Query 022313
Match_columns 299
No_of_seqs 117 out of 1230
Neff 9.3
Searched_HMMs 46136
Date Fri Mar 29 02:35:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022313.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/022313hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG1064 AdhP Zn-dependent alco 100.0 6.3E-58 1.4E-62 399.4 25.8 282 7-298 1-285 (339)
2 KOG0023 Alcohol dehydrogenase, 100.0 7.9E-55 1.7E-59 368.6 24.9 296 1-297 1-302 (360)
3 COG1062 AdhC Zn-dependent alco 100.0 1E-48 2.3E-53 334.9 25.7 286 8-297 1-309 (366)
4 KOG0024 Sorbitol dehydrogenase 100.0 6.6E-49 1.4E-53 333.4 23.1 276 10-296 5-295 (354)
5 PLN02586 probable cinnamyl alc 100.0 5.9E-47 1.3E-51 343.6 29.9 294 5-298 8-302 (360)
6 KOG0022 Alcohol dehydrogenase, 100.0 2.5E-46 5.3E-51 315.6 24.7 285 5-291 3-313 (375)
7 PLN02178 cinnamyl-alcohol dehy 100.0 6.6E-45 1.4E-49 331.4 30.2 291 8-298 5-297 (375)
8 PLN02514 cinnamyl-alcohol dehy 100.0 1.6E-44 3.5E-49 327.4 30.3 298 1-298 1-299 (357)
9 cd08281 liver_ADH_like1 Zinc-d 100.0 4.3E-43 9.4E-48 319.8 30.4 277 19-298 18-316 (371)
10 PRK09880 L-idonate 5-dehydroge 100.0 4.9E-43 1.1E-47 316.2 28.1 280 9-298 4-290 (343)
11 PLN02740 Alcohol dehydrogenase 100.0 7E-43 1.5E-47 319.4 29.5 290 5-297 6-324 (381)
12 COG1063 Tdh Threonine dehydrog 100.0 9.8E-43 2.1E-47 313.8 27.3 280 13-297 4-293 (350)
13 TIGR03451 mycoS_dep_FDH mycoth 100.0 1.8E-42 3.8E-47 314.3 28.9 285 10-297 2-301 (358)
14 cd08301 alcohol_DH_plants Plan 100.0 6.4E-42 1.4E-46 311.9 30.4 286 9-297 2-313 (369)
15 TIGR02818 adh_III_F_hyde S-(hy 100.0 5.3E-42 1.2E-46 312.2 29.3 284 10-296 2-310 (368)
16 TIGR02822 adh_fam_2 zinc-bindi 100.0 3.2E-42 7E-47 309.0 27.2 265 20-298 13-279 (329)
17 cd08239 THR_DH_like L-threonin 100.0 5.1E-42 1.1E-46 309.1 28.4 278 11-298 2-286 (339)
18 PLN02827 Alcohol dehydrogenase 100.0 9.1E-42 2E-46 311.5 30.0 286 8-298 11-320 (378)
19 cd08277 liver_alcohol_DH_like 100.0 1E-41 2.2E-46 310.1 29.8 286 8-297 1-309 (365)
20 COG0604 Qor NADPH:quinone redu 100.0 3.5E-42 7.6E-47 306.5 25.3 256 9-298 2-267 (326)
21 cd08300 alcohol_DH_class_III c 100.0 4.1E-41 8.8E-46 306.4 29.9 286 9-297 2-312 (368)
22 cd08230 glucose_DH Glucose deh 100.0 1.1E-40 2.5E-45 302.2 28.2 268 21-298 12-299 (355)
23 TIGR02819 fdhA_non_GSH formald 100.0 2E-40 4.2E-45 303.6 28.6 260 12-277 5-301 (393)
24 TIGR03201 dearomat_had 6-hydro 100.0 7.7E-40 1.7E-44 296.0 27.6 267 20-297 9-295 (349)
25 cd08296 CAD_like Cinnamyl alco 100.0 4.1E-39 8.9E-44 289.5 28.9 278 11-298 2-283 (333)
26 cd08237 ribitol-5-phosphate_DH 100.0 1.7E-39 3.8E-44 292.8 23.8 268 8-298 1-280 (341)
27 cd08231 MDR_TM0436_like Hypoth 100.0 2.4E-38 5.2E-43 287.5 29.9 284 11-298 2-306 (361)
28 PRK10309 galactitol-1-phosphat 100.0 1.4E-38 3E-43 287.7 27.6 274 12-298 3-287 (347)
29 cd05283 CAD1 Cinnamyl alcohol 100.0 3.8E-38 8.3E-43 283.7 29.2 284 12-297 2-286 (337)
30 KOG1197 Predicted quinone oxid 100.0 6.5E-39 1.4E-43 263.1 21.1 251 7-294 8-266 (336)
31 cd08299 alcohol_DH_class_I_II_ 100.0 6.3E-38 1.4E-42 285.9 30.0 288 6-297 4-316 (373)
32 cd08233 butanediol_DH_like (2R 100.0 1E-37 2.2E-42 282.3 27.9 277 11-298 2-296 (351)
33 cd08278 benzyl_alcohol_DH Benz 100.0 8.1E-37 1.7E-41 277.9 29.6 286 8-297 1-310 (365)
34 cd05279 Zn_ADH1 Liver alcohol 100.0 3.2E-36 6.9E-41 274.0 29.1 282 12-297 3-309 (365)
35 KOG0025 Zn2+-binding dehydroge 100.0 6.4E-37 1.4E-41 255.6 21.3 259 4-297 16-287 (354)
36 PRK10083 putative oxidoreducta 100.0 3.6E-36 7.9E-41 270.8 27.7 274 11-296 2-281 (339)
37 TIGR01202 bchC 2-desacetyl-2-h 100.0 1.3E-36 2.9E-41 270.3 23.6 247 10-297 2-254 (308)
38 TIGR03366 HpnZ_proposed putati 100.0 3.3E-36 7.1E-41 264.3 24.0 228 66-298 1-244 (280)
39 cd08285 NADP_ADH NADP(H)-depen 100.0 1.1E-35 2.4E-40 269.0 28.3 278 11-296 2-292 (351)
40 cd05284 arabinose_DH_like D-ar 100.0 1.6E-35 3.6E-40 266.6 28.0 278 11-297 2-288 (340)
41 PRK09422 ethanol-active dehydr 100.0 3E-35 6.4E-40 264.7 29.4 276 11-297 2-284 (338)
42 cd08279 Zn_ADH_class_III Class 100.0 6.4E-35 1.4E-39 265.3 29.5 284 11-297 2-307 (363)
43 cd08240 6_hydroxyhexanoate_dh_ 100.0 6.8E-35 1.5E-39 263.8 27.8 278 11-297 2-297 (350)
44 cd08260 Zn_ADH6 Alcohol dehydr 100.0 1.3E-34 2.8E-39 261.4 29.5 278 11-297 2-290 (345)
45 cd08286 FDH_like_ADH2 formalde 100.0 8E-35 1.7E-39 262.8 27.9 276 12-296 3-288 (345)
46 cd08283 FDH_like_1 Glutathione 100.0 1.2E-34 2.7E-39 265.4 29.4 283 11-297 2-330 (386)
47 PRK13771 putative alcohol dehy 100.0 8.3E-35 1.8E-39 261.4 26.1 274 11-297 2-280 (334)
48 cd05278 FDH_like Formaldehyde 100.0 1.4E-34 3E-39 261.2 27.3 277 12-296 3-290 (347)
49 cd08258 Zn_ADH4 Alcohol dehydr 100.0 1.9E-34 4.2E-39 256.3 27.7 277 12-298 3-289 (306)
50 cd08246 crotonyl_coA_red croto 100.0 1.3E-34 2.8E-39 266.0 27.1 268 21-297 29-339 (393)
51 cd08245 CAD Cinnamyl alcohol d 100.0 2.8E-34 6E-39 257.6 28.2 277 12-297 2-280 (330)
52 cd08297 CAD3 Cinnamyl alcohol 100.0 4.2E-34 9.2E-39 257.6 29.3 270 19-297 11-289 (341)
53 cd08256 Zn_ADH2 Alcohol dehydr 100.0 4.2E-34 9.1E-39 258.7 28.2 277 11-297 2-298 (350)
54 cd08264 Zn_ADH_like2 Alcohol d 100.0 3E-34 6.4E-39 256.9 26.5 262 20-297 12-277 (325)
55 cd08238 sorbose_phosphate_red 100.0 2.2E-34 4.8E-39 265.6 26.4 268 8-297 1-314 (410)
56 PRK05396 tdh L-threonine 3-deh 100.0 3.9E-34 8.5E-39 257.9 27.4 276 11-298 2-287 (341)
57 cd08259 Zn_ADH5 Alcohol dehydr 100.0 1E-33 2.2E-38 253.6 28.5 275 11-297 2-280 (332)
58 cd08265 Zn_ADH3 Alcohol dehydr 100.0 4.9E-34 1.1E-38 261.3 26.9 268 20-297 37-330 (384)
59 cd08254 hydroxyacyl_CoA_DH 6-h 100.0 8.5E-34 1.8E-38 254.9 28.0 278 11-297 2-286 (338)
60 cd08298 CAD2 Cinnamyl alcohol 100.0 9.9E-34 2.1E-38 253.9 27.8 262 21-297 16-279 (329)
61 cd08263 Zn_ADH10 Alcohol dehyd 100.0 1.4E-33 3E-38 256.9 28.9 284 11-297 2-312 (367)
62 TIGR01751 crot-CoA-red crotony 100.0 1.2E-33 2.6E-38 260.0 27.7 285 4-297 4-334 (398)
63 cd08291 ETR_like_1 2-enoyl thi 100.0 6E-34 1.3E-38 255.0 25.1 241 20-298 16-268 (324)
64 cd08242 MDR_like Medium chain 100.0 2.3E-33 5E-38 250.5 27.2 266 11-297 2-268 (319)
65 cd08235 iditol_2_DH_like L-idi 100.0 3.7E-33 8.1E-38 251.6 28.5 275 11-297 2-290 (343)
66 cd08287 FDH_like_ADH3 formalde 100.0 3.6E-33 7.8E-38 251.9 28.2 275 11-297 2-291 (345)
67 PLN02702 L-idonate 5-dehydroge 100.0 4.7E-33 1E-37 253.1 28.2 270 18-297 25-308 (364)
68 cd08232 idonate-5-DH L-idonate 100.0 3.8E-33 8.2E-38 251.2 27.1 275 17-298 4-286 (339)
69 cd08292 ETR_like_2 2-enoyl thi 100.0 3.6E-33 7.8E-38 249.5 26.5 240 21-298 15-263 (324)
70 cd08282 PFDH_like Pseudomonas 100.0 8.6E-33 1.9E-37 252.3 29.2 279 12-296 3-320 (375)
71 cd08284 FDH_like_2 Glutathione 100.0 5E-33 1.1E-37 250.9 27.2 276 12-296 3-289 (344)
72 cd08261 Zn_ADH7 Alcohol dehydr 100.0 1E-32 2.2E-37 248.3 28.3 273 11-296 2-280 (337)
73 cd08266 Zn_ADH_like1 Alcohol d 100.0 9E-33 1.9E-37 248.0 27.8 271 18-298 11-290 (342)
74 cd05285 sorbitol_DH Sorbitol d 100.0 6.3E-33 1.4E-37 250.3 26.4 270 18-297 6-288 (343)
75 cd08236 sugar_DH NAD(P)-depend 100.0 2E-32 4.4E-37 246.8 27.4 275 11-298 2-285 (343)
76 cd08262 Zn_ADH8 Alcohol dehydr 100.0 6.7E-32 1.5E-36 243.3 28.1 263 12-297 3-287 (341)
77 cd08274 MDR9 Medium chain dehy 100.0 3.8E-32 8.3E-37 245.6 26.5 258 20-297 13-297 (350)
78 PLN03154 putative allyl alcoho 100.0 4.2E-32 9E-37 245.3 25.8 253 7-298 6-288 (348)
79 cd05281 TDH Threonine dehydrog 100.0 9.9E-32 2.1E-36 242.3 27.2 274 12-297 3-286 (341)
80 cd08293 PTGR2 Prostaglandin re 100.0 4.1E-32 8.8E-37 245.1 23.3 221 19-277 20-256 (345)
81 cd08295 double_bond_reductase_ 100.0 6.6E-32 1.4E-36 243.2 24.4 241 19-298 18-281 (338)
82 cd05188 MDR Medium chain reduc 100.0 1.2E-31 2.7E-36 232.9 25.0 250 36-298 1-257 (271)
83 cd08234 threonine_DH_like L-th 100.0 2.5E-31 5.4E-36 238.7 27.6 274 11-297 2-282 (334)
84 TIGR02825 B4_12hDH leukotriene 100.0 6.3E-32 1.4E-36 242.0 23.2 235 18-298 15-268 (325)
85 TIGR00692 tdh L-threonine 3-de 100.0 3.4E-31 7.3E-36 238.7 26.8 269 17-297 6-285 (340)
86 TIGR02817 adh_fam_1 zinc-bindi 100.0 2.8E-31 6E-36 238.6 25.4 244 17-295 12-265 (336)
87 cd08290 ETR 2-enoyl thioester 100.0 2.7E-31 5.8E-36 239.3 25.1 252 11-298 2-276 (341)
88 cd08294 leukotriene_B4_DH_like 100.0 6.1E-31 1.3E-35 235.7 24.5 232 20-297 19-271 (329)
89 cd05280 MDR_yhdh_yhfp Yhdh and 100.0 2E-30 4.4E-35 231.7 26.6 245 20-297 13-267 (325)
90 cd08289 MDR_yhfp_like Yhfp put 100.0 2.3E-30 4.9E-35 231.7 25.8 244 21-297 14-267 (326)
91 cd08276 MDR7 Medium chain dehy 100.0 4.3E-30 9.2E-35 230.4 27.2 264 19-298 12-284 (336)
92 PTZ00354 alcohol dehydrogenase 100.0 3.2E-30 7E-35 231.2 25.8 254 7-297 1-265 (334)
93 cd08244 MDR_enoyl_red Possible 100.0 5.5E-30 1.2E-34 228.8 26.2 244 19-298 12-266 (324)
94 TIGR02823 oxido_YhdH putative 100.0 6.5E-30 1.4E-34 228.5 26.5 246 19-297 11-265 (323)
95 PRK10754 quinone oxidoreductas 100.0 4E-30 8.7E-35 230.3 24.7 234 8-277 2-241 (327)
96 cd05282 ETR_like 2-enoyl thioe 100.0 1.3E-29 2.8E-34 226.3 25.1 240 21-297 13-261 (323)
97 cd08250 Mgc45594_like Mgc45594 100.0 2.2E-29 4.7E-34 225.7 26.3 239 19-298 15-271 (329)
98 cd08270 MDR4 Medium chain dehy 100.0 1.3E-29 2.7E-34 224.7 24.4 233 19-297 11-248 (305)
99 cd08243 quinone_oxidoreductase 100.0 2.8E-29 6.1E-34 223.5 26.3 245 20-297 13-266 (320)
100 cd08252 AL_MDR Arginate lyase 100.0 5.2E-29 1.1E-33 223.8 26.0 241 22-296 18-268 (336)
101 cd08269 Zn_ADH9 Alcohol dehydr 100.0 4.7E-29 1E-33 221.7 25.4 239 18-297 3-253 (312)
102 cd05276 p53_inducible_oxidored 100.0 7.4E-29 1.6E-33 220.3 25.4 242 19-297 12-262 (323)
103 cd08253 zeta_crystallin Zeta-c 100.0 1.4E-28 3.1E-33 218.9 25.7 248 18-297 11-266 (325)
104 cd08249 enoyl_reductase_like e 100.0 6.2E-29 1.4E-33 223.9 23.1 229 19-277 11-256 (339)
105 cd08248 RTN4I1 Human Reticulon 100.0 1.2E-28 2.5E-33 222.8 24.4 221 22-277 16-259 (350)
106 cd05286 QOR2 Quinone oxidoredu 100.0 9.9E-28 2.1E-32 212.8 26.4 240 20-297 12-259 (320)
107 cd08288 MDR_yhdh Yhdh putative 100.0 1E-27 2.2E-32 214.4 26.2 245 20-297 13-266 (324)
108 KOG1198 Zinc-binding oxidoredu 100.0 2.4E-28 5.2E-33 218.1 20.6 222 19-277 17-257 (347)
109 TIGR02824 quinone_pig3 putativ 100.0 3.5E-27 7.6E-32 210.1 26.1 243 19-298 12-263 (325)
110 cd08268 MDR2 Medium chain dehy 100.0 3.6E-27 7.9E-32 210.2 26.1 247 19-297 12-267 (328)
111 cd05288 PGDH Prostaglandin deh 100.0 3.6E-27 7.9E-32 211.2 25.0 238 19-297 17-273 (329)
112 COG2130 Putative NADP-dependen 100.0 1.3E-27 2.8E-32 201.8 20.2 237 19-298 24-280 (340)
113 cd08272 MDR6 Medium chain dehy 100.0 6.4E-27 1.4E-31 208.6 25.4 243 20-297 13-261 (326)
114 cd08273 MDR8 Medium chain dehy 100.0 5.8E-27 1.3E-31 210.0 24.8 221 18-277 11-235 (331)
115 cd08271 MDR5 Medium chain dehy 100.0 1.4E-26 3.1E-31 206.5 25.2 232 11-277 2-241 (325)
116 cd08247 AST1_like AST1 is a cy 100.0 1E-26 2.2E-31 210.5 24.0 232 12-275 3-259 (352)
117 cd08251 polyketide_synthase po 100.0 3.4E-26 7.5E-31 201.8 24.7 213 29-277 2-221 (303)
118 cd05289 MDR_like_2 alcohol deh 100.0 3.2E-26 7E-31 202.4 23.4 222 21-277 14-240 (309)
119 cd08241 QOR1 Quinone oxidoredu 99.9 9.8E-26 2.1E-30 200.4 25.1 242 19-298 12-263 (323)
120 cd08267 MDR1 Medium chain dehy 99.9 1.5E-25 3.3E-30 199.4 22.4 221 23-277 15-242 (319)
121 cd08275 MDR3 Medium chain dehy 99.9 5E-25 1.1E-29 197.5 25.2 240 20-297 12-276 (337)
122 cd05195 enoyl_red enoyl reduct 99.9 3.1E-25 6.8E-30 194.0 23.3 203 35-277 1-211 (293)
123 smart00829 PKS_ER Enoylreducta 99.9 7.5E-25 1.6E-29 191.4 21.9 217 39-297 2-229 (288)
124 cd08255 2-desacetyl-2-hydroxye 99.9 1.9E-22 4.2E-27 176.4 19.3 193 61-297 18-213 (277)
125 PF08240 ADH_N: Alcohol dehydr 99.9 3.6E-23 7.8E-28 155.8 9.8 108 34-149 1-109 (109)
126 KOG1196 Predicted NAD-dependen 99.9 8.5E-21 1.8E-25 160.2 19.8 228 30-298 33-283 (343)
127 KOG1202 Animal-type fatty acid 99.9 2.2E-21 4.7E-26 186.3 11.7 221 31-297 1441-1679(2376)
128 PF00107 ADH_zinc_N: Zinc-bind 99.6 1.6E-14 3.4E-19 112.0 11.5 107 191-298 1-114 (130)
129 PRK09424 pntA NAD(P) transhydr 99.3 8.9E-11 1.9E-15 109.7 14.5 119 179-298 163-313 (509)
130 cd00401 AdoHcyase S-adenosyl-L 99.1 1.3E-09 2.8E-14 99.5 14.3 120 169-297 189-310 (413)
131 PRK08306 dipicolinate synthase 98.7 1.3E-06 2.8E-11 77.2 16.4 119 171-296 142-261 (296)
132 TIGR00561 pntA NAD(P) transhyd 98.6 4.2E-07 9E-12 85.1 12.5 98 179-277 162-286 (511)
133 PRK05476 S-adenosyl-L-homocyst 98.6 1.2E-06 2.6E-11 80.5 13.8 110 166-283 196-308 (425)
134 TIGR00518 alaDH alanine dehydr 98.4 4.1E-06 8.9E-11 76.3 12.1 98 180-277 166-269 (370)
135 TIGR00936 ahcY adenosylhomocys 98.4 6.2E-06 1.3E-10 75.4 12.4 102 168-277 181-284 (406)
136 TIGR01035 hemA glutamyl-tRNA r 98.3 1.4E-07 3.1E-12 87.2 1.3 184 66-277 89-279 (417)
137 PLN02494 adenosylhomocysteinas 98.2 1.2E-05 2.6E-10 74.3 11.4 101 169-277 241-343 (477)
138 TIGR02853 spore_dpaA dipicolin 98.2 5.2E-05 1.1E-09 66.6 15.0 99 179-282 149-248 (287)
139 cd05213 NAD_bind_Glutamyl_tRNA 98.2 6.9E-06 1.5E-10 73.2 9.1 128 145-277 140-275 (311)
140 PRK12771 putative glutamate sy 98.1 2.2E-06 4.7E-11 82.7 4.6 97 178-275 134-253 (564)
141 PF01488 Shikimate_DH: Shikima 98.1 7.1E-06 1.5E-10 63.8 5.5 96 179-277 10-111 (135)
142 PTZ00075 Adenosylhomocysteinas 98.0 6.4E-05 1.4E-09 69.7 12.0 123 146-277 218-343 (476)
143 PRK00517 prmA ribosomal protei 98.0 9.5E-05 2.1E-09 63.8 11.9 129 135-277 79-215 (250)
144 COG0686 Ald Alanine dehydrogen 97.9 8.7E-05 1.9E-09 64.3 9.9 98 180-277 167-270 (371)
145 PRK08324 short chain dehydroge 97.9 0.0001 2.2E-09 72.7 11.7 131 134-277 386-559 (681)
146 COG4221 Short-chain alcohol de 97.8 0.00013 2.9E-09 61.3 9.5 75 180-254 5-91 (246)
147 COG2518 Pcm Protein-L-isoaspar 97.8 0.00017 3.8E-09 59.5 9.8 119 153-275 47-170 (209)
148 PRK11873 arsM arsenite S-adeno 97.8 0.00014 3.1E-09 63.5 9.8 100 177-277 74-185 (272)
149 KOG1209 1-Acyl dihydroxyaceton 97.8 0.00033 7.1E-09 57.6 10.9 108 179-286 5-150 (289)
150 PRK00045 hemA glutamyl-tRNA re 97.8 0.00065 1.4E-08 63.2 13.6 181 66-277 91-282 (423)
151 COG1748 LYS9 Saccharopine dehy 97.6 0.00043 9.3E-09 62.8 10.3 96 182-277 2-101 (389)
152 PF13460 NAD_binding_10: NADH( 97.5 0.00095 2.1E-08 54.3 10.2 91 184-277 1-99 (183)
153 PRK00377 cbiT cobalt-precorrin 97.5 0.0021 4.5E-08 53.4 12.3 97 177-274 37-144 (198)
154 PLN03209 translocon at the inn 97.5 0.0014 3E-08 62.5 12.4 100 178-277 77-209 (576)
155 PRK12742 oxidoreductase; Provi 97.5 0.0019 4.2E-08 54.7 12.3 98 180-277 5-133 (237)
156 PRK05786 fabG 3-ketoacyl-(acyl 97.5 0.0014 3E-08 55.6 11.4 98 180-277 4-137 (238)
157 PF12847 Methyltransf_18: Meth 97.5 0.00096 2.1E-08 49.6 9.1 93 180-274 1-110 (112)
158 cd01080 NAD_bind_m-THF_DH_Cycl 97.5 0.0019 4.2E-08 52.0 10.7 96 159-277 22-118 (168)
159 cd01078 NAD_bind_H4MPT_DH NADP 97.4 0.0034 7.5E-08 51.8 12.4 99 179-277 26-131 (194)
160 COG0300 DltE Short-chain dehyd 97.4 0.00088 1.9E-08 57.7 8.9 76 179-254 4-94 (265)
161 COG3967 DltE Short-chain dehyd 97.4 0.00089 1.9E-08 54.9 8.4 74 180-253 4-87 (245)
162 cd01065 NAD_bind_Shikimate_DH 97.4 0.0015 3.3E-08 51.7 9.6 105 170-277 8-118 (155)
163 PF00670 AdoHcyase_NAD: S-aden 97.4 0.0024 5.1E-08 50.8 10.3 106 169-282 10-118 (162)
164 PF02826 2-Hacid_dh_C: D-isome 97.4 0.0006 1.3E-08 55.6 7.1 90 179-276 34-128 (178)
165 TIGR01809 Shik-DH-AROM shikima 97.4 0.0018 4E-08 56.8 10.4 77 179-255 123-201 (282)
166 PRK08265 short chain dehydroge 97.4 0.0043 9.3E-08 53.6 12.5 98 180-277 5-138 (261)
167 PRK14175 bifunctional 5,10-met 97.4 0.0024 5.2E-08 55.7 10.8 96 159-277 136-232 (286)
168 PRK06182 short chain dehydroge 97.3 0.0032 7E-08 54.7 11.4 74 180-254 2-84 (273)
169 PRK13940 glutamyl-tRNA reducta 97.3 0.004 8.7E-08 57.6 12.2 95 179-277 179-275 (414)
170 PRK05693 short chain dehydroge 97.3 0.0057 1.2E-07 53.2 12.6 72 182-254 2-82 (274)
171 TIGR00406 prmA ribosomal prote 97.3 0.0047 1E-07 54.4 12.0 96 179-277 158-261 (288)
172 PRK05993 short chain dehydroge 97.3 0.0061 1.3E-07 53.2 12.7 73 180-253 3-85 (277)
173 COG2242 CobL Precorrin-6B meth 97.3 0.0073 1.6E-07 49.0 11.9 98 178-277 32-137 (187)
174 KOG1205 Predicted dehydrogenas 97.3 0.0027 5.9E-08 55.2 9.9 107 179-285 10-160 (282)
175 COG0373 HemA Glutamyl-tRNA red 97.2 0.0054 1.2E-07 56.1 12.1 95 179-277 176-276 (414)
176 PRK12548 shikimate 5-dehydroge 97.2 0.0036 7.8E-08 55.2 10.7 98 179-276 124-237 (289)
177 PRK08618 ornithine cyclodeamin 97.2 0.0019 4E-08 58.0 8.8 105 173-284 120-232 (325)
178 PRK12549 shikimate 5-dehydroge 97.2 0.0018 4E-08 56.9 8.6 94 179-275 125-227 (284)
179 PF01262 AlaDh_PNT_C: Alanine 97.2 0.001 2.2E-08 53.8 6.3 96 180-276 19-140 (168)
180 COG0169 AroE Shikimate 5-dehyd 97.2 0.0026 5.6E-08 55.6 9.1 103 168-274 111-225 (283)
181 PRK05872 short chain dehydroge 97.2 0.0038 8.3E-08 55.1 10.4 75 180-254 8-95 (296)
182 PRK00258 aroE shikimate 5-dehy 97.2 0.0028 6.1E-08 55.6 9.4 96 179-276 121-222 (278)
183 TIGR01318 gltD_gamma_fam gluta 97.2 0.00074 1.6E-08 63.7 6.0 77 179-256 139-238 (467)
184 PRK07109 short chain dehydroge 97.2 0.008 1.7E-07 54.1 12.4 98 180-277 7-145 (334)
185 PRK11705 cyclopropane fatty ac 97.2 0.0071 1.5E-07 55.5 12.1 112 160-275 147-267 (383)
186 PF03435 Saccharop_dh: Sacchar 97.1 0.0029 6.2E-08 58.2 9.6 92 184-275 1-98 (386)
187 PRK08339 short chain dehydroge 97.1 0.0092 2E-07 51.7 12.2 98 180-277 7-145 (263)
188 PRK14027 quinate/shikimate deh 97.1 0.005 1.1E-07 54.0 10.5 74 179-253 125-203 (283)
189 TIGR02469 CbiT precorrin-6Y C5 97.1 0.014 3.1E-07 43.9 11.8 97 178-275 17-122 (124)
190 PRK08261 fabG 3-ketoacyl-(acyl 97.1 0.011 2.5E-07 55.4 13.2 75 180-254 209-294 (450)
191 PRK12939 short chain dehydroge 97.1 0.0077 1.7E-07 51.3 11.2 75 180-254 6-94 (250)
192 PF01135 PCMT: Protein-L-isoas 97.1 0.0017 3.6E-08 54.4 6.7 95 178-274 70-171 (209)
193 PRK07060 short chain dehydroge 97.1 0.0052 1.1E-07 52.3 10.0 76 179-254 7-87 (245)
194 PRK06139 short chain dehydroge 97.1 0.0046 1E-07 55.6 9.9 75 179-253 5-93 (330)
195 PRK06057 short chain dehydroge 97.0 0.0066 1.4E-07 52.2 10.4 75 180-254 6-89 (255)
196 cd01075 NAD_bind_Leu_Phe_Val_D 97.0 0.014 3.1E-07 48.5 11.9 49 179-227 26-74 (200)
197 PRK09186 flagellin modificatio 97.0 0.013 2.8E-07 50.2 12.3 74 180-253 3-92 (256)
198 PRK07326 short chain dehydroge 97.0 0.0085 1.8E-07 50.7 11.0 75 180-254 5-92 (237)
199 TIGR00507 aroE shikimate 5-deh 97.0 0.0062 1.3E-07 53.1 10.2 104 169-277 105-216 (270)
200 PRK14192 bifunctional 5,10-met 97.0 0.0084 1.8E-07 52.5 10.9 93 162-277 140-233 (283)
201 PRK12749 quinate/shikimate deh 97.0 0.0089 1.9E-07 52.6 11.1 85 169-253 112-205 (288)
202 PRK06484 short chain dehydroge 97.0 0.014 3E-07 55.8 13.3 99 179-277 267-402 (520)
203 PRK13943 protein-L-isoaspartat 97.0 0.013 2.7E-07 52.4 11.8 95 178-274 78-179 (322)
204 PRK08267 short chain dehydroge 97.0 0.015 3.2E-07 50.1 12.1 73 182-254 2-87 (260)
205 PRK07806 short chain dehydroge 97.0 0.0099 2.1E-07 50.7 10.9 98 180-277 5-136 (248)
206 PRK12550 shikimate 5-dehydroge 97.0 0.0068 1.5E-07 52.8 9.9 77 168-253 110-187 (272)
207 PRK06200 2,3-dihydroxy-2,3-dih 97.0 0.0069 1.5E-07 52.3 9.9 75 180-254 5-90 (263)
208 PRK07231 fabG 3-ketoacyl-(acyl 97.0 0.016 3.4E-07 49.4 12.0 75 180-254 4-91 (251)
209 PRK08415 enoyl-(acyl carrier p 97.0 0.019 4.1E-07 50.1 12.7 98 180-277 4-145 (274)
210 PLN00203 glutamyl-tRNA reducta 97.0 0.0077 1.7E-07 57.3 10.7 97 180-277 265-371 (519)
211 PRK12809 putative oxidoreducta 96.9 0.0032 6.9E-08 61.8 8.3 75 180-255 309-406 (639)
212 PF13602 ADH_zinc_N_2: Zinc-bi 96.9 0.0003 6.6E-09 53.7 0.9 50 224-276 1-52 (127)
213 COG2230 Cfa Cyclopropane fatty 96.9 0.0043 9.3E-08 53.9 7.8 109 166-277 58-178 (283)
214 PRK03369 murD UDP-N-acetylmura 96.9 0.0054 1.2E-07 58.2 9.2 74 178-256 9-82 (488)
215 PRK13942 protein-L-isoaspartat 96.9 0.011 2.4E-07 49.7 10.1 96 177-274 73-175 (212)
216 PRK12829 short chain dehydroge 96.9 0.0092 2E-07 51.4 9.9 77 179-255 9-97 (264)
217 PRK12367 short chain dehydroge 96.9 0.0082 1.8E-07 51.6 9.5 73 180-254 13-89 (245)
218 PRK14194 bifunctional 5,10-met 96.9 0.011 2.3E-07 52.1 10.1 96 159-277 137-233 (301)
219 PRK07340 ornithine cyclodeamin 96.9 0.0064 1.4E-07 54.0 8.9 107 174-287 119-231 (304)
220 PRK07825 short chain dehydroge 96.9 0.011 2.4E-07 51.3 10.3 75 180-254 4-88 (273)
221 TIGR03840 TMPT_Se_Te thiopurin 96.8 0.0088 1.9E-07 50.2 8.9 97 179-277 33-154 (213)
222 PRK06196 oxidoreductase; Provi 96.8 0.0099 2.1E-07 53.0 9.8 75 180-254 25-109 (315)
223 TIGR03325 BphB_TodD cis-2,3-di 96.8 0.011 2.3E-07 51.1 9.8 74 180-253 4-88 (262)
224 PRK06500 short chain dehydroge 96.8 0.012 2.5E-07 50.2 9.7 75 180-254 5-90 (249)
225 PRK07832 short chain dehydroge 96.8 0.033 7.1E-07 48.4 12.7 73 182-254 1-88 (272)
226 CHL00194 ycf39 Ycf39; Provisio 96.8 0.017 3.7E-07 51.5 11.1 94 183-277 2-111 (317)
227 cd05311 NAD_bind_2_malic_enz N 96.8 0.019 4.1E-07 48.7 10.7 109 164-277 8-130 (226)
228 TIGR01470 cysG_Nterm siroheme 96.8 0.036 7.8E-07 46.2 12.2 91 180-274 8-99 (205)
229 TIGR02992 ectoine_eutC ectoine 96.8 0.0088 1.9E-07 53.7 9.0 102 179-285 127-236 (326)
230 PRK05866 short chain dehydroge 96.8 0.0069 1.5E-07 53.4 8.3 75 180-254 39-127 (293)
231 PRK04457 spermidine synthase; 96.8 0.036 7.8E-07 48.1 12.5 95 179-274 65-176 (262)
232 PRK07502 cyclohexadienyl dehyd 96.7 0.014 3.1E-07 51.9 10.2 91 182-277 7-102 (307)
233 PRK07063 short chain dehydroge 96.7 0.011 2.4E-07 50.9 9.3 75 180-254 6-96 (260)
234 PRK08263 short chain dehydroge 96.7 0.037 8.1E-07 48.1 12.7 74 181-254 3-87 (275)
235 COG3288 PntA NAD/NADP transhyd 96.7 0.0076 1.7E-07 52.4 7.8 120 179-299 162-309 (356)
236 PRK06718 precorrin-2 dehydroge 96.7 0.025 5.4E-07 47.1 10.8 92 179-275 8-100 (202)
237 PRK07062 short chain dehydroge 96.7 0.013 2.9E-07 50.5 9.5 75 180-254 7-97 (265)
238 PF10727 Rossmann-like: Rossma 96.7 0.0072 1.6E-07 46.3 6.8 83 179-268 8-91 (127)
239 PF02353 CMAS: Mycolic acid cy 96.7 0.0032 6.9E-08 55.0 5.5 97 173-273 55-164 (273)
240 PRK07576 short chain dehydroge 96.7 0.011 2.3E-07 51.3 8.7 75 179-253 7-95 (264)
241 COG2227 UbiG 2-polyprenyl-3-me 96.7 0.019 4.1E-07 48.4 9.7 92 179-274 58-160 (243)
242 PRK09072 short chain dehydroge 96.7 0.035 7.5E-07 47.9 11.8 75 180-254 4-90 (263)
243 PRK13944 protein-L-isoaspartat 96.7 0.029 6.2E-07 46.8 10.9 95 178-274 70-172 (205)
244 PRK07831 short chain dehydroge 96.6 0.022 4.8E-07 49.1 10.6 76 179-254 15-107 (262)
245 PRK05867 short chain dehydroge 96.6 0.014 3E-07 50.1 9.2 75 180-254 8-96 (253)
246 PRK07523 gluconate 5-dehydroge 96.6 0.016 3.4E-07 49.8 9.6 75 180-254 9-97 (255)
247 PRK05854 short chain dehydroge 96.6 0.013 2.8E-07 52.2 9.3 75 180-254 13-103 (313)
248 PRK06079 enoyl-(acyl carrier p 96.6 0.044 9.6E-07 47.0 12.3 97 180-277 6-145 (252)
249 PRK12828 short chain dehydroge 96.6 0.014 3.1E-07 49.2 9.1 75 180-254 6-92 (239)
250 PF02882 THF_DHG_CYH_C: Tetrah 96.6 0.022 4.8E-07 45.4 9.5 96 159-277 14-110 (160)
251 PRK12429 3-hydroxybutyrate deh 96.6 0.034 7.4E-07 47.5 11.6 75 180-254 3-91 (258)
252 PRK06128 oxidoreductase; Provi 96.6 0.058 1.2E-06 47.7 13.3 98 180-277 54-193 (300)
253 TIGR02356 adenyl_thiF thiazole 96.6 0.017 3.7E-07 48.1 9.3 96 180-275 20-143 (202)
254 PLN02366 spermidine synthase 96.6 0.028 6.2E-07 49.9 11.1 96 179-275 90-206 (308)
255 PRK07424 bifunctional sterol d 96.6 0.019 4.1E-07 53.0 10.2 75 180-254 177-255 (406)
256 PRK00107 gidB 16S rRNA methylt 96.6 0.03 6.4E-07 46.0 10.4 96 177-275 42-145 (187)
257 PRK07814 short chain dehydroge 96.6 0.017 3.8E-07 49.8 9.6 76 179-254 8-97 (263)
258 PRK14191 bifunctional 5,10-met 96.6 0.026 5.6E-07 49.3 10.4 96 159-277 135-231 (285)
259 PRK05717 oxidoreductase; Valid 96.6 0.023 4.9E-07 48.8 10.2 76 179-254 8-94 (255)
260 cd05212 NAD_bind_m-THF_DH_Cycl 96.6 0.04 8.8E-07 42.9 10.4 95 160-277 7-102 (140)
261 PRK06949 short chain dehydroge 96.6 0.023 5E-07 48.7 10.1 76 179-254 7-96 (258)
262 PRK09291 short chain dehydroge 96.6 0.017 3.7E-07 49.5 9.3 74 181-254 2-83 (257)
263 PRK10792 bifunctional 5,10-met 96.6 0.025 5.4E-07 49.4 10.1 95 160-277 138-233 (285)
264 PRK08217 fabG 3-ketoacyl-(acyl 96.6 0.024 5.1E-07 48.3 10.1 74 180-253 4-91 (253)
265 COG2910 Putative NADH-flavin r 96.6 0.019 4.2E-07 46.4 8.5 98 183-284 2-113 (211)
266 TIGR00080 pimt protein-L-isoas 96.6 0.025 5.5E-07 47.5 10.0 95 178-274 75-176 (215)
267 PRK08594 enoyl-(acyl carrier p 96.5 0.059 1.3E-06 46.5 12.5 98 180-277 6-149 (257)
268 PRK00811 spermidine synthase; 96.5 0.04 8.6E-07 48.4 11.4 95 179-274 75-190 (283)
269 PRK06180 short chain dehydroge 96.5 0.022 4.7E-07 49.7 9.8 75 180-254 3-88 (277)
270 PRK14189 bifunctional 5,10-met 96.5 0.024 5.3E-07 49.5 9.8 95 160-277 137-232 (285)
271 PF13241 NAD_binding_7: Putati 96.5 0.0053 1.1E-07 45.2 4.9 89 179-277 5-93 (103)
272 PRK06484 short chain dehydroge 96.5 0.021 4.5E-07 54.6 10.3 76 179-254 3-89 (520)
273 PRK07478 short chain dehydroge 96.5 0.019 4.1E-07 49.2 9.2 75 180-254 5-93 (254)
274 PRK05876 short chain dehydroge 96.5 0.02 4.3E-07 50.0 9.4 75 180-254 5-93 (275)
275 PRK07453 protochlorophyllide o 96.5 0.013 2.9E-07 52.2 8.5 74 180-253 5-92 (322)
276 PRK07890 short chain dehydroge 96.5 0.017 3.7E-07 49.5 8.8 76 179-254 3-92 (258)
277 PRK12475 thiamine/molybdopteri 96.5 0.018 3.9E-07 51.9 9.1 76 180-256 23-128 (338)
278 PRK07024 short chain dehydroge 96.5 0.03 6.5E-07 48.2 10.3 74 181-254 2-88 (257)
279 KOG1210 Predicted 3-ketosphing 96.5 0.018 3.9E-07 50.4 8.7 76 179-254 31-122 (331)
280 COG0569 TrkA K+ transport syst 96.5 0.025 5.5E-07 47.9 9.6 82 183-265 2-86 (225)
281 PRK06194 hypothetical protein; 96.5 0.015 3.3E-07 50.8 8.6 75 180-254 5-93 (287)
282 PF03807 F420_oxidored: NADP o 96.5 0.025 5.4E-07 40.8 8.3 86 183-274 1-93 (96)
283 PRK01581 speE spermidine synth 96.5 0.055 1.2E-06 48.9 11.9 96 179-276 149-269 (374)
284 PRK06505 enoyl-(acyl carrier p 96.5 0.028 6.1E-07 48.9 10.1 75 180-254 6-95 (271)
285 PF02254 TrkA_N: TrkA-N domain 96.5 0.095 2.1E-06 39.1 11.7 90 184-274 1-95 (116)
286 PRK14188 bifunctional 5,10-met 96.5 0.033 7.1E-07 49.0 10.3 95 159-277 136-232 (296)
287 PRK06101 short chain dehydroge 96.5 0.084 1.8E-06 44.8 12.8 72 182-253 2-80 (240)
288 KOG1201 Hydroxysteroid 17-beta 96.4 0.019 4.1E-07 50.0 8.5 75 179-253 36-123 (300)
289 PRK13255 thiopurine S-methyltr 96.4 0.023 4.9E-07 47.9 8.9 94 179-274 36-154 (218)
290 PLN02253 xanthoxin dehydrogena 96.4 0.024 5.2E-07 49.4 9.5 75 180-254 17-104 (280)
291 PRK07574 formate dehydrogenase 96.4 0.029 6.3E-07 51.4 10.0 89 180-275 191-284 (385)
292 PLN03075 nicotianamine synthas 96.4 0.042 9E-07 48.3 10.5 104 171-275 115-233 (296)
293 PRK08589 short chain dehydroge 96.4 0.028 6E-07 48.9 9.6 74 180-254 5-92 (272)
294 TIGR00417 speE spermidine synt 96.4 0.057 1.2E-06 47.1 11.4 96 179-275 71-186 (270)
295 PRK08017 oxidoreductase; Provi 96.4 0.035 7.6E-07 47.5 10.1 72 182-254 3-84 (256)
296 PRK05884 short chain dehydroge 96.4 0.026 5.6E-07 47.6 9.0 71 183-253 2-78 (223)
297 PRK14178 bifunctional 5,10-met 96.3 0.04 8.7E-07 47.9 10.1 96 159-277 130-226 (279)
298 PRK07985 oxidoreductase; Provi 96.3 0.11 2.4E-06 45.8 13.2 99 179-277 47-187 (294)
299 PRK07067 sorbitol dehydrogenas 96.3 0.042 9.2E-07 47.1 10.4 75 180-254 5-90 (257)
300 PRK08177 short chain dehydroge 96.3 0.03 6.5E-07 47.1 9.2 72 182-254 2-81 (225)
301 PRK09242 tropinone reductase; 96.3 0.029 6.2E-07 48.2 9.3 75 180-254 8-98 (257)
302 PRK06940 short chain dehydroge 96.3 0.062 1.3E-06 46.9 11.4 96 181-277 2-127 (275)
303 PRK06841 short chain dehydroge 96.3 0.036 7.9E-07 47.4 9.8 74 180-254 14-99 (255)
304 PRK07677 short chain dehydroge 96.3 0.028 6.1E-07 48.1 9.1 74 181-254 1-88 (252)
305 PRK12823 benD 1,6-dihydroxycyc 96.3 0.1 2.3E-06 44.7 12.6 74 180-254 7-94 (260)
306 PRK06483 dihydromonapterin red 96.3 0.045 9.8E-07 46.3 10.2 74 181-254 2-84 (236)
307 PRK08862 short chain dehydroge 96.3 0.032 7E-07 47.2 9.1 74 180-253 4-92 (227)
308 PRK06125 short chain dehydroge 96.3 0.029 6.2E-07 48.3 9.0 75 180-254 6-91 (259)
309 PRK07774 short chain dehydroge 96.2 0.035 7.7E-07 47.3 9.3 75 180-254 5-93 (250)
310 PRK07533 enoyl-(acyl carrier p 96.2 0.045 9.8E-07 47.2 10.0 98 180-277 9-150 (258)
311 PRK08643 acetoin reductase; Va 96.2 0.031 6.8E-07 47.9 9.0 74 181-254 2-89 (256)
312 PRK14618 NAD(P)H-dependent gly 96.2 0.028 6.1E-07 50.5 8.9 91 182-276 5-105 (328)
313 PRK06138 short chain dehydroge 96.2 0.024 5.2E-07 48.4 8.2 75 180-254 4-91 (252)
314 PRK06719 precorrin-2 dehydroge 96.2 0.027 5.9E-07 44.9 7.8 84 179-269 11-94 (157)
315 PRK08159 enoyl-(acyl carrier p 96.2 0.048 1E-06 47.5 10.1 99 179-277 8-150 (272)
316 PF03446 NAD_binding_2: NAD bi 96.2 0.028 6.1E-07 45.0 7.9 89 182-277 2-96 (163)
317 PRK13394 3-hydroxybutyrate deh 96.2 0.041 8.9E-07 47.2 9.5 75 180-254 6-94 (262)
318 PRK05875 short chain dehydroge 96.2 0.036 7.8E-07 48.1 9.2 75 180-254 6-96 (276)
319 PRK07035 short chain dehydroge 96.2 0.041 8.8E-07 47.1 9.3 75 180-254 7-95 (252)
320 PF05368 NmrA: NmrA-like famil 96.2 0.056 1.2E-06 45.8 10.1 70 184-254 1-74 (233)
321 PRK13243 glyoxylate reductase; 96.2 0.035 7.5E-07 50.0 9.1 88 180-276 149-241 (333)
322 PRK12936 3-ketoacyl-(acyl-carr 96.2 0.048 1E-06 46.2 9.7 75 180-254 5-90 (245)
323 TIGR02371 ala_DH_arch alanine 96.2 0.032 7E-07 50.0 8.8 107 173-285 121-234 (325)
324 PRK08340 glucose-1-dehydrogena 96.1 0.041 8.8E-07 47.4 9.3 72 183-254 2-86 (259)
325 PRK08317 hypothetical protein; 96.1 0.056 1.2E-06 45.6 10.0 99 176-276 15-125 (241)
326 PRK06197 short chain dehydroge 96.1 0.029 6.3E-07 49.7 8.5 75 179-253 14-104 (306)
327 PRK12481 2-deoxy-D-gluconate 3 96.1 0.062 1.4E-06 46.1 10.3 75 180-254 7-93 (251)
328 PRK08085 gluconate 5-dehydroge 96.1 0.039 8.4E-07 47.3 9.0 75 180-254 8-96 (254)
329 PRK06172 short chain dehydroge 96.1 0.041 8.8E-07 47.1 9.1 75 180-254 6-94 (253)
330 PRK08213 gluconate 5-dehydroge 96.1 0.045 9.8E-07 47.0 9.4 75 180-254 11-99 (259)
331 PRK15469 ghrA bifunctional gly 96.1 0.039 8.5E-07 49.1 9.1 89 179-276 134-227 (312)
332 PRK08644 thiamine biosynthesis 96.1 0.04 8.6E-07 46.2 8.7 88 180-267 27-140 (212)
333 PRK08291 ectoine utilization p 96.1 0.034 7.5E-07 50.0 8.8 101 179-285 130-239 (330)
334 PRK14179 bifunctional 5,10-met 96.1 0.048 1.1E-06 47.6 9.3 95 160-277 137-232 (284)
335 PLN03139 formate dehydrogenase 96.1 0.034 7.5E-07 50.9 8.8 90 179-275 197-291 (386)
336 PRK07074 short chain dehydroge 96.1 0.064 1.4E-06 46.0 10.2 74 181-254 2-87 (257)
337 PRK04148 hypothetical protein; 96.1 0.083 1.8E-06 40.7 9.6 88 179-269 15-102 (134)
338 PLN02928 oxidoreductase family 96.1 0.034 7.4E-07 50.3 8.7 95 179-275 157-262 (347)
339 PRK06482 short chain dehydroge 96.1 0.066 1.4E-06 46.5 10.4 73 182-254 3-86 (276)
340 PRK10538 malonic semialdehyde 96.1 0.048 1E-06 46.6 9.3 72 183-254 2-84 (248)
341 PRK14176 bifunctional 5,10-met 96.1 0.068 1.5E-06 46.7 10.0 96 159-277 142-238 (287)
342 PRK06720 hypothetical protein; 96.1 0.061 1.3E-06 43.4 9.2 75 180-254 15-103 (169)
343 COG1648 CysG Siroheme synthase 96.1 0.072 1.6E-06 44.6 9.9 95 179-277 10-105 (210)
344 PRK06603 enoyl-(acyl carrier p 96.1 0.057 1.2E-06 46.6 9.7 75 179-253 6-95 (260)
345 PRK08277 D-mannonate oxidoredu 96.0 0.066 1.4E-06 46.6 10.2 74 180-253 9-96 (278)
346 PRK07454 short chain dehydroge 96.0 0.053 1.2E-06 46.0 9.4 76 179-254 4-93 (241)
347 PRK07069 short chain dehydroge 96.0 0.12 2.5E-06 44.1 11.5 94 184-277 2-139 (251)
348 PRK03612 spermidine synthase; 96.0 0.073 1.6E-06 51.0 11.1 96 179-275 296-415 (521)
349 PRK08762 molybdopterin biosynt 96.0 0.054 1.2E-06 49.6 9.9 77 180-256 134-237 (376)
350 PRK07666 fabG 3-ketoacyl-(acyl 96.0 0.035 7.5E-07 47.1 8.1 75 180-254 6-94 (239)
351 PRK06124 gluconate 5-dehydroge 96.0 0.054 1.2E-06 46.4 9.4 76 179-254 9-98 (256)
352 PRK07688 thiamine/molybdopteri 96.0 0.043 9.3E-07 49.5 9.0 77 180-256 23-128 (339)
353 PRK06181 short chain dehydroge 96.0 0.037 8E-07 47.7 8.4 74 181-254 1-88 (263)
354 TIGR03589 PseB UDP-N-acetylglu 96.0 0.055 1.2E-06 48.4 9.7 75 180-254 3-84 (324)
355 PF00106 adh_short: short chai 96.0 0.054 1.2E-06 43.0 8.8 73 182-254 1-90 (167)
356 PRK13403 ketol-acid reductoiso 96.0 0.084 1.8E-06 46.9 10.4 89 179-275 14-106 (335)
357 PLN02823 spermine synthase 96.0 0.13 2.8E-06 46.3 11.8 94 180-274 103-219 (336)
358 PRK06701 short chain dehydroge 96.0 0.21 4.6E-06 43.9 13.2 99 179-277 44-183 (290)
359 PRK12747 short chain dehydroge 96.0 0.099 2.1E-06 44.7 10.8 98 180-277 3-146 (252)
360 PRK12769 putative oxidoreducta 96.0 0.026 5.7E-07 55.6 7.9 76 179-255 325-423 (654)
361 PRK14982 acyl-ACP reductase; P 95.9 0.067 1.4E-06 48.1 9.7 93 179-277 153-248 (340)
362 PRK06463 fabG 3-ketoacyl-(acyl 95.9 0.086 1.9E-06 45.2 10.2 74 180-254 6-89 (255)
363 PF00899 ThiF: ThiF family; I 95.9 0.11 2.3E-06 40.1 9.8 93 181-273 2-121 (135)
364 PRK07097 gluconate 5-dehydroge 95.9 0.089 1.9E-06 45.4 10.3 75 180-254 9-97 (265)
365 PF07991 IlvN: Acetohydroxy ac 95.9 0.059 1.3E-06 42.8 8.2 89 180-275 3-95 (165)
366 TIGR02354 thiF_fam2 thiamine b 95.9 0.061 1.3E-06 44.7 8.8 34 180-213 20-54 (200)
367 PRK14172 bifunctional 5,10-met 95.9 0.085 1.8E-06 45.9 9.8 95 160-277 137-232 (278)
368 PRK07791 short chain dehydroge 95.9 0.091 2E-06 46.1 10.3 76 179-254 4-102 (286)
369 PRK12826 3-ketoacyl-(acyl-carr 95.9 0.046 9.9E-07 46.5 8.3 75 180-254 5-93 (251)
370 PRK08251 short chain dehydroge 95.9 0.067 1.4E-06 45.6 9.3 73 181-253 2-90 (248)
371 TIGR02355 moeB molybdopterin s 95.9 0.096 2.1E-06 44.8 10.0 78 180-257 23-127 (240)
372 cd01487 E1_ThiF_like E1_ThiF_l 95.9 0.074 1.6E-06 43.1 8.9 92 183-274 1-119 (174)
373 PRK08703 short chain dehydroge 95.8 0.066 1.4E-06 45.4 9.1 44 180-223 5-49 (239)
374 TIGR01289 LPOR light-dependent 95.8 0.085 1.8E-06 47.0 10.0 74 181-254 3-91 (314)
375 PRK07904 short chain dehydroge 95.8 0.051 1.1E-06 46.7 8.4 76 179-254 6-97 (253)
376 PF01210 NAD_Gly3P_dh_N: NAD-d 95.8 0.025 5.5E-07 45.0 6.0 88 183-274 1-101 (157)
377 PRK07984 enoyl-(acyl carrier p 95.8 0.092 2E-06 45.5 10.0 74 180-253 5-93 (262)
378 PRK03562 glutathione-regulated 95.8 0.074 1.6E-06 52.1 10.3 92 181-273 400-496 (621)
379 PRK08690 enoyl-(acyl carrier p 95.8 0.086 1.9E-06 45.5 9.8 75 180-254 5-94 (261)
380 PRK14177 bifunctional 5,10-met 95.8 0.093 2E-06 45.8 9.8 96 159-277 137-233 (284)
381 KOG0725 Reductases with broad 95.8 0.078 1.7E-06 46.3 9.4 76 179-254 6-99 (270)
382 PRK06198 short chain dehydroge 95.8 0.067 1.5E-06 45.9 9.1 76 179-254 4-94 (260)
383 PRK11036 putative S-adenosyl-L 95.8 0.11 2.4E-06 44.9 10.3 93 179-274 43-148 (255)
384 PRK05562 precorrin-2 dehydroge 95.8 0.28 6.1E-06 41.3 12.3 92 179-275 23-116 (223)
385 PRK06522 2-dehydropantoate 2-r 95.8 0.058 1.3E-06 47.6 8.8 89 183-274 2-99 (304)
386 PLN00141 Tic62-NAD(P)-related 95.8 0.077 1.7E-06 45.5 9.3 99 179-277 15-133 (251)
387 PRK06914 short chain dehydroge 95.8 0.06 1.3E-06 46.8 8.8 75 180-254 2-91 (280)
388 PRK07889 enoyl-(acyl carrier p 95.8 0.088 1.9E-06 45.3 9.7 75 180-254 6-95 (256)
389 COG0421 SpeE Spermidine syntha 95.8 0.17 3.7E-06 44.3 11.3 92 182-274 78-189 (282)
390 TIGR01832 kduD 2-deoxy-D-gluco 95.8 0.06 1.3E-06 45.8 8.6 75 180-254 4-90 (248)
391 PRK06997 enoyl-(acyl carrier p 95.8 0.068 1.5E-06 46.2 9.0 75 180-254 5-94 (260)
392 PRK06046 alanine dehydrogenase 95.8 0.059 1.3E-06 48.4 8.7 101 179-285 127-235 (326)
393 PRK06141 ornithine cyclodeamin 95.8 0.19 4.2E-06 44.8 12.0 105 175-284 120-230 (314)
394 PRK06935 2-deoxy-D-gluconate 3 95.7 0.056 1.2E-06 46.4 8.3 75 179-254 13-101 (258)
395 PRK06179 short chain dehydroge 95.7 0.061 1.3E-06 46.5 8.6 72 180-254 3-83 (270)
396 PF02558 ApbA: Ketopantoate re 95.7 0.047 1E-06 42.9 7.2 90 184-275 1-101 (151)
397 PRK12937 short chain dehydroge 95.7 0.27 5.9E-06 41.6 12.5 99 179-277 3-141 (245)
398 PLN02896 cinnamyl-alcohol dehy 95.7 0.089 1.9E-06 47.6 10.0 76 179-254 8-89 (353)
399 PRK07402 precorrin-6B methylas 95.7 0.3 6.5E-06 40.2 12.3 100 177-277 37-144 (196)
400 COG2264 PrmA Ribosomal protein 95.7 0.14 3.1E-06 44.9 10.7 98 178-277 160-265 (300)
401 PRK12480 D-lactate dehydrogena 95.7 0.082 1.8E-06 47.5 9.5 85 180-275 145-234 (330)
402 PLN02989 cinnamyl-alcohol dehy 95.7 0.05 1.1E-06 48.5 8.2 76 179-254 3-87 (325)
403 PRK09310 aroDE bifunctional 3- 95.7 0.1 2.2E-06 49.4 10.5 73 179-256 330-402 (477)
404 PRK06113 7-alpha-hydroxysteroi 95.7 0.075 1.6E-06 45.6 9.0 75 180-254 10-98 (255)
405 PRK14190 bifunctional 5,10-met 95.7 0.12 2.7E-06 45.1 10.2 95 160-277 137-232 (284)
406 PRK14180 bifunctional 5,10-met 95.7 0.11 2.3E-06 45.4 9.7 96 159-277 136-232 (282)
407 KOG1208 Dehydrogenases with di 95.7 0.072 1.6E-06 47.4 8.8 110 179-288 33-184 (314)
408 PF01118 Semialdhyde_dh: Semia 95.7 0.033 7.2E-07 42.2 5.9 91 183-277 1-99 (121)
409 PRK12921 2-dehydropantoate 2-r 95.7 0.081 1.8E-06 46.8 9.2 89 183-274 2-101 (305)
410 PRK11207 tellurite resistance 95.7 0.11 2.3E-06 43.1 9.4 93 179-274 29-133 (197)
411 PRK05557 fabG 3-ketoacyl-(acyl 95.6 0.25 5.5E-06 41.7 12.0 75 180-254 4-93 (248)
412 PF02670 DXP_reductoisom: 1-de 95.6 0.31 6.7E-06 37.4 10.9 90 184-273 1-119 (129)
413 TIGR02622 CDP_4_6_dhtase CDP-g 95.6 0.065 1.4E-06 48.4 8.6 75 180-254 3-85 (349)
414 PLN02780 ketoreductase/ oxidor 95.6 0.07 1.5E-06 47.8 8.7 44 180-223 52-96 (320)
415 PRK14967 putative methyltransf 95.6 0.26 5.7E-06 41.5 11.8 94 178-275 34-159 (223)
416 PRK10669 putative cation:proto 95.6 0.098 2.1E-06 50.6 10.2 92 182-274 418-514 (558)
417 COG4122 Predicted O-methyltran 95.6 0.19 4E-06 42.3 10.5 98 179-277 58-168 (219)
418 TIGR01532 E4PD_g-proteo D-eryt 95.6 0.11 2.4E-06 46.5 9.7 94 183-277 1-122 (325)
419 PRK15181 Vi polysaccharide bio 95.6 0.086 1.9E-06 47.6 9.3 86 167-253 2-99 (348)
420 PRK05690 molybdopterin biosynt 95.6 0.12 2.7E-06 44.3 9.7 90 180-269 31-147 (245)
421 PRK05447 1-deoxy-D-xylulose 5- 95.6 0.17 3.6E-06 46.1 10.8 92 182-273 2-120 (385)
422 cd01079 NAD_bind_m-THF_DH NAD 95.6 0.11 2.3E-06 42.7 8.7 114 160-277 32-158 (197)
423 PRK06398 aldose dehydrogenase; 95.6 0.053 1.1E-06 46.7 7.5 70 180-254 5-82 (258)
424 PRK07417 arogenate dehydrogena 95.6 0.12 2.5E-06 45.3 9.8 89 183-277 2-93 (279)
425 PF01408 GFO_IDH_MocA: Oxidore 95.6 0.34 7.4E-06 36.2 11.1 90 183-277 2-94 (120)
426 PRK05479 ketol-acid reductoiso 95.6 0.11 2.4E-06 46.4 9.6 87 179-273 15-106 (330)
427 TIGR00438 rrmJ cell division p 95.6 0.26 5.7E-06 40.3 11.3 99 174-277 26-148 (188)
428 PLN02819 lysine-ketoglutarate 95.6 0.15 3.3E-06 52.4 11.6 95 180-274 568-678 (1042)
429 PRK08655 prephenate dehydrogen 95.5 0.11 2.3E-06 48.7 9.8 89 183-277 2-94 (437)
430 cd05211 NAD_bind_Glu_Leu_Phe_V 95.5 0.21 4.6E-06 42.0 10.8 37 179-215 21-57 (217)
431 TIGR03206 benzo_BadH 2-hydroxy 95.5 0.1 2.2E-06 44.3 9.2 74 180-253 2-89 (250)
432 PRK08945 putative oxoacyl-(acy 95.5 0.092 2E-06 44.7 8.8 76 179-254 10-102 (247)
433 PLN02657 3,8-divinyl protochlo 95.5 0.096 2.1E-06 48.2 9.5 99 179-277 58-183 (390)
434 TIGR01963 PHB_DH 3-hydroxybuty 95.5 0.091 2E-06 44.8 8.8 74 181-254 1-88 (255)
435 PRK06823 ornithine cyclodeamin 95.5 0.32 6.9E-06 43.4 12.4 108 174-287 122-236 (315)
436 PRK07370 enoyl-(acyl carrier p 95.5 0.1 2.2E-06 45.0 9.1 98 180-277 5-149 (258)
437 COG1052 LdhA Lactate dehydroge 95.5 0.085 1.8E-06 47.2 8.7 88 179-275 144-236 (324)
438 PLN02520 bifunctional 3-dehydr 95.5 0.077 1.7E-06 50.9 9.0 94 180-276 378-476 (529)
439 PRK07775 short chain dehydroge 95.5 0.15 3.3E-06 44.2 10.3 75 180-254 9-97 (274)
440 PRK06114 short chain dehydroge 95.5 0.17 3.8E-06 43.3 10.5 75 180-254 7-96 (254)
441 PRK08219 short chain dehydroge 95.5 0.11 2.3E-06 43.5 9.0 72 182-254 4-81 (227)
442 PRK06953 short chain dehydroge 95.5 0.12 2.5E-06 43.4 9.2 72 182-254 2-80 (222)
443 PRK05565 fabG 3-ketoacyl-(acyl 95.5 0.073 1.6E-06 45.1 8.0 74 181-254 5-93 (247)
444 PRK03659 glutathione-regulated 95.5 0.11 2.3E-06 50.8 10.0 92 182-274 401-497 (601)
445 PRK08303 short chain dehydroge 95.5 0.1 2.2E-06 46.4 9.1 74 180-253 7-105 (305)
446 KOG1207 Diacetyl reductase/L-x 95.5 0.061 1.3E-06 43.1 6.7 46 180-225 6-52 (245)
447 PTZ00098 phosphoethanolamine N 95.5 0.13 2.8E-06 44.6 9.6 105 171-277 44-158 (263)
448 PRK12384 sorbitol-6-phosphate 95.4 0.15 3.3E-06 43.7 10.0 74 181-254 2-91 (259)
449 PLN02476 O-methyltransferase 95.4 0.27 5.8E-06 43.0 11.3 99 178-277 116-230 (278)
450 PRK05597 molybdopterin biosynt 95.4 0.12 2.6E-06 47.0 9.6 77 180-256 27-130 (355)
451 PRK13302 putative L-aspartate 95.4 0.14 3E-06 44.7 9.6 87 182-273 7-96 (271)
452 PRK08264 short chain dehydroge 95.4 0.13 2.8E-06 43.5 9.2 71 180-254 5-83 (238)
453 PRK14173 bifunctional 5,10-met 95.4 0.14 3.1E-06 44.7 9.5 95 160-277 134-229 (287)
454 COG0334 GdhA Glutamate dehydro 95.4 0.24 5.2E-06 45.2 11.2 129 154-287 181-349 (411)
455 COG1179 Dinucleotide-utilizing 95.4 0.12 2.6E-06 43.7 8.5 98 180-277 29-155 (263)
456 PRK05650 short chain dehydroge 95.4 0.089 1.9E-06 45.5 8.3 72 183-254 2-87 (270)
457 PRK14169 bifunctional 5,10-met 95.4 0.16 3.5E-06 44.3 9.7 95 160-277 135-230 (282)
458 PRK05653 fabG 3-ketoacyl-(acyl 95.4 0.11 2.4E-06 43.8 8.8 75 180-254 4-92 (246)
459 PRK11880 pyrroline-5-carboxyla 95.4 0.11 2.5E-06 45.0 9.0 78 183-267 4-84 (267)
460 PLN02516 methylenetetrahydrofo 95.4 0.17 3.8E-06 44.4 9.9 96 159-277 145-241 (299)
461 smart00846 Gp_dh_N Glyceraldeh 95.4 0.24 5.2E-06 39.1 9.9 95 183-277 2-120 (149)
462 PRK08328 hypothetical protein; 95.4 0.16 3.4E-06 43.3 9.5 83 180-263 26-136 (231)
463 PLN02986 cinnamyl-alcohol dehy 95.4 0.094 2E-06 46.7 8.6 75 180-254 4-87 (322)
464 PRK14106 murD UDP-N-acetylmura 95.4 0.1 2.2E-06 48.9 9.2 71 180-255 4-79 (450)
465 PRK00312 pcm protein-L-isoaspa 95.3 0.17 3.6E-06 42.3 9.6 95 177-274 75-174 (212)
466 COG2519 GCD14 tRNA(1-methylade 95.3 0.22 4.8E-06 42.5 10.1 99 177-277 91-197 (256)
467 PRK08226 short chain dehydroge 95.3 0.16 3.4E-06 43.7 9.7 75 180-254 5-92 (263)
468 PRK00141 murD UDP-N-acetylmura 95.3 0.13 2.9E-06 48.6 9.9 72 179-254 13-84 (473)
469 PRK08063 enoyl-(acyl carrier p 95.3 0.11 2.5E-06 44.1 8.8 75 180-254 3-92 (250)
470 PRK14186 bifunctional 5,10-met 95.3 0.17 3.6E-06 44.6 9.7 95 160-277 137-232 (297)
471 PRK08628 short chain dehydroge 95.3 0.15 3.3E-06 43.6 9.6 75 180-254 6-93 (258)
472 PRK09135 pteridine reductase; 95.3 0.15 3.2E-06 43.3 9.4 75 180-254 5-95 (249)
473 PRK08416 7-alpha-hydroxysteroi 95.3 0.12 2.6E-06 44.5 8.9 74 180-253 7-96 (260)
474 PLN02730 enoyl-[acyl-carrier-p 95.3 0.22 4.7E-06 44.2 10.6 41 179-220 7-50 (303)
475 PRK14166 bifunctional 5,10-met 95.3 0.18 3.8E-06 44.1 9.7 96 159-277 135-231 (282)
476 PRK10258 biotin biosynthesis p 95.3 0.18 3.9E-06 43.3 9.9 94 179-275 41-140 (251)
477 PRK07856 short chain dehydroge 95.3 0.096 2.1E-06 44.8 8.1 72 180-254 5-85 (252)
478 PRK06077 fabG 3-ketoacyl-(acyl 95.3 0.54 1.2E-05 39.9 12.8 98 180-277 5-142 (252)
479 PRK01683 trans-aconitate 2-met 95.3 0.31 6.7E-06 42.0 11.3 94 178-274 29-129 (258)
480 PRK13581 D-3-phosphoglycerate 95.3 0.16 3.5E-06 48.7 10.2 89 180-277 139-232 (526)
481 PRK01438 murD UDP-N-acetylmura 95.2 0.15 3.4E-06 48.2 10.1 71 179-255 14-89 (480)
482 COG1712 Predicted dinucleotide 95.2 0.12 2.6E-06 43.2 8.0 81 183-269 2-85 (255)
483 PRK14183 bifunctional 5,10-met 95.2 0.19 4.1E-06 43.8 9.7 95 160-277 136-231 (281)
484 cd00755 YgdL_like Family of ac 95.2 0.16 3.5E-06 43.1 9.2 33 181-213 11-44 (231)
485 PRK08261 fabG 3-ketoacyl-(acyl 95.2 0.028 6E-07 52.7 4.9 92 175-277 28-125 (450)
486 cd00757 ThiF_MoeB_HesA_family 95.2 0.15 3.2E-06 43.3 8.9 89 180-268 20-135 (228)
487 PRK14184 bifunctional 5,10-met 95.2 0.17 3.7E-06 44.2 9.4 95 160-277 136-235 (286)
488 TIGR00477 tehB tellurite resis 95.2 0.22 4.7E-06 41.1 9.7 93 179-274 29-132 (195)
489 TIGR02415 23BDH acetoin reduct 95.2 0.14 3E-06 43.7 8.8 73 182-254 1-87 (254)
490 TIGR00872 gnd_rel 6-phosphoglu 95.2 0.28 6.1E-06 43.4 11.0 88 183-275 2-93 (298)
491 PRK08220 2,3-dihydroxybenzoate 95.2 0.49 1.1E-05 40.2 12.3 69 180-254 7-86 (252)
492 PRK14187 bifunctional 5,10-met 95.2 0.2 4.2E-06 44.0 9.6 95 160-277 139-234 (294)
493 PRK05600 thiamine biosynthesis 95.2 0.13 2.8E-06 47.0 9.0 77 180-256 40-143 (370)
494 PRK05599 hypothetical protein; 95.2 0.13 2.8E-06 44.0 8.6 71 183-254 2-87 (246)
495 PLN02490 MPBQ/MSBQ methyltrans 95.2 0.22 4.7E-06 44.9 10.2 96 179-276 112-216 (340)
496 PRK14170 bifunctional 5,10-met 95.2 0.19 4E-06 43.9 9.4 95 160-277 136-231 (284)
497 TIGR01505 tartro_sem_red 2-hyd 95.2 0.13 2.7E-06 45.4 8.6 67 183-256 1-67 (291)
498 PRK15116 sulfur acceptor prote 95.2 0.25 5.4E-06 42.9 10.2 34 180-213 29-63 (268)
499 PRK15409 bifunctional glyoxyla 95.2 0.12 2.6E-06 46.3 8.6 87 180-275 144-236 (323)
500 TIGR01829 AcAcCoA_reduct aceto 95.2 0.15 3.3E-06 43.0 8.9 73 182-254 1-88 (242)
No 1
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=100.00 E-value=6.3e-58 Score=399.44 Aligned_cols=282 Identities=39% Similarity=0.625 Sum_probs=257.8
Q ss_pred cccceEEeeeCCCCcccceeeecCCCCCCcEEEEEceeecccchhhhhccCCCCCCCCccccccccEEEEEecCCCCCcc
Q 022313 7 SKDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFK 86 (299)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~ 86 (299)
+++++++.+....+++++.+++.|+|.++||+|+|+++|+|++|+|.++|.++...+|+++|||.+|+|+++|++|++|+
T Consensus 1 ~~~mkA~~~~~~~~pl~i~e~~~p~p~~~eVlI~v~~~GVChsDlH~~~G~~~~~~~P~ipGHEivG~V~~vG~~V~~~k 80 (339)
T COG1064 1 MMTMKAAVLKKFGQPLEIEEVPVPEPGPGEVLIKVEACGVCHTDLHVAKGDWPVPKLPLIPGHEIVGTVVEVGEGVTGLK 80 (339)
T ss_pred CcceEEEEEccCCCCceEEeccCCCCCCCeEEEEEEEEeecchhhhhhcCCCCCCCCCccCCcceEEEEEEecCCCccCC
Confidence 35667777766667799999999999999999999999999999999999999888999999999999999999999999
Q ss_pred cCCEEEEeccccCCCCCccccCCCCccccccccccccccCCCCccCCcceeeEEeecceEEEcCCCCCcccccccchhhH
Q 022313 87 VGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGI 166 (299)
Q Consensus 87 ~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ 166 (299)
+||+|.+.....+|++|++|++|.+++|++.... |...+|+|+||+++|++.++++|++++++.||++.|+..
