKIANDYXXXXXXXXXXXGITVYTPMMRHKMNQPGKS 183
+ +S Y VV E KI T Y + PG +
Sbjct: 135 KPIHHFLGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPGST 194
Query: 184 LGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSD--------L 235
V GLGG+G AV KA G + K LGA + + D L
Sbjct: 195 CAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATECINPQDYKKPIQEVL 254
Query: 236 EQMKALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPSKVKFSPASLNIGNAPLF 295
++M G F + D + + + G V+VG P PAS N+ P+
Sbjct: 255 KEMTDGGVDFSFEV-IGRLDTMMASLLCCHEACGTSVIVGVP------PASQNLSINPML 307
>pdb|1HDX|A Chain A, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
pdb|1HDX|B Chain B, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
pdb|3HUD|A Chain A, The Structure Of Human Beta 1 Beta 1 Alcohol
Dehydrogenase: Catalytic Effects Of Non-Active-Site
Substitutions
pdb|3HUD|B Chain B, The Structure Of Human Beta 1 Beta 1 Alcohol
Dehydrogenase: Catalytic Effects Of Non-Active-Site
Substitutions
pdb|1DEH|A Chain A, Crystallization Of Human Beta1 Alcohol Dehydrogenase (15
MgML) IN 50 MM SODIUM PHOSPHATE (PH 7.5), 2.0 MM NAD+
AND 1 Mm 4-Iodopyrazole At 25 Oc, 13% (WV) PEG 8000
pdb|1DEH|B Chain B, Crystallization Of Human Beta1 Alcohol Dehydrogenase (15
MgML) IN 50 MM SODIUM PHOSPHATE (PH 7.5), 2.0 MM NAD+
AND 1 Mm 4-Iodopyrazole At 25 Oc, 13% (WV) PEG 8000
pdb|1HSZ|A Chain A, Human Beta-1 Alcohol Dehydrogenase (Adh1b1)
pdb|1HSZ|B Chain B, Human Beta-1 Alcohol Dehydrogenase (Adh1b1)
pdb|1U3U|A Chain A, Crystal Structure Of Human Alcohol Dehydrogenase Beta-1-
Beta-1 Isoform Complexed With N-benzylformamide
Determined To 1.6 Angstrom Resolution
pdb|1U3U|B Chain B, Crystal Structure Of Human Alcohol Dehydrogenase Beta-1-
Beta-1 Isoform Complexed With N-benzylformamide
Determined To 1.6 Angstrom Resolution
pdb|1U3V|A Chain A, Crystal Structure Of Human Alcohol Dehydrogenase Beta-1-
Beta-1 Isoform Complexed With N-Heptylformamide
Determined To 1.65 Angstrom Resolution
pdb|1U3V|B Chain B, Crystal Structure Of Human Alcohol Dehydrogenase Beta-1-
Beta-1 Isoform Complexed With N-Heptylformamide
Determined To 1.65 Angstrom Resolution
Length = 374
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 107/300 (35%), Gaps = 34/300 (11%)
Query: 21 VLSPYSFNRRAVGSD---DVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKE 77
V P+S V +V I + G+C D + + + P++ GHE GIV+
Sbjct: 17 VKKPFSIEDVEVAPPKAYEVRIKMVAVGICRTD-DHVVSGNLVTPLPVILGHEAAGIVES 75
Query: 78 VGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARS-VYTFNAIDADGT------- 129
VG V+ K GD V + + C C C + +C ++ + DGT
Sbjct: 76 VGEGVTTVKPGDKV-IPLFTPQCGKCRVCKNPESNYCLKNDLGNPRGTLQDGTRRFTCRG 134
Query: 130 ------ITKGGYSSYIVVHERYCYKIANDYXXXXXXXXXXXGITVYTPMMRHKMNQPGKS 183
+ +S Y VV E KI T Y + PG +
Sbjct: 135 KPIHHFLGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPGST 194
Query: 184 LGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSD--------L 235
V GLGG+G AV KA G + K LGA + + D L
Sbjct: 195 CAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATECINPQDYKKPIQEVL 254
Query: 236 EQMKALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPSKVKFSPASLNIGNAPLF 295
++M G F + D + + + G V+VG P PAS N+ P+
Sbjct: 255 KEMTDGGVDFSFEV-IGRLDTMMASLLCCHEACGTSVIVGVP------PASQNLSINPML 307
>pdb|2EIH|A Chain A, Crystal Structure Of Nad-Dependent Alcohol Dehydrogenase
pdb|2EIH|B Chain B, Crystal Structure Of Nad-Dependent Alcohol Dehydrogenase
Length = 343
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 91/226 (40%), Gaps = 18/226 (7%)
Query: 33 GSDDVSITITHCGVCYADVIWTRNKHGDSKYPL--VPGHEIVGIVKEVGHNVSRFKVGDH 90
G +V + + + + DV W R K PL V G + G+V VG V F GD
Sbjct: 26 GPKEVRVRLKAAALNHLDV-WVRKGVASPKLPLPHVLGADGSGVVDAVGPGVEGFAPGDE 84
Query: 91 VGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIA 150
V + + SC CE C G + C R Y GT Y+ Y+V+ E
Sbjct: 85 VVINPGL-SCGRCERCLAGEDNLCPR--YQILGEHRHGT-----YAEYVVLPEANLAPKP 136
Query: 151 NDYXXXXXXXXXXXGITVYTPMMRHKMNQPGKSLGVIGLG-GLGHMAVKFGKAFGLNVTV 209
+ +T + ++ +PG + V+ G G+ A++ K FG V
Sbjct: 137 KNLSFEEAAAIPLTFLTAWQMVVDKLGVRPGDDVLVMAAGSGVSVAAIQIAKLFGARVIA 196
Query: 210 LSTSTSKKEEALSLLGADKFVVSSDLEQMKAL-----GKSLDFIID 250
+ S K A + LGAD+ V + + K + GK D ++D
Sbjct: 197 TAGSEDKLRRAKA-LGADETVNYTHPDWPKEVRRLTGGKGADKVVD 241
>pdb|1HDZ|A Chain A, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
pdb|1HDZ|B Chain B, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
Length = 374
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 107/300 (35%), Gaps = 34/300 (11%)
Query: 21 VLSPYSFNRRAVGSD---DVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKE 77
V P+S V +V I + G+C D + + + P++ GHE GIV+
Sbjct: 17 VKKPFSIEDVEVAPPKAYEVRIKMVAVGICGTD-DHVVSGNLVTPLPVILGHEAAGIVES 75
Query: 78 VGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARS-VYTFNAIDADGT------- 129
VG V+ K GD V + + C C C + +C ++ + DGT
Sbjct: 76 VGEGVTTVKPGDKV-IPLFTPQCGKCRVCKNPESNYCLKNDLGNPRGTLQDGTRRFTCRG 134
Query: 130 ------ITKGGYSSYIVVHERYCYKIANDYXXXXXXXXXXXGITVYTPMMRHKMNQPGKS 183
+ +S Y VV E KI T Y + PG +
Sbjct: 135 KPIHHFLGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPGST 194
Query: 184 LGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSD--------L 235
V GLGG+G AV KA G + K LGA + + D L
Sbjct: 195 CAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATECINPQDYKKPIQEVL 254
Query: 236 EQMKALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPSKVKFSPASLNIGNAPLF 295
++M G F + D + + + G V+VG P PAS N+ P+
Sbjct: 255 KEMTDGGVDFSFEV-IGRLDTMMASLLCCHEACGTSVIVGVP------PASQNLSINPML 307
>pdb|1E3E|A Chain A, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh
pdb|1E3E|B Chain B, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh
pdb|1E3I|A Chain A, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh And
Inhibitor
pdb|1E3I|B Chain B, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh And
Inhibitor
Length = 376
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 85/228 (37%), Gaps = 36/228 (15%)
Query: 36 DVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGT 95
+V I + VC D+ T K + +P+V GHE GIV+ VG V+ FK GD V +
Sbjct: 35 EVRIQVIATCVCPTDINATDPKK-KALFPVVLGHECAGIVESVGPGVTNFKPGDKV-IPF 92
Query: 96 YVNSCRDCEYCNDGLEVHC--------------------------ARSVYTFNAIDADGT 129
+ C+ C+ C L C RS+Y F + +
Sbjct: 93 FAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSS--- 149
Query: 130 ITKGGYSSYIVVHERYCYKIANDYXXXXXXXXXXXGITVYTPMMRHKMNQPGKSLGVIGL 189
+S Y VV E ++ ++ + Y + PG + V GL
Sbjct: 150 -----FSQYTVVSEANLARVDDEANLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGL 204
Query: 190 GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQ 237
G +G A+ K G + + +K LGA + +L++
Sbjct: 205 GCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNPRELDK 252
>pdb|1HT0|A Chain A, Human Gamma-2 Alcohol Dehydrogense
pdb|1HT0|B Chain B, Human Gamma-2 Alcohol Dehydrogense
pdb|1U3W|A Chain A, Crystal Structure Of Human Alcohol Dehydrogenase Gamma-2-
Gamma-2 Isoform Complexed With N-1-Methylheptylformamide
Determined To 1.45 Angstrom Resolution
pdb|1U3W|B Chain B, Crystal Structure Of Human Alcohol Dehydrogenase Gamma-2-
Gamma-2 Isoform Complexed With N-1-Methylheptylformamide
Determined To 1.45 Angstrom Resolution
Length = 374
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 107/297 (36%), Gaps = 34/297 (11%)
Query: 24 PYSFNRRAVG---SDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGH 80
P+S V + +V I + G+C +D + + + P++ GHE GIV+ VG
Sbjct: 20 PFSIEEVEVAPPKAHEVRIKMVAAGICRSDE-HVVSGNLVTPLPVILGHEAAGIVESVGE 78
Query: 81 NVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARS-VYTFNAIDADGT---------- 129
V+ K GD V + + C C C + +C ++ + DGT
Sbjct: 79 GVTTVKPGDKV-IPLFTPQCGKCRICKNPESNYCLKNDLGNPRGTLQDGTRRFTCSGKPI 137
Query: 130 ---ITKGGYSSYIVVHERYCYKIANDYXXXXXXXXXXXGITVYTPMMRHKMNQPGKSLGV 186
+ +S Y VV E KI T Y ++ PG + V
Sbjct: 138 HHFVGVSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTPGSTCAV 197
Query: 187 IGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSD--------LEQM 238
GLGG+G V KA G + K LGA + + D L++M
Sbjct: 198 FGLGGVGLSVVMGCKAAGAARIIAVDINKDKFAKAKELGATECINPQDYKKPIQEVLKEM 257
Query: 239 KALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPSKVKFSPASLNIGNAPLF 295
G F + D + + + G V+VG P P S N+ P+
Sbjct: 258 TDGGVDFSFEV-IGQLDTMMASLLCCHEACGTSVIVGVP------PDSQNLSINPML 307
>pdb|1HSO|A Chain A, Human Alpha Alcohol Dehydrogenase (Adh1a)
pdb|1HSO|B Chain B, Human Alpha Alcohol Dehydrogenase (Adh1a)