T Consensus 81 ~GDrVgV~~~~~~Cg~C~~C~~G~E~~C~~~~~~-------gy~~~GGyaeyv~v~~~~~~~iP~~~d~~~aApllCaGi 153 (339)
T COG1064 81 VGDRVGVGWLVISCGECEYCRSGNENLCPNQKIT-------GYTTDGGYAEYVVVPARYVVKIPEGLDLAEAAPLLCAGI 153 (339)
T ss_pred CCCEEEecCccCCCCCCccccCcccccCCCcccc-------ceeecCcceeEEEEchHHeEECCCCCChhhhhhhhcCee
Confidence 9999999777789999999999999999986544 445789999999999999999999999999999999999
Q ss_pred HHHHHhhhccCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEEeCCCHHHHHHhcCCcc
Q 022313 167 TVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLD 246 (299)
Q Consensus 167 ta~~al~~~~~~~~g~~vlI~G~g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d 246 (299)
|.|++++.... +||++|+|.|.|++|.+|+|+|+.+|++|+++++++++.+.+ +++|++++++..+.+..+.+.+.+|
T Consensus 154 T~y~alk~~~~-~pG~~V~I~G~GGlGh~avQ~Aka~ga~Via~~~~~~K~e~a-~~lGAd~~i~~~~~~~~~~~~~~~d 231 (339)
T COG1064 154 TTYRALKKANV-KPGKWVAVVGAGGLGHMAVQYAKAMGAEVIAITRSEEKLELA-KKLGADHVINSSDSDALEAVKEIAD 231 (339)
T ss_pred eEeeehhhcCC-CCCCEEEEECCcHHHHHHHHHHHHcCCeEEEEeCChHHHHHH-HHhCCcEEEEcCCchhhHHhHhhCc
Confidence 99999988555 999999999999999999999999999999999999999998 7999999999877666666656699
Q ss_pred EEEEcCCCchhHHHHHHhcccCcEEEEEcCC---CceeeChhhhhcCCeeeeeec
Q 022313 247 FIIDTASGDHPFDAYMSLLKVAGVYVLVGFP---SKVKFSPASLNIGNAPLFRFK 298 (299)
Q Consensus 247 ~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~---~~~~~~~~~l~~~~~~~~g~~ 298 (299)
+++++++ ..+++.+++.|+++|+++++|.+ ...+++...++.+++++.|-.
T Consensus 232 ~ii~tv~-~~~~~~~l~~l~~~G~~v~vG~~~~~~~~~~~~~~li~~~~~i~GS~ 285 (339)
T COG1064 232 AIIDTVG-PATLEPSLKALRRGGTLVLVGLPGGGPIPLLPAFLLILKEISIVGSL 285 (339)
T ss_pred EEEECCC-hhhHHHHHHHHhcCCEEEEECCCCCcccCCCCHHHhhhcCeEEEEEe
Confidence 9999999 77799999999999999999998 335588889999999999853
No 2
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=7.9e-55 Score=368.56 Aligned_cols=296 Identities=51% Similarity=0.864 Sum_probs=273.5
Q ss_pred CCcccccccceEEeeeCCCCccc--ceeeecCCCCCCcEEEEEceeecccchhhhhccCCCCCCCCccccccccEEEEEe
Q 022313 1 MTSETASKDCLGWAARDPSGVLS--PYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEV 78 (299)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~p~~~~~evlv~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~v 78 (299)
|.+|..+.++.+|++...++.+. .++++.|++.++||+|+|+++|||++|+|.+.|.++..++|.++|||.+|+|+++
T Consensus 1 ~~~~~~p~k~~g~~~~~~~G~l~p~~~~~~~~~~g~~dv~vkI~~cGIChsDlH~~~gdwg~s~~PlV~GHEiaG~Vvkv 80 (360)
T KOG0023|consen 1 MSSMSIPEKQFGWAARDPSGVLSPEVFSFPVREPGENDVLVKIEYCGVCHSDLHAWKGDWGLSKYPLVPGHEIAGVVVKV 80 (360)
T ss_pred CCcccCchhhEEEEEECCCCCCCcceeEcCCCCCCCCcEEEEEEEEeccchhHHHhhccCCcccCCccCCceeeEEEEEE
Confidence 67889999999999998888555 4999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCcccCCEEEEeccccCCCCCccccCCCCccccccccccccccCCCCccCCcceeeEEeecceEEEcCCCCCcccc
Q 022313 79 GHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALA 158 (299)
Q Consensus 79 G~~v~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~a 158 (299)
|++|++|++||+|.+.....+|++|++|.++.+++|++.-..+.+...||+.+.|+|++|+++++..+++||++++++.|
T Consensus 81 Gs~V~~~kiGD~vGVg~~~~sC~~CE~C~~~~E~yCpk~~~t~~g~~~DGt~~~ggf~~~~~v~~~~a~kIP~~~pl~~a 160 (360)
T KOG0023|consen 81 GSNVTGFKIGDRVGVGWLNGSCLSCEYCKSGNENYCPKMHFTYNGVYHDGTITQGGFQEYAVVDEVFAIKIPENLPLASA 160 (360)
T ss_pred CCCcccccccCeeeeeEEeccccCccccccCCcccCCceeEeccccccCCCCccCccceeEEEeeeeEEECCCCCChhhc
Confidence 99999999999999999999999999999999999999888889999999999999999999999999999999999999
Q ss_pred cccchhhHHHHHHhhhccCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEEeCC-CHHH
Q 022313 159 APLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSS-DLEQ 237 (299)
Q Consensus 159 a~~~~~~~ta~~al~~~~~~~~g~~vlI~G~g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~-~~~~ 237 (299)
|++.|+..|+|.+|....- .||+++-|.|+|++|.+++|+|+++|.+|+++++++.+.+++.+.+|++.+++.. +++.
T Consensus 161 APlLCaGITvYspLk~~g~-~pG~~vgI~GlGGLGh~aVq~AKAMG~rV~vis~~~~kkeea~~~LGAd~fv~~~~d~d~ 239 (360)
T KOG0023|consen 161 APLLCAGITVYSPLKRSGL-GPGKWVGIVGLGGLGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSLGADVFVDSTEDPDI 239 (360)
T ss_pred cchhhcceEEeehhHHcCC-CCCcEEEEecCcccchHHHHHHHHhCcEEEEEeCCchhHHHHHHhcCcceeEEecCCHHH
Confidence 9999999999999988877 8999999999977999999999999999999999998888888899999999877 7777
Q ss_pred HHHhcCCccEEEEcCC--CchhHHHHHHhcccCcEEEEEcCC-CceeeChhhhhcCCeeeeee
Q 022313 238 MKALGKSLDFIIDTAS--GDHPFDAYMSLLKVAGVYVLVGFP-SKVKFSPASLNIGNAPLFRF 297 (299)
Q Consensus 238 ~~~~~~~~d~v~d~~g--~~~~~~~~~~~l~~~G~~v~~g~~-~~~~~~~~~l~~~~~~~~g~ 297 (299)
++++.+-.|.+++++. ....++.++.+++.+|+++++|.+ .+..+++..+..+++.|.|.
T Consensus 240 ~~~~~~~~dg~~~~v~~~a~~~~~~~~~~lk~~Gt~V~vg~p~~~~~~~~~~lil~~~~I~GS 302 (360)
T KOG0023|consen 240 MKAIMKTTDGGIDTVSNLAEHALEPLLGLLKVNGTLVLVGLPEKPLKLDTFPLILGRKSIKGS 302 (360)
T ss_pred HHHHHHhhcCcceeeeeccccchHHHHHHhhcCCEEEEEeCcCCcccccchhhhcccEEEEee
Confidence 7777655555555555 445599999999999999999999 79999999999999999874
No 3
>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]
Probab=100.00 E-value=1e-48 Score=334.94 Aligned_cols=286 Identities=27% Similarity=0.390 Sum_probs=253.1
Q ss_pred ccceEEeeeCCCCcccceeeecCCCCCCcEEEEEceeecccchhhhhccCCCCCCCCccccccccEEEEEecCCCCCccc
Q 022313 8 KDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKV 87 (299)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~ 87 (299)
|++++....+..++|+++++.+++|+++||+||+.++|+||+|.+.+.|..+.. +|.+||||++|+|++||++|+.+++
T Consensus 1 mk~~aAV~~~~~~Pl~i~ei~l~~P~~gEVlVri~AtGVCHTD~~~~~G~~p~~-~P~vLGHEgAGiVe~VG~gVt~vkp 79 (366)
T COG1062 1 MKTRAAVAREAGKPLEIEEVDLDPPRAGEVLVRITATGVCHTDAHTLSGDDPEG-FPAVLGHEGAGIVEAVGEGVTSVKP 79 (366)
T ss_pred CCceEeeeecCCCCeEEEEEecCCCCCCeEEEEEEEeeccccchhhhcCCCCCC-CceecccccccEEEEecCCccccCC
Confidence 567777787889999999999999999999999999999999999999988855 9999999999999999999999999
Q ss_pred CCEEEEeccccCCCCCccccCCCCccccccccc-cccccCCCCc-------------cCCcceeeEEeecceEEEcCCCC
Q 022313 88 GDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYT-FNAIDADGTI-------------TKGGYSSYIVVHERYCYKIANDY 153 (299)
Q Consensus 88 Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~-~~~~~~~g~~-------------~~g~~~~~~~~~~~~~~~~p~~~ 153 (299)
||+|+ ..+..+||+|.+|+++.++.|...+-. .-|...||.. -.++|+||..+++.++++++++.
T Consensus 80 GDhVI-~~f~p~CG~C~~C~sGk~nlC~~~~~~~~kG~m~dGttrls~~~~~~~h~lG~stFa~y~vv~~~s~vki~~~~ 158 (366)
T COG1062 80 GDHVI-LLFTPECGQCKFCLSGKPNLCEAIRATQGKGTMPDGTTRLSGNGVPVYHYLGCSTFAEYTVVHEISLVKIDPDA 158 (366)
T ss_pred CCEEE-EcccCCCCCCchhhCCCcccccchhhhcccccccCCceeeecCCcceeeeeccccchhheeecccceEECCCCC
Confidence 99994 566779999999999999999964222 2233333321 13599999999999999999999
Q ss_pred CcccccccchhhHHHHHHhhhccCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCchHHHHHHHhcCCCEEEeC
Q 022313 154 PLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKFVVS 232 (299)
Q Consensus 154 ~~~~aa~~~~~~~ta~~al~~~~~~~~g~~vlI~G~g~~G~~a~~~a~~~g~-~v~~~~~~~~~~~~~~~~~g~~~v~~~ 232 (299)
+++.++.+.|...|.+.++.+...+++|++|.|+|.|++|++++|-|+..|+ ++++++.++++++++ ++||+++++|.
T Consensus 159 p~~~a~llGCgV~TG~Gav~nta~v~~G~tvaV~GlGgVGlaaI~gA~~agA~~IiAvD~~~~Kl~~A-~~fGAT~~vn~ 237 (366)
T COG1062 159 PLEKACLLGCGVTTGIGAVVNTAKVEPGDTVAVFGLGGVGLAAIQGAKAAGAGRIIAVDINPEKLELA-KKFGATHFVNP 237 (366)
T ss_pred CccceEEEeeeeccChHHhhhcccCCCCCeEEEEeccHhHHHHHHHHHHcCCceEEEEeCCHHHHHHH-HhcCCceeecc
Confidence 9999999999999999999999999999999999999999999999999999 999999999999999 79999999999
Q ss_pred CCHH----HHHHhcC-CccEEEEcCCCchhHHHHHHhcccCcEEEEEcCC---CceeeChhhhhcCCeeeeee
Q 022313 233 SDLE----QMKALGK-SLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP---SKVKFSPASLNIGNAPLFRF 297 (299)
Q Consensus 233 ~~~~----~~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~---~~~~~~~~~l~~~~~~~~g~ 297 (299)
.+.. .+.++++ ++|++|||+|+..+++.++.+..++|+.+.+|.. ...++++.+|... .+++|-
T Consensus 238 ~~~~~vv~~i~~~T~gG~d~~~e~~G~~~~~~~al~~~~~~G~~v~iGv~~~~~~i~~~~~~lv~g-r~~~Gs 309 (366)
T COG1062 238 KEVDDVVEAIVELTDGGADYAFECVGNVEVMRQALEATHRGGTSVIIGVAGAGQEISTRPFQLVTG-RVWKGS 309 (366)
T ss_pred hhhhhHHHHHHHhcCCCCCEEEEccCCHHHHHHHHHHHhcCCeEEEEecCCCCceeecChHHeecc-ceEEEE
Confidence 8653 3445554 9999999999999999999999999999999988 5667888888866 666663
No 4
>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=6.6e-49 Score=333.40 Aligned_cols=276 Identities=26% Similarity=0.424 Sum_probs=244.2
Q ss_pred ceEEeeeCCCCcccceeeecCCC-CCCcEEEEEceeecccchhhhhccCCCC---CCCCccccccccEEEEEecCCCCCc
Q 022313 10 CLGWAARDPSGVLSPYSFNRRAV-GSDDVSITITHCGVCYADVIWTRNKHGD---SKYPLVPGHEIVGIVKEVGHNVSRF 85 (299)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~p~~-~~~evlv~v~~~~i~~~D~~~~~g~~~~---~~~p~~lG~e~~G~V~~vG~~v~~~ 85 (299)
+.++.+ ..++++++.+.+.|++ .|+||+|+++++|||+||+|++.+.... .+.|.++|||.+|+|+++|+.|+++
T Consensus 5 ~~A~vl-~g~~di~i~~~p~p~i~~p~eVlv~i~a~GICGSDvHy~~~G~ig~~v~k~PmvlGHEssGiV~evG~~Vk~L 83 (354)
T KOG0024|consen 5 NLALVL-RGKGDIRIEQRPIPTITDPDEVLVAIKAVGICGSDVHYYTHGRIGDFVVKKPMVLGHESSGIVEEVGDEVKHL 83 (354)
T ss_pred cceeEE-EccCceeEeeCCCCCCCCCCEEEEEeeeEEecCccchhhccCCcCccccccccccccccccchhhhccccccc
Confidence 445555 4778899999999987 9999999999999999999999765432 3579999999999999999999999
Q ss_pred ccCCEEEEeccccCCCCCccccCCCCccccccccccccccCCCCccCCcceeeEEeecceEEEcCCCCCcccccccchhh
Q 022313 86 KVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAG 165 (299)
Q Consensus 86 ~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~ 165 (299)
++||||++.|.. +|+.|+.|++|+|+.|++..|.-.+ ..+|++++|+..++++|+++|+++|++++|.+. ++
T Consensus 84 kVGDrVaiEpg~-~c~~cd~CK~GrYNlCp~m~f~atp------p~~G~la~y~~~~~dfc~KLPd~vs~eeGAl~e-PL 155 (354)
T KOG0024|consen 84 KVGDRVAIEPGL-PCRDCDFCKEGRYNLCPHMVFCATP------PVDGTLAEYYVHPADFCYKLPDNVSFEEGALIE-PL 155 (354)
T ss_pred ccCCeEEecCCC-ccccchhhhCcccccCCccccccCC------CcCCceEEEEEechHheeeCCCCCchhhccccc-ch
Confidence 999999998886 9999999999999999998776332 357999999999999999999999999988665 69
Q ss_pred HHHHHHhhhccCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCchHHHHHHHhcCCCEEEeCCCHH---HHHHh
Q 022313 166 ITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKFVVSSDLE---QMKAL 241 (299)
Q Consensus 166 ~ta~~al~~~~~~~~g~~vlI~G~g~~G~~a~~~a~~~g~-~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~---~~~~~ 241 (299)
+.+|||.++... ++|++|||+|+|++|+++...|+.+|+ +|++++..++|++.+ ++||++.+.+..... .+.+.
T Consensus 156 sV~~HAcr~~~v-k~Gs~vLV~GAGPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~A-k~~Ga~~~~~~~~~~~~~~~~~~ 233 (354)
T KOG0024|consen 156 SVGVHACRRAGV-KKGSKVLVLGAGPIGLLTGLVAKAMGASDVVITDLVANRLELA-KKFGATVTDPSSHKSSPQELAEL 233 (354)
T ss_pred hhhhhhhhhcCc-ccCCeEEEECCcHHHHHHHHHHHHcCCCcEEEeecCHHHHHHH-HHhCCeEEeeccccccHHHHHHH
Confidence 999999987766 999999999999999999999999999 999999999999999 579999998766532 22222
Q ss_pred -----c-CCccEEEEcCCCchhHHHHHHhcccCcEEEEEcCC-CceeeChhhhhcCCeeeee
Q 022313 242 -----G-KSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP-SKVKFSPASLNIGNAPLFR 296 (299)
Q Consensus 242 -----~-~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~-~~~~~~~~~l~~~~~~~~g 296 (299)
+ ..+|++|||+|...+++.++.+++.+|+++++|+- ...+||+.....|+++++|
T Consensus 234 v~~~~g~~~~d~~~dCsG~~~~~~aai~a~r~gGt~vlvg~g~~~~~fpi~~v~~kE~~~~g 295 (354)
T KOG0024|consen 234 VEKALGKKQPDVTFDCSGAEVTIRAAIKATRSGGTVVLVGMGAEEIQFPIIDVALKEVDLRG 295 (354)
T ss_pred HHhhccccCCCeEEEccCchHHHHHHHHHhccCCEEEEeccCCCccccChhhhhhheeeeee
Confidence 2 45999999999999999999999999999999999 8999999999999999987
No 5
>PLN02586 probable cinnamyl alcohol dehydrogenase
Probab=100.00 E-value=5.9e-47 Score=343.59 Aligned_cols=294 Identities=50% Similarity=0.898 Sum_probs=253.9
Q ss_pred cccccceEEeeeCCCCcccceeeecCCCCCCcEEEEEceeecccchhhhhccCCCCCCCCccccccccEEEEEecCCCCC
Q 022313 5 TASKDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSR 84 (299)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~ 84 (299)
+.+||+.++...+.++.++..+++.|++.++||+|||+++++|++|++.+.|.++...+|.++|||++|+|+++|+++++
T Consensus 8 ~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~gic~sD~~~~~g~~~~~~~p~i~GhE~~G~V~~vG~~v~~ 87 (360)
T PLN02586 8 EHPQKAFGWAARDPSGVLSPFHFSRRENGDEDVTVKILYCGVCHSDLHTIKNEWGFTRYPIVPGHEIVGIVTKLGKNVKK 87 (360)
T ss_pred hchhheeEEEecCCCCCceEEeecCCCCCCCeEEEEEEEecCChhhHhhhcCCcCCCCCCccCCcceeEEEEEECCCCCc
Confidence 67899999999888888999999999999999999999999999999998876554467899999999999999999999
Q ss_pred cccCCEEEEeccccCCCCCccccCCCCccccccccccccccCCCCccCCcceeeEEeecceEEEcCCCCCcccccccchh
Q 022313 85 FKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCA 164 (299)
Q Consensus 85 ~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~ 164 (299)
|++||+|.+.+...+|+.|.+|+.+.++.|++..+.+.....+|....|+|+||+.+|++.++++|+++++++++++++.
T Consensus 88 ~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls~~~aa~l~~~ 167 (360)
T PLN02586 88 FKEGDRVGVGVIVGSCKSCESCDQDLENYCPKMIFTYNSIGHDGTKNYGGYSDMIVVDQHFVLRFPDNLPLDAGAPLLCA 167 (360)
T ss_pred cCCCCEEEEccccCcCCCCccccCCCcccCCCccccccccccCCCcCCCccceEEEEchHHeeeCCCCCCHHHhhhhhcc
Confidence 99999997666556899999999999999998654322111123334699999999999999999999999999999999
Q ss_pred hHHHHHHhhhccCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEEeCCCHHHHHHhcCC
Q 022313 165 GITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKS 244 (299)
Q Consensus 165 ~~ta~~al~~~~~~~~g~~vlI~G~g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~ 244 (299)
+.|+|+++.....++++++|+|.|+|++|++++|+|+..|++|++++.++++..++.+++|++++++..+.+.+.+..++
T Consensus 168 ~~ta~~al~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~~~Ga~~vi~~~~~~~~~~~~~~ 247 (360)
T PLN02586 168 GITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISSSSNKEDEAINRLGADSFLVSTDPEKMKAAIGT 247 (360)
T ss_pred hHHHHHHHHHhcccCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHHhCCCcEEEcCCCHHHHHhhcCC
Confidence 99999998776666899999999999999999999999999999888887776666678999999987765555555568
Q ss_pred ccEEEEcCCCchhHHHHHHhcccCcEEEEEcCC-CceeeChhhhhcCCeeeeeec
Q 022313 245 LDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP-SKVKFSPASLNIGNAPLFRFK 298 (299)
Q Consensus 245 ~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~-~~~~~~~~~l~~~~~~~~g~~ 298 (299)
+|++||++|....+..++++++++|+++.+|.. ....+++..++.+++.+.|+.
T Consensus 248 ~D~vid~~g~~~~~~~~~~~l~~~G~iv~vG~~~~~~~~~~~~~~~~~~~i~g~~ 302 (360)
T PLN02586 248 MDYIIDTVSAVHALGPLLGLLKVNGKLITLGLPEKPLELPIFPLVLGRKLVGGSD 302 (360)
T ss_pred CCEEEECCCCHHHHHHHHHHhcCCcEEEEeCCCCCCCccCHHHHHhCCeEEEEcC
Confidence 999999999876688999999999999999987 566788888888998888763
No 6
>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.5e-46 Score=315.56 Aligned_cols=285 Identities=26% Similarity=0.411 Sum_probs=255.1
Q ss_pred cccccceEEeeeCCCCcccceeeecCCCCCCcEEEEEceeecccchhhhhccCCCCCCCCccccccccEEEEEecCCCCC
Q 022313 5 TASKDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSR 84 (299)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~ 84 (299)
.+..++++.+.....++|.++|+..++|+.+||+||+.++++||+|.+.+.|..+...+|.+||||++|+|+++|+.|++
T Consensus 3 gkvI~CKAAV~w~a~~PL~IEei~V~pPka~EVRIKI~~t~vCHTD~~~~~g~~~~~~fP~IlGHEaaGIVESvGegV~~ 82 (375)
T KOG0022|consen 3 GKVITCKAAVAWEAGKPLVIEEIEVAPPKAHEVRIKILATGVCHTDAYVWSGKDPEGLFPVILGHEAAGIVESVGEGVTT 82 (375)
T ss_pred CCceEEeEeeeccCCCCeeEEEEEeCCCCCceEEEEEEEEeeccccceeecCCCccccCceEecccceeEEEEecCCccc
Confidence 46778888888888899999999999999999999999999999999999998776788999999999999999999999
Q ss_pred cccCCEEEEeccccCCCCCccccCCCCcccccccccc--ccccCCCCcc-------------CCcceeeEEeecceEEEc
Q 022313 85 FKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTF--NAIDADGTIT-------------KGGYSSYIVVHERYCYKI 149 (299)
Q Consensus 85 ~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~--~~~~~~g~~~-------------~g~~~~~~~~~~~~~~~~ 149 (299)
+++||+| +..+...|++|.+|+++.+++|...+... .++..||..+ ..+|+||.+++...++++
T Consensus 83 vk~GD~V-iplf~p~CgeCk~C~s~ktNlC~~~~~~~~~~~~~~DgtSRF~~~gk~iyHfmg~StFsEYTVv~~~~v~kI 161 (375)
T KOG0022|consen 83 VKPGDHV-IPLFTPQCGECKFCKSPKTNLCEKFRADNGKGGMPYDGTSRFTCKGKPIYHFMGTSTFSEYTVVDDISVAKI 161 (375)
T ss_pred cCCCCEE-eeccccCCCCcccccCCCCChhhhhcccccccccccCCceeeeeCCCceEEecccccceeEEEeecceeEec
Confidence 9999999 45677899999999999999999975543 3344455332 359999999999999999
Q ss_pred CCCCCcccccccchhhHHHHHHhhhccCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCchHHHHHHHhcCCCE
Q 022313 150 ANDYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADK 228 (299)
Q Consensus 150 p~~~~~~~aa~~~~~~~ta~~al~~~~~~~~g~~vlI~G~g~~G~~a~~~a~~~g~-~v~~~~~~~~~~~~~~~~~g~~~ 228 (299)
+++.+++.++.+.|.+.|.|.|..+...+++|+++.|+|.|++|+++++-|+..|| ++|.++.++++.+.+ ++||+++
T Consensus 162 d~~aPl~kvcLLgCGvsTG~GAa~~~Akv~~GstvAVfGLG~VGLav~~Gaka~GAsrIIgvDiN~~Kf~~a-k~fGaTe 240 (375)
T KOG0022|consen 162 DPSAPLEKVCLLGCGVSTGYGAAWNTAKVEPGSTVAVFGLGGVGLAVAMGAKAAGASRIIGVDINPDKFEKA-KEFGATE 240 (375)
T ss_pred CCCCChhheeEeeccccccchhhhhhcccCCCCEEEEEecchHHHHHHHhHHhcCcccEEEEecCHHHHHHH-HhcCcce
Confidence 99999999999999999999999889889999999999999999999999999999 999999999999999 7999999
Q ss_pred EEeCCCH-----HHHHHhc-CCccEEEEcCCCchhHHHHHHhcccC-cEEEEEcCC---CceeeChhhhhcCC
Q 022313 229 FVVSSDL-----EQMKALG-KSLDFIIDTASGDHPFDAYMSLLKVA-GVYVLVGFP---SKVKFSPASLNIGN 291 (299)
Q Consensus 229 v~~~~~~-----~~~~~~~-~~~d~v~d~~g~~~~~~~~~~~l~~~-G~~v~~g~~---~~~~~~~~~l~~~~ 291 (299)
++|+.|. +.+.+++ +++|+.|||+|+..++++++.+...+ |+-+.+|.. ...++.+++|+..+
T Consensus 241 ~iNp~d~~~~i~evi~EmTdgGvDysfEc~G~~~~m~~al~s~h~GwG~sv~iGv~~~~~~i~~~p~~l~~GR 313 (375)
T KOG0022|consen 241 FINPKDLKKPIQEVIIEMTDGGVDYSFECIGNVSTMRAALESCHKGWGKSVVIGVAAAGQEISTRPFQLVTGR 313 (375)
T ss_pred ecChhhccccHHHHHHHHhcCCceEEEEecCCHHHHHHHHHHhhcCCCeEEEEEecCCCcccccchhhhcccc
Confidence 9999853 3344554 79999999999999999999999988 999999988 67778888887544
No 7
>PLN02178 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=6.6e-45 Score=331.42 Aligned_cols=291 Identities=49% Similarity=0.873 Sum_probs=245.3
Q ss_pred ccceEEeeeCCCCcccceeeecCCCCCCcEEEEEceeecccchhhhhccCCCCCCCCccccccccEEEEEecCCCCCccc
Q 022313 8 KDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKV 87 (299)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~ 87 (299)
.++.++...+.++.++..+++.|++.++||+|||.++++|++|++.+.|.+....+|.++|||++|+|+++|+++++|++
T Consensus 5 ~~a~~~~~~~~~~~l~~~~~~~p~~~~~eVlVkV~a~gic~sD~~~~~G~~~~~~~p~i~GhE~aG~Vv~vG~~v~~~~v 84 (375)
T PLN02178 5 NKAFGWAANDESGVLSPFHFSRRENGENDVTVKILFCGVCHSDLHTIKNHWGFSRYPIIPGHEIVGIATKVGKNVTKFKE 84 (375)
T ss_pred ceeEEEEEccCCCCceEEeecCCCCCCCeEEEEEEEEcCchHHHHHhcCCCCCCCCCcccCceeeEEEEEECCCCCccCC
Confidence 34566667667778888999999999999999999999999999999886643456889999999999999999999999
Q ss_pred CCEEEEeccccCCCCCccccCCCCccccccccccccccCCCCccCCcceeeEEeecceEEEcCCCCCcccccccchhhHH
Q 022313 88 GDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGIT 167 (299)
Q Consensus 88 Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~t 167 (299)
||+|.+.+...+|+.|.+|+++.++.|++..+........|....|+|+||+.+|++.++++|+++++++++++.+...|
T Consensus 85 GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls~~~aa~l~~~~~t 164 (375)
T PLN02178 85 GDRVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTRNQGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGIT 164 (375)
T ss_pred CCEEEEcCccCCCCCChhHhCcchhcCCCccccccccccCCCcCCCccccEEEEchHHeEECCCCCCHHHcchhhccchH
Confidence 99998666555799999999999999998654321111112234699999999999999999999999999999999999
Q ss_pred HHHHhhhccC-CCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEEeCCCHHHHHHhcCCcc
Q 022313 168 VYTPMMRHKM-NQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLD 246 (299)
Q Consensus 168 a~~al~~~~~-~~~g~~vlI~G~g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d 246 (299)
+|+++..... .+++++|+|.|+|++|++++|+|+..|++|++++.+++++.++++++|++++++..+.+.+.+..+++|
T Consensus 165 a~~al~~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga~Vi~~~~~~~~~~~~a~~lGa~~~i~~~~~~~v~~~~~~~D 244 (375)
T PLN02178 165 VYSPMKYYGMTKESGKRLGVNGLGGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDRLGADSFLVTTDSQKMKEAVGTMD 244 (375)
T ss_pred HHHHHHHhCCCCCCCCEEEEEcccHHHHHHHHHHHHcCCeEEEEeCChHHhHHHHHhCCCcEEEcCcCHHHHHHhhCCCc
Confidence 9999876543 268999999999999999999999999999999887666444447899999998766555555556899
Q ss_pred EEEEcCCCchhHHHHHHhcccCcEEEEEcCC-CceeeChhhhhcCCeeeeeec
Q 022313 247 FIIDTASGDHPFDAYMSLLKVAGVYVLVGFP-SKVKFSPASLNIGNAPLFRFK 298 (299)
Q Consensus 247 ~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~-~~~~~~~~~l~~~~~~~~g~~ 298 (299)
++||++|....+..++++++++|+++.+|.. ....+++..++.|+++++|+.
T Consensus 245 ~vid~~G~~~~~~~~~~~l~~~G~iv~vG~~~~~~~~~~~~~~~~~~~i~g~~ 297 (375)
T PLN02178 245 FIIDTVSAEHALLPLFSLLKVSGKLVALGLPEKPLDLPIFPLVLGRKMVGGSQ 297 (375)
T ss_pred EEEECCCcHHHHHHHHHhhcCCCEEEEEccCCCCCccCHHHHHhCCeEEEEeC
Confidence 9999999886689999999999999999987 566788888999999999864
No 8
>PLN02514 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=1.6e-44 Score=327.45 Aligned_cols=298 Identities=46% Similarity=0.816 Sum_probs=256.2
Q ss_pred CCcccccccceEEeeeCCCCcccceeeecCCCCCCcEEEEEceeecccchhhhhccCCCCCCCCccccccccEEEEEecC
Q 022313 1 MTSETASKDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGH 80 (299)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~ 80 (299)
|.+.+...+++++....+.+.++.++++.|++.++||+|||.++++|++|++.+.|.+.....|.++|||++|+|+++|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVrv~a~gi~~~D~~~~~g~~~~~~~p~i~G~E~~G~Vv~vG~ 80 (357)
T PLN02514 1 MGSLEAEKKTTGWAARDPSGHLSPYTYTLRKTGPEDVVIKVIYCGICHTDLHQIKNDLGMSNYPMVPGHEVVGEVVEVGS 80 (357)
T ss_pred CCccCCCceEEEEEEecCCCCceEEeecCCCCCCCcEEEEEEEeccChHHHHhhcCCcCcCCCCccCCceeeEEEEEECC
Confidence 56667677788888888888899999999999999999999999999999998887665445688999999999999999
Q ss_pred CCCCcccCCEEEEeccccCCCCCccccCCCCccccccccccccccCCCCccCCcceeeEEeecceEEEcCCCCCcccccc
Q 022313 81 NVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAP 160 (299)
Q Consensus 81 ~v~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~ 160 (299)
++++|++||+|.+.+....|+.|.+|+++.++.|.+..+.+.+....|....|+|+||+.+|.+.++++|++++++++++
T Consensus 81 ~v~~~~~Gd~V~~~~~~~~c~~C~~c~~g~~~~c~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~ 160 (357)
T PLN02514 81 DVSKFTVGDIVGVGVIVGCCGECSPCKSDLEQYCNKRIWSYNDVYTDGKPTQGGFASAMVVDQKFVVKIPEGMAPEQAAP 160 (357)
T ss_pred CcccccCCCEEEEcCccccCCCChhHhCCCcccCCCccccccccccCCccCCCccccEEEEchHHeEECCCCCCHHHhhh
Confidence 99999999999866555579999999999999998764322211112333469999999999999999999999999999
Q ss_pred cchhhHHHHHHhhhccCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEEeCCCHHHHHH
Q 022313 161 LLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKA 240 (299)
Q Consensus 161 ~~~~~~ta~~al~~~~~~~~g~~vlI~G~g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~ 240 (299)
+++++.|+|+++......+++++|+|+|+|++|++++|+|+..|++++++++++++.+.+++++|++++++..+.+.+.+
T Consensus 161 l~~~~~ta~~al~~~~~~~~g~~vlV~G~G~vG~~av~~Ak~~G~~vi~~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~ 240 (357)
T PLN02514 161 LLCAGVTVYSPLSHFGLKQSGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSDKKREEALEHLGADDYLVSSDAAEMQE 240 (357)
T ss_pred hhhhHHHHHHHHHHcccCCCCCeEEEEcccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhcCCcEEecCCChHHHHH
Confidence 99999999999977766689999999999999999999999999999999988888877767899988887665555555
Q ss_pred hcCCccEEEEcCCCchhHHHHHHhcccCcEEEEEcCC-CceeeChhhhhcCCeeeeeec
Q 022313 241 LGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP-SKVKFSPASLNIGNAPLFRFK 298 (299)
Q Consensus 241 ~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~-~~~~~~~~~l~~~~~~~~g~~ 298 (299)
...++|++||++|....+..++++++++|+++.+|.. ...++++..++.+++++.|+.
T Consensus 241 ~~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~ 299 (357)
T PLN02514 241 AADSLDYIIDTVPVFHPLEPYLSLLKLDGKLILMGVINTPLQFVTPMLMLGRKVITGSF 299 (357)
T ss_pred hcCCCcEEEECCCchHHHHHHHHHhccCCEEEEECCCCCCCcccHHHHhhCCcEEEEEe
Confidence 5568999999999766689999999999999999987 556788888999999999863
No 9
>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd
Probab=100.00 E-value=4.3e-43 Score=319.77 Aligned_cols=277 Identities=27% Similarity=0.406 Sum_probs=235.2
Q ss_pred CCcccceeeecCCCCCCcEEEEEceeecccchhhhhccCCCCCCCCccccccccEEEEEecCCCCCcccCCEEEEecccc
Q 022313 19 SGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVN 98 (299)
Q Consensus 19 ~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~ 98 (299)
++.+++++++.|++.++||+|||+++++|++|++.+.|.++ ...|.++|||++|+|+++|+++.++++||+|.+.+. .
T Consensus 18 ~~~l~~~~~~~P~~~~~evlV~v~~~gi~~~D~~~~~g~~~-~~~p~i~GhE~~G~V~~vG~~v~~~~~GdrV~~~~~-~ 95 (371)
T cd08281 18 SRPLVIEEVELDPPGPGEVLVKIAAAGLCHSDLSVINGDRP-RPLPMALGHEAAGVVVEVGEGVTDLEVGDHVVLVFV-P 95 (371)
T ss_pred CCCceEEEeecCCCCCCeEEEEEEEEeeCccchHhhcCCCC-CCCCccCCccceeEEEEeCCCCCcCCCCCEEEEccC-C
Confidence 47789999999999999999999999999999999988654 356889999999999999999999999999987544 4
Q ss_pred CCCCCccccCCCCcccccccccc-ccccC--------CC-----CccCCcceeeEEeecceEEEcCCCCCcccccccchh
Q 022313 99 SCRDCEYCNDGLEVHCARSVYTF-NAIDA--------DG-----TITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCA 164 (299)
Q Consensus 99 ~c~~c~~~~~~~~~~~~~~~~~~-~~~~~--------~g-----~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~ 164 (299)
.|+.|.+|+.+.+++|.+..... .|... ++ ....|+|+||+.++++.++++|+++++++|+.+.++
T Consensus 96 ~cg~c~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~g~G~~aey~~v~~~~~~~lP~~l~~~~aa~~~~~ 175 (371)
T cd08281 96 SCGHCRPCAEGRPALCEPGAAANGAGTLLSGGRRLRLRGGEINHHLGVSAFAEYAVVSRRSVVKIDKDVPLEIAALFGCA 175 (371)
T ss_pred CCCCCccccCCCcccccCccccccccccccCcccccccCcccccccCcccceeeEEecccceEECCCCCChHHhhhhcch
Confidence 89999999999999998753221 11110 00 011379999999999999999999999999999999
Q ss_pred hHHHHHHhhhccCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCchHHHHHHHhcCCCEEEeCCCHHH---HHH
Q 022313 165 GITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKFVVSSDLEQ---MKA 240 (299)
Q Consensus 165 ~~ta~~al~~~~~~~~g~~vlI~G~g~~G~~a~~~a~~~g~-~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~---~~~ 240 (299)
+.|+|+++.....++++++|+|.|+|++|++++|+|+..|+ +|+++++++++++.+ +++|++++++..+.+. +.+
T Consensus 176 ~~ta~~~~~~~~~i~~g~~VlV~G~G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a-~~~Ga~~~i~~~~~~~~~~i~~ 254 (371)
T cd08281 176 VLTGVGAVVNTAGVRPGQSVAVVGLGGVGLSALLGAVAAGASQVVAVDLNEDKLALA-RELGATATVNAGDPNAVEQVRE 254 (371)
T ss_pred HHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHH-HHcCCceEeCCCchhHHHHHHH
Confidence 99999998666667999999999999999999999999999 699999998888877 7899999998776443 333
Q ss_pred hc-CCccEEEEcCCCchhHHHHHHhcccCcEEEEEcCC-C--ceeeChhhhhcCCeeeeeec
Q 022313 241 LG-KSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP-S--KVKFSPASLNIGNAPLFRFK 298 (299)
Q Consensus 241 ~~-~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~-~--~~~~~~~~l~~~~~~~~g~~ 298 (299)
+. +++|++||++|....+..++++++++|+++.+|.. . ..+++...++.|+++++|+.
T Consensus 255 ~~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~ 316 (371)
T cd08281 255 LTGGGVDYAFEMAGSVPALETAYEITRRGGTTVTAGLPDPEARLSVPALSLVAEERTLKGSY 316 (371)
T ss_pred HhCCCCCEEEECCCChHHHHHHHHHHhcCCEEEEEccCCCCceeeecHHHHhhcCCEEEEEe
Confidence 32 47999999999877799999999999999999987 2 45788888999999999863
No 10
>PRK09880 L-idonate 5-dehydrogenase; Provisional
Probab=100.00 E-value=4.9e-43 Score=316.22 Aligned_cols=280 Identities=20% Similarity=0.292 Sum_probs=231.2
Q ss_pred cceEEeeeCCCCcccceeeecCCCCCCcEEEEEceeecccchhhhhc-cCCC--CCCCCccccccccEEEEEecCCCCCc
Q 022313 9 DCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTR-NKHG--DSKYPLVPGHEIVGIVKEVGHNVSRF 85 (299)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~D~~~~~-g~~~--~~~~p~~lG~e~~G~V~~vG~~v~~~ 85 (299)
++++..+. .++.+++++.+.| +.++||||||+++++|++|++.+. |..+ ..++|.++|||++|+|+++ ++++|
T Consensus 4 ~~~~~~~~-~~~~~~~~~~~~p-~~~~evlVkv~a~gic~sD~~~~~~g~~~~~~~~~p~v~GhE~~G~V~~v--~v~~~ 79 (343)
T PRK09880 4 KTQSCVVA-GKKDVAVTEQEIE-WNNNGTLVQITRGGICGSDLHYYQEGKVGNFVIKAPMVLGHEVIGKIVHS--DSSGL 79 (343)
T ss_pred cceEEEEe-cCCceEEEecCCC-CCCCeEEEEEEEEEECccccHhhccCCcccccccCCcccCcccEEEEEEe--cCccC
Confidence 44555553 6777999999987 589999999999999999998875 4332 2357899999999999999 68889
Q ss_pred ccCCEEEEeccccCCCCCccccCCCCccccccccccccccCCCCccCCcceeeEEeecceEEEcCCCCCcccccccchhh
Q 022313 86 KVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAG 165 (299)
Q Consensus 86 ~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~ 165 (299)
++||+|.+.+. .+|++|.+|+.+.+++|++..+. |.........|+|+||+.++++.++++|+++++++++ +..++
T Consensus 80 ~vGdrV~~~~~-~~cg~c~~c~~g~~~~c~~~~~~--g~~~~~~~~~G~~aey~~v~~~~~~~~P~~l~~~~aa-~~~~~ 155 (343)
T PRK09880 80 KEGQTVAINPS-KPCGHCKYCLSHNENQCTTMRFF--GSAMYFPHVDGGFTRYKVVDTAQCIPYPEKADEKVMA-FAEPL 155 (343)
T ss_pred CCCCEEEECCC-CCCcCChhhcCCChhhCCCccee--ecccccCCCCCceeeeEEechHHeEECCCCCCHHHHH-hhcHH
Confidence 99999988765 58999999999999999986542 2110001246999999999999999999999987655 55678
Q ss_pred HHHHHHhhhccCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCchHHHHHHHhcCCCEEEeCCCHHHHH--Hhc
Q 022313 166 ITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMK--ALG 242 (299)
Q Consensus 166 ~ta~~al~~~~~~~~g~~vlI~G~g~~G~~a~~~a~~~g~-~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~--~~~ 242 (299)
.++|+++..... .++++|+|.|+|++|++++|+|+..|+ +|+++++++++++.+ +++|+++++++++.+..+ ...
T Consensus 156 ~~a~~al~~~~~-~~g~~VlV~G~G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a-~~lGa~~vi~~~~~~~~~~~~~~ 233 (343)
T PRK09880 156 AVAIHAAHQAGD-LQGKRVFVSGVGPIGCLIVAAVKTLGAAEIVCADVSPRSLSLA-REMGADKLVNPQNDDLDHYKAEK 233 (343)
T ss_pred HHHHHHHHhcCC-CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHH-HHcCCcEEecCCcccHHHHhccC
Confidence 899999987766 689999999999999999999999999 689999999888887 689999999876533211 123
Q ss_pred CCccEEEEcCCCchhHHHHHHhcccCcEEEEEcCC-CceeeChhhhhcCCeeeeeec
Q 022313 243 KSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP-SKVKFSPASLNIGNAPLFRFK 298 (299)
Q Consensus 243 ~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~-~~~~~~~~~l~~~~~~~~g~~ 298 (299)
+++|++||++|++..++.++++++++|+++.+|.. ...++++..++.|+++++|+.
T Consensus 234 g~~D~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~~~i~g~~ 290 (343)
T PRK09880 234 GYFDVSFEVSGHPSSINTCLEVTRAKGVMVQVGMGGAPPEFPMMTLIVKEISLKGSF 290 (343)
T ss_pred CCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCCccCHHHHHhCCcEEEEEe
Confidence 46999999999876789999999999999999987 567788888999999998863
No 11
>PLN02740 Alcohol dehydrogenase-like
Probab=100.00 E-value=7e-43 Score=319.38 Aligned_cols=290 Identities=22% Similarity=0.323 Sum_probs=239.6
Q ss_pred cccccceEEeeeCCCCcccceeeecCCCCCCcEEEEEceeecccchhhhhccCCC-CCCCCccccccccEEEEEecCCCC
Q 022313 5 TASKDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG-DSKYPLVPGHEIVGIVKEVGHNVS 83 (299)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~D~~~~~g~~~-~~~~p~~lG~e~~G~V~~vG~~v~ 83 (299)
.++++|+++.+..+.+.+.+++++.|++.++||+|||+++++|++|++.+.|... ...+|.++|||++|+|+++|++++
T Consensus 6 ~~~~~mka~~~~~~~~~~~~~e~~~P~~~~~eVlV~v~~~gic~sD~~~~~g~~~~~~~~p~i~GhE~~G~V~~vG~~v~ 85 (381)
T PLN02740 6 GKVITCKAAVAWGPGEPLVMEEIRVDPPQKMEVRIKILYTSICHTDLSAWKGENEAQRAYPRILGHEAAGIVESVGEGVE 85 (381)
T ss_pred ccceeeEEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEecChhhHHHhCCCCcccCCCCccccccceEEEEEeCCCCC
Confidence 4567788888766555688899999999999999999999999999999988653 235688999999999999999999
Q ss_pred CcccCCEEEEeccccCCCCCccccCCCCccccccccccc-------cccCC----------CCccCCcceeeEEeecceE
Q 022313 84 RFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFN-------AIDAD----------GTITKGGYSSYIVVHERYC 146 (299)
Q Consensus 84 ~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~-------~~~~~----------g~~~~g~~~~~~~~~~~~~ 146 (299)
+|++||+|++.+. .+|+.|.+|+.+.++.|.+..+... |.... +....|+|+||+.+|++.+
T Consensus 86 ~~~vGdrV~~~~~-~~cg~C~~c~~g~~~~C~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~ 164 (381)
T PLN02740 86 DLKAGDHVIPIFN-GECGDCRYCKRDKTNLCETYRVDPFKSVMVNDGKTRFSTKGDGQPIYHFLNTSTFTEYTVLDSACV 164 (381)
T ss_pred cCCCCCEEEecCC-CCCCCChhhcCCCcccccCccccccccccccCCCcccccccCCCcccccccCccceeEEEEehHHe
Confidence 9999999987665 4899999999999999998643210 00000 0112599999999999999
Q ss_pred EEcCCCCCcccccccchhhHHHHHHhhhccCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCchHHHHHHHhcC
Q 022313 147 YKIANDYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLG 225 (299)
Q Consensus 147 ~~~p~~~~~~~aa~~~~~~~ta~~al~~~~~~~~g~~vlI~G~g~~G~~a~~~a~~~g~-~v~~~~~~~~~~~~~~~~~g 225 (299)
+++|+++++++++.+.+++.|+|+++.....+++|++|||+|+|++|++++|+|+..|+ +|+++++++++++.+ +++|
T Consensus 165 ~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a-~~~G 243 (381)
T PLN02740 165 VKIDPNAPLKKMSLLSCGVSTGVGAAWNTANVQAGSSVAIFGLGAVGLAVAEGARARGASKIIGVDINPEKFEKG-KEMG 243 (381)
T ss_pred EECCCCCCHHHhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHCCCCcEEEEcCChHHHHHH-HHcC
Confidence 99999999999999999999999987666667999999999999999999999999999 699999999998888 6899
Q ss_pred CCEEEeCCCH-----HHHHHhc-CCccEEEEcCCCchhHHHHHHhcccC-cEEEEEcCC-Cc--eeeChhhhhcCCeeee
Q 022313 226 ADKFVVSSDL-----EQMKALG-KSLDFIIDTASGDHPFDAYMSLLKVA-GVYVLVGFP-SK--VKFSPASLNIGNAPLF 295 (299)
Q Consensus 226 ~~~v~~~~~~-----~~~~~~~-~~~d~v~d~~g~~~~~~~~~~~l~~~-G~~v~~g~~-~~--~~~~~~~l~~~~~~~~ 295 (299)
++++++..+. +.+.++. +++|++||++|+...+..++++++++ |+++.+|.. .. .++++..++ +++++.
T Consensus 244 a~~~i~~~~~~~~~~~~v~~~~~~g~dvvid~~G~~~~~~~a~~~~~~g~G~~v~~G~~~~~~~~~~~~~~~~-~~~~i~ 322 (381)
T PLN02740 244 ITDFINPKDSDKPVHERIREMTGGGVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPTPKMLPLHPMELF-DGRSIT 322 (381)
T ss_pred CcEEEecccccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhhcCCCEEEEEccCCCCceecccHHHHh-cCCeEE
Confidence 9999987642 2233333 47999999999877799999999996 999999987 33 344444444 788888
Q ss_pred ee
Q 022313 296 RF 297 (299)
Q Consensus 296 g~ 297 (299)
|+
T Consensus 323 g~ 324 (381)
T PLN02740 323 GS 324 (381)
T ss_pred EE
Confidence 75
No 12
>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]
Probab=100.00 E-value=9.8e-43 Score=313.77 Aligned_cols=280 Identities=26% Similarity=0.340 Sum_probs=225.6
Q ss_pred EeeeCCCCcccceeeecCCCCCCcEEEEEceeecccchhhhhccCCCCCCCCc-cccccccEEEEEecCCCCCcccCCEE
Q 022313 13 WAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPL-VPGHEIVGIVKEVGHNVSRFKVGDHV 91 (299)
Q Consensus 13 ~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~D~~~~~g~~~~~~~p~-~lG~e~~G~V~~vG~~v~~~~~Gd~V 91 (299)
+..+.+.+..++.+.+.|.+.++||+|||.+++||++|++.+++..+....+. ++|||++|+|+++| .++.+++||||
T Consensus 4 ~~~~~~~~~~~~~~~~~p~~~p~~vlVkv~~~gICGSDlh~~~g~~~~~~~~~~i~GHE~~G~V~evG-~~~~~~~GdrV 82 (350)
T COG1063 4 AVVYVGGGDVRLEEPPPPIPGPGDVLIRVTATGICGSDLHIYRGGEPFVPPGDIILGHEFVGEVVEVG-VVRGFKVGDRV 82 (350)
T ss_pred eEEEecCCccccccCCCCCCCCCeEEEEEEEEeEchhhhhhccCCCCCCCCCCcccCccceEEEEEec-cccCCCCCCEE
Confidence 33434444445667766778999999999999999999999999766555565 89999999999999 77889999999
Q ss_pred EEeccccCCCCCccccCCCCccccccccccccccCCCCccCCcceeeEEeecceEE-EcCCCCCcccccccchhhHHHHH
Q 022313 92 GVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCY-KIANDYPLALAAPLLCAGITVYT 170 (299)
Q Consensus 92 ~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~-~~p~~~~~~~aa~~~~~~~ta~~ 170 (299)
++.+. .+|+.|.+|+.+.+++|.+.++. |....+....|+|+||+.+|.+.++ ++|+++ ..+++++..++.++|+
T Consensus 83 vv~~~-~~Cg~C~~C~~G~~~~C~~~~~~--g~~~~~~~~~G~~aEyv~vp~~~~~~~~pd~~-~~~~aal~epla~~~~ 158 (350)
T COG1063 83 VVEPN-IPCGHCRYCRAGEYNLCENPGFY--GYAGLGGGIDGGFAEYVRVPADFNLAKLPDGI-DEEAAALTEPLATAYH 158 (350)
T ss_pred EECCC-cCCCCChhHhCcCcccCCCcccc--ccccccCCCCCceEEEEEeccccCeecCCCCC-ChhhhhhcChhhhhhh
Confidence 88766 49999999999999999955422 2111122367999999999976544 558888 6777788889999987
Q ss_pred HhhhccCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCchHHHHHHHhcCCCEEEeCCCH---HHHHHhc--CC
Q 022313 171 PMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKFVVSSDL---EQMKALG--KS 244 (299)
Q Consensus 171 al~~~~~~~~g~~vlI~G~g~~G~~a~~~a~~~g~-~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~---~~~~~~~--~~ 244 (299)
+.......+++.+|+|+|+|++|++++++++..|+ +|++++++++|++.+++..+++.+++.... ..+.+.+ .+
T Consensus 159 ~~a~~~~~~~~~~V~V~GaGpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~~~g~~~~~~~~~~~~~~~~~~~t~g~g 238 (350)
T COG1063 159 GHAERAAVRPGGTVVVVGAGPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVVVNPSEDDAGAEILELTGGRG 238 (350)
T ss_pred hhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHhCCCeEeecCccccHHHHHHHHhCCCC
Confidence 74444433666699999999999999999999998 888889999999999544778777766542 2233444 36
Q ss_pred ccEEEEcCCCchhHHHHHHhcccCcEEEEEcCC-Cce-eeChhhhhcCCeeeeee
Q 022313 245 LDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP-SKV-KFSPASLNIGNAPLFRF 297 (299)
Q Consensus 245 ~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~-~~~-~~~~~~l~~~~~~~~g~ 297 (299)
+|++|||+|...++..++++++++|+++.+|.. ... .++...++.|+++++|-
T Consensus 239 ~D~vie~~G~~~~~~~ai~~~r~gG~v~~vGv~~~~~~~~~~~~~~~kel~l~gs 293 (350)
T COG1063 239 ADVVIEAVGSPPALDQALEALRPGGTVVVVGVYGGEDIPLPAGLVVSKELTLRGS 293 (350)
T ss_pred CCEEEECCCCHHHHHHHHHHhcCCCEEEEEeccCCccCccCHHHHHhcccEEEec
Confidence 999999999888899999999999999999999 444 78899999999999984
No 13
>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase. Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.
Probab=100.00 E-value=1.8e-42 Score=314.32 Aligned_cols=285 Identities=25% Similarity=0.383 Sum_probs=238.3
Q ss_pred ceEEeeeCCCCcccceeeecCCCCCCcEEEEEceeecccchhhhhccCCCCCCCCccccccccEEEEEecCCCCCcccCC
Q 022313 10 CLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGD 89 (299)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd 89 (299)
|+++.+.+..+++++++++.|++.++||+|||.++++|++|++.+.|... ..+|.++|||++|+|+++|+++.+|++||
T Consensus 2 mka~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~g~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd 80 (358)
T TIGR03451 2 VRGVIARSKGAPVELETIVVPDPGPGEVIVDIQACGVCHTDLHYREGGIN-DEFPFLLGHEAAGVVEAVGEGVTDVAPGD 80 (358)
T ss_pred cEEEEEccCCCCCEEEEEECCCCCCCeEEEEEEEEeecHHHHHHhcCCcc-ccCCcccccceEEEEEEeCCCCcccCCCC
Confidence 34555545555689999999999999999999999999999998888654 35688999999999999999999999999
Q ss_pred EEEEeccccCCCCCccccCCCCcccccccccccccc-CCCC-----ccCCcceeeEEeecceEEEcCCCCCcccccccch
Q 022313 90 HVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAID-ADGT-----ITKGGYSSYIVVHERYCYKIANDYPLALAAPLLC 163 (299)
Q Consensus 90 ~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~-~~g~-----~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~ 163 (299)
+|.+.+. .+|+.|.+|..+.+++|........... .+|. ...|+|+||+.+|++.++++|+++++++++.+++
T Consensus 81 rV~~~~~-~~cg~c~~c~~g~~~~c~~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~ip~~~~~~~aa~l~~ 159 (358)
T TIGR03451 81 YVVLNWR-AVCGQCRACKRGRPWYCFDTHNATQKMTLTDGTELSPALGIGAFAEKTLVHAGQCTKVDPAADPAAAGLLGC 159 (358)
T ss_pred EEEEccC-CCCCCChHHhCcCcccCcCccccccccccccCcccccccccccccceEEEehhheEECCCCCChhHhhhhcc
Confidence 9987665 4899999999999999986422111000 0111 1359999999999999999999999999999999
Q ss_pred hhHHHHHHhhhccCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCchHHHHHHHhcCCCEEEeCCCHHH---HH
Q 022313 164 AGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKFVVSSDLEQ---MK 239 (299)
Q Consensus 164 ~~~ta~~al~~~~~~~~g~~vlI~G~g~~G~~a~~~a~~~g~-~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~---~~ 239 (299)
.+.++|+++.....++++++|||+|+|++|++++|+|+..|+ +|+++++++++++.+ +++|+++++++.+.+. +.
T Consensus 160 ~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~-~~~Ga~~~i~~~~~~~~~~i~ 238 (358)
T TIGR03451 160 GVMAGLGAAVNTGGVKRGDSVAVIGCGGVGDAAIAGAALAGASKIIAVDIDDRKLEWA-REFGATHTVNSSGTDPVEAIR 238 (358)
T ss_pred cchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHcCCceEEcCCCcCHHHHHH
Confidence 999999887766667999999999999999999999999999 599999998888888 7899999998765433 33
Q ss_pred Hhc--CCccEEEEcCCCchhHHHHHHhcccCcEEEEEcCC-C--ceeeChhhhhcCCeeeeee
Q 022313 240 ALG--KSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP-S--KVKFSPASLNIGNAPLFRF 297 (299)
Q Consensus 240 ~~~--~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~-~--~~~~~~~~l~~~~~~~~g~ 297 (299)
+.. .++|++||++|+...++.++++++++|+++.+|.. . ..++++..++.|++++.++
T Consensus 239 ~~~~~~g~d~vid~~g~~~~~~~~~~~~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~~~ 301 (358)
T TIGR03451 239 ALTGGFGADVVIDAVGRPETYKQAFYARDLAGTVVLVGVPTPDMTLELPLLDVFGRGGALKSS 301 (358)
T ss_pred HHhCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCCceeeccHHHHhhcCCEEEEe
Confidence 333 47999999999876789999999999999999987 3 3567777888999999875
No 14
>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the
Probab=100.00 E-value=6.4e-42 Score=311.88 Aligned_cols=286 Identities=24% Similarity=0.361 Sum_probs=237.6
Q ss_pred cceEEeeeCCCCcccceeeecCCCCCCcEEEEEceeecccchhhhhccCCCCCCCCccccccccEEEEEecCCCCCcccC
Q 022313 9 DCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVG 88 (299)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~G 88 (299)
+++++.+...++.+++++++.|+++++||+|||.++++|++|++.+.|..+...+|.++|||++|+|+++|+++++|++|
T Consensus 2 ~~ka~~~~~~~~~~~l~~~~~p~~~~~evlIkv~a~gi~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G 81 (369)
T cd08301 2 TCKAAVAWEAGKPLVIEEVEVAPPQAMEVRIKILHTSLCHTDVYFWEAKGQTPLFPRILGHEAAGIVESVGEGVTDLKPG 81 (369)
T ss_pred ccEEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEeeCchhHHHhcCCCCCCCCCcccccccceEEEEeCCCCCccccC
Confidence 45666766667779999999999999999999999999999999988876555678999999999999999999999999
Q ss_pred CEEEEeccccCCCCCccccCCCCccccccccc-cccccC---------CC-----CccCCcceeeEEeecceEEEcCCCC
Q 022313 89 DHVGVGTYVNSCRDCEYCNDGLEVHCARSVYT-FNAIDA---------DG-----TITKGGYSSYIVVHERYCYKIANDY 153 (299)
Q Consensus 89 d~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~-~~~~~~---------~g-----~~~~g~~~~~~~~~~~~~~~~p~~~ 153 (299)
|+|++.+. .+|+.|.+|+.+.+++|...... ..|... .| ....|+|+||+.+++..++++|+++
T Consensus 82 drV~~~~~-~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~~ 160 (369)
T cd08301 82 DHVLPVFT-GECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINPEA 160 (369)
T ss_pred CEEEEccC-CCCCCCchhcCCCcccCcCcccccccccccCCCccccccCCcceeeeeccccceeEEEEecccEEECCCCC
Confidence 99987544 58999999999999999985432 011100 00 0134899999999999999999999
Q ss_pred CcccccccchhhHHHHHHhhhccCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCchHHHHHHHhcCCCEEEeC
Q 022313 154 PLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKFVVS 232 (299)
Q Consensus 154 ~~~~aa~~~~~~~ta~~al~~~~~~~~g~~vlI~G~g~~G~~a~~~a~~~g~-~v~~~~~~~~~~~~~~~~~g~~~v~~~ 232 (299)
++++++.+++.+.|+|+++.....++++++|||+|+|++|++++|+|+..|+ +|+++++++++.+.+ +++|++.+++.
T Consensus 161 ~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~-~~~Ga~~~i~~ 239 (369)
T cd08301 161 PLDKVCLLSCGVSTGLGAAWNVAKVKKGSTVAIFGLGAVGLAVAEGARIRGASRIIGVDLNPSKFEQA-KKFGVTEFVNP 239 (369)
T ss_pred CHHHhhhhcchhhHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHcCCceEEcc
Confidence 9999999999999999987766667999999999999999999999999999 899999999998888 78999999877
Q ss_pred CCH-----HHHHHh-cCCccEEEEcCCCchhHHHHHHhcccC-cEEEEEcCC-C--ceeeChhhhhcCCeeeeee
Q 022313 233 SDL-----EQMKAL-GKSLDFIIDTASGDHPFDAYMSLLKVA-GVYVLVGFP-S--KVKFSPASLNIGNAPLFRF 297 (299)
Q Consensus 233 ~~~-----~~~~~~-~~~~d~v~d~~g~~~~~~~~~~~l~~~-G~~v~~g~~-~--~~~~~~~~l~~~~~~~~g~ 297 (299)
.+. +.+.++ .+++|++||++|+...+..++++++++ |+++.+|.. . ..++++..++ +++++.|+
T Consensus 240 ~~~~~~~~~~v~~~~~~~~d~vid~~G~~~~~~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~~-~~~~i~g~ 313 (369)
T cd08301 240 KDHDKPVQEVIAEMTGGGVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHKDAVFSTHPMNLL-NGRTLKGT 313 (369)
T ss_pred cccchhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHhhcCCCEEEEECcCCCCcccccCHHHHh-cCCeEEEE
Confidence 642 123333 357999999999877788999999996 999999987 3 3345544444 78999886
No 15
>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase. The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.
Probab=100.00 E-value=5.3e-42 Score=312.17 Aligned_cols=284 Identities=24% Similarity=0.339 Sum_probs=232.5
Q ss_pred ceEEeeeCCCCcccceeeecCCCCCCcEEEEEceeecccchhhhhccCCCCCCCCccccccccEEEEEecCCCCCcccCC
Q 022313 10 CLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGD 89 (299)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd 89 (299)
++++.+...++.+++++++.|++.++||+|||+++++|++|++.+.|.++...+|.++|||++|+|+++|+++++|++||
T Consensus 2 ~~a~~~~~~~~~l~~~~~~~P~~~~~eVlI~v~a~gi~~sD~~~~~g~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd 81 (368)
T TIGR02818 2 SRAAVAWAAGQPLKIEEVDVEMPQKGEVLVRIVATGVCHTDAFTLSGADPEGVFPVILGHEGAGIVEAVGEGVTSVKVGD 81 (368)
T ss_pred ceEEEEecCCCCeEEEEecCCCCCCCeEEEEEEEecccHHHHHHhcCCCCCCCCCeeeccccEEEEEEECCCCccCCCCC
Confidence 44556656667799999999999999999999999999999999988765456789999999999999999999999999
Q ss_pred EEEEeccccCCCCCccccCCCCccccccccc-cccccCC--------C-----CccCCcceeeEEeecceEEEcCCCCCc
Q 022313 90 HVGVGTYVNSCRDCEYCNDGLEVHCARSVYT-FNAIDAD--------G-----TITKGGYSSYIVVHERYCYKIANDYPL 155 (299)
Q Consensus 90 ~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~-~~~~~~~--------g-----~~~~g~~~~~~~~~~~~~~~~p~~~~~ 155 (299)
+|.+.+. .+|+.|.+|+.+.++.|.+.... ..|...+ | ....|+|+||+.+|.+.++++|+++++
T Consensus 82 rV~~~~~-~~cg~C~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~lP~~l~~ 160 (368)
T TIGR02818 82 HVIPLYT-AECGECKFCLSGKTNLCVAVRETQGKGLMPDGTSRFSKDGQPIYHYMGCSTFSEYTVVPEISLAKINPAAPL 160 (368)
T ss_pred EEEEcCC-CCCCCChhhhCCCcccccCcccccccccccCCccccccCCCcccccccCccceeeEEechhheEECCCCCCH
Confidence 9987654 48999999999999999874311 0111100 1 012479999999999999999999999
Q ss_pred ccccccchhhHHHHHHhhhccCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCchHHHHHHHhcCCCEEEeCCC
Q 022313 156 ALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKFVVSSD 234 (299)
Q Consensus 156 ~~aa~~~~~~~ta~~al~~~~~~~~g~~vlI~G~g~~G~~a~~~a~~~g~-~v~~~~~~~~~~~~~~~~~g~~~v~~~~~ 234 (299)
++++.+++++.|+|+++.....++++++|||+|+|++|++++|+|+..|+ +|+++++++++++.+ +++|++++++..+
T Consensus 161 ~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a-~~~Ga~~~i~~~~ 239 (368)
T TIGR02818 161 EEVCLLGCGVTTGIGAVLNTAKVEEGDTVAVFGLGGIGLSVIQGARMAKASRIIAIDINPAKFELA-KKLGATDCVNPND 239 (368)
T ss_pred HHhhhhcchhHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHhCCCeEEcccc
Confidence 99999999999999998766667999999999999999999999999999 799999999988888 7899999988663
Q ss_pred --H---HHHHHhc-CCccEEEEcCCCchhHHHHHHhcccC-cEEEEEcCC-C--ceeeChhhhhcCCeeeee
Q 022313 235 --L---EQMKALG-KSLDFIIDTASGDHPFDAYMSLLKVA-GVYVLVGFP-S--KVKFSPASLNIGNAPLFR 296 (299)
Q Consensus 235 --~---~~~~~~~-~~~d~v~d~~g~~~~~~~~~~~l~~~-G~~v~~g~~-~--~~~~~~~~l~~~~~~~~g 296 (299)
. +.+.++. +++|++||++|+...+..++++++++ |+++.+|.. . ..+++...++.+ ..++|
T Consensus 240 ~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~~~~~~-~~~~g 310 (368)
T TIGR02818 240 YDKPIQEVIVEITDGGVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGAGQEISTRPFQLVTG-RVWRG 310 (368)
T ss_pred cchhHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHhhcCCCeEEEEeccCCCCcccccHHHHhcc-ceEEE
Confidence 1 2233333 48999999999877789999999886 999999986 2 344555555533 34554
No 16
>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.
Probab=100.00 E-value=3.2e-42 Score=309.01 Aligned_cols=265 Identities=29% Similarity=0.469 Sum_probs=232.0
Q ss_pred CcccceeeecCCCCCCcEEEEEceeecccchhhhhccCCCCCCCCccccccccEEEEEecCCCCCcccCCEEEEeccccC
Q 022313 20 GVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNS 99 (299)
Q Consensus 20 ~~~~~~~~~~p~~~~~evlv~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~ 99 (299)
..++++++|.|++.++||+|||+++++|++|++.+.|.++....|.++|||++|+|+++|+++++|++||+|.+.+...+
T Consensus 13 ~~l~~~~~p~P~~~~~evlVkv~~~gi~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~ 92 (329)
T TIGR02822 13 GPLRFVERPVPRPGPGELLVRVRACGVCRTDLHVSEGDLPVHRPRVTPGHEVVGEVAGRGADAGGFAVGDRVGIAWLRRT 92 (329)
T ss_pred CCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCCCCCCCccCCcceEEEEEEECCCCcccCCCCEEEEcCccCc
Confidence 46889999999999999999999999999999999887654445789999999999999999999999999988776668
Q ss_pred CCCCccccCCCCccccccccccccccCCCCccCCcceeeEEeecceEEEcCCCCCcccccccchhhHHHHHHhhhccCCC
Q 022313 100 CRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQ 179 (299)
Q Consensus 100 c~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~al~~~~~~~ 179 (299)
|+.|.+|+.+.++.|++..+. |....|+|+||+.+|++.++++|+++++++++++++.+.|+|+++.. ..++
T Consensus 93 c~~c~~c~~g~~~~c~~~~~~-------g~~~~G~~aey~~v~~~~~~~lP~~~~~~~aa~l~~~~~ta~~~~~~-~~~~ 164 (329)
T TIGR02822 93 CGVCRYCRRGAENLCPASRYT-------GWDTDGGYAEYTTVPAAFAYRLPTGYDDVELAPLLCAGIIGYRALLR-ASLP 164 (329)
T ss_pred CCCChHHhCcCcccCCCcccC-------CcccCCcceeEEEeccccEEECCCCCCHHHhHHHhccchHHHHHHHh-cCCC
Confidence 999999999999999986432 22346999999999999999999999999999999999999999975 4569
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEEeCCCHHHHHHhcCCccEEEEcCCCchhHH
Q 022313 180 PGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHPFD 259 (299)
Q Consensus 180 ~g~~vlI~G~g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~ 259 (299)
++++|||+|+|++|++++|+|+..|++|+++++++++.+.+ +++|++++++..+. ..+++|+++++.+...++.
T Consensus 165 ~g~~VlV~G~g~iG~~a~~~a~~~G~~vi~~~~~~~~~~~a-~~~Ga~~vi~~~~~-----~~~~~d~~i~~~~~~~~~~ 238 (329)
T TIGR02822 165 PGGRLGLYGFGGSAHLTAQVALAQGATVHVMTRGAAARRLA-LALGAASAGGAYDT-----PPEPLDAAILFAPAGGLVP 238 (329)
T ss_pred CCCEEEEEcCCHHHHHHHHHHHHCCCeEEEEeCChHHHHHH-HHhCCceecccccc-----CcccceEEEECCCcHHHHH
Confidence 99999999999999999999999999999999999888777 79999999875431 1257899999888777799
Q ss_pred HHHHhcccCcEEEEEcCC--CceeeChhhhhcCCeeeeeec
Q 022313 260 AYMSLLKVAGVYVLVGFP--SKVKFSPASLNIGNAPLFRFK 298 (299)
Q Consensus 260 ~~~~~l~~~G~~v~~g~~--~~~~~~~~~l~~~~~~~~g~~ 298 (299)
.++++++++|+++.+|.. ...++++..++.|++++.|..
T Consensus 239 ~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~ 279 (329)
T TIGR02822 239 PALEALDRGGVLAVAGIHLTDTPPLNYQRHLFYERQIRSVT 279 (329)
T ss_pred HHHHhhCCCcEEEEEeccCccCCCCCHHHHhhCCcEEEEee
Confidence 999999999999999986 334677888888999998753
No 17
>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like. MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at
Probab=100.00 E-value=5.1e-42 Score=309.05 Aligned_cols=278 Identities=26% Similarity=0.377 Sum_probs=234.9
Q ss_pred eEEeeeCCCCcccceeeecCCCCCCcEEEEEceeecccchhhhhccCCCC-CCCCccccccccEEEEEecCCCCCcccCC
Q 022313 11 LGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGD-SKYPLVPGHEIVGIVKEVGHNVSRFKVGD 89 (299)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~D~~~~~g~~~~-~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd 89 (299)
+++.+. .++.+++++++.|++.++||+||+.++++|++|++.+.+.+.. ...|.++|||++|+|+++|++++++++||
T Consensus 2 ka~~~~-~~~~l~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd 80 (339)
T cd08239 2 RGAVFP-GDRTVELREFPVPVPGPGEVLLRVKASGLCGSDLHYYYHGHRAPAYQGVIPGHEPAGVVVAVGPGVTHFRVGD 80 (339)
T ss_pred eEEEEe-cCCceEEEecCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCccCCCCceeccCceEEEEEECCCCccCCCCC
Confidence 444443 5678999999999999999999999999999999988765431 23578999999999999999999999999
Q ss_pred EEEEeccccCCCCCccccCCCCccccccccccccccCCCCccCCcceeeEEeecceEEEcCCCCCcccccccchhhHHHH
Q 022313 90 HVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVY 169 (299)
Q Consensus 90 ~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~ 169 (299)
+|.+.+.. .|+.|.+|+.+.++.|.+..+. . |....|+|+||+.+|++.++++|+++++++++.+++++.|+|
T Consensus 81 ~V~~~~~~-~c~~c~~c~~g~~~~c~~~~~~-~-----g~~~~G~~ae~~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~ 153 (339)
T cd08239 81 RVMVYHYV-GCGACRNCRRGWMQLCTSKRAA-Y-----GWNRDGGHAEYMLVPEKTLIPLPDDLSFADGALLLCGIGTAY 153 (339)
T ss_pred EEEECCCC-CCCCChhhhCcCcccCcCcccc-c-----ccCCCCcceeEEEechHHeEECCCCCCHHHhhhhcchHHHHH
Confidence 99876654 8999999999999999876431 1 234569999999999999999999999999999999999999
Q ss_pred HHhhhccCCCCCCEEEEEcCChHHHHHHHHHHHCCCe-EEEEeCCchHHHHHHHhcCCCEEEeCCCHH--HHHHhc--CC
Q 022313 170 TPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLN-VTVLSTSTSKKEEALSLLGADKFVVSSDLE--QMKALG--KS 244 (299)
Q Consensus 170 ~al~~~~~~~~g~~vlI~G~g~~G~~a~~~a~~~g~~-v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~--~~~~~~--~~ 244 (299)
+++.... ++++++|||+|+|++|++++|+|+..|++ |+++++++++.+.+ +++|+++++++++.+ .+.+.. .+
T Consensus 154 ~~l~~~~-~~~g~~vlV~G~G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~-~~~ga~~~i~~~~~~~~~~~~~~~~~~ 231 (339)
T cd08239 154 HALRRVG-VSGRDTVLVVGAGPVGLGALMLARALGAEDVIGVDPSPERLELA-KALGADFVINSGQDDVQEIRELTSGAG 231 (339)
T ss_pred HHHHhcC-CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHhCCCEEEcCCcchHHHHHHHhCCCC
Confidence 9997665 48999999999999999999999999997 99999998888887 789999999876543 223332 47
Q ss_pred ccEEEEcCCCchhHHHHHHhcccCcEEEEEcCCCceeeCh-hhhhcCCeeeeeec
Q 022313 245 LDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPSKVKFSP-ASLNIGNAPLFRFK 298 (299)
Q Consensus 245 ~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~-~~l~~~~~~~~g~~ 298 (299)
+|++||++|+......++++++++|+++.+|.....+++. ..++.|++++.|+.
T Consensus 232 ~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~ 286 (339)
T cd08239 232 ADVAIECSGNTAARRLALEAVRPWGRLVLVGEGGELTIEVSNDLIRKQRTLIGSW 286 (339)
T ss_pred CCEEEECCCCHHHHHHHHHHhhcCCEEEEEcCCCCcccCcHHHHHhCCCEEEEEe
Confidence 9999999999876688999999999999999873334443 46778999998864
No 18
>PLN02827 Alcohol dehydrogenase-like
Probab=100.00 E-value=9.1e-42 Score=311.48 Aligned_cols=286 Identities=21% Similarity=0.305 Sum_probs=235.2
Q ss_pred ccceEEeeeCCCCcccceeeecCCCCCCcEEEEEceeecccchhhhhccCCCCCCCCccccccccEEEEEecCCCCCccc
Q 022313 8 KDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKV 87 (299)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~ 87 (299)
.+|+++.+.+.++.+++++++.|+++++||+|||+++++|++|++.+.+.. .+|.++|||++|+|+++|+++++|++
T Consensus 11 ~~mka~~~~~~~~~~~~~e~~~P~~~~~eVlVkv~~~gic~sD~~~~~g~~---~~p~i~GhE~~G~V~~vG~~v~~~~~ 87 (378)
T PLN02827 11 ITCRAAVAWGAGEALVMEEVEVSPPQPLEIRIKVVSTSLCRSDLSAWESQA---LFPRIFGHEASGIVESIGEGVTEFEK 87 (378)
T ss_pred ceeEEEEEecCCCCceEEEeecCCCCCCEEEEEEEEEecChhHHHHhcCCC---CCCeeecccceEEEEEcCCCCcccCC
Confidence 356677776666678999999999999999999999999999999887642 35789999999999999999999999
Q ss_pred CCEEEEeccccCCCCCccccCCCCcccccccccccccc---------CCC-----CccCCcceeeEEeecceEEEcCCCC
Q 022313 88 GDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAID---------ADG-----TITKGGYSSYIVVHERYCYKIANDY 153 (299)
Q Consensus 88 Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~---------~~g-----~~~~g~~~~~~~~~~~~~~~~p~~~ 153 (299)
||+|.+.+. .+|+.|.+|+++.+++|.+......+.. ..| ....|+|+||+.+|++.++++|+++
T Consensus 88 GdrV~~~~~-~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~G~~aeyv~v~~~~~~~iP~~l 166 (378)
T PLN02827 88 GDHVLTVFT-GECGSCRHCISGKSNMCQVLGLERKGVMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVDPLA 166 (378)
T ss_pred CCEEEEecC-CCCCCChhhhCcCcccccCccccccccccCCCcccccccCcccccccccccceeeEEechhheEECCCCC
Confidence 999987654 4899999999999999987532111110 001 0124899999999999999999999
Q ss_pred CcccccccchhhHHHHHHhhhccCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCchHHHHHHHhcCCCEEEeC
Q 022313 154 PLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKFVVS 232 (299)
Q Consensus 154 ~~~~aa~~~~~~~ta~~al~~~~~~~~g~~vlI~G~g~~G~~a~~~a~~~g~-~v~~~~~~~~~~~~~~~~~g~~~v~~~ 232 (299)
++++++.+.+++.++|+++.....++++++|||+|+|++|++++|+|+..|+ .|+++++++++.+.+ +++|++++++.
T Consensus 167 ~~~~aa~l~~~~~~a~~~~~~~~~~~~g~~VlV~G~G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a-~~lGa~~~i~~ 245 (378)
T PLN02827 167 PLHKICLLSCGVAAGLGAAWNVADVSKGSSVVIFGLGTVGLSVAQGAKLRGASQIIGVDINPEKAEKA-KTFGVTDFINP 245 (378)
T ss_pred CHHHhhhhcchhHhhHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH-HHcCCcEEEcc
Confidence 9999999999999999877665667999999999999999999999999999 577777788888877 78999999887
Q ss_pred CCH-----HHHHHhc-CCccEEEEcCCCchhHHHHHHhcccC-cEEEEEcCC-CceeeCh-hhhhcCCeeeeeec
Q 022313 233 SDL-----EQMKALG-KSLDFIIDTASGDHPFDAYMSLLKVA-GVYVLVGFP-SKVKFSP-ASLNIGNAPLFRFK 298 (299)
Q Consensus 233 ~~~-----~~~~~~~-~~~d~v~d~~g~~~~~~~~~~~l~~~-G~~v~~g~~-~~~~~~~-~~l~~~~~~~~g~~ 298 (299)
++. +.+.++. +++|++||++|....+..+++.++++ |+++.+|.. ....+++ ..++.|+++++|+.
T Consensus 246 ~~~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~l~~l~~g~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~ 320 (378)
T PLN02827 246 NDLSEPIQQVIKRMTGGGADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKAKPEVSAHYGLFLSGRTLKGSL 320 (378)
T ss_pred cccchHHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhccCCCEEEEECCcCCCccccccHHHHhcCceEEeee
Confidence 642 2233333 48999999999876689999999998 999999988 4445544 46788999999863
No 19
>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i
Probab=100.00 E-value=1e-41 Score=310.09 Aligned_cols=286 Identities=26% Similarity=0.415 Sum_probs=240.0
Q ss_pred ccceEEeeeCCCCcccceeeecCCCCCCcEEEEEceeecccchhhhhccCCCCCCCCccccccccEEEEEecCCCCCccc
Q 022313 8 KDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKV 87 (299)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~ 87 (299)
|+++++.+...++.+++++++.|++.++||+|||+++++|++|++.+.|..+ ..+|.++|||++|+|+++|++++++++
T Consensus 1 ~~~ka~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~gi~~sD~~~~~g~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~~ 79 (365)
T cd08277 1 IKCKAAVAWEAGKPLVIEEIEVAPPKANEVRIKMLATSVCHTDILAIEGFKA-TLFPVILGHEGAGIVESVGEGVTNLKP 79 (365)
T ss_pred CccEEEEEccCCCCcEEEEEECCCCCCCEEEEEEEEEeechhhHHHhcCCCC-CCCCeecccceeEEEEeeCCCCccCCC
Confidence 4567777766667789999999999999999999999999999999888664 456889999999999999999999999
Q ss_pred CCEEEEeccccCCCCCccccCCCCccccccccccccccCCCC-------------ccCCcceeeEEeecceEEEcCCCCC
Q 022313 88 GDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGT-------------ITKGGYSSYIVVHERYCYKIANDYP 154 (299)
Q Consensus 88 Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~g~-------------~~~g~~~~~~~~~~~~~~~~p~~~~ 154 (299)
||+|...+. .+|++|.+|..+.+.+|.+..+...|...++. ...|+|+||+.++++.++++|++++
T Consensus 80 GdrV~~~~~-~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~ae~~~v~~~~~~~lP~~l~ 158 (365)
T cd08277 80 GDKVIPLFI-GQCGECSNCRSGKTNLCQKYRANESGLMPDGTSRFTCKGKKIYHFLGTSTFSQYTVVDENYVAKIDPAAP 158 (365)
T ss_pred CCEEEECCC-CCCCCCchhcCcCcccCcCccccccccccCCccccccCCcccccccccccceeeEEEchhheEECCCCCC
Confidence 999976544 59999999999999999986544333332210 1258999999999999999999999
Q ss_pred cccccccchhhHHHHHHhhhccCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCchHHHHHHHhcCCCEEEeCC
Q 022313 155 LALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKFVVSS 233 (299)
Q Consensus 155 ~~~aa~~~~~~~ta~~al~~~~~~~~g~~vlI~G~g~~G~~a~~~a~~~g~-~v~~~~~~~~~~~~~~~~~g~~~v~~~~ 233 (299)
+++++.+++++.|+|+++.....++++++|+|+|+|++|++++|+|+..|+ +|+++++++++.+.+ +++|++++++..
T Consensus 159 ~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~-~~~ga~~~i~~~ 237 (365)
T cd08277 159 LEHVCLLGCGFSTGYGAAWNTAKVEPGSTVAVFGLGAVGLSAIMGAKIAGASRIIGVDINEDKFEKA-KEFGATDFINPK 237 (365)
T ss_pred HHHhhHhcchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH-HHcCCCcEeccc
Confidence 999999999999999987666667999999999999999999999999999 799999998888888 689999998766
Q ss_pred CH-----HHHHHh-cCCccEEEEcCCCchhHHHHHHhcccC-cEEEEEcCC--CceeeChhhhhcCCeeeeee
Q 022313 234 DL-----EQMKAL-GKSLDFIIDTASGDHPFDAYMSLLKVA-GVYVLVGFP--SKVKFSPASLNIGNAPLFRF 297 (299)
Q Consensus 234 ~~-----~~~~~~-~~~~d~v~d~~g~~~~~~~~~~~l~~~-G~~v~~g~~--~~~~~~~~~l~~~~~~~~g~ 297 (299)
+. +.+.+. .+++|++||++|+...+..++++++++ |+++.+|.. ...++++..++. ++++.|+
T Consensus 238 ~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~i~g~ 309 (365)
T cd08277 238 DSDKPVSEVIREMTGGGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPPGAELSIRPFQLIL-GRTWKGS 309 (365)
T ss_pred cccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhcccCCCEEEEEcCCCccccccCHhHHhh-CCEEEee
Confidence 42 223333 358999999999877689999999885 999999987 345667766664 7888775
No 20
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=100.00 E-value=3.5e-42 Score=306.54 Aligned_cols=256 Identities=28% Similarity=0.397 Sum_probs=221.8
Q ss_pred cceEEeeeCCCCcccceeeecCCCCCCcEEEEEceeecccchhhhhccC-CCCCCCCccccccccEEEEEecCCCCCccc
Q 022313 9 DCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNK-HGDSKYPLVPGHEIVGIVKEVGHNVSRFKV 87 (299)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~D~~~~~g~-~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~ 87 (299)
++..+.-...+..+++.+.+.|.|.++||||||+++++|+.|.+.+.|. .+..+.|.++|.|++|+|+++|++++.|++
T Consensus 2 ka~~~~~~g~~~~l~~~e~~~P~p~~geVlVrV~a~gvN~~D~~~r~G~~~~~~~~P~i~G~d~aG~V~avG~~V~~~~~ 81 (326)
T COG0604 2 KAVVVEEFGGPEVLKVVEVPEPEPGPGEVLVRVKAAGVNPIDVLVRQGLAPPVRPLPFIPGSEAAGVVVAVGSGVTGFKV 81 (326)
T ss_pred eEEEEeccCCCceeEEEecCCCCCCCCeEEEEEEEeecChHHHHhccCCCCCCCCCCCcccceeEEEEEEeCCCCCCcCC
Confidence 4444444455666999999999999999999999999999999999986 334568999999999999999999999999
Q ss_pred CCEEEEeccccCCCCCccccCCCCccccccccccccccCCCCccCCcceeeEEeecceEEEcCCCCCcccccccchhhHH
Q 022313 88 GDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGIT 167 (299)
Q Consensus 88 Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~t 167 (299)
||+|..... . ...|+|+||..+|++.++++|+++|+++||+++++++|
T Consensus 82 GdrV~~~~~-------------------------------~-~~~G~~AEy~~v~a~~~~~~P~~ls~~eAAal~~~~~T 129 (326)
T COG0604 82 GDRVAALGG-------------------------------V-GRDGGYAEYVVVPADWLVPLPDGLSFEEAAALPLAGLT 129 (326)
T ss_pred CCEEEEccC-------------------------------C-CCCCcceeEEEecHHHceeCCCCCCHHHHHHHHHHHHH
Confidence 999974210 0 04699999999999999999999999999999999999
Q ss_pred HHHHhhhccCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEEeCCCHHH---HHHhc-
Q 022313 168 VYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQ---MKALG- 242 (299)
Q Consensus 168 a~~al~~~~~~~~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~---~~~~~- 242 (299)
||+++.....+++|++|||+|+ |++|.+++|+|+.+|+.+++++.++++.+.+ +++|+++++++.+.+. +++++
T Consensus 130 A~~~l~~~~~l~~g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~~~-~~lGAd~vi~y~~~~~~~~v~~~t~ 208 (326)
T COG0604 130 AWLALFDRAGLKPGETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLELL-KELGADHVINYREEDFVEQVRELTG 208 (326)
T ss_pred HHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHH-HhcCCCEEEcCCcccHHHHHHHHcC
Confidence 9999998888899999999986 9999999999999998888888888888855 8999999999887543 44444
Q ss_pred -CCccEEEEcCCCchhHHHHHHhcccCcEEEEEcCCC---ceeeChhhhhcCCeeeeeec
Q 022313 243 -KSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPS---KVKFSPASLNIGNAPLFRFK 298 (299)
Q Consensus 243 -~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~---~~~~~~~~l~~~~~~~~g~~ 298 (299)
+++|+|+|++|+.. +..++++|+++|+++.+|... ..++++..++.++++++|+.
T Consensus 209 g~gvDvv~D~vG~~~-~~~~l~~l~~~G~lv~ig~~~g~~~~~~~~~~~~~~~~~~~g~~ 267 (326)
T COG0604 209 GKGVDVVLDTVGGDT-FAASLAALAPGGRLVSIGALSGGPPVPLNLLPLLGKRLTLRGVT 267 (326)
T ss_pred CCCceEEEECCCHHH-HHHHHHHhccCCEEEEEecCCCCCccccCHHHHhhccEEEEEec
Confidence 47999999999987 888999999999999999973 55677788888999999875
No 21
>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim
Probab=100.00 E-value=4.1e-41 Score=306.45 Aligned_cols=286 Identities=25% Similarity=0.373 Sum_probs=232.8
Q ss_pred cceEEeeeCCCCcccceeeecCCCCCCcEEEEEceeecccchhhhhccCCCCCCCCccccccccEEEEEecCCCCCcccC
Q 022313 9 DCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVG 88 (299)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~G 88 (299)
+++++.+...++++++++++.|++.++||+|||+++++|++|++.+.|.++...+|.++|||++|+|+++|+++++|++|
T Consensus 2 ~~~a~~~~~~~~~~~~~~~~~P~~~~~eVlIrv~a~gi~~~D~~~~~g~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~vG 81 (368)
T cd08300 2 TCKAAVAWEAGKPLSIEEVEVAPPKAGEVRIKILATGVCHTDAYTLSGADPEGLFPVILGHEGAGIVESVGEGVTSVKPG 81 (368)
T ss_pred cceEEEEecCCCCcEEEEeecCCCCCCEEEEEEEEEEechhhHHHhcCCCccCCCCceeccceeEEEEEeCCCCccCCCC
Confidence 34556655666789999999999999999999999999999999988876545678999999999999999999999999
Q ss_pred CEEEEeccccCCCCCccccCCCCccccccccc-cccccCCC-------------CccCCcceeeEEeecceEEEcCCCCC
Q 022313 89 DHVGVGTYVNSCRDCEYCNDGLEVHCARSVYT-FNAIDADG-------------TITKGGYSSYIVVHERYCYKIANDYP 154 (299)
Q Consensus 89 d~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~-~~~~~~~g-------------~~~~g~~~~~~~~~~~~~~~~p~~~~ 154 (299)
|+|...+. .+|++|.+|++++++.|.+.... ..|...+| ....|+|+||+.++++.++++|++++
T Consensus 82 drV~~~~~-~~cg~C~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~l~ 160 (368)
T cd08300 82 DHVIPLYT-PECGECKFCKSGKTNLCQKIRATQGKGLMPDGTSRFSCKGKPIYHFMGTSTFSEYTVVAEISVAKINPEAP 160 (368)
T ss_pred CEEEEcCC-CCCCCChhhcCCCcCcCCCccccccccccCCCccccccCCcccccccccccceeEEEEchhceEeCCCCCC
Confidence 99987544 59999999999999999875321 01111111 01247999999999999999999999
Q ss_pred cccccccchhhHHHHHHhhhccCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCchHHHHHHHhcCCCEEEeCC
Q 022313 155 LALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKFVVSS 233 (299)
Q Consensus 155 ~~~aa~~~~~~~ta~~al~~~~~~~~g~~vlI~G~g~~G~~a~~~a~~~g~-~v~~~~~~~~~~~~~~~~~g~~~v~~~~ 233 (299)
+++++.+++++.|+|+++.....++++++|||+|+|++|++++|+|+..|+ +|+++++++++++.+ +++|+++++++.
T Consensus 161 ~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~-~~lGa~~~i~~~ 239 (368)
T cd08300 161 LDKVCLLGCGVTTGYGAVLNTAKVEPGSTVAVFGLGAVGLAVIQGAKAAGASRIIGIDINPDKFELA-KKFGATDCVNPK 239 (368)
T ss_pred hhhhhhhccchhhhHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH-HHcCCCEEEccc
Confidence 999999999999999988666667999999999999999999999999999 799999999998888 789999999876
Q ss_pred CH-----HHHHHhc-CCccEEEEcCCCchhHHHHHHhcccC-cEEEEEcCC-C--ceeeChhhhhcCCeeeeee
Q 022313 234 DL-----EQMKALG-KSLDFIIDTASGDHPFDAYMSLLKVA-GVYVLVGFP-S--KVKFSPASLNIGNAPLFRF 297 (299)
Q Consensus 234 ~~-----~~~~~~~-~~~d~v~d~~g~~~~~~~~~~~l~~~-G~~v~~g~~-~--~~~~~~~~l~~~~~~~~g~ 297 (299)
+. +.+.++. +++|+|||++|+...+..++++++++ |+++.+|.. . ...+++..+. ++.++.|+
T Consensus 240 ~~~~~~~~~v~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~g~ 312 (368)
T cd08300 240 DHDKPIQQVLVEMTDGGVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAAGQEISTRPFQLV-TGRVWKGT 312 (368)
T ss_pred ccchHHHHHHHHHhCCCCcEEEECCCChHHHHHHHHhhccCCCeEEEEccCCCCCccccCHHHHh-hcCeEEEE
Confidence 53 1233332 48999999999876689999999886 999999987 2 2344444444 33455553
No 22
>cd08230 glucose_DH Glucose dehydrogenase. Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai
Probab=100.00 E-value=1.1e-40 Score=302.16 Aligned_cols=268 Identities=24% Similarity=0.268 Sum_probs=214.4
Q ss_pred cccceeeecCCCCCCcEEEEEceeecccchhhhhccCCCC---CCCCccccccccEEEEEecCCCCCcccCCEEEEeccc
Q 022313 21 VLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGD---SKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYV 97 (299)
Q Consensus 21 ~~~~~~~~~p~~~~~evlv~v~~~~i~~~D~~~~~g~~~~---~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~ 97 (299)
.+++++++.|++.++||||||+++++|++|++.+.|.++. ...|.++|||++|+|+++|++ ++|++||+|++.+.
T Consensus 12 ~l~~~~~p~p~~~~~evlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~i~G~e~~G~V~~vG~~-~~~~vGdrV~~~~~- 89 (355)
T cd08230 12 GVRVVDIPEPEPTPGEVLVRTLEVGVCGTDREIVAGEYGTAPPGEDFLVLGHEALGVVEEVGDG-SGLSPGDLVVPTVR- 89 (355)
T ss_pred CCeEEeCCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCCCCCCCCCeeeccccceEEEEecCC-CCCCCCCEEEeccc-
Confidence 3899999999999999999999999999999999886532 235789999999999999999 89999999987654
Q ss_pred cCCCCCccccCCCCccccccccccccccCCCCccCCcceeeEEeecceEEEcCCCCCcccccccchhhHHHHHHhhhc--
Q 022313 98 NSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRH-- 175 (299)
Q Consensus 98 ~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~al~~~-- 175 (299)
..|+.|.+|+.++++.|.+..+...|.. ...|+|+||+.++++.++++|++++ +++.+.+++.++++++...
T Consensus 90 ~~cg~C~~c~~g~~~~c~~~~~~~~g~~----~~~G~~aey~~~~~~~~~~~P~~~~--~~a~~~~p~~~~~~a~~~~~~ 163 (355)
T cd08230 90 RPPGKCLNCRIGRPDFCETGEYTERGIK----GLHGFMREYFVDDPEYLVKVPPSLA--DVGVLLEPLSVVEKAIEQAEA 163 (355)
T ss_pred cCCCcChhhhCcCcccCCCcceeccCcC----CCCccceeEEEeccccEEECCCCCC--cceeecchHHHHHHHHHHHhh
Confidence 4799999999999999987543222211 2469999999999999999999998 3444555665555544322
Q ss_pred ----cCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeC---CchHHHHHHHhcCCCEEEeCCCHHHH-HHhcCCccE
Q 022313 176 ----KMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLST---STSKKEEALSLLGADKFVVSSDLEQM-KALGKSLDF 247 (299)
Q Consensus 176 ----~~~~~g~~vlI~G~g~~G~~a~~~a~~~g~~v~~~~~---~~~~~~~~~~~~g~~~v~~~~~~~~~-~~~~~~~d~ 247 (299)
...+++++|+|+|+|++|++++|+|+..|++|+++++ ++++.+.+ +++|++.+ +..+.+.. .....++|+
T Consensus 164 ~~~~~~~~~g~~vlI~G~G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~~~-~~~Ga~~v-~~~~~~~~~~~~~~~~d~ 241 (355)
T cd08230 164 VQKRLPTWNPRRALVLGAGPIGLLAALLLRLRGFEVYVLNRRDPPDPKADIV-EELGATYV-NSSKTPVAEVKLVGEFDL 241 (355)
T ss_pred hhhhcccCCCCEEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHH-HHcCCEEe-cCCccchhhhhhcCCCCE
Confidence 1236899999999999999999999999999999987 46666666 78999874 44432211 122468999
Q ss_pred EEEcCCCchhHHHHHHhcccCcEEEEEcCC-C--ceeeC----hhhhhcCCeeeeeec
Q 022313 248 IIDTASGDHPFDAYMSLLKVAGVYVLVGFP-S--KVKFS----PASLNIGNAPLFRFK 298 (299)
Q Consensus 248 v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~-~--~~~~~----~~~l~~~~~~~~g~~ 298 (299)
|||++|....+..+++.++++|+++.+|.. . ..+++ ...++.|++++.|+.
T Consensus 242 vid~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~ 299 (355)
T cd08230 242 IIEATGVPPLAFEALPALAPNGVVILFGVPGGGREFEVDGGELNRDLVLGNKALVGSV 299 (355)
T ss_pred EEECcCCHHHHHHHHHHccCCcEEEEEecCCCCCccccChhhhhhhHhhcCcEEEEec
Confidence 999999876689999999999999999987 3 44555 356788999999863
No 23
>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent. Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.
Probab=100.00 E-value=2e-40 Score=303.57 Aligned_cols=260 Identities=22% Similarity=0.283 Sum_probs=207.8
Q ss_pred EEeeeCCCCcccceeeecCCCC-------CCcEEEEEceeecccchhhhhccCCCCCCCCccccccccEEEEEecCCCCC
Q 022313 12 GWAARDPSGVLSPYSFNRRAVG-------SDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSR 84 (299)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~p~~~-------~~evlv~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~ 84 (299)
++.+ ..++++++++++.|+++ ++||||||++++||++|++++.|... ...|.++|||++|+|+++|+++.+
T Consensus 5 a~v~-~~~~~~~~~e~~~P~~~~~~~~~~~~eVlVkv~a~gIcgsD~~~~~g~~~-~~~p~i~GhE~~G~V~~vG~~V~~ 82 (393)
T TIGR02819 5 GVVY-LGPGKVEVQDIDYPKLELPDGRKCEHGVILKVVTTNICGSDQHMVRGRTT-APTGLVLGHEITGEVIEKGRDVEF 82 (393)
T ss_pred EEEE-ecCCceeEEeccCCcccCCCccCCCCeEEEEEEEeeecHHHHHHHCCCCC-CCCCccccceeEEEEEEEcCcccc
Confidence 4444 35667999999999874 68999999999999999999987653 356899999999999999999999
Q ss_pred cccCCEEEEeccccCCCCCccccCCCCccccccccc----cccccCCCCccCCcceeeEEeecc--eEEEcCCCCCc---
Q 022313 85 FKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYT----FNAIDADGTITKGGYSSYIVVHER--YCYKIANDYPL--- 155 (299)
Q Consensus 85 ~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~----~~~~~~~g~~~~g~~~~~~~~~~~--~~~~~p~~~~~--- 155 (299)
|++||||++.+. .+|+.|.+|++|++++|.+.... +.|....+ ...|+|+||+.+|+. +++++|++++.
T Consensus 83 ~~vGdrV~~~~~-~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~-~~~G~~aey~~v~~~~~~l~~vP~~~~~~~~ 160 (393)
T TIGR02819 83 IKIGDIVSVPFN-IACGRCRNCKEGHTGVCLNVNPARAGAAYGYVDMG-GWVGGQSEYVMVPYADFNLLKFPDRDQALEK 160 (393)
T ss_pred ccCCCEEEEecc-cCCCCChHHHCcCcccCcCCCCCCccceecccccC-CCCCceEEEEEechhhCceEECCCccccccc
Confidence 999999988765 48999999999999999975321 11110001 136999999999964 79999998754
Q ss_pred -ccccccchhhHHHHHHhhhccCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEE-EeCCchHHHHHHHhcCCCEEEeCC
Q 022313 156 -ALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTV-LSTSTSKKEEALSLLGADKFVVSS 233 (299)
Q Consensus 156 -~~aa~~~~~~~ta~~al~~~~~~~~g~~vlI~G~g~~G~~a~~~a~~~g~~v~~-~~~~~~~~~~~~~~~g~~~v~~~~ 233 (299)
..++.+.+++.++|+++... .++++++|+|.|+|++|++++|+|+..|+++++ +++++++++.+ +++|++.+.+..
T Consensus 161 ~~~~a~l~~~~~ta~~a~~~~-~~~~g~~VlV~G~G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~~~a-~~~Ga~~v~~~~ 238 (393)
T TIGR02819 161 IRDLTMLSDIFPTGYHGAVTA-GVGPGSTVYIAGAGPVGLAAAASAQLLGAAVVIVGDLNPARLAQA-RSFGCETVDLSK 238 (393)
T ss_pred ccceeeeccHHHHHHHHHHhc-CCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHH-HHcCCeEEecCC
Confidence 35678888999999998764 459999999998999999999999999996544 45666677777 689997544333
Q ss_pred CH---HHHHHhc--CCccEEEEcCCCc--------------hhHHHHHHhcccCcEEEEEcCC
Q 022313 234 DL---EQMKALG--KSLDFIIDTASGD--------------HPFDAYMSLLKVAGVYVLVGFP 277 (299)
Q Consensus 234 ~~---~~~~~~~--~~~d~v~d~~g~~--------------~~~~~~~~~l~~~G~~v~~g~~ 277 (299)
+. +.+.++. .++|++||++|.+ .+++.++++++++|+++.+|..
T Consensus 239 ~~~~~~~v~~~~~~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~G~~ 301 (393)
T TIGR02819 239 DATLPEQIEQILGEPEVDCAVDCVGFEARGHGHDGKKEAPATVLNSLMEVTRVGGAIGIPGLY 301 (393)
T ss_pred cccHHHHHHHHcCCCCCcEEEECCCCccccccccccccchHHHHHHHHHHhhCCCEEEEeeec
Confidence 22 3344443 4799999999986 3699999999999999999986
No 24
>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase. Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=100.00 E-value=7.7e-40 Score=296.03 Aligned_cols=267 Identities=27% Similarity=0.421 Sum_probs=226.9
Q ss_pred CcccceeeecCCCCCCcEEEEEceeecccchhhhhccC-CCCCCCCccccccccEEEEEecCCCCCcccCCEEEEecccc
Q 022313 20 GVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNK-HGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVN 98 (299)
Q Consensus 20 ~~~~~~~~~~p~~~~~evlv~v~~~~i~~~D~~~~~g~-~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~ 98 (299)
+.+++++.+.|++.++||+|||+++++|++|++.+.+. ......|.++|||++|+|+++|+++..+ +||+|++.+..
T Consensus 9 ~~~~~~~~p~P~~~~~evlVrv~~~gic~sD~~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~-~GdrV~~~~~~- 86 (349)
T TIGR03201 9 KPMVKTRVEIPELGAGDVVVKVAGCGVCHTDLSYYYMGVRTNHALPLALGHEISGRVIQAGAGAASW-IGKAVIVPAVI- 86 (349)
T ss_pred CCceEEeccCCCCCCCeEEEEEEEEeecccchHHHcCCCCccCCCCeeccccceEEEEEeCCCcCCC-CCCEEEECCCC-
Confidence 34888999999999999999999999999999877443 3233568899999999999999999877 99999876664
Q ss_pred CCCCCccccCCCCccccccccccccccCCCCccCCcceeeEEeecceEEEcCC------CCCcccccccchhhHHHHHHh
Q 022313 99 SCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIAN------DYPLALAAPLLCAGITVYTPM 172 (299)
Q Consensus 99 ~c~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~------~~~~~~aa~~~~~~~ta~~al 172 (299)
+|++|.+|+.+++++|....+ . |....|+|+||+.+|++.++++|+ ++++++++.+.+++.++|+++
T Consensus 87 ~cg~c~~c~~g~~~~c~~~~~--~-----g~~~~G~~ae~~~v~~~~~~~ip~~~~~~~~~~~~~~a~~~~~~~ta~~a~ 159 (349)
T TIGR03201 87 PCGECELCKTGRGTICRAQKM--P-----GNDMQGGFASHIVVPAKGLCVVDEARLAAAGLPLEHVSVVADAVTTPYQAA 159 (349)
T ss_pred CCCCChhhhCcCcccCCCCCc--c-----CcCCCCcccceEEechHHeEECCcccccccCCCHHHhhhhcchHHHHHHHH
Confidence 999999999999999976432 1 223469999999999999999999 899999999999999999998
Q ss_pred hhccCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEEeCCCH---HH---HHHhc--CC
Q 022313 173 MRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDL---EQ---MKALG--KS 244 (299)
Q Consensus 173 ~~~~~~~~g~~vlI~G~g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~---~~---~~~~~--~~ 244 (299)
... .++++++|+|+|+|++|++++|+|+..|++|+++++++++++.+ +++|++++++..+. +. +.+++ .+
T Consensus 160 ~~~-~~~~g~~VlV~G~G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~~-~~~Ga~~~i~~~~~~~~~~~~~~~~~t~~~g 237 (349)
T TIGR03201 160 VQA-GLKKGDLVIVIGAGGVGGYMVQTAKAMGAAVVAIDIDPEKLEMM-KGFGADLTLNPKDKSAREVKKLIKAFAKARG 237 (349)
T ss_pred Hhc-CCCCCCEEEEECCCHHHHHHHHHHHHcCCeEEEEcCCHHHHHHH-HHhCCceEecCccccHHHHHHHHHhhcccCC
Confidence 764 45999999999999999999999999999999999999998888 68999998886542 12 22332 46
Q ss_pred cc----EEEEcCCCchhHHHHHHhcccCcEEEEEcCC-CceeeChhhhhcCCeeeeee
Q 022313 245 LD----FIIDTASGDHPFDAYMSLLKVAGVYVLVGFP-SKVKFSPASLNIGNAPLFRF 297 (299)
Q Consensus 245 ~d----~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~-~~~~~~~~~l~~~~~~~~g~ 297 (299)
+| ++||++|+......++++++++|+++.+|.. ...++++.+++.+++++.|.
T Consensus 238 ~d~~~d~v~d~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~g~ 295 (349)
T TIGR03201 238 LRSTGWKIFECSGSKPGQESALSLLSHGGTLVVVGYTMAKTEYRLSNLMAFHARALGN 295 (349)
T ss_pred CCCCcCEEEECCCChHHHHHHHHHHhcCCeEEEECcCCCCcccCHHHHhhcccEEEEE
Confidence 65 8999999987788899999999999999988 55678888888888888874
No 25
>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal
Probab=100.00 E-value=4.1e-39 Score=289.50 Aligned_cols=278 Identities=32% Similarity=0.592 Sum_probs=241.4
Q ss_pred eEEeeeCCCCcccceeeecCCCCCCcEEEEEceeecccchhhhhccCCCCCCCCccccccccEEEEEecCCCCCcccCCE
Q 022313 11 LGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDH 90 (299)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~ 90 (299)
+++.+..+.+.+++++++.|++.++||+||+.++++|++|.+.+.|..+....|.++|||++|+|+++|+++.++++||+
T Consensus 2 ~a~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd~ 81 (333)
T cd08296 2 KAVQVTEPGGPLELVERDVPLPGPGEVLIKVEACGVCHSDAFVKEGAMPGLSYPRVPGHEVVGRIDAVGEGVSRWKVGDR 81 (333)
T ss_pred eEEEEccCCCCceEEeccCCCCCCCEEEEEEEEEecchHHHHHHhCCCCCCCCCcccCcceeEEEEEECCCCccCCCCCE
Confidence 45666555467999999999999999999999999999999988886643456889999999999999999999999999
Q ss_pred EEEeccccCCCCCccccCCCCccccccccccccccCCCCccCCcceeeEEeecceEEEcCCCCCcccccccchhhHHHHH
Q 022313 91 VGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYT 170 (299)
Q Consensus 91 V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~ 170 (299)
|++.+....|+.|++|..++++.|....+. |....|++++|+.++.+.++++|+++++.+++.+++++.++|+
T Consensus 82 V~~~~~~~~~~~~~~~~~g~~~~c~~~~~~-------~~~~~g~~a~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~ 154 (333)
T cd08296 82 VGVGWHGGHCGTCDACRRGDFVHCENGKVT-------GVTRDGGYAEYMLAPAEALARIPDDLDAAEAAPLLCAGVTTFN 154 (333)
T ss_pred EEeccccCCCCCChhhhCcCcccCCCCCcc-------CcccCCcceeEEEEchhheEeCCCCCCHHHhhhhhhhhHHHHH
Confidence 988766678999999999999999976532 2223589999999999999999999999999999999999999
Q ss_pred HhhhccCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEEeCCCHHH---HHHhcCCccE
Q 022313 171 PMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQ---MKALGKSLDF 247 (299)
Q Consensus 171 al~~~~~~~~g~~vlI~G~g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~---~~~~~~~~d~ 247 (299)
++... .++++++|+|+|+|.+|++++++|+..|++|+++++++++++.+ +++|++++++....+. +.+. +++|+
T Consensus 155 ~~~~~-~~~~~~~vlV~g~g~iG~~~~~~a~~~G~~vi~~~~~~~~~~~~-~~~g~~~~i~~~~~~~~~~~~~~-~~~d~ 231 (333)
T cd08296 155 ALRNS-GAKPGDLVAVQGIGGLGHLAVQYAAKMGFRTVAISRGSDKADLA-RKLGAHHYIDTSKEDVAEALQEL-GGAKL 231 (333)
T ss_pred HHHhc-CCCCCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCChHHHHHH-HHcCCcEEecCCCccHHHHHHhc-CCCCE
Confidence 98776 66999999999999999999999999999999999998888888 7899999988765433 2223 57999
Q ss_pred EEEcCCCchhHHHHHHhcccCcEEEEEcCC-CceeeChhhhhcCCeeeeeec
Q 022313 248 IIDTASGDHPFDAYMSLLKVAGVYVLVGFP-SKVKFSPASLNIGNAPLFRFK 298 (299)
Q Consensus 248 v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~-~~~~~~~~~l~~~~~~~~g~~ 298 (299)
++|++|....+..++++++++|+++.+|.. ...+++...++.+++++.|+.
T Consensus 232 vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~ 283 (333)
T cd08296 232 ILATAPNAKAISALVGGLAPRGKLLILGAAGEPVAVSPLQLIMGRKSIHGWP 283 (333)
T ss_pred EEECCCchHHHHHHHHHcccCCEEEEEecCCCCCCcCHHHHhhcccEEEEeC
Confidence 999997666689999999999999999988 667788888889999999863
No 26
>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase. NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (
Probab=100.00 E-value=1.7e-39 Score=292.75 Aligned_cols=268 Identities=15% Similarity=0.153 Sum_probs=211.9
Q ss_pred ccceEEeeeCCCCcccceeeecCCCCCCcEEEEEceeecccchhhhhccCCCC----CCCCccccccccEEEEEecCCCC
Q 022313 8 KDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGD----SKYPLVPGHEIVGIVKEVGHNVS 83 (299)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~D~~~~~g~~~~----~~~p~~lG~e~~G~V~~vG~~v~ 83 (299)
|+.+++.+ ..++.+++++.+.|+ +++||+|||+++|||++|++.+.|.+.. ..+|.++|||++|+|+++|.+
T Consensus 1 ~~~~~~~~-~~~~~~~~~~~~~P~-~~~eVlVkv~a~gIc~sD~~~~~G~~~~~~~~~~~P~i~GhE~~G~V~~~g~~-- 76 (341)
T cd08237 1 MINQVYRL-VRPKFFEVTYEEENL-REDWVIVRPTYLSICHADQRYYQGNRSPEALKKKLPMALIHEGIGVVVSDPTG-- 76 (341)
T ss_pred CcccceEE-eccceEEEeecCCCC-CCCeEEEEEEEEEEcCccHHHHcCCCCcccccCCCCeeccceeEEEEEeeCCC--
Confidence 34555666 366789999999995 9999999999999999999999886532 357999999999999998764
Q ss_pred CcccCCEEEEeccccCCCCCccccCCCCccccccccccccccCCCCccCCcceeeEEeecceEEEcCCCCCcccccccch
Q 022313 84 RFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLC 163 (299)
Q Consensus 84 ~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~ 163 (299)
.|++||+|.+.+.. +|+ |..|. ..+.|.+..+. |....|+|+||+.+|++.++++|+++++++|+ +..
T Consensus 77 ~~~vGdrV~~~~~~-~~~-~~~~~--~~~~c~~~~~~-------g~~~~G~~aey~~v~~~~~~~vP~~l~~~~aa-~~~ 144 (341)
T cd08237 77 TYKVGTKVVMVPNT-PVE-KDEII--PENYLPSSRFR-------SSGYDGFMQDYVFLPPDRLVKLPDNVDPEVAA-FTE 144 (341)
T ss_pred ccCCCCEEEECCCC-Cch-hcccc--hhccCCCccee-------EecCCCceEEEEEEchHHeEECCCCCChHHhh-hhc
Confidence 69999999886654 476 44553 45667654321 12245999999999999999999999998876 445
Q ss_pred hhHHHHHHhhhcc--CCCCCCEEEEEcCChHHHHHHHHHHH-CC-CeEEEEeCCchHHHHHHHhcCCCEEEeCCCHHHHH
Q 022313 164 AGITVYTPMMRHK--MNQPGKSLGVIGLGGLGHMAVKFGKA-FG-LNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMK 239 (299)
Q Consensus 164 ~~~ta~~al~~~~--~~~~g~~vlI~G~g~~G~~a~~~a~~-~g-~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~ 239 (299)
++.++|+++.... .++++++|+|+|+|++|++++|+++. .| .+|+++++++++++.+ ++.+.+..++ +...
T Consensus 145 ~~~~a~~a~~~~~~~~~~~g~~VlV~G~G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~~a-~~~~~~~~~~----~~~~ 219 (341)
T cd08237 145 LVSVGVHAISRFEQIAHKDRNVIGVWGDGNLGYITALLLKQIYPESKLVVFGKHQEKLDLF-SFADETYLID----DIPE 219 (341)
T ss_pred hHHHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHhcCCCcEEEEeCcHhHHHHH-hhcCceeehh----hhhh
Confidence 8888899886432 34889999999999999999999986 55 4899999998888887 4566554321 1111
Q ss_pred HhcCCccEEEEcCCC---chhHHHHHHhcccCcEEEEEcCC-CceeeChhhhhcCCeeeeeec
Q 022313 240 ALGKSLDFIIDTASG---DHPFDAYMSLLKVAGVYVLVGFP-SKVKFSPASLNIGNAPLFRFK 298 (299)
Q Consensus 240 ~~~~~~d~v~d~~g~---~~~~~~~~~~l~~~G~~v~~g~~-~~~~~~~~~l~~~~~~~~g~~ 298 (299)
..++|+|||++|+ ..++..++++++++|+++.+|.. ...++++..++.|+++++|+.
T Consensus 220 --~~g~d~viD~~G~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~~~i~g~~ 280 (341)
T cd08237 220 --DLAVDHAFECVGGRGSQSAINQIIDYIRPQGTIGLMGVSEYPVPINTRMVLEKGLTLVGSS 280 (341)
T ss_pred --ccCCcEEEECCCCCccHHHHHHHHHhCcCCcEEEEEeecCCCcccCHHHHhhCceEEEEec
Confidence 1369999999995 34688999999999999999987 566788888999999999863
No 27
>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH). This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino
Probab=100.00 E-value=2.4e-38 Score=287.53 Aligned_cols=284 Identities=26% Similarity=0.361 Sum_probs=237.4
Q ss_pred eEEeeeCCCCcccceeeecCCCCCCcEEEEEceeecccchhhhhccCCCCCCCCccccccccEEEEEecCCCCC------
Q 022313 11 LGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSR------ 84 (299)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~------ 84 (299)
+++.+.+..+.+++++++.|+++++||+|||.++++|++|.+.+.|.++....|.++|||++|+|+++|+++..
T Consensus 2 ka~~~~~~~~~l~~~~~~~p~~~~~evlV~v~a~~l~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~~~~ 81 (361)
T cd08231 2 RAAVLTGPGKPLEIREVPLPDLEPGAVLVRVRLAGVCGSDVHTVAGRRPRVPLPIILGHEGVGRVVALGGGVTTDVAGEP 81 (361)
T ss_pred eEEEEcCCCCCCEEEeccCCCCCCCeEEEEEEEEeecCccHHHhcCCCCCCCCCcccccCCceEEEEeCCCccccccCCc
Confidence 45566555558999999999999999999999999999999988887653457889999999999999999986
Q ss_pred cccCCEEEEeccccCCCCCccccCCCCccccccccccccccCC--CCccCCcceeeEEeecc-eEEEcCCCCCccccccc
Q 022313 85 FKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDAD--GTITKGGYSSYIVVHER-YCYKIANDYPLALAAPL 161 (299)
Q Consensus 85 ~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~g~~~~~~~~~~~-~~~~~p~~~~~~~aa~~ 161 (299)
|++||+|...+.. +|+.|.+|+.+.++.|....+. |...+ +....|+|++|+.++++ .++++|++++...++.+
T Consensus 82 ~~~Gd~V~~~~~~-~~~~c~~~~~~~~~~c~~~~~~--~~~~~~~~~~~~g~~a~~~~v~~~~~~~~lP~~~~~~~aa~~ 158 (361)
T cd08231 82 LKVGDRVTWSVGA-PCGRCYRCLVGDPTKCENRKKY--GHEASCDDPHLSGGYAEHIYLPPGTAIVRVPDNVPDEVAAPA 158 (361)
T ss_pred cCCCCEEEEcccC-CCCCChhHhCcCccccccchhc--cccccccCCCCCcccceEEEecCCCceEECCCCCCHHHHHHh
Confidence 9999999876554 8999999999999999876432 22110 11236999999999986 79999999999999988
Q ss_pred chhhHHHHHHhhhccCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCchHHHHHHHhcCCCEEEeCCCHH----
Q 022313 162 LCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKFVVSSDLE---- 236 (299)
Q Consensus 162 ~~~~~ta~~al~~~~~~~~g~~vlI~G~g~~G~~a~~~a~~~g~-~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~---- 236 (299)
++++.|+|+++......+++++|||+|+|++|++++++|+..|+ +|+++++++++.+.+ +++|++++++.++..
T Consensus 159 ~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~-~~~g~~~vi~~~~~~~~~~ 237 (361)
T cd08231 159 NCALATVLAALDRAGPVGAGDTVVVQGAGPLGLYAVAAAKLAGARRVIVIDGSPERLELA-REFGADATIDIDELPDPQR 237 (361)
T ss_pred cCHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHcCCCeEEcCcccccHHH
Confidence 89999999999888776799999999999999999999999999 999999888888877 689999988766421
Q ss_pred --HHHHhc--CCccEEEEcCCCchhHHHHHHhcccCcEEEEEcCC---CceeeChhhhhcCCeeeeeec
Q 022313 237 --QMKALG--KSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP---SKVKFSPASLNIGNAPLFRFK 298 (299)
Q Consensus 237 --~~~~~~--~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~---~~~~~~~~~l~~~~~~~~g~~ 298 (299)
.+.+.. +++|++||++|+...+..++++++++|+++.+|.. ...+++...++.+++++.++.
T Consensus 238 ~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (361)
T cd08231 238 RAIVRDITGGRGADVVIEASGHPAAVPEGLELLRRGGTYVLVGSVAPAGTVPLDPERIVRKNLTIIGVH 306 (361)
T ss_pred HHHHHHHhCCCCCcEEEECCCChHHHHHHHHHhccCCEEEEEcCCCCCCccccCHHHHhhcccEEEEcc
Confidence 233333 57999999999866689999999999999999976 245566666788999998863
No 28
>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional
Probab=100.00 E-value=1.4e-38 Score=287.66 Aligned_cols=274 Identities=22% Similarity=0.363 Sum_probs=222.3
Q ss_pred EEeeeCCCCcccceeeecCCC-CCCcEEEEEceeecccchhhhhccCCCCCCCCccccccccEEEEEecCCCCCcccCCE
Q 022313 12 GWAARDPSGVLSPYSFNRRAV-GSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDH 90 (299)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~p~~-~~~evlv~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~ 90 (299)
++.+. .++.+++++.+.|++ .++||+|||+++++|++|++.+.+... ...|.++|||++|+|+++|+++++|++||+
T Consensus 3 a~~~~-~~~~~~~~~~~~P~~~~~~evlV~v~~~gi~~~D~~~~~~~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~vGd~ 80 (347)
T PRK10309 3 SVVND-TDGIVRVAESPIPEIKHQDDVLVKVASSGLCGSDIPRIFKNGA-HYYPITLGHEFSGYVEAVGSGVDDLHPGDA 80 (347)
T ss_pred eEEEe-CCCceEEEECCCCCCCCCCEEEEEEEEEEEchhcHHHHhCCCC-CCCCcccccceEEEEEEeCCCCCCCCCCCE
Confidence 44443 355789999999998 589999999999999999875322111 235789999999999999999999999999
Q ss_pred EEEeccccCCCCCccccCCCCccccccccccccccCCCCccCCcceeeEEeecceEEEcCCCCCcccccccchhhHHHHH
Q 022313 91 VGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYT 170 (299)
Q Consensus 91 V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~ 170 (299)
|.+.+.. +|+.|.+|+.+.++.|....+. |....|+|+||+.++++.++++|+++++++++.+. .+.++|+
T Consensus 81 V~~~~~~-~c~~c~~c~~g~~~~c~~~~~~-------g~~~~G~~aey~~v~~~~~~~lP~~~s~~~aa~~~-~~~~~~~ 151 (347)
T PRK10309 81 VACVPLL-PCFTCPECLRGFYSLCAKYDFI-------GSRRDGGNAEYIVVKRKNLFALPTDMPIEDGAFIE-PITVGLH 151 (347)
T ss_pred EEECCCc-CCCCCcchhCcCcccCCCccee-------ccCCCCccceeEEeehHHeEECcCCCCHHHhhhhh-HHHHHHH
Confidence 9887665 7999999999999999864332 22356999999999999999999999999988764 4566788
Q ss_pred HhhhccCCCCCCEEEEEcCChHHHHHHHHHHHCCCe-EEEEeCCchHHHHHHHhcCCCEEEeCCCH--HHHHHhc--CCc
Q 022313 171 PMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLN-VTVLSTSTSKKEEALSLLGADKFVVSSDL--EQMKALG--KSL 245 (299)
Q Consensus 171 al~~~~~~~~g~~vlI~G~g~~G~~a~~~a~~~g~~-v~~~~~~~~~~~~~~~~~g~~~v~~~~~~--~~~~~~~--~~~ 245 (299)
++... .++++++|+|+|+|++|++++|+|+..|++ |+++++++++++.+ +++|++++++.++. +.+.+.. .++
T Consensus 152 ~~~~~-~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~-~~~Ga~~~i~~~~~~~~~~~~~~~~~~~ 229 (347)
T PRK10309 152 AFHLA-QGCEGKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDINSEKLALA-KSLGAMQTFNSREMSAPQIQSVLRELRF 229 (347)
T ss_pred HHHhc-CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH-HHcCCceEecCcccCHHHHHHHhcCCCC
Confidence 76544 458999999999999999999999999996 78888888888877 78999999886643 2233332 478
Q ss_pred c-EEEEcCCCchhHHHHHHhcccCcEEEEEcCC-CceeeCh---hhhhcCCeeeeeec
Q 022313 246 D-FIIDTASGDHPFDAYMSLLKVAGVYVLVGFP-SKVKFSP---ASLNIGNAPLFRFK 298 (299)
Q Consensus 246 d-~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~-~~~~~~~---~~l~~~~~~~~g~~ 298 (299)
| ++|||+|+...+..++++++++|+++.+|.. ...+++. ..++.|++++.|+.
T Consensus 230 d~~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g~~ 287 (347)
T PRK10309 230 DQLILETAGVPQTVELAIEIAGPRAQLALVGTLHHDLHLTSATFGKILRKELTVIGSW 287 (347)
T ss_pred CeEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCcccChhhhhHHhhcCcEEEEEe
Confidence 8 9999999877789999999999999999987 4333432 46788999999863
No 29
>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic
Probab=100.00 E-value=3.8e-38 Score=283.65 Aligned_cols=284 Identities=55% Similarity=0.914 Sum_probs=247.6
Q ss_pred EEeeeCCCCcccceeeecCCCCCCcEEEEEceeecccchhhhhccCCCCCCCCccccccccEEEEEecCCCCCcccCCEE
Q 022313 12 GWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHV 91 (299)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~V 91 (299)
+|+.+...+.+++++++.|++.++|++||+.++++|++|++.+.|.+.....|.++|||++|+|+++|+++..|++||+|
T Consensus 2 ~~~~~~~~~~~~~~~~~~p~~~~~evlirv~a~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~V~~vG~~v~~~~~Gd~V 81 (337)
T cd05283 2 GYAARDASGKLEPFTFERRPLGPDDVDIKITYCGVCHSDLHTLRNEWGPTKYPLVPGHEIVGIVVAVGSKVTKFKVGDRV 81 (337)
T ss_pred ceEEecCCCCceEEeccCCCCCCCeEEEEEEEecccchHHHHhcCCcCCCCCCcccCcceeeEEEEECCCCcccCCCCEE
Confidence 45666777889999999999999999999999999999999988876545568899999999999999999999999999
Q ss_pred EEeccccCCCCCccccCCCCccccccccccccccCCCCccCCcceeeEEeecceEEEcCCCCCcccccccchhhHHHHHH
Q 022313 92 GVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTP 171 (299)
Q Consensus 92 ~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~a 171 (299)
.+.+...+|++|.+|.++..++|+...+.+.|....+....|+|++|+.++.+.++++|+++++++++.+.+.+.++|++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~ 161 (337)
T cd05283 82 GVGCQVDSCGTCEQCKSGEEQYCPKGVVTYNGKYPDGTITQGGYADHIVVDERFVFKIPEGLDSAAAAPLLCAGITVYSP 161 (337)
T ss_pred EEecCCCCCCCCccccCCchhcCcchhhcccccccCCCcCCCcceeEEEechhheEECCCCCCHHHhhhhhhHHHHHHHH
Confidence 76666679999999999999999887655444443344557999999999999999999999999999999999999999
Q ss_pred hhhccCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEEeCCCHHHHHHhcCCccEEEEc
Q 022313 172 MMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDT 251 (299)
Q Consensus 172 l~~~~~~~~g~~vlI~G~g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~v~d~ 251 (299)
++... ++++++++|.|+|.+|++++++|+..|++++++++++++.+.+ +++|++++++...........+++|++||+
T Consensus 162 ~~~~~-~~~g~~vlV~g~g~vG~~~~~~a~~~G~~v~~~~~~~~~~~~~-~~~g~~~vi~~~~~~~~~~~~~~~d~v~~~ 239 (337)
T cd05283 162 LKRNG-VGPGKRVGVVGIGGLGHLAVKFAKALGAEVTAFSRSPSKKEDA-LKLGADEFIATKDPEAMKKAAGSLDLIIDT 239 (337)
T ss_pred HHhcC-CCCCCEEEEECCcHHHHHHHHHHHHcCCeEEEEcCCHHHHHHH-HHcCCcEEecCcchhhhhhccCCceEEEEC
Confidence 87776 5999999998889999999999999999999999998888888 689999998877654444556789999999
Q ss_pred CCCchhHHHHHHhcccCcEEEEEcCC-CceeeChhhhhcCCeeeeee
Q 022313 252 ASGDHPFDAYMSLLKVAGVYVLVGFP-SKVKFSPASLNIGNAPLFRF 297 (299)
Q Consensus 252 ~g~~~~~~~~~~~l~~~G~~v~~g~~-~~~~~~~~~l~~~~~~~~g~ 297 (299)
+++......++++++++|+++.+|.. ....+++..++.+++++.|+
T Consensus 240 ~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~ 286 (337)
T cd05283 240 VSASHDLDPYLSLLKPGGTLVLVGAPEEPLPVPPFPLIFGRKSVAGS 286 (337)
T ss_pred CCCcchHHHHHHHhcCCCEEEEEeccCCCCccCHHHHhcCceEEEEe
Confidence 99875588999999999999999988 44467778888899999885
No 30
>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]
Probab=100.00 E-value=6.5e-39 Score=263.10 Aligned_cols=251 Identities=24% Similarity=0.332 Sum_probs=225.9
Q ss_pred cccceEEeeeCCCCcccceeeecCCCCCCcEEEEEceeecccchhhhhccCCCCCCCCccccccccEEEEEecCCCCCcc
Q 022313 7 SKDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFK 86 (299)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~ 86 (299)
+.+...+.-.++.+.+++++.+.|+|+|+|++||-.++|+|..|.++++|.+...+.|+++|-|++|+|+++|+++++++
T Consensus 8 ~~k~i~v~e~Ggydvlk~ed~pv~~papgel~iknka~GlNfid~y~RkGlY~~~plPytpGmEaaGvVvAvG~gvtdrk 87 (336)
T KOG1197|consen 8 LLKCIVVTEFGGYDVLKLEDRPVPPPAPGELTIKNKACGLNFIDLYFRKGLYDPAPLPYTPGMEAAGVVVAVGEGVTDRK 87 (336)
T ss_pred hheEEEEeccCCcceEEEeeecCCCCCCCceEEeehhcCccHHHHHHhccccCCCCCCcCCCcccceEEEEecCCccccc
Confidence 44455555556788899999999999999999999999999999999999997788999999999999999999999999
Q ss_pred cCCEEEEeccccCCCCCccccCCCCccccccccccccccCCCCccCCcceeeEEeecceEEEcCCCCCcccccccchhhH
Q 022313 87 VGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGI 166 (299)
Q Consensus 87 ~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ 166 (299)
+||||+.. ...|.|+|+..+|...+.++|++++++.||++...++
T Consensus 88 vGDrVayl-----------------------------------~~~g~yaee~~vP~~kv~~vpe~i~~k~aaa~llq~l 132 (336)
T KOG1197|consen 88 VGDRVAYL-----------------------------------NPFGAYAEEVTVPSVKVFKVPEAITLKEAAALLLQGL 132 (336)
T ss_pred cccEEEEe-----------------------------------ccchhhheeccccceeeccCCcccCHHHHHHHHHHHH
Confidence 99999753 2459999999999999999999999999999999999
Q ss_pred HHHHHhhhccCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEEeCCCHHHHHHh----
Q 022313 167 TVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKAL---- 241 (299)
Q Consensus 167 ta~~al~~~~~~~~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~---- 241 (299)
|||..+++...+++|++|||+.+ |++|+++.|+++..|+++|.+..+.++.+.+ ++-|+++.++++.++.++++
T Consensus 133 TAy~ll~e~y~vkpGhtVlvhaAAGGVGlll~Ql~ra~~a~tI~~asTaeK~~~a-kenG~~h~I~y~~eD~v~~V~kiT 211 (336)
T KOG1197|consen 133 TAYMLLFEAYNVKPGHTVLVHAAAGGVGLLLCQLLRAVGAHTIATASTAEKHEIA-KENGAEHPIDYSTEDYVDEVKKIT 211 (336)
T ss_pred HHHHHHHHhcCCCCCCEEEEEeccccHHHHHHHHHHhcCcEEEEEeccHHHHHHH-HhcCCcceeeccchhHHHHHHhcc
Confidence 99999999999999999999976 9999999999999999999999999999988 68999999999998877665
Q ss_pred -cCCccEEEEcCCCchhHHHHHHhcccCcEEEEEcCC--CceeeChhhhhcCCeee
Q 022313 242 -GKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP--SKVKFSPASLNIGNAPL 294 (299)
Q Consensus 242 -~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~--~~~~~~~~~l~~~~~~~ 294 (299)
++|+|+++|.+|... +..++.+|++.|+++.+|+. ...++++..|-.|.+++
T Consensus 212 ngKGVd~vyDsvG~dt-~~~sl~~Lk~~G~mVSfG~asgl~~p~~l~~ls~k~l~l 266 (336)
T KOG1197|consen 212 NGKGVDAVYDSVGKDT-FAKSLAALKPMGKMVSFGNASGLIDPIPLNQLSPKALQL 266 (336)
T ss_pred CCCCceeeeccccchh-hHHHHHHhccCceEEEeccccCCCCCeehhhcChhhhhh
Confidence 379999999999986 99999999999999999988 45666666666666554
No 31
>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically
Probab=100.00 E-value=6.3e-38 Score=285.87 Aligned_cols=288 Identities=25% Similarity=0.357 Sum_probs=234.9
Q ss_pred ccccceEEeeeCCCCcccceeeecCCCCCCcEEEEEceeecccchhhhhccCCCCCCCCccccccccEEEEEecCCCCCc
Q 022313 6 ASKDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRF 85 (299)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~ 85 (299)
+..+++++.+..+++.++++++|.|++.++||+|||+++++|++|++.+.|.+. ..+|.++|||++|+|+++|++++.+
T Consensus 4 ~~~~~~a~~~~~~~~~~~l~~~p~p~~~~~~vlvkv~~~gi~~~D~~~~~g~~~-~~~p~v~G~e~~G~V~~vG~~v~~~ 82 (373)
T cd08299 4 KVIKCKAAVLWEPKKPFSIEEIEVAPPKAHEVRIKIVATGICRSDDHVVSGKLV-TPFPVILGHEAAGIVESVGEGVTTV 82 (373)
T ss_pred ccceeEEEEEecCCCCcEEEEeecCCCCCCEEEEEEEEEEcCcccHHHhcCCCC-CCCCccccccceEEEEEeCCCCccC
Confidence 445567777777778899999999999999999999999999999999888653 3568899999999999999999999
Q ss_pred ccCCEEEEeccccCCCCCccccCCCCcccccccccc-ccccC--------CC-----CccCCcceeeEEeecceEEEcCC
Q 022313 86 KVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTF-NAIDA--------DG-----TITKGGYSSYIVVHERYCYKIAN 151 (299)
Q Consensus 86 ~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~-~~~~~--------~g-----~~~~g~~~~~~~~~~~~~~~~p~ 151 (299)
++||+|.+.+ ..+|++|.+|+.++++.|......- .++.. +| ....|+|+||+.++++.++++|+
T Consensus 83 ~~Gd~V~~~~-~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~e~~~v~~~~~~~lP~ 161 (373)
T cd08299 83 KPGDKVIPLF-VPQCGKCRACLNPESNLCLKNDLGKPQGLMQDGTSRFTCKGKPIHHFLGTSTFSEYTVVDEIAVAKIDA 161 (373)
T ss_pred CCCCEEEECC-CCCCCCChhhhCCCcccCcCcccccccccccCCccccccCCcccccccCCCcccceEEecccceeeCCC
Confidence 9999998765 4599999999999999998753210 11110 01 01358999999999999999999
Q ss_pred CCCcccccccchhhHHHHHHhhhccCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCchHHHHHHHhcCCCEEE
Q 022313 152 DYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKFV 230 (299)
Q Consensus 152 ~~~~~~aa~~~~~~~ta~~al~~~~~~~~g~~vlI~G~g~~G~~a~~~a~~~g~-~v~~~~~~~~~~~~~~~~~g~~~v~ 230 (299)
++++++++.+.+++.++|+++.....++++++|+|+|+|++|++++++|+..|+ +|+++++++++++.+ +++|+++++
T Consensus 162 ~l~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~a-~~lGa~~~i 240 (373)
T cd08299 162 AAPLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSAIMGCKAAGASRIIAVDINKDKFAKA-KELGATECI 240 (373)
T ss_pred CCChHHhheeccchHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHcCCceEe
Confidence 999999999999999999987666677999999999989999999999999999 899999999999888 689999998
Q ss_pred eCCCH-----HHHHHh-cCCccEEEEcCCCchhHHHHHHhc-ccCcEEEEEcCC-C--ceeeChhhhhcCCeeeeee
Q 022313 231 VSSDL-----EQMKAL-GKSLDFIIDTASGDHPFDAYMSLL-KVAGVYVLVGFP-S--KVKFSPASLNIGNAPLFRF 297 (299)
Q Consensus 231 ~~~~~-----~~~~~~-~~~~d~v~d~~g~~~~~~~~~~~l-~~~G~~v~~g~~-~--~~~~~~~~l~~~~~~~~g~ 297 (299)
+..+. +.+.++ .+++|+++|++|+...+..++..+ +++|+++.+|.. . ..++++.. +.+++++.|+
T Consensus 241 ~~~~~~~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~~~ 316 (373)
T cd08299 241 NPQDYKKPIQEVLTEMTDGGVDFSFEVIGRLDTMKAALASCHEGYGVSVIVGVPPSSQNLSINPML-LLTGRTWKGA 316 (373)
T ss_pred cccccchhHHHHHHHHhCCCCeEEEECCCCcHHHHHHHHhhccCCCEEEEEccCCCCceeecCHHH-HhcCCeEEEE
Confidence 76542 122222 357999999999866677766655 679999999987 3 34454442 3467787775
No 32
>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase. (2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.