pdb|1U3T|A Chain A, Crystal Structure Of Human Alcohol Dehydrogenase Alpha-
Alpha Isoform Complexed With N-Cyclopentyl-N-
Cyclobutylformamide Determined To 2.5 Angstrom
Resolution
pdb|1U3T|B Chain B, Crystal Structure Of Human Alcohol Dehydrogenase Alpha-
Alpha Isoform Complexed With N-Cyclopentyl-N-
Cyclobutylformamide Determined To 2.5 Angstrom
Resolution
Length = 374
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 104/297 (35%), Gaps = 34/297 (11%)
Query: 24 PYSFNRRAVG---SDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGH 80
P+S V + +V I + G+C D + P++ GHE GIV+ VG
Sbjct: 20 PFSIEEVEVAPPKAHEVRIKMVAVGICGTDDHVVSGTM-VTPLPVILGHEAAGIVESVGE 78
Query: 81 NVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARS-VYTFNAIDADGT---------- 129
V+ K GD V + + C C C + +C ++ V DGT
Sbjct: 79 GVTTVKPGDKV-IPLAIPQCGKCRICKNPESNYCLKNDVSNPQGTLQDGTSRFTCRRKPI 137
Query: 130 ---ITKGGYSSYIVVHERYCYKIANDYXXXXXXXXXXXGITVYTPMMRHKMNQPGKSLGV 186
+ +S Y VV E KI T Y + PG + V
Sbjct: 138 HHFLGISTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPGSTCAV 197
Query: 187 IGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSD--------LEQM 238
GLGG+G A+ KA G + K LGA + + D L++M
Sbjct: 198 FGLGGVGLSAIMGCKAAGAARIIAVDINKDKFAKAKELGATECINPQDYKKPIQEVLKEM 257
Query: 239 KALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPSKVKFSPASLNIGNAPLF 295
G F + D + + + G V+VG P P S N+ P+
Sbjct: 258 TDGGVDFSFEV-IGRLDTMMASLLCCHEACGTSVIVGVP------PDSQNLSMNPML 307
>pdb|3QE3|A Chain A, Sheep Liver Sorbitol Dehydrogenase
Length = 355
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 109/267 (40%), Gaps = 29/267 (10%)
Query: 33 GSDDVSITITHCGVCYADV-IWTRNKHGD--SKYPLVPGHEIVGIVKEVGHNVSRFKVGD 89
G ++V + + G+C +DV W + GD K P+V GHE G V +VG V + GD
Sbjct: 29 GPNEVLLKMHSVGICGSDVHYWQHGRIGDFVVKKPMVLGHEASGTVVKVGSLVRHLQPGD 88
Query: 90 HVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKI 149
V + D E+C G + + +++ DG + + + + +CYK+
Sbjct: 89 RVAIQPGAPRQTD-EFCKIG-RYNLSPTIFFCATPPDDGNLCR-----FYKHNANFCYKL 141
Query: 150 ANDYXXXXXXXXXXXGITVYTPMMRHKMNQPGKSLG----VIGLGGLGHMAVKFGKAFGL 205
++ + + H + G +LG V G G +G + + KA G
Sbjct: 142 PDNVTFEEGALIEPLSVGI------HACRRAGVTLGNKVLVCGAGPIGLVNLLAAKAMGA 195
Query: 206 NVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFI--------IDTASGDHP 257
V++ ++ + +GAD F++ E + + K ++ + I+ +
Sbjct: 196 AQVVVTDLSASRLSKAKEVGAD-FILEISNESPEEIAKKVEGLLGSKPEVTIECTGVETS 254
Query: 258 FDAYMSLLKVAGVYVLVGFPSKVKFSP 284
A + G VLVG S++ P
Sbjct: 255 IQAGIYATHSGGTLVLVGLGSEMTSVP 281
>pdb|1EE2|B Chain B, The Structure Of Steroid-Active Alcohol Dehydrogenase At
1.54 A Resolution
Length = 373
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 106/297 (35%), Gaps = 35/297 (11%)
Query: 24 PYSFNRRAVG---SDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGH 80
P+S V + +V I + G+C +D + P++ GHE GIV+ +G
Sbjct: 20 PFSIEEVEVAPPKAHEVRIKMVAAGICRSDDHVVSGTL-VAPLPVIAGHEAAGIVESIGE 78
Query: 81 NVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGT----------- 129
V+ + GD V + ++ C C C C +++ DGT
Sbjct: 79 GVTTVRPGDKV-IPLFIPQCGKCSVCKHPEGNLCLKNLSMPRGTMQDGTSRFTCRGKPIH 137
Query: 130 --ITKGGYSSYIVVHERYCYKIANDYXXXXXXXXXXXGITVYTPMMRHKMNQPGKSLGVI 187
+ +S Y VV E KI T Y ++ G + V
Sbjct: 138 HFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLVGCGFSTGYGSAVKVAKVTQGSTCAVF 197
Query: 188 GLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSD--------LEQMK 239
GLGG+G + KA G + K +GA + V D L +M
Sbjct: 198 GLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMS 257
Query: 240 ALGKSLDFIIDTASGDHPFDAYMSLLKVA-GVYVLVGFPSKVKFSPASLNIGNAPLF 295
G +DF + A +S + A GV V+VG P P S N+ P+
Sbjct: 258 NGG--VDFSFEVIGRLDTMVAALSCCQEAYGVSVIVGVP------PDSQNLSMNPML 306
>pdb|1EE2|A Chain A, The Structure Of Steroid-Active Alcohol Dehydrogenase At
1.54 A Resolution
Length = 373
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 106/297 (35%), Gaps = 35/297 (11%)
Query: 24 PYSFNRRAVG---SDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGH 80
P+S V + +V I + G+C +D + P++ GHE GIV+ +G
Sbjct: 20 PFSIEEVEVAPPKAHEVRIKMVAAGICRSDDHVVSGTL-VAPLPVIAGHEAAGIVESIGE 78
Query: 81 NVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGT----------- 129
V+ + GD V + ++ C C C C +++ DGT
Sbjct: 79 GVTTVRPGDKV-IPLFIPQCGKCSVCKHPEGNLCLKNLSMPRGTMQDGTSRFTCRGKPIH 137
Query: 130 --ITKGGYSSYIVVHERYCYKIANDYXXXXXXXXXXXGITVYTPMMRHKMNQPGKSLGVI 187
+ +S Y VV E KI T Y ++ G + V
Sbjct: 138 HFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLVGCGFSTGYGSAVKVAKVTQGSTCAVF 197
Query: 188 GLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSD--------LEQMK 239
GLGG+G + KA G + K +GA + V D L +M
Sbjct: 198 GLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMS 257
Query: 240 ALGKSLDFIIDTASGDHPFDAYMSLLKVA-GVYVLVGFPSKVKFSPASLNIGNAPLF 295
G +DF + A +S + A GV V+VG P P S N+ P+
Sbjct: 258 NGG--VDFSFEVIGRLDTMVAALSCCQEAYGVSVIVGVP------PDSQNLSMNPML 306
>pdb|3JYL|A Chain A, Crystal Structures Of Pseudomonas Syringae Pv. Tomato
Dc3000 Quinone Oxidoreductase
pdb|3JYN|A Chain A, Crystal Structures Of Pseudomonas Syringae Pv. Tomato
Dc3000 Quinone Oxidoreductase Complexed With Nadph
Length = 325
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 77/207 (37%), Gaps = 41/207 (19%)
Query: 21 VLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVP---GHEIVGIVKE 77
VL F A G V + G+ + D T + G P +P G E G+V+
Sbjct: 15 VLEYVDFEPEAPGPQAVVVRNKAIGLNFID---TYYRSGLYPAPFLPSGLGAEGAGVVEA 71
Query: 78 VGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSS 137
VG V+RFKVGD V GT G + G YS
Sbjct: 72 VGDEVTRFKVGDRVAYGT--------------------------------GPL--GAYSE 97
Query: 138 YIVVHERYCYKIANDYXXXXXXXXXXXGITVYTPMMRHKMNQPGKSLGV-IGLGGLGHMA 196
V+ E K+A+ G+TV + + +PG+ + GG+G +A
Sbjct: 98 VHVLPEANLVKLADSVSFEQAAALMLKGLTVQYLLRQTYQVKPGEIILFHAAAGGVGSLA 157
Query: 197 VKFGKAFGLNVTVLSTSTSKKEEALSL 223
++ KA G + +S K A +L
Sbjct: 158 CQWAKALGAKLIGTVSSPEKAAHAKAL 184
>pdb|1YB5|A Chain A, Crystal Structure Of Human Zeta-crystallin With Bound Nadp
pdb|1YB5|B Chain B, Crystal Structure Of Human Zeta-crystallin With Bound Nadp
Length = 351
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 107/260 (41%), Gaps = 51/260 (19%)
Query: 36 DVSITITHCGVCYADVIWTRNKHGD-SKYPLVP---GHEIVGIVKEVGHNVSRFKVGDHV 91
V I + CGV + + T + G S+ PL+P G ++ G+++ VG N S FK GD V
Sbjct: 59 QVLIKVHACGV---NPVETYIRSGTYSRKPLLPYTPGSDVAGVIEAVGDNASAFKKGDRV 115
Query: 92 GVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIAN 151
+T + I GGY+ Y + + YK+
Sbjct: 116 ---------------------------FTSSTIS-------GGYAEYALAADHTVYKLPE 141
Query: 152 DYXXXXXXXXXXXGITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVL 210
T Y ++ + G+S+ V G GG+G A + +A+GL +L
Sbjct: 142 KLDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLK--IL 199
Query: 211 STSTSKKEEALSLL-GADKFVVSSDLEQMKALG-----KSLDFIIDTASGDHPFDAYMSL 264
T+ +++ + + L GA + ++ + + K +D II+ + + +SL
Sbjct: 200 GTAGTEEGQKIVLQNGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEMLANVN-LSKDLSL 258
Query: 265 LKVAGVYVLVGFPSKVKFSP 284
L G ++VG ++ +P
Sbjct: 259 LSHGGRVIVVGSRGTIEINP 278
>pdb|3TQH|A Chain A, Structure Of The Quinone Oxidoreductase From Coxiella
Burnetii
Length = 321
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 48/91 (52%), Gaps = 2/91 (2%)
Query: 165 GITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL 224
G+T + + ++ Q L G GG+GH+A++ K G TV++T++ + L L
Sbjct: 138 GLTALQALNQAEVKQGDVVLIHAGAGGVGHLAIQLAKQKG--TTVITTASKRNHAFLKAL 195
Query: 225 GADKFVVSSDLEQMKALGKSLDFIIDTASGD 255
GA++ + + + + A+ +D +ID GD
Sbjct: 196 GAEQCINYHEEDFLLAISTPVDAVIDLVGGD 226
>pdb|1QV6|A Chain A, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG MUTANT
Complexed With Nad+ And 2,4-Difluorobenzyl Alcohol
pdb|1QV6|B Chain B, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG MUTANT
Complexed With Nad+ And 2,4-Difluorobenzyl Alcohol
pdb|1QV7|A Chain A, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG MUTANT
Complexed With Nad+ And 2,3-Difluorobenzyl Alcohol
pdb|1QV7|B Chain B, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG MUTANT
Complexed With Nad+ And 2,3-Difluorobenzyl Alcohol
Length = 374
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 106/301 (35%), Gaps = 42/301 (13%)
Query: 24 PYSFNRRAVG---SDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGH 80
P+S V + +V I + G+C +D + P++ GHE GIV+ +G
Sbjct: 20 PFSIEEVEVAPPKAHEVRIKMVATGICRSDDQVVSGTL-VTPLPVIAGHEAAGIVESIGE 78