Probab=100.00 E-value=1e-37 Score=282.34 Aligned_cols=277 Identities=25% Similarity=0.367 Sum_probs=230.6
Q ss_pred eEEeeeCCCCcccceeeecCCCCCCcEEEEEceeecccchhhhhccCC-C----------CCCCCccccccccEEEEEec
Q 022313 11 LGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKH-G----------DSKYPLVPGHEIVGIVKEVG 79 (299)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~D~~~~~g~~-~----------~~~~p~~lG~e~~G~V~~vG 79 (299)
+++.+. .++.+++++++.|++.++||+||+.++++|++|++.+.+.. . ....|.++|||++|+|+++|
T Consensus 2 ka~~~~-~~~~l~~~~~~~p~~~~~evlV~v~a~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG 80 (351)
T cd08233 2 KAARYH-GRKDIRVEEVPEPPVKPGEVKIKVAWCGICGSDLHEYLDGPIFIPTEGHPHLTGETAPVTLGHEFSGVVVEVG 80 (351)
T ss_pred ceEEEe-cCCceEEEeccCCCCCCCeEEEEEEEEEECccchHhhcCCCccccccccccccccCCCceecccceEEEEEeC
Confidence 345553 45679999999999999999999999999999987664321 1 11368899999999999999
Q ss_pred CCCCCcccCCEEEEeccccCCCCCccccCCCCccccccccccccccCCCCccCCcceeeEEeecceEEEcCCCCCccccc
Q 022313 80 HNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAA 159 (299)
Q Consensus 80 ~~v~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa 159 (299)
+++++|++||+|...+. .+|++|.+|+++.+..|....+. +.. ...|+|++|+.++.+.++++|+++++++++
T Consensus 81 ~~v~~~~~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~~~----~~~g~~a~~~~~~~~~~~~lP~~~~~~~aa 153 (351)
T cd08233 81 SGVTGFKVGDRVVVEPT-IKCGTCGACKRGLYNLCDSLGFI--GLG----GGGGGFAEYVVVPAYHVHKLPDNVPLEEAA 153 (351)
T ss_pred CCCCCCCCCCEEEECCC-CCCCCChHHhCcCcccCCCCcee--ccC----CCCCceeeEEEechHHeEECcCCCCHHHhh
Confidence 99999999999987654 48999999999999999865421 110 125899999999999999999999999887
Q ss_pred ccchhhHHHHHHhhhccCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCchHHHHHHHhcCCCEEEeCCCHHH-
Q 022313 160 PLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKFVVSSDLEQ- 237 (299)
Q Consensus 160 ~~~~~~~ta~~al~~~~~~~~g~~vlI~G~g~~G~~a~~~a~~~g~-~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~- 237 (299)
.+ .++.++|+++. ...++++++|+|+|+|++|++++|+|+..|+ +|+++++++++.+.+ +++|++.++++++.+.
T Consensus 154 ~~-~~~~ta~~~l~-~~~~~~g~~vlI~g~g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~-~~~ga~~~i~~~~~~~~ 230 (351)
T cd08233 154 LV-EPLAVAWHAVR-RSGFKPGDTALVLGAGPIGLLTILALKAAGASKIIVSEPSEARRELA-EELGATIVLDPTEVDVV 230 (351)
T ss_pred hc-cHHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHhCCCEEECCCccCHH
Confidence 66 57789999984 4456999999999999999999999999999 899998888888877 6799999998776433
Q ss_pred --HHHhc--CCccEEEEcCCCchhHHHHHHhcccCcEEEEEcCC-CceeeChhhhhcCCeeeeeec
Q 022313 238 --MKALG--KSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP-SKVKFSPASLNIGNAPLFRFK 298 (299)
Q Consensus 238 --~~~~~--~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~-~~~~~~~~~l~~~~~~~~g~~ 298 (299)
+.+.. +++|+++|++|+...++.++++++++|+++.+|.. ...++++..++.|++++.|+.
T Consensus 231 ~~l~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~ 296 (351)
T cd08233 231 AEVRKLTGGGGVDVSFDCAGVQATLDTAIDALRPRGTAVNVAIWEKPISFNPNDLVLKEKTLTGSI 296 (351)
T ss_pred HHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCCCEEEEEccCCCCCccCHHHHHhhCcEEEEEe
Confidence 33332 46999999999766689999999999999999988 667788888999999999863
No 33
>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu
Probab=100.00 E-value=8.1e-37 Score=277.92 Aligned_cols=286 Identities=27% Similarity=0.447 Sum_probs=237.5
Q ss_pred ccceEEeeeCCCCcccceeeecCCCCCCcEEEEEceeecccchhhhhccCCCCCCCCccccccccEEEEEecCCCCCccc
Q 022313 8 KDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKV 87 (299)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~ 87 (299)
|+|+++.+.+.++.+++.+.+.|++.++||+|||.++++|++|++.+.|.++ ...|.++|||++|+|+++|+++.++++
T Consensus 1 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~~v~Vkv~a~gi~~~d~~~~~g~~~-~~~p~v~G~e~~G~V~~vG~~v~~~~~ 79 (365)
T cd08278 1 MKTTAAVVREPGGPFVLEDVELDDPRPDEVLVRIVATGICHTDLVVRDGGLP-TPLPAVLGHEGAGVVEAVGSAVTGLKP 79 (365)
T ss_pred CccEEeeeccCCCcceEEEeecCCCCCCeEEEEEEEeecCcccHHHhcCCCC-CCCCcccccceeEEEEEeCCCcccCCC
Confidence 4667777765556788999999999999999999999999999999888664 346789999999999999999999999
Q ss_pred CCEEEEeccccCCCCCccccCCCCccccccccc-cccccCCC---------------CccCCcceeeEEeecceEEEcCC
Q 022313 88 GDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYT-FNAIDADG---------------TITKGGYSSYIVVHERYCYKIAN 151 (299)
Q Consensus 88 Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~-~~~~~~~g---------------~~~~g~~~~~~~~~~~~~~~~p~ 151 (299)
||+|.+.+ .+|+.|.+|+.+..++|...... +.+...+| ....|+|++|+.++++.++++|+
T Consensus 80 Gd~V~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~iP~ 157 (365)
T cd08278 80 GDHVVLSF--ASCGECANCLSGHPAYCENFFPLNFSGRRPDGSTPLSLDDGTPVHGHFFGQSSFATYAVVHERNVVKVDK 157 (365)
T ss_pred CCEEEEcc--cCCCCChHHhCCCcccccCcccccccccccCCcccccccCCcccccccccccceeeEEEecchhEEECCC
Confidence 99998754 38999999999999999864321 11111111 12358999999999999999999
Q ss_pred CCCcccccccchhhHHHHHHhhhccCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCchHHHHHHHhcCCCEEE
Q 022313 152 DYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKFV 230 (299)
Q Consensus 152 ~~~~~~aa~~~~~~~ta~~al~~~~~~~~g~~vlI~G~g~~G~~a~~~a~~~g~-~v~~~~~~~~~~~~~~~~~g~~~v~ 230 (299)
++++++++.+++++.|++.++.....++++++|+|+|+|++|++++|+|+..|+ .++++++++++.+.+ +++|+++++
T Consensus 158 ~~s~~~a~~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~vG~~~~~la~~~G~~~v~~~~~~~~k~~~~-~~~g~~~~i 236 (365)
T cd08278 158 DVPLELLAPLGCGIQTGAGAVLNVLKPRPGSSIAVFGAGAVGLAAVMAAKIAGCTTIIAVDIVDSRLELA-KELGATHVI 236 (365)
T ss_pred CCCHHHhhhhcchhhhhhHHHhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH-HHcCCcEEe
Confidence 999999999999999999988776677999999999889999999999999999 588888888777766 789999998
Q ss_pred eCCCHH---HHHHh-cCCccEEEEcCCCchhHHHHHHhcccCcEEEEEcCC---CceeeChhhhhcCCeeeeee
Q 022313 231 VSSDLE---QMKAL-GKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP---SKVKFSPASLNIGNAPLFRF 297 (299)
Q Consensus 231 ~~~~~~---~~~~~-~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~---~~~~~~~~~l~~~~~~~~g~ 297 (299)
+..+.. .+.+. .+++|+++|++|+...+..++++++++|+++.+|.. ....+++..++.+++++.++
T Consensus 237 ~~~~~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (365)
T cd08278 237 NPKEEDLVAAIREITGGGVDYALDTTGVPAVIEQAVDALAPRGTLALVGAPPPGAEVTLDVNDLLVSGKTIRGV 310 (365)
T ss_pred cCCCcCHHHHHHHHhCCCCcEEEECCCCcHHHHHHHHHhccCCEEEEeCcCCCCCccccCHHHHhhcCceEEEe
Confidence 876532 23222 468999999999866689999999999999999975 34567777776888888775
No 34
>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall
Probab=100.00 E-value=3.2e-36 Score=274.00 Aligned_cols=282 Identities=24% Similarity=0.361 Sum_probs=233.8
Q ss_pred EEeeeCCCCcccceeeecCCCCCCcEEEEEceeecccchhhhhccCCCCCCCCccccccccEEEEEecCCCCCcccCCEE
Q 022313 12 GWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHV 91 (299)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~V 91 (299)
++.+...++++++++++.|++.++||+|++.++++|++|++.+.+.+. ...|.++|||++|+|+++|+++..+++||+|
T Consensus 3 a~~~~~~~~~~~~~~~~~p~~~~~~vlv~v~~~~i~~~d~~~~~g~~~-~~~~~i~g~e~~G~V~~vG~~v~~~~~Gd~V 81 (365)
T cd05279 3 AAVLWEKGKPLSIEEIEVAPPKAGEVRIKVVATGVCHTDLHVIDGKLP-TPLPVILGHEGAGIVESIGPGVTTLKPGDKV 81 (365)
T ss_pred eeEEecCCCCcEEEEeecCCCCCCeEEEEEEEeeecchhHHHhcCCCC-CCCCcccccceeEEEEEeCCCcccCCCCCEE
Confidence 455555667899999999999999999999999999999998887654 3457799999999999999999999999999
Q ss_pred EEeccccCCCCCccccCCCCccccccccc-cccccCCC-------------CccCCcceeeEEeecceEEEcCCCCCccc
Q 022313 92 GVGTYVNSCRDCEYCNDGLEVHCARSVYT-FNAIDADG-------------TITKGGYSSYIVVHERYCYKIANDYPLAL 157 (299)
Q Consensus 92 ~~~~~~~~c~~c~~~~~~~~~~~~~~~~~-~~~~~~~g-------------~~~~g~~~~~~~~~~~~~~~~p~~~~~~~ 157 (299)
.+.+. .+|++|.+|..+++++|....+. ..|...+| ....|+|++|+.++++.++++|+++++++
T Consensus 82 v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~~~~~~ 160 (365)
T cd05279 82 IPLFG-PQCGKCKQCLNPRPNLCSKSRGTNGRGLMSDGTSRFTCKGKPIHHFLGTSTFAEYTVVSEISLAKIDPDAPLEK 160 (365)
T ss_pred EEcCC-CCCCCChhhcCCCcccCCCcccccccccccCCcceeeccCCccccccccccccceEEecCCceEECCCCCCHHH
Confidence 87654 48999999999999999876543 11111111 11247999999999999999999999999
Q ss_pred ccccchhhHHHHHHhhhccCCCCCCEEEEEcCChHHHHHHHHHHHCCCe-EEEEeCCchHHHHHHHhcCCCEEEeCCCH-
Q 022313 158 AAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLN-VTVLSTSTSKKEEALSLLGADKFVVSSDL- 235 (299)
Q Consensus 158 aa~~~~~~~ta~~al~~~~~~~~g~~vlI~G~g~~G~~a~~~a~~~g~~-v~~~~~~~~~~~~~~~~~g~~~v~~~~~~- 235 (299)
++.+.+++.++|+++.....++++++|||+|+|++|++++++|+..|++ ++++++++++.+.+ +++|++++++..+.
T Consensus 161 a~~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~a~~~a~~~G~~~v~~~~~~~~~~~~~-~~~g~~~~v~~~~~~ 239 (365)
T cd05279 161 VCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSVIMGCKAAGASRIIAVDINKDKFEKA-KQLGATECINPRDQD 239 (365)
T ss_pred hhHhccchhHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH-HHhCCCeeccccccc
Confidence 9999999999999987777779999999998899999999999999995 67777788888877 78999998876654
Q ss_pred -HH---HHHh-cCCccEEEEcCCCchhHHHHHHhcc-cCcEEEEEcCC---CceeeChhhhhcCCeeeeee
Q 022313 236 -EQ---MKAL-GKSLDFIIDTASGDHPFDAYMSLLK-VAGVYVLVGFP---SKVKFSPASLNIGNAPLFRF 297 (299)
Q Consensus 236 -~~---~~~~-~~~~d~v~d~~g~~~~~~~~~~~l~-~~G~~v~~g~~---~~~~~~~~~l~~~~~~~~g~ 297 (299)
+. +.+. .+++|+++|++|....+..++++++ ++|+++.+|.. ....++...+ .++.++.|+
T Consensus 240 ~~~~~~l~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~l~g~ 309 (365)
T cd05279 240 KPIVEVLTEMTDGGVDYAFEVIGSADTLKQALDATRLGGGTSVVVGVPPSGTEATLDPNDL-LTGRTIKGT 309 (365)
T ss_pred chHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhccCCCEEEEEecCCCCCceeeCHHHH-hcCCeEEEE
Confidence 22 2222 4689999999987666899999999 99999999875 4567777777 677787764
No 35
>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]
Probab=100.00 E-value=6.4e-37 Score=255.62 Aligned_cols=259 Identities=24% Similarity=0.269 Sum_probs=224.8
Q ss_pred ccccccceEEeeeCCC-CcccceeeecCCCCCCcEEEEEceeecccchhhhhccCCC-CCCCCccccccccEEEEEecCC
Q 022313 4 ETASKDCLGWAARDPS-GVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG-DSKYPLVPGHEIVGIVKEVGHN 81 (299)
Q Consensus 4 ~~~~~~~~~~~~~~~~-~~~~~~~~~~p~~~~~evlv~v~~~~i~~~D~~~~~g~~~-~~~~p~~lG~e~~G~V~~vG~~ 81 (299)
|+.+.++..+.-++.| +.+++++++.|+.+.++|+||..|+.||++|+..++|.++ .+++|.+-|.|++|+|+.+|+.
T Consensus 16 ~~~~~kalvY~~hgdP~kVlql~~~~~p~~~~s~v~Vk~LAaPINPsDIN~IQGvYpvrP~~PAVgGnEGv~eVv~vGs~ 95 (354)
T KOG0025|consen 16 MPARSKALVYSEHGDPAKVLQLKNLELPAVPGSDVLVKMLAAPINPSDINQIQGVYPVRPELPAVGGNEGVGEVVAVGSN 95 (354)
T ss_pred cccccceeeecccCCchhhheeecccCCCCCCCceeeeeeecCCChHHhhhhccccCCCCCCCcccCCcceEEEEEecCC
Confidence 4555566666665554 4578899999999888899999999999999999999998 5678999999999999999999
Q ss_pred CCCcccCCEEEEeccccCCCCCccccCCCCccccccccccccccCCCCccCCcceeeEEeecceEEEcCCCCCccccccc
Q 022313 82 VSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPL 161 (299)
Q Consensus 82 v~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~ 161 (299)
++.|++||+|.... ...|+|++|.+.+++.+++++++++++.||++
T Consensus 96 vkgfk~Gd~VIp~~----------------------------------a~lGtW~t~~v~~e~~Li~vd~~~pl~~AAT~ 141 (354)
T KOG0025|consen 96 VKGFKPGDWVIPLS----------------------------------ANLGTWRTEAVFSESDLIKVDKDIPLASAATL 141 (354)
T ss_pred cCccCCCCeEeecC----------------------------------CCCccceeeEeecccceEEcCCcCChhhhhee
Confidence 99999999997422 35799999999999999999999999999999
Q ss_pred chhhHHHHHHhhhccCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHH---HhcCCCEEEeCCCH--
Q 022313 162 LCAGITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEAL---SLLGADKFVVSSDL-- 235 (299)
Q Consensus 162 ~~~~~ta~~al~~~~~~~~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~---~~~g~~~v~~~~~~-- 235 (299)
..+.+|||.+|...-.+++|++|+-.|+ +++|++.+|+|++.|.+-+-++|+....++++ +.+|+++|+...+.
T Consensus 142 ~VNP~TAyrmL~dfv~L~~GD~vIQNganS~VG~~ViQlaka~GiktinvVRdR~~ieel~~~Lk~lGA~~ViTeeel~~ 221 (354)
T KOG0025|consen 142 SVNPCTAYRMLKDFVQLNKGDSVIQNGANSGVGQAVIQLAKALGIKTINVVRDRPNIEELKKQLKSLGATEVITEEELRD 221 (354)
T ss_pred ccCchHHHHHHHHHHhcCCCCeeeecCcccHHHHHHHHHHHHhCcceEEEeecCccHHHHHHHHHHcCCceEecHHHhcc
Confidence 9999999999999888899999988898 99999999999999999888888876665543 56799999854432
Q ss_pred -HHHHH--hcCCccEEEEcCCCchhHHHHHHhcccCcEEEEEcCC--CceeeChhhhhcCCeeeeee
Q 022313 236 -EQMKA--LGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP--SKVKFSPASLNIGNAPLFRF 297 (299)
Q Consensus 236 -~~~~~--~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~--~~~~~~~~~l~~~~~~~~g~ 297 (299)
+.... ...++.+.|||+|+.. .....+.|.++|+++++|.+ .++.++...+++|.|+++||
T Consensus 222 ~~~~k~~~~~~~prLalNcVGGks-a~~iar~L~~GgtmvTYGGMSkqPv~~~ts~lIFKdl~~rGf 287 (354)
T KOG0025|consen 222 RKMKKFKGDNPRPRLALNCVGGKS-ATEIARYLERGGTMVTYGGMSKQPVTVPTSLLIFKDLKLRGF 287 (354)
T ss_pred hhhhhhhccCCCceEEEeccCchh-HHHHHHHHhcCceEEEecCccCCCcccccchheeccceeeee
Confidence 12211 1367899999999987 88899999999999999888 89999999999999999998
No 36
>PRK10083 putative oxidoreductase; Provisional
Probab=100.00 E-value=3.6e-36 Score=270.84 Aligned_cols=274 Identities=22% Similarity=0.312 Sum_probs=222.2
Q ss_pred eEEeeeCCCCcccceeeecCCCCCCcEEEEEceeecccchhhhhccCCCCCCCCccccccccEEEEEecCCCCCcccCCE
Q 022313 11 LGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDH 90 (299)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~ 90 (299)
+++.+. .++.+++.+++.|++.++|++||+.++++|++|++.+.|..+..++|.++|||++|+|+++|+++..+++||+
T Consensus 2 ~a~~~~-~~~~~~~~~~~~p~~~~~~vlV~v~~~gi~~~d~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~ 80 (339)
T PRK10083 2 KSIVIE-KPNSLAIEERPIPQPAAGEVRVKVKLAGICGSDSHIYRGHNPFAKYPRVIGHEFFGVIDAVGEGVDAARIGER 80 (339)
T ss_pred eEEEEe-cCCeeEEEeccCCCCCCCeEEEEEEEEEEcccchHHHcCCCCcCCCCcccccceEEEEEEECCCCccCCCCCE
Confidence 344443 4667999999999999999999999999999999988876654456889999999999999999999999999
Q ss_pred EEEeccccCCCCCccccCCCCccccccccccccccCCCCccCCcceeeEEeecceEEEcCCCCCcccccccchhhHHHHH
Q 022313 91 VGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYT 170 (299)
Q Consensus 91 V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~ 170 (299)
|.+.+.. +|+.|.+|..+++++|.+..+. +....|+|++|+.++.+.++++|++++++.++ +..++.++|+
T Consensus 81 V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~a~-~~~~~~~a~~ 151 (339)
T PRK10083 81 VAVDPVI-SCGHCYPCSIGKPNVCTSLVVL-------GVHRDGGFSEYAVVPAKNAHRIPDAIADQYAV-MVEPFTIAAN 151 (339)
T ss_pred EEEcccc-CCCCCccccCcCcccCCCCceE-------EEccCCcceeeEEechHHeEECcCCCCHHHHh-hhchHHHHHH
Confidence 9887665 7999999999999999865431 11235899999999999999999999998876 5567788886
Q ss_pred HhhhccCCCCCCEEEEEcCChHHHHHHHHHHH-CCCe-EEEEeCCchHHHHHHHhcCCCEEEeCCCHHHHHHh---cCCc
Q 022313 171 PMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKA-FGLN-VTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKAL---GKSL 245 (299)
Q Consensus 171 al~~~~~~~~g~~vlI~G~g~~G~~a~~~a~~-~g~~-v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~---~~~~ 245 (299)
+.. ...++++++|+|+|+|++|++++|+|+. +|++ ++++++++++.+.+ +++|++++++.++....+.+ ..++
T Consensus 152 ~~~-~~~~~~g~~vlI~g~g~vG~~~~~~a~~~~G~~~v~~~~~~~~~~~~~-~~~Ga~~~i~~~~~~~~~~~~~~g~~~ 229 (339)
T PRK10083 152 VTG-RTGPTEQDVALIYGAGPVGLTIVQVLKGVYNVKAVIVADRIDERLALA-KESGADWVINNAQEPLGEALEEKGIKP 229 (339)
T ss_pred HHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHH-HHhCCcEEecCccccHHHHHhcCCCCC
Confidence 554 4456999999999999999999999996 5995 66677777777776 68999999987653332322 2346
Q ss_pred cEEEEcCCCchhHHHHHHhcccCcEEEEEcCC-CceeeChhhhhcCCeeeee
Q 022313 246 DFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP-SKVKFSPASLNIGNAPLFR 296 (299)
Q Consensus 246 d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~-~~~~~~~~~l~~~~~~~~g 296 (299)
|++||++|+...+..++++++++|+++.+|.. ....++...+..+++++.+
T Consensus 230 d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~ 281 (339)
T PRK10083 230 TLIIDAACHPSILEEAVTLASPAARIVLMGFSSEPSEIVQQGITGKELSIFS 281 (339)
T ss_pred CEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCceecHHHHhhcceEEEE
Confidence 79999999766699999999999999999987 4444555555567777665
No 37
>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase.
Probab=100.00 E-value=1.3e-36 Score=270.30 Aligned_cols=247 Identities=21% Similarity=0.198 Sum_probs=195.8
Q ss_pred ceEEeeeCCCCcccceeeecCCCCCCcEEEEEceeecc-cchhhhhccCCCC---CCCCccccccccEEEEEecCCCCCc
Q 022313 10 CLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVC-YADVIWTRNKHGD---SKYPLVPGHEIVGIVKEVGHNVSRF 85 (299)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~~i~-~~D~~~~~g~~~~---~~~p~~lG~e~~G~V~~vG~~v~~~ 85 (299)
++++.+. .++.+++.+.+.|++.++||+|||+++++| ++|++.+.|.++. ..+|.++|||++|+|+++|+++ +|
T Consensus 2 ~ka~~~~-~~~~l~~~e~~~p~~~~~evlVkv~~~gi~~~~D~~~~~G~~~~~~~~~~P~i~GhE~~G~V~~vG~~v-~~ 79 (308)
T TIGR01202 2 TQAIVLS-GPNQIELREVTLTPPSPGDLVVEIWYSGISTGTEKLFWNGLMPPFPGMGYPLVPGYESVGRVVEAGPDT-GF 79 (308)
T ss_pred ceEEEEe-CCCeEEEEEecCCCCCCCeEEEEEEEEeeccCchhHHhcCCCCCCCCCCCCccCcceeEEEEEEecCCC-CC
Confidence 4455553 567899999999999999999999999996 7999888886542 3569999999999999999998 69
Q ss_pred ccCCEEEEeccccCCCCCccccCCCCccccccccccccccCCCCccCCcceeeEEeecceEEEcCCCCCcccccccchhh
Q 022313 86 KVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAG 165 (299)
Q Consensus 86 ~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~ 165 (299)
++||+|++. |..|..|.. ...|+|+||+.+|++.++++|++++++. +.+ ..+
T Consensus 80 ~vGdrV~~~-----~~~c~~~~~---------------------~~~G~~aey~~v~~~~~~~ip~~~~~~~-a~~-~~~ 131 (308)
T TIGR01202 80 RPGDRVFVP-----GSNCYEDVR---------------------GLFGGASKRLVTPASRVCRLDPALGPQG-ALL-ALA 131 (308)
T ss_pred CCCCEEEEe-----Ccccccccc---------------------ccCCcccceEEcCHHHceeCCCCCCHHH-Hhh-hHH
Confidence 999999752 333332211 1248999999999999999999998864 444 457
Q ss_pred HHHHHHhhhccCCCCCCEEEEEcCChHHHHHHHHHHHCCCe-EEEEeCCchHHHHHHHhcCCCEEEeCCCHHHHHHhcCC
Q 022313 166 ITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLN-VTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKS 244 (299)
Q Consensus 166 ~ta~~al~~~~~~~~g~~vlI~G~g~~G~~a~~~a~~~g~~-v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~ 244 (299)
.++|+++... . .++++++|+|+|++|++++|+|+..|++ |++++.++++++.+ .+ ..++++.+. ...+
T Consensus 132 ~~a~~~~~~~-~-~~~~~vlV~G~G~vG~~a~q~ak~~G~~~v~~~~~~~~rl~~a-~~---~~~i~~~~~-----~~~g 200 (308)
T TIGR01202 132 ATARHAVAGA-E-VKVLPDLIVGHGTLGRLLARLTKAAGGSPPAVWETNPRRRDGA-TG---YEVLDPEKD-----PRRD 200 (308)
T ss_pred HHHHHHHHhc-c-cCCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHhh-hh---ccccChhhc-----cCCC
Confidence 8999998764 3 4688999999999999999999999996 55556665565544 22 344444321 3468
Q ss_pred ccEEEEcCCCchhHHHHHHhcccCcEEEEEcCC-CceeeChhhhhcCCeeeeee
Q 022313 245 LDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP-SKVKFSPASLNIGNAPLFRF 297 (299)
Q Consensus 245 ~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~-~~~~~~~~~l~~~~~~~~g~ 297 (299)
+|++||++|+...++.++++++++|+++.+|.. ...++++..++.|+++++|.
T Consensus 201 ~Dvvid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~~~ 254 (308)
T TIGR01202 201 YRAIYDASGDPSLIDTLVRRLAKGGEIVLAGFYTEPVNFDFVPAFMKEARLRIA 254 (308)
T ss_pred CCEEEECCCCHHHHHHHHHhhhcCcEEEEEeecCCCcccccchhhhcceEEEEe
Confidence 999999999977689999999999999999987 56678888888999999875
No 38
>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase. This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.
Probab=100.00 E-value=3.3e-36 Score=264.32 Aligned_cols=228 Identities=26% Similarity=0.348 Sum_probs=193.2
Q ss_pred cccccccEEEEEecCCCC------CcccCCEEEEeccccCCCCCccccCCCCccccccccccccccC--CCCccCCccee
Q 022313 66 VPGHEIVGIVKEVGHNVS------RFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDA--DGTITKGGYSS 137 (299)
Q Consensus 66 ~lG~e~~G~V~~vG~~v~------~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~--~g~~~~g~~~~ 137 (299)
++|||++|+|+++|++++ ++++||||.+.+. .+|+.|.+|+.+.+++|.+..+. |... .+....|+|+|
T Consensus 1 v~GHE~~G~V~~vG~~v~~~~~~~~~~~GdrV~~~~~-~~cg~C~~C~~g~~~~C~~~~~~--g~~~~~~~~~~~G~~ae 77 (280)
T TIGR03366 1 VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVT-VPCGRCFRCRRGLPQKCDSLRKY--GHEALDSGWPLSGGYAE 77 (280)
T ss_pred CCCcccceEEEEeCCCccccccCCCCCCCCEEEEcCC-CCCCCChhhhCcCcccCCChhhc--CcccccCCcccccccee
Confidence 589999999999999998 8999999987665 48999999999999999875432 2211 12224699999
Q ss_pred eEEeecc-eEEEcCCCCCcccccccchhhHHHHHHhhhccCCCCCCEEEEEcCChHHHHHHHHHHHCCCe-EEEEeCCch
Q 022313 138 YIVVHER-YCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLN-VTVLSTSTS 215 (299)
Q Consensus 138 ~~~~~~~-~~~~~p~~~~~~~aa~~~~~~~ta~~al~~~~~~~~g~~vlI~G~g~~G~~a~~~a~~~g~~-v~~~~~~~~ 215 (299)
|+.+|++ .++++|+++++++++++.+.+.|+|++++.... .++++|||+|+|++|++++|+|+..|++ |++++++++
T Consensus 78 y~~v~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~al~~~~~-~~g~~VlV~G~G~vG~~~~~~ak~~G~~~Vi~~~~~~~ 156 (280)
T TIGR03366 78 HCHLPAGTAIVPVPDDLPDAVAAPAGCATATVMAALEAAGD-LKGRRVLVVGAGMLGLTAAAAAAAAGAARVVAADPSPD 156 (280)
T ss_pred eEEecCCCcEEECCCCCCHHHhhHhhhHHHHHHHHHHhccC-CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHH
Confidence 9999997 799999999999999999999999999987766 6999999999999999999999999996 888888888
Q ss_pred HHHHHHHhcCCCEEEeCCCH-HHHHHhc--CCccEEEEcCCCchhHHHHHHhcccCcEEEEEcCC---CceeeChhhhhc
Q 022313 216 KKEEALSLLGADKFVVSSDL-EQMKALG--KSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP---SKVKFSPASLNI 289 (299)
Q Consensus 216 ~~~~~~~~~g~~~v~~~~~~-~~~~~~~--~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~---~~~~~~~~~l~~ 289 (299)
+.+.+ +++|++.+++..+. +.+.++. .++|++||++|....++.++++++++|+++.+|.. ...++++..++.
T Consensus 157 r~~~a-~~~Ga~~~i~~~~~~~~~~~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~i~~~~~~~ 235 (280)
T TIGR03366 157 RRELA-LSFGATALAEPEVLAERQGGLQNGRGVDVALEFSGATAAVRACLESLDVGGTAVLAGSVFPGGPVALDPEQVVR 235 (280)
T ss_pred HHHHH-HHcCCcEecCchhhHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEeccCCCCCceeeCHHHHHh
Confidence 87777 78999998876543 2233332 57999999999887789999999999999999975 346788899999
Q ss_pred CCeeeeeec
Q 022313 290 GNAPLFRFK 298 (299)
Q Consensus 290 ~~~~~~g~~ 298 (299)
|++++.|+.
T Consensus 236 ~~~~i~g~~ 244 (280)
T TIGR03366 236 RWLTIRGVH 244 (280)
T ss_pred CCcEEEecC
Confidence 999999864
No 39
>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases. This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=1.1e-35 Score=269.02 Aligned_cols=278 Identities=20% Similarity=0.252 Sum_probs=223.8
Q ss_pred eEEeeeCCCCcccceeeecCCCCCCcEEEEEceeecccchhhhhccCCCCCCCCccccccccEEEEEecCCCCCcccCCE
Q 022313 11 LGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDH 90 (299)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~ 90 (299)
+++.+. +++.+++.+.+.|.+.++||+|||+++++|++|++.+.+.+.....|.++|||++|+|+++|+++.++++||+
T Consensus 2 ka~~~~-~~~~~~l~~~~~p~~~~~evlIkv~a~~i~~~d~~~~~g~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~ 80 (351)
T cd08285 2 KAFAML-GIGKVGWIEKPIPVCGPNDAIVRPTAVAPCTSDVHTVWGGAPGERHGMILGHEAVGVVEEVGSEVKDFKPGDR 80 (351)
T ss_pred ceEEEc-cCCccEEEECCCCCCCCCeEEEEEEEEEechhhHHHhcCCCCCCCCCcccCcceEEEEEEecCCcCccCCCCE
Confidence 345553 4456888899999999999999999999999999888776544456889999999999999999999999999
Q ss_pred EEEeccccCCCCCccccCCCCccccccccccccccCCCCccCCcceeeEEeecc--eEEEcCCCCCcccccccchhhHHH
Q 022313 91 VGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHER--YCYKIANDYPLALAAPLLCAGITV 168 (299)
Q Consensus 91 V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~--~~~~~p~~~~~~~aa~~~~~~~ta 168 (299)
|...+. .+|+.|..|..+++..|.+.. .++.. +....|+|++|+.++.+ .++++|+++++++++.++..+.|+
T Consensus 81 V~~~~~-~~~~~c~~c~~g~~~~~~~~~---~~~~~-~~~~~g~~~~y~~v~~~~~~~~~lP~~~~~~~aa~~~~~~~ta 155 (351)
T cd08285 81 VIVPAI-TPDWRSVAAQRGYPSQSGGML---GGWKF-SNFKDGVFAEYFHVNDADANLAPLPDGLTDEQAVMLPDMMSTG 155 (351)
T ss_pred EEEcCc-CCCCCCHHHHCcCcccCcCCC---CCccc-cCCCCcceeEEEEcchhhCceEECCCCCCHHHhhhhccchhhH
Confidence 987665 489999999999999998742 11111 22346999999999974 899999999999999999999999
Q ss_pred HHHhhhccCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCchHHHHHHHhcCCCEEEeCCCHHH---HHHhc--
Q 022313 169 YTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKFVVSSDLEQ---MKALG-- 242 (299)
Q Consensus 169 ~~al~~~~~~~~g~~vlI~G~g~~G~~a~~~a~~~g~-~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~---~~~~~-- 242 (299)
|+++... .++++++|||+|+|++|++++|+|+..|+ .++++++++++.+.+ +++|++++++..+.+. +..+.
T Consensus 156 ~~~~~~~-~~~~g~~vlI~g~g~iG~~~~~lak~~G~~~v~~~~~~~~~~~~~-~~~g~~~~v~~~~~~~~~~i~~~~~~ 233 (351)
T cd08285 156 FHGAELA-NIKLGDTVAVFGIGPVGLMAVAGARLRGAGRIIAVGSRPNRVELA-KEYGATDIVDYKNGDVVEQILKLTGG 233 (351)
T ss_pred HHHHHcc-CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH-HHcCCceEecCCCCCHHHHHHHHhCC
Confidence 9997544 55999999999889999999999999999 588888887777666 6899999988765332 33332
Q ss_pred CCccEEEEcCCCchhHHHHHHhcccCcEEEEEcCC-Cc--eeeCh--hhhhcCCeeeee
Q 022313 243 KSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP-SK--VKFSP--ASLNIGNAPLFR 296 (299)
Q Consensus 243 ~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~-~~--~~~~~--~~l~~~~~~~~g 296 (299)
+++|+++|++|+...+..++++++++|+++.+|.. .. .+++. ..+..+.+++.+
T Consensus 234 ~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~i~~ 292 (351)
T cd08285 234 KGVDAVIIAGGGQDTFEQALKVLKPGGTISNVNYYGEDDYLPIPREEWGVGMGHKTING 292 (351)
T ss_pred CCCcEEEECCCCHHHHHHHHHHhhcCCEEEEecccCCCceeecChhhhhhhccccEEEE
Confidence 57999999999876689999999999999999987 32 33432 222345555554
No 40
>cd05284 arabinose_DH_like D-arabinose dehydrogenase. This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d
Probab=100.00 E-value=1.6e-35 Score=266.62 Aligned_cols=278 Identities=30% Similarity=0.458 Sum_probs=234.5
Q ss_pred eEEeeeCCCCcccceeeecCCCCCCcEEEEEceeecccchhhhhccCCC---CCCCCccccccccEEEEEecCCCCCccc
Q 022313 11 LGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG---DSKYPLVPGHEIVGIVKEVGHNVSRFKV 87 (299)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~D~~~~~g~~~---~~~~p~~lG~e~~G~V~~vG~~v~~~~~ 87 (299)
+++.+..+.+.+++.+.+.|++.++||+||+.++++|++|+..+.|.+. ....|.++|+|++|+|+++|+++.+|++
T Consensus 2 ka~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~ 81 (340)
T cd05284 2 KAARLYEYGKPLRLEDVPVPEPGPGQVLVRVGGAGVCHSDLHVIDGVWGGILPYKLPFTLGHENAGWVEEVGSGVDGLKE 81 (340)
T ss_pred eeeEeccCCCCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCcccccCCCCeecccceeEEEEEeCCCCCcCcC
Confidence 3555544446788889999999999999999999999999988877654 2345788999999999999999999999
Q ss_pred CCEEEEeccccCCCCCccccCCCCccccccccccccccCCCCccCCcceeeEEeecceEEEcCCCCCcccccccchhhHH
Q 022313 88 GDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGIT 167 (299)
Q Consensus 88 Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~t 167 (299)
||+|...+.. .|+.|..|+.+...+|.+..+. |....|+|++|+.++++.++++|+++++++++.+++.+.|
T Consensus 82 Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~v~~~~~~~~P~~ls~~~aa~l~~~~~t 153 (340)
T cd05284 82 GDPVVVHPPW-GCGTCRYCRRGEENYCENARFP-------GIGTDGGFAEYLLVPSRRLVKLPRGLDPVEAAPLADAGLT 153 (340)
T ss_pred CCEEEEcCCC-CCCCChHHhCcCcccCCCCccc-------CccCCCcceeeEEecHHHeEECCCCCCHHHhhhhcchHHH
Confidence 9999876554 7999999999999999987653 2234699999999999999999999999999999999999
Q ss_pred HHHHhhhc-cCCCCCCEEEEEcCChHHHHHHHHHHHCC-CeEEEEeCCchHHHHHHHhcCCCEEEeCCCH--HHHHHhc-
Q 022313 168 VYTPMMRH-KMNQPGKSLGVIGLGGLGHMAVKFGKAFG-LNVTVLSTSTSKKEEALSLLGADKFVVSSDL--EQMKALG- 242 (299)
Q Consensus 168 a~~al~~~-~~~~~g~~vlI~G~g~~G~~a~~~a~~~g-~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~--~~~~~~~- 242 (299)
||+++... ..+.++++|||+|+|.+|++++++|+..| .+|+++++++++.+.+ +++|.+++++.++. +.+.++.
T Consensus 154 a~~~l~~~~~~~~~~~~vlI~g~~~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~i~~~~~ 232 (340)
T cd05284 154 AYHAVKKALPYLDPGSTVVVIGVGGLGHIAVQILRALTPATVIAVDRSEEALKLA-ERLGADHVLNASDDVVEEVRELTG 232 (340)
T ss_pred HHHHHHHhcccCCCCCEEEEEcCcHHHHHHHHHHHHhCCCcEEEEeCCHHHHHHH-HHhCCcEEEcCCccHHHHHHHHhC
Confidence 99999775 45688999999999889999999999999 7999999998888887 78999999887754 2233333
Q ss_pred -CCccEEEEcCCCchhHHHHHHhcccCcEEEEEcCCCceeeChhhhhcCCeeeeee
Q 022313 243 -KSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPSKVKFSPASLNIGNAPLFRF 297 (299)
Q Consensus 243 -~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~l~~~~~~~~g~ 297 (299)
.++|+++|++|+......++++++++|+++.+|.....+++...++.+++++.++
T Consensus 233 ~~~~dvvld~~g~~~~~~~~~~~l~~~g~~i~~g~~~~~~~~~~~~~~~~~~~~~~ 288 (340)
T cd05284 233 GRGADAVIDFVGSDETLALAAKLLAKGGRYVIVGYGGHGRLPTSDLVPTEISVIGS 288 (340)
T ss_pred CCCCCEEEEcCCCHHHHHHHHHHhhcCCEEEEEcCCCCCccCHHHhhhcceEEEEE
Confidence 4799999999986668999999999999999997733555666656788888875
No 41
>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional
Probab=100.00 E-value=3e-35 Score=264.74 Aligned_cols=276 Identities=26% Similarity=0.456 Sum_probs=230.9
Q ss_pred eEEeeeCCCCccc-ceeeecCCCCCCcEEEEEceeecccchhhhhccCCCCCCCCccccccccEEEEEecCCCCCcccCC
Q 022313 11 LGWAARDPSGVLS-PYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGD 89 (299)
Q Consensus 11 ~~~~~~~~~~~~~-~~~~~~p~~~~~evlv~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd 89 (299)
+++.+.. ++... +++++.|++.++||+|||+++++|++|++.+.|.++. ..|.++|||++|+|+++|+++.+|++||
T Consensus 2 ka~~~~~-~~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~d~~~~~g~~~~-~~~~~~g~e~~G~V~~~G~~v~~~~~Gd 79 (338)
T PRK09422 2 KAAVVNK-DHTGDVVVEKTLRPLKHGEALVKMEYCGVCHTDLHVANGDFGD-KTGRILGHEGIGIVKEVGPGVTSLKVGD 79 (338)
T ss_pred eEEEecC-CCCCceEEEecCCCCCCCeEEEEEEEEeechhHHHHHcCCCCC-CCCccCCcccceEEEEECCCCccCCCCC
Confidence 3444433 34444 8899999999999999999999999999888776542 3367899999999999999999999999
Q ss_pred EEEEeccccCCCCCccccCCCCccccccccccccccCCCCccCCcceeeEEeecceEEEcCCCCCcccccccchhhHHHH
Q 022313 90 HVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVY 169 (299)
Q Consensus 90 ~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~ 169 (299)
+|.+.+...+|+.|.+|..+....|....+ . |....|++++|+.++.+.++++|+++++.+++.++..+.|+|
T Consensus 80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-----~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~l~~~~~ta~ 152 (338)
T PRK09422 80 RVSIAWFFEGCGHCEYCTTGRETLCRSVKN--A-----GYTVDGGMAEQCIVTADYAVKVPEGLDPAQASSITCAGVTTY 152 (338)
T ss_pred EEEEccCCCCCCCChhhcCCCcccCCCccc--c-----CccccCcceeEEEEchHHeEeCCCCCCHHHeehhhcchhHHH
Confidence 999888888999999999999999987642 1 223469999999999999999999999999999999999999
Q ss_pred HHhhhccCCCCCCEEEEEcCChHHHHHHHHHHH-CCCeEEEEeCCchHHHHHHHhcCCCEEEeCCC-H---HHHHHhcCC
Q 022313 170 TPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKA-FGLNVTVLSTSTSKKEEALSLLGADKFVVSSD-L---EQMKALGKS 244 (299)
Q Consensus 170 ~al~~~~~~~~g~~vlI~G~g~~G~~a~~~a~~-~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~-~---~~~~~~~~~ 244 (299)
+++. ...++++++|||+|+|++|++++++|+. .|++|+++++++++.+.+ +++|++.+++.++ . +.+.+..++
T Consensus 153 ~~~~-~~~~~~g~~vlV~g~g~vG~~~~~la~~~~g~~v~~~~~~~~~~~~~-~~~g~~~v~~~~~~~~~~~~v~~~~~~ 230 (338)
T PRK09422 153 KAIK-VSGIKPGQWIAIYGAGGLGNLALQYAKNVFNAKVIAVDINDDKLALA-KEVGADLTINSKRVEDVAKIIQEKTGG 230 (338)
T ss_pred HHHH-hcCCCCCCEEEEECCcHHHHHHHHHHHHhCCCeEEEEeCChHHHHHH-HHcCCcEEecccccccHHHHHHHhcCC
Confidence 9984 4456999999999999999999999998 499999999999998888 7899999888753 2 233344457
Q ss_pred ccEEEEcCCCchhHHHHHHhcccCcEEEEEcCC-CceeeChhhhhcCCeeeeee
Q 022313 245 LDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP-SKVKFSPASLNIGNAPLFRF 297 (299)
Q Consensus 245 ~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~-~~~~~~~~~l~~~~~~~~g~ 297 (299)
+|+++++.++...+..++++++++|+++.+|.. ...+++...+..+++++.|+
T Consensus 231 ~d~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~ 284 (338)
T PRK09422 231 AHAAVVTAVAKAAFNQAVDAVRAGGRVVAVGLPPESMDLSIPRLVLDGIEVVGS 284 (338)
T ss_pred CcEEEEeCCCHHHHHHHHHhccCCCEEEEEeeCCCCceecHHHHhhcCcEEEEe
Confidence 896655555556699999999999999999977 55667777788888888774
No 42
>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase. Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me
Probab=100.00 E-value=6.4e-35 Score=265.28 Aligned_cols=284 Identities=26% Similarity=0.396 Sum_probs=235.1
Q ss_pred eEEeeeCCCCcccceeeecCCCCCCcEEEEEceeecccchhhhhccCCCCCCCCccccccccEEEEEecCCCCCcccCCE
Q 022313 11 LGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDH 90 (299)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~ 90 (299)
+++.+....+.+++++++.|++.++||+|++.++++|+.|...+.|.++ ..+|.++|+|++|+|+++|+++..|++||+
T Consensus 2 ~a~~~~~~~~~~~~~~~~~p~~~~~~v~i~v~~~~i~~~d~~~~~g~~~-~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~ 80 (363)
T cd08279 2 RAAVLHEVGKPLEIEEVELDDPGPGEVLVRIAAAGLCHSDLHVVTGDLP-APLPAVLGHEGAGVVEEVGPGVTGVKPGDH 80 (363)
T ss_pred eEEEEecCCCCceEEEeeCCCCCCCeEEEEEEEeecCcHHHHHhcCCCC-CCCCccccccceEEEEEeCCCccccCCCCE
Confidence 4566655556789999999999999999999999999999998887665 356778999999999999999999999999
Q ss_pred EEEeccccCCCCCccccCCCCccccccccccccccC--------CC-----CccCCcceeeEEeecceEEEcCCCCCccc
Q 022313 91 VGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDA--------DG-----TITKGGYSSYIVVHERYCYKIANDYPLAL 157 (299)
Q Consensus 91 V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~--------~g-----~~~~g~~~~~~~~~~~~~~~~p~~~~~~~ 157 (299)
|...+. .+|++|.+|+++...+|.+..+..++... +| ....|+|++|+.++.+.++++|+++++++
T Consensus 81 V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~ 159 (363)
T cd08279 81 VVLSWI-PACGTCRYCSRGQPNLCDLGAGILGGQLPDGTRRFTADGEPVGAMCGLGTFAEYTVVPEASVVKIDDDIPLDR 159 (363)
T ss_pred EEECCC-CCCCCChhhcCCCcccCcccccccccccCCCcccccccCccccccccCccceeeEEeccccEEECCCCCChHH
Confidence 987655 49999999999999999875432222111 11 12469999999999999999999999999
Q ss_pred ccccchhhHHHHHHhhhccCCCCCCEEEEEcCChHHHHHHHHHHHCCCe-EEEEeCCchHHHHHHHhcCCCEEEeCCCHH
Q 022313 158 AAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLN-VTVLSTSTSKKEEALSLLGADKFVVSSDLE 236 (299)
Q Consensus 158 aa~~~~~~~ta~~al~~~~~~~~g~~vlI~G~g~~G~~a~~~a~~~g~~-v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~ 236 (299)
++.+++.+.++|.++.....+.++++|+|+|+|++|++++++|+..|++ |+++++++++.+.+ +++|++++++.+...
T Consensus 160 aa~~~~~~~ta~~~~~~~~~~~~g~~vLI~g~g~vG~a~i~lak~~G~~~Vi~~~~~~~~~~~~-~~~g~~~vv~~~~~~ 238 (363)
T cd08279 160 AALLGCGVTTGVGAVVNTARVRPGDTVAVIGCGGVGLNAIQGARIAGASRIIAVDPVPEKLELA-RRFGATHTVNASEDD 238 (363)
T ss_pred eehhcchhHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHH-HHhCCeEEeCCCCcc
Confidence 9999999999999987777779999999998899999999999999995 88988888888777 689999988776533
Q ss_pred H---HHHh--cCCccEEEEcCCCchhHHHHHHhcccCcEEEEEcCC---CceeeChhhhhcCCeeeeee
Q 022313 237 Q---MKAL--GKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP---SKVKFSPASLNIGNAPLFRF 297 (299)
Q Consensus 237 ~---~~~~--~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~---~~~~~~~~~l~~~~~~~~g~ 297 (299)
. +.++ .+++|+++|++++......++++++++|+++.+|.. ....++..++..++..+.++
T Consensus 239 ~~~~l~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (363)
T cd08279 239 AVEAVRDLTDGRGADYAFEAVGRAATIRQALAMTRKGGTAVVVGMGPPGETVSLPALELFLSEKRLQGS 307 (363)
T ss_pred HHHHHHHHcCCCCCCEEEEcCCChHHHHHHHHHhhcCCeEEEEecCCCCcccccCHHHHhhcCcEEEEE
Confidence 2 3333 367999999999766689999999999999999876 35567777777677776654
No 43
>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase. 6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy
Probab=100.00 E-value=6.8e-35 Score=263.80 Aligned_cols=278 Identities=30% Similarity=0.458 Sum_probs=231.8
Q ss_pred eEEeeeCCCCcccceeeecCCCCCCcEEEEEceeecccchhhhhccCCC------------CCCCCccccccccEEEEEe
Q 022313 11 LGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG------------DSKYPLVPGHEIVGIVKEV 78 (299)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~D~~~~~g~~~------------~~~~p~~lG~e~~G~V~~v 78 (299)
+++.+......+++.+++.|++.++||+|++.++++|++|++.+.|.++ ....|.++|+|++|+|+++
T Consensus 2 ~a~~~~~~~~~~~~~~~~~p~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~v 81 (350)
T cd08240 2 KAAAVVEPGKPLEEVEIDTPKPPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDDRGVKLPLVLGHEIVGEVVAV 81 (350)
T ss_pred eeEEeccCCCCceEEecCCCCCCCCeEEEEEEEEecCchhHHHHcCCCCccccccccccccCCCCCcccccceeEEEEee
Confidence 4555555556688999999999999999999999999999998877543 1234678999999999999
Q ss_pred cCCCCCcccCCEEEEeccccCCCCCccccCCCCccccccccccccccCCCCccCCcceeeEEeecceEEEcCCCCCcccc
Q 022313 79 GHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALA 158 (299)
Q Consensus 79 G~~v~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~a 158 (299)
|+++..+++||+|...+.. .|+.|..|.++++.+|....+. |....|++++|+.++.+.++++|+++++.++
T Consensus 82 G~~v~~~~~Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~~~~~~~~~~p~~~s~~~a 153 (350)
T cd08240 82 GPDAADVKVGDKVLVYPWI-GCGECPVCLAGDENLCAKGRAL-------GIFQDGGYAEYVIVPHSRYLVDPGGLDPALA 153 (350)
T ss_pred CCCCCCCCCCCEEEECCcC-CCCCChHHHCcCcccCCCCCce-------eeeccCcceeeEEecHHHeeeCCCCCCHHHe
Confidence 9999999999999876654 8999999999999999765322 1124689999999999999999999999999
Q ss_pred cccchhhHHHHHHhhhccCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCchHHHHHHHhcCCCEEEeCCCHHH
Q 022313 159 APLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKFVVSSDLEQ 237 (299)
Q Consensus 159 a~~~~~~~ta~~al~~~~~~~~g~~vlI~G~g~~G~~a~~~a~~~g~-~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~ 237 (299)
+.+.+.+.+||+++.....++++++|+|+|+|++|++++|+|+..|+ +|++++.++++.+.+ +++|++.+++.++.+.
T Consensus 154 a~l~~~~~tA~~~~~~~~~~~~~~~vlI~g~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~ 232 (350)
T cd08240 154 ATLACSGLTAYSAVKKLMPLVADEPVVIIGAGGLGLMALALLKALGPANIIVVDIDEAKLEAA-KAAGADVVVNGSDPDA 232 (350)
T ss_pred ehhhchhhhHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH-HHhCCcEEecCCCccH
Confidence 99999999999999888776789999999889999999999999999 788888888888877 7899988887765332
Q ss_pred ---HHHh-cCCccEEEEcCCCchhHHHHHHhcccCcEEEEEcCC-CceeeChhhhhcCCeeeeee
Q 022313 238 ---MKAL-GKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP-SKVKFSPASLNIGNAPLFRF 297 (299)
Q Consensus 238 ---~~~~-~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~-~~~~~~~~~l~~~~~~~~g~ 297 (299)
+.+. .+++|+++|++|.......++++++++|+++.+|.. ....++...+.++++++.++
T Consensus 233 ~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~i~~~ 297 (350)
T cd08240 233 AKRIIKAAGGGVDAVIDFVNNSATASLAFDILAKGGKLVLVGLFGGEATLPLPLLPLRALTIQGS 297 (350)
T ss_pred HHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhhcCCeEEEECCCCCCCcccHHHHhhcCcEEEEc
Confidence 3333 247999999999766699999999999999999877 33344555556688888875
No 44
>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty
Probab=100.00 E-value=1.3e-34 Score=261.41 Aligned_cols=278 Identities=27% Similarity=0.417 Sum_probs=234.6
Q ss_pred eEEeeeCCCCcccceeeecCCCCCCcEEEEEceeecccchhhhhccCCCCCCCCccccccccEEEEEecCCCCCcccCCE
Q 022313 11 LGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDH 90 (299)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~ 90 (299)
+++.+......+++++++.|.+.++||+||+.++++|++|+..+.|..+....|.++|+|++|.|+.+|+++..|++||+
T Consensus 2 ~a~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~~G~~~~~~~~Gd~ 81 (345)
T cd08260 2 RAAVYEEFGEPLEIREVPDPEPPPDGVVVEVEACGVCRSDWHGWQGHDPDVTLPHVPGHEFAGVVVEVGEDVSRWRVGDR 81 (345)
T ss_pred eeEEEecCCCCcEEEEccCCCCCCCeEEEEEEEeeccHHHHHHhcCCCCCCCCCeeeccceeEEEEEECCCCccCCCCCE
Confidence 55555444456888999999999999999999999999999888887654456788999999999999999999999999
Q ss_pred EEEeccccCCCCCccccCCCCccccccccccccccCCCCccCCcceeeEEeecc--eEEEcCCCCCcccccccchhhHHH
Q 022313 91 VGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHER--YCYKIANDYPLALAAPLLCAGITV 168 (299)
Q Consensus 91 V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~--~~~~~p~~~~~~~aa~~~~~~~ta 168 (299)
|.. +....|++|.+|..+..+.|.+..+. +....|+|++|+.+++. .++++|+++++++++.++..+.++
T Consensus 82 V~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~v~~~~~~~~~iP~~~~~~~aa~l~~~~~ta 153 (345)
T cd08260 82 VTV-PFVLGCGTCPYCRAGDSNVCEHQVQP-------GFTHPGSFAEYVAVPRADVNLVRLPDDVDFVTAAGLGCRFATA 153 (345)
T ss_pred EEE-CCCCCCCCCccccCcCcccCCCCccc-------ccCCCCcceeEEEcccccCceEECCCCCCHHHhhhhccchHHH
Confidence 977 44468999999999999999986321 11235899999999974 899999999999999999999999
Q ss_pred HHHhhhccCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEEeCCC-HHHH---HHh-cC
Q 022313 169 YTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSD-LEQM---KAL-GK 243 (299)
Q Consensus 169 ~~al~~~~~~~~g~~vlI~G~g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~-~~~~---~~~-~~ 243 (299)
|+++.....+.++++|+|+|+|++|++++++|+..|.+|+++++++++.+.+ +++|++++++.++ .+.. ..+ .+
T Consensus 154 ~~~l~~~~~~~~~~~vlV~g~g~vg~~~~~~a~~~G~~vi~~~~~~~~~~~~-~~~g~~~~i~~~~~~~~~~~~~~~~~~ 232 (345)
T cd08260 154 FRALVHQARVKPGEWVAVHGCGGVGLSAVMIASALGARVIAVDIDDDKLELA-RELGAVATVNASEVEDVAAAVRDLTGG 232 (345)
T ss_pred HHHHHHccCCCCCCEEEEECCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH-HHhCCCEEEccccchhHHHHHHHHhCC
Confidence 9998766667899999999999999999999999999999999999988888 6799999998776 3322 222 24
Q ss_pred CccEEEEcCCCchhHHHHHHhcccCcEEEEEcCC--Cc--eeeChhhhhcCCeeeeee
Q 022313 244 SLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP--SK--VKFSPASLNIGNAPLFRF 297 (299)
Q Consensus 244 ~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~--~~--~~~~~~~l~~~~~~~~g~ 297 (299)
++|++||++|+......++++++++|+++.+|.. .. ..+++..++.+++++.++
T Consensus 233 ~~d~vi~~~g~~~~~~~~~~~l~~~g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (345)
T cd08260 233 GAHVSVDALGIPETCRNSVASLRKRGRHVQVGLTLGEEAGVALPMDRVVARELEIVGS 290 (345)
T ss_pred CCCEEEEcCCCHHHHHHHHHHhhcCCEEEEeCCcCCCCCccccCHHHHhhcccEEEeC
Confidence 7999999999755688999999999999999987 22 466766777888888875
No 45
>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like. This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (
Probab=100.00 E-value=8e-35 Score=262.78 Aligned_cols=276 Identities=24% Similarity=0.366 Sum_probs=231.1
Q ss_pred EEeeeCCCCcccceeeecCCC-CCCcEEEEEceeecccchhhhhccCCCCCCCCccccccccEEEEEecCCCCCcccCCE
Q 022313 12 GWAARDPSGVLSPYSFNRRAV-GSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDH 90 (299)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~p~~-~~~evlv~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~ 90 (299)
++.+. .++.+++++++.|++ .++||+||++++++|++|+..+.|.++..+.|.++|||++|+|+++|+++.++++||+
T Consensus 3 a~~~~-~~~~~~~~~~~~p~~~~~~ev~v~v~a~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~~Gd~ 81 (345)
T cd08286 3 ALVYH-GPGKISWEDRPKPTIQEPTDAIVKMLKTTICGTDLHILKGDVPTVTPGRILGHEGVGVVEEVGSAVTNFKVGDR 81 (345)
T ss_pred eEEEe-cCCceeEEecCCCCCCCCCeEEEEEEEeeecchhhHHHcCCCCCCCCCceecccceEEEEEeccCccccCCCCE
Confidence 44443 455699999999986 8999999999999999999998887654455789999999999999999999999999
Q ss_pred EEEeccccCCCCCccccCCCCccccccccccccccCCCCccCCcceeeEEeecc--eEEEcCCCCCcccccccchhhHHH
Q 022313 91 VGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHER--YCYKIANDYPLALAAPLLCAGITV 168 (299)
Q Consensus 91 V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~--~~~~~p~~~~~~~aa~~~~~~~ta 168 (299)
|++.+.. .|+.|.+|..+.+..|....+.. |....|+|++|+.++.+ .++++|++++..+++.+++.+.++
T Consensus 82 V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~------~~~~~g~~~~~~~v~~~~~~~~~lp~~~~~~~aa~l~~~~~ta 154 (345)
T cd08286 82 VLISCIS-SCGTCGYCRKGLYSHCESGGWIL------GNLIDGTQAEYVRIPHADNSLYKLPEGVDEEAAVMLSDILPTG 154 (345)
T ss_pred EEECCcC-CCCCChHHHCcCcccCCCccccc------ccccCCeeeeEEEcccccCceEECCCCCCHHHhhhccchhHHH
Confidence 9876554 79999999999999998764421 22346999999999987 899999999999999999999999
Q ss_pred HHHhhhccCCCCCCEEEEEcCChHHHHHHHHHHHCC-CeEEEEeCCchHHHHHHHhcCCCEEEeCCCHHH---HHHh--c
Q 022313 169 YTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFG-LNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQ---MKAL--G 242 (299)
Q Consensus 169 ~~al~~~~~~~~g~~vlI~G~g~~G~~a~~~a~~~g-~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~---~~~~--~ 242 (299)
|.++.....+.++++|||.|+|.+|++++|+|+..| .+++++++++++.+.+ +++|++++++..+.+. +.+. .
T Consensus 155 ~~~~~~~~~~~~g~~vlI~g~g~~g~~~~~~a~~~G~~~v~~~~~~~~~~~~~-~~~g~~~~v~~~~~~~~~~i~~~~~~ 233 (345)
T cd08286 155 YECGVLNGKVKPGDTVAIVGAGPVGLAALLTAQLYSPSKIIMVDLDDNRLEVA-KKLGATHTVNSAKGDAIEQVLELTDG 233 (345)
T ss_pred HHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHhCCCceeccccccHHHHHHHHhCC
Confidence 987666666799999999988999999999999999 6888887777776666 6899999988765332 2222 2
Q ss_pred CCccEEEEcCCCchhHHHHHHhcccCcEEEEEcCC-CceeeChhhhhcCCeeeee
Q 022313 243 KSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP-SKVKFSPASLNIGNAPLFR 296 (299)
Q Consensus 243 ~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~-~~~~~~~~~l~~~~~~~~g 296 (299)
+++|+++|++++......+++.++++|+++.+|.. ...++++..++.|++++.+
T Consensus 234 ~~~d~vld~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~ 288 (345)
T cd08286 234 RGVDVVIEAVGIPATFELCQELVAPGGHIANVGVHGKPVDLHLEKLWIKNITITT 288 (345)
T ss_pred CCCCEEEECCCCHHHHHHHHHhccCCcEEEEecccCCCCCcCHHHHhhcCcEEEe
Confidence 57999999999876688899999999999999976 4566777777888988876
No 46
>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T
Probab=100.00 E-value=1.2e-34 Score=265.42 Aligned_cols=283 Identities=22% Similarity=0.275 Sum_probs=228.6
Q ss_pred eEEeeeCCCCcccceeeecCCC-CCCcEEEEEceeecccchhhhhccCCCCCCCCccccccccEEEEEecCCCCCcccCC
Q 022313 11 LGWAARDPSGVLSPYSFNRRAV-GSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGD 89 (299)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~p~~-~~~evlv~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd 89 (299)
+++.+. .++.+++.+.+.|.+ ++++|+||+.++++|++|++.+.|.++..+.|.++|||++|+|+++|+++.++++||
T Consensus 2 ~a~~~~-~~~~~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd 80 (386)
T cd08283 2 KALVWH-GKGDVRVEEVPDPKIEDPTDAIVRVTATAICGSDLHLYHGYIPGMKKGDILGHEFMGVVEEVGPEVRNLKVGD 80 (386)
T ss_pred eeEEEe-cCCCceEEeCCCCCCCCCCeEEEEEEEEecchhhhhhhcCCCCCCCCCccccccceEEEEEeCCCCCCCCCCC
Confidence 345553 567899999999998 499999999999999999999988776555688999999999999999999999999
Q ss_pred EEEEeccccCCCCCccccCCCCcccccccccc-----cccc---CCC-----CccCCcceeeEEeecc--eEEEcCCCCC
Q 022313 90 HVGVGTYVNSCRDCEYCNDGLEVHCARSVYTF-----NAID---ADG-----TITKGGYSSYIVVHER--YCYKIANDYP 154 (299)
Q Consensus 90 ~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~-----~~~~---~~g-----~~~~g~~~~~~~~~~~--~~~~~p~~~~ 154 (299)
+|+..+.. .||+|.+|+.+.+++|++..... .|+. ..| ....|+|++|+.++.+ .++++|++++
T Consensus 81 ~V~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lp~~~~ 159 (386)
T cd08283 81 RVVVPFTI-ACGECFYCKRGLYSQCDNTNPSAEMAKLYGHAGAGIFGYSHLTGGYAGGQAEYVRVPFADVGPFKIPDDLS 159 (386)
T ss_pred EEEEcCcC-CCCCChhhcCCCcccCCCcccccccccccccccccccccccccCCCCCeeEEEEEcccccCeEEECCCCCC
Confidence 99876554 79999999999999998753221 0000 001 1236999999999987 8999999999
Q ss_pred cccccccchhhHHHHHHhhhccCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCchHHHHHHHhcCCCEEEeCC
Q 022313 155 LALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKFVVSS 233 (299)
Q Consensus 155 ~~~aa~~~~~~~ta~~al~~~~~~~~g~~vlI~G~g~~G~~a~~~a~~~g~-~v~~~~~~~~~~~~~~~~~g~~~v~~~~ 233 (299)
+++++.++..+.++|+++ ....++++++|||+|+|.+|++++++|+..|+ +++++++++++.+.+ ++++...+++..
T Consensus 160 ~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~g~G~vG~~~~~la~~~g~~~vi~~~~~~~~~~~~-~~~~~~~vi~~~ 237 (386)
T cd08283 160 DEKALFLSDILPTGYHAA-ELAEVKPGDTVAVWGCGPVGLFAARSAKLLGAERVIAIDRVPERLEMA-RSHLGAETINFE 237 (386)
T ss_pred HHHHhhhccchhhhHHHH-hhccCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH-HHcCCcEEEcCC
Confidence 999999999999999998 55566999999999889999999999999998 699999998888888 566434566655
Q ss_pred CHH-H---HHHhc--CCccEEEEcCCCc---------------------hhHHHHHHhcccCcEEEEEcCC-C-ceeeCh
Q 022313 234 DLE-Q---MKALG--KSLDFIIDTASGD---------------------HPFDAYMSLLKVAGVYVLVGFP-S-KVKFSP 284 (299)
Q Consensus 234 ~~~-~---~~~~~--~~~d~v~d~~g~~---------------------~~~~~~~~~l~~~G~~v~~g~~-~-~~~~~~ 284 (299)
..+ . +.++. +++|++||++|+. ..++.++++++++|+++.+|.. . ...+++
T Consensus 238 ~~~~~~~~l~~~~~~~~~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~ 317 (386)
T cd08283 238 EVDDVVEALRELTGGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAIQAVRKGGTVSIIGVYGGTVNKFPI 317 (386)
T ss_pred cchHHHHHHHHHcCCCCCCEEEECCCCcccccccccccccccccccCchHHHHHHHHHhccCCEEEEEcCCCCCcCccCH
Confidence 432 2 22332 4799999999853 2478899999999999999987 2 345666
Q ss_pred hhhhcCCeeeeee
Q 022313 285 ASLNIGNAPLFRF 297 (299)
Q Consensus 285 ~~l~~~~~~~~g~ 297 (299)
..++.|++++.+.
T Consensus 318 ~~~~~~~~~i~~~ 330 (386)
T cd08283 318 GAAMNKGLTLRMG 330 (386)
T ss_pred HHHHhCCcEEEec
Confidence 6678888888774
No 47
>PRK13771 putative alcohol dehydrogenase; Provisional
Probab=100.00 E-value=8.3e-35 Score=261.42 Aligned_cols=274 Identities=26% Similarity=0.396 Sum_probs=229.3
Q ss_pred eEEeeeCCCCcccceeeecCCCCCCcEEEEEceeecccchhhhhccCCCCCCCCccccccccEEEEEecCCCCCcccCCE
Q 022313 11 LGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDH 90 (299)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~ 90 (299)
+++.+.+.++.+++++++.|++.++|++||++++++|++|++...|.++..++|.++|||++|+|+++|+++..+++||+
T Consensus 2 ~a~~~~~~~~~~~~~~~~~~~~~~~~v~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~G~~ 81 (334)
T PRK13771 2 KAVILPGFKQGYRIEEVPDPKPGKDEVVIKVNYAGLCYRDLLQLQGFYPRMKYPVILGHEVVGTVEEVGENVKGFKPGDR 81 (334)
T ss_pred eeEEEcCCCCCcEEEeCCCCCCCCCeEEEEEEEEeechhhHHHhcCCCCCCCCCeeccccceEEEEEeCCCCccCCCCCE
Confidence 34555445555999999999999999999999999999999888876654456788999999999999999988999999
Q ss_pred EEEeccccCCCCCccccCCCCccccccccccccccCCCCccCCcceeeEEeecceEEEcCCCCCcccccccchhhHHHHH
Q 022313 91 VGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYT 170 (299)
Q Consensus 91 V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~ 170 (299)
|++.+. .+|+.|++|..+.++.|+...+. |....|+|++|+.++.+.++++|+++++.+++.+.+.+.++|+
T Consensus 82 V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~~a~l~~~~~~a~~ 153 (334)
T PRK13771 82 VASLLY-APDGTCEYCRSGEEAYCKNRLGY-------GEELDGFFAEYAKVKVTSLVKVPPNVSDEGAVIVPCVTGMVYR 153 (334)
T ss_pred EEECCC-CCCcCChhhcCCCcccCcccccc-------ccccCceeeeeeecchhceEECCCCCCHHHhhcccchHHHHHH
Confidence 987655 49999999999999999886432 2234699999999999999999999999999999999999999
Q ss_pred HhhhccCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEEeCCC-HHHHHHhcCCccEE
Q 022313 171 PMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSD-LEQMKALGKSLDFI 248 (299)
Q Consensus 171 al~~~~~~~~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~-~~~~~~~~~~~d~v 248 (299)
++... .++++++|+|+|+ |.+|++++++|+..|++++++++++++.+.+ +++ ++++++.++ .+.+.+. .++|++
T Consensus 154 ~~~~~-~~~~~~~vlI~g~~g~~g~~~~~la~~~g~~vi~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~v~~~-~~~d~~ 229 (334)
T PRK13771 154 GLRRA-GVKKGETVLVTGAGGGVGIHAIQVAKALGAKVIAVTSSESKAKIV-SKY-ADYVIVGSKFSEEVKKI-GGADIV 229 (334)
T ss_pred HHHhc-CCCCCCEEEEECCCccHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHH-HHHhcCchhHHHHHHhc-CCCcEE
Confidence 98877 6699999999998 9999999999999999999999998888887 567 766665542 1223333 479999
Q ss_pred EEcCCCchhHHHHHHhcccCcEEEEEcCC-Cce--eeChhhhhcCCeeeeee
Q 022313 249 IDTASGDHPFDAYMSLLKVAGVYVLVGFP-SKV--KFSPASLNIGNAPLFRF 297 (299)
Q Consensus 249 ~d~~g~~~~~~~~~~~l~~~G~~v~~g~~-~~~--~~~~~~l~~~~~~~~g~ 297 (299)
+|++|+.. ...++++++++|+++.+|.. ... +++...++.+++++.++
T Consensus 230 ld~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (334)
T PRK13771 230 IETVGTPT-LEESLRSLNMGGKIIQIGNVDPSPTYSLRLGYIILKDIEIIGH 280 (334)
T ss_pred EEcCChHH-HHHHHHHHhcCCEEEEEeccCCCCCcccCHHHHHhcccEEEEe
Confidence 99999875 88999999999999999977 221 34455556788888774
No 48
>cd05278 FDH_like Formaldehyde dehydrogenases. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall
Probab=100.00 E-value=1.4e-34 Score=261.22 Aligned_cols=277 Identities=22% Similarity=0.340 Sum_probs=225.9
Q ss_pred EEeeeCCCCcccceeeecCCC-CCCcEEEEEceeecccchhhhhccCCCCCCCCccccccccEEEEEecCCCCCcccCCE
Q 022313 12 GWAARDPSGVLSPYSFNRRAV-GSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDH 90 (299)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~p~~-~~~evlv~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~ 90 (299)
++.+. .++.+++.+++.|++ .++||+||+.++++|++|++.+.|.++..+.|.++|+|++|+|+++|+++.++++||+
T Consensus 3 a~~~~-~~~~~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~ 81 (347)
T cd05278 3 ALVYL-GPGKIGLEEVPDPKIQGPHDAIVRVTATSICGSDLHIYRGGVPGAKHGMILGHEFVGEVVEVGSDVKRLKPGDR 81 (347)
T ss_pred eEEEe-cCCceEEEEcCCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCCCCCCceeccceEEEEEEECCCccccCCCCE
Confidence 45553 456688999999999 9999999999999999999988887765566889999999999999999999999999
Q ss_pred EEEeccccCCCCCccccCCCCccccccccccccccCCCCccCCcceeeEEeecc--eEEEcCCCCCcccccccchhhHHH
Q 022313 91 VGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHER--YCYKIANDYPLALAAPLLCAGITV 168 (299)
Q Consensus 91 V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~--~~~~~p~~~~~~~aa~~~~~~~ta 168 (299)
|...+. +.||.|.+|..+...+|....+... .+....|+|++|+.++++ .++++|+++++++++.+++++.||
T Consensus 82 V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~g~~~~~~~v~~~~~~~~~lP~~~~~~~aa~l~~~~~ta 156 (347)
T cd05278 82 VSVPCI-TFCGRCRFCRRGYHAHCENGLWGWK----LGNRIDGGQAEYVRVPYADMNLAKIPDGLPDEDALMLSDILPTG 156 (347)
T ss_pred EEecCC-CCCCCChhHhCcCcccCcCCCcccc----cccCCCCeeeEEEEecchhCeEEECCCCCCHHHHhhhcchhhhe
Confidence 987644 5899999999999999987543321 122346999999999987 899999999999999999999999
Q ss_pred HHHhhhccCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCchHHHHHHHhcCCCEEEeCCCHHH---HHHhc--
Q 022313 169 YTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKFVVSSDLEQ---MKALG-- 242 (299)
Q Consensus 169 ~~al~~~~~~~~g~~vlI~G~g~~G~~a~~~a~~~g~-~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~---~~~~~-- 242 (299)
|+++. ...++++++|||.|+|.+|++++|+|+..|. +++++++++++.+.+ +++|++++++.++.+. +....
T Consensus 157 ~~~~~-~~~~~~~~~VlI~g~g~vg~~~iqlak~~g~~~v~~~~~~~~~~~~~-~~~g~~~vi~~~~~~~~~~i~~~~~~ 234 (347)
T cd05278 157 FHGAE-LAGIKPGSTVAVIGAGPVGLCAVAGARLLGAARIIAVDSNPERLDLA-KEAGATDIINPKNGDIVEQILELTGG 234 (347)
T ss_pred eehhh-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHH-HHhCCcEEEcCCcchHHHHHHHHcCC
Confidence 99984 4566999999998889999999999999996 888887777777666 6899999988776433 22222
Q ss_pred CCccEEEEcCCCchhHHHHHHhcccCcEEEEEcCC-Cceee-ChhhhhcCCeeeee
Q 022313 243 KSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP-SKVKF-SPASLNIGNAPLFR 296 (299)
Q Consensus 243 ~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~-~~~~~-~~~~l~~~~~~~~g 296 (299)
+++|++||++++...+..++++++++|+++.+|.. ..... .....+.+++++.+
T Consensus 235 ~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~ 290 (347)
T cd05278 235 RGVDCVIEAVGFEETFEQAVKVVRPGGTIANVGVYGKPDPLPLLGEWFGKNLTFKT 290 (347)
T ss_pred CCCcEEEEccCCHHHHHHHHHHhhcCCEEEEEcCCCCCcccCccchhhhceeEEEe
Confidence 57999999999855589999999999999999866 22211 11233456776665
No 49
>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family. This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous
Probab=100.00 E-value=1.9e-34 Score=256.25 Aligned_cols=277 Identities=24% Similarity=0.404 Sum_probs=228.4
Q ss_pred EEeeeCC-CCcccceeeecCCCCCCcEEEEEceeecccchhhhhccCCCCCCCCccccccccEEEEEecCCCCCcccCCE
Q 022313 12 GWAARDP-SGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDH 90 (299)
Q Consensus 12 ~~~~~~~-~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~ 90 (299)
++...+. ++.+++++++.|++.++||+|||.++++|++|.+...+.+.....|.++|+|++|+|+.+|+++..|++||+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~p~~~~~~v~V~v~~~~l~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~ 82 (306)
T cd08258 3 ALVKTGPGPGNVELREVPEPEPGPGEVLIKVAAAGICGSDLHIYKGDYDPVETPVVLGHEFSGTIVEVGPDVEGWKVGDR 82 (306)
T ss_pred eEEEecCCCCceEEeecCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCcCCCCeeeccceEEEEEEECCCcCcCCCCCE
Confidence 4444443 356899999999999999999999999999999888776533345778999999999999999999999999
Q ss_pred EEEeccccCCCCCccccCCCCccccccccccccccCCCCccCCcceeeEEeecceEEEcCCCCCcccccccchhhHHHHH
Q 022313 91 VGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYT 170 (299)
Q Consensus 91 V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~ 170 (299)
|...+..+.|+.|.+|..+.+..|+..... |....|+|++|+.++...++++|+++++.+++ +...+.++|+
T Consensus 83 V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa-~~~~~~~a~~ 154 (306)
T cd08258 83 VVSETTFSTCGRCPYCRRGDYNLCPHRKGI-------GTQADGGFAEYVLVPEESLHELPENLSLEAAA-LTEPLAVAVH 154 (306)
T ss_pred EEEccCcCCCCCCcchhCcCcccCCCCcee-------eecCCCceEEEEEcchHHeEECcCCCCHHHHH-hhchHHHHHH
Confidence 988776779999999999999999864211 12345899999999999999999999999876 7778889999
Q ss_pred HhhhccCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCC-ch-HHHHHHHhcCCCEEEeCCCHHH---HHHh--cC
Q 022313 171 PMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTS-TS-KKEEALSLLGADKFVVSSDLEQ---MKAL--GK 243 (299)
Q Consensus 171 al~~~~~~~~g~~vlI~G~g~~G~~a~~~a~~~g~~v~~~~~~-~~-~~~~~~~~~g~~~v~~~~~~~~---~~~~--~~ 243 (299)
++.....++++++|||.|+|.+|++++++|+..|++|+++..+ ++ +.+.+ +++|++++ +....+. +... .+
T Consensus 155 ~l~~~~~~~~g~~vlI~g~g~~g~~~~~la~~~G~~v~~~~~~~~~~~~~~~-~~~g~~~~-~~~~~~~~~~l~~~~~~~ 232 (306)
T cd08258 155 AVAERSGIRPGDTVVVFGPGPIGLLAAQVAKLQGATVVVVGTEKDEVRLDVA-KELGADAV-NGGEEDLAELVNEITDGD 232 (306)
T ss_pred HHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHH-HHhCCccc-CCCcCCHHHHHHHHcCCC
Confidence 9877777799999999888999999999999999998877433 33 44444 78998877 6654332 2222 25
Q ss_pred CccEEEEcCCCchhHHHHHHhcccCcEEEEEcCC--CceeeChhhhhcCCeeeeeec
Q 022313 244 SLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP--SKVKFSPASLNIGNAPLFRFK 298 (299)
Q Consensus 244 ~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~--~~~~~~~~~l~~~~~~~~g~~ 298 (299)
++|+++|+.|+.......++.++++|+++.+|.. ....++...++.|+++++|+.
T Consensus 233 ~vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~ 289 (306)
T cd08258 233 GADVVIECSGAVPALEQALELLRKGGRIVQVGIFGPLAASIDVERIIQKELSVIGSR 289 (306)
T ss_pred CCCEEEECCCChHHHHHHHHHhhcCCEEEEEcccCCCCcccCHHHHhhcCcEEEEEe
Confidence 7999999998766688999999999999999998 367778888889999999974
No 50
>cd08246 crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma
Probab=100.00 E-value=1.3e-34 Score=266.00 Aligned_cols=268 Identities=19% Similarity=0.261 Sum_probs=221.8
Q ss_pred cccceeeecCCCCCCcEEEEEceeecccchhhhhccCCC----------CCCCCccccccccEEEEEecCCCCCcccCCE
Q 022313 21 VLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG----------DSKYPLVPGHEIVGIVKEVGHNVSRFKVGDH 90 (299)
Q Consensus 21 ~~~~~~~~~p~~~~~evlv~v~~~~i~~~D~~~~~g~~~----------~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~ 90 (299)
.+++++++.|+++++||+||+.++++|++|++...+... ....+.++|||++|+|+++|++++.+++||+
T Consensus 29 ~~~~~~~~~p~l~~~evlI~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~ 108 (393)
T cd08246 29 AIQLEDVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAARQRRGRDEPYHIGGSDASGIVWAVGEGVKNWKVGDE 108 (393)
T ss_pred ceEEeecCCCCCCCCEEEEEEEEEeeccchhhhhcCCCccccccccccCCCCCccccccceEEEEEEeCCCCCcCCCCCE
Confidence 578899999999999999999999999999887766411 0112347899999999999999999999999
Q ss_pred EEEeccccCCCCCccccCCCCccccccccccccccCCCCccCCcceeeEEeecceEEEcCCCCCcccccccchhhHHHHH
Q 022313 91 VGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYT 170 (299)
Q Consensus 91 V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~ 170 (299)
|.+.+. ..|+.|..|..+.+.+|.... +.|.. ...|+|++|+.++...++++|+++++++++.+++++.|+|+
T Consensus 109 V~~~~~-~~~~~~~~c~~~~~~~~~~~~--~~g~~----~~~g~~a~y~~v~~~~l~~iP~~l~~~~aa~l~~~~~tA~~ 181 (393)
T cd08246 109 VVVHCS-VWDGNDPERAGGDPMFDPSQR--IWGYE----TNYGSFAQFALVQATQLMPKPKHLSWEEAAAYMLVGATAYR 181 (393)
T ss_pred EEEecc-ccccCcccccccccccccccc--ccccc----CCCCcceeEEEechHHeEECCCCCCHHHHhhhcccHHHHHH
Confidence 987654 479999999999999998643 22221 24699999999999999999999999999999999999999
Q ss_pred Hhhhc--cCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEEeCCCH------------
Q 022313 171 PMMRH--KMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDL------------ 235 (299)
Q Consensus 171 al~~~--~~~~~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~------------ 235 (299)
++... ..++++++|+|+|+ |++|++++++|+..|++++++++++++.+.+ +++|++++++.++.
T Consensus 182 al~~~~~~~~~~g~~vlV~ga~g~iG~a~~~lak~~G~~vv~~~~s~~~~~~~-~~~G~~~~i~~~~~~~~~~~~~~~~~ 260 (393)
T cd08246 182 MLFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARAAGANPVAVVSSEEKAEYC-RALGAEGVINRRDFDHWGVLPDVNSE 260 (393)
T ss_pred HHhhcccccCCCCCEEEEECCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH-HHcCCCEEEcccccccccccccccch
Confidence 98654 45689999999997 9999999999999999999999988888888 67999998876321
Q ss_pred -------------HHHHHhc--C-CccEEEEcCCCchhHHHHHHhcccCcEEEEEcCC--CceeeChhhhhcCCeeeeee
Q 022313 236 -------------EQMKALG--K-SLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP--SKVKFSPASLNIGNAPLFRF 297 (299)
Q Consensus 236 -------------~~~~~~~--~-~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~--~~~~~~~~~l~~~~~~~~g~ 297 (299)
+.+.++. . ++|+++|++|+.. +..++++++++|+++.+|.. ....++...++.++.++.|.
T Consensus 261 ~~~~~~~~~~~~~~~v~~l~~~~~g~d~vid~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~l~~~~~~i~g~ 339 (393)
T cd08246 261 AYTAWTKEARRFGKAIWDILGGREDPDIVFEHPGRAT-FPTSVFVCDRGGMVVICAGTTGYNHTYDNRYLWMRQKRIQGS 339 (393)
T ss_pred hhhhhhhccchHHHHHHHHhCCCCCCeEEEECCchHh-HHHHHHHhccCCEEEEEcccCCCCCCCcHHHHhhheeEEEec
Confidence 1122332 3 7999999999854 89999999999999999876 34556777777888888764
No 51
>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins. Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an
Probab=100.00 E-value=2.8e-34 Score=257.59 Aligned_cols=277 Identities=40% Similarity=0.657 Sum_probs=233.5
Q ss_pred EEeeeCCCCcccceeeecCCCCCCcEEEEEceeecccchhhhhccCCCCCCCCccccccccEEEEEecCCCCCcccCCEE
Q 022313 12 GWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHV 91 (299)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~V 91 (299)
++.+.+..+.+++.+++.|.+.+++++|++.++++|++|.+.+.|.+....+|.++|||++|+|+.+|+++.+|++||+|
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~v~~~g~~~~~~~~Gd~V 81 (330)
T cd08245 2 AAVVHAAGGPLEPEEVPVPEPGPGEVLIKIEACGVCHTDLHAAEGDWGGSKYPLVPGHEIVGEVVEVGAGVEGRKVGDRV 81 (330)
T ss_pred eEEEecCCCCceEEeccCCCCCCCeEEEEEEEEeccHHHHHHHcCCCCCCCCCcccCccceEEEEEECCCCcccccCCEE
Confidence 34454454689999999999999999999999999999999888766444567789999999999999999999999999
Q ss_pred EEeccccCCCCCccccCCCCccccccccccccccCCCCccCCcceeeEEeecceEEEcCCCCCcccccccchhhHHHHHH
Q 022313 92 GVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTP 171 (299)
Q Consensus 92 ~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~a 171 (299)
++.+...+|+.|.+|.++.++.|.+..+. +....|+|++|+.++.+.++++|+++++.+++.+.+.+.++|++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~l~~~~~ta~~~ 154 (330)
T cd08245 82 GVGWLVGSCGRCEYCRRGLENLCQKAVNT-------GYTTQGGYAEYMVADAEYTVLLPDGLPLAQAAPLLCAGITVYSA 154 (330)
T ss_pred EEccccCCCCCChhhhCcCcccCcCcccc-------CcccCCccccEEEEcHHHeEECCCCCCHHHhhhhhhhHHHHHHH
Confidence 88776678999999999999999986542 11245899999999999999999999999999999999999999
Q ss_pred hhhccCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEEeCCCHHHHHHhcCCccEEEEc
Q 022313 172 MMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDT 251 (299)
Q Consensus 172 l~~~~~~~~g~~vlI~G~g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~v~d~ 251 (299)
+.. ..++++++|+|+|+|.+|++++++|+..|.+|+++++++++.+.+ +++|++.+++..+........+++|+++++
T Consensus 155 l~~-~~~~~~~~vlI~g~g~iG~~~~~~a~~~G~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~d~vi~~ 232 (330)
T cd08245 155 LRD-AGPRPGERVAVLGIGGLGHLAVQYARAMGFETVAITRSPDKRELA-RKLGADEVVDSGAELDEQAAAGGADVILVT 232 (330)
T ss_pred HHh-hCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHhCCcEEeccCCcchHHhccCCCCEEEEC
Confidence 876 456999999999988899999999999999999999999998888 678988888766543332234679999999
Q ss_pred CCCchhHHHHHHhcccCcEEEEEcCC--CceeeChhhhhcCCeeeeee
Q 022313 252 ASGDHPFDAYMSLLKVAGVYVLVGFP--SKVKFSPASLNIGNAPLFRF 297 (299)
Q Consensus 252 ~g~~~~~~~~~~~l~~~G~~v~~g~~--~~~~~~~~~l~~~~~~~~g~ 297 (299)
++.......++++++++|+++.+|.. ....++..+++.+++++.++
T Consensus 233 ~~~~~~~~~~~~~l~~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (330)
T cd08245 233 VVSGAAAEAALGGLRRGGRIVLVGLPESPPFSPDIFPLIMKRQSIAGS 280 (330)
T ss_pred CCcHHHHHHHHHhcccCCEEEEECCCCCCccccchHHHHhCCCEEEEe
Confidence 88766689999999999999999876 33333355677788887664
No 52
>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=100.00 E-value=4.2e-34 Score=257.59 Aligned_cols=270 Identities=32% Similarity=0.554 Sum_probs=231.8
Q ss_pred CCcccceeeecCCCCCCcEEEEEceeecccchhhhhccCCCC-CCCCccccccccEEEEEecCCCCCcccCCEEEEeccc
Q 022313 19 SGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGD-SKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYV 97 (299)
Q Consensus 19 ~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~D~~~~~g~~~~-~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~ 97 (299)
+..+++.+++.|.+.++|++||+.++++|++|...+.+.++. ...|.++|+|++|+|+++|+++..+++||+|...+..
T Consensus 11 ~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~ 90 (341)
T cd08297 11 EKPYEVKDVPVPEPGPGEVLVKLEASGVCHTDLHAALGDWPVKPKLPLIGGHEGAGVVVAVGPGVSGLKVGDRVGVKWLY 90 (341)
T ss_pred CCCceEEEeeCCCCCCCeEEEEEEEeecchhHHHHHcCCCCcCCCCCccCCcccceEEEEeCCCCCCCCCCCEEEEecCC
Confidence 357899999999999999999999999999999888776542 2346678999999999999999999999999887777
Q ss_pred cCCCCCccccCCCCccccccccccccccCCCCccCCcceeeEEeecceEEEcCCCCCcccccccchhhHHHHHHhhhccC
Q 022313 98 NSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKM 177 (299)
Q Consensus 98 ~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~al~~~~~ 177 (299)
.+|+.|++|..++..+|.+..+. |....|++++|+.++.+.++++|+++++.+++.++..+.|||+++... .
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~s~~~~~~~~~~~lp~~~~~~~~a~l~~~~~ta~~~~~~~-~ 162 (341)
T cd08297 91 DACGKCEYCRTGDETLCPNQKNS-------GYTVDGTFAEYAIADARYVTPIPDGLSFEQAAPLLCAGVTVYKALKKA-G 162 (341)
T ss_pred CCCCCCccccCCCcccCCCcccc-------ccccCCcceeEEEeccccEEECCCCCCHHHHHHHHcchHHHHHHHHhc-C
Confidence 89999999999999999875332 223468999999999999999999999999999999999999998775 5
Q ss_pred CCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEEeCCCHHH---HHHh--cCCccEEEEc
Q 022313 178 NQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQ---MKAL--GKSLDFIIDT 251 (299)
Q Consensus 178 ~~~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~---~~~~--~~~~d~v~d~ 251 (299)
++++++|||+|+ +.+|++++++|+..|++|+++++++++.+.+ +++|++++++..+.+. +.+. .+++|+++|+
T Consensus 163 ~~~~~~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~v~~~~~~~~~~~~~~~~~~~~vd~vl~~ 241 (341)
T cd08297 163 LKPGDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLELA-KELGADAFVDFKKSDDVEAVKELTGGGGAHAVVVT 241 (341)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHH-HHcCCcEEEcCCCccHHHHHHHHhcCCCCCEEEEc
Confidence 699999999998 6799999999999999999999999888888 6899999988776433 3333 3679999998
Q ss_pred CCCchhHHHHHHhcccCcEEEEEcCC--CceeeChhhhhcCCeeeeee
Q 022313 252 ASGDHPFDAYMSLLKVAGVYVLVGFP--SKVKFSPASLNIGNAPLFRF 297 (299)
Q Consensus 252 ~g~~~~~~~~~~~l~~~G~~v~~g~~--~~~~~~~~~l~~~~~~~~g~ 297 (299)
.++......++++++++|+++.+|.. ...+++...++.+++++.++
T Consensus 242 ~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~ 289 (341)
T cd08297 242 AVSAAAYEQALDYLRPGGTLVCVGLPPGGFIPLDPFDLVLRGITIVGS 289 (341)
T ss_pred CCchHHHHHHHHHhhcCCEEEEecCCCCCCCCCCHHHHHhcccEEEEe
Confidence 87766689999999999999999977 33467777777899998874
No 53
>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family. This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,
Probab=100.00 E-value=4.2e-34 Score=258.66 Aligned_cols=277 Identities=18% Similarity=0.297 Sum_probs=221.2
Q ss_pred eEEeeeCCCCcccceeeecCCCCCCcEEEEEceeecccchhhhhccCCCC---------CCCCccccccccEEEEEecCC
Q 022313 11 LGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGD---------SKYPLVPGHEIVGIVKEVGHN 81 (299)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~D~~~~~g~~~~---------~~~p~~lG~e~~G~V~~vG~~ 81 (299)
+++.+. .++.+++++.+.|++.++||+||++++++|++|++.+.|.... .+.|.++|||++|+|+++|++
T Consensus 2 ka~~~~-~~~~~~~~~~~~p~~~~~~v~V~v~a~~i~~~d~~~~~g~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~ 80 (350)
T cd08256 2 RAVVCH-GPQDYRLEEVPVPRPGPGEILVKVEACGICAGDIKCYHGAPSFWGDENQPPYVKPPMIPGHEFVGRVVELGEG 80 (350)
T ss_pred eeEEEe-cCCceEEEECCCCCCCCCeEEEEEEEEEEcccchhhhcCCCccccccccCccCCCCcccCcceeEEEEEeCCC
Confidence 355554 4567999999999999999999999999999999888775310 145778999999999999999
Q ss_pred CC--CcccCCEEEEeccccCCCCCccccCCCCccccccccccccccCCCCccCCcceeeEEeecc-eEEEcCCCCCcccc
Q 022313 82 VS--RFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHER-YCYKIANDYPLALA 158 (299)
Q Consensus 82 v~--~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~-~~~~~p~~~~~~~a 158 (299)
+. +|++||+|...+. .+|+.|.+|+.+.+++|.... +.|... ...|+|++|+.++++ .++++|++++++++
T Consensus 81 v~~~~~~~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~g~~~---~~~g~~~~~~~~~~~~~~~~lP~~~~~~~a 154 (350)
T cd08256 81 AEERGVKVGDRVISEQI-VPCWNCRFCNRGQYWMCQKHD--LYGFQN---NVNGGMAEYMRFPKEAIVHKVPDDIPPEDA 154 (350)
T ss_pred cccCCCCCCCEEEECCc-CCCCCChHHhCcCcccCcCcc--ceeecc---CCCCcceeeEEcccccceEECCCCCCHHHH
Confidence 98 8999999987655 489999999999999997532 222110 146899999999988 57899999999999
Q ss_pred cccchhhHHHHHHhhhccCCCCCCEEEEEcCChHHHHHHHHHHHCCCe-EEEEeCCchHHHHHHHhcCCCEEEeCCCHH-
Q 022313 159 APLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLN-VTVLSTSTSKKEEALSLLGADKFVVSSDLE- 236 (299)
Q Consensus 159 a~~~~~~~ta~~al~~~~~~~~g~~vlI~G~g~~G~~a~~~a~~~g~~-v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~- 236 (299)
+.+ .++.++|+++ ....++++++|+|.|+|++|++++++|+.+|++ ++++++++++.+.+ +++|++++++....+
T Consensus 155 a~~-~~~~ta~~a~-~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~-~~~g~~~v~~~~~~~~ 231 (350)
T cd08256 155 ILI-EPLACALHAV-DRANIKFDDVVVLAGAGPLGLGMIGAARLKNPKKLIVLDLKDERLALA-RKFGADVVLNPPEVDV 231 (350)
T ss_pred hhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCHHHHHHH-HHcCCcEEecCCCcCH
Confidence 888 8899999998 445569999999977899999999999999985 66677777776655 789999888776432
Q ss_pred --HHHHhc--CCccEEEEcCCCchhHHHHHHhcccCcEEEEEcCC-CceeeChhhh-hcCCeeeeee
Q 022313 237 --QMKALG--KSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP-SKVKFSPASL-NIGNAPLFRF 297 (299)
Q Consensus 237 --~~~~~~--~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~-~~~~~~~~~l-~~~~~~~~g~ 297 (299)
.+.++. .++|+++|++|+...+..++++++++|+++.+|.. ....+++..+ ..+++++.|+
T Consensus 232 ~~~~~~~~~~~~vdvvld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~ 298 (350)
T cd08256 232 VEKIKELTGGYGCDIYIEATGHPSAVEQGLNMIRKLGRFVEFSVFGDPVTVDWSIIGDRKELDVLGS 298 (350)
T ss_pred HHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEccCCCCCccChhHhhcccccEEEEe
Confidence 233332 46999999999765688899999999999999877 4444555444 3567777664
No 54
>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo
Probab=100.00 E-value=3e-34 Score=256.88 Aligned_cols=262 Identities=29% Similarity=0.430 Sum_probs=220.5
Q ss_pred CcccceeeecCCCCCCcEEEEEceeecccchhhhhccCCCCCCCCccccccccEEEEEecCCCCCcccCCEEEEeccccC
Q 022313 20 GVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNS 99 (299)
Q Consensus 20 ~~~~~~~~~~p~~~~~evlv~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~ 99 (299)
+.+++.+.+.|+++++||+||+.++++|++|++.+.+ .....+|.++|||++|+|+.+|+++..|++||+|...+.. +
T Consensus 12 ~~~~~~~~~~~~~~~~ev~v~v~~~~i~~~d~~~~~~-~~~~~~~~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~-~ 89 (325)
T cd08264 12 ENLKVEDVKDPKPGPGEVLIRVKMAGVNPVDYNVINA-VKVKPMPHIPGAEFAGVVEEVGDHVKGVKKGDRVVVYNRV-F 89 (325)
T ss_pred CceEEEeccCCCCCCCeEEEEEEEEEechHHHHHHhC-CCCCCCCeecccceeEEEEEECCCCCCCCCCCEEEECCCc-C
Confidence 5677888888889999999999999999999888764 2222357789999999999999999999999999877654 8
Q ss_pred CCCCccccCCCCccccccccccccccCCCCccCCcceeeEEeecceEEEcCCCCCcccccccchhhHHHHHHhhhccCCC
Q 022313 100 CRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQ 179 (299)
Q Consensus 100 c~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~al~~~~~~~ 179 (299)
|+.|.+|..+++++|.+..+. |....|+|++|+.++++.++++|+++++++++.+++++.++|+++.. ..++
T Consensus 90 ~~~c~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~-~~~~ 161 (325)
T cd08264 90 DGTCDMCLSGNEMLCRNGGII-------GVVSNGGYAEYIVVPEKNLFKIPDSISDELAASLPVAALTAYHALKT-AGLG 161 (325)
T ss_pred CCCChhhcCCCccccCcccee-------eccCCCceeeEEEcCHHHceeCCCCCCHHHhhhhhhhhHHHHHHHHh-cCCC
Confidence 999999999999999975432 22346899999999999999999999999999999999999999876 5669
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEEeCCCH-HHHHHhcCCccEEEEcCCCchh
Q 022313 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDL-EQMKALGKSLDFIIDTASGDHP 257 (299)
Q Consensus 180 ~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~-~~~~~~~~~~d~v~d~~g~~~~ 257 (299)
++++|+|+|+ |++|++++++|+..|++|+++++ .+.+ +++|++++++.++. +.+.++.+++|++++++|+. .
T Consensus 162 ~g~~vlI~g~~g~vg~~~~~~a~~~G~~v~~~~~----~~~~-~~~g~~~~~~~~~~~~~l~~~~~~~d~vl~~~g~~-~ 235 (325)
T cd08264 162 PGETVVVFGASGNTGIFAVQLAKMMGAEVIAVSR----KDWL-KEFGADEVVDYDEVEEKVKEITKMADVVINSLGSS-F 235 (325)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeH----HHHH-HHhCCCeeecchHHHHHHHHHhCCCCEEEECCCHH-H
Confidence 9999999998 99999999999999999888863 3555 67999888876642 22333347899999999985 4
Q ss_pred HHHHHHhcccCcEEEEEcCC--CceeeChhhhhcCCeeeeee
Q 022313 258 FDAYMSLLKVAGVYVLVGFP--SKVKFSPASLNIGNAPLFRF 297 (299)
Q Consensus 258 ~~~~~~~l~~~G~~v~~g~~--~~~~~~~~~l~~~~~~~~g~ 297 (299)
...++++++++|+++.+|.. ....+++..++.++.++.+.
T Consensus 236 ~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~ 277 (325)
T cd08264 236 WDLSLSVLGRGGRLVTFGTLTGGEVKLDLSDLYSKQISIIGS 277 (325)
T ss_pred HHHHHHhhccCCEEEEEecCCCCCCccCHHHHhhcCcEEEEc
Confidence 89999999999999999975 34677777888888888774
No 55
>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase. L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found
Probab=100.00 E-value=2.2e-34 Score=265.64 Aligned_cols=268 Identities=18% Similarity=0.296 Sum_probs=208.1
Q ss_pred ccceEEeeeCCCCcccceeeecCCCCCCcEEEEEceeecccchhhhh-ccCCC-C-----CCCCccccccccEEEEEecC
Q 022313 8 KDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWT-RNKHG-D-----SKYPLVPGHEIVGIVKEVGH 80 (299)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~D~~~~-~g~~~-~-----~~~p~~lG~e~~G~V~~vG~ 80 (299)
|+++++.+.+ ++.+++++++.|++.++||+|||+++++|++|++.+ .|... . ...|.++|||++|+|+++|+
T Consensus 1 m~~~a~~~~~-~~~l~~~e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~g~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~ 79 (410)
T cd08238 1 MKTKAWRMYG-KGDLRLEKFELPEIADDEILVRVISDSLCFSTWKLALQGSDHKKVPNDLAKEPVILGHEFAGTILKVGK 79 (410)
T ss_pred CCcEEEEEEc-CCceEEEecCCCCCCCCeEEEEEEEeccCCCCHHHHhcCCccccCcccccCCCceeccccEEEEEEeCC
Confidence 5677877754 557999999999999999999999999999999876 44321 1 23688999999999999999
Q ss_pred CCC-CcccCCEEEEeccccCCCCCccccCCCCccccccccccccccCCCCccCCcceeeEEeecc----eEEEcCCCCCc
Q 022313 81 NVS-RFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHER----YCYKIANDYPL 155 (299)
Q Consensus 81 ~v~-~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~----~~~~~p~~~~~ 155 (299)
+++ +|++||+|.+.+.. .|+.|.+|. .. |....|+|+||+.++++ .++++|+++++
T Consensus 80 ~v~~~~~vGdrV~~~~~~-~c~~~~~c~--------~~----------g~~~~G~~aey~~v~~~~~~~~~~~lP~~l~~ 140 (410)
T cd08238 80 KWQGKYKPGQRFVIQPAL-ILPDGPSCP--------GY----------SYTYPGGLATYHIIPNEVMEQDCLLIYEGDGY 140 (410)
T ss_pred CccCCCCCCCEEEEcCCc-CCCCCCCCC--------Cc----------cccCCCcceEEEEecHHhccCCeEECCCCCCH
Confidence 998 59999999876553 688887762 11 11246999999999987 68999999999
Q ss_pred cccccc-c--hhhHHHHHHhh--------hccCCCCCCEEEEEcC-ChHHHHHHHHHHHCCC---eEEEEeCCchHHHHH
Q 022313 156 ALAAPL-L--CAGITVYTPMM--------RHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGL---NVTVLSTSTSKKEEA 220 (299)
Q Consensus 156 ~~aa~~-~--~~~~ta~~al~--------~~~~~~~g~~vlI~G~-g~~G~~a~~~a~~~g~---~v~~~~~~~~~~~~~ 220 (299)
++++.+ + +. .++++++. ....++++++|+|+|+ |++|++++|+|+..|+ +|+++++++++++.+
T Consensus 141 ~~aal~epl~~~-~~~~~a~~~~~~~~~~~~~~~~~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a 219 (410)
T cd08238 141 AEASLVEPLSCV-IGAYTANYHLQPGEYRHRMGIKPGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARA 219 (410)
T ss_pred HHHhhcchHHHH-HHHhhhcccccccchhhhcCCCCCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHH
Confidence 988744 2 22 22344432 2345689999999985 9999999999999754 799999999999988
Q ss_pred HHhc--------CCC-EEEeCCC-H---HHHHHhc--CCccEEEEcCCCchhHHHHHHhcccCcEEEEEcCC--C--cee
Q 022313 221 LSLL--------GAD-KFVVSSD-L---EQMKALG--KSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP--S--KVK 281 (299)
Q Consensus 221 ~~~~--------g~~-~v~~~~~-~---~~~~~~~--~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~--~--~~~ 281 (299)
+++ |++ .++++.+ . +.+.++. .++|++||++|....+..++++++++|+++.++.. . ..+
T Consensus 220 -~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~v~~~t~g~g~D~vid~~g~~~~~~~a~~~l~~~G~~v~~~g~~~~~~~~~ 298 (410)
T cd08238 220 -QRLFPPEAASRGIELLYVNPATIDDLHATLMELTGGQGFDDVFVFVPVPELVEEADTLLAPDGCLNFFAGPVDKNFSAP 298 (410)
T ss_pred -HHhccccccccCceEEEECCCccccHHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhccCCeEEEEEccCCCCcccc
Confidence 465 655 4666543 2 2233443 47999999999877799999999999988877543 2 357
Q ss_pred eChhhhhcCCeeeeee
Q 022313 282 FSPASLNIGNAPLFRF 297 (299)
Q Consensus 282 ~~~~~l~~~~~~~~g~ 297 (299)
+++..++.|+++++|.
T Consensus 299 ~~~~~~~~~~~~i~g~ 314 (410)
T cd08238 299 LNFYNVHYNNTHYVGT 314 (410)
T ss_pred ccHHHhhhcCcEEEEe
Confidence 8888999999999985
No 56
>PRK05396 tdh L-threonine 3-dehydrogenase; Validated
Probab=100.00 E-value=3.9e-34 Score=257.93 Aligned_cols=276 Identities=23% Similarity=0.340 Sum_probs=223.6
Q ss_pred eEEeeeCCCCcccceeeecCCCCCCcEEEEEceeecccchhhhhccCC---CCCCCCccccccccEEEEEecCCCCCccc
Q 022313 11 LGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKH---GDSKYPLVPGHEIVGIVKEVGHNVSRFKV 87 (299)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~D~~~~~g~~---~~~~~p~~lG~e~~G~V~~vG~~v~~~~~ 87 (299)
+++.+.+.++.+++.+++.|++.++||+||++++++|++|++++.+.. .....|.++|||++|+|+++|+++..+++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~v~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~V~~vG~~v~~~~~ 81 (341)
T PRK05396 2 KALVKLKAEPGLWLTDVPVPEPGPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPVPMVVGHEFVGEVVEVGSEVTGFKV 81 (341)
T ss_pred ceEEEecCCCceEEEECCCCCCCCCeEEEEEEEEEEcccchHhhcCCCcccccCCCCcccceeeEEEEEEeCCCCCcCCC
Confidence 456665666779999999999999999999999999999998765532 12345778999999999999999999999
Q ss_pred CCEEEEeccccCCCCCccccCCCCccccccccccccccCCCCccCCcceeeEEeecceEEEcCCCCCcccccccchhhHH
Q 022313 88 GDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGIT 167 (299)
Q Consensus 88 Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~t 167 (299)
||+|...+. .+|+.|.+|..+.+++|....+. +....|+|++|+.++.+.++++|+++++.+++.+ ..+.+
T Consensus 82 Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~v~~~~~~~iP~~l~~~~~~~~-~~~~~ 152 (341)
T PRK05396 82 GDRVSGEGH-IVCGHCRNCRAGRRHLCRNTKGV-------GVNRPGAFAEYLVIPAFNVWKIPDDIPDDLAAIF-DPFGN 152 (341)
T ss_pred CCEEEECCC-CCCCCChhhhCcChhhCCCccee-------eecCCCcceeeEEechHHeEECcCCCCHHHhHhh-hHHHH
Confidence 999987655 48999999999999999865322 2234689999999999999999999999887744 45555
Q ss_pred HHHHhhhccCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCchHHHHHHHhcCCCEEEeCCCHHH---HHHhc-
Q 022313 168 VYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKFVVSSDLEQ---MKALG- 242 (299)
Q Consensus 168 a~~al~~~~~~~~g~~vlI~G~g~~G~~a~~~a~~~g~-~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~---~~~~~- 242 (299)
+++++.. . ..++++|+|.|+|++|++++|+|+..|+ +++++++++++.+.+ +++|++++++.++.+. +.++.
T Consensus 153 ~~~~~~~-~-~~~g~~vlV~~~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~-~~lg~~~~~~~~~~~~~~~~~~~~~ 229 (341)
T PRK05396 153 AVHTALS-F-DLVGEDVLITGAGPIGIMAAAVAKHVGARHVVITDVNEYRLELA-RKMGATRAVNVAKEDLRDVMAELGM 229 (341)
T ss_pred HHHHHHc-C-CCCCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH-HHhCCcEEecCccccHHHHHHHhcC
Confidence 5555432 2 3689999998889999999999999999 688887777777666 7899999987765332 33332
Q ss_pred -CCccEEEEcCCCchhHHHHHHhcccCcEEEEEcCC-CceeeChhhhhcCCeeeeeec
Q 022313 243 -KSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP-SKVKFSPASLNIGNAPLFRFK 298 (299)
Q Consensus 243 -~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~-~~~~~~~~~l~~~~~~~~g~~ 298 (299)
+++|++|||.|+......++++++++|+++.+|.. ...++++..+..+++++.+|.
T Consensus 230 ~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~l~~~~ 287 (341)
T PRK05396 230 TEGFDVGLEMSGAPSAFRQMLDNMNHGGRIAMLGIPPGDMAIDWNKVIFKGLTIKGIY 287 (341)
T ss_pred CCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCCcccHHHHhhcceEEEEEE
Confidence 68999999999877789999999999999999977 445556677888999988863
No 57
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=100.00 E-value=1e-33 Score=253.63 Aligned_cols=275 Identities=30% Similarity=0.474 Sum_probs=228.9
Q ss_pred eEEeeeCCCCcccceeeecCCCCCCcEEEEEceeecccchhhhhccCCCCCCCCccccccccEEEEEecCCCCCcccCCE
Q 022313 11 LGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDH 90 (299)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~ 90 (299)
+++.+...++.+.+++.+.|++.++||+|+++++++|++|++.+.|.++....|.++|||++|+|+++|+++..+++||+
T Consensus 2 ~a~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~ 81 (332)
T cd08259 2 KAAILHKPNKPLQIEEVPDPEPGPGEVLIKVKAAGVCYRDLLFWKGFFPRGKYPLILGHEIVGTVEEVGEGVERFKPGDR 81 (332)
T ss_pred eEEEEecCCCceEEEEccCCCCCCCeEEEEEEEEecchhhhHHhcCCCCCCCCCeeccccceEEEEEECCCCccCCCCCE
Confidence 35555444677888999999999999999999999999999998887655556789999999999999999999999999
Q ss_pred EEEeccccCCCCCccccCCCCccccccccccccccCCCCccCCcceeeEEeecceEEEcCCCCCcccccccchhhHHHHH
Q 022313 91 VGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYT 170 (299)
Q Consensus 91 V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~ 170 (299)
|+..... .|+.|.+|..+.+++|.+. ... |....|+|++|+.++.+.++++|+++++++++.+++++.++|+
T Consensus 82 V~~~~~~-~~~~~~~~~~~~~~~~~~~--~~~-----~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~ 153 (332)
T cd08259 82 VILYYYI-PCGKCEYCLSGEENLCRNR--AEY-----GEEVDGGFAEYVKVPERSLVKLPDNVSDESAALAACVVGTAVH 153 (332)
T ss_pred EEECCCC-CCcCChhhhCCCcccCCCc--ccc-----ccccCCeeeeEEEechhheEECCCCCCHHHHhhhccHHHHHHH
Confidence 9876543 7999999999999999875 222 2345699999999999999999999999999999999999999
Q ss_pred HhhhccCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEEeCCC-HHHHHHhcCCccEE
Q 022313 171 PMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSD-LEQMKALGKSLDFI 248 (299)
Q Consensus 171 al~~~~~~~~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~-~~~~~~~~~~~d~v 248 (299)
+++. ..+.++++++|+|+ |.+|++++++++..|++++++++++++.+.+ ++++.+.+++..+ .+.+.+. .++|++
T Consensus 154 ~l~~-~~~~~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~d~v 230 (332)
T cd08259 154 ALKR-AGVKKGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKIL-KELGADYVIDGSKFSEDVKKL-GGADVV 230 (332)
T ss_pred HHHH-hCCCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH-HHcCCcEEEecHHHHHHHHhc-cCCCEE
Confidence 9987 56699999999997 9999999999999999999999988888777 6788888776553 1222222 379999
Q ss_pred EEcCCCchhHHHHHHhcccCcEEEEEcCC--CceeeChhhhhcCCeeeeee
Q 022313 249 IDTASGDHPFDAYMSLLKVAGVYVLVGFP--SKVKFSPASLNIGNAPLFRF 297 (299)
Q Consensus 249 ~d~~g~~~~~~~~~~~l~~~G~~v~~g~~--~~~~~~~~~l~~~~~~~~g~ 297 (299)
++++|... ...++++++++|+++.+|.. ....++......+++++.++
T Consensus 231 ~~~~g~~~-~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~ 280 (332)
T cd08259 231 IELVGSPT-IEESLRSLNKGGRLVLIGNVTPDPAPLRPGLLILKEIRIIGS 280 (332)
T ss_pred EECCChHH-HHHHHHHhhcCCEEEEEcCCCCCCcCCCHHHHHhCCcEEEEe
Confidence 99999876 88999999999999999876 22223444455677776654
No 58
>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi
Probab=100.00 E-value=4.9e-34 Score=261.29 Aligned_cols=268 Identities=24% Similarity=0.411 Sum_probs=219.4
Q ss_pred CcccceeeecCCCCCCcEEEEEceeecccchhhhhccCC------C-CCCCCccccccccEEEEEecCCCCCcccCCEEE
Q 022313 20 GVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKH------G-DSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVG 92 (299)
Q Consensus 20 ~~~~~~~~~~p~~~~~evlv~v~~~~i~~~D~~~~~g~~------~-~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~V~ 92 (299)
..+++++++.|+++++||+||++++++|++|++.+.+.. + ....|.++|||++|+|+++|+++.+|++||+|.
T Consensus 37 ~~~~~~~~~~p~~~~~ev~V~v~a~gi~~~D~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~ 116 (384)
T cd08265 37 PELRVEDVPVPNLKPDEILIRVKACGICGSDIHLYETDKDGYILYPGLTEFPVVIGHEFSGVVEKTGKNVKNFEKGDPVT 116 (384)
T ss_pred CCEEEEECCCCCCCCCEEEEEEEEEEEcHhHHHHHcCCCCcccccCcccCCCcccccceEEEEEEECCCCCCCCCCCEEE
Confidence 359999999999999999999999999999998776321 1 134578999999999999999999999999998
Q ss_pred EeccccCCCCCccccCCCCccccccccccccccCCCCccCCcceeeEEeecceEEEcCCCC-------Ccccccccchhh
Q 022313 93 VGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDY-------PLALAAPLLCAG 165 (299)
Q Consensus 93 ~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~-------~~~~aa~~~~~~ 165 (299)
+.+. .+|+.|..|..+++.+|....+ . |....|+|++|+.++++.++++|+++ +.. ++.+..++
T Consensus 117 ~~~~-~~~~~~~~c~~~~~~~~~~~~~--~-----g~~~~g~~~~~v~v~~~~~~~lP~~~~~~~~~~~~~-~a~~~~~~ 187 (384)
T cd08265 117 AEEM-MWCGMCRACRSGSPNHCKNLKE--L-----GFSADGAFAEYIAVNARYAWEINELREIYSEDKAFE-AGALVEPT 187 (384)
T ss_pred ECCC-CCCCCChhhhCcCcccCCCcce--e-----eecCCCcceeeEEechHHeEECCccccccccCCCHH-HhhhhhHH
Confidence 8766 4999999999999999986432 1 11236899999999999999999863 344 56677788
Q ss_pred HHHHHHhhhc-cCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCchHHHHHHHhcCCCEEEeCCCH------HH
Q 022313 166 ITVYTPMMRH-KMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKFVVSSDL------EQ 237 (299)
Q Consensus 166 ~ta~~al~~~-~~~~~g~~vlI~G~g~~G~~a~~~a~~~g~-~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~------~~ 237 (299)
.++|+++... ..++++++|+|+|+|++|++++++|+..|+ +|+++++++++.+.+ +++|++++++.++. +.
T Consensus 188 ~ta~~al~~~~~~~~~g~~VlV~g~g~vG~~ai~lA~~~G~~~vi~~~~~~~~~~~~-~~~g~~~~v~~~~~~~~~~~~~ 266 (384)
T cd08265 188 SVAYNGLFIRGGGFRPGAYVVVYGAGPIGLAAIALAKAAGASKVIAFEISEERRNLA-KEMGADYVFNPTKMRDCLSGEK 266 (384)
T ss_pred HHHHHHHHhhcCCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH-HHcCCCEEEcccccccccHHHH
Confidence 9999998655 567999999999889999999999999999 799988888766555 78999998876632 22
Q ss_pred HHHhc--CCccEEEEcCCCc-hhHHHHHHhcccCcEEEEEcCC-CceeeChhhhhcCCeeeeee
Q 022313 238 MKALG--KSLDFIIDTASGD-HPFDAYMSLLKVAGVYVLVGFP-SKVKFSPASLNIGNAPLFRF 297 (299)
Q Consensus 238 ~~~~~--~~~d~v~d~~g~~-~~~~~~~~~l~~~G~~v~~g~~-~~~~~~~~~l~~~~~~~~g~ 297 (299)
+.++. +++|+|+|+.|+. ..+..++++++++|+++.+|.. ...++++..+..+..++.|.
T Consensus 267 v~~~~~g~gvDvvld~~g~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~l~~~ 330 (384)
T cd08265 267 VMEVTKGWGADIQVEAAGAPPATIPQMEKSIAINGKIVYIGRAATTVPLHLEVLQVRRAQIVGA 330 (384)
T ss_pred HHHhcCCCCCCEEEECCCCcHHHHHHHHHHHHcCCEEEEECCCCCCCcccHHHHhhCceEEEEe
Confidence 33332 5799999999974 3578899999999999999977 55566667777888888765
No 59
>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members. This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio
Probab=100.00 E-value=8.5e-34 Score=254.89 Aligned_cols=278 Identities=32% Similarity=0.443 Sum_probs=234.2
Q ss_pred eEEeeeCCCCc-ccceeeecCCCCCCcEEEEEceeecccchhhhhccCCC-CCCCCccccccccEEEEEecCCCCCcccC
Q 022313 11 LGWAARDPSGV-LSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG-DSKYPLVPGHEIVGIVKEVGHNVSRFKVG 88 (299)
Q Consensus 11 ~~~~~~~~~~~-~~~~~~~~p~~~~~evlv~v~~~~i~~~D~~~~~g~~~-~~~~p~~lG~e~~G~V~~vG~~v~~~~~G 88 (299)
+++.+....+. +...+.+.|.+.+++|+|++.++++|+.|...+.|.+. ....|.++|+|++|+|+.+|+++..+++|
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~g~~~~G~v~~~G~~v~~~~~G 81 (338)
T cd08254 2 KAWRFHKGSKGLLVLEEVPVPEPGPGEVLVKVKAAGVCHSDLHILDGGVPTLTKLPLTLGHEIAGTVVEVGAGVTNFKVG 81 (338)
T ss_pred eeEEEecCCCCceEEeccCCCCCCCCeEEEEEEEEeeccHhHHHHcCCCcccCCCCEeccccccEEEEEECCCCccCCCC
Confidence 34444444444 67788899999999999999999999999998887664 33457789999999999999999999999
Q ss_pred CEEEEeccccCCCCCccccCCCCccccccccccccccCCCCccCCcceeeEEeecceEEEcCCCCCcccccccchhhHHH
Q 022313 89 DHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITV 168 (299)
Q Consensus 89 d~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta 168 (299)
|+|...+. .+|+.|..|..+....|....+. |....|+|++|+.++.+.++++|+++++.+++.++..+.++
T Consensus 82 d~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~ta 153 (338)
T cd08254 82 DRVAVPAV-IPCGACALCRRGRGNLCLNQGMP-------GLGIDGGFAEYIVVPARALVPVPDGVPFAQAAVATDAVLTP 153 (338)
T ss_pred CEEEECCC-CCCCCChhhhCcCcccCCCCCcc-------ccccCCcceeeEEechHHeEECCCCCCHHHhhhhcchHHHH
Confidence 99987665 48999999999999988654322 33456999999999999999999999999999999999999
Q ss_pred HHHhhhccCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEEeCCCHHH---HHHh-cCC
Q 022313 169 YTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQ---MKAL-GKS 244 (299)
Q Consensus 169 ~~al~~~~~~~~g~~vlI~G~g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~---~~~~-~~~ 244 (299)
|+++.....++++++|||.|+|.+|++++++|+..|++|+++++++++.+.+ +++|.+++++..+... +... .++
T Consensus 154 ~~~l~~~~~~~~~~~vli~g~g~vG~~~~~la~~~G~~V~~~~~s~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~ 232 (338)
T cd08254 154 YHAVVRAGEVKPGETVLVIGLGGLGLNAVQIAKAMGAAVIAVDIKEEKLELA-KELGADEVLNSLDDSPKDKKAAGLGGG 232 (338)
T ss_pred HHHHHhccCCCCCCEEEEECCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHhCCCEEEcCCCcCHHHHHHHhcCCC
Confidence 9999888778999999998889999999999999999999999999888888 6899988887664322 2112 367
Q ss_pred ccEEEEcCCCchhHHHHHHhcccCcEEEEEcCC-CceeeChhhhhcCCeeeeee
Q 022313 245 LDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP-SKVKFSPASLNIGNAPLFRF 297 (299)
Q Consensus 245 ~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~-~~~~~~~~~l~~~~~~~~g~ 297 (299)
+|+++|+++.....+.++++++++|+++.+|.. ....++...++.++.+++|+
T Consensus 233 ~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~ 286 (338)
T cd08254 233 FDVIFDFVGTQPTFEDAQKAVKPGGRIVVVGLGRDKLTVDLSDLIARELRIIGS 286 (338)
T ss_pred ceEEEECCCCHHHHHHHHHHhhcCCEEEEECCCCCCCccCHHHHhhCccEEEEe
Confidence 999999999776789999999999999999987 55667778888888888864
No 60
>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=100.00 E-value=9.9e-34 Score=253.92 Aligned_cols=262 Identities=36% Similarity=0.566 Sum_probs=222.6
Q ss_pred cccceeeecCCCCCCcEEEEEceeecccchhhhhccCCCCCCCCccccccccEEEEEecCCCCCcccCCEEEEeccccCC
Q 022313 21 VLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSC 100 (299)
Q Consensus 21 ~~~~~~~~~p~~~~~evlv~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~c 100 (299)
.+++.+.+.|.+.++||+||+.++++|++|++.+.|.++....|.++|||++|+|+++|+++.++++||+|.+.+...+|
T Consensus 16 ~~~~~~~~~~~~~~~ev~irv~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~ 95 (329)
T cd08298 16 PLRLTEVPVPEPGPGEVLIKVEACGVCRTDLHIVEGDLPPPKLPLIPGHEIVGRVEAVGPGVTRFSVGDRVGVPWLGSTC 95 (329)
T ss_pred CceEEeccCCCCCCCEEEEEEEEEeccHHHHHHHhCCCCCCCCCccccccccEEEEEECCCCCCCcCCCEEEEeccCCCC
Confidence 67788888888999999999999999999999888876545568899999999999999999999999999887777899
Q ss_pred CCCccccCCCCccccccccccccccCCCCccCCcceeeEEeecceEEEcCCCCCcccccccchhhHHHHHHhhhccCCCC
Q 022313 101 RDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQP 180 (299)
Q Consensus 101 ~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~al~~~~~~~~ 180 (299)
+.|.+|..+.+++|+...+. |....|+|++|+.++.+.++++|+++++.+++.+++++.++|+++ ....+++
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~~-~~~~~~~ 167 (329)
T cd08298 96 GECRYCRSGRENLCDNARFT-------GYTVDGGYAEYMVADERFAYPIPEDYDDEEAAPLLCAGIIGYRAL-KLAGLKP 167 (329)
T ss_pred CCChhHhCcChhhCCCcccc-------ccccCCceEEEEEecchhEEECCCCCCHHHhhHhhhhhHHHHHHH-HhhCCCC
Confidence 99999999999999876543 222358999999999999999999999999999999999999998 5666799
Q ss_pred CCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEEeCCCHHHHHHhcCCccEEEEcCCCchhHHH
Q 022313 181 GKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHPFDA 260 (299)
Q Consensus 181 g~~vlI~G~g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~ 260 (299)
+++++|+|+|++|++++++++..|++|+++++++++.+.+ +++|++.+++.+.. ..+++|+++++.+.....+.
T Consensus 168 ~~~vlV~g~g~vg~~~~~la~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~-----~~~~vD~vi~~~~~~~~~~~ 241 (329)
T cd08298 168 GQRLGLYGFGASAHLALQIARYQGAEVFAFTRSGEHQELA-RELGADWAGDSDDL-----PPEPLDAAIIFAPVGALVPA 241 (329)
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCeEEEEcCChHHHHHH-HHhCCcEEeccCcc-----CCCcccEEEEcCCcHHHHHH
Confidence 9999999999999999999999999999999999888888 78999888766532 23579999998776667999
Q ss_pred HHHhcccCcEEEEEcCC-C-ceeeChhhhhcCCeeeeee
Q 022313 261 YMSLLKVAGVYVLVGFP-S-KVKFSPASLNIGNAPLFRF 297 (299)
Q Consensus 261 ~~~~l~~~G~~v~~g~~-~-~~~~~~~~l~~~~~~~~g~ 297 (299)
++++++++|+++.+|.. . ...+++.. +.++..+.++
T Consensus 242 ~~~~l~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~i~~~ 279 (329)
T cd08298 242 ALRAVKKGGRVVLAGIHMSDIPAFDYEL-LWGEKTIRSV 279 (329)
T ss_pred HHHHhhcCCEEEEEcCCCCCCCccchhh-hhCceEEEEe
Confidence 99999999999998865 2 22334333 3456666543
No 61
>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu
Probab=100.00 E-value=1.4e-33 Score=256.89 Aligned_cols=284 Identities=26% Similarity=0.445 Sum_probs=233.9
Q ss_pred eEEeeeCCCCcccceeeecCCCCCCcEEEEEceeecccchhhhhccCCCCCCCCccccccccEEEEEecCCCCC---ccc
Q 022313 11 LGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSR---FKV 87 (299)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~---~~~ 87 (299)
+++.+......+++.+.+.|.+.++||+||+.++++|++|+..+.+.++. .+|.++|||++|+|+.+|+++.+ |++
T Consensus 2 ~a~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~-~~p~~~g~e~~G~v~~vG~~~~~~~~~~~ 80 (367)
T cd08263 2 KAAVLKGPNPPLTIEEIPVPRPKEGEILIRVAACGVCHSDLHVLKGELPF-PPPFVLGHEISGEVVEVGPNVENPYGLSV 80 (367)
T ss_pred eeEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEeeeCcchHHHhcCCCCC-CCCcccccccceEEEEeCCCCCCCCcCCC
Confidence 35666444456888999999999999999999999999999988876653 56789999999999999999988 999
Q ss_pred CCEEEEeccccCCCCCccccCCCCcccccccc-c-cccccCCC-------------CccCCcceeeEEeecceEEEcCCC
Q 022313 88 GDHVGVGTYVNSCRDCEYCNDGLEVHCARSVY-T-FNAIDADG-------------TITKGGYSSYIVVHERYCYKIAND 152 (299)
Q Consensus 88 Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~-~-~~~~~~~g-------------~~~~g~~~~~~~~~~~~~~~~p~~ 152 (299)
||+|...+ ..+|+.|.+|..+++++|.+..+ . ..+.+++| ....|++++|+.++.+.++++|++
T Consensus 81 Gd~V~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~ 159 (367)
T cd08263 81 GDRVVGSF-IMPCGKCRYCARGKENLCEDFFAYNRLKGTLYDGTTRLFRLDGGPVYMYSMGGLAEYAVVPATALAPLPES 159 (367)
T ss_pred CCEEEEcC-CCCCCCChHHhCcCcccCcCccccccccccccCCcccccccCCCccccccCCcceeEEEechhhEEECCCC
Confidence 99997643 34899999999999999998641 1 11111111 023689999999999999999999
Q ss_pred CCcccccccchhhHHHHHHhhhccCCCCCCEEEEEcCChHHHHHHHHHHHCCCe-EEEEeCCchHHHHHHHhcCCCEEEe
Q 022313 153 YPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLN-VTVLSTSTSKKEEALSLLGADKFVV 231 (299)
Q Consensus 153 ~~~~~aa~~~~~~~ta~~al~~~~~~~~g~~vlI~G~g~~G~~a~~~a~~~g~~-v~~~~~~~~~~~~~~~~~g~~~v~~ 231 (299)
+++.+++.++.++.|+|+++.....+.++++|||+|+|.+|++++++|+..|++ +++++.++++.+.+ +++|++++++
T Consensus 160 is~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~g~g~vG~~~~~lak~~G~~~vi~~~~s~~~~~~~-~~~g~~~v~~ 238 (367)
T cd08263 160 LDYTESAVLGCAGFTAYGALKHAADVRPGETVAVIGVGGVGSSAIQLAKAFGASPIIAVDVRDEKLAKA-KELGATHTVN 238 (367)
T ss_pred CCHHHHhHhcchHHHHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH-HHhCCceEec
Confidence 999999999999999999998777778999999998899999999999999997 88888888888777 6899999998
Q ss_pred CCCHHH---HHHh--cCCccEEEEcCCCchhHHHHHHhcccCcEEEEEcCC---CceeeChhhhhcCCeeeeee
Q 022313 232 SSDLEQ---MKAL--GKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP---SKVKFSPASLNIGNAPLFRF 297 (299)
Q Consensus 232 ~~~~~~---~~~~--~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~---~~~~~~~~~l~~~~~~~~g~ 297 (299)
.+.... +... ..++|+++|++++......++++++++|+++.+|.. ....+++..++.+++++.++
T Consensus 239 ~~~~~~~~~l~~~~~~~~~d~vld~vg~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (367)
T cd08263 239 AAKEDAVAAIREITGGRGVDVVVEALGKPETFKLALDVVRDGGRAVVVGLAPGGATAEIPITRLVRRGIKIIGS 312 (367)
T ss_pred CCcccHHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHhcCCEEEEEccCCCCCccccCHHHHhhCCeEEEec
Confidence 765433 2222 367999999999873488999999999999999876 24556767766788888764
No 62
>TIGR01751 crot-CoA-red crotonyl-CoA reductase. The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.
Probab=100.00 E-value=1.2e-33 Score=259.98 Aligned_cols=285 Identities=19% Similarity=0.259 Sum_probs=228.5
Q ss_pred ccccccceEEee--eCC-CCcccceeeecCCCCCCcEEEEEceeecccchhhhhccCCC----------CCCCC-ccccc
Q 022313 4 ETASKDCLGWAA--RDP-SGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG----------DSKYP-LVPGH 69 (299)
Q Consensus 4 ~~~~~~~~~~~~--~~~-~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~D~~~~~g~~~----------~~~~p-~~lG~ 69 (299)
+..+||+..+.. .+. ++.+++.+++.|.++++|++||+.++++|++|.+...+... ....| .++||
T Consensus 4 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~p~l~~~evlV~v~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~G~ 83 (398)
T TIGR01751 4 VPETMYAFAIREERDGDPRQAIQLEVVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAFLRKYGRDDLPFHIIGS 83 (398)
T ss_pred cchhhhheEEecccCCCcccceEEeecCCCCCCCCeEEEEEEEEecCchhhhhhcCCccchhhhhcccCCCCCCceeccc
Confidence 445566666643 333 35688999999999999999999999999999876654321 01223 27999
Q ss_pred cccEEEEEecCCCCCcccCCEEEEeccccCCCCCccccCCCCccccccccccccccCCCCccCCcceeeEEeecceEEEc
Q 022313 70 EIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKI 149 (299)
Q Consensus 70 e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~ 149 (299)
|++|+|+++|+++..+++||+|++.+. .+|++|.+|+.+++..|....+ .|.. ...|+|++|+.++.+.++++
T Consensus 84 e~~G~V~~vG~~v~~~~~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~g~~----~~~g~~ae~~~v~~~~~~~v 156 (398)
T TIGR01751 84 DASGVVWRVGPGVTRWKVGDEVVASCL-QVDLTAPDGRVGDPMLSSEQRI--WGYE----TNFGSFAEFALVKDYQLMPK 156 (398)
T ss_pred ceEEEEEEeCCCCCCCCCCCEEEEccc-cccCCchhhccCcccccccccc--cccc----CCCccceEEEEechHHeEEC
Confidence 999999999999999999999987655 4899999999999999975432 1111 23689999999999999999
Q ss_pred CCCCCcccccccchhhHHHHHHhhh--ccCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCC
Q 022313 150 ANDYPLALAAPLLCAGITVYTPMMR--HKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGA 226 (299)
Q Consensus 150 p~~~~~~~aa~~~~~~~ta~~al~~--~~~~~~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~ 226 (299)
|+++++++++.+.+++.++|+++.. ...++++++|+|+|+ |.+|++++++|+..|++++++++++++.+.+ +++|+
T Consensus 157 P~~l~~~~aa~~~~~~~ta~~al~~~~~~~~~~g~~vlV~Ga~g~vG~~ai~~ak~~G~~vi~~~~~~~~~~~~-~~~g~ 235 (398)
T TIGR01751 157 PKHLTWEEAACPGLTGATAYRQLVGWNPATVKPGDNVLIWGAAGGLGSYATQLARAGGGNPVAVVSSPEKAEYC-RELGA 235 (398)
T ss_pred CCCCCHHHHhhccchHHHHHHHHhhhhccCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCeEEEEcCCHHHHHHH-HHcCC
Confidence 9999999999999999999999865 355689999999998 9999999999999999999988888888877 57999
Q ss_pred CEEEeCCCHH-------------------------HHHHh--cCCccEEEEcCCCchhHHHHHHhcccCcEEEEEcCC--
Q 022313 227 DKFVVSSDLE-------------------------QMKAL--GKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP-- 277 (299)
Q Consensus 227 ~~v~~~~~~~-------------------------~~~~~--~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~-- 277 (299)
+.+++.++.. .+.++ .+++|++|||+|+.. +..++++++++|+++.+|..
T Consensus 236 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~vld~~g~~~-~~~~~~~l~~~G~~v~~g~~~~ 314 (398)
T TIGR01751 236 EAVIDRNDFGHWGRLPDLNTQAPKEWTKSFKRFGKRIRELTGGEDPDIVFEHPGRAT-FPTSVFVCRRGGMVVICGGTTG 314 (398)
T ss_pred CEEecCCCcchhhccccccccccchhhhcchhHHHHHHHHcCCCCceEEEECCcHHH-HHHHHHhhccCCEEEEEccccC
Confidence 9999865321 11122 257999999999754 88999999999999999987
Q ss_pred CceeeChhhhhcCCeeeeee
Q 022313 278 SKVKFSPASLNIGNAPLFRF 297 (299)
Q Consensus 278 ~~~~~~~~~l~~~~~~~~g~ 297 (299)
....++...++.++.++.+.