Query: 81 NVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTF-NAIDADGT---------- 129
V+ + GD V + + C C C C ++ + DGT
Sbjct: 79 GVTTVRPGDKV-IPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPI 137
Query: 130 ---ITKGGYSSYIVVHERYCYKIANDYXXXXXXXXXXXGITVYTPMMRHKMNQPGKSLGV 186
+ +S Y VV E KI T Y ++ G + V
Sbjct: 138 HHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAV 197
Query: 187 IGLGGLGHMAVKFGKAFG----LNVTVLSTSTSKKEEALSLLGADKFVVSSD-------- 234
GLGG+G + KA G + V + +K +E +GA + V D
Sbjct: 198 FGLGGVGLSVIMGCKAAGAARIIGVDINKDRFAKAKE----VGATECVNPQDYKKPIQEV 253
Query: 235 LEQMKALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPSKVKFSPASLNIGNAPL 294
L +M G F + D A + GV V+VG P P S N+ P+
Sbjct: 254 LTEMSNGGVDFSFEV-IGRLDTMVTALSCCQEAYGVSVIVGVP------PDSQNLSMNPM 306
Query: 295 F 295
Sbjct: 307 L 307
>pdb|3OQ6|A Chain A, Horse Liver Alcohol Dehydrogenase A317c Mutant Complexed
With Nad+ And 2,3,4,5,6-Pentafluorobenzyl Alcohol
pdb|3OQ6|B Chain B, Horse Liver Alcohol Dehydrogenase A317c Mutant Complexed
With Nad+ And 2,3,4,5,6-Pentafluorobenzyl Alcohol
Length = 374
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 67/297 (22%), Positives = 101/297 (34%), Gaps = 34/297 (11%)
Query: 24 PYSFNRRAVG---SDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGH 80
P+S V + +V I + G+C +D + P++ GHE GIV+ +G
Sbjct: 20 PFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTL-VTPLPVIAGHEAAGIVESIGE 78
Query: 81 NVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTF-NAIDADGT---------- 129
V+ + GD V + + C C C C ++ + DGT
Sbjct: 79 GVTTVRPGDKV-IPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPI 137
Query: 130 ---ITKGGYSSYIVVHERYCYKIANDYXXXXXXXXXXXGITVYTPMMRHKMNQPGKSLGV 186
+ +S Y VV E KI T Y ++ G + V
Sbjct: 138 HHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAV 197
Query: 187 IGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSD--------LEQM 238
GLGG+G + KA G + K +GA + V D L +M
Sbjct: 198 FGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEM 257
Query: 239 KALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPSKVKFSPASLNIGNAPLF 295
G F + D A + GV V+VG P P S N+ P+
Sbjct: 258 SNGGVDFSFEV-IGRLDTMVTALSCCQEAYGVSVIVGVP------PDSQNLSMNPML 307
>pdb|1KOL|A Chain A, Crystal Structure Of Formaldehyde Dehydrogenase
pdb|1KOL|B Chain B, Crystal Structure Of Formaldehyde Dehydrogenase
Length = 398
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 54/110 (49%), Gaps = 9/110 (8%)
Query: 37 VSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTY 96
V + + +C +D R + ++ LV GHEI G V E G +V ++GD V V
Sbjct: 36 VILKVVSTNICGSDQHMVRGRT-TAQVGLVLGHEITGEVIEKGRDVENLQIGDLVSVPFN 94
Query: 97 V--NSCRDCEYCNDG--LEVHCARSVYTFNAID-ADGTITKGGYSSYIVV 141
V CR C+ + G L V+ AR+ + +D D T GG + Y++V
Sbjct: 95 VACGRCRSCKEMHTGVCLTVNPARAGGAYGYVDMGDWT---GGQAEYVLV 141
>pdb|6ADH|A Chain A, Structure Of Triclinic Ternary Complex Of Horse Liver
Alcohol Dehydrogenase At 2.9 Angstroms Resolution
pdb|6ADH|B Chain B, Structure Of Triclinic Ternary Complex Of Horse Liver
Alcohol Dehydrogenase At 2.9 Angstroms Resolution
pdb|2OHX|A Chain A, Refined Crystal Structure Of Liver Alcohol Dehydrogenase-
Nadh Complex At 1.8 Angstroms Resolution
pdb|2OHX|B Chain B, Refined Crystal Structure Of Liver Alcohol Dehydrogenase-
Nadh Complex At 1.8 Angstroms Resolution
pdb|2OXI|A Chain A, Refined Crystal Structure Of Cu-Substituted Alcohol
Dehydrogenase At 2.1 Angstroms Resolution
pdb|2OXI|B Chain B, Refined Crystal Structure Of Cu-Substituted Alcohol
Dehydrogenase At 2.1 Angstroms Resolution
pdb|1HLD|A Chain A, Structures Of Horse Liver Alcohol Dehydrogenase Complexed
With Nad+ And Substituted Benzyl Alcohols
pdb|1HLD|B Chain B, Structures Of Horse Liver Alcohol Dehydrogenase Complexed
With Nad+ And Substituted Benzyl Alcohols
pdb|1ADB|A Chain A, Crystallographic Studies Of Isosteric Nad Analogues Bound
To Alcohol Dehydrogenase: Specificity And Substrate
Binding In Two Ternary Complexes
pdb|1ADB|B Chain B, Crystallographic Studies Of Isosteric Nad Analogues Bound
To Alcohol Dehydrogenase: Specificity And Substrate
Binding In Two Ternary Complexes
pdb|1ADC|A Chain A, Crystallographic Studies Of Isosteric Nad Analogues Bound
To Alcohol Dehydrogenase: Specificity And Substrate
Binding In Two Ternary Complexes
pdb|1ADC|B Chain B, Crystallographic Studies Of Isosteric Nad Analogues Bound
To Alcohol Dehydrogenase: Specificity And Substrate
Binding In Two Ternary Complexes
pdb|3BTO|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3s)3-Butylthiolane 1-Oxide
pdb|3BTO|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3s)3-Butylthiolane 1-Oxide
pdb|3BTO|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3s)3-Butylthiolane 1-Oxide
pdb|3BTO|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3s)3-Butylthiolane 1-Oxide
pdb|1LDY|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
Cyclohexyl Formamide (Cxf)
pdb|1LDY|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
Cyclohexyl Formamide (Cxf)
pdb|1LDY|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
Cyclohexyl Formamide (Cxf)
pdb|1LDY|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
Cyclohexyl Formamide (Cxf)
pdb|1LDE|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
N-Formyl Piperdine
pdb|1LDE|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
N-Formyl Piperdine
pdb|1LDE|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
N-Formyl Piperdine
pdb|1LDE|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
N-Formyl Piperdine
pdb|1BTO|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3r)3-Butylthiolane 1-Oxide
pdb|1BTO|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3r)3-Butylthiolane 1-Oxide
pdb|1BTO|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3r)3-Butylthiolane 1-Oxide
pdb|1BTO|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3r)3-Butylthiolane 1-Oxide
pdb|1HET|A Chain A, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing A Hydroxide Adduct To Nadh
pdb|1HET|B Chain B, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing A Hydroxide Adduct To Nadh
pdb|1HEU|A Chain A, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing Cadmium And A Hydroxide Adduct To Nadh
pdb|1HEU|B Chain B, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing Cadmium And A Hydroxide Adduct To Nadh
pdb|1HF3|A Chain A, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing Cadmium And A Hydroxide Adduct To Nadh
pdb|1HF3|B Chain B, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing Cadmium And A Hydroxide Adduct To Nadh
pdb|1MG0|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2, 3-Difluorobenzyl Alcohol
pdb|1MG0|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2, 3-Difluorobenzyl Alcohol
pdb|1MG0|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2, 3-Difluorobenzyl Alcohol
pdb|1MG0|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2, 3-Difluorobenzyl Alcohol
pdb|1N92|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
4- Iodopyrazole
pdb|1N92|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
4- Iodopyrazole
pdb|1P1R|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed With Nadh And
R- N-1-Methylhexylformamide
pdb|1P1R|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed With Nadh And
R- N-1-Methylhexylformamide
pdb|1P1R|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed With Nadh And
R- N-1-Methylhexylformamide
pdb|1P1R|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed With Nadh And
R- N-1-Methylhexylformamide
pdb|1YE3|A Chain A, Horse Liver Alcohol Dehydrogenase Apoenzyme
pdb|2JHF|A Chain A, Structural Evidence For A Ligand Coordination Switch In
Liver Alcohol Dehydrogenase
pdb|2JHF|B Chain B, Structural Evidence For A Ligand Coordination Switch In
Liver Alcohol Dehydrogenase
pdb|2JHG|A Chain A, Structural Evidence For A Ligand Coordination Switch In
Liver Alcohol Dehydrogenase
pdb|2JHG|B Chain B, Structural Evidence For A Ligand Coordination Switch In
Liver Alcohol Dehydrogenase
pdb|1ADF|A Chain A, Crystallographic Studies Of Two Alcohol
Dehydrogenase-Bound Analogs Of Thiazole-4-Carboxamide
Adenine Dinucleotide (Tad), The Active Anabolite Of The
Antitumor Agent Tiazofurin
pdb|1ADG|A Chain A, Crystallographic Studies Of Two Alcohol
Dehydrogenase-Bound Analogs Of Thiazole-4-Carboxamide
Adenine Dinucleotide (Tad), The Active Anabolite Of The
Antitumor Agent Tiazofurin
pdb|5ADH|A Chain A, Interdomain Motion In Liver Alcohol Dehydrogenase.