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~ 334 (398)
T TIGR01751 315 YNHDYDNRYLWMRQKRIQGS 334 (398)
T ss_pred CCCCcCHHHHhhcccEEEcc
Confidence 33566677777777777664
No 63
>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin
Probab=100.00 E-value=6e-34 Score=254.98 Aligned_cols=241 Identities=20% Similarity=0.252 Sum_probs=200.0
Q ss_pred CcccceeeecCCCCCCcEEEEEceeecccchhhhhccCCCC-CCCCccccccccEEEEEecCCCCC-cccCCEEEEeccc
Q 022313 20 GVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGD-SKYPLVPGHEIVGIVKEVGHNVSR-FKVGDHVGVGTYV 97 (299)
Q Consensus 20 ~~~~~~~~~~p~~~~~evlv~v~~~~i~~~D~~~~~g~~~~-~~~p~~lG~e~~G~V~~vG~~v~~-~~~Gd~V~~~~~~ 97 (299)
+.+++.+++.|.+.++||+||++++++|++|++.+.|.++. ...|.++|||++|+|+++|+++.+ |++||+|...+
T Consensus 16 ~~~~~~~~~~p~~~~~evlv~v~~~gi~~~d~~~~~g~~~~~~~~p~v~G~e~~G~V~~vG~~v~~~~~vGd~V~~~~-- 93 (324)
T cd08291 16 KELSLPEPEVPEPGPGEVLIKVEAAPINPSDLGFLKGQYGSTKALPVPPGFEGSGTVVAAGGGPLAQSLIGKRVAFLA-- 93 (324)
T ss_pred cEEEecccCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCcCCCcceEEEEEEECCCccccCCCCCEEEecC--
Confidence 36788899999999999999999999999999988886542 356889999999999999999986 99999996411
Q ss_pred cCCCCCccccCCCCccccccccccccccCCCCccCCcceeeEEeecceEEEcCCCCCcccccccchhhHHHHHHhhhccC
Q 022313 98 NSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKM 177 (299)
Q Consensus 98 ~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~al~~~~~ 177 (299)
...|+|++|+.+|++.++++|+++++++++++++.+.|+|.++.. ..
T Consensus 94 --------------------------------~~~g~~a~~~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~~~-~~ 140 (324)
T cd08291 94 --------------------------------GSYGTYAEYAVADAQQCLPLPDGVSFEQGASSFVNPLTALGMLET-AR 140 (324)
T ss_pred --------------------------------CCCCcchheeeecHHHeEECCCCCCHHHHhhhcccHHHHHHHHHh-hc
Confidence 013899999999999999999999999999888888999865543 33
Q ss_pred CCCCCEEEEE--cCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEEeCCCHHH---HHHhc--CCccEEEE
Q 022313 178 NQPGKSLGVI--GLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQ---MKALG--KSLDFIID 250 (299)
Q Consensus 178 ~~~g~~vlI~--G~g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~---~~~~~--~~~d~v~d 250 (299)
.++++++|+ |+|++|++++|+|+..|++|+++++++++.+.+ +++|++++++.++.+. +.+.. +++|++||
T Consensus 141 -~~~~~vlv~~~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~~~-~~~g~~~~i~~~~~~~~~~v~~~~~~~~~d~vid 218 (324)
T cd08291 141 -EEGAKAVVHTAAASALGRMLVRLCKADGIKVINIVRRKEQVDLL-KKIGAEYVLNSSDPDFLEDLKELIAKLNATIFFD 218 (324)
T ss_pred -cCCCcEEEEccCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCCcEEEECCCccHHHHHHHHhCCCCCcEEEE
Confidence 355566665 459999999999999999999999999888888 6899999998776433 33332 57999999
Q ss_pred cCCCchhHHHHHHhcccCcEEEEEcCC--Cce-eeChhhhhcCCeeeeeec
Q 022313 251 TASGDHPFDAYMSLLKVAGVYVLVGFP--SKV-KFSPASLNIGNAPLFRFK 298 (299)
Q Consensus 251 ~~g~~~~~~~~~~~l~~~G~~v~~g~~--~~~-~~~~~~l~~~~~~~~g~~ 298 (299)
++|+.. ....+++++++|+++.+|.. ... .++...++.|++++.|+.
T Consensus 219 ~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (324)
T cd08291 219 AVGGGL-TGQILLAMPYGSTLYVYGYLSGKLDEPIDPVDLIFKNKSIEGFW 268 (324)
T ss_pred CCCcHH-HHHHHHhhCCCCEEEEEEecCCCCcccCCHHHHhhcCcEEEEEE
Confidence 999876 78889999999999999976 222 366778888999998863
No 64
>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta
Probab=100.00 E-value=2.3e-33 Score=250.53 Aligned_cols=266 Identities=20% Similarity=0.293 Sum_probs=220.4
Q ss_pred eEEeeeCCCCcccceeeecCCCCCCcEEEEEceeecccchhhhhccCCCCCCCCccccccccEEEEEecCCCCCcccCCE
Q 022313 11 LGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDH 90 (299)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~ 90 (299)
+++.+. .++.+++++++.|+++++||+||++++++|++|...+.|.++ .|.++|||++|+|+++|++ +++||+
T Consensus 2 ~a~~~~-~~~~~~~~~~~~p~~~~~~vlV~v~a~~i~~~d~~~~~g~~~---~~~~~G~e~~G~Vv~~G~~---~~~G~~ 74 (319)
T cd08242 2 KALVLD-GGLDLRVEDLPKPEPPPGEALVRVLLAGICNTDLEIYKGYYP---FPGVPGHEFVGIVEEGPEA---ELVGKR 74 (319)
T ss_pred eeEEEe-CCCcEEEEECCCCCCCCCeEEEEEEEEEEccccHHHHcCCCC---CCCccCceEEEEEEEeCCC---CCCCCe
Confidence 355554 356799999999999999999999999999999988877653 5778999999999999988 689999
Q ss_pred EEEeccccCCCCCccccCCCCccccccccccccccCCCCccCCcceeeEEeecceEEEcCCCCCcccccccchhhHHHHH
Q 022313 91 VGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYT 170 (299)
Q Consensus 91 V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~ 170 (299)
|...+. .+|+.|.+|..+.+..|.+.... +. ....|+|++|+.++.+.++++|++++.++++.+ ..+.++|.
T Consensus 75 V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~~----~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~~~~ 146 (319)
T cd08242 75 VVGEIN-IACGRCEYCRRGLYTHCPNRTVL--GI----VDRDGAFAEYLTLPLENLHVVPDLVPDEQAVFA-EPLAAALE 146 (319)
T ss_pred EEECCC-cCCCCChhhhCcCcccCCCCccc--Cc----cCCCCceEEEEEechHHeEECcCCCCHHHhhhh-hHHHHHHH
Confidence 976555 47999999999999998875432 10 023589999999999999999999999887754 45556666
Q ss_pred HhhhccCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEEeCCCHHHHHHhcCCccEEEE
Q 022313 171 PMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIID 250 (299)
Q Consensus 171 al~~~~~~~~g~~vlI~G~g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~v~d 250 (299)
++. ...++++++|+|+|+|.+|++++|+|+..|+++++++.++++.+.+ +++|++.+++..+. .-.+++|+++|
T Consensus 147 ~~~-~~~~~~g~~vlV~g~g~vg~~~~q~a~~~G~~vi~~~~~~~~~~~~-~~~g~~~~~~~~~~----~~~~~~d~vid 220 (319)
T cd08242 147 ILE-QVPITPGDKVAVLGDGKLGLLIAQVLALTGPDVVLVGRHSEKLALA-RRLGVETVLPDEAE----SEGGGFDVVVE 220 (319)
T ss_pred HHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCeEEEEcCCHHHHHHH-HHcCCcEEeCcccc----ccCCCCCEEEE
Confidence 654 4556999999999989999999999999999999999998888888 56999888776432 12367999999
Q ss_pred cCCCchhHHHHHHhcccCcEEEEEcCC-CceeeChhhhhcCCeeeeee
Q 022313 251 TASGDHPFDAYMSLLKVAGVYVLVGFP-SKVKFSPASLNIGNAPLFRF 297 (299)
Q Consensus 251 ~~g~~~~~~~~~~~l~~~G~~v~~g~~-~~~~~~~~~l~~~~~~~~g~ 297 (299)
++|+...+..++++++++|+++..+.. ....++...+..++++++|.
T Consensus 221 ~~g~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~i~~~ 268 (319)
T cd08242 221 ATGSPSGLELALRLVRPRGTVVLKSTYAGPASFDLTKAVVNEITLVGS 268 (319)
T ss_pred CCCChHHHHHHHHHhhcCCEEEEEcccCCCCccCHHHheecceEEEEE
Confidence 999866689999999999999998766 56677777888899998875
No 65
>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase. Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i
Probab=100.00 E-value=3.7e-33 Score=251.59 Aligned_cols=275 Identities=25% Similarity=0.381 Sum_probs=228.7
Q ss_pred eEEeeeCCCCcccceeeecCCCCCCcEEEEEceeecccchhhhhccCCCCCCCCccccccccEEEEEecCCCCCcccCCE
Q 022313 11 LGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDH 90 (299)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~ 90 (299)
+++.+. .++.+.+.+.+.|++.+++|+|+++++++|+.|+..+.|.+.....|.++|+|++|+|+++|+++..+++||+
T Consensus 2 ~~~~~~-~~~~~~~~~~~~~~l~~~~v~i~v~~~~l~~~d~~~~~g~~~~~~~~~~~g~~~~G~V~~~G~~v~~~~~Gd~ 80 (343)
T cd08235 2 KAAVLH-GPNDVRLEEVPVPEPGPGEVLVKVRACGICGTDVKKIRGGHTDLKPPRILGHEIAGEIVEVGDGVTGFKVGDR 80 (343)
T ss_pred eEEEEe-cCCceEEEEccCCCCCCCeEEEEEEEeeeccccHHHHcCCCccCCCCcccccceEEEEEeeCCCCCCCCCCCE
Confidence 355553 4567889999999999999999999999999999988776543345678999999999999999999999999
Q ss_pred EEEeccccCCCCCccccCCCCccccccccccccccCCCCccCCcceeeEEeecce-----EEEcCCCCCcccccccchhh
Q 022313 91 VGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERY-----CYKIANDYPLALAAPLLCAG 165 (299)
Q Consensus 91 V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~-----~~~~p~~~~~~~aa~~~~~~ 165 (299)
|...+ ..+|++|.+|.+++.+.|.+..+. |....|+|++|+.++++. ++++|+++++.+++.+ ..+
T Consensus 81 V~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~v~v~~~~~~~~~~~~lP~~~~~~~aa~~-~~~ 151 (343)
T cd08235 81 VFVAP-HVPCGECHYCLRGNENMCPNYKKF-------GNLYDGGFAEYVRVPAWAVKRGGVLKLPDNVSFEEAALV-EPL 151 (343)
T ss_pred EEEcc-CCCCCCChHHHCcCcccCCCccee-------ccCCCCcceeeEEecccccccccEEECCCCCCHHHHHhh-hHH
Confidence 98754 458999999999999999876432 223469999999999988 9999999999998766 788
Q ss_pred HHHHHHhhhccCCCCCCEEEEEcCChHHHHHHHHHHHCCCe-EEEEeCCchHHHHHHHhcCCCEEEeCCCHHH---HHHh
Q 022313 166 ITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLN-VTVLSTSTSKKEEALSLLGADKFVVSSDLEQ---MKAL 241 (299)
Q Consensus 166 ~ta~~al~~~~~~~~g~~vlI~G~g~~G~~a~~~a~~~g~~-v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~---~~~~ 241 (299)
.++|+++... .++++++|+|+|+|.+|++++++|+..|++ ++++++++++.+.+ +++|.++++++++.+. +.+.
T Consensus 152 ~~a~~~l~~~-~~~~g~~VlV~g~g~vg~~~~~la~~~g~~~v~~~~~s~~~~~~~-~~~g~~~~~~~~~~~~~~~i~~~ 229 (343)
T cd08235 152 ACCINAQRKA-GIKPGDTVLVIGAGPIGLLHAMLAKASGARKVIVSDLNEFRLEFA-KKLGADYTIDAAEEDLVEKVREL 229 (343)
T ss_pred HHHHHHHHhc-CCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHH-HHhCCcEEecCCccCHHHHHHHH
Confidence 9999998766 579999999998899999999999999998 98888888888887 5899999888776433 2233
Q ss_pred c--CCccEEEEcCCCchhHHHHHHhcccCcEEEEEcCC---CceeeChhhhhcCCeeeeee
Q 022313 242 G--KSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP---SKVKFSPASLNIGNAPLFRF 297 (299)
Q Consensus 242 ~--~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~---~~~~~~~~~l~~~~~~~~g~ 297 (299)
. +++|+++|++++......++++++++|+++.+|.. ....+++..+..+++++.++
T Consensus 230 ~~~~~vd~vld~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 290 (343)
T cd08235 230 TDGRGADVVIVATGSPEAQAQALELVRKGGRILFFGGLPKGSTVNIDPNLIHYREITITGS 290 (343)
T ss_pred hCCcCCCEEEECCCChHHHHHHHHHhhcCCEEEEEeccCCCCCcccCHHHHhhCceEEEEE
Confidence 2 46999999999775688999999999999999876 23556666777788888765
No 66
>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like. This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=3.6e-33 Score=251.93 Aligned_cols=275 Identities=22% Similarity=0.310 Sum_probs=222.5
Q ss_pred eEEeeeCCCCcccceeeecCCC-CCCcEEEEEceeecccchhhhhccCCCCCCCCccccccccEEEEEecCCCCCcccCC
Q 022313 11 LGWAARDPSGVLSPYSFNRRAV-GSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGD 89 (299)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~p~~-~~~evlv~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd 89 (299)
+++.+. .++.+++++++.|.+ +++||+||+.++++|++|++.+.|.++ ...|.++|||++|+|+++|+++..+++||
T Consensus 2 ~~~~~~-~~~~~~~~~~~~p~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~-~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd 79 (345)
T cd08287 2 RATVIH-GPGDIRVEEVPDPVIEEPTDAVIRVVATCVCGSDLWPYRGVSP-TRAPAPIGHEFVGVVEEVGSEVTSVKPGD 79 (345)
T ss_pred ceeEEe-cCCceeEEeCCCCCCCCCCeEEEEEeeeeecccchhhhcCCCC-CCCCcccccceEEEEEEeCCCCCccCCCC
Confidence 344453 456799999999996 899999999999999999888877664 24578899999999999999999999999
Q ss_pred EEEEeccccCCCCCccccCCCCccccccccccccccCCCCccCCcceeeEEeecc--eEEEcCCCCCccccc-----ccc
Q 022313 90 HVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHER--YCYKIANDYPLALAA-----PLL 162 (299)
Q Consensus 90 ~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~--~~~~~p~~~~~~~aa-----~~~ 162 (299)
+|... ....|+.|..|..+...+|.+..+. +....|+|++|+.++.+ .++++|++++++.+. ++.
T Consensus 80 ~V~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~v~~~~~~~~~lP~~l~~~~~~~~~~~~l~ 151 (345)
T cd08287 80 FVIAP-FAISDGTCPFCRAGFTTSCVHGGFW-------GAFVDGGQGEYVRVPLADGTLVKVPGSPSDDEDLLPSLLALS 151 (345)
T ss_pred EEEec-cccCCCCChhhhCcCcccCCCCCcc-------cCCCCCceEEEEEcchhhCceEECCCCCChhhhhhhhhHhhh
Confidence 99763 3457999999999999999975432 23466999999999975 899999999882211 233
Q ss_pred hhhHHHHHHhhhccCCCCCCEEEEEcCChHHHHHHHHHHHCCCe-EEEEeCCchHHHHHHHhcCCCEEEeCCCHHH---H
Q 022313 163 CAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLN-VTVLSTSTSKKEEALSLLGADKFVVSSDLEQ---M 238 (299)
Q Consensus 163 ~~~~ta~~al~~~~~~~~g~~vlI~G~g~~G~~a~~~a~~~g~~-v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~---~ 238 (299)
+.+.++|++++. ..++++++|+|.|+|++|++++|+|+..|++ ++++++++++.+.+ +++|+++++++++.+. +
T Consensus 152 ~~~~~a~~~~~~-~~~~~g~~vlI~g~g~vg~~~~~lak~~G~~~v~~~~~~~~~~~~~-~~~ga~~v~~~~~~~~~~~i 229 (345)
T cd08287 152 DVMGTGHHAAVS-AGVRPGSTVVVVGDGAVGLCAVLAAKRLGAERIIAMSRHEDRQALA-REFGATDIVAERGEEAVARV 229 (345)
T ss_pred cHHHHHHHHHHh-cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHcCCceEecCCcccHHHHH
Confidence 678889998864 4558999999988899999999999999995 77777776666655 7899999998876433 3
Q ss_pred HHhc--CCccEEEEcCCCchhHHHHHHhcccCcEEEEEcCC-CceeeChhhhhcCCeeeeee
Q 022313 239 KALG--KSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP-SKVKFSPASLNIGNAPLFRF 297 (299)
Q Consensus 239 ~~~~--~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~-~~~~~~~~~l~~~~~~~~g~ 297 (299)
.+.. .++|+++|++|+...+..++++++++|+++.+|.. ....+++...+.+++++.+.
T Consensus 230 ~~~~~~~~~d~il~~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~ 291 (345)
T cd08287 230 RELTGGVGADAVLECVGTQESMEQAIAIARPGGRVGYVGVPHGGVELDVRELFFRNVGLAGG 291 (345)
T ss_pred HHhcCCCCCCEEEECCCCHHHHHHHHHhhccCCEEEEecccCCCCccCHHHHHhcceEEEEe
Confidence 3332 47999999999876799999999999999999877 45566766677899988764
No 67
>PLN02702 L-idonate 5-dehydrogenase
Probab=100.00 E-value=4.7e-33 Score=253.15 Aligned_cols=270 Identities=23% Similarity=0.386 Sum_probs=215.9
Q ss_pred CCCcccceeeecCCCCCCcEEEEEceeecccchhhhhccCCC---CCCCCccccccccEEEEEecCCCCCcccCCEEEEe
Q 022313 18 PSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG---DSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVG 94 (299)
Q Consensus 18 ~~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~D~~~~~g~~~---~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~V~~~ 94 (299)
.++.+++++.+.|++.++||+||++++++|++|++.+.+... ....|.++|||++|+|+++|+++.+|++||+|...
T Consensus 25 ~~~~l~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~ 104 (364)
T PLN02702 25 GVNTLKIQPFKLPPLGPHDVRVRMKAVGICGSDVHYLKTMRCADFVVKEPMVIGHECAGIIEEVGSEVKHLVVGDRVALE 104 (364)
T ss_pred cCCceEEEeccCCCCCCCeEEEEEEEEEEchhhhHHHcCCCCccccCCCCcccccceeEEEEEECCCCCCCCCCCEEEEc
Confidence 456788889999999999999999999999999988765321 12357789999999999999999999999999775
Q ss_pred ccccCCCCCccccCCCCccccccccccccccCCCCccCCcceeeEEeecceEEEcCCCCCcccccccchhhHHHHHHhhh
Q 022313 95 TYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMR 174 (299)
Q Consensus 95 ~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~al~~ 174 (299)
+. .+|+.|.+|..+.++.|+...+. +. ....|+|++|+.++.+.++++|+++++.+++.. .++.++|+++ .
T Consensus 105 ~~-~~~~~c~~c~~g~~~~c~~~~~~--~~----~~~~g~~~~y~~v~~~~~~~~P~~l~~~~aa~~-~~~~~a~~~~-~ 175 (364)
T PLN02702 105 PG-ISCWRCNLCKEGRYNLCPEMKFF--AT----PPVHGSLANQVVHPADLCFKLPENVSLEEGAMC-EPLSVGVHAC-R 175 (364)
T ss_pred CC-CCCCCCcchhCcCcccCCCcccc--CC----CCCCCcccceEEcchHHeEECCCCCCHHHHhhh-hHHHHHHHHH-H
Confidence 55 59999999999999999864321 10 123699999999999999999999999888752 3444577777 4
Q ss_pred ccCCCCCCEEEEEcCChHHHHHHHHHHHCCCe-EEEEeCCchHHHHHHHhcCCCEEEeCC--CH---HHHHHh----cCC
Q 022313 175 HKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLN-VTVLSTSTSKKEEALSLLGADKFVVSS--DL---EQMKAL----GKS 244 (299)
Q Consensus 175 ~~~~~~g~~vlI~G~g~~G~~a~~~a~~~g~~-v~~~~~~~~~~~~~~~~~g~~~v~~~~--~~---~~~~~~----~~~ 244 (299)
...+.++++|+|+|+|++|++++++|+..|++ ++++++++++.+.+ +++|++.+++.. +. +.+..+ .++
T Consensus 176 ~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (364)
T PLN02702 176 RANIGPETNVLVMGAGPIGLVTMLAARAFGAPRIVIVDVDDERLSVA-KQLGADEIVLVSTNIEDVESEVEEIQKAMGGG 254 (364)
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHhCCCEEEecCcccccHHHHHHHHhhhcCCC
Confidence 44558999999999899999999999999995 66777776666665 789998877543 11 222222 357
Q ss_pred ccEEEEcCCCchhHHHHHHhcccCcEEEEEcCC-CceeeChhhhhcCCeeeeee
Q 022313 245 LDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP-SKVKFSPASLNIGNAPLFRF 297 (299)
Q Consensus 245 ~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~-~~~~~~~~~l~~~~~~~~g~ 297 (299)
+|++||++|+...+..++++++++|+++.+|.. ....+++..+..+++++.++
T Consensus 255 ~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~ 308 (364)
T PLN02702 255 IDVSFDCVGFNKTMSTALEATRAGGKVCLVGMGHNEMTVPLTPAAAREVDVVGV 308 (364)
T ss_pred CCEEEECCCCHHHHHHHHHHHhcCCEEEEEccCCCCCcccHHHHHhCccEEEEe
Confidence 999999999766699999999999999999976 44455667788899999886
No 68
>cd08232 idonate-5-DH L-idonate 5-dehydrogenase. L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai
Probab=100.00 E-value=3.8e-33 Score=251.22 Aligned_cols=275 Identities=21% Similarity=0.356 Sum_probs=222.7
Q ss_pred CCCCcccceeeecCCCCCCcEEEEEceeecccchhhhhc-cCCC--CCCCCccccccccEEEEEecCCCCCcccCCEEEE
Q 022313 17 DPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTR-NKHG--DSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGV 93 (299)
Q Consensus 17 ~~~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~D~~~~~-g~~~--~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~V~~ 93 (299)
.+++.+++.+.+.|+++++||+||+.++++|++|.+.+. +... ....|.++|+|++|+|+++|+++.+|++||+|..
T Consensus 4 ~~~~~~~~~~~~~p~l~~~~v~I~v~~~~i~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~ 83 (339)
T cd08232 4 HAAGDLRVEERPAPEPGPGEVRVRVAAGGICGSDLHYYQHGGFGTVRLREPMVLGHEVSGVVEAVGPGVTGLAPGQRVAV 83 (339)
T ss_pred ccCCceEEEEcCCCCCCCCEEEEEEEEEEECcccHHHHcCCCCCcccccCCeecCccceEEEEeeCCCCCcCCCCCEEEE
Confidence 356789999999999999999999999999999987763 3221 1235678999999999999999999999999977
Q ss_pred eccccCCCCCccccCCCCccccccccccccccCCCCccCCcceeeEEeecceEEEcCCCCCcccccccchhhHHHHHHhh
Q 022313 94 GTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMM 173 (299)
Q Consensus 94 ~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~al~ 173 (299)
.+. ++|+.|.+|..|...+|....+. +..... ....|+|++|+.++.+.++++|+++++++++. ..++.++|+++.
T Consensus 84 ~~~-~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~-~~~~g~~~~~v~v~~~~~~~iP~~~~~~~aa~-~~~~~~a~~~l~ 159 (339)
T cd08232 84 NPS-RPCGTCDYCRAGRPNLCLNMRFL-GSAMRF-PHVQGGFREYLVVDASQCVPLPDGLSLRRAAL-AEPLAVALHAVN 159 (339)
T ss_pred ccC-CcCCCChHHhCcCcccCccccce-eecccc-CCCCCceeeEEEechHHeEECcCCCCHHHhhh-cchHHHHHHHHH
Confidence 644 58999999999999999974321 100000 12469999999999999999999999998875 568889999998
Q ss_pred hccCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCchHHHHHHHhcCCCEEEeCCCHHHHHHh---cCCccEEE
Q 022313 174 RHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKAL---GKSLDFII 249 (299)
Q Consensus 174 ~~~~~~~g~~vlI~G~g~~G~~a~~~a~~~g~-~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~---~~~~d~v~ 249 (299)
....+ ++++|||.|+|.+|++++|+|+..|+ +++++++++++.+.+ +++|.+++++.++.. +.+. .+++|+++
T Consensus 160 ~~~~~-~~~~VLI~g~g~vG~~~~~lak~~G~~~v~~~~~s~~~~~~~-~~~g~~~vi~~~~~~-~~~~~~~~~~vd~vl 236 (339)
T cd08232 160 RAGDL-AGKRVLVTGAGPIGALVVAAARRAGAAEIVATDLADAPLAVA-RAMGADETVNLARDP-LAAYAADKGDFDVVF 236 (339)
T ss_pred hcCCC-CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHH-HHcCCCEEEcCCchh-hhhhhccCCCccEEE
Confidence 87775 99999998889999999999999999 788888887777755 789999988876543 2222 24699999
Q ss_pred EcCCCchhHHHHHHhcccCcEEEEEcCC-CceeeChhhhhcCCeeeeeec
Q 022313 250 DTASGDHPFDAYMSLLKVAGVYVLVGFP-SKVKFSPASLNIGNAPLFRFK 298 (299)
Q Consensus 250 d~~g~~~~~~~~~~~l~~~G~~v~~g~~-~~~~~~~~~l~~~~~~~~g~~ 298 (299)
|+.++....+.++++|+++|+++.+|.. .....++..++.+++++.++.
T Consensus 237 d~~g~~~~~~~~~~~L~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~ 286 (339)
T cd08232 237 EASGAPAALASALRVVRPGGTVVQVGMLGGPVPLPLNALVAKELDLRGSF 286 (339)
T ss_pred ECCCCHHHHHHHHHHHhcCCEEEEEecCCCCccCcHHHHhhcceEEEEEe
Confidence 9999765588999999999999999866 345555666677888887753
No 69
>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina
Probab=100.00 E-value=3.6e-33 Score=249.51 Aligned_cols=240 Identities=22% Similarity=0.303 Sum_probs=206.5
Q ss_pred cccceeeecCCCCCCcEEEEEceeecccchhhhhccCCC-CCCCCccccccccEEEEEecCCCCCcccCCEEEEeccccC
Q 022313 21 VLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG-DSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNS 99 (299)
Q Consensus 21 ~~~~~~~~~p~~~~~evlv~v~~~~i~~~D~~~~~g~~~-~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~ 99 (299)
.+++.+++.|.+.++||+|||+++++|++|++.+.|.++ ....|.++|||++|+|+++|+++.++++||+|...+
T Consensus 15 ~~~~~~~~~p~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~---- 90 (324)
T cd08292 15 VLEIGEVPKPTPGAGEVLVRTTLSPIHNHDLWTIRGTYGYKPELPAIGGSEAVGVVDAVGEGVKGLQVGQRVAVAP---- 90 (324)
T ss_pred eEEEeecCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCCCCCcceEEEEEEeCCCCCCCCCCCEEEecc----
Confidence 478899999999999999999999999999998877654 334678999999999999999999999999997421
Q ss_pred CCCCccccCCCCccccccccccccccCCCCccCCcceeeEEeecceEEEcCCCCCcccccccchhhHHHHHHhhhccCCC
Q 022313 100 CRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQ 179 (299)
Q Consensus 100 c~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~al~~~~~~~ 179 (299)
..|+|++|+.++...++++|+++++++++.+++.+.++|+++.. ..++
T Consensus 91 -------------------------------~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~~~~-~~~~ 138 (324)
T cd08292 91 -------------------------------VHGTWAEYFVAPADGLVPLPDGISDEVAAQLIAMPLSALMLLDF-LGVK 138 (324)
T ss_pred -------------------------------CCCcceeEEEEchHHeEECCCCCCHHHhhhccccHHHHHHHHHh-hCCC
Confidence 24899999999999999999999999999999899999998865 4569
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEEeCCCHHH---HHHhc--CCccEEEEcCC
Q 022313 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQ---MKALG--KSLDFIIDTAS 253 (299)
Q Consensus 180 ~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~---~~~~~--~~~d~v~d~~g 253 (299)
++++|||+|+ |.+|++++|+|+.+|++++++++++++.+.+ +++|.+++++.++.+. +.+.. +++|++||++|
T Consensus 139 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~g 217 (324)
T cd08292 139 PGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAEL-RALGIGPVVSTEQPGWQDKVREAAGGAPISVALDSVG 217 (324)
T ss_pred CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHH-HhcCCCEEEcCCCchHHHHHHHHhCCCCCcEEEECCC
Confidence 9999999987 9999999999999999999999999888888 4689999888776433 33333 57999999999
Q ss_pred CchhHHHHHHhcccCcEEEEEcCC--CceeeChhhhhcCCeeeeeec
Q 022313 254 GDHPFDAYMSLLKVAGVYVLVGFP--SKVKFSPASLNIGNAPLFRFK 298 (299)
Q Consensus 254 ~~~~~~~~~~~l~~~G~~v~~g~~--~~~~~~~~~l~~~~~~~~g~~ 298 (299)
+.. ...++++++++|+++.+|.. ...++++..++.+++++.++.
T Consensus 218 ~~~-~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (324)
T cd08292 218 GKL-AGELLSLLGEGGTLVSFGSMSGEPMQISSGDLIFKQATVRGFW 263 (324)
T ss_pred Chh-HHHHHHhhcCCcEEEEEecCCCCCCcCCHHHHhhCCCEEEEEE
Confidence 875 88999999999999999976 345667777778999988763
No 70
>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH). Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo
Probab=100.00 E-value=8.6e-33 Score=252.35 Aligned_cols=279 Identities=23% Similarity=0.250 Sum_probs=220.7
Q ss_pred EEeeeCCCCcccceeeecCCC-CCCcEEEEEceeecccchhhhhccCCCCCCCCccccccccEEEEEecCCCCCcccCCE
Q 022313 12 GWAARDPSGVLSPYSFNRRAV-GSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDH 90 (299)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~p~~-~~~evlv~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~ 90 (299)
++.+ ..++.+++++++.|++ .++||+|||+++++|++|++.+.|.++ ...|.++|||++|+|+++|+++..+++||+
T Consensus 3 ~~~~-~~~~~~~~~~~~~p~~~~~~evlv~v~a~~i~~~D~~~~~g~~~-~~~p~~~g~e~~G~V~~vG~~v~~~~~Gd~ 80 (375)
T cd08282 3 AVVY-GGPGNVAVEDVPDPKIEHPTDAIVRITTTAICGSDLHMYRGRTG-AEPGLVLGHEAMGEVEEVGSAVESLKVGDR 80 (375)
T ss_pred eEEE-ecCCceeEEeCCCCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCC-CCCCceeccccEEEEEEeCCCCCcCCCCCE
Confidence 4444 3567899999999996 799999999999999999999888765 346889999999999999999999999999
Q ss_pred EEEeccccCCCCCccccCCCCcccccccccccccc---CCCCccCCcceeeEEeecc--eEEEcCCCCCcc---cccccc
Q 022313 91 VGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAID---ADGTITKGGYSSYIVVHER--YCYKIANDYPLA---LAAPLL 162 (299)
Q Consensus 91 V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~---~~g~~~~g~~~~~~~~~~~--~~~~~p~~~~~~---~aa~~~ 162 (299)
|...+ ..+|+.|.+|..++...|.+....+.+.. .......|+|++|+.++.+ .++++|+++++. +++.+.
T Consensus 81 V~~~~-~~~~g~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~~lP~~~~~~~~~~~a~~~ 159 (375)
T cd08282 81 VVVPF-NVACGRCRNCKRGLTGVCLTVNPGRAGGAYGYVDMGPYGGGQAEYLRVPYADFNLLKLPDRDGAKEKDDYLMLS 159 (375)
T ss_pred EEEeC-CCCCCCCHHHHCcCcccCCCCCcccccccccccccCCCCCeeeeEEEeecccCcEEECCCCCChhhhhheeeec
Confidence 97654 45899999999999999986432211100 0011235899999999976 899999999998 567888
Q ss_pred hhhHHHHHHhhhccCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCchHHHHHHHhcCCCEEEeCCCHHH---H
Q 022313 163 CAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKFVVSSDLEQ---M 238 (299)
Q Consensus 163 ~~~~ta~~al~~~~~~~~g~~vlI~G~g~~G~~a~~~a~~~g~-~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~---~ 238 (299)
+.+.++|+++ ....++++++|+|.|+|++|++++|+|+..|+ +++++++++++.+.+ +++|++ .++..+.+. +
T Consensus 160 ~~~~ta~~a~-~~~~~~~g~~vlI~g~g~vg~~~~~~a~~~G~~~vi~~~~~~~~~~~~-~~~g~~-~v~~~~~~~~~~i 236 (375)
T cd08282 160 DIFPTGWHGL-ELAGVQPGDTVAVFGAGPVGLMAAYSAILRGASRVYVVDHVPERLDLA-ESIGAI-PIDFSDGDPVEQI 236 (375)
T ss_pred chHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHcCCe-EeccCcccHHHHH
Confidence 8999999998 45566899999999889999999999999998 798888887777766 689984 456554332 2
Q ss_pred HHh-cCCccEEEEcCCCch-----------hHHHHHHhcccCcEEEEEcCC-C-------------ceeeChhhhhcCCe
Q 022313 239 KAL-GKSLDFIIDTASGDH-----------PFDAYMSLLKVAGVYVLVGFP-S-------------KVKFSPASLNIGNA 292 (299)
Q Consensus 239 ~~~-~~~~d~v~d~~g~~~-----------~~~~~~~~l~~~G~~v~~g~~-~-------------~~~~~~~~l~~~~~ 292 (299)
.++ .+++|+++|++|+.. .+..++++++++|+++.+|.. . ...+++..++.++.
T Consensus 237 ~~~~~~~~d~v~d~~g~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (375)
T cd08282 237 LGLEPGGVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPGGGIGIVGVYVAEDPGAGDAAAKQGELSFDFGLLWAKGL 316 (375)
T ss_pred HHhhCCCCCEEEECCCCcccccccccchHHHHHHHHHHhhcCcEEEEEeccCCcccccccccccCccccccHHHHHhcCc
Confidence 333 257999999999762 478899999999999988864 1 13456666777777
Q ss_pred eeee
Q 022313 293 PLFR 296 (299)
Q Consensus 293 ~~~g 296 (299)
.+.+
T Consensus 317 ~~~~ 320 (375)
T cd08282 317 SFGT 320 (375)
T ss_pred EEEE
Confidence 6644
No 71
>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2. Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical
Probab=100.00 E-value=5e-33 Score=250.87 Aligned_cols=276 Identities=25% Similarity=0.328 Sum_probs=223.7
Q ss_pred EEeeeCCCCcccceeeecCCCC-CCcEEEEEceeecccchhhhhccCCCCCCCCccccccccEEEEEecCCCCCcccCCE
Q 022313 12 GWAARDPSGVLSPYSFNRRAVG-SDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDH 90 (299)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~p~~~-~~evlv~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~ 90 (299)
++.+. +++.+++++++.|++. ++||+|+++++++|+.|.+...|.+. ...|.++|+|++|+|+++|+++.++++||+
T Consensus 3 a~~~~-~~~~~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~-~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~ 80 (344)
T cd08284 3 AVVFK-GPGDVRVEEVPIPQIQDPTDAIVKVTAAAICGSDLHIYRGHIP-STPGFVLGHEFVGEVVEVGPEVRTLKVGDR 80 (344)
T ss_pred eEEEe-cCCCceEEeccCCCCCCCCeEEEEEEEeeccccchhhhcCCCC-CCCCcccccceEEEEEeeCCCccccCCCCE
Confidence 55553 4567999999999985 99999999999999999988877664 344778999999999999999999999999
Q ss_pred EEEeccccCCCCCccccCCCCccccccccccccccCCCCccCCcceeeEEeecc--eEEEcCCCCCcccccccchhhHHH
Q 022313 91 VGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHER--YCYKIANDYPLALAAPLLCAGITV 168 (299)
Q Consensus 91 V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~--~~~~~p~~~~~~~aa~~~~~~~ta 168 (299)
|...+. .+|+.|.+|..+.+.+|....+. |... ....+|+|++|+.++++ .++++|+++++++++.+++++.|+
T Consensus 81 V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~g~~~~~~~v~~~~~~~~~~p~~l~~~~a~~l~~~~~ta 156 (344)
T cd08284 81 VVSPFT-IACGECFYCRRGQSGRCAKGGLF--GYAG-SPNLDGAQAEYVRVPFADGTLLKLPDGLSDEAALLLGDILPTG 156 (344)
T ss_pred EEEccc-CCCCCChHHhCcCcccCCCCccc--cccc-cCCCCCceeEEEEcccccCceEECCCCCCHHHhhhhcCchHHH
Confidence 987665 48999999999999999865321 1000 01236899999999965 999999999999999999999999
Q ss_pred HHHhhhccCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCchHHHHHHHhcCCCEEEeCCCH---HHHHHhc--
Q 022313 169 YTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKFVVSSDL---EQMKALG-- 242 (299)
Q Consensus 169 ~~al~~~~~~~~g~~vlI~G~g~~G~~a~~~a~~~g~-~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~---~~~~~~~-- 242 (299)
|+++.. ..+.++++|+|+|+|.+|++++++|+..|+ +++++++++++.+.+ +++|++. ++.+.. ..+.++.
T Consensus 157 ~~~~~~-~~~~~~~~vlI~g~g~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~-~~~g~~~-~~~~~~~~~~~l~~~~~~ 233 (344)
T cd08284 157 YFGAKR-AQVRPGDTVAVIGCGPVGLCAVLSAQVLGAARVFAVDPVPERLERA-AALGAEP-INFEDAEPVERVREATEG 233 (344)
T ss_pred HhhhHh-cCCccCCEEEEECCcHHHHHHHHHHHHcCCceEEEEcCCHHHHHHH-HHhCCeE-EecCCcCHHHHHHHHhCC
Confidence 999976 455899999999889999999999999997 899987777777666 6799753 444432 2233332
Q ss_pred CCccEEEEcCCCchhHHHHHHhcccCcEEEEEcCC--CceeeChhhhhcCCeeeee
Q 022313 243 KSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP--SKVKFSPASLNIGNAPLFR 296 (299)
Q Consensus 243 ~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~--~~~~~~~~~l~~~~~~~~g 296 (299)
+++|++||++++......++++++++|+++.+|.. ....++...++.+++++.+
T Consensus 234 ~~~dvvid~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~ 289 (344)
T cd08284 234 RGADVVLEAVGGAAALDLAFDLVRPGGVISSVGVHTAEEFPFPGLDAYNKNLTLRF 289 (344)
T ss_pred CCCCEEEECCCCHHHHHHHHHhcccCCEEEEECcCCCCCccccHHHHhhcCcEEEE
Confidence 57999999999866689999999999999999977 3444556666777877754
No 72
>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,
Probab=100.00 E-value=1e-32 Score=248.29 Aligned_cols=273 Identities=26% Similarity=0.424 Sum_probs=223.5
Q ss_pred eEEeeeCCCCcccceeeecCCCCCCcEEEEEceeecccchhhhhccCCCCCCCCccccccccEEEEEecCCCCCcccCCE
Q 022313 11 LGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDH 90 (299)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~ 90 (299)
+++... .++.+++.+++.|++.++|++|+|.++++|+.|...+.+..+....|.++|+|++|+|+.+|+++++|++||+
T Consensus 2 ~a~~~~-~~~~~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~~Gd~ 80 (337)
T cd08261 2 KALVCE-KPGRLEVVDIPEPVPGAGEVLVRVKRVGICGSDLHIYHGRNPFASYPRILGHELSGEVVEVGEGVAGLKVGDR 80 (337)
T ss_pred eEEEEe-CCCceEEEECCCCCCCCCeEEEEEEEEeEcccChHHHcCCCCcCCCCcccccccEEEEEEeCCCCCCCCCCCE
Confidence 344443 3467889999999999999999999999999999888776654455778999999999999999999999999
Q ss_pred EEEeccccCCCCCccccCCCCccccccccccccccCCCCccCCcceeeEEeecceEEEcCCCCCcccccccchhhHHHHH
Q 022313 91 VGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYT 170 (299)
Q Consensus 91 V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~ 170 (299)
|...+. .+|+.|..|+.++++.|...... +....|+|++|+.++++ ++++|+++++++++.+ ..+.++++
T Consensus 81 V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~v~v~~~-~~~~p~~~~~~~aa~~-~~~~~a~~ 150 (337)
T cd08261 81 VVVDPY-ISCGECYACRKGRPNCCENLQVL-------GVHRDGGFAEYIVVPAD-ALLVPEGLSLDQAALV-EPLAIGAH 150 (337)
T ss_pred EEECCC-CCCCCChhhhCcCcccCCCCCee-------eecCCCcceeEEEechh-eEECCCCCCHHHhhhh-chHHHHHH
Confidence 976544 48999999999999999533211 11235899999999999 9999999999998876 56778888
Q ss_pred HhhhccCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEEeCCCHH---HHHHhc--CCc
Q 022313 171 PMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLE---QMKALG--KSL 245 (299)
Q Consensus 171 al~~~~~~~~g~~vlI~G~g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~---~~~~~~--~~~ 245 (299)
++ ....++++++|||+|+|.+|++++|+|+..|++|+++++++++.+.+ +++|++++++..+.+ .+.+.. +++
T Consensus 151 ~~-~~~~l~~g~~vLI~g~g~vG~~a~~lA~~~g~~v~~~~~s~~~~~~~-~~~g~~~v~~~~~~~~~~~l~~~~~~~~v 228 (337)
T cd08261 151 AV-RRAGVTAGDTVLVVGAGPIGLGVIQVAKARGARVIVVDIDDERLEFA-RELGADDTINVGDEDVAARLRELTDGEGA 228 (337)
T ss_pred HH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCeEEEECCCHHHHHHH-HHhCCCEEecCcccCHHHHHHHHhCCCCC
Confidence 87 45566999999999889999999999999999999999988888877 789999998877543 233332 569
Q ss_pred cEEEEcCCCchhHHHHHHhcccCcEEEEEcCC-CceeeChhhhhcCCeeeee
Q 022313 246 DFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP-SKVKFSPASLNIGNAPLFR 296 (299)
Q Consensus 246 d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~-~~~~~~~~~l~~~~~~~~g 296 (299)
|+++|+.|+......++++++++|+++.+|.. ....++...+..+++++.+
T Consensus 229 d~vld~~g~~~~~~~~~~~l~~~G~~i~~g~~~~~~~~~~~~~~~~~~~~~~ 280 (337)
T cd08261 229 DVVIDATGNPASMEEAVELVAHGGRVVLVGLSKGPVTFPDPEFHKKELTILG 280 (337)
T ss_pred CEEEECCCCHHHHHHHHHHHhcCCEEEEEcCCCCCCccCHHHHHhCCCEEEE
Confidence 99999998866689999999999999999877 4455666666667777665
No 73
>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family. This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone
Probab=100.00 E-value=9e-33 Score=247.96 Aligned_cols=271 Identities=24% Similarity=0.368 Sum_probs=226.1
Q ss_pred CCCcccceeeecCCCCCCcEEEEEceeecccchhhhhccCCC-CCCCCccccccccEEEEEecCCCCCcccCCEEEEecc
Q 022313 18 PSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG-DSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTY 96 (299)
Q Consensus 18 ~~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~D~~~~~g~~~-~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~V~~~~~ 96 (299)
.++.+++.+.+.|++.+++|+|++.++++|++|++.+.|... ....|.++|||++|+|+.+|+++..|++||+|.+.+.
T Consensus 11 ~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~ 90 (342)
T cd08266 11 GPEVLEYGDLPEPEPGPDEVLVRVKAAALNHLDLWVRRGMPGIKLPLPHILGSDGAGVVEAVGPGVTNVKPGQRVVIYPG 90 (342)
T ss_pred CccceeEeecCCCCCCCCeEEEEEEeeecCHHHHHHhcCCCCCCCCCCeecccceEEEEEEeCCCCCCCCCCCEEEEccc
Confidence 445677778888889999999999999999999988877543 2345778999999999999999999999999987655
Q ss_pred ccCCCCCccccCCCCccccccccccccccCCCCccCCcceeeEEeecceEEEcCCCCCcccccccchhhHHHHHHhhhcc
Q 022313 97 VNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHK 176 (299)
Q Consensus 97 ~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~al~~~~ 176 (299)
. +|+.|.+|..+.++.|++..+ . |....|++++|+.++.+.++++|+++++++++.++.++.++|+++....
T Consensus 91 ~-~~~~~~~~~~~~~~~~~~~~~--~-----g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~~a~~~l~~~~ 162 (342)
T cd08266 91 I-SCGRCEYCLAGRENLCAQYGI--L-----GEHVDGGYAEYVAVPARNLLPIPDNLSFEEAAAAPLTFLTAWHMLVTRA 162 (342)
T ss_pred c-ccccchhhccccccccccccc--c-----ccccCcceeEEEEechHHceeCCCCCCHHHHHhhhhHHHHHHHHHHHhc
Confidence 4 899999999999999997532 1 3335689999999999999999999999999999999999999987766
Q ss_pred CCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEEeCCCHHHHHH---h--cCCccEEEE
Q 022313 177 MNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKA---L--GKSLDFIID 250 (299)
Q Consensus 177 ~~~~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~---~--~~~~d~v~d 250 (299)
.+.++++++|+|+ +.+|++++++++..|++++++++++++.+.+ +.++.+.+++..+.+.... . .+++|++++
T Consensus 163 ~~~~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~ 241 (342)
T cd08266 163 RLRPGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERA-KELGADYVIDYRKEDFVREVRELTGKRGVDVVVE 241 (342)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCCCeEEecCChHHHHHHHHHhCCCCCcEEEE
Confidence 7789999999998 7999999999999999999999998888877 5788777777665433222 2 257999999
Q ss_pred cCCCchhHHHHHHhcccCcEEEEEcCC--CceeeChhhhhcCCeeeeeec
Q 022313 251 TASGDHPFDAYMSLLKVAGVYVLVGFP--SKVKFSPASLNIGNAPLFRFK 298 (299)
Q Consensus 251 ~~g~~~~~~~~~~~l~~~G~~v~~g~~--~~~~~~~~~l~~~~~~~~g~~ 298 (299)
++|... +...+++++++|+++.+|.. ....++....+.+++++.++.
T Consensus 242 ~~g~~~-~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (342)
T cd08266 242 HVGAAT-WEKSLKSLARGGRLVTCGATTGYEAPIDLRHVFWRQLSILGST 290 (342)
T ss_pred CCcHHH-HHHHHHHhhcCCEEEEEecCCCCCCCcCHHHHhhcceEEEEEe
Confidence 999865 88999999999999999877 334455555677888887753
No 74
>cd05285 sorbitol_DH Sorbitol dehydrogenase. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=6.3e-33 Score=250.29 Aligned_cols=270 Identities=26% Similarity=0.397 Sum_probs=220.6
Q ss_pred CCCcccceeeecCCCCCCcEEEEEceeecccchhhhhccC-CC--CCCCCccccccccEEEEEecCCCCCcccCCEEEEe
Q 022313 18 PSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNK-HG--DSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVG 94 (299)
Q Consensus 18 ~~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~D~~~~~g~-~~--~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~V~~~ 94 (299)
++..+++.+.+.|.+.++||+|||.++++|+.|.+.+.+. .+ ....|.++|+|++|+|+++|+++.+|++||+|.+.
T Consensus 6 ~~~~~~~~~~~~~~l~~~~vlV~v~~~~l~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~ 85 (343)
T cd05285 6 GPGDLRLEERPIPEPGPGEVLVRVRAVGICGSDVHYYKHGRIGDFVVKEPMVLGHESAGTVVAVGSGVTHLKVGDRVAIE 85 (343)
T ss_pred cCCceeEEECCCCCCCCCeEEEEEEEeeEccccHHHHccCCCcccCCCCCcccCcceeEEEEeeCCCCCCCCCCCEEEEc
Confidence 4467889999999999999999999999999998876422 11 12356789999999999999999999999999876
Q ss_pred ccccCCCCCccccCCCCccccccccccccccCCCCccCCcceeeEEeecceEEEcCCCCCcccccccchhhHHHHHHhhh
Q 022313 95 TYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMR 174 (299)
Q Consensus 95 ~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~al~~ 174 (299)
+. .+|+.|.+|+.+.+..|++..+. + .....|+|++|+.++++.++++|+++++.+++.+ .++.++|+++ .
T Consensus 86 ~~-~~~~~~~~~~~~~~~~~~~~~~~--~----~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~~-~ 156 (343)
T cd05285 86 PG-VPCRTCEFCKSGRYNLCPDMRFA--A----TPPVDGTLCRYVNHPADFCHKLPDNVSLEEGALV-EPLSVGVHAC-R 156 (343)
T ss_pred cc-cCCCCChhHhCcCcccCcCcccc--c----cccCCCceeeeEEecHHHcEECcCCCCHHHhhhh-hHHHHHHHHH-H
Confidence 55 49999999999999999864221 0 0123589999999999999999999999998876 5778888887 4
Q ss_pred ccCCCCCCEEEEEcCChHHHHHHHHHHHCCCe-EEEEeCCchHHHHHHHhcCCCEEEeCCCHH------HHHHhc--CCc
Q 022313 175 HKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLN-VTVLSTSTSKKEEALSLLGADKFVVSSDLE------QMKALG--KSL 245 (299)
Q Consensus 175 ~~~~~~g~~vlI~G~g~~G~~a~~~a~~~g~~-v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~------~~~~~~--~~~ 245 (299)
...++++++|+|.|+|++|++++|+|+..|++ |+++++++++.+.+ +++|++++++.++.. .+.+.. +++
T Consensus 157 ~~~~~~g~~vlI~g~g~vG~~a~~lak~~G~~~v~~~~~~~~~~~~~-~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~ 235 (343)
T cd05285 157 RAGVRPGDTVLVFGAGPIGLLTAAVAKAFGATKVVVTDIDPSRLEFA-KELGATHTVNVRTEDTPESAEKIAELLGGKGP 235 (343)
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHH-HHcCCcEEeccccccchhHHHHHHHHhCCCCC
Confidence 55569999999998899999999999999997 88888888887777 678999998876533 233332 569
Q ss_pred cEEEEcCCCchhHHHHHHhcccCcEEEEEcCC-CceeeChhhhhcCCeeeeee
Q 022313 246 DFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP-SKVKFSPASLNIGNAPLFRF 297 (299)
Q Consensus 246 d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~-~~~~~~~~~l~~~~~~~~g~ 297 (299)
|+++|+.|+......++++++++|+++.+|.. ....+++..+..+++++.++
T Consensus 236 d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~ 288 (343)
T cd05285 236 DVVIECTGAESCIQTAIYATRPGGTVVLVGMGKPEVTLPLSAASLREIDIRGV 288 (343)
T ss_pred CEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCCccCHHHHhhCCcEEEEe
Confidence 99999999875589999999999999999976 44455666677788887775
No 75
>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases. This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast
Probab=100.00 E-value=2e-32 Score=246.82 Aligned_cols=275 Identities=25% Similarity=0.414 Sum_probs=225.1
Q ss_pred eEEeeeCCCCcccceeeecCCCCCCcEEEEEceeecccchhhhhccCCCCCCCCccccccccEEEEEecCCCCCcccCCE
Q 022313 11 LGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDH 90 (299)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~ 90 (299)
+++.+. +.+.+.+++.+.|+++++||+||+.++++|+.|...+.+.+. ...|.++|+|++|+|+.+|+++..|++||+
T Consensus 2 ~a~~~~-~~~~l~~~~~~~~~l~~~~v~v~v~~~~~n~~d~~~~~~~~~-~~~~~~~g~~~~G~V~~~g~~v~~~~~Gd~ 79 (343)
T cd08236 2 KALVLT-GPGDLRYEDIPKPEPGPGEVLVKVKACGICGSDIPRYLGTGA-YHPPLVLGHEFSGTVEEVGSGVDDLAVGDR 79 (343)
T ss_pred eeEEEe-cCCceeEEecCCCCCCCCeEEEEEEEEEECccchHhhcCCCC-CCCCcccCcceEEEEEEECCCCCcCCCCCE
Confidence 344543 445788899999999999999999999999999988777552 345778999999999999999999999999
Q ss_pred EEEeccccCCCCCccccCCCCccccccccccccccCCCCccCCcceeeEEeecceEEEcCCCCCcccccccchhhHHHHH
Q 022313 91 VGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYT 170 (299)
Q Consensus 91 V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~ 170 (299)
|...+.. .|+.|.+|..+.+..|+..... |....|+|++|+.++++.++++|+++++.+++.+ ..+.++|+
T Consensus 80 V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~ta~~ 150 (343)
T cd08236 80 VAVNPLL-PCGKCEYCKKGEYSLCSNYDYI-------GSRRDGAFAEYVSVPARNLIKIPDHVDYEEAAMI-EPAAVALH 150 (343)
T ss_pred EEEcCCC-CCCCChhHHCcChhhCCCcceE-------ecccCCcccceEEechHHeEECcCCCCHHHHHhc-chHHHHHH
Confidence 9775554 7899999999999999875321 2235699999999999999999999999998877 57789999
Q ss_pred HhhhccCCCCCCEEEEEcCChHHHHHHHHHHHCCCe-EEEEeCCchHHHHHHHhcCCCEEEeCCCHH--HHHHhc--CCc
Q 022313 171 PMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLN-VTVLSTSTSKKEEALSLLGADKFVVSSDLE--QMKALG--KSL 245 (299)
Q Consensus 171 al~~~~~~~~g~~vlI~G~g~~G~~a~~~a~~~g~~-v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~--~~~~~~--~~~ 245 (299)
++.. ..++++++|+|+|+|.+|++++|+|+..|++ ++++++++++.+.+ +++|.+.+++.++.. .+.... +++
T Consensus 151 ~l~~-~~~~~~~~vlI~g~g~~g~~~~~lA~~~G~~~v~~~~~~~~~~~~l-~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 228 (343)
T cd08236 151 AVRL-AGITLGDTVVVIGAGTIGLLAIQWLKILGAKRVIAVDIDDEKLAVA-RELGADDTINPKEEDVEKVRELTEGRGA 228 (343)
T ss_pred HHHh-cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH-HHcCCCEEecCccccHHHHHHHhCCCCC
Confidence 9874 4568999999998899999999999999996 99999888888777 689998888876543 222222 469
Q ss_pred cEEEEcCCCchhHHHHHHhcccCcEEEEEcCC-Cc---eeeChhhhhcCCeeeeeec
Q 022313 246 DFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP-SK---VKFSPASLNIGNAPLFRFK 298 (299)
Q Consensus 246 d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~-~~---~~~~~~~l~~~~~~~~g~~ 298 (299)
|+++|++|+......++++++++|+++.+|.. .. ...++..++.+++++.|+.
T Consensus 229 d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (343)
T cd08236 229 DLVIEAAGSPATIEQALALARPGGKVVLVGIPYGDVTLSEEAFEKILRKELTIQGSW 285 (343)
T ss_pred CEEEECCCCHHHHHHHHHHhhcCCEEEEEcccCCCcccccCCHHHHHhcCcEEEEEe
Confidence 99999998766689999999999999999977 33 2233445567888888763
No 76
>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=100.00 E-value=6.7e-32 Score=243.27 Aligned_cols=263 Identities=24% Similarity=0.285 Sum_probs=206.0
Q ss_pred EEeeeCCCCcccceeeecCCCCCCcEEEEEceeecccchhhhhccCCC-----------CCCCCccccccccEEEEEecC
Q 022313 12 GWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG-----------DSKYPLVPGHEIVGIVKEVGH 80 (299)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~D~~~~~g~~~-----------~~~~p~~lG~e~~G~V~~vG~ 80 (299)
++.+..+ .+++++.+.|++.++||+|++.++++|+.|++.+.|... ....|.++|+|++|+|+++|+
T Consensus 3 a~~~~~~--~~~~~~~~~p~~~~~~v~V~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~ 80 (341)
T cd08262 3 AAVFRDG--PLVVRDVPDPEPGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLMDLGADIVLGHEFCGEVVDYGP 80 (341)
T ss_pred eEEEeCC--ceEEEecCCCCCCCCeEEEEEEEEEEcccchHHHcCCCcccccccccccccCCCCcccccceeEEEEEeCC
Confidence 4444333 788899999999999999999999999999988877321 123477899999999999999
Q ss_pred CCCC-cccCCEEEEeccccCCCCCccccCCCCccccccccccccccCCCCccCCcceeeEEeecceEEEcCCCCCccccc
Q 022313 81 NVSR-FKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAA 159 (299)
Q Consensus 81 ~v~~-~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa 159 (299)
+++. |++||+|+..+. ..|+.|..|..+.. ....|+|++|+.++.+.++++|+++++++++
T Consensus 81 ~v~~~~~~Gd~V~~~~~-~~~~~~~~~~~~~~-----------------~~~~g~~~~~~~v~~~~~~~lP~~~s~~~a~ 142 (341)
T cd08262 81 GTERKLKVGTRVTSLPL-LLCGQGASCGIGLS-----------------PEAPGGYAEYMLLSEALLLRVPDGLSMEDAA 142 (341)
T ss_pred CCcCCCCCCCEEEecCC-cCCCCChhhhCCCC-----------------cCCCCceeeeEEechHHeEECCCCCCHHHhh
Confidence 9987 999999987666 48999999943211 0235899999999999999999999998876
Q ss_pred ccchhhHHHHHHhhhccCCCCCCEEEEEcCChHHHHHHHHHHHCCCe-EEEEeCCchHHHHHHHhcCCCEEEeCCCHH--
Q 022313 160 PLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLN-VTVLSTSTSKKEEALSLLGADKFVVSSDLE-- 236 (299)
Q Consensus 160 ~~~~~~~ta~~al~~~~~~~~g~~vlI~G~g~~G~~a~~~a~~~g~~-v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~-- 236 (299)
++.++.++|+++ ....++++++|||+|+|++|.+++|+|+..|++ ++++++++++.+.+ +++|++++++.++..
T Consensus 143 -~~~~~~~a~~~~-~~~~~~~g~~VlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~-~~~g~~~~i~~~~~~~~ 219 (341)
T cd08262 143 -LTEPLAVGLHAV-RRARLTPGEVALVIGCGPIGLAVIAALKARGVGPIVASDFSPERRALA-LAMGADIVVDPAADSPF 219 (341)
T ss_pred -hhhhHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHH-HHcCCcEEEcCCCcCHH
Confidence 667888999986 445569999999998899999999999999996 55556666666655 789998888866431
Q ss_pred -H---HHHh--cCCccEEEEcCCCchhHHHHHHhcccCcEEEEEcCC-CceeeChhhhhcCCeeeeee
Q 022313 237 -Q---MKAL--GKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP-SKVKFSPASLNIGNAPLFRF 297 (299)
Q Consensus 237 -~---~~~~--~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~-~~~~~~~~~l~~~~~~~~g~ 297 (299)
. +... .+++|+++|++|+......++++++++|+++.+|.. ...++.+.....+++++.++
T Consensus 220 ~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~ 287 (341)
T cd08262 220 AAWAAELARAGGPKPAVIFECVGAPGLIQQIIEGAPPGGRIVVVGVCMESDNIEPALAIRKELTLQFS 287 (341)
T ss_pred HHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCCCccCHHHHhhcceEEEEE
Confidence 1 1112 357999999999854588899999999999999977 33334444344577776643
No 77
>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=3.8e-32 Score=245.57 Aligned_cols=258 Identities=25% Similarity=0.366 Sum_probs=206.1
Q ss_pred Cccccee-eecCCCCCCcEEEEEceeecccchhhhhccCCC--------------------CCCCCccccccccEEEEEe
Q 022313 20 GVLSPYS-FNRRAVGSDDVSITITHCGVCYADVIWTRNKHG--------------------DSKYPLVPGHEIVGIVKEV 78 (299)
Q Consensus 20 ~~~~~~~-~~~p~~~~~evlv~v~~~~i~~~D~~~~~g~~~--------------------~~~~p~~lG~e~~G~V~~v 78 (299)
..+.+.+ .+.|++.+++|+|||.++++|++|++.+.|.+. ....|.++|||++|+|+++
T Consensus 13 ~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e~~G~V~~v 92 (350)
T cd08274 13 DKLVYRDDVPVPTPAPGEVLIRVGACGVNNTDINTREGWYSTEVDGATDSTGAGEAGWWGGTLSFPRIQGADIVGRVVAV 92 (350)
T ss_pred cceeecccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCCccccccccccccccccccCCCCCCcccCCcceEEEEEe
Confidence 3455543 467778999999999999999999988876542 2346789999999999999
Q ss_pred cCCCCCcccCCEEEEeccccCCCCCccccCCCCccccccccccccccCCCCccCCcceeeEEeecceEEEcCCCCCcccc
Q 022313 79 GHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALA 158 (299)
Q Consensus 79 G~~v~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~a 158 (299)
|+++.+|++||+|+..+.. +|+.|..|.. |. + . |....|++++|+.++.+.++++|+++++.++
T Consensus 93 G~~v~~~~~Gd~V~~~~~~-~~~~~~~~~~-----~~---~--~-----~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~ 156 (350)
T cd08274 93 GEGVDTARIGERVLVDPSI-RDPPEDDPAD-----ID---Y--I-----GSERDGGFAEYTVVPAENAYPVNSPLSDVEL 156 (350)
T ss_pred CCCCCCCCCCCEEEEecCc-CCCCcccccc-----cc---c--c-----CCCCCccceEEEEecHHHceeCCCCCCHHHH
Confidence 9999999999999875443 5666654321 11 0 0 2223589999999999999999999999999
Q ss_pred cccchhhHHHHHHhhhccCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEEeCCCHHH
Q 022313 159 APLLCAGITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQ 237 (299)
Q Consensus 159 a~~~~~~~ta~~al~~~~~~~~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~ 237 (299)
+.+++++.|+|+++. ...++++++|||+|+ |++|++++++|+..|++++++++++ +.+.+ +++|++.+++..+...
T Consensus 157 a~l~~~~~ta~~~~~-~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~~vi~~~~~~-~~~~~-~~~g~~~~~~~~~~~~ 233 (350)
T cd08274 157 ATFPCSYSTAENMLE-RAGVGAGETVLVTGASGGVGSALVQLAKRRGAIVIAVAGAA-KEEAV-RALGADTVILRDAPLL 233 (350)
T ss_pred HhcccHHHHHHHHHh-hcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCch-hhHHH-HhcCCeEEEeCCCccH
Confidence 999999999999984 445699999999998 9999999999999999998888765 66666 6899876665543221
Q ss_pred --HHHh-cCCccEEEEcCCCchhHHHHHHhcccCcEEEEEcCC-Cc-eeeChhhhhcCCeeeeee
Q 022313 238 --MKAL-GKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP-SK-VKFSPASLNIGNAPLFRF 297 (299)
Q Consensus 238 --~~~~-~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~-~~-~~~~~~~l~~~~~~~~g~ 297 (299)
.... .+++|++||++|+.. ...++++++++|+++.+|.. .. .++++..++.+++++.|+
T Consensus 234 ~~~~~~~~~~~d~vi~~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~ 297 (350)
T cd08274 234 ADAKALGGEPVDVVADVVGGPL-FPDLLRLLRPGGRYVTAGAIAGPVVELDLRTLYLKDLTLFGS 297 (350)
T ss_pred HHHHhhCCCCCcEEEecCCHHH-HHHHHHHhccCCEEEEecccCCccccCCHHHhhhcceEEEEe
Confidence 1111 367999999999865 89999999999999999977 33 577778888899998875
No 78
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=100.00 E-value=4.2e-32 Score=245.30 Aligned_cols=253 Identities=21% Similarity=0.219 Sum_probs=199.6
Q ss_pred cccceEEeeeCCC------Cccccee---eecC-CCCCCcEEEEEceeecccchhhhhccCCCCCCCCccccc--cccEE
Q 022313 7 SKDCLGWAARDPS------GVLSPYS---FNRR-AVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGH--EIVGI 74 (299)
Q Consensus 7 ~~~~~~~~~~~~~------~~~~~~~---~~~p-~~~~~evlv~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~--e~~G~ 74 (299)
++..+.+.+...+ .+|++.+ .+.| ++.++|||||+.++++|+.|...+.+.......|.++|+ |++|+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~gevlVkv~a~~inp~~~~~~~~~~~~~~~p~~~G~~~~~~G~ 85 (348)
T PLN03154 6 VVENKQVILKNYIDGIPKETDMEVKLGNKIELKAPKGSGAFLVKNLYLSCDPYMRGRMRDFHDSYLPPFVPGQRIEGFGV 85 (348)
T ss_pred cccceEEEEecCCCCCCCcccEEEEeecccCCCCCCCCCeEEEEEEEEccCHHHHHhhhccCCCCCCCcCCCCeeEeeEE
Confidence 3344555553332 4466655 3555 457999999999999999987654432222235889998 88999
Q ss_pred EEEecCCCCCcccCCEEEEeccccCCCCCccccCCCCccccccccccccccCCCCccCCcceeeEEeecce--EEE--cC
Q 022313 75 VKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERY--CYK--IA 150 (299)
Q Consensus 75 V~~vG~~v~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~--~~~--~p 150 (299)
|..+|++++.|++||+|.. .|+|+||..++.+. +++ +|
T Consensus 86 v~~vg~~v~~~~~Gd~V~~--------------------------------------~~~~aey~~v~~~~~~~~~~~~P 127 (348)
T PLN03154 86 SKVVDSDDPNFKPGDLISG--------------------------------------ITGWEEYSLIRSSDNQLRKIQLQ 127 (348)
T ss_pred EEEEecCCCCCCCCCEEEe--------------------------------------cCCcEEEEEEeccccceEEccCc
Confidence 9999999999999999952 26799999998753 544 48
Q ss_pred CCCCcc-cccccchhhHHHHHHhhhccCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCE
Q 022313 151 NDYPLA-LAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADK 228 (299)
Q Consensus 151 ~~~~~~-~aa~~~~~~~ta~~al~~~~~~~~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~ 228 (299)
++++++ +++.+++++.|+|+++.....+++|++|||+|+ |++|++++|+|+..|++|+++++++++.+.+++++|+++
T Consensus 128 ~~~~~~~~aa~l~~~~~TA~~al~~~~~~~~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~lGa~~ 207 (348)
T PLN03154 128 DDIPLSYHLGLLGMAGFTAYAGFYEVCSPKKGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDE 207 (348)
T ss_pred CCCCHHHHHHHcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhcCCCE
Confidence 999986 688999999999999977667799999999998 999999999999999999999998888888754799999
Q ss_pred EEeCCCH----HHHHHh-cCCccEEEEcCCCchhHHHHHHhcccCcEEEEEcCC-C-ce-----eeChhhhhcCCeeeee
Q 022313 229 FVVSSDL----EQMKAL-GKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP-S-KV-----KFSPASLNIGNAPLFR 296 (299)
Q Consensus 229 v~~~~~~----~~~~~~-~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~-~-~~-----~~~~~~l~~~~~~~~g 296 (299)
++++++. +.+.+. .+++|++||++|+. .+..++++++++|+++.+|.. . .. .+++..++.|++++.|
T Consensus 208 vi~~~~~~~~~~~i~~~~~~gvD~v~d~vG~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g 286 (348)
T PLN03154 208 AFNYKEEPDLDAALKRYFPEGIDIYFDNVGGD-MLDAALLNMKIHGRIAVCGMVSLNSLSASQGIHNLYNLISKRIRMQG 286 (348)
T ss_pred EEECCCcccHHHHHHHHCCCCcEEEEECCCHH-HHHHHHHHhccCCEEEEECccccCCCCCCCCcccHHHHhhccceEEE
Confidence 9987642 223333 35799999999986 489999999999999999976 2 21 2356678899999998
Q ss_pred ec
Q 022313 297 FK 298 (299)
Q Consensus 297 ~~ 298 (299)
|.
T Consensus 287 ~~ 288 (348)
T PLN03154 287 FL 288 (348)
T ss_pred EE
Confidence 74
No 79
>cd05281 TDH Threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=100.00 E-value=9.9e-32 Score=242.31 Aligned_cols=274 Identities=24% Similarity=0.349 Sum_probs=215.6
Q ss_pred EEeeeCCCCcccceeeecCCCCCCcEEEEEceeecccchhhhhccCC---CCCCCCccccccccEEEEEecCCCCCcccC
Q 022313 12 GWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKH---GDSKYPLVPGHEIVGIVKEVGHNVSRFKVG 88 (299)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~D~~~~~g~~---~~~~~p~~lG~e~~G~V~~vG~~v~~~~~G 88 (299)
++.....+..+++.+.+.|.+.++|++||+.++++|+.|+..+.+.. .....|.++|+|++|+|+.+|+++..+++|
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~v~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~~G 82 (341)
T cd05281 3 AIVKTKAGPGAELVEVPVPKPGPGEVLIKVLAASICGTDVHIYEWDEWAQSRIKPPLIFGHEFAGEVVEVGEGVTRVKVG 82 (341)
T ss_pred ceEEecCCCceEEEeCCCCCCCCCeEEEEEEEEEEcccchHHHcCCCCccccCCCCcccccceEEEEEEECCCCCCCCCC
Confidence 45554444568899999999999999999999999999988754321 122356689999999999999999999999
Q ss_pred CEEEEeccccCCCCCccccCCCCccccccccccccccCCCCccCCcceeeEEeecceEEEcCCCCCcccccccchhhHHH
Q 022313 89 DHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITV 168 (299)
Q Consensus 89 d~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta 168 (299)
|+|...+.. +|+.|.+|..+.+++|.... +.+ ....|+|++|+.++.+.++++|++++++.+ .+...+.++
T Consensus 83 d~V~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~-----~~~~g~~~~~v~v~~~~~~~lP~~~~~~~a-~~~~~~~~a 153 (341)
T cd05281 83 DYVSAETHI-VCGKCYQCRTGNYHVCQNTK--ILG-----VDTDGCFAEYVVVPEENLWKNDKDIPPEIA-SIQEPLGNA 153 (341)
T ss_pred CEEEECCcc-CCCCChHHHCcCcccCcccc--eEe-----ccCCCcceEEEEechHHcEECcCCCCHHHh-hhhhHHHHH
Confidence 999876554 89999999999999997542 222 234689999999999999999999988544 566677888
Q ss_pred HHHhhhccCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCchHHHHHHHhcCCCEEEeCCCHHH--HHHh--cC
Q 022313 169 YTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKFVVSSDLEQ--MKAL--GK 243 (299)
Q Consensus 169 ~~al~~~~~~~~g~~vlI~G~g~~G~~a~~~a~~~g~-~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~--~~~~--~~ 243 (299)
++++. . ..+++++|+|.|+|.+|++++++|+..|. +|+++++++++...+ +++|.+++++.+..+. +.+. .+
T Consensus 154 ~~~~~-~-~~~~g~~vlV~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~ 230 (341)
T cd05281 154 VHTVL-A-GDVSGKSVLITGCGPIGLMAIAVAKAAGASLVIASDPNPYRLELA-KKMGADVVINPREEDVVEVKSVTDGT 230 (341)
T ss_pred HHHHH-h-cCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHH-HHhCcceeeCcccccHHHHHHHcCCC
Confidence 87765 2 33789999998889999999999999999 788887666666655 6899988887654322 3333 25
Q ss_pred CccEEEEcCCCchhHHHHHHhcccCcEEEEEcCC-CceeeChh-hhhcCCeeeeee
Q 022313 244 SLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP-SKVKFSPA-SLNIGNAPLFRF 297 (299)
Q Consensus 244 ~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~-~~~~~~~~-~l~~~~~~~~g~ 297 (299)
++|++||++|+......++++++++|+++.+|.. ....+++. .+..+++++.++
T Consensus 231 ~vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~ 286 (341)
T cd05281 231 GVDVVLEMSGNPKAIEQGLKALTPGGRVSILGLPPGPVDIDLNNLVIFKGLTVQGI 286 (341)
T ss_pred CCCEEEECCCCHHHHHHHHHHhccCCEEEEEccCCCCcccccchhhhccceEEEEE
Confidence 8999999999876688999999999999999876 33333333 366677777765
No 80
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=100.00 E-value=4.1e-32 Score=245.07 Aligned_cols=221 Identities=17% Similarity=0.147 Sum_probs=181.8
Q ss_pred CCcccceeeecCCCC-CCcEEEEEceeecccchhhhhc---cCCCCCCCCccccccccEEEEEecCCCCCcccCCEEEEe
Q 022313 19 SGVLSPYSFNRRAVG-SDDVSITITHCGVCYADVIWTR---NKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVG 94 (299)
Q Consensus 19 ~~~~~~~~~~~p~~~-~~evlv~v~~~~i~~~D~~~~~---g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~V~~~ 94 (299)
++.+++.+.+.|++. ++||||||+++++|+.|..... +.....++|.++|||++|+|+++|+++++|++||+|..
T Consensus 20 ~~~~~~~~~~~p~~~~~~evlV~v~a~gin~~d~~~~~~~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~- 98 (345)
T cd08293 20 AENFRVEECTLPDELNEGQVLVRTLYLSVDPYMRCRMNEDTGTDYLAPWQLSQVLDGGGVGVVEESKHQKFAVGDIVTS- 98 (345)
T ss_pred ccceEEEeccCCCCCCCCeEEEEEEEEecCHHHHhhcccccccccCCCccCCCceEeeEEEEEeccCCCCCCCCCEEEe-
Confidence 456778899999875 9999999999999998853332 11111345788999999999999999999999999962
Q ss_pred ccccCCCCCccccCCCCccccccccccccccCCCCccCCcceeeEEeecceEEEcCCCCCccc----ccccchhhHHHHH
Q 022313 95 TYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLAL----AAPLLCAGITVYT 170 (299)
Q Consensus 95 ~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~----aa~~~~~~~ta~~ 170 (299)
| .++|+||+.++++.++++|+++++.+ +++++.++.|+|+
T Consensus 99 -----~-------------------------------~~~~ae~~~v~~~~~~~iP~~~~~~~~~~~~a~~~~~~~ta~~ 142 (345)
T cd08293 99 -----F-------------------------------NWPWQTYAVLDGSSLEKVDPQLVDGHLSYFLGAVGLPGLTALI 142 (345)
T ss_pred -----c-------------------------------CCCceeEEEecHHHeEEcCccccccchhHHhhhcCcHHHHHHH
Confidence 1 15699999999999999999865432 4567778999999
Q ss_pred HhhhccCCCCC--CEEEEEcC-ChHHHHHHHHHHHCCC-eEEEEeCCchHHHHHHHhcCCCEEEeCCCHH---HHHHhc-
Q 022313 171 PMMRHKMNQPG--KSLGVIGL-GGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKFVVSSDLE---QMKALG- 242 (299)
Q Consensus 171 al~~~~~~~~g--~~vlI~G~-g~~G~~a~~~a~~~g~-~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~---~~~~~~- 242 (299)
++.....++++ ++|||+|+ |++|++++|+|+..|+ +|+++++++++.+.+++++|+++++++.+.+ .+.++.
T Consensus 143 al~~~~~~~~g~~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~~~ 222 (345)
T cd08293 143 GIQEKGHITPGANQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDAAINYKTDNVAERLRELCP 222 (345)
T ss_pred HHHHhccCCCCCCCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHCC
Confidence 98776666776 99999998 9999999999999999 8999999998888886569999999877533 233333
Q ss_pred CCccEEEEcCCCchhHHHHHHhcccCcEEEEEcCC
Q 022313 243 KSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP 277 (299)
Q Consensus 243 ~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~ 277 (299)
+++|++||++|+.. ...++++++++|+++.+|..
T Consensus 223 ~gvd~vid~~g~~~-~~~~~~~l~~~G~iv~~G~~ 256 (345)
T cd08293 223 EGVDVYFDNVGGEI-SDTVISQMNENSHIILCGQI 256 (345)
T ss_pred CCceEEEECCCcHH-HHHHHHHhccCCEEEEEeee
Confidence 68999999999976 79999999999999999854
No 81
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=100.00 E-value=6.6e-32 Score=243.18 Aligned_cols=241 Identities=21% Similarity=0.224 Sum_probs=197.4
Q ss_pred CCcccceeeec----CCCCCCcEEEEEceeecccchhhhhccCCCC-CCCCccccccc--cEEEEEecCCCCCcccCCEE
Q 022313 19 SGVLSPYSFNR----RAVGSDDVSITITHCGVCYADVIWTRNKHGD-SKYPLVPGHEI--VGIVKEVGHNVSRFKVGDHV 91 (299)
Q Consensus 19 ~~~~~~~~~~~----p~~~~~evlv~v~~~~i~~~D~~~~~g~~~~-~~~p~~lG~e~--~G~V~~vG~~v~~~~~Gd~V 91 (299)
++.|++.+.+. |+|+++||||||+++++|+.|.+.+.|.... ...|.++|++. .|.+..+|+.+..|++||+|
T Consensus 18 ~~~~~~~~~~~~~~~p~p~~~~vlv~v~~~~inp~d~~~~~g~~~~~~~~p~~~g~~~~g~~~~~~v~~~v~~~~vGd~V 97 (338)
T cd08295 18 ESDLELRTTKLTLKVPPGGSGDVLVKNLYLSCDPYMRGRMKGHDDSLYLPPFKPGEVITGYGVAKVVDSGNPDFKVGDLV 97 (338)
T ss_pred ccceEEEEecCCcCCCCCCCCeEEEEEEEEeeCHHHHHhhccCCccccCCCcCCCCeEeccEEEEEEecCCCCCCCCCEE
Confidence 45688888888 8899999999999999999999888775432 34578899754 45666678888899999999
Q ss_pred EEeccccCCCCCccccCCCCccccccccccccccCCCCccCCcceeeEEeec-ceEEEcC-CCCCcc-cccccchhhHHH
Q 022313 92 GVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHE-RYCYKIA-NDYPLA-LAAPLLCAGITV 168 (299)
Q Consensus 92 ~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~-~~~~~~p-~~~~~~-~aa~~~~~~~ta 168 (299)
.. .|+|+||+.+|+ ..++++| +++++. +++++++++.|+
T Consensus 98 ~~--------------------------------------~g~~aey~~v~~~~~~~~lp~~~~~~~~~aa~l~~~~~tA 139 (338)
T cd08295 98 WG--------------------------------------FTGWEEYSLIPRGQDLRKIDHTDVPLSYYLGLLGMPGLTA 139 (338)
T ss_pred Ee--------------------------------------cCCceeEEEecchhceeecCCCCCCHHHHHHhcccHHHHH
Confidence 52 268999999999 7999995 578886 788999999999
Q ss_pred HHHhhhccCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEEeCCCH-H---HHHHh-c
Q 022313 169 YTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDL-E---QMKAL-G 242 (299)
Q Consensus 169 ~~al~~~~~~~~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~-~---~~~~~-~ 242 (299)
|+++.....+++|++|||+|+ |++|++++|+|+..|++|+++++++++.+.+++++|+++++++.+. + .+.+. .
T Consensus 140 ~~~l~~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~i~~~~~ 219 (338)
T cd08295 140 YAGFYEVCKPKKGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKLGFDDAFNYKEEPDLDAALKRYFP 219 (338)
T ss_pred HHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCceeEEcCCcccHHHHHHHhCC
Confidence 999977777799999999998 9999999999999999999999999888888544999999986432 2 22332 3
Q ss_pred CCccEEEEcCCCchhHHHHHHhcccCcEEEEEcCC-C-ce-----eeChhhhhcCCeeeeeec
Q 022313 243 KSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP-S-KV-----KFSPASLNIGNAPLFRFK 298 (299)
Q Consensus 243 ~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~-~-~~-----~~~~~~l~~~~~~~~g~~ 298 (299)
+++|++||++|+.. +..++++++++|+++.+|.. . .. .+++..++.+++++.||.
T Consensus 220 ~gvd~v~d~~g~~~-~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~ 281 (338)
T cd08295 220 NGIDIYFDNVGGKM-LDAVLLNMNLHGRIAACGMISQYNLEWPEGVRNLLNIIYKRVKIQGFL 281 (338)
T ss_pred CCcEEEEECCCHHH-HHHHHHHhccCcEEEEecccccCCCCCCCCccCHHHHhhccceeeEEE
Confidence 68999999999854 89999999999999999976 2 11 134566778888888853
No 82
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family. The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro
Probab=100.00 E-value=1.2e-31 Score=232.89 Aligned_cols=250 Identities=30% Similarity=0.439 Sum_probs=210.4
Q ss_pred cEEEEEceeecccchhhhhccCCC-CCCCCccccccccEEEEEecCCCCCcccCCEEEEeccccCCCCCccccCCCCccc
Q 022313 36 DVSITITHCGVCYADVIWTRNKHG-DSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHC 114 (299)
Q Consensus 36 evlv~v~~~~i~~~D~~~~~g~~~-~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~ 114 (299)
||+|+|.++++|+.|++.+.|..+ ....|.++|||++|+|+++|+++..|++||+|...+. ..|+.|.+|.. .|
T Consensus 1 ~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~G~e~~G~v~~~G~~v~~~~~Gd~V~~~~~-~~~~~~~~~~~----~~ 75 (271)
T cd05188 1 EVLVRVEAAGLCGTDLHIRRGGYPPPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVLPN-LGCGTCELCRE----LC 75 (271)
T ss_pred CeEEEEEEEEecchhHHHHcCCCCcCCCCCcccccccEEEEEEECCCCCcCCCCCEEEEcCC-CCCCCCHHHHh----hC
Confidence 689999999999999998887664 3456788999999999999999999999999987655 48999999997 66
Q ss_pred cccccccccccCCCCccCCcceeeEEeecceEEEcCCCCCcccccccchhhHHHHHHhhhccCCCCCCEEEEEcCChHHH
Q 022313 115 ARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGH 194 (299)
Q Consensus 115 ~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~al~~~~~~~~g~~vlI~G~g~~G~ 194 (299)
+...+. +....|+|++|+.++.+.++++|+++++++++.+++++.++|+++.....++++++|||+|+|++|+
T Consensus 76 ~~~~~~-------~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~~G~ 148 (271)
T cd05188 76 PGGGIL-------GEGLDGGFAEYVVVPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVLKPGDTVLVLGAGGVGL 148 (271)
T ss_pred CCCCEe-------ccccCCcceEEEEechHHeEECCCCCCHHHhhHhcCHHHHHHHHHHhccCCCCCCEEEEECCCHHHH
Confidence 655432 3345799999999999999999999999999999999999999998888778999999999966999
Q ss_pred HHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEEeCCCHHHHHHh----cCCccEEEEcCCCchhHHHHHHhcccCcE
Q 022313 195 MAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKAL----GKSLDFIIDTASGDHPFDAYMSLLKVAGV 270 (299)
Q Consensus 195 ~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~----~~~~d~v~d~~g~~~~~~~~~~~l~~~G~ 270 (299)
+++++++..|.+|+++++++++.+.+ +++|.+++++..+.+....+ .+++|++++++++......++++++++|+
T Consensus 149 ~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~~l~~~G~ 227 (271)
T cd05188 149 LAAQLAKAAGARVIVTDRSDEKLELA-KELGADHVIDYKEEDLEEELRLTGGGGADVVIDAVGGPETLAQALRLLRPGGR 227 (271)
T ss_pred HHHHHHHHcCCeEEEEcCCHHHHHHH-HHhCCceeccCCcCCHHHHHHHhcCCCCCEEEECCCCHHHHHHHHHhcccCCE
Confidence 99999999999999999998888877 67888888876654333222 36899999999984458999999999999
Q ss_pred EEEEcCC-Cce-eeChhhhhcCCeeeeeec
Q 022313 271 YVLVGFP-SKV-KFSPASLNIGNAPLFRFK 298 (299)
Q Consensus 271 ~v~~g~~-~~~-~~~~~~l~~~~~~~~g~~ 298 (299)
++.+|.. ... ......++.+++++.|+.
T Consensus 228 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (271)
T cd05188 228 IVVVGGTSGGPPLDDLRRLLFKELTIIGST 257 (271)
T ss_pred EEEEccCCCCCCcccHHHHHhcceEEEEee
Confidence 9999987 222 223556788999998864
No 83
>cd08234 threonine_DH_like L-threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=100.00 E-value=2.5e-31 Score=238.74 Aligned_cols=274 Identities=27% Similarity=0.428 Sum_probs=223.8
Q ss_pred eEEeeeCCCCcccceeeecCCCCCCcEEEEEceeecccchhhhhccCCCCCCCCccccccccEEEEEecCCCCCcccCCE
Q 022313 11 LGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDH 90 (299)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~ 90 (299)
+++.+. .++.+++.+++.|++.++||+||++++++|+.|.....|.++. .+|.++|+|++|+|+.+|+++.++++||+
T Consensus 2 ~a~~~~-~~~~~~~~~~~~~~l~~~~v~v~v~~~~l~~~d~~~~~g~~~~-~~p~~~g~~~~G~v~~vG~~v~~~~~Gd~ 79 (334)
T cd08234 2 KALVYE-GPGELEVEEVPVPEPGPDEVLIKVAACGICGTDLHIYEGEFGA-APPLVPGHEFAGVVVAVGSKVTGFKVGDR 79 (334)
T ss_pred eeEEec-CCCceEEEeccCCCCCCCeEEEEEEEEeEchhhhHHhcCCCCC-CCCcccccceEEEEEEeCCCCCCCCCCCE
Confidence 355553 4567899999999999999999999999999999988886652 36788999999999999999999999999
Q ss_pred EEEeccccCCCCCccccCCCCccccccccccccccCCCCccCCcceeeEEeecceEEEcCCCCCcccccccchhhHHHHH
Q 022313 91 VGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYT 170 (299)
Q Consensus 91 V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~ 170 (299)
|...+.. .|+.|.+|..+++..|...... |....|+|++|+.++.+.++++|+++++.+++.+ ..+.++++
T Consensus 80 V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~a~~ 150 (334)
T cd08234 80 VAVDPNI-YCGECFYCRRGRPNLCENLTAV-------GVTRNGGFAEYVVVPAKQVYKIPDNLSFEEAALA-EPLSCAVH 150 (334)
T ss_pred EEEcCCc-CCCCCccccCcChhhCCCccee-------ccCCCCcceeEEEecHHHcEECcCCCCHHHHhhh-hHHHHHHH
Confidence 9765543 6999999988888877765311 1124689999999999999999999999988766 67788888
Q ss_pred HhhhccCCCCCCEEEEEcCChHHHHHHHHHHHCCCe-EEEEeCCchHHHHHHHhcCCCEEEeCCCHHHH--HHh-cCCcc
Q 022313 171 PMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLN-VTVLSTSTSKKEEALSLLGADKFVVSSDLEQM--KAL-GKSLD 246 (299)
Q Consensus 171 al~~~~~~~~g~~vlI~G~g~~G~~a~~~a~~~g~~-v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~--~~~-~~~~d 246 (299)
++ ....++++++|+|+|+|.+|.+++++|+..|++ ++++++++++.+.+ +++|.+.+++..+.+.. ... .+++|
T Consensus 151 ~l-~~~~~~~g~~vlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~vd 228 (334)
T cd08234 151 GL-DLLGIKPGDSVLVFGAGPIGLLLAQLLKLNGASRVTVAEPNEEKLELA-KKLGATETVDPSREDPEAQKEDNPYGFD 228 (334)
T ss_pred HH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHH-HHhCCeEEecCCCCCHHHHHHhcCCCCc
Confidence 88 445569999999998899999999999999997 88888888888877 68898888876643221 122 36799
Q ss_pred EEEEcCCCchhHHHHHHhcccCcEEEEEcCC---CceeeChhhhhcCCeeeeee
Q 022313 247 FIIDTASGDHPFDAYMSLLKVAGVYVLVGFP---SKVKFSPASLNIGNAPLFRF 297 (299)
Q Consensus 247 ~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~---~~~~~~~~~l~~~~~~~~g~ 297 (299)
+++|+++.......++++++++|+++.+|.. ...+++...++.+++++.++
T Consensus 229 ~v~~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (334)
T cd08234 229 VVIEATGVPKTLEQAIEYARRGGTVLVFGVYAPDARVSISPFEIFQKELTIIGS 282 (334)
T ss_pred EEEECCCChHHHHHHHHHHhcCCEEEEEecCCCCCCcccCHHHHHhCCcEEEEe
Confidence 9999998766688999999999999999876 24455566666678887765
No 84
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=100.00 E-value=6.3e-32 Score=242.03 Aligned_cols=235 Identities=16% Similarity=0.159 Sum_probs=192.8
Q ss_pred CCCcccceeeecCCCCCCcEEEEEceeecccchhhhhccCCCCCCCCccccccccEEEEEecCCCCCcccCCEEEEeccc
Q 022313 18 PSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYV 97 (299)
Q Consensus 18 ~~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~ 97 (299)
.++.+++.+.+.|+++++||||||+++++|+.+. .|.+.....|.++|.|++|+|+++|+ .|++||+|..
T Consensus 15 ~~~~l~~~~~~~p~~~~~evlv~v~a~~~n~~~~---~g~~~~~~~~~i~G~~~~g~v~~~~~---~~~~GdrV~~---- 84 (325)
T TIGR02825 15 TDSDFELKTVELPPLNNGEVLLEALFLSVDPYMR---VAAKRLKEGDTMMGQQVARVVESKNV---ALPKGTIVLA---- 84 (325)
T ss_pred CCCceEEEeccCCCCCCCcEEEEEEEEecCHHHh---cccCcCCCCCcEecceEEEEEEeCCC---CCCCCCEEEE----
Confidence 4677888999999999999999999999999654 34333234578999999999999874 5999999962
Q ss_pred cCCCCCccccCCCCccccccccccccccCCCCccCCcceeeEEeecceEEEc----CCCCCcccc-cccchhhHHHHHHh
Q 022313 98 NSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKI----ANDYPLALA-APLLCAGITVYTPM 172 (299)
Q Consensus 98 ~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~----p~~~~~~~a-a~~~~~~~ta~~al 172 (299)
.++|++|+.++.+.++++ |++++++++ +++++++.|+|+++
T Consensus 85 ----------------------------------~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~aaa~l~~~~~TA~~~l 130 (325)
T TIGR02825 85 ----------------------------------SPGWTSHSISDGKDLEKLLTEWPDTLPLSLALGTVGMPGLTAYFGL 130 (325)
T ss_pred ----------------------------------ecCceeeEEechhheEEccccccCCCCHHHHHHhcccHHHHHHHHH
Confidence 146899999998888777 899999987 68899999999998
Q ss_pred hhccCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEEeCCCHH----HHHHh-cCCcc
Q 022313 173 MRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLE----QMKAL-GKSLD 246 (299)
Q Consensus 173 ~~~~~~~~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~----~~~~~-~~~~d 246 (299)
.....+++|++|||+|+ |++|++++|+|+..|++|+++++++++.+.+ +++|+++++++++.+ .+... .+++|
T Consensus 131 ~~~~~~~~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~-~~lGa~~vi~~~~~~~~~~~~~~~~~~gvd 209 (325)
T TIGR02825 131 LEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYL-KKLGFDVAFNYKTVKSLEETLKKASPDGYD 209 (325)
T ss_pred HHHhCCCCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCCCEEEeccccccHHHHHHHhCCCCeE
Confidence 77777799999999996 9999999999999999999999998888888 689999999877532 22223 25799
Q ss_pred EEEEcCCCchhHHHHHHhcccCcEEEEEcCC-Cc---eee----ChhhhhcCCeeeeeec
Q 022313 247 FIIDTASGDHPFDAYMSLLKVAGVYVLVGFP-SK---VKF----SPASLNIGNAPLFRFK 298 (299)
Q Consensus 247 ~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~-~~---~~~----~~~~l~~~~~~~~g~~ 298 (299)
++||++|+.. +..++++++++|+++.+|.. .. ..+ ....+..+++++.+|.
T Consensus 210 vv~d~~G~~~-~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 268 (325)
T TIGR02825 210 CYFDNVGGEF-SNTVIGQMKKFGRIAICGAISTYNRTGPLPPGPPPEIVIYQELRMEGFI 268 (325)
T ss_pred EEEECCCHHH-HHHHHHHhCcCcEEEEecchhhcccCCCCCCCcchHHHhhhcceEeEEE
Confidence 9999999876 89999999999999999975 11 112 2345667888888764
No 85
>TIGR00692 tdh L-threonine 3-dehydrogenase. E. coli His-90 modulates substrate specificity and is believed part of the active site.
Probab=100.00 E-value=3.4e-31 Score=238.74 Aligned_cols=269 Identities=24% Similarity=0.333 Sum_probs=215.0
Q ss_pred CCCCcccceeeecCCCCCCcEEEEEceeecccchhhhhccCC---CCCCCCccccccccEEEEEecCCCCCcccCCEEEE
Q 022313 17 DPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKH---GDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGV 93 (299)
Q Consensus 17 ~~~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~D~~~~~g~~---~~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~V~~ 93 (299)
++...+++.+.+.|.+.++||+||+.++++|+.|...+.+.. ...+.|.++|+|++|+|+++|+++.+|++||+|..
T Consensus 6 ~~~~~~~l~~~~~p~~~~~ev~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~ 85 (340)
T TIGR00692 6 KPGYGAELTEVPVPEPGPGEVLIKVLATSICGTDVHIYNWDEWAQSRIKPPQVVGHEVAGEVVGIGPGVEGIKVGDYVSV 85 (340)
T ss_pred cCCCCcEEEECCCCCCCCCeEEEEEEEEEEcccCHHHHcCCCCCCCCCCCCcccccceEEEEEEECCCCCcCCCCCEEEE
Confidence 355668889999999999999999999999999988765431 12234668999999999999999999999999976
Q ss_pred eccccCCCCCccccCCCCccccccccccccccCCCCccCCcceeeEEeecceEEEcCCCCCcccccccchhhHHHHHHhh
Q 022313 94 GTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMM 173 (299)
Q Consensus 94 ~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~al~ 173 (299)
.+. +.|+.|..|..+.+..|+...+. +. ...|+|++|+.++++.++++|++++++.+ +++..+.++++++.
T Consensus 86 ~~~-~~~~~~~~~~~~~~~~~~~~~~~--~~-----~~~g~~~~~~~~~~~~~~~lp~~~~~~~a-~~~~~~~~a~~~~~ 156 (340)
T TIGR00692 86 ETH-IVCGKCYACRRGQYHVCQNTKIF--GV-----DTDGCFAEYAVVPAQNIWKNPKSIPPEYA-TIQEPLGNAVHTVL 156 (340)
T ss_pred CCc-CCCCCChhhhCcChhhCcCcceE--ee-----cCCCcceeEEEeehHHcEECcCCCChHhh-hhcchHHHHHHHHH
Confidence 554 48999999999999999986332 11 24589999999999999999999998654 56778888888762
Q ss_pred hccCCCCCCEEEEEcCChHHHHHHHHHHHCCCe-EEEEeCCchHHHHHHHhcCCCEEEeCCCHHH---HHHh--cCCccE
Q 022313 174 RHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLN-VTVLSTSTSKKEEALSLLGADKFVVSSDLEQ---MKAL--GKSLDF 247 (299)
Q Consensus 174 ~~~~~~~g~~vlI~G~g~~G~~a~~~a~~~g~~-v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~---~~~~--~~~~d~ 247 (299)
..++++++|+|.|+|++|++++|+|+..|++ |+++.+++++.+.+ +++|.+.+++....+. +.++ .+++|+
T Consensus 157 --~~~~~g~~vlI~~~g~vg~~a~~la~~~G~~~v~~~~~~~~~~~~~-~~~g~~~~v~~~~~~~~~~l~~~~~~~~~d~ 233 (340)
T TIGR00692 157 --AGPISGKSVLVTGAGPIGLMAIAVAKASGAYPVIVSDPNEYRLELA-KKMGATYVVNPFKEDVVKEVADLTDGEGVDV 233 (340)
T ss_pred --ccCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHH-HHhCCcEEEcccccCHHHHHHHhcCCCCCCE
Confidence 3347899999988899999999999999996 88886666666655 7899988887654332 3333 257999
Q ss_pred EEEcCCCchhHHHHHHhcccCcEEEEEcCC-CceeeChh-hhhcCCeeeeee
Q 022313 248 IIDTASGDHPFDAYMSLLKVAGVYVLVGFP-SKVKFSPA-SLNIGNAPLFRF 297 (299)
Q Consensus 248 v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~-~~~~~~~~-~l~~~~~~~~g~ 297 (299)
++|+.++.......+++++++|+++.+|.. ...++++. .++.+++++.++
T Consensus 234 vld~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~ 285 (340)
T TIGR00692 234 FLEMSGAPKALEQGLQAVTPGGRVSLLGLPPGKVTIDFTNKVIFKGLTIYGI 285 (340)
T ss_pred EEECCCCHHHHHHHHHhhcCCCEEEEEccCCCCcccchhhhhhhcceEEEEE
Confidence 999999766688999999999999999976 43444444 566788888765
No 86
>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.
Probab=100.00 E-value=2.8e-31 Score=238.64 Aligned_cols=244 Identities=21% Similarity=0.336 Sum_probs=200.1
Q ss_pred CCCCcccceeeecCCCCCCcEEEEEceeecccchhhhhccCCCCCCCCccccccccEEEEEecCCCCCcccCCEEEEecc
Q 022313 17 DPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTY 96 (299)
Q Consensus 17 ~~~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~V~~~~~ 96 (299)
+.++.++..+.|.|+++++||+|||+++++|+.|...+.+..+....|.++|+|++|+|+++|+++.+|++||+|....
T Consensus 12 ~~~~~~~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~- 90 (336)
T TIGR02817 12 TDPDALVDIDLPKPKPGGRDLLVEVKAISVNPVDTKVRARMAPEAGQPKILGWDAAGVVVAVGDEVTLFKPGDEVWYAG- 90 (336)
T ss_pred CCcccceecccCCCCCCCCEEEEEEEEEEcChHHHHHHcCCCCCCCCCcccceeeEEEEEEeCCCCCCCCCCCEEEEcC-
Confidence 3456788889999999999999999999999999988877654445678899999999999999999999999996311
Q ss_pred ccCCCCCccccCCCCccccccccccccccCCCCccCCcceeeEEeecceEEEcCCCCCcccccccchhhHHHHHHhhhcc
Q 022313 97 VNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHK 176 (299)
Q Consensus 97 ~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~al~~~~ 176 (299)
+....|+|++|+.++.+.++++|+++++++++.+++++.|+|+++....
T Consensus 91 -------------------------------~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~ 139 (336)
T TIGR02817 91 -------------------------------DIDRPGSNAEFHLVDERIVGHKPKSLSFAEAAALPLTSITAWELLFDRL 139 (336)
T ss_pred -------------------------------CCCCCCcccceEEEcHHHcccCCCCCCHHHHhhhhHHHHHHHHHHHHhc
Confidence 0013589999999999999999999999999999999999999987666
Q ss_pred CCCC-----CCEEEEEcC-ChHHHHHHHHHHHC-CCeEEEEeCCchHHHHHHHhcCCCEEEeCCCH--HHHHHhc-CCcc
Q 022313 177 MNQP-----GKSLGVIGL-GGLGHMAVKFGKAF-GLNVTVLSTSTSKKEEALSLLGADKFVVSSDL--EQMKALG-KSLD 246 (299)
Q Consensus 177 ~~~~-----g~~vlI~G~-g~~G~~a~~~a~~~-g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~--~~~~~~~-~~~d 246 (299)
.+++ +++|||+|+ |++|++++|+|+.. |++|+++++++++.+.+ +++|+++++++... ..+.+.. +++|
T Consensus 140 ~~~~~~~~~g~~vlV~ga~g~vg~~~~~~ak~~~G~~vi~~~~~~~~~~~l-~~~g~~~~~~~~~~~~~~i~~~~~~~vd 218 (336)
T TIGR02817 140 GINDPVAGDKRALLIIGGAGGVGSILIQLARQLTGLTVIATASRPESQEWV-LELGAHHVIDHSKPLKAQLEKLGLEAVS 218 (336)
T ss_pred CCCCCCCCCCCEEEEEcCCcHHHHHHHHHHHHhCCCEEEEEcCcHHHHHHH-HHcCCCEEEECCCCHHHHHHHhcCCCCC
Confidence 6566 999999987 99999999999998 99999999998888888 68999999875431 2233333 5799
Q ss_pred EEEEcCCCchhHHHHHHhcccCcEEEEEcCCCceeeChhhhhcCCeeee
Q 022313 247 FIIDTASGDHPFDAYMSLLKVAGVYVLVGFPSKVKFSPASLNIGNAPLF 295 (299)
Q Consensus 247 ~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~l~~~~~~~~ 295 (299)
+++|++++......++++++++|+++.++.. ..+++..+..+++++.
T Consensus 219 ~vl~~~~~~~~~~~~~~~l~~~G~~v~~~~~--~~~~~~~~~~~~~~~~ 265 (336)
T TIGR02817 219 YVFSLTHTDQHFKEIVELLAPQGRFALIDDP--AELDISPFKRKSISLH 265 (336)
T ss_pred EEEEcCCcHHHHHHHHHHhccCCEEEEEccc--ccccchhhhhcceEEE
Confidence 9999987656689999999999999988643 2334444444545544
No 87
>cd08290 ETR 2-enoyl thioester reductase (ETR). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f
Probab=100.00 E-value=2.7e-31 Score=239.31 Aligned_cols=252 Identities=23% Similarity=0.233 Sum_probs=207.5
Q ss_pred eEEeeeCCCC---cccceeeecCCCCC-CcEEEEEceeecccchhhhhccCCCCC-C----CCccccccccEEEEEecCC
Q 022313 11 LGWAARDPSG---VLSPYSFNRRAVGS-DDVSITITHCGVCYADVIWTRNKHGDS-K----YPLVPGHEIVGIVKEVGHN 81 (299)
Q Consensus 11 ~~~~~~~~~~---~~~~~~~~~p~~~~-~evlv~v~~~~i~~~D~~~~~g~~~~~-~----~p~~lG~e~~G~V~~vG~~ 81 (299)
+++.+...+. .+.+.+.+.|++.+ +||+||+.++++|++|...+.|..+.. . .|.++|||++|+|+++|++
T Consensus 2 ~a~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~v~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~ 81 (341)
T cd08290 2 KALVYTEHGEPKEVLQLESYEIPPPGPPNEVLVKMLAAPINPADINQIQGVYPIKPPTTPEPPAVGGNEGVGEVVKVGSG 81 (341)
T ss_pred ceEEEccCCCchhheEEeecCCCCCCCCCEEEEEEEecCCCHHHHHHhcCcCCCCCcccCCCCCCCCcceEEEEEEeCCC
Confidence 3445543433 37889999998887 999999999999999999887765421 2 5678999999999999999
Q ss_pred CCCcccCCEEEEeccccCCCCCccccCCCCccccccccccccccCCCCccCCcceeeEEeecceEEEcCCCCCccccccc
Q 022313 82 VSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPL 161 (299)
Q Consensus 82 v~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~ 161 (299)
+..|++||+|.... ...|+|++|+.++++.++++|+++++++++.+
T Consensus 82 v~~~~~Gd~V~~~~----------------------------------~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~ 127 (341)
T cd08290 82 VKSLKPGDWVIPLR----------------------------------PGLGTWRTHAVVPADDLIKVPNDVDPEQAATL 127 (341)
T ss_pred CCCCCCCCEEEecC----------------------------------CCCccchheEeccHHHeEeCCCCCCHHHHHHh
Confidence 99999999997421 02489999999999999999999999999999
Q ss_pred chhhHHHHHHhhhccCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCc----hHHHHHHHhcCCCEEEeCCCH-
Q 022313 162 LCAGITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTST----SKKEEALSLLGADKFVVSSDL- 235 (299)
Q Consensus 162 ~~~~~ta~~al~~~~~~~~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~----~~~~~~~~~~g~~~v~~~~~~- 235 (299)
++.+.|+|+++.....++++++|||+|+ |++|++++++|+..|++++++++++ ++.+.+ +++|++++++.+..
T Consensus 128 ~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~ 206 (341)
T cd08290 128 SVNPCTAYRLLEDFVKLQPGDWVIQNGANSAVGQAVIQLAKLLGIKTINVVRDRPDLEELKERL-KALGADHVLTEEELR 206 (341)
T ss_pred hccHHHHHHHHHhhcccCCCCEEEEccchhHHHHHHHHHHHHcCCeEEEEEcCCCcchhHHHHH-HhcCCCEEEeCcccc
Confidence 9999999999977667799999999987 9999999999999999999988876 556666 68999999877653
Q ss_pred --HH---HHHhc-CCccEEEEcCCCchhHHHHHHhcccCcEEEEEcCC--CceeeChhhhhcCCeeeeeec
Q 022313 236 --EQ---MKALG-KSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP--SKVKFSPASLNIGNAPLFRFK 298 (299)
Q Consensus 236 --~~---~~~~~-~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~--~~~~~~~~~l~~~~~~~~g~~ 298 (299)
.. +.... +++|+++|++|+.. ....+++++++|+++.+|.. ....+++..++.+++++.++.
T Consensus 207 ~~~~~~~i~~~~~~~~d~vld~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (341)
T cd08290 207 SLLATELLKSAPGGRPKLALNCVGGKS-ATELARLLSPGGTMVTYGGMSGQPVTVPTSLLIFKDITLRGFW 276 (341)
T ss_pred cccHHHHHHHHcCCCceEEEECcCcHh-HHHHHHHhCCCCEEEEEeccCCCCcccCHHHHhhCCceEEEEe
Confidence 22 22222 37999999999876 77899999999999999866 344566666778898888753
No 88
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=100.00 E-value=6.1e-31 Score=235.67 Aligned_cols=232 Identities=17% Similarity=0.189 Sum_probs=189.2
Q ss_pred CcccceeeecCCCCCCcEEEEEceeecccchhhhhccCCCCCCCCccccccccEEEEEecCCCCCcccCCEEEEeccccC
Q 022313 20 GVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNS 99 (299)
Q Consensus 20 ~~~~~~~~~~p~~~~~evlv~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~ 99 (299)
+.+++.+.+.|+|+++||+|||+++++|+.|.....+ ....|.++|+|++|+|++ .+..|++||+|..
T Consensus 19 ~~l~~~~~~~p~~~~~evlVkv~a~~in~~~~~~~~~---~~~~p~v~G~e~~G~V~~---~~~~~~~Gd~V~~------ 86 (329)
T cd08294 19 SDFELVEEELPPLKDGEVLCEALFLSVDPYMRPYSKR---LNEGDTMIGTQVAKVIES---KNSKFPVGTIVVA------ 86 (329)
T ss_pred cceEEEecCCCCCCCCcEEEEEEEEecCHHHhccccc---CCCCCcEecceEEEEEec---CCCCCCCCCEEEe------
Confidence 5578899999999999999999999999887542211 124588999999999996 4457999999962
Q ss_pred CCCCccccCCCCccccccccccccccCCCCccCCcceeeEEeecc---eEEEcCCCCCc-----ccccccchhhHHHHHH
Q 022313 100 CRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHER---YCYKIANDYPL-----ALAAPLLCAGITVYTP 171 (299)
Q Consensus 100 c~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~---~~~~~p~~~~~-----~~aa~~~~~~~ta~~a 171 (299)
.++|++|+.++.+ .++++|++++. ..++.+++++.|+|++
T Consensus 87 --------------------------------~~~~~~~~~~~~~~~~~~~~iP~~~~~~~~~~~~~a~~~~~~~ta~~a 134 (329)
T cd08294 87 --------------------------------SFGWRTHTVSDGKDQPDLYKLPADLPDDLPPSLALGVLGMPGLTAYFG 134 (329)
T ss_pred --------------------------------eCCeeeEEEECCccccceEECCccccccCChHHHHHhcccHHHHHHHH
Confidence 1468899999999 99999999882 2234678899999999
Q ss_pred hhhccCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEEeCCCHHH---HHHh-cCCcc
Q 022313 172 MMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQ---MKAL-GKSLD 246 (299)
Q Consensus 172 l~~~~~~~~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~---~~~~-~~~~d 246 (299)
+.....+++|++|||+|+ |++|++++|+|+..|++|+++++++++.+.+ +++|+++++++++.+. +.+. .+++|
T Consensus 135 l~~~~~~~~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l-~~~Ga~~vi~~~~~~~~~~v~~~~~~gvd 213 (329)
T cd08294 135 LLEICKPKAGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWL-KELGFDAVFNYKTVSLEEALKEAAPDGID 213 (329)
T ss_pred HHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCCCEEEeCCCccHHHHHHHHCCCCcE
Confidence 977777799999999986 9999999999999999999999999888888 5799999998876433 3333 36799
Q ss_pred EEEEcCCCchhHHHHHHhcccCcEEEEEcCC-C-c------eeeChhhhhcCCeeeeee
Q 022313 247 FIIDTASGDHPFDAYMSLLKVAGVYVLVGFP-S-K------VKFSPASLNIGNAPLFRF 297 (299)
Q Consensus 247 ~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~-~-~------~~~~~~~l~~~~~~~~g~ 297 (299)
++||++|+.. ...++++++++|+++.+|.. . . .......++.+++++.+|
T Consensus 214 ~vld~~g~~~-~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 271 (329)
T cd08294 214 CYFDNVGGEF-SSTVLSHMNDFGRVAVCGSISTYNDKEPKKGPYVQETIIFKQLKMEGF 271 (329)
T ss_pred EEEECCCHHH-HHHHHHhhccCCEEEEEcchhccCCCCCCcCcccHHHHhhhcceEEEE
Confidence 9999999855 89999999999999999864 1 1 122344567788888886
No 89
>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases. Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so
Probab=99.98 E-value=2e-30 Score=231.74 Aligned_cols=245 Identities=25% Similarity=0.329 Sum_probs=201.7
Q ss_pred CcccceeeecCCCCCCcEEEEEceeecccchhhhhccCCCC-CCCCccccccccEEEEEecCCCCCcccCCEEEEecccc
Q 022313 20 GVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGD-SKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVN 98 (299)
Q Consensus 20 ~~~~~~~~~~p~~~~~evlv~v~~~~i~~~D~~~~~g~~~~-~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~ 98 (299)
.++++.+.+.|.+.++||+||+.++++|++|...+.|..+. ...|.++|||++|+|+++ +++.|++||+|.....
T Consensus 13 ~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~--~~~~~~~Gd~V~~~~~-- 88 (325)
T cd05280 13 VSLFLRTLPLDDLPEGDVLIRVHYSSLNYKDALAATGNGGVTRNYPHTPGIDAAGTVVSS--DDPRFREGDEVLVTGY-- 88 (325)
T ss_pred CcceEEeCCCCCCCCCeEEEEEEEeecChHHHHHhcCCCCCCCCCCCccCcccEEEEEEe--CCCCCCCCCEEEEccc--
Confidence 37899999999999999999999999999999988876532 235778999999999999 4567999999974210
Q ss_pred CCCCCccccCCCCccccccccccccccCCCCccCCcceeeEEeecceEEEcCCCCCcccccccchhhHHHHHHhhhccCC
Q 022313 99 SCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMN 178 (299)
Q Consensus 99 ~c~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~al~~~~~~ 178 (299)
+ .|....|+|++|+.++++.++++|+++++++++.+++.+.++|.++......
T Consensus 89 ----------------------~-----~g~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~ 141 (325)
T cd05280 89 ----------------------D-----LGMNTDGGFAEYVRVPADWVVPLPEGLSLREAMILGTAGFTAALSVHRLEDN 141 (325)
T ss_pred ----------------------c-----cCCCCCceeEEEEEEchhhEEECCCCCCHHHHHhhHHHHHHHHHHHHHHhhc
Confidence 0 0222468999999999999999999999999999999999999988665432
Q ss_pred --C-CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEEeCCCHH--HHHHh-cCCccEEEEc
Q 022313 179 --Q-PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLE--QMKAL-GKSLDFIIDT 251 (299)
Q Consensus 179 --~-~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~--~~~~~-~~~~d~v~d~ 251 (299)
. ++++|+|+|+ |.+|++++++|+..|++|+++++++++.+.+ +++|++++++.++.. ..+.. .+++|+++|+
T Consensus 142 ~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~d~vi~~ 220 (325)
T cd05280 142 GQTPEDGPVLVTGATGGVGSIAVAILAKLGYTVVALTGKEEQADYL-KSLGASEVLDREDLLDESKKPLLKARWAGAIDT 220 (325)
T ss_pred cCCCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HhcCCcEEEcchhHHHHHHHHhcCCCccEEEEC
Confidence 4 4579999998 9999999999999999999999999988888 689999988766532 12222 3579999999
Q ss_pred CCCchhHHHHHHhcccCcEEEEEcCC--CceeeChhhhhcCCeeeeee
Q 022313 252 ASGDHPFDAYMSLLKVAGVYVLVGFP--SKVKFSPASLNIGNAPLFRF 297 (299)
Q Consensus 252 ~g~~~~~~~~~~~l~~~G~~v~~g~~--~~~~~~~~~l~~~~~~~~g~ 297 (299)
+++.. ...++++++++|+++.+|.. ....+++..++.+++++.+.
T Consensus 221 ~~~~~-~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~ 267 (325)
T cd05280 221 VGGDV-LANLLKQTKYGGVVASCGNAAGPELTTTVLPFILRGVSLLGI 267 (325)
T ss_pred CchHH-HHHHHHhhcCCCEEEEEecCCCCccccccchheeeeeEEEEE
Confidence 99865 99999999999999999977 33356666666788888874
No 90
>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases. yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH
Probab=99.98 E-value=2.3e-30 Score=231.67 Aligned_cols=244 Identities=25% Similarity=0.357 Sum_probs=198.2
Q ss_pred cccceeeecCCCCCCcEEEEEceeecccchhhhhccCC-CCCCCCccccccccEEEEEecCCCCCcccCCEEEEeccccC
Q 022313 21 VLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKH-GDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNS 99 (299)
Q Consensus 21 ~~~~~~~~~p~~~~~evlv~v~~~~i~~~D~~~~~g~~-~~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~ 99 (299)
.+++++.+.|.+.++||+||+.++++|++|.....+.. .....|.++|||++|+|+++| +.+|++||+|...+..
T Consensus 14 ~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~~~--~~~~~~Gd~V~~~~~~-- 89 (326)
T cd08289 14 SVSVKNLTLDDLPEGDVLIRVAYSSVNYKDGLASIPGGKIVKRYPFIPGIDLAGTVVESN--DPRFKPGDEVIVTSYD-- 89 (326)
T ss_pred eeEEEEccCCCCCCCeEEEEEEEEecChHHhhhhcCCccccCCCCcCcccceeEEEEEcC--CCCCCCCCEEEEcccc--
Confidence 57788999999999999999999999999986654221 122457889999999999964 5679999999753210
Q ss_pred CCCCccccCCCCccccccccccccccCCCCccCCcceeeEEeecceEEEcCCCCCcccccccchhhHHHHHHhhhcc---
Q 022313 100 CRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHK--- 176 (299)
Q Consensus 100 c~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~al~~~~--- 176 (299)
.|....|+|++|+.++++.++++|+++++++++.+++.+.|+|.++....
T Consensus 90 ---------------------------~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l~~~~~~~ 142 (326)
T cd08289 90 ---------------------------LGVSHHGGYSEYARVPAEWVVPLPKGLTLKEAMILGTAGFTAALSIHRLEENG 142 (326)
T ss_pred ---------------------------cCCCCCCcceeEEEEcHHHeEECCCCCCHHHHhhhhhHHHHHHHHHHHHHhcC
Confidence 02234699999999999999999999999999999999999998875432
Q ss_pred CCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEEeCCCH--HHHHHh-cCCccEEEEcC
Q 022313 177 MNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDL--EQMKAL-GKSLDFIIDTA 252 (299)
Q Consensus 177 ~~~~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~--~~~~~~-~~~~d~v~d~~ 252 (299)
...++++|+|+|+ |.+|++++++|+..|++|+++++++++.+.+ +++|++++++.++. +.+.+. .+++|+++|++
T Consensus 143 ~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~v~~~~~~~~~~~~~~~~~~~d~vld~~ 221 (326)
T cd08289 143 LTPEQGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADYL-KKLGAKEVIPREELQEESIKPLEKQRWAGAVDPV 221 (326)
T ss_pred CCCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHH-HHcCCCEEEcchhHHHHHHHhhccCCcCEEEECC
Confidence 2345789999998 9999999999999999999999999998888 68999888877653 222223 35799999999
Q ss_pred CCchhHHHHHHhcccCcEEEEEcCC--CceeeChhhhhcCCeeeeee
Q 022313 253 SGDHPFDAYMSLLKVAGVYVLVGFP--SKVKFSPASLNIGNAPLFRF 297 (299)
Q Consensus 253 g~~~~~~~~~~~l~~~G~~v~~g~~--~~~~~~~~~l~~~~~~~~g~ 297 (299)
|+.. ...++++++++|+++.+|.. ...++++..++.+++++.++
T Consensus 222 g~~~-~~~~~~~l~~~G~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~ 267 (326)
T cd08289 222 GGKT-LAYLLSTLQYGGSVAVSGLTGGGEVETTVFPFILRGVNLLGI 267 (326)
T ss_pred cHHH-HHHHHHHhhcCCEEEEEeecCCCCCCcchhhhhhccceEEEE
Confidence 9854 89999999999999999987 23445566777899998886
No 91
>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.98 E-value=4.3e-30 Score=230.45 Aligned_cols=264 Identities=25% Similarity=0.341 Sum_probs=214.3
Q ss_pred CCcccceeeecCCCCCCcEEEEEceeecccchhhhhccCCC-CCCCCccccccccEEEEEecCCCCCcccCCEEEEeccc
Q 022313 19 SGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG-DSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYV 97 (299)
Q Consensus 19 ~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~D~~~~~g~~~-~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~ 97 (299)
.+.+++.+.+.|.++++|++|++.++++|++|++...|.++ ....|.++|||++|+|+++|+.+.++++||+|......
T Consensus 12 ~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~~ 91 (336)
T cd08276 12 LDNLKLVEEPVPEPGPGEVLVRVHAVSLNYRDLLILNGRYPPPVKDPLIPLSDGAGEVVAVGEGVTRFKVGDRVVPTFFP 91 (336)
T ss_pred CcceEEEeccCCCCCCCeEEEEEEEEecCHHHHHHhcCCCCCCCCCCcccccceeEEEEEeCCCCcCCCCCCEEEEeccc
Confidence 36677888888888999999999999999999998877654 23467789999999999999999999999999764432
Q ss_pred cCCCCCccccCCCCccccccccccccccCCCCccCCcceeeEEeecceEEEcCCCCCcccccccchhhHHHHHHhhhccC
Q 022313 98 NSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKM 177 (299)
Q Consensus 98 ~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~al~~~~~ 177 (299)
.|+.+ .+..|... . ..|....|+|++|+.++.+.++++|+++++.+++.+.+.+.++|+++.....
T Consensus 92 -~~~~~------~~~~~~~~--~-----~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~~a~~~l~~~~~ 157 (336)
T cd08276 92 -NWLDG------PPTAEDEA--S-----ALGGPIDGVLAEYVVLPEEGLVRAPDHLSFEEAATLPCAGLTAWNALFGLGP 157 (336)
T ss_pred -ccccc------cccccccc--c-----ccccccCceeeeEEEecHHHeEECCCCCCHHHhhhhhHHHHHHHHHHHhhcC
Confidence 34332 22333221 1 1133457899999999999999999999999999999999999999887777
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEEeCCC-H---HHHHHhc--CCccEEEEc
Q 022313 178 NQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSD-L---EQMKALG--KSLDFIIDT 251 (299)
Q Consensus 178 ~~~g~~vlI~G~g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~-~---~~~~~~~--~~~d~v~d~ 251 (299)
++++++|+|+|+|++|++++++++..|++|+++++++++.+.+ +++|.+++++... . ..+.+.. +++|+++|+
T Consensus 158 ~~~g~~vli~g~g~~g~~~~~~a~~~G~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~ 236 (336)
T cd08276 158 LKPGDTVLVQGTGGVSLFALQFAKAAGARVIATSSSDEKLERA-KALGADHVINYRTTPDWGEEVLKLTGGRGVDHVVEV 236 (336)
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCCCEEEcCCcccCHHHHHHHHcCCCCCcEEEEC
Confidence 7999999999889999999999999999999999998888888 4689998887654 2 2233333 589999999
Q ss_pred CCCchhHHHHHHhcccCcEEEEEcCC--CceeeChhhhhcCCeeeeeec
Q 022313 252 ASGDHPFDAYMSLLKVAGVYVLVGFP--SKVKFSPASLNIGNAPLFRFK 298 (299)
Q Consensus 252 ~g~~~~~~~~~~~l~~~G~~v~~g~~--~~~~~~~~~l~~~~~~~~g~~ 298 (299)
+++.. ...++++++++|+++.+|.. ....++...++.+++++.++.
T Consensus 237 ~~~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (336)
T cd08276 237 GGPGT-LAQSIKAVAPGGVISLIGFLSGFEAPVLLLPLLTKGATLRGIA 284 (336)
T ss_pred CChHH-HHHHHHhhcCCCEEEEEccCCCCccCcCHHHHhhcceEEEEEe
Confidence 98765 88999999999999999987 233566677788999998763
No 92
>PTZ00354 alcohol dehydrogenase; Provisional
Probab=99.98 E-value=3.2e-30 Score=231.16 Aligned_cols=254 Identities=25% Similarity=0.348 Sum_probs=207.5
Q ss_pred cccceEEeeeCCCCcccceeeecCCCCCCcEEEEEceeecccchhhhhccCCC-CCCCCccccccccEEEEEecCCCCCc
Q 022313 7 SKDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG-DSKYPLVPGHEIVGIVKEVGHNVSRF 85 (299)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~D~~~~~g~~~-~~~~p~~lG~e~~G~V~~vG~~v~~~ 85 (299)
|||+..+.-.+....+++.+.+.|++.++||+|||.++++|+.|.....+.++ ....|.++|||++|+|+++|+++..+
T Consensus 1 ~m~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~ 80 (334)
T PTZ00354 1 MMRAVTLKGFGGVDVLKIGESPKPAPKRNDVLIKVSAAGVNRADTLQRQGKYPPPPGSSEILGLEVAGYVEDVGSDVKRF 80 (334)
T ss_pred CcEEEEEEecCCCcceEEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccceeeEEEEEEeCCCCCCC
Confidence 34544444333334566777778888999999999999999999888877553 23346689999999999999999999
Q ss_pred ccCCEEEEeccccCCCCCccccCCCCccccccccccccccCCCCccCCcceeeEEeecceEEEcCCCCCcccccccchhh
Q 022313 86 KVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAG 165 (299)
Q Consensus 86 ~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~ 165 (299)
++||+|... ...|+|++|+.++.+.++++|++++..+++.+.+++
T Consensus 81 ~~Gd~V~~~-----------------------------------~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~ 125 (334)
T PTZ00354 81 KEGDRVMAL-----------------------------------LPGGGYAEYAVAHKGHVMHIPQGYTFEEAAAIPEAF 125 (334)
T ss_pred CCCCEEEEe-----------------------------------cCCCceeeEEEecHHHcEeCCCCCCHHHHHHHHHHH
Confidence 999999631 124899999999999999999999999999999999
Q ss_pred HHHHHHhhhccCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEEeCCCHH-H---HHH
Q 022313 166 ITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLE-Q---MKA 240 (299)
Q Consensus 166 ~ta~~al~~~~~~~~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~-~---~~~ 240 (299)
.++|+++.....++++++|+|+|+ |.+|++++++|+..|++++++++++++.+.+ +++|.+++++....+ . +..
T Consensus 126 ~ta~~~l~~~~~~~~~~~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~ 204 (334)
T PTZ00354 126 LTAWQLLKKHGDVKKGQSVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEKVDFC-KKLAAIILIRYPDEEGFAPKVKK 204 (334)
T ss_pred HHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCCcEEEecCChhHHHHHHHH
Confidence 999999887767799999999996 9999999999999999988889888888888 679998888876543 2 222
Q ss_pred h--cCCccEEEEcCCCchhHHHHHHhcccCcEEEEEcCCC--cee-eChhhhhcCCeeeeee
Q 022313 241 L--GKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPS--KVK-FSPASLNIGNAPLFRF 297 (299)
Q Consensus 241 ~--~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~--~~~-~~~~~l~~~~~~~~g~ 297 (299)
. .+++|++++++++.. ...++++++++|+++.+|... ... +++..++.+++++.+.
T Consensus 205 ~~~~~~~d~~i~~~~~~~-~~~~~~~l~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (334)
T PTZ00354 205 LTGEKGVNLVLDCVGGSY-LSETAEVLAVDGKWIVYGFMGGAKVEKFNLLPLLRKRASIIFS 265 (334)
T ss_pred HhCCCCceEEEECCchHH-HHHHHHHhccCCeEEEEecCCCCcccccCHHHHHhhCCEEEee
Confidence 3 257999999998765 889999999999999999762 222 7777777777777763
No 93
>cd08244 MDR_enoyl_red Possible enoyl reductase. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr
Probab=99.97 E-value=5.5e-30 Score=228.81 Aligned_cols=244 Identities=23% Similarity=0.303 Sum_probs=201.8
Q ss_pred CCcccceeeecCCCCCCcEEEEEceeecccchhhhhccCCC---CCCCCccccccccEEEEEecCCCCCcccCCEEEEec
Q 022313 19 SGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG---DSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGT 95 (299)
Q Consensus 19 ~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~D~~~~~g~~~---~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~V~~~~ 95 (299)
+..+++.+.+.|.+.++||+|++.++++|++|++...|..+ ....|.++|||++|+|+++|+++..+++||+|....
T Consensus 12 ~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~ 91 (324)
T cd08244 12 PEVLVPEDVPDPVPGPGQVRIAVAAAGVHFVDTQLRSGWGPGPFPPELPYVPGGEVAGVVDAVGPGVDPAWLGRRVVAHT 91 (324)
T ss_pred ccceEEeccCCCCCCCCEEEEEEEEEeCCHHHHHHhCCCCCCCCCCCCCcCCccceEEEEEEeCCCCCCCCCCCEEEEcc
Confidence 34466667777778999999999999999999988877543 234567899999999999999999999999996421
Q ss_pred cccCCCCCccccCCCCccccccccccccccCCCCccCCcceeeEEeecceEEEcCCCCCcccccccchhhHHHHHHhhhc
Q 022313 96 YVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRH 175 (299)
Q Consensus 96 ~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~al~~~ 175 (299)
. ...|+|++|+.++++.++++|+++++.+++.+++.+.|+|.. ...
T Consensus 92 ~---------------------------------~~~g~~~~~~~v~~~~~~~lp~~~~~~~a~~~~~~~~ta~~~-~~~ 137 (324)
T cd08244 92 G---------------------------------RAGGGYAELAVADVDSLHPVPDGLDLEAAVAVVHDGRTALGL-LDL 137 (324)
T ss_pred C---------------------------------CCCceeeEEEEEchHHeEeCCCCCCHHHHhhhcchHHHHHHH-HHh
Confidence 0 125899999999999999999999999999999999999644 444
Q ss_pred cCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEEeCCCHHH---HHHhc--CCccEEE
Q 022313 176 KMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQ---MKALG--KSLDFII 249 (299)
Q Consensus 176 ~~~~~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~---~~~~~--~~~d~v~ 249 (299)
..++++++|+|+|+ |.+|++++++|+..|++|+++++++++.+.+ +++|++.+++..+.+. +.+.. +++|+++
T Consensus 138 ~~~~~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl 216 (324)
T cd08244 138 ATLTPGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALV-RALGADVAVDYTRPDWPDQVREALGGGGVTVVL 216 (324)
T ss_pred cCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHcCCCEEEecCCccHHHHHHHHcCCCCceEEE
Confidence 55699999999996 9999999999999999999999999888888 6899988887765433 22232 5799999
Q ss_pred EcCCCchhHHHHHHhcccCcEEEEEcCC--CceeeChhhhhcCCeeeeeec
Q 022313 250 DTASGDHPFDAYMSLLKVAGVYVLVGFP--SKVKFSPASLNIGNAPLFRFK 298 (299)
Q Consensus 250 d~~g~~~~~~~~~~~l~~~G~~v~~g~~--~~~~~~~~~l~~~~~~~~g~~ 298 (299)
|++|+.. ...++++++++|+++.+|.. ...++++..++.+++++.++.
T Consensus 217 ~~~g~~~-~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (324)
T cd08244 217 DGVGGAI-GRAALALLAPGGRFLTYGWASGEWTALDEDDARRRGVTVVGLL 266 (324)
T ss_pred ECCChHh-HHHHHHHhccCcEEEEEecCCCCCCccCHHHHhhCCcEEEEee
Confidence 9999886 78999999999999999987 333566666778898888763
No 94
>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family. This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.
Probab=99.97 E-value=6.5e-30 Score=228.55 Aligned_cols=246 Identities=24% Similarity=0.351 Sum_probs=201.9
Q ss_pred CCcccceeeecCCCCCCcEEEEEceeecccchhhhhccCCCC-CCCCccccccccEEEEEecCCCCCcccCCEEEEeccc
Q 022313 19 SGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGD-SKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYV 97 (299)
Q Consensus 19 ~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~D~~~~~g~~~~-~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~ 97 (299)
+..+++++++.|.+.++||+||++++++|++|++.+.|.+.. ...|.++|||++|+|+. .++..|++||+|...++.
T Consensus 11 ~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~--~~~~~~~~Gd~V~~~~~~ 88 (323)
T TIGR02823 11 KVSAQVETLDLSDLPEGDVLIKVAYSSLNYKDALAITGKGGVVRSYPMIPGIDAAGTVVS--SEDPRFREGDEVIVTGYG 88 (323)
T ss_pred CcceeEeecCCCCCCCCeEEEEEEEEEcCHHHHHHHcCCCCCCCCCCccceeeeEEEEEe--cCCCCCCCCCEEEEccCC
Confidence 346789999999999999999999999999999888776532 24578899999999998 556789999999753210
Q ss_pred cCCCCCccccCCCCccccccccccccccCCCCccCCcceeeEEeecceEEEcCCCCCcccccccchhhHHHHHHhhhccC
Q 022313 98 NSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKM 177 (299)
Q Consensus 98 ~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~al~~~~~ 177 (299)
.|....|++++|+.++++.++++|+++++.+++.+++.+.++|.+++....
T Consensus 89 -----------------------------~~~~~~g~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~~~~~~ 139 (323)
T TIGR02823 89 -----------------------------LGVSHDGGYSQYARVPADWLVPLPEGLSLREAMALGTAGFTAALSVMALER 139 (323)
T ss_pred -----------------------------CCCCCCccceEEEEEchhheEECCCCCCHHHhhhhhhhHHHHHHHHHHhhh
Confidence 012246899999999999999999999999999999999999887754332
Q ss_pred --CCCCC-EEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEEeCCCHHH-HHHh-cCCccEEEEc
Q 022313 178 --NQPGK-SLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQ-MKAL-GKSLDFIIDT 251 (299)
Q Consensus 178 --~~~g~-~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~-~~~~-~~~~d~v~d~ 251 (299)
+.+++ +|+|+|+ |.+|++++++|+..|++++++++++++.+.+ +++|++++++.++... +..+ .+++|+++|+
T Consensus 140 ~~~~~~~~~vlI~g~~g~vg~~~~~la~~~G~~vi~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~d~vld~ 218 (323)
T TIGR02823 140 NGLTPEDGPVLVTGATGGVGSLAVAILSKLGYEVVASTGKAEEEDYL-KELGASEVIDREDLSPPGKPLEKERWAGAVDT 218 (323)
T ss_pred cCCCCCCceEEEEcCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH-HhcCCcEEEccccHHHHHHHhcCCCceEEEEC
Confidence 58888 9999998 9999999999999999999998888888777 7899988887765432 3333 2469999999
Q ss_pred CCCchhHHHHHHhcccCcEEEEEcCC--CceeeChhhhhcCCeeeeee
Q 022313 252 ASGDHPFDAYMSLLKVAGVYVLVGFP--SKVKFSPASLNIGNAPLFRF 297 (299)
Q Consensus 252 ~g~~~~~~~~~~~l~~~G~~v~~g~~--~~~~~~~~~l~~~~~~~~g~ 297 (299)
+|+.. ...++++++++|+++.+|.. ...++++..++.+++++.++
T Consensus 219 ~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~ 265 (323)
T TIGR02823 219 VGGHT-LANVLAQLKYGGAVAACGLAGGPDLPTTVLPFILRGVSLLGI 265 (323)
T ss_pred ccHHH-HHHHHHHhCCCCEEEEEcccCCCCccccHHHHhhcceEEEEE
Confidence 99875 89999999999999999987 34445556676889998884
No 95
>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional
Probab=99.97 E-value=4e-30 Score=230.34 Aligned_cols=234 Identities=23% Similarity=0.326 Sum_probs=198.8
Q ss_pred ccceEEeeeCCCCcccceeeecCCCCCCcEEEEEceeecccchhhhhccCCCCCCCCccccccccEEEEEecCCCCCccc
Q 022313 8 KDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKV 87 (299)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~ 87 (299)
|+...+.-.+.++.+++.+++.|.+.++||+||+.++++|++|++...|.++....|.++|||++|+|+.+|+++.++++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~~ 81 (327)
T PRK10754 2 AKRIEFHKHGGPEVLQAVEFTPADPAENEVQVENKAIGINYIDTYIRSGLYPPPSLPSGLGTEAAGVVSKVGSGVKHIKV 81 (327)
T ss_pred ceEEEEeccCChhHeEEeeccCCCCCCCEEEEEEEEEEcCHHHhhhcCCCCCCCCCCCccCcceEEEEEEeCCCCCCCCC
Confidence 45555544444567889999999999999999999999999999888776654456778999999999999999999999
Q ss_pred CCEEEEeccccCCCCCccccCCCCccccccccccccccCCCCccCCcceeeEEeecceEEEcCCCCCcccccccchhhHH
Q 022313 88 GDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGIT 167 (299)
Q Consensus 88 Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~t 167 (299)
||+|.... ...|+|++|+.++.+.++++|+++++++++.+++.+.+
T Consensus 82 Gd~V~~~~----------------------------------~~~g~~~~~v~v~~~~~~~lp~~~~~~~~~~~~~~~~t 127 (327)
T PRK10754 82 GDRVVYAQ----------------------------------SALGAYSSVHNVPADKAAILPDAISFEQAAASFLKGLT 127 (327)
T ss_pred CCEEEECC----------------------------------CCCcceeeEEEcCHHHceeCCCCCCHHHHHHHHHHHHH
Confidence 99996310 12378999999999999999999999999999999999
Q ss_pred HHHHhhhccCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEEeCCCHHH---HHHh--
Q 022313 168 VYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQ---MKAL-- 241 (299)
Q Consensus 168 a~~al~~~~~~~~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~---~~~~-- 241 (299)
+|.++.....++++++|+|+|+ |.+|++++++|+..|++++.+++++++.+.+ +++|++++++.++.+. +.+.
T Consensus 128 a~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~lak~~G~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~ 206 (327)
T PRK10754 128 VYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGSAQKAQRA-KKAGAWQVINYREENIVERVKEITG 206 (327)
T ss_pred HHHHHHhhcCCCCCCEEEEEeCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHCCCCEEEcCCCCcHHHHHHHHcC
Confidence 9999877777799999999976 9999999999999999999999998888888 6899988887665332 3333
Q ss_pred cCCccEEEEcCCCchhHHHHHHhcccCcEEEEEcCC
Q 022313 242 GKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP 277 (299)
Q Consensus 242 ~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~ 277 (299)
.+++|+++|++++.. ...++++++++|+++.+|..
T Consensus 207 ~~~~d~vl~~~~~~~-~~~~~~~l~~~g~~v~~g~~ 241 (327)
T PRK10754 207 GKKVRVVYDSVGKDT-WEASLDCLQRRGLMVSFGNA 241 (327)
T ss_pred CCCeEEEEECCcHHH-HHHHHHHhccCCEEEEEccC
Confidence 257999999999865 88899999999999999876
No 96
>cd05282 ETR_like 2-enoyl thioester reductase-like. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman
Probab=99.97 E-value=1.3e-29 Score=226.28 Aligned_cols=240 Identities=23% Similarity=0.302 Sum_probs=204.9
Q ss_pred cccceeeecCCCCCCcEEEEEceeecccchhhhhccCCC-CCCCCccccccccEEEEEecCCCCCcccCCEEEEeccccC
Q 022313 21 VLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG-DSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNS 99 (299)
Q Consensus 21 ~~~~~~~~~p~~~~~evlv~v~~~~i~~~D~~~~~g~~~-~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~ 99 (299)
.+++++.+.|++.++||+||++++++|+.|...+.+.+. ....|.++|||++|+|+.+|+++..+++||+|...+
T Consensus 13 ~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~---- 88 (323)
T cd05282 13 VLELVSLPIPPPGPGEVLVRMLAAPINPSDLITISGAYGSRPPLPAVPGNEGVGVVVEVGSGVSGLLVGQRVLPLG---- 88 (323)
T ss_pred eEEeEeCCCCCCCCCeEEEEEEeccCCHHHHHHhcCcCCCCCCCCCcCCcceEEEEEEeCCCCCCCCCCCEEEEeC----
Confidence 567778888999999999999999999999988876653 234577899999999999999999999999997421
Q ss_pred CCCCccccCCCCccccccccccccccCCCCccCCcceeeEEeecceEEEcCCCCCcccccccchhhHHHHHHhhhccCCC
Q 022313 100 CRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQ 179 (299)
Q Consensus 100 c~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~al~~~~~~~ 179 (299)
..|+|++|+.++...++++|+++++.+++.+++.+.++|+++.....+.