Structural And Energetic Analysis Of The Hinge Bending
Mode
pdb|7ADH|A Chain A, Three-Dimensional Structure Of Isonicotinimidylated Liver
Alcohol Dehydrogenase
pdb|8ADH|A Chain A, Interdomain Motion In Liver Alcohol Dehydrogenase.
Structural And Energetic Analysis Of The Hinge Bending
Mode
pdb|4DWV|A Chain A, Horse Alcohol Dehydrogenase Complexed With Nad+ And
2,3,4,5,6- Pentafluorobenzyl Alcohol
pdb|4DWV|B Chain B, Horse Alcohol Dehydrogenase Complexed With Nad+ And
2,3,4,5,6- Pentafluorobenzyl Alcohol
pdb|4DXH|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2,2,2- Trifluoroethanol
pdb|4DXH|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2,2,2- Trifluoroethanol
Length = 374
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 67/297 (22%), Positives = 101/297 (34%), Gaps = 34/297 (11%)
Query: 24 PYSFNRRAVG---SDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGH 80
P+S V + +V I + G+C +D + P++ GHE GIV+ +G
Sbjct: 20 PFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTL-VTPLPVIAGHEAAGIVESIGE 78
Query: 81 NVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTF-NAIDADGT---------- 129
V+ + GD V + + C C C C ++ + DGT
Sbjct: 79 GVTTVRPGDKV-IPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPI 137
Query: 130 ---ITKGGYSSYIVVHERYCYKIANDYXXXXXXXXXXXGITVYTPMMRHKMNQPGKSLGV 186
+ +S Y VV E KI T Y ++ G + V
Sbjct: 138 HHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAV 197
Query: 187 IGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSD--------LEQM 238
GLGG+G + KA G + K +GA + V D L +M
Sbjct: 198 FGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEM 257
Query: 239 KALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPSKVKFSPASLNIGNAPLF 295
G F + D A + GV V+VG P P S N+ P+
Sbjct: 258 SNGGVDFSFEV-IGRLDTMVTALSCCQEAYGVSVIVGVP------PDSQNLSMNPML 307
>pdb|1AXE|A Chain A, Crystal Structure Of The Active-Site Mutant Phe93->trp Of
Horse Liver Alcohol Dehydrogenase In Complex With Nad
And Inhibitor Trifluoroethanol
pdb|1AXE|B Chain B, Crystal Structure Of The Active-Site Mutant Phe93->trp Of
Horse Liver Alcohol Dehydrogenase In Complex With Nad
And Inhibitor Trifluoroethanol
Length = 374
Score = 40.8 bits (94), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 67/297 (22%), Positives = 101/297 (34%), Gaps = 34/297 (11%)
Query: 24 PYSFNRRAVG---SDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGH 80
P+S V + +V I + G+C +D + P++ GHE GIV+ +G
Sbjct: 20 PFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTL-VTPLPVIAGHEAAGIVESIGE 78
Query: 81 NVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTF-NAIDADGT---------- 129
V+ + GD V + + C C C C ++ + DGT
Sbjct: 79 GVTTVRPGDKV-IPLWTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPI 137
Query: 130 ---ITKGGYSSYIVVHERYCYKIANDYXXXXXXXXXXXGITVYTPMMRHKMNQPGKSLGV 186
+ +S Y VV E KI T Y ++ G + V
Sbjct: 138 HHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAV 197
Query: 187 IGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSD--------LEQM 238
GLGG+G + KA G + K +GA + V D L +M
Sbjct: 198 FGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEM 257
Query: 239 KALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPSKVKFSPASLNIGNAPLF 295
G F + D A + GV V+VG P P S N+ P+
Sbjct: 258 SNGGVDFSFEV-IGRLDTMVTALSCCQEAYGVSVIVGVP------PDSQNLSMNPML 307
>pdb|1AXG|A Chain A, Crystal Structure Of The Val203->ala Mutant Of Liver
Alcohol Dehydrogenase Complexed With Cofactor Nad And
Inhibitor Trifluoroethanol Solved To 2.5 Angstrom
Resolution
pdb|1AXG|B Chain B, Crystal Structure Of The Val203->ala Mutant Of Liver
Alcohol Dehydrogenase Complexed With Cofactor Nad And
Inhibitor Trifluoroethanol Solved To 2.5 Angstrom
Resolution
pdb|1AXG|C Chain C, Crystal Structure Of The Val203->ala Mutant Of Liver
Alcohol Dehydrogenase Complexed With Cofactor Nad And
Inhibitor Trifluoroethanol Solved To 2.5 Angstrom
Resolution
pdb|1AXG|D Chain D, Crystal Structure Of The Val203->ala Mutant Of Liver
Alcohol Dehydrogenase Complexed With Cofactor Nad And
Inhibitor Trifluoroethanol Solved To 2.5 Angstrom
Resolution
Length = 374
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 67/297 (22%), Positives = 100/297 (33%), Gaps = 34/297 (11%)
Query: 24 PYSFNRRAVG---SDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGH 80
P+S V + +V I + G+C +D + P++ GHE GIV+ +G
Sbjct: 20 PFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTL-VTPLPVIAGHEAAGIVESIGE 78
Query: 81 NVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTF-NAIDADGT---------- 129
V+ + GD V + + C C C C ++ + DGT
Sbjct: 79 GVTTVRPGDKV-IPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPI 137
Query: 130 ---ITKGGYSSYIVVHERYCYKIANDYXXXXXXXXXXXGITVYTPMMRHKMNQPGKSLGV 186
+ +S Y VV E KI T Y ++ G + V
Sbjct: 138 HHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAV 197
Query: 187 IGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSD--------LEQM 238
GLGG G + KA G + K +GA + V D L +M
Sbjct: 198 FGLGGAGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEM 257
Query: 239 KALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPSKVKFSPASLNIGNAPLF 295
G F + D A + GV V+VG P P S N+ P+
Sbjct: 258 SNGGVDFSFEV-IGRLDTMVTALSCCQEAYGVSVIVGVP------PDSQNLSMNPML 307
>pdb|2VN8|A Chain A, Crystal Structure Of Human Reticulon 4 Interacting Protein
1 In Complex With Nadph
pdb|2VN8|B Chain B, Crystal Structure Of Human Reticulon 4 Interacting Protein
1 In Complex With Nadph
Length = 375
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 80/202 (39%), Gaps = 43/202 (21%)
Query: 61 SKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYT 120
++PL G ++ G+V E G +V FK GD EV A +
Sbjct: 92 EEFPLTLGRDVSGVVMECGLDVKYFKPGD---------------------EVWAAVPPW- 129
Query: 121 FNAIDADGTITKGGYSSYIVVHERYCYKIANDYXXXXXXXXXXXGITVYTPMMR----HK 176
+G S ++VV +T ++ + + +
Sbjct: 130 ----------KQGTLSEFVVVSGNEVSHKPKSLTHTQAASLPYVALTAWSAINKVGGLND 179
Query: 177 MNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFV---VS 232
N GK + ++G GG+G A++ KA+ +VT + + + E + LGAD +
Sbjct: 180 KNCTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCSQDA--SELVRKLGADDVIDYKSG 237
Query: 233 SDLEQMKALGKSLDFIIDTASG 254
S EQ+K+L K DFI+D G
Sbjct: 238 SVEEQLKSL-KPFDFILDNVGG 258
>pdb|1A71|A Chain A, Ternary Complex Of An Active Site Double Mutant Of Horse
Liver Alcohol Dehydrogenase, Phe93>trp, Val203>ala With
Nad And Trifluoroethanol
pdb|1A71|B Chain B, Ternary Complex Of An Active Site Double Mutant Of Horse
Liver Alcohol Dehydrogenase, Phe93>trp, Val203>ala With
Nad And Trifluoroethanol
pdb|1A72|A Chain A, An Active-Site Double Mutant (Phe93->trp, Val203->ala) Of
Horse Liver Alcohol Dehydrogenase In Complex With The
Isosteric Nad Analog Cpad
Length = 374
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 67/297 (22%), Positives = 100/297 (33%), Gaps = 34/297 (11%)
Query: 24 PYSFNRRAVG---SDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGH 80
P+S V + +V I + G+C +D + P++ GHE GIV+ +G
Sbjct: 20 PFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTL-VTPLPVIAGHEAAGIVESIGE 78
Query: 81 NVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTF-NAIDADGT---------- 129
V+ + GD V + + C C C C ++ + DGT
Sbjct: 79 GVTTVRPGDKV-IPLWTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPI 137
Query: 130 ---ITKGGYSSYIVVHERYCYKIANDYXXXXXXXXXXXGITVYTPMMRHKMNQPGKSLGV 186
+ +S Y VV E KI T Y ++ G + V
Sbjct: 138 HHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAV 197
Query: 187 IGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSD--------LEQM 238
GLGG G + KA G + K +GA + V D L +M
Sbjct: 198 FGLGGAGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEM 257
Query: 239 KALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPSKVKFSPASLNIGNAPLF 295
G F + D A + GV V+VG P P S N+ P+
Sbjct: 258 SNGGVDFSFEV-IGRLDTMVTALSCCQEAYGVSVIVGVP------PDSQNLSMNPML 307
>pdb|1N8K|A Chain A, Horse Liver Alcohol Dehydrogenase Val292thr Mutant
Complexed To Nad+ And Pyrazole
pdb|1N8K|B Chain B, Horse Liver Alcohol Dehydrogenase Val292thr Mutant
Complexed To Nad+ And Pyrazole
Length = 374
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 100/297 (33%), Gaps = 34/297 (11%)
Query: 24 PYSFNRRAVG---SDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGH 80
P+S V + +V I + G+C +D + P++ GHE GIV+ +G
Sbjct: 20 PFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTL-VTPLPVIAGHEAAGIVESIGE 78
Query: 81 NVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTF-NAIDADGT---------- 129
V+ + GD V + + C C C C ++ + DGT
Sbjct: 79 GVTTVRPGDKV-IPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPI 137
Query: 130 ---ITKGGYSSYIVVHERYCYKIANDYXXXXXXXXXXXGITVYTPMMRHKMNQPGKSLGV 186
+ +S Y VV E KI T Y ++ G + V
Sbjct: 138 HHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAV 197
Query: 187 IGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSD--------LEQM 238
GLGG+G + KA G + K +GA + V D L +M
Sbjct: 198 FGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEM 257
Query: 239 KALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPSKVKFSPASLNIGNAPLF 295
G F + D A + GV V+ G P P S N+ P+
Sbjct: 258 SNGGVDFSFEV-IGRLDTMVTALSCCQEAYGVSVITGVP------PDSQNLSMNPML 307
>pdb|1JU9|A Chain A, Horse Liver Alcohol Dehydrogenase Val292ser Mutant
pdb|1JU9|B Chain B, Horse Liver Alcohol Dehydrogenase Val292ser Mutant
Length = 374
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 71/198 (35%), Gaps = 19/198 (9%)
Query: 24 PYSFNRRAVG---SDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGH 80
P+S V + +V I + G+C +D + P++ GHE GIV+ +G
Sbjct: 20 PFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTL-VTPLPVIAGHEAAGIVESIGE 78
Query: 81 NVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTF-NAIDADGT---------- 129
V+ + GD V + + C C C C ++ + DGT
Sbjct: 79 GVTTVRPGDKV-IPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPI 137
Query: 130 ---ITKGGYSSYIVVHERYCYKIANDYXXXXXXXXXXXGITVYTPMMRHKMNQPGKSLGV 186
+ +S Y VV E KI T Y ++ G + V
Sbjct: 138 HHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAV 197
Query: 187 IGLGGLGHMAVKFGKAFG 204
GLGG+G + KA G
Sbjct: 198 FGLGGVGLSVIMGCKAAG 215
>pdb|2VCY|A Chain A, Crystal Structure Of 2-Enoyl Thioester Reductase Of Human
Fas Ii
pdb|2VCY|B Chain B, Crystal Structure Of 2-Enoyl Thioester Reductase Of Human
Fas Ii
Length = 344
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 79/226 (34%), Gaps = 39/226 (17%)
Query: 17 DPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGD-SKYPLVPGHEIVGIV 75
DP+ V+ + AV DV + + + +D+ + +G + P V G+E V V
Sbjct: 24 DPAKVVELKNLELAAVRGSDVRVKMLAAPINPSDINMIQGNYGLLPELPAVGGNEGVAQV 83
Query: 76 KEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGY 135
VG NV+ K GD V N GL G +
Sbjct: 84 VAVGSNVTGLKPGDWV------------IPANAGL----------------------GTW 109
Query: 136 SSYIVVHERYCYKIANDYXXXXXXXXXXXGITVYTPMMRHKMNQPGKS-LGVIGLGGLGH 194
+ V E ++ +D T Y +M + QPG S + G+G
Sbjct: 110 RTEAVFSEEALIQVPSDIPLQSAATLGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQ 169
Query: 195 MAVKFGKAFGL---NVTVLSTSTSKKEEALSLLGADKFVVSSDLEQ 237
++ A GL NV K + L LGA+ + +L +
Sbjct: 170 AVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHVITEEELRR 215
>pdb|1MGO|A Chain A, Horse Liver Alcohol Dehydrogenase Phe93ala Mutant
pdb|1MGO|B Chain B, Horse Liver Alcohol Dehydrogenase Phe93ala Mutant
Length = 374
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 67/297 (22%), Positives = 100/297 (33%), Gaps = 34/297 (11%)
Query: 24 PYSFNRRAVG---SDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGH 80
P+S V + +V I + G+C +D + P++ GHE GIV+ +G
Sbjct: 20 PFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTL-VTPLPVIAGHEAAGIVESIGE 78
Query: 81 NVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTF-NAIDADGT---------- 129
V+ + GD V + C C C C ++ + DGT
Sbjct: 79 GVTTVRPGDKV-IPLATPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPI 137
Query: 130 ---ITKGGYSSYIVVHERYCYKIANDYXXXXXXXXXXXGITVYTPMMRHKMNQPGKSLGV 186
+ +S Y VV E KI T Y ++ G + V
Sbjct: 138 HHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAV 197
Query: 187 IGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSD--------LEQM 238
GLGG+G + KA G + K +GA + V D L +M
Sbjct: 198 FGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEM 257
Query: 239 KALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPSKVKFSPASLNIGNAPLF 295
G F + D A + GV V+VG P P S N+ P+
Sbjct: 258 SNGGVDFSFEV-IGRLDTMVTALSCCQEAYGVSVIVGVP------PDSQNLSMNPML 307
>pdb|1QLH|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nad Double
Mutant Of Gly 293 Ala And Pro 295 Thr
pdb|1QLJ|A Chain A, Horse Liver Alcohol Dehydrogenase Apo Enzyme Double Mutant
Of Gly 293 Ala And Pro 295 Thr
Length = 374
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 71/198 (35%), Gaps = 19/198 (9%)
Query: 24 PYSFNRRAVG---SDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGH 80
P+S V + +V I + G+C +D + P++ GHE GIV+ +G
Sbjct: 20 PFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTL-VTPLPVIAGHEAAGIVESIGE 78
Query: 81 NVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTF-NAIDADGT---------- 129
V+ + GD V + + C C C C ++ + DGT
Sbjct: 79 GVTTVRPGDKV-IPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPI 137
Query: 130 ---ITKGGYSSYIVVHERYCYKIANDYXXXXXXXXXXXGITVYTPMMRHKMNQPGKSLGV 186
+ +S Y VV E KI T Y ++ G + V
Sbjct: 138 HHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAV 197
Query: 187 IGLGGLGHMAVKFGKAFG 204
GLGG+G + KA G
Sbjct: 198 FGLGGVGLSVIMGCKAAG 215
>pdb|1ZSY|A Chain A, The Structure Of Human Mitochondrial 2-Enoyl Thioester
Reductase (Cgi- 63)
Length = 357
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 79/226 (34%), Gaps = 39/226 (17%)
Query: 17 DPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGD-SKYPLVPGHEIVGIV 75
DP+ V+ + AV DV + + + +D+ + +G + P V G+E V V
Sbjct: 37 DPAKVVELKNLELAAVRGSDVRVKMLAAPINPSDINMIQGNYGLLPELPAVGGNEGVAQV 96
Query: 76 KEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGY 135
VG NV+ K GD V N GL G +
Sbjct: 97 VAVGSNVTGLKPGDWV------------IPANAGL----------------------GTW 122
Query: 136 SSYIVVHERYCYKIANDYXXXXXXXXXXXGITVYTPMMRHKMNQPGKS-LGVIGLGGLGH 194
+ V E ++ +D T Y +M + QPG S + G+G
Sbjct: 123 RTEAVFSEEALIQVPSDIPLQSAATLGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQ 182
Query: 195 MAVKFGKAFGL---NVTVLSTSTSKKEEALSLLGADKFVVSSDLEQ 237
++ A GL NV K + L LGA+ + +L +
Sbjct: 183 AVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHVITEEELRR 228
>pdb|3GG9|A Chain A, Crystal Structure Of Putative D-3-Phosphoglycerate
Dehydrogenase Oxidoreductase From Ralstonia Solanacearum
pdb|3GG9|B Chain B, Crystal Structure Of Putative D-3-Phosphoglycerate
Dehydrogenase Oxidoreductase From Ralstonia Solanacearum
pdb|3GG9|C Chain C, Crystal Structure Of Putative D-3-Phosphoglycerate
Dehydrogenase Oxidoreductase From Ralstonia Solanacearum
pdb|3GG9|D Chain D, Crystal Structure Of Putative D-3-Phosphoglycerate
Dehydrogenase Oxidoreductase From Ralstonia Solanacearum
Length = 352
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 5/53 (9%)
Query: 181 GKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSS 233
G++LG+ G G +G + +G+AFG+NV V SK+ AD F V+
Sbjct: 160 GQTLGIFGYGKIGQLVAGYGRAFGMNVLVWGRENSKERAR-----ADGFAVAE 207
>pdb|1PED|A Chain A, Bacterial Secondary Alcohol Dehydrogenase (Apo-Form)
pdb|1PED|B Chain B, Bacterial Secondary Alcohol Dehydrogenase (Apo-Form)
pdb|1PED|C Chain C, Bacterial Secondary Alcohol Dehydrogenase (Apo-Form)
pdb|1PED|D Chain D, Bacterial Secondary Alcohol Dehydrogenase (Apo-Form)
pdb|1KEV|A Chain A, Structure Of Nadp-Dependent Alcohol Dehydrogenase
pdb|1KEV|B Chain B, Structure Of Nadp-Dependent Alcohol Dehydrogenase
pdb|1KEV|C Chain C, Structure Of Nadp-Dependent Alcohol Dehydrogenase
pdb|1KEV|D Chain D, Structure Of Nadp-Dependent Alcohol Dehydrogenase
Length = 351
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 98/274 (35%), Gaps = 38/274 (13%)
Query: 11 LGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHE 70
LGW ++ R GS D + C +D+ + ++ GHE
Sbjct: 12 LGWIEKE-----------RPVAGSYDAIVRPLAVSPCTSDIHTVFEGALGDRKNMILGHE 60
Query: 71 IVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTI 130
VG V EVG V FK GD V V R E G + H ++G +
Sbjct: 61 AVGEVVEVGSEVKDFKPGDRVIVPCTTPDWRSLE-VQAGFQQH------------SNGML 107
Query: 131 TKGGYSSYI--VVHERYCYKIANDYXXXXXXXXXXXGITVYTPMMRHKMN-------QPG 181
+S++ V E + A+ + T MM + Q G
Sbjct: 108 AGWKFSNFKDGVFGEYFHVNDADMNLAILPKDMPLENAVMITDMMTTGFHGAELADIQMG 167
Query: 182 KSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSD---LEQM 238
S+ VIG+G +G M + K G + S EA GA + + ++Q+
Sbjct: 168 SSVVVIGIGAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILNYKNGHIVDQV 227
Query: 239 KAL--GKSLDFIIDTASGDHPFDAYMSLLKVAGV 270
L GK +D +I G +S++K G+
Sbjct: 228 MKLTNGKGVDRVIMAGGGSETLSQAVSMVKPGGI 261
>pdb|2B83|A Chain A, A Single Amino Acid Substitution In The Clostridium
Beijerinckii Alcohol Dehydrogenase Is Critical For
Thermostabilization
pdb|2B83|B Chain B, A Single Amino Acid Substitution In The Clostridium
Beijerinckii Alcohol Dehydrogenase Is Critical For
Thermostabilization
pdb|2B83|C Chain C, A Single Amino Acid Substitution In The Clostridium
Beijerinckii Alcohol Dehydrogenase Is Critical For
Thermostabilization
pdb|2B83|D Chain D, A Single Amino Acid Substitution In The Clostridium
Beijerinckii Alcohol Dehydrogenase Is Critical For
Thermostabilization
Length = 351
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 97/274 (35%), Gaps = 38/274 (13%)
Query: 11 LGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHE 70
LGW ++ R GS D + C +D+ + ++ GHE
Sbjct: 12 LGWIEKE-----------RPVAGSYDAIVRPLAVSPCTSDIHTVFEGALGDRKNMILGHE 60
Query: 71 IVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTI 130
VG V EVG V FK GD V V R E G H ++G +
Sbjct: 61 AVGEVVEVGSEVKDFKPGDRVIVPCTTPDWRSLE-VQAGFPQH------------SNGML 107
Query: 131 TKGGYSSYI--VVHERYCYKIANDYXXXXXXXXXXXGITVYTPMMRHKMN-------QPG 181
+S++ V E + A+ + T MM + Q G
Sbjct: 108 AGWKFSNFKDGVFGEYFHVNDADMNLAILPKDMPLENAVMITDMMTTGFHGAELADIQMG 167
Query: 182 KSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSD---LEQM 238
S+ VIG+G +G M + K G + S EA GA + + ++Q+
Sbjct: 168 SSVVVIGIGAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILNYKNGHIVDQV 227
Query: 239 KAL--GKSLDFIIDTASGDHPFDAYMSLLKVAGV 270
L GK +D +I G +S++K G+
Sbjct: 228 MKLTNGKGVDRVIMAGGGSETLSQAVSMVKPGGI 261
>pdb|3M6I|A Chain A, L-Arabinitol 4-Dehydrogenase
pdb|3M6I|B Chain B, L-Arabinitol 4-Dehydrogenase
Length = 363
Score = 36.6 bits (83), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 51/123 (41%), Gaps = 18/123 (14%)
Query: 36 DVSITITHCGVCYADV-IWTRNKHGDSKYPLVP-----GHEIVGIVKEVGHNVSRFKVGD 89
+V++ + G+C +DV W KHG +V GHE G V V +V KVGD
Sbjct: 42 EVTVAVRSTGICGSDVHFW---KHGCIGPMIVECDHVLGHESAGEVIAVHPSVKSIKVGD 98
Query: 90 HVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHER-YCYK 148
V + V C CE C G C R +D T G V H +C+K
Sbjct: 99 RVAIEPQV-ICNACEPCLTGRYNGCER-------VDFLSTPPVPGLLRRYVNHPAVWCHK 150
Query: 149 IAN 151
I N
Sbjct: 151 IGN 153
>pdb|3FSR|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By
C. Beijerinckii Adh
pdb|3FSR|B Chain B, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By
C. Beijerinckii Adh
pdb|3FSR|C Chain C, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By
C. Beijerinckii Adh
pdb|3FSR|D Chain D, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By
C. Beijerinckii Adh
Length = 352
Score = 34.3 bits (77), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 90/256 (35%), Gaps = 25/256 (9%)
Query: 28 NRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKV 87
+ A G D + C +D+ ++ ++ GHE VG V EVG V FK
Sbjct: 18 EKPAPGPFDAIVRPLAVAPCTSDIHTVFEGAIGERHNMILGHEAVGEVVEVGSEVKDFKP 77
Query: 88 GDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCY 147
GD V V R E G H + + + G + + V++
Sbjct: 78 GDRVVVPAITPDWRTSE-VQRGYHQHSGGMLAGWKF----SNVKDGVFGEFFHVND---- 128
Query: 148 KIANDYXXXXXXXXXXXGITVYTP-MMRHKMN-------QPGKSLGVIGLGGLGHMAVKF 199
D V P MM + Q G S+ VIG+G +G M +
Sbjct: 129 ---ADMNLAHLPKEIPLEAAVMIPDMMTTGFHGAELADIQMGSSVVVIGIGAVGLMGIAG 185
Query: 200 GKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSD---LEQMKAL--GKSLDFIIDTASG 254
K G + S EA GA + + ++Q+ L GK +D +I G
Sbjct: 186 AKLRGAGRIIGVGSRPICVEAAKFYGATDILNYKNGHIVDQVMKLTNGKGVDRVIMAGGG 245
Query: 255 DHPFDAYMSLLKVAGV 270
+S++K G+
Sbjct: 246 SETLSQAVSMVKPGGI 261
>pdb|1JQB|A Chain A, Alcohol Dehydrogenase From Clostridium Beijerinckii:
Crystal Structure Of Mutant With Enhanced Thermal
Stability
pdb|1JQB|B Chain B, Alcohol Dehydrogenase From Clostridium Beijerinckii:
Crystal Structure Of Mutant With Enhanced Thermal
Stability
pdb|1JQB|C Chain C, Alcohol Dehydrogenase From Clostridium Beijerinckii:
Crystal Structure Of Mutant With Enhanced Thermal
Stability
pdb|1JQB|D Chain D, Alcohol Dehydrogenase From Clostridium Beijerinckii:
Crystal Structure Of Mutant With Enhanced Thermal
Stability
Length = 351
Score = 33.5 bits (75), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 96/274 (35%), Gaps = 38/274 (13%)
Query: 11 LGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHE 70
LGW ++ R GS D + C +D+ + ++ GHE
Sbjct: 12 LGWIEKE-----------RPVAGSYDAIVRPLAVSPCTSDIHTVFEGALGDRKNMILGHE 60
Query: 71 IVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTI 130
VG V EVG V FK GD V V R E G + H ++G +
Sbjct: 61 AVGEVVEVGSEVKDFKPGDRVIVPCTTPDWRSLE-VQAGFQQH------------SNGML 107
Query: 131 TKGGYSSYI--VVHERYCYKIANDYXXXXXXXXXXXGITVYTPMMRHKMN-------QPG 181
+S++ V E + A+ + T MM + + G
Sbjct: 108 AGWKFSNFKDGVFGEYFHVNDADMNLAILPKDMPLENAVMITDMMTTGFHGAELADIEMG 167
Query: 182 KSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSD---LEQM 238
S+ VIG+G +G M + K G + S EA GA + + +Q+
Sbjct: 168 SSVVVIGIGAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILNYKNGHIEDQV 227
Query: 239 KAL--GKSLDFIIDTASGDHPFDAYMSLLKVAGV 270
L GK +D +I G + ++K G+
Sbjct: 228 MKLTNGKGVDRVIMAGGGSETLSQAVKMVKPGGI 261
>pdb|3FPL|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-295 Of C. Beijerinckii
Adh By T. Brockii Adh
Length = 351
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 40/104 (38%), Gaps = 14/104 (13%)
Query: 11 LGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADV-IWTRNKHGDSKYPLVPGH 69
LGW ++ R GS D + C +D+ GD K ++ GH
Sbjct: 12 LGWIEKE-----------RPVAGSYDAIVRPLAVSPCTSDIHTVFEGALGDRKN-MILGH 59
Query: 70 EIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVH 113
E VG V EVG V FK GD V V R E G + H
Sbjct: 60 EAVGEVVEVGSEVKDFKPGDRVIVPCTTPDWRSLE-VQAGFQQH 102
>pdb|1YKF|A Chain A, Nadp-Dependent Alcohol Dehydrogenase From Thermoanaerobium
Brockii
pdb|1YKF|B Chain B, Nadp-Dependent Alcohol Dehydrogenase From Thermoanaerobium
Brockii
pdb|1YKF|C Chain C, Nadp-Dependent Alcohol Dehydrogenase From Thermoanaerobium
Brockii
pdb|1YKF|D Chain D, Nadp-Dependent Alcohol Dehydrogenase From Thermoanaerobium
Brockii
pdb|1BXZ|A Chain A, Crystal Structure Of A Thermophilic Alcohol Dehydrogenase
Substrate Complex From Thermoanaerobacter Brockii
pdb|1BXZ|B Chain B, Crystal Structure Of A Thermophilic Alcohol Dehydrogenase
Substrate Complex From Thermoanaerobacter Brockii
pdb|1BXZ|C Chain C, Crystal Structure Of A Thermophilic Alcohol Dehydrogenase
Substrate Complex From Thermoanaerobacter Brockii
pdb|1BXZ|D Chain D, Crystal Structure Of A Thermophilic Alcohol Dehydrogenase
Substrate Complex From Thermoanaerobacter Brockii
Length = 352
Score = 33.1 bits (74), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 31/77 (40%)
Query: 28 NRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKV 87
+ A G D + C +D+ ++ ++ GHE VG V EVG V FK
Sbjct: 18 EKPAPGPFDAIVRPLAVAPCTSDIHTVFEGAIGERHNMILGHEAVGEVVEVGSEVKDFKP 77
Query: 88 GDHVGVGTYVNSCRDCE 104
GD V V R E
Sbjct: 78 GDRVVVPAITPDWRTSE 94
>pdb|2NVB|A Chain A, Contribution Of Pro275 To The Thermostability Of The
Alcohol Dehydrogenases (Adhs)
pdb|2NVB|B Chain B, Contribution Of Pro275 To The Thermostability Of The
Alcohol Dehydrogenases (Adhs)
pdb|2NVB|C Chain C, Contribution Of Pro275 To The Thermostability Of The
Alcohol Dehydrogenases (Adhs)
pdb|2NVB|D Chain D, Contribution Of Pro275 To The Thermostability Of The
Alcohol Dehydrogenases (Adhs)
Length = 352
Score = 33.1 bits (74), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 31/77 (40%)
Query: 28 NRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKV 87
+ A G D + C +D+ ++ ++ GHE VG V EVG V FK
Sbjct: 18 EKPAPGPFDAIVRPLAVAPCTSDIHTVFEGAIGERHNMILGHEAVGEVVEVGSEVKDFKP 77
Query: 88 GDHVGVGTYVNSCRDCE 104
GD V V R E
Sbjct: 78 GDRVVVPAITPDWRTSE 94
>pdb|4DUP|A Chain A, Crystal Structure Of A Quinone Oxidoreductase From
Rhizobium Etli Cfn 42
pdb|4DUP|B Chain B, Crystal Structure Of A Quinone Oxidoreductase From
Rhizobium Etli Cfn 42
Length = 353
Score = 32.7 bits (73), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 96/264 (36%), Gaps = 50/264 (18%)
Query: 33 GSDDVSITITHCGVCYADVIWTRNKHGDSK--YPLVPGHEIVGIVKEVGHNVSRFKVGDH 90
G +V + GV D+ + + K P++ G E+ G + VG VS + VGD
Sbjct: 54 GEGEVLVRAEAIGVNRPDIAQRQGSYPPPKDASPIL-GLELSGEIVGVGPGVSGYAVGDK 112
Query: 91 VGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIA 150
V C N G Y+ Y ++
Sbjct: 113 V-----------CGLANGG------------------------AYAEYCLLPAGQILPFP 137
Query: 151 NDYXXXXXXXXXXXGITVYTPMMRHKMNQPGKSLGVIG-LGGLGHMAVKFGKAFGLNVTV 209
Y TV+ + + G+S+ + G G+G A++ +AFG V
Sbjct: 138 KGYDAVKAAALPETFFTVWANLFQXAGLTEGESVLIHGGTSGIGTTAIQLARAFGAEVYA 197
Query: 210 LSTSTSKKEEALSLLGADKFV--VSSDLEQ-MKA-LGKSLDFIIDTASGDHPFDAYMSLL 265
+ ST K EA LGA + + S D +KA G+ +D I+D + F+ ++ L
Sbjct: 198 TAGSTGKC-EACERLGAKRGINYRSEDFAAVIKAETGQGVDIILDXIGAAY-FERNIASL 255
Query: 266 KVAGVYVLVGF-----PSKVKFSP 284
G ++ F KV SP
Sbjct: 256 AKDGCLSIIAFLGGAVAEKVNLSP 279
>pdb|3FTN|A Chain A, Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDROGENASE
BY EXCHANGE Of The Cofactor Binding Domain Res 153-295
Of T. Brockii Adh By C. Beijerinckii Adh
pdb|3FTN|B Chain B, Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDROGENASE
BY EXCHANGE Of The Cofactor Binding Domain Res 153-295
Of T. Brockii Adh By C. Beijerinckii Adh
pdb|3FTN|C Chain C, Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDROGENASE
BY EXCHANGE Of The Cofactor Binding Domain Res 153-295
Of T. Brockii Adh By C. Beijerinckii Adh
pdb|3FTN|D Chain D, Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDROGENASE
BY EXCHANGE Of The Cofactor Binding Domain Res 153-295
Of T. Brockii Adh By C. Beijerinckii Adh
Length = 352
Score = 32.7 bits (73), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 31/77 (40%)
Query: 28 NRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKV 87
+ A G D + C +D+ ++ ++ GHE VG V EVG V FK
Sbjct: 18 EKPAPGPFDAIVRPLAVAPCTSDIHTVFEGAIGERHNMILGHEAVGEVVEVGSEVKDFKP 77
Query: 88 GDHVGVGTYVNSCRDCE 104
GD V V R E
Sbjct: 78 GDRVVVPAITPDWRTSE 94
>pdb|2DPH|A Chain A, Crystal Structure Of Formaldehyde Dismutase
pdb|2DPH|B Chain B, Crystal Structure Of Formaldehyde Dismutase
Length = 398
Score = 32.3 bits (72), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 38/80 (47%), Gaps = 5/80 (6%)
Query: 66 VPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNA-I 124
V GHEI G V E G +V +GD V V V +C C C + C ++ +A +
Sbjct: 63 VLGHEITGEVVEKGSDVELMDIGDLVSVPFNV-ACGRCRNCKEARSDVCENNLVNPDADL 121
Query: 125 DADGTITK---GGYSSYIVV 141
A G K GG + Y++V
Sbjct: 122 GAFGFDLKGWSGGQAEYVLV 141
>pdb|1HKU|A Chain A, CtbpBARS: A DUAL-Function Protein Involved In
Transcription Corepression And Golgi Membrane Fission
Length = 358
Score = 32.3 bits (72), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 18/27 (66%)
Query: 181 GKSLGVIGLGGLGHMAVKFGKAFGLNV 207
G++LG+IGLG +G KAFG NV
Sbjct: 171 GETLGIIGLGRVGQAVALRAKAFGFNV 197
>pdb|1HL3|A Chain A, CtbpBARS IN TERNARY COMPLEX WITH NAD(H) AND PIDLSKK
PEPTIDE
pdb|2HU2|A Chain A, CtbpBARS IN TERNARY COMPLEX WITH NAD(H) AND RRTGAPPAL
Peptide
Length = 358
Score = 32.3 bits (72), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 18/27 (66%)
Query: 181 GKSLGVIGLGGLGHMAVKFGKAFGLNV 207
G++LG+IGLG +G KAFG NV
Sbjct: 171 GETLGIIGLGRVGQAVALRAKAFGFNV 197
>pdb|1MX3|A Chain A, Crystal Structure Of Ctbp Dehydrogenase Core Holo Form
Length = 347
Score = 32.3 bits (72), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 18/27 (66%)
Query: 181 GKSLGVIGLGGLGHMAVKFGKAFGLNV 207
G++LG+IGLG +G KAFG NV
Sbjct: 168 GETLGIIGLGRVGQAVALRAKAFGFNV 194
>pdb|3FPC|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-294 Of T. Brockii Adh By
E. Histolytica Adh
pdb|3FPC|B Chain B, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-294 Of T. Brockii Adh By
E. Histolytica Adh
pdb|3FPC|C Chain C, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-294 Of T. Brockii Adh By
E. Histolytica Adh
pdb|3FPC|D Chain D, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-294 Of T. Brockii Adh By
E. Histolytica Adh
Length = 352
Score = 32.0 bits (71), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 31/77 (40%)
Query: 28 NRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKV 87
+ A G D + C +D+ ++ ++ GHE VG V EVG V FK
Sbjct: 18 EKPAPGPFDAIVRPLAVAPCTSDIHTVFEGAIGERHNMILGHEAVGEVVEVGSEVKDFKP 77
Query: 88 GDHVGVGTYVNSCRDCE 104
GD V V R E
Sbjct: 78 GDRVVVPAITPDWRTSE 94
>pdb|4A0S|A Chain A, Structure Of The 2-Octenoyl-Coa Carboxylase Reductase Cinf
In Complex With Nadp And 2-Octenoyl-Coa
pdb|4A0S|B Chain B, Structure Of The 2-Octenoyl-Coa Carboxylase Reductase Cinf
In Complex With Nadp And 2-Octenoyl-Coa
pdb|4A0S|C Chain C, Structure Of The 2-Octenoyl-Coa Carboxylase Reductase Cinf
In Complex With Nadp And 2-Octenoyl-Coa
pdb|4A0S|D Chain D, Structure Of The 2-Octenoyl-Coa Carboxylase Reductase Cinf
In Complex With Nadp And 2-Octenoyl-Coa
pdb|4A10|A Chain A, Apo-Structure Of 2-Octenoyl-Coa Carboxylase Reductase Cinf
From Streptomyces Sp.
pdb|4A10|B Chain B, Apo-Structure Of 2-Octenoyl-Coa Carboxylase Reductase Cinf
From Streptomyces Sp.
pdb|4A10|C Chain C, Apo-Structure Of 2-Octenoyl-Coa Carboxylase Reductase Cinf
From Streptomyces Sp.
pdb|4A10|D Chain D, Apo-Structure Of 2-Octenoyl-Coa Carboxylase Reductase Cinf
From Streptomyces Sp
Length = 447
Score = 31.6 bits (70), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 78/205 (38%), Gaps = 22/205 (10%)
Query: 66 VPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAID 125
V G + G+V G V R+K GDHV V ++ DG+ + + + F
Sbjct: 112 VLGSDCSGVVVRTGIGVRRWKPGDHVIVHPAHVDEQEPATHGDGM-LGTEQRAWGFET-- 168
Query: 126 ADGTITKGGYSSYIVVHERYCYKIANDYXXXXXXXXXXXGITVYTPMM--RHKMNQPGKS 183
GG + Y VV T Y ++ R + G
Sbjct: 169 -----NFGGLAEYGVVRASQLLPKPAHLTWEEAAVSPLCAGTAYRMLVSDRGAQMKQGDI 223
Query: 184 LGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFV----------VS 232
+ + G GGLG A++F K G + V S+++KE A+ LG D + ++
Sbjct: 224 VLIWGASGGLGSYAIQFVKNGG-GIPVAVVSSAQKEAAVRALGCDLVINRAELGITDDIA 282
Query: 233 SDLEQMKALGKSLDFIIDTASGDHP 257
D ++ G+ L ++ +G P
Sbjct: 283 DDPRRVVETGRKLAKLVVEKAGREP 307
>pdb|2OUI|A Chain A, D275p Mutant Of Alcohol Dehydrogenase From Protozoa
Entamoeba Histolytica
pdb|2OUI|B Chain B, D275p Mutant Of Alcohol Dehydrogenase From Protozoa
Entamoeba Histolytica
pdb|2OUI|C Chain C, D275p Mutant Of Alcohol Dehydrogenase From Protozoa
Entamoeba Histolytica
pdb|2OUI|D Chain D, D275p Mutant Of Alcohol Dehydrogenase From Protozoa
Entamoeba Histolytica
Length = 360
Score = 30.4 bits (67), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 20/30 (66%)
Query: 62 KYPLVPGHEIVGIVKEVGHNVSRFKVGDHV 91
++ ++ GHE VG + +VG V R KVGD V
Sbjct: 52 RHDMILGHEAVGQIVKVGSLVKRLKVGDKV 81
>pdb|1Y9A|A Chain A, Alcohol Dehydrogenase From Entamoeba Histolotica In
Complex With Cacodylate
pdb|1Y9A|C Chain C, Alcohol Dehydrogenase From Entamoeba Histolotica In
Complex With Cacodylate
Length = 360
Score = 30.4 bits (67), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 20/30 (66%)
Query: 62 KYPLVPGHEIVGIVKEVGHNVSRFKVGDHV 91
++ ++ GHE VG + +VG V R KVGD V
Sbjct: 52 RHDMILGHEAVGQIVKVGSLVKRLKVGDKV 81
>pdb|3QWA|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
pdb|3QWA|B Chain B, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
pdb|3QWB|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
pdb|3QWB|B Chain B, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
pdb|3QWB|C Chain C, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
pdb|3QWB|D Chain D, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
Length = 334
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Query: 31 AVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDH 90
++ +++ I + GV Y + + + + K P V G E G V G V+ F+VGD
Sbjct: 32 SISEEELLIKNKYTGVNYIESYFRKGIYPCEK-PYVLGREASGTVVAKGKGVTNFEVGDQ 90
Query: 91 VGVGTYVNSCRDCEYCN 107
V Y+++ +Y
Sbjct: 91 VA---YISNSTFAQYSK 104
>pdb|3GMS|A Chain A, Crystal Structure Of Putative Nadph:quinone Reductase
From Bacillus Thuringiensis
Length = 340
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 23/37 (62%), Gaps = 4/37 (10%)
Query: 64 PLVPGHEIVGIVKEVGHNVSRFKVGDHV----GVGTY 96
P +PG+E VGIV+ VG VSR +G V G GT+
Sbjct: 63 PNIPGYEGVGIVENVGAFVSRELIGKRVLPLRGEGTW 99
>pdb|4E4T|A Chain A, Crystal Structure Of Phosphoribosylaminoimidazole
Carboxylase, Atpase Subunit From Burkholderia Ambifaria
pdb|4E4T|B Chain B, Crystal Structure Of Phosphoribosylaminoimidazole
Carboxylase, Atpase Subunit From Burkholderia Ambifaria
Length = 419
Score = 30.0 bits (66), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 36/87 (41%), Gaps = 17/87 (19%)
Query: 180 PGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKK---------------EEALSLL 224
PG LG++G G LG M ++ G V VL + E AL+ L
Sbjct: 34 PGAWLGMVGGGQLGRMFCFAAQSMGYRVAVLDPDPASPAGAVADRHLRAAYDDEAALAEL 93
Query: 225 GADKFVVSSDLEQMKALGKSLDFIIDT 251
VS++ E + A SLDF+ T
Sbjct: 94 AGLCEAVSTEFENVPA--ASLDFLART 118
>pdb|4IZO|A Chain A, Crystal Structure Of Kinase Phosphoribosylaminoimidazole
Carboxylase, Atpase Subunit From Burkholderia
Thailandensis
Length = 419
Score = 30.0 bits (66), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 36/87 (41%), Gaps = 17/87 (19%)
Query: 180 PGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKK---------------EEALSLL 224
PG LG++G G LG M +A G V VL + E AL+ L
Sbjct: 34 PGAWLGMVGGGQLGRMFCFAAQAMGYRVAVLDPDPTSPAGAVADKHLRAAYDDEAALAEL 93
Query: 225 GADKFVVSSDLEQMKALGKSLDFIIDT 251
VS++ E + A SLDF+ +
Sbjct: 94 AQLCDAVSTEFENVPA--ASLDFLAQS 118
>pdb|3GA0|A Chain A, Ctbp1BARS GLY172->glu Mutant Structure: Impairing Nad(H)
Binding And Dimerization
Length = 358
Score = 29.6 bits (65), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 17/27 (62%)
Query: 181 GKSLGVIGLGGLGHMAVKFGKAFGLNV 207
G++LG+IGL +G KAFG NV
Sbjct: 171 GETLGIIGLERVGQAVALRAKAFGFNV 197
>pdb|1YGY|A Chain A, Crystal Structure Of D-3-Phosphoglycerate Dehydrogenase
From Mycobacterium Tuberculosis
pdb|1YGY|B Chain B, Crystal Structure Of D-3-Phosphoglycerate Dehydrogenase
From Mycobacterium Tuberculosis
pdb|3DC2|A Chain A, Crystal Structure Of Serine Bound D-3-Phosphoglycerate
Dehydrogenase From Mycobacterium Tuberculosis
pdb|3DC2|B Chain B, Crystal Structure Of Serine Bound D-3-Phosphoglycerate
Dehydrogenase From Mycobacterium Tuberculosis
Length = 529
Score = 29.3 bits (64), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Query: 181 GKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEA---LSLLGADKFVVSSD 234
GK++GV+GLG +G + + AFG V S A + LL D + +D
Sbjct: 142 GKTVGVVGLGRIGQLVAQRIAAFGAYVVAYDPYVSPARAAQLGIELLSLDDLLARAD 198
>pdb|3DDN|A Chain A, Crystal Structure Of Hydroxypyruvic Acid Phosphate Bound
D-3- Phosphoglycerate Dehydrogenase In Mycobacterium
Tuberculosis
pdb|3DDN|B Chain B, Crystal Structure Of Hydroxypyruvic Acid Phosphate Bound
D-3- Phosphoglycerate Dehydrogenase In Mycobacterium
Tuberculosis
Length = 528
Score = 29.3 bits (64), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Query: 181 GKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEA---LSLLGADKFVVSSD 234
GK++GV+GLG +G + + AFG V S A + LL D + +D
Sbjct: 141 GKTVGVVGLGRIGQLVAQRIAAFGAYVVAYDPYVSPARAAQLGIELLSLDDLLARAD 197
>pdb|4DLP|A Chain A, Crystal Structure Of Methionyl-Trna Synthetase Metrs From
Brucella Melitensis Bound To Selenomethionine
pdb|4DLP|B Chain B, Crystal Structure Of Methionyl-Trna Synthetase Metrs From
Brucella Melitensis Bound To Selenomethionine
pdb|4DLP|C Chain C, Crystal Structure Of Methionyl-Trna Synthetase Metrs From
Brucella Melitensis Bound To Selenomethionine
Length = 536
Score = 29.3 bits (64), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Query: 97 VNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCY 147
+NS D +Y E H S + A+ A+G I KGGY+ + V + Y
Sbjct: 107 LNSSND-DYIRTSEERHYKASQAIWQAMVANGDIYKGGYAGWYSVRDEAYY 156
>pdb|4DGS|A Chain A, The Crystals Structure Of Dehydrogenase From Rhizobium
Meliloti
Length = 340
Score = 28.9 bits (63), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 20/34 (58%)
Query: 181 GKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTST 214
GK +GV+GLG +G +AFG +V + ST
Sbjct: 171 GKRIGVLGLGQIGRALASRAEAFGXSVRYWNRST 204
>pdb|2CDB|A Chain A, Sulfolobus Solfataricus Glucose Dehydrogenase 1 In Complex
With Nadp And Glucose
pdb|2CDB|B Chain B, Sulfolobus Solfataricus Glucose Dehydrogenase 1 In Complex
With Nadp And Glucose
pdb|2CDB|C Chain C, Sulfolobus Solfataricus Glucose Dehydrogenase 1 In Complex
With Nadp And Glucose
pdb|2CDB|D Chain D, Sulfolobus Solfataricus Glucose Dehydrogenase 1 In Complex
With Nadp And Glucose
pdb|2CDC|A Chain A, Sulfolobus Solfataricus Glucose Dehydrogenase 1 In Complex
With Nadp And Xylose
pdb|2CDC|B Chain B, Sulfolobus Solfataricus Glucose Dehydrogenase 1 In Complex
With Nadp And Xylose
pdb|2CDC|C Chain C, Sulfolobus Solfataricus Glucose Dehydrogenase 1 In Complex
With Nadp And Xylose
pdb|2CDC|D Chain D, Sulfolobus Solfataricus Glucose Dehydrogenase 1 In Complex
With Nadp And Xylose
Length = 366
Score = 28.1 bits (61), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 38/89 (42%), Gaps = 23/89 (25%)
Query: 37 VSITITHCGVCYADVIWTRNKHGDSKYP-----LVPGHEIVGIVKEVGHNVSRFKVGDHV 91
+ I + G+C AD K S P LV GHE +G+V+E H S+ GD V
Sbjct: 29 IKIRTIYNGICGADREIVNGKLTLSTLPKGKDFLVLGHEAIGVVEESYHGFSQ---GDLV 85
Query: 92 ------GVGTYVNSCRDC-----EYCNDG 109
G G CR+C ++C G
Sbjct: 86 MPVNRRGCGI----CRNCLVGRPDFCETG 110
>pdb|1QOR|A Chain A, Crystal Structure Of Escherichia Coli Quinone
Oxidoreductase Complexed With Nadph
pdb|1QOR|B Chain B, Crystal Structure Of Escherichia Coli Quinone
Oxidoreductase Complexed With Nadph
Length = 327
Score = 28.1 bits (61), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 26/71 (36%)
Query: 21 VLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGH 80
VL F +++ + G+ + D + P G E GIV +VG
Sbjct: 15 VLQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLYPPPSLPSGLGTEAAGIVSKVGS 74
Query: 81 NVSRFKVGDHV 91
V K GD V
Sbjct: 75 GVKHIKAGDRV 85
>pdb|1WLY|A Chain A, Crystal Structure Of 2-haloacrylate Reductase
Length = 333
Score = 28.1 bits (61), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 18/28 (64%)
Query: 64 PLVPGHEIVGIVKEVGHNVSRFKVGDHV 91
P+V G E +V+EVG V+ F VG+ V
Sbjct: 61 PIVVGFEAAAVVEEVGPGVTDFTVGERV 88
>pdb|2X58|A Chain A, The Crystal Structure Of Mfe1 Liganded With Coa
pdb|2X58|B Chain B, The Crystal Structure Of Mfe1 Liganded With Coa
Length = 727
Score = 27.7 bits (60), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 35/60 (58%), Gaps = 9/60 (15%)
Query: 179 QPGKSLGVIGLGGLGH-MAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQ 237
QP S+GV+GLG +G +A+ F + + ++V++ + K+ L A K +++ LE+
Sbjct: 299 QPVSSVGVLGLGTMGRGIAISFAR---VGISVVAVESDPKQ-----LDAAKKIITFTLEK 350
>pdb|3HG7|A Chain A, Crystal Structure Of D-Isomer Specific 2-Hydroxyacid
Dehydrogenase Family Protein From Aeromonas Salmonicida
Subsp. Salmonicida A449
Length = 324
Score = 27.7 bits (60), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Query: 181 GKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKK---EEALSLLGADKFVVSSDL 235
G++L ++G G +G GK FG+ V +S S ++ ++ L +K + +D+
Sbjct: 140 GRTLLILGTGSIGQHIAHTGKHFGMKVLGVSRSGRERAGFDQVYQLPALNKMLAQADV 197
>pdb|3ZWB|A Chain A, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) Complexed With
2trans-hexenoyl-coa
pdb|3ZWB|B Chain B, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) Complexed With
2trans-hexenoyl-coa
Length = 742
Score = 27.7 bits (60), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 35/60 (58%), Gaps = 9/60 (15%)
Query: 179 QPGKSLGVIGLGGLGH-MAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQ 237
QP S+GV+GLG +G +A+ F + + ++V++ + K+ L A K +++ LE+
Sbjct: 314 QPVSSVGVLGLGTMGRGIAISFAR---VGISVVAVESDPKQ-----LDAAKKIITFTLEK 365
>pdb|3ZW8|A Chain A, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) In Apo Form
pdb|3ZW8|B Chain B, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) In Apo Form
pdb|3ZW9|A Chain A, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) Complexed With
(2s,3s)-3-hydroxy-2- Methylbutanoyl-coa
pdb|3ZW9|B Chain B, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) Complexed With
(2s,3s)-3-hydroxy-2- Methylbutanoyl-coa
pdb|3ZWA|A Chain A, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) Complexed With
3s-hydroxy-hexanoyl-coa
pdb|3ZWA|B Chain B, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) Complexed With
3s-hydroxy-hexanoyl-coa
pdb|3ZWC|A Chain A, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) Complexed With
3s-hydroxy-decanoyl-coa
pdb|3ZWC|B Chain B, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) Complexed With
3s-hydroxy-decanoyl-coa
Length = 742
Score = 27.7 bits (60), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 35/60 (58%), Gaps = 9/60 (15%)
Query: 179 QPGKSLGVIGLGGLGH-MAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQ 237
QP S+GV+GLG +G +A+ F + + ++V++ + K+ L A K +++ LE+
Sbjct: 314 QPVSSVGVLGLGTMGRGIAISFAR---VGISVVAVESDPKQ-----LDAAKKIITFTLEK 365
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.137 0.416
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,936,859
Number of Sequences: 62578
Number of extensions: 366913
Number of successful extensions: 1056
Number of sequences better than 100.0: 135
Number of HSP's better than 100.0 without gapping: 110
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 834
Number of HSP's gapped (non-prelim): 152
length of query: 299
length of database: 14,973,337
effective HSP length: 98
effective length of query: 201
effective length of database: 8,840,693
effective search space: 1776979293
effective search space used: 1776979293
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 51 (24.3 bits)