T Consensus 89 -------------------------------~~g~~~~~~~~~~~~~~~lp~~~~~~~~a~~~~~~~ta~~~~~~~~~~~ 137 (323)
T cd05282 89 -------------------------------GEGTWQEYVVAPADDLIPVPDSISDEQAAMLYINPLTAWLMLTEYLKLP 137 (323)
T ss_pred -------------------------------CCCcceeEEecCHHHeEECCCCCCHHHHHHHhccHHHHHHHHHHhccCC
Confidence 1488999999999999999999999999999999999999987777779
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEEeCCCHHHHHH---h--cCCccEEEEcCC
Q 022313 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKA---L--GKSLDFIIDTAS 253 (299)
Q Consensus 180 ~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~---~--~~~~d~v~d~~g 253 (299)
++++|+|+|+ |.+|++++++|+.+|++++++++++++.+.+ +++|++++++..+...... . .+++|+++|++|
T Consensus 138 ~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~g 216 (323)
T cd05282 138 PGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVEEL-KALGADEVIDSSPEDLAQRVKEATGGAGARLALDAVG 216 (323)
T ss_pred CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecChHHHHHH-HhcCCCEEecccchhHHHHHHHHhcCCCceEEEECCC
Confidence 9999999987 8999999999999999999999999888888 6899999988776433332 2 257999999999
Q ss_pred CchhHHHHHHhcccCcEEEEEcCC-C-ceeeChhhhhcCCeeeeee
Q 022313 254 GDHPFDAYMSLLKVAGVYVLVGFP-S-KVKFSPASLNIGNAPLFRF 297 (299)
Q Consensus 254 ~~~~~~~~~~~l~~~G~~v~~g~~-~-~~~~~~~~l~~~~~~~~g~ 297 (299)
+.. ...++++++++|+++.+|.. . ...+++..+..+++++.++
T Consensus 217 ~~~-~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~ 261 (323)
T cd05282 217 GES-ATRLARSLRPGGTLVNYGLLSGEPVPFPRSVFIFKDITVRGF 261 (323)
T ss_pred CHH-HHHHHHhhCCCCEEEEEccCCCCCCCCCHHHHhhcCceEEEE
Confidence 976 77889999999999999887 3 3456666666688888775
No 97
>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members. Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=99.97 E-value=2.2e-29 Score=225.68 Aligned_cols=239 Identities=26% Similarity=0.349 Sum_probs=199.6
Q ss_pred CCcccceeeecCCCCCCcEEEEEceeecccchhhhhccCCC-CCCCCccccccccEEEEEecCCCCCcccCCEEEEeccc
Q 022313 19 SGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG-DSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYV 97 (299)
Q Consensus 19 ~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~D~~~~~g~~~-~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~ 97 (299)
++.+++++.+.|.+.++|++|||.++++|+.|++...|.+. ....|.++|||++|+|+.+|+++.++++||+|...
T Consensus 15 ~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~--- 91 (329)
T cd08250 15 REATSIVDVPVPLPGPGEVLVKNRFVGINASDINFTAGRYDPGVKPPFDCGFEGVGEVVAVGEGVTDFKVGDAVATM--- 91 (329)
T ss_pred ccCceEEecCCCCCCCCEEEEEEEEEecCHHHHHHHhCCCCCCCCCCcccCceeEEEEEEECCCCCCCCCCCEEEEe---
Confidence 56788999999999999999999999999999988877654 24578899999999999999999999999999641
Q ss_pred cCCCCCccccCCCCccccccccccccccCCCCccCCcceeeEEeecceEEEcCCCCCcccccccchhhHHHHHHhhhccC
Q 022313 98 NSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKM 177 (299)
Q Consensus 98 ~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~al~~~~~ 177 (299)
..|+|++|+.++.+.++++|++ ..+++.+++++.++|+++.....
T Consensus 92 ---------------------------------~~g~~~s~~~v~~~~~~~ip~~--~~~~a~l~~~~~ta~~~l~~~~~ 136 (329)
T cd08250 92 ---------------------------------SFGAFAEYQVVPARHAVPVPEL--KPEVLPLLVSGLTASIALEEVGE 136 (329)
T ss_pred ---------------------------------cCcceeEEEEechHHeEECCCC--cchhhhcccHHHHHHHHHHHhcC
Confidence 2489999999999999999997 35677899999999999987777
Q ss_pred CCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEEeCCCHHH---HHHh-cCCccEEEEcC
Q 022313 178 NQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQ---MKAL-GKSLDFIIDTA 252 (299)
Q Consensus 178 ~~~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~---~~~~-~~~~d~v~d~~ 252 (299)
++++++|+|+|+ |.+|++++++|+..|++|+++++++++.+.+ +++|.+.+++.++.+. +... .+++|+++|++
T Consensus 137 ~~~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~v~~~~~~~~~~~~~~~~~~~vd~v~~~~ 215 (329)
T cd08250 137 MKSGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFL-KSLGCDRPINYKTEDLGEVLKKEYPKGVDVVYESV 215 (329)
T ss_pred CCCCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHH-HHcCCceEEeCCCccHHHHHHHhcCCCCeEEEECC
Confidence 799999999996 9999999999999999999999988888888 6899888887665322 2222 36799999999
Q ss_pred CCchhHHHHHHhcccCcEEEEEcCC-Cc-----------eeeChhhhhcCCeeeeeec
Q 022313 253 SGDHPFDAYMSLLKVAGVYVLVGFP-SK-----------VKFSPASLNIGNAPLFRFK 298 (299)
Q Consensus 253 g~~~~~~~~~~~l~~~G~~v~~g~~-~~-----------~~~~~~~l~~~~~~~~g~~ 298 (299)
|+.. ...++++++++|+++.+|.. .. ..++ ...+.+++++.++.
T Consensus 216 g~~~-~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 271 (329)
T cd08250 216 GGEM-FDTCVDNLALKGRLIVIGFISGYQSGTGPSPVKGATLP-PKLLAKSASVRGFF 271 (329)
T ss_pred cHHH-HHHHHHHhccCCeEEEEecccCCcccCccccccccccc-HHHhhcCceEEEEE
Confidence 9854 89999999999999999876 21 1222 23466788887763
No 98
>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.97 E-value=1.3e-29 Score=224.74 Aligned_cols=233 Identities=23% Similarity=0.338 Sum_probs=196.5
Q ss_pred CCcccceeeecCCCCCCcEEEEEceeecccchhhhhccCCCCCCCCccccccccEEEEEecCCCCCcccCCEEEEecccc
Q 022313 19 SGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVN 98 (299)
Q Consensus 19 ~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~ 98 (299)
+..+++.+.+.|.+.++||+||+.++++|+.|.+...+. ..|.++|||++|+|+++|+++..|++||+|...
T Consensus 11 ~~~~~~~~~~~p~~~~~ev~v~v~~~~i~~~d~~~~~~~----~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~---- 82 (305)
T cd08270 11 PLRLRLGEVPDPQPAPHEALVRVAAISLNRGELKFAAER----PDGAVPGWDAAGVVERAAADGSGPAVGARVVGL---- 82 (305)
T ss_pred CceeEEEecCCCCCCCCEEEEEEEEEecCHHHHHhhccC----CCCCcccceeEEEEEEeCCCCCCCCCCCEEEEe----
Confidence 556777899999999999999999999999998876521 235689999999999999999999999999631
Q ss_pred CCCCCccccCCCCccccccccccccccCCCCccCCcceeeEEeecceEEEcCCCCCcccccccchhhHHHHHHhhhccCC
Q 022313 99 SCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMN 178 (299)
Q Consensus 99 ~c~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~al~~~~~~ 178 (299)
...|+|++|+.++.+.++++|+++++++++.+++.+.++|+++.....
T Consensus 83 -------------------------------~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~~~~~~~- 130 (305)
T cd08270 83 -------------------------------GAMGAWAELVAVPTGWLAVLPDGVSFAQAATLPVAGVTALRALRRGGP- 130 (305)
T ss_pred -------------------------------cCCcceeeEEEEchHHeEECCCCCCHHHHHHhHhHHHHHHHHHHHhCC-
Confidence 125899999999999999999999999999999999999999988776
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEEeCCCHHHHHHhcCCccEEEEcCCCchh
Q 022313 179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHP 257 (299)
Q Consensus 179 ~~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~v~d~~g~~~~ 257 (299)
.++++|+|+|+ |++|++++++++..|++++.+++++++.+.+ +++|++..++... . ...+++|+++|++|+..
T Consensus 131 ~~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~--~--~~~~~~d~vl~~~g~~~- 204 (305)
T cd08270 131 LLGRRVLVTGASGGVGRFAVQLAALAGAHVVAVVGSPARAEGL-RELGAAEVVVGGS--E--LSGAPVDLVVDSVGGPQ- 204 (305)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCCcEEEeccc--c--ccCCCceEEEECCCcHH-
Confidence 46999999998 9999999999999999999999988888888 5699876654332 1 11257999999999875
Q ss_pred HHHHHHhcccCcEEEEEcCC--CceeeChhhhhc--CCeeeeee
Q 022313 258 FDAYMSLLKVAGVYVLVGFP--SKVKFSPASLNI--GNAPLFRF 297 (299)
Q Consensus 258 ~~~~~~~l~~~G~~v~~g~~--~~~~~~~~~l~~--~~~~~~g~ 297 (299)
...++++++++|+++.+|.. ....+++..+.. ++.++.++
T Consensus 205 ~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (305)
T cd08270 205 LARALELLAPGGTVVSVGSSSGEPAVFNPAAFVGGGGGRRLYTF 248 (305)
T ss_pred HHHHHHHhcCCCEEEEEeccCCCcccccHHHHhcccccceEEEE
Confidence 89999999999999999976 345566666655 68888775
No 99
>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=99.97 E-value=2.8e-29 Score=223.52 Aligned_cols=245 Identities=24% Similarity=0.317 Sum_probs=198.5
Q ss_pred CcccceeeecCCCCCCcEEEEEceeecccchhhhhccCCCCCCCCccccccccEEEEEecCCCCCcccCCEEEEeccccC
Q 022313 20 GVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNS 99 (299)
Q Consensus 20 ~~~~~~~~~~p~~~~~evlv~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~ 99 (299)
..+++.+.+.|++.++||+||++++++|+.|++...+..+....|.++|||++|+|+++|. ..+++||+|......
T Consensus 13 ~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~vG~--~~~~~Gd~V~~~~~~-- 88 (320)
T cd08243 13 EVLKLREIPIPEPKPGWVLIRVKAFGLNRSEIFTRQGHSPSVKFPRVLGIEAVGEVEEAPG--GTFTPGQRVATAMGG-- 88 (320)
T ss_pred cceEEeecCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCccccceeEEEEEEecC--CCCCCCCEEEEecCC--
Confidence 3566677777888999999999999999999998887665455678899999999999995 579999999743110
Q ss_pred CCCCccccCCCCccccccccccccccCCCCccCCcceeeEEeecceEEEcCCCCCcccccccchhhHHHHHHhhhccCCC
Q 022313 100 CRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQ 179 (299)
Q Consensus 100 c~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~al~~~~~~~ 179 (299)
. +....|+|++|+.+++..++++|+++++++++.+++++.++|+++.....++
T Consensus 89 ------------------------~---~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~ 141 (320)
T cd08243 89 ------------------------M---GRTFDGSYAEYTLVPNEQVYAIDSDLSWAELAALPETYYTAWGSLFRSLGLQ 141 (320)
T ss_pred ------------------------C---CCCCCcccceEEEcCHHHcEeCCCCCCHHHHHhcchHHHHHHHHHHHhcCCC
Confidence 0 1124589999999999999999999999999999999999999998877779
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEEeCCC--HHHHHHhcCCccEEEEcCCCch
Q 022313 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSD--LEQMKALGKSLDFIIDTASGDH 256 (299)
Q Consensus 180 ~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~--~~~~~~~~~~~d~v~d~~g~~~ 256 (299)
++++|+|+|+ |.+|++++++|+..|++|+++++++++.+.+ +++|++++++... .+.+.+..+++|+++|++++..
T Consensus 142 ~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~i~~~~~~~d~vl~~~~~~~ 220 (320)
T cd08243 142 PGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAALL-KELGADEVVIDDGAIAEQLRAAPGGFDKVLELVGTAT 220 (320)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HhcCCcEEEecCccHHHHHHHhCCCceEEEECCChHH
Confidence 9999999998 9999999999999999999999998888888 6899988875432 1223333568999999999864
Q ss_pred hHHHHHHhcccCcEEEEEcCC-Cc---eeeChhhhh--cCCeeeeee
Q 022313 257 PFDAYMSLLKVAGVYVLVGFP-SK---VKFSPASLN--IGNAPLFRF 297 (299)
Q Consensus 257 ~~~~~~~~l~~~G~~v~~g~~-~~---~~~~~~~l~--~~~~~~~g~ 297 (299)
+..++++++++|+++.+|.. .. .......+. .+++++.++
T Consensus 221 -~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (320)
T cd08243 221 -LKDSLRHLRPGGIVCMTGLLGGQWTLEDFNPMDDIPSGVNLTLTGS 266 (320)
T ss_pred -HHHHHHHhccCCEEEEEccCCCCcccCCcchhhhhhhccceEEEec
Confidence 89999999999999999975 11 112223333 567777665
No 100
>cd08252 AL_MDR Arginate lyase and other MDR family members. This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil
Probab=99.97 E-value=5.2e-29 Score=223.78 Aligned_cols=241 Identities=25% Similarity=0.345 Sum_probs=199.0
Q ss_pred ccceeeecCCCCCCcEEEEEceeecccchhhhhccCCCCCCCCccccccccEEEEEecCCCCCcccCCEEEEeccccCCC
Q 022313 22 LSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCR 101 (299)
Q Consensus 22 ~~~~~~~~p~~~~~evlv~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~c~ 101 (299)
+...+++.|++.++||+|++.++++|++|++.+.+.++....|.++|||++|+|+++|+++..|++||+|.....
T Consensus 18 ~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~----- 92 (336)
T cd08252 18 LIDIELPKPVPGGRDLLVRVEAVSVNPVDTKVRAGGAPVPGQPKILGWDASGVVEAVGSEVTLFKVGDEVYYAGD----- 92 (336)
T ss_pred eeEccCCCCCCCCCEEEEEEEEEEcCHHHHHHHcCCCCCCCCCcccccceEEEEEEcCCCCCCCCCCCEEEEcCC-----
Confidence 566678888889999999999999999999887776543445778999999999999999999999999963100
Q ss_pred CCccccCCCCccccccccccccccCCCCccCCcceeeEEeecceEEEcCCCCCcccccccchhhHHHHHHhhhccCCCC-
Q 022313 102 DCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQP- 180 (299)
Q Consensus 102 ~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~al~~~~~~~~- 180 (299)
....|+|++|+.++.+.++++|+++++++++.+++.+.++|.++.....+.+
T Consensus 93 ---------------------------~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~ 145 (336)
T cd08252 93 ---------------------------ITRPGSNAEYQLVDERIVGHKPKSLSFAEAAALPLTSLTAWEALFDRLGISED 145 (336)
T ss_pred ---------------------------CCCCccceEEEEEchHHeeeCCCCCCHHHhhhhhhHHHHHHHHHHHhcCCCCC
Confidence 0135899999999999999999999999999999999999999866666566
Q ss_pred ----CCEEEEEcC-ChHHHHHHHHHHHCC-CeEEEEeCCchHHHHHHHhcCCCEEEeCCCH--HHHHHhc-CCccEEEEc
Q 022313 181 ----GKSLGVIGL-GGLGHMAVKFGKAFG-LNVTVLSTSTSKKEEALSLLGADKFVVSSDL--EQMKALG-KSLDFIIDT 251 (299)
Q Consensus 181 ----g~~vlI~G~-g~~G~~a~~~a~~~g-~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~--~~~~~~~-~~~d~v~d~ 251 (299)
+++|+|+|+ |++|++++++|+..| ++|+++++++++.+.+ +++|++++++..+. ..+.... +++|+++|+
T Consensus 146 ~~~~g~~vlV~g~~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~i~~~~~~~~d~vl~~ 224 (336)
T cd08252 146 AENEGKTLLIIGGAGGVGSIAIQLAKQLTGLTVIATASRPESIAWV-KELGADHVINHHQDLAEQLEALGIEPVDYIFCL 224 (336)
T ss_pred cCCCCCEEEEEcCCchHHHHHHHHHHHcCCcEEEEEcCChhhHHHH-HhcCCcEEEeCCccHHHHHHhhCCCCCCEEEEc
Confidence 999999986 999999999999999 8999999998888888 68999998877641 2222233 579999999
Q ss_pred CCCchhHHHHHHhcccCcEEEEEcCCCceeeChhhhhcCCeeeee
Q 022313 252 ASGDHPFDAYMSLLKVAGVYVLVGFPSKVKFSPASLNIGNAPLFR 296 (299)
Q Consensus 252 ~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~l~~~~~~~~g 296 (299)
+++......++++++++|+++.+|... ..++...+..+++++.+
T Consensus 225 ~~~~~~~~~~~~~l~~~g~~v~~g~~~-~~~~~~~~~~~~~~~~~ 268 (336)
T cd08252 225 TDTDQHWDAMAELIAPQGHICLIVDPQ-EPLDLGPLKSKSASFHW 268 (336)
T ss_pred cCcHHHHHHHHHHhcCCCEEEEecCCC-CcccchhhhcccceEEE
Confidence 997656899999999999999998662 33444455567777765
No 101
>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=99.97 E-value=4.7e-29 Score=221.65 Aligned_cols=239 Identities=21% Similarity=0.277 Sum_probs=195.9
Q ss_pred CCCcccceeeecCCCCCCcEEEEEceeecccchhhhh-ccCCCC--CCCCccccccccEEEEEecCCCCCcccCCEEEEe
Q 022313 18 PSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWT-RNKHGD--SKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVG 94 (299)
Q Consensus 18 ~~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~D~~~~-~g~~~~--~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~V~~~ 94 (299)
+++.+++.+++.|++.++||+||+.++++|++|.+.+ .|.... +..|.++|+|++|+|+.+|+++.++++||+|+..
T Consensus 3 ~~~~~~~~~~~~~~l~~~ev~v~v~~~~i~~~d~~~~~~g~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~ 82 (312)
T cd08269 3 GPGRFEVEEHPRPTPGPGQVLVRVEGCGVCGSDLPAFNQGRPWFVYPAEPGGPGHEGWGRVVALGPGVRGLAVGDRVAGL 82 (312)
T ss_pred CCCeeEEEECCCCCCCCCeEEEEEEEeeecccchHHHccCCCCcccCCCCcccceeeEEEEEEECCCCcCCCCCCEEEEe
Confidence 4567899999999999999999999999999998877 665421 2247789999999999999999999999999742
Q ss_pred ccccCCCCCccccCCCCccccccccccccccCCCCccCCcceeeEEeecceEEEcCCCCCcccccccc-hhhHHHHHHhh
Q 022313 95 TYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLL-CAGITVYTPMM 173 (299)
Q Consensus 95 ~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~ta~~al~ 173 (299)
..|+|++|+.++.+.++++|+++ .. +.++ .++.++++++.
T Consensus 83 ------------------------------------~~g~~~~~~~v~~~~~~~lP~~~--~~-~~~~~~~~~~a~~~~~ 123 (312)
T cd08269 83 ------------------------------------SGGAFAEYDLADADHAVPLPSLL--DG-QAFPGEPLGCALNVFR 123 (312)
T ss_pred ------------------------------------cCCcceeeEEEchhheEECCCch--hh-hHHhhhhHHHHHHHHH
Confidence 24889999999999999999988 22 2333 67888898887
Q ss_pred hccCCCCCCEEEEEcCChHHHHHHHHHHHCCCe-EEEEeCCchHHHHHHHhcCCCEEEeCCCHH---HHHHhc--CCccE
Q 022313 174 RHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLN-VTVLSTSTSKKEEALSLLGADKFVVSSDLE---QMKALG--KSLDF 247 (299)
Q Consensus 174 ~~~~~~~g~~vlI~G~g~~G~~a~~~a~~~g~~-v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~---~~~~~~--~~~d~ 247 (299)
...++++++|+|+|+|.+|++++++|+..|++ ++++.+++++.+.+ +++|++++++.+..+ .+.+.. .++|+
T Consensus 124 -~~~~~~~~~vlI~g~g~vg~~~~~la~~~g~~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~l~~~~~~~~vd~ 201 (312)
T cd08269 124 -RGWIRAGKTVAVIGAGFIGLLFLQLAAAAGARRVIAIDRRPARLALA-RELGATEVVTDDSEAIVERVRELTGGAGADV 201 (312)
T ss_pred -hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHH-HHhCCceEecCCCcCHHHHHHHHcCCCCCCE
Confidence 55569999999998899999999999999998 99988887777755 789998888765432 233332 57999
Q ss_pred EEEcCCCchhHHHHHHhcccCcEEEEEcCC--CceeeChhhhhcCCeeeeee
Q 022313 248 IIDTASGDHPFDAYMSLLKVAGVYVLVGFP--SKVKFSPASLNIGNAPLFRF 297 (299)
Q Consensus 248 v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~--~~~~~~~~~l~~~~~~~~g~ 297 (299)
++|+.|+......++++++++|+++.+|.. ....+++..+..+++++.++
T Consensus 202 vld~~g~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 253 (312)
T cd08269 202 VIEAVGHQWPLDLAGELVAERGRLVIFGYHQDGPRPVPFQTWNWKGIDLINA 253 (312)
T ss_pred EEECCCCHHHHHHHHHHhccCCEEEEEccCCCCCcccCHHHHhhcCCEEEEe
Confidence 999998776689999999999999999876 34555656667788887765
No 102
>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding
Probab=99.97 E-value=7.4e-29 Score=220.33 Aligned_cols=242 Identities=26% Similarity=0.353 Sum_probs=204.7
Q ss_pred CCcccceeeecCCCCCCcEEEEEceeecccchhhhhccCCC-CCCCCccccccccEEEEEecCCCCCcccCCEEEEeccc
Q 022313 19 SGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG-DSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYV 97 (299)
Q Consensus 19 ~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~D~~~~~g~~~-~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~ 97 (299)
++.+++.+.+.|.+.++|++||+.++++|++|++.+.+.+. ....|.++|||++|+|+++|+++..+++||+|...
T Consensus 12 ~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vg~~~~~~~~Gd~V~~~--- 88 (323)
T cd05276 12 PEVLELGEVPKPAPGPGEVLIRVAAAGVNRADLLQRQGLYPPPPGASDILGLEVAGVVVAVGPGVTGWKVGDRVCAL--- 88 (323)
T ss_pred cccceEEecCCCCCCCCEEEEEEEEeecCHHHHHHhCCCCCCCCCCCCcccceeEEEEEeeCCCCCCCCCCCEEEEe---
Confidence 45577778888888999999999999999999988876553 23457789999999999999999999999999631
Q ss_pred cCCCCCccccCCCCccccccccccccccCCCCccCCcceeeEEeecceEEEcCCCCCcccccccchhhHHHHHHhhhccC
Q 022313 98 NSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKM 177 (299)
Q Consensus 98 ~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~al~~~~~ 177 (299)
...|+|++|+.++.+.++++|+++++.+++.+..++.++|+++.....
T Consensus 89 --------------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~a~~~~~~~~~ 136 (323)
T cd05276 89 --------------------------------LAGGGYAEYVVVPAGQLLPVPEGLSLVEAAALPEVFFTAWQNLFQLGG 136 (323)
T ss_pred --------------------------------cCCCceeEEEEcCHHHhccCCCCCCHHHHhhchhHHHHHHHHHHHhcC
Confidence 124889999999999999999999999999999999999999877667
Q ss_pred CCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEEeCCCHHHHH---Hh--cCCccEEEEc
Q 022313 178 NQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMK---AL--GKSLDFIIDT 251 (299)
Q Consensus 178 ~~~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~---~~--~~~~d~v~d~ 251 (299)
+.++++++|+|+ |++|++++++++..|++++++++++++.+.+ +++|.+.+++....+... .. .+++|+++++
T Consensus 137 ~~~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~ 215 (323)
T cd05276 137 LKAGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEAC-RALGADVAINYRTEDFAEEVKEATGGRGVDVILDM 215 (323)
T ss_pred CCCCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHcCCCEEEeCCchhHHHHHHHHhCCCCeEEEEEC
Confidence 799999999997 8999999999999999999999988888888 678988888776543322 22 2579999999
Q ss_pred CCCchhHHHHHHhcccCcEEEEEcCC--CceeeChhhhhcCCeeeeee
Q 022313 252 ASGDHPFDAYMSLLKVAGVYVLVGFP--SKVKFSPASLNIGNAPLFRF 297 (299)
Q Consensus 252 ~g~~~~~~~~~~~l~~~G~~v~~g~~--~~~~~~~~~l~~~~~~~~g~ 297 (299)
+|+.. ....+++++++|+++.+|.. ....+++..++.+++++.++
T Consensus 216 ~g~~~-~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (323)
T cd05276 216 VGGDY-LARNLRALAPDGRLVLIGLLGGAKAELDLAPLLRKRLTLTGS 262 (323)
T ss_pred CchHH-HHHHHHhhccCCEEEEEecCCCCCCCCchHHHHHhCCeEEEe
Confidence 99877 88899999999999999876 33456666677788888775
No 103
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=99.97 E-value=1.4e-28 Score=218.88 Aligned_cols=248 Identities=22% Similarity=0.294 Sum_probs=205.3
Q ss_pred CCCcccceeeecCCCCCCcEEEEEceeecccchhhhhccCCC-CCCCCccccccccEEEEEecCCCCCcccCCEEEEecc
Q 022313 18 PSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG-DSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTY 96 (299)
Q Consensus 18 ~~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~D~~~~~g~~~-~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~V~~~~~ 96 (299)
.++.+++.+++.|.+.+++++|++.++++|++|+..+.|... ....|.++|||++|+|+.+|+++.+|++||+|...+.
T Consensus 11 ~~~~~~~~~~~~~~l~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~Gd~v~~~~~ 90 (325)
T cd08253 11 APDVLRLGDLPVPTPGPGEVLVRVHASGVNPVDTYIRAGAYPGLPPLPYVPGSDGAGVVEAVGEGVDGLKVGDRVWLTNL 90 (325)
T ss_pred CcccceeeecCCCCCCCCEEEEEEEEEecChhHhhhccCCCCCCCCCCeecccceEEEEEeeCCCCCCCCCCCEEEEecc
Confidence 345588889999999999999999999999999988877553 3456888999999999999999999999999975321
Q ss_pred ccCCCCCccccCCCCccccccccccccccCCCCccCCcceeeEEeecceEEEcCCCCCcccccccchhhHHHHHHhhhcc
Q 022313 97 VNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHK 176 (299)
Q Consensus 97 ~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~al~~~~ 176 (299)
+. ....|++++|+.++++.++++|+++++.+++.+++++.++|+++....
T Consensus 91 --------------------------~~----~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~~a~~~l~~~~ 140 (325)
T cd08253 91 --------------------------GW----GRRQGTAAEYVVVPADQLVPLPDGVSFEQGAALGIPALTAYRALFHRA 140 (325)
T ss_pred --------------------------cc----CCCCcceeeEEEecHHHcEeCCCCCCHHHHhhhhhHHHHHHHHHHHHh
Confidence 00 013588999999999999999999999999999999999999988766
Q ss_pred CCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEEeCCCHHH---HHHh--cCCccEEEE
Q 022313 177 MNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQ---MKAL--GKSLDFIID 250 (299)
Q Consensus 177 ~~~~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~---~~~~--~~~~d~v~d 250 (299)
.+.++++++|+|+ |++|++++++++..|++|+++++++++.+.+ +++|.+++++....+. +.+. .+++|++++
T Consensus 141 ~~~~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~ 219 (325)
T cd08253 141 GAKAGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELV-RQAGADAVFNYRAEDLADRILAATAGQGVDVIIE 219 (325)
T ss_pred CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCCCEEEeCCCcCHHHHHHHHcCCCceEEEEE
Confidence 7799999999997 9999999999999999999999998888888 5789888887665433 2232 258999999
Q ss_pred cCCCchhHHHHHHhcccCcEEEEEcCC-CceeeChhhhhcCCeeeeee
Q 022313 251 TASGDHPFDAYMSLLKVAGVYVLVGFP-SKVKFSPASLNIGNAPLFRF 297 (299)
Q Consensus 251 ~~g~~~~~~~~~~~l~~~G~~v~~g~~-~~~~~~~~~l~~~~~~~~g~ 297 (299)
++++.. ....+++++++|+++.+|.. ....+++..++.++.++.++
T Consensus 220 ~~~~~~-~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (325)
T cd08253 220 VLANVN-LAKDLDVLAPGGRIVVYGSGGLRGTIPINPLMAKEASIRGV 266 (325)
T ss_pred CCchHH-HHHHHHhhCCCCEEEEEeecCCcCCCChhHHHhcCceEEee
Confidence 999876 88889999999999999875 33445555555667666654
No 104
>cd08249 enoyl_reductase_like enoyl_reductase_like. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de
Probab=99.97 E-value=6.2e-29 Score=223.95 Aligned_cols=229 Identities=23% Similarity=0.290 Sum_probs=190.9
Q ss_pred CCcccceeeecCCCCCCcEEEEEceeecccchhhhhccCCCCCCCCccccccccEEEEEecCCCCCcccCCEEEEecccc
Q 022313 19 SGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVN 98 (299)
Q Consensus 19 ~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~ 98 (299)
++.+++.+++.|+++++||+|+++++++|++|++...+.. ....|.++|||++|+|+.+|+++..+++||+|...+..
T Consensus 11 ~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~-~~~~~~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~- 88 (339)
T cd08249 11 GGLLVVVDVPVPKPGPDEVLVKVKAVALNPVDWKHQDYGF-IPSYPAILGCDFAGTVVEVGSGVTRFKVGDRVAGFVHG- 88 (339)
T ss_pred CCcccccCCCCCCCCCCEEEEEEEEEEcCchheeeeeccc-ccCCCceeeeeeeEEEEEeCCCcCcCCCCCEEEEEecc-
Confidence 4778999999999999999999999999999988775543 12346789999999999999999999999999753221
Q ss_pred CCCCCccccCCCCccccccccccccccCCCCccCCcceeeEEeecceEEEcCCCCCcccccccchhhHHHHHHhhhccCC
Q 022313 99 SCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMN 178 (299)
Q Consensus 99 ~c~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~al~~~~~~ 178 (299)
.|+ +....|+|++|+.++.+.++++|+++++.+++.+++.+.++|+++.....+
T Consensus 89 ~~~--------------------------~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~ 142 (339)
T cd08249 89 GNP--------------------------NDPRNGAFQEYVVADADLTAKIPDNISFEEAATLPVGLVTAALALFQKLGL 142 (339)
T ss_pred ccC--------------------------CCCCCCcccceEEechhheEECCCCCCHHHceecchHHHHHHHHHhccccC
Confidence 000 123468999999999999999999999999999999999999998765433
Q ss_pred ----------CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEEeCCCHHH---HHHh-cC
Q 022313 179 ----------QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQ---MKAL-GK 243 (299)
Q Consensus 179 ----------~~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~---~~~~-~~ 243 (299)
.++++|+|+|+ |.+|++++++|+..|++++.+. ++++.+.+ +++|++++++.++.+. +.+. .+
T Consensus 143 ~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~a~~~G~~v~~~~-~~~~~~~~-~~~g~~~v~~~~~~~~~~~l~~~~~~ 220 (339)
T cd08249 143 PLPPPKPSPASKGKPVLIWGGSSSVGTLAIQLAKLAGYKVITTA-SPKNFDLV-KSLGADAVFDYHDPDVVEDIRAATGG 220 (339)
T ss_pred CCCCCCCCCCCCCCEEEEEcChhHHHHHHHHHHHHcCCeEEEEE-CcccHHHH-HhcCCCEEEECCCchHHHHHHHhcCC
Confidence 68999999997 8999999999999999998887 55777777 7899999988775433 3333 36
Q ss_pred CccEEEEcCCCchhHHHHHHhccc--CcEEEEEcCC
Q 022313 244 SLDFIIDTASGDHPFDAYMSLLKV--AGVYVLVGFP 277 (299)
Q Consensus 244 ~~d~v~d~~g~~~~~~~~~~~l~~--~G~~v~~g~~ 277 (299)
++|+++|++|++.....+++++++ +|+++.+|..
T Consensus 221 ~~d~vl~~~g~~~~~~~~~~~l~~~~~g~~v~~g~~ 256 (339)
T cd08249 221 KLRYALDCISTPESAQLCAEALGRSGGGKLVSLLPV 256 (339)
T ss_pred CeeEEEEeeccchHHHHHHHHHhccCCCEEEEecCC
Confidence 799999999984559999999999 9999999866
No 105
>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1. Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=99.97 E-value=1.2e-28 Score=222.82 Aligned_cols=221 Identities=27% Similarity=0.379 Sum_probs=186.2
Q ss_pred ccceeeecCCC-CCCcEEEEEceeecccchhhhhccCCC---------------CCCCCccccccccEEEEEecCCCCCc
Q 022313 22 LSPYSFNRRAV-GSDDVSITITHCGVCYADVIWTRNKHG---------------DSKYPLVPGHEIVGIVKEVGHNVSRF 85 (299)
Q Consensus 22 ~~~~~~~~p~~-~~~evlv~v~~~~i~~~D~~~~~g~~~---------------~~~~p~~lG~e~~G~V~~vG~~v~~~ 85 (299)
+++.+.+.|+| .++||+|+++++++|++|.+.+.|... ....|.++|||++|+|+++|+++.++
T Consensus 16 ~~~~~~~~p~~~~~~ev~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~G~e~~G~v~~vG~~v~~~ 95 (350)
T cd08248 16 LLLENARIPVIRKPNQVLIKVHAASVNPIDVLMRSGYGRTLLNKKRKPQSCKYSGIEFPLTLGRDCSGVVVDIGSGVKSF 95 (350)
T ss_pred eeecccCCCCCCCCCeEEEEEEEEecCchhHHHHcCCccchhhhhhccccccccCCCCCeeecceeEEEEEecCCCcccC
Confidence 78889999999 499999999999999999988876421 23557899999999999999999999
Q ss_pred ccCCEEEEeccccCCCCCccccCCCCccccccccccccccCCCCccCCcceeeEEeecceEEEcCCCCCcccccccchhh
Q 022313 86 KVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAG 165 (299)
Q Consensus 86 ~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~ 165 (299)
++||+|...+.. ...|+|++|+.++++.++++|+++++.+++.+++.+
T Consensus 96 ~~Gd~V~~~~~~--------------------------------~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~ 143 (350)
T cd08248 96 EIGDEVWGAVPP--------------------------------WSQGTHAEYVVVPENEVSKKPKNLSHEEAASLPYAG 143 (350)
T ss_pred CCCCEEEEecCC--------------------------------CCCccceeEEEecHHHeecCCCCCCHHHHhhchhHH
Confidence 999999743210 135899999999999999999999999999999999
Q ss_pred HHHHHHhhhccCCC----CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEEeCCCHHHHHH
Q 022313 166 ITVYTPMMRHKMNQ----PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKA 240 (299)
Q Consensus 166 ~ta~~al~~~~~~~----~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~ 240 (299)
.++|+++.....+. ++++|+|+|+ |++|++++++|+..|++|+++.++ ++.+.+ +++|.+++++..+.+...+
T Consensus 144 ~ta~~~l~~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~-~~~~~~-~~~g~~~~~~~~~~~~~~~ 221 (350)
T cd08248 144 LTAWSALVNVGGLNPKNAAGKRVLILGGSGGVGTFAIQLLKAWGAHVTTTCST-DAIPLV-KSLGADDVIDYNNEDFEEE 221 (350)
T ss_pred HHHHHHHHHhccCCCccCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCc-chHHHH-HHhCCceEEECCChhHHHH
Confidence 99999987766654 4999999996 999999999999999999888765 455544 7899988888776444433
Q ss_pred h--cCCccEEEEcCCCchhHHHHHHhcccCcEEEEEcCC
Q 022313 241 L--GKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP 277 (299)
Q Consensus 241 ~--~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~ 277 (299)
+ .+++|+++|++|+.. ...++++++++|+++.+|..
T Consensus 222 l~~~~~vd~vi~~~g~~~-~~~~~~~l~~~G~~v~~g~~ 259 (350)
T cd08248 222 LTERGKFDVILDTVGGDT-EKWALKLLKKGGTYVTLVSP 259 (350)
T ss_pred HHhcCCCCEEEECCChHH-HHHHHHHhccCCEEEEecCC
Confidence 3 267999999999884 99999999999999999855
No 106
>cd05286 QOR2 Quinone oxidoreductase (QOR). Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone
Probab=99.96 E-value=9.9e-28 Score=212.82 Aligned_cols=240 Identities=28% Similarity=0.360 Sum_probs=200.1
Q ss_pred CcccceeeecCCCCCCcEEEEEceeecccchhhhhccCCCCCCCCccccccccEEEEEecCCCCCcccCCEEEEeccccC
Q 022313 20 GVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNS 99 (299)
Q Consensus 20 ~~~~~~~~~~p~~~~~evlv~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~ 99 (299)
..+.+.+.+.|.+.++|++|+|.++++|+.|++...+.++. ..|.++|||++|+|+.+|+++.++++||+|....
T Consensus 12 ~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~~~~~~-~~~~~~g~e~~G~v~~~g~~~~~~~~G~~V~~~~---- 86 (320)
T cd05286 12 EVLEYEDVPVPEPGPGEVLVRNTAIGVNFIDTYFRSGLYPL-PLPFVLGVEGAGVVEAVGPGVTGFKVGDRVAYAG---- 86 (320)
T ss_pred cceEEeecCCCCCCCCEEEEEEEEeecCHHHHHHhcCCCCC-CCCccCCcceeEEEEEECCCCCCCCCCCEEEEec----
Confidence 34566677777789999999999999999999888776542 4567899999999999999999999999996310
Q ss_pred CCCCccccCCCCccccccccccccccCCCCccCCcceeeEEeecceEEEcCCCCCcccccccchhhHHHHHHhhhccCCC
Q 022313 100 CRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQ 179 (299)
Q Consensus 100 c~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~al~~~~~~~ 179 (299)
..|++++|+.++.+.++++|++++..+++.+...+.++|.++.....++
T Consensus 87 -------------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~~ 135 (320)
T cd05286 87 -------------------------------PPGAYAEYRVVPASRLVKLPDGISDETAAALLLQGLTAHYLLRETYPVK 135 (320)
T ss_pred -------------------------------CCCceeEEEEecHHHceeCCCCCCHHHHhhccchHHHHHHHHHHhcCCC
Confidence 1488999999999999999999999999999999999999987777779
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEEeCCCHHH---HHHhc--CCccEEEEcCC
Q 022313 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQ---MKALG--KSLDFIIDTAS 253 (299)
Q Consensus 180 ~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~---~~~~~--~~~d~v~d~~g 253 (299)
++++|+|+|+ |++|++++++++..|++|+++++++++.+.+ +++|++++++..+... +.+.. +++|+++++++
T Consensus 136 ~g~~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~~ 214 (320)
T cd05286 136 PGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEKAELA-RAAGADHVINYRDEDFVERVREITGGRGVDVVYDGVG 214 (320)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHCCCCEEEeCCchhHHHHHHHHcCCCCeeEEEECCC
Confidence 9999999996 9999999999999999999999988888888 6899988887765333 23332 57999999999
Q ss_pred CchhHHHHHHhcccCcEEEEEcCC--CceeeChhhhhcCCeeeeee
Q 022313 254 GDHPFDAYMSLLKVAGVYVLVGFP--SKVKFSPASLNIGNAPLFRF 297 (299)
Q Consensus 254 ~~~~~~~~~~~l~~~G~~v~~g~~--~~~~~~~~~l~~~~~~~~g~ 297 (299)
+.. ...++++++++|+++.+|.. ....+++..+..+++++.++
T Consensus 215 ~~~-~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~ 259 (320)
T cd05286 215 KDT-FEGSLDSLRPRGTLVSFGNASGPVPPFDLLRLSKGSLFLTRP 259 (320)
T ss_pred cHh-HHHHHHhhccCcEEEEEecCCCCCCccCHHHHHhcCcEEEEE
Confidence 864 88999999999999999977 22345555555777777653
No 107
>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases. Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal
Probab=99.96 E-value=1e-27 Score=214.36 Aligned_cols=245 Identities=21% Similarity=0.332 Sum_probs=198.0
Q ss_pred CcccceeeecCCCCCCcEEEEEceeecccchhhhhccCCC-CCCCCccccccccEEEEEecCCCCCcccCCEEEEecccc
Q 022313 20 GVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG-DSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVN 98 (299)
Q Consensus 20 ~~~~~~~~~~p~~~~~evlv~v~~~~i~~~D~~~~~g~~~-~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~ 98 (299)
+.+++++.+.|++.++||+|++.++++|++|...+.|.+. ....|.++|||++|+|++ +++.++++||+|.....
T Consensus 13 ~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~--~~~~~~~~Gd~V~~~~~-- 88 (324)
T cd08288 13 TSAELRELDESDLPEGDVTVEVHYSTLNYKDGLAITGKGGIVRTFPLVPGIDLAGTVVE--SSSPRFKPGDRVVLTGW-- 88 (324)
T ss_pred cceEEEECCCCCCCCCeEEEEEEEEecCHHHHHHhcCCccccCCCCCccccceEEEEEe--CCCCCCCCCCEEEECCc--
Confidence 3688999999999999999999999999999988877543 123577899999999999 67778999999974210
Q ss_pred CCCCCccccCCCCccccccccccccccCCCCccCCcceeeEEeecceEEEcCCCCCcccccccchhhHHHHHHhh---hc
Q 022313 99 SCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMM---RH 175 (299)
Q Consensus 99 ~c~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~al~---~~ 175 (299)
..+....|+|++|+.++.+.++++|+++++++++.++..+.+++.+++ ..
T Consensus 89 ---------------------------~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~~~~~~~~ 141 (324)
T cd08288 89 ---------------------------GVGERHWGGYAQRARVKADWLVPLPEGLSARQAMAIGTAGFTAMLCVMALEDH 141 (324)
T ss_pred ---------------------------cCCCCCCCcceeEEEEchHHeeeCCCCCCHHHHhhhhhHHHHHHHHHHHHhhc
Confidence 001123589999999999999999999999999999999999887764 33
Q ss_pred cCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEEeCCCHHH-HHHh-cCCccEEEEcC
Q 022313 176 KMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQ-MKAL-GKSLDFIIDTA 252 (299)
Q Consensus 176 ~~~~~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~-~~~~-~~~~d~v~d~~ 252 (299)
...+++++|+|+|+ |++|++++|+|+.+|+++++++.++++.+.+ +++|+++++++++... +..+ .+++|.++|++
T Consensus 142 ~~~~~~~~vlI~ga~g~vg~~~~~~A~~~G~~vi~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 220 (324)
T cd08288 142 GVTPGDGPVLVTGAAGGVGSVAVALLARLGYEVVASTGRPEEADYL-RSLGASEIIDRAELSEPGRPLQKERWAGAVDTV 220 (324)
T ss_pred CcCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHH-HhcCCCEEEEcchhhHhhhhhccCcccEEEECC
Confidence 44236789999998 9999999999999999999999999888888 7899999988765332 2223 34689999999
Q ss_pred CCchhHHHHHHhcccCcEEEEEcCC--CceeeChhhhhcCCeeeeee
Q 022313 253 SGDHPFDAYMSLLKVAGVYVLVGFP--SKVKFSPASLNIGNAPLFRF 297 (299)
Q Consensus 253 g~~~~~~~~~~~l~~~G~~v~~g~~--~~~~~~~~~l~~~~~~~~g~ 297 (299)
++.. ....+..++.+|+++.+|.. ...++++..++.+++++.|+
T Consensus 221 ~~~~-~~~~~~~~~~~g~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~ 266 (324)
T cd08288 221 GGHT-LANVLAQTRYGGAVAACGLAGGADLPTTVMPFILRGVTLLGI 266 (324)
T ss_pred cHHH-HHHHHHHhcCCCEEEEEEecCCCCCCcchhhhhccccEEEEE
Confidence 9854 77888999999999999976 23345555666788988885
No 108
>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]
Probab=99.96 E-value=2.4e-28 Score=218.12 Aligned_cols=222 Identities=26% Similarity=0.354 Sum_probs=179.9
Q ss_pred CCcccceeeecCCCCCCcEEEEEceeecccchhhhhccCCCCC----CCCccccccccEE---EEEec-CCCCCcccCCE
Q 022313 19 SGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDS----KYPLVPGHEIVGI---VKEVG-HNVSRFKVGDH 90 (299)
Q Consensus 19 ~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~D~~~~~g~~~~~----~~p~~lG~e~~G~---V~~vG-~~v~~~~~Gd~ 90 (299)
+......+.+.|.++++|++|++.++++|+.|+.++.|..... .+|.+++.++.|. +...| ..+..+..||.
T Consensus 17 ~~~~~~~~~~iP~~~~~~~~i~~~a~a~NpiD~~~~~g~~~~~~~~~~~p~ii~~~g~~~~~~~~~~g~~~~~~~~~g~~ 96 (347)
T KOG1198|consen 17 GEVLFSEEVPIPEPEDGEVLIKVVAVALNPIDLKIRNGYYSPIPLGREFPGIIGRDGSGVVGAVESVGDDVVGGWVHGDA 96 (347)
T ss_pred cceEEeecccCCCCCCCceEEEEEEeccChHHHHHHccCcCCCCCccCCCCccccccCCceeEEeccccccccceEeeeE
Confidence 3444568899999999999999999999999999998877633 3564444444444 33444 23344666665
Q ss_pred EEEeccccCCCCCccccCCCCccccccccccccccCCCCccCCcceeeEEeecceEEEcCCCCCcccccccchhhHHHHH
Q 022313 91 VGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYT 170 (299)
Q Consensus 91 V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~ 170 (299)
+. .....|+|+||.++|...++++|+++++++||.++.++.|||.
T Consensus 97 ~~-----------------------------------~~~~~g~~aey~v~p~~~~~~~P~~l~~~~aa~~p~~~~tA~~ 141 (347)
T KOG1198|consen 97 VV-----------------------------------AFLSSGGLAEYVVVPEKLLVKIPESLSFEEAAALPLAALTALS 141 (347)
T ss_pred Ee-----------------------------------eccCCCceeeEEEcchhhccCCCCccChhhhhcCchHHHHHHH
Confidence 53 1245699999999999999999999999999999999999999
Q ss_pred Hhhhcc------CCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEEeCCCHHHHHHh--
Q 022313 171 PMMRHK------MNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKAL-- 241 (299)
Q Consensus 171 al~~~~------~~~~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~-- 241 (299)
++.... .+++|++|||+|+ |++|++++|+|++.++..++++++++..+.+ +++|+++++++++++.+++.
T Consensus 142 al~~~~~~~~~~~~~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~l~-k~lGAd~vvdy~~~~~~e~~kk 220 (347)
T KOG1198|consen 142 ALFQLAPGKRSKKLSKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLELV-KKLGADEVVDYKDENVVELIKK 220 (347)
T ss_pred HHHhccccccccccCCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchHHHH-HHcCCcEeecCCCHHHHHHHHh
Confidence 999888 7799999999987 8999999999999998777788888888888 79999999999997665554
Q ss_pred --cCCccEEEEcCCCchhHHHHHHhcccCcEEEEEcCC
Q 022313 242 --GKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP 277 (299)
Q Consensus 242 --~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~ 277 (299)
.++||+||||+|+.. ......++..+|+...++..
T Consensus 221 ~~~~~~DvVlD~vg~~~-~~~~~~~l~~~g~~~~i~~~ 257 (347)
T KOG1198|consen 221 YTGKGVDVVLDCVGGST-LTKSLSCLLKGGGGAYIGLV 257 (347)
T ss_pred hcCCCccEEEECCCCCc-cccchhhhccCCceEEEEec
Confidence 358999999999985 77888888888865444433
No 109
>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family. Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.
Probab=99.96 E-value=3.5e-27 Score=210.06 Aligned_cols=243 Identities=26% Similarity=0.346 Sum_probs=202.1
Q ss_pred CCcccceeeecCCCCCCcEEEEEceeecccchhhhhccCCCC-CCCCccccccccEEEEEecCCCCCcccCCEEEEeccc
Q 022313 19 SGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGD-SKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYV 97 (299)
Q Consensus 19 ~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~D~~~~~g~~~~-~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~ 97 (299)
+..+++.+.+.|++.+++++|++.++++|++|+....+.+.. ...|.++|||++|+|+.+|+++.++++||+|...
T Consensus 12 ~~~~~~~~~~~~~l~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vg~~~~~~~~Gd~V~~~--- 88 (325)
T TIGR02824 12 PEVLVLVEVPLPVPKAGEVLIRVAAAGVNRPDLLQRAGKYPPPPGASDILGLEVAGEVVAVGEGVSRWKVGDRVCAL--- 88 (325)
T ss_pred cccceEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCCCccceeEEEEEEeCCCCCCCCCCCEEEEc---
Confidence 344566666667789999999999999999998887765532 2346789999999999999999999999999631
Q ss_pred cCCCCCccccCCCCccccccccccccccCCCCccCCcceeeEEeecceEEEcCCCCCcccccccchhhHHHHHHhhhccC
Q 022313 98 NSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKM 177 (299)
Q Consensus 98 ~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~al~~~~~ 177 (299)
...|++++|+.++...++++|+++++..++.++.++.++|+++.....
T Consensus 89 --------------------------------~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~~~~~~~ 136 (325)
T TIGR02824 89 --------------------------------VAGGGYAEYVAVPAGQVLPVPEGLSLVEAAALPETFFTVWSNLFQRGG 136 (325)
T ss_pred --------------------------------cCCCcceeEEEecHHHcEeCCCCCCHHHHHhhhHHHHHHHHHHHHhcC
Confidence 123889999999999999999999999999999999999999877777
Q ss_pred CCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEEeCCCHHHHH---Hhc--CCccEEEEc
Q 022313 178 NQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMK---ALG--KSLDFIIDT 251 (299)
Q Consensus 178 ~~~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~---~~~--~~~d~v~d~ 251 (299)
++++++++|+|+ |++|++++++++..|++++++.+++++.+.+ +++|.+.+++....+... ... +++|+++++
T Consensus 137 ~~~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~ 215 (325)
T TIGR02824 137 LKAGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCAAC-EALGADIAINYREEDFVEVVKAETGGKGVDVILDI 215 (325)
T ss_pred CCCCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCCcEEEecCchhHHHHHHHHcCCCCeEEEEEC
Confidence 799999999997 9999999999999999999999988888777 789988887766543322 222 479999999
Q ss_pred CCCchhHHHHHHhcccCcEEEEEcCC--CceeeChhhhhcCCeeeeeec
Q 022313 252 ASGDHPFDAYMSLLKVAGVYVLVGFP--SKVKFSPASLNIGNAPLFRFK 298 (299)
Q Consensus 252 ~g~~~~~~~~~~~l~~~G~~v~~g~~--~~~~~~~~~l~~~~~~~~g~~ 298 (299)
+++.. ...++++++++|+++.+|.. ....+++..++.|++++.++.
T Consensus 216 ~~~~~-~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (325)
T TIGR02824 216 VGGSY-LNRNIKALALDGRIVQIGFQGGRKAELDLGPLLAKRLTITGST 263 (325)
T ss_pred CchHH-HHHHHHhhccCcEEEEEecCCCCcCCCChHHHHhcCCEEEEEe
Confidence 99865 88899999999999999876 233667777778899888753
No 110
>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.96 E-value=3.6e-27 Score=210.22 Aligned_cols=247 Identities=23% Similarity=0.333 Sum_probs=202.4
Q ss_pred CCcccceeeecCCCCCCcEEEEEceeecccchhhhhccCCC-CCCCCccccccccEEEEEecCCCCCcccCCEEEEeccc
Q 022313 19 SGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG-DSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYV 97 (299)
Q Consensus 19 ~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~D~~~~~g~~~-~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~ 97 (299)
+..+++.+.+.|++.+++++|+|.++++|+.|.....+.+. ....|.++|||++|+|+.+|+++.+|++||+|...+..
T Consensus 12 ~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~~ 91 (328)
T cd08268 12 PEVLRIEELPVPAPGAGEVLIRVEAIGLNRADAMFRRGAYIEPPPLPARLGYEAAGVVEAVGAGVTGFAVGDRVSVIPAA 91 (328)
T ss_pred cceeEEeecCCCCCCCCeEEEEEEEEecChHHhheeccccCCCCCCCCCCCcceEEEEEeeCCCCCcCCCCCEEEecccc
Confidence 34566777788889999999999999999999888776543 22346789999999999999999999999999742210
Q ss_pred cCCCCCccccCCCCccccccccccccccCCCCccCCcceeeEEeecceEEEcCCCCCcccccccchhhHHHHHHhhhccC
Q 022313 98 NSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKM 177 (299)
Q Consensus 98 ~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~al~~~~~ 177 (299)
+....|++++|+.++.+.++++|+++++.+++.+++++.++|.++.....
T Consensus 92 ------------------------------~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~ 141 (328)
T cd08268 92 ------------------------------DLGQYGTYAEYALVPAAAVVKLPDGLSFVEAAALWMQYLTAYGALVELAG 141 (328)
T ss_pred ------------------------------ccCCCccceEEEEechHhcEeCCCCCCHHHHHHhhhHHHHHHHHHHHhcC
Confidence 11235889999999999999999999999999999999999999887777
Q ss_pred CCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEEeCCCHHH---HHHhc--CCccEEEEc
Q 022313 178 NQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQ---MKALG--KSLDFIIDT 251 (299)
Q Consensus 178 ~~~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~---~~~~~--~~~d~v~d~ 251 (299)
+.++++++|+|+ |.+|++++++++..|++++++++++++.+.+ +++|.+.+++.+.... +.+.. .++|+++++
T Consensus 142 ~~~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~ 220 (328)
T cd08268 142 LRPGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDAL-LALGAAHVIVTDEEDLVAEVLRITGGKGVDVVFDP 220 (328)
T ss_pred CCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHcCCCEEEecCCccHHHHHHHHhCCCCceEEEEC
Confidence 789999999997 9999999999999999999999998888887 6789888887665332 22222 479999999
Q ss_pred CCCchhHHHHHHhcccCcEEEEEcCC--CceeeChhhhhcCCeeeeee
Q 022313 252 ASGDHPFDAYMSLLKVAGVYVLVGFP--SKVKFSPASLNIGNAPLFRF 297 (299)
Q Consensus 252 ~g~~~~~~~~~~~l~~~G~~v~~g~~--~~~~~~~~~l~~~~~~~~g~ 297 (299)
.++.. ...++++++++|+++.+|.. ....++....+.+++++.++
T Consensus 221 ~~~~~-~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~ 267 (328)
T cd08268 221 VGGPQ-FAKLADALAPGGTLVVYGALSGEPTPFPLKAALKKSLTFRGY 267 (328)
T ss_pred CchHh-HHHHHHhhccCCEEEEEEeCCCCCCCCchHHHhhcCCEEEEE
Confidence 99965 88899999999999999876 23344544456778877765
No 111
>cd05288 PGDH Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino
Probab=99.96 E-value=3.6e-27 Score=211.21 Aligned_cols=238 Identities=20% Similarity=0.196 Sum_probs=192.5
Q ss_pred CCcccceeeecCCCCCCcEEEEEceeecccchhhhhccCCCC---CCCCccccccccEEEEEecCCCCCcccCCEEEEec
Q 022313 19 SGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGD---SKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGT 95 (299)
Q Consensus 19 ~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~D~~~~~g~~~~---~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~V~~~~ 95 (299)
++.+++++.+.|++.++||+||+.++++|+.|.....+.... ...+.++|+|++|+|+++|++ ++++||+|..
T Consensus 17 ~~~~~~~~~~~p~~~~~~v~Vkv~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~--~~~~Gd~V~~-- 92 (329)
T cd05288 17 PDDFELVEVPLPELKDGEVLVRTLYLSVDPYMRGWMSDAKSYSPPVQLGEPMRGGGVGEVVESRSP--DFKVGDLVSG-- 92 (329)
T ss_pred ccceeEEeccCCCCCCCeEEEEEEEEecCHHHhhhhccCcccCCCccCCCcccCceEEEEEecCCC--CCCCCCEEec--
Confidence 456888899999999999999999999999876555443211 112457899999999999964 7999999952
Q ss_pred cccCCCCCccccCCCCccccccccccccccCCCCccCCcceeeEEeec-ceEEEcCCCCC--cccccc-cchhhHHHHHH
Q 022313 96 YVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHE-RYCYKIANDYP--LALAAP-LLCAGITVYTP 171 (299)
Q Consensus 96 ~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~-~~~~~~p~~~~--~~~aa~-~~~~~~ta~~a 171 (299)
.++|++|+.++. +.++++|++++ +..++. +++++.++|++
T Consensus 93 ------------------------------------~~~~~~~~~v~~~~~~~~lP~~~~~~~~~~~~~l~~~~~ta~~~ 136 (329)
T cd05288 93 ------------------------------------FLGWQEYAVVDGASGLRKLDPSLGLPLSAYLGVLGMTGLTAYFG 136 (329)
T ss_pred ------------------------------------ccceEEEEEecchhhcEECCcccCCCHHHHHHhcccHHHHHHHH
Confidence 247999999999 99999999985 444544 88999999999
Q ss_pred hhhccCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEEeCCCHHHH---HHh-cCCcc
Q 022313 172 MMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQM---KAL-GKSLD 246 (299)
Q Consensus 172 l~~~~~~~~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~---~~~-~~~~d 246 (299)
+.....+.++++|||+|+ |.+|++++++|+..|++|+++++++++.+.+++.+|++++++.++.+.. .+. .+++|
T Consensus 137 l~~~~~~~~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~v~~~~~~~~d 216 (329)
T cd05288 137 LTEIGKPKPGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEELGFDAAINYKTPDLAEALKEAAPDGID 216 (329)
T ss_pred HHhccCCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhhcCCceEEecCChhHHHHHHHhccCCce
Confidence 877777789999999996 9999999999999999999999998888888544999999887764332 222 36799
Q ss_pred EEEEcCCCchhHHHHHHhcccCcEEEEEcCC-C-ce-----eeChhhhhcCCeeeeee
Q 022313 247 FIIDTASGDHPFDAYMSLLKVAGVYVLVGFP-S-KV-----KFSPASLNIGNAPLFRF 297 (299)
Q Consensus 247 ~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~-~-~~-----~~~~~~l~~~~~~~~g~ 297 (299)
+++|++|+.. +..++++++++|+++.+|.. . .. .++...++.+++++.++
T Consensus 217 ~vi~~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (329)
T cd05288 217 VYFDNVGGEI-LDAALTLLNKGGRIALCGAISQYNATEPPGPKNLGNIITKRLTMQGF 273 (329)
T ss_pred EEEEcchHHH-HHHHHHhcCCCceEEEEeeccCcccccccccccHHHHhhCcceEEee
Confidence 9999999864 99999999999999999876 2 11 13455677888888875
No 112
>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]
Probab=99.96 E-value=1.3e-27 Score=201.83 Aligned_cols=237 Identities=18% Similarity=0.163 Sum_probs=193.8
Q ss_pred CCcccceeeecCCCCCCcEEEEEceeecccchhhhhccCCC---CCCCCccccccccEEEEEec--CCCCCcccCCEEEE
Q 022313 19 SGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG---DSKYPLVPGHEIVGIVKEVG--HNVSRFKVGDHVGV 93 (299)
Q Consensus 19 ~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~D~~~~~g~~~---~~~~p~~lG~e~~G~V~~vG--~~v~~~~~Gd~V~~ 93 (299)
+++|++++.++|+|+++|||+|..|.++++. ++|+.. .--.|+-+|-..+|.++... +....|++||.|.
T Consensus 24 ~d~F~lee~~vp~p~~GqvLl~~~ylS~DPy----mRgrm~d~~SY~~P~~lG~~~~gg~V~~Vv~S~~~~f~~GD~V~- 98 (340)
T COG2130 24 PDDFRLEEVDVPEPGEGQVLLRTLYLSLDPY----MRGRMSDAPSYAPPVELGEVMVGGTVAKVVASNHPGFQPGDIVV- 98 (340)
T ss_pred CCCceeEeccCCCCCcCceEEEEEEeccCHH----HeecccCCcccCCCcCCCceeECCeeEEEEecCCCCCCCCCEEE-
Confidence 4669999999999999999999999999873 333332 22346777777766665544 4567799999995
Q ss_pred eccccCCCCCccccCCCCccccccccccccccCCCCccCCcceeeEEeecceEEEcCCCCCccc--ccccchhhHHHHHH
Q 022313 94 GTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLAL--AAPLLCAGITVYTP 171 (299)
Q Consensus 94 ~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~--aa~~~~~~~ta~~a 171 (299)
...+|++|..++.+.+.++.+..-+.. ...+..+..|||.+
T Consensus 99 -------------------------------------~~~GWq~y~i~~~~~l~Kvd~~~~pl~~~LgvLGmpG~TAY~g 141 (340)
T COG2130 99 -------------------------------------GVSGWQEYAISDGEGLRKLDPSPAPLSAYLGVLGMPGLTAYFG 141 (340)
T ss_pred -------------------------------------ecccceEEEeechhhceecCCCCCCcchHHhhcCCchHHHHHH
Confidence 235899999999999999976532222 34677789999999
Q ss_pred hhhccCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEEeCCCHHHHHHh----cCCcc
Q 022313 172 MMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKAL----GKSLD 246 (299)
Q Consensus 172 l~~~~~~~~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~----~~~~d 246 (299)
|...+..++|++|+|.++ |++|..+.|+|+..|++|+.+..++++.+.+.+.+|.|.++|+++++..+.+ .+++|
T Consensus 142 Ll~igqpk~GetvvVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~~lGfD~~idyk~~d~~~~L~~a~P~GID 221 (340)
T COG2130 142 LLDIGQPKAGETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEELGFDAGIDYKAEDFAQALKEACPKGID 221 (340)
T ss_pred HHHhcCCCCCCEEEEEecccccchHHHHHHHhhCCeEEEecCCHHHHHHHHHhcCCceeeecCcccHHHHHHHHCCCCeE
Confidence 999999999999999987 9999999999999999999999999999999877999999999987544433 38999
Q ss_pred EEEEcCCCchhHHHHHHhcccCcEEEEEcCC-Cc----e---eeChhhhhcCCeeeeeec
Q 022313 247 FIIDTASGDHPFDAYMSLLKVAGVYVLVGFP-SK----V---KFSPASLNIGNAPLFRFK 298 (299)
Q Consensus 247 ~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~-~~----~---~~~~~~l~~~~~~~~g~~ 298 (299)
+.||++|+.- +.+++..|+.++|+..+|.. +. . +-....++.|+++++||.
T Consensus 222 vyfeNVGg~v-~DAv~~~ln~~aRi~~CG~IS~YN~~~~~~gp~~l~~l~~kr~~v~Gfi 280 (340)
T COG2130 222 VYFENVGGEV-LDAVLPLLNLFARIPVCGAISQYNAPELPPGPRRLPLLMAKRLRVQGFI 280 (340)
T ss_pred EEEEcCCchH-HHHHHHhhccccceeeeeehhhcCCCCCCCCcchhhHHHhhhheeEEEE
Confidence 9999999986 99999999999999999988 11 1 122346778899999994
No 113
>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.96 E-value=6.4e-27 Score=208.57 Aligned_cols=243 Identities=27% Similarity=0.366 Sum_probs=195.5
Q ss_pred CcccceeeecCCCCCCcEEEEEceeecccchhhhhccCCC-CCCCCccccccccEEEEEecCCCCCcccCCEEEEecccc
Q 022313 20 GVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG-DSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVN 98 (299)
Q Consensus 20 ~~~~~~~~~~p~~~~~evlv~v~~~~i~~~D~~~~~g~~~-~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~ 98 (299)
+.+++++.+.|++.++||+|+++++++|++|.....+... ....|.++|||++|+|+.+|+++.+|++||+|.....
T Consensus 13 ~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~-- 90 (326)
T cd08272 13 EVFELREVPRPQPGPGQVLVRVHASGVNPLDTKIRRGGAAARPPLPAILGCDVAGVVEAVGEGVTRFRVGDEVYGCAG-- 90 (326)
T ss_pred hheEEeecCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCCEEEEccC--
Confidence 3477778888889999999999999999999988776543 2335778999999999999999999999999963210
Q ss_pred CCCCCccccCCCCccccccccccccccCCCCccCCcceeeEEeecceEEEcCCCCCcccccccchhhHHHHHHhhhccCC
Q 022313 99 SCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMN 178 (299)
Q Consensus 99 ~c~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~al~~~~~~ 178 (299)
+.. ...|++++|+.++.+.++++|+++++..++.++..+.++|+++.....+
T Consensus 91 ------------------------~~~----~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~ 142 (326)
T cd08272 91 ------------------------GLG----GLQGSLAEYAVVDARLLALKPANLSMREAAALPLVGITAWEGLVDRAAV 142 (326)
T ss_pred ------------------------CcC----CCCCceeEEEEecHHHcccCCCCCCHHHHHHhHHHHHHHHHHHHHhcCC
Confidence 000 1358899999999999999999999999999999999999998777777
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEEeCCCH--HHHHHhc--CCccEEEEcCC
Q 022313 179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDL--EQMKALG--KSLDFIIDTAS 253 (299)
Q Consensus 179 ~~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~--~~~~~~~--~~~d~v~d~~g 253 (299)
+++++++|+|+ |.+|++++++++..|++|++++++ ++.+.+ +++|.+.+++.... ..+.+.. +++|+++|+++
T Consensus 143 ~~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~-~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~~~ 220 (326)
T cd08272 143 QAGQTVLIHGGAGGVGHVAVQLAKAAGARVYATASS-EKAAFA-RSLGADPIIYYRETVVEYVAEHTGGRGFDVVFDTVG 220 (326)
T ss_pred CCCCEEEEEcCCCcHHHHHHHHHHHcCCEEEEEech-HHHHHH-HHcCCCEEEecchhHHHHHHHhcCCCCCcEEEECCC
Confidence 99999999986 999999999999999999999987 777777 67999888876643 1222222 47999999999
Q ss_pred CchhHHHHHHhcccCcEEEEEcCCCceeeChhhhhcCCeeeeee
Q 022313 254 GDHPFDAYMSLLKVAGVYVLVGFPSKVKFSPASLNIGNAPLFRF 297 (299)
Q Consensus 254 ~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~l~~~~~~~~g~ 297 (299)
+.. ...++++++++|+++.+|... +.++..+..+++++.++
T Consensus 221 ~~~-~~~~~~~l~~~g~~v~~~~~~--~~~~~~~~~~~~~~~~~ 261 (326)
T cd08272 221 GET-LDASFEAVALYGRVVSILGGA--THDLAPLSFRNATYSGV 261 (326)
T ss_pred hHH-HHHHHHHhccCCEEEEEecCC--ccchhhHhhhcceEEEE
Confidence 865 888999999999999997653 22333333566665543
No 114
>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.96 E-value=5.8e-27 Score=209.97 Aligned_cols=221 Identities=24% Similarity=0.362 Sum_probs=187.4
Q ss_pred CCCcccceeeecCCCCCCcEEEEEceeecccchhhhhccCCCC-CCCCccccccccEEEEEecCCCCCcccCCEEEEecc
Q 022313 18 PSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGD-SKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTY 96 (299)
Q Consensus 18 ~~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~D~~~~~g~~~~-~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~V~~~~~ 96 (299)
.+..+++.+.+.|.+.++||+|++.++++|++|...+.|.... ..+|.++|||++|+|+.+|+++..|++||+|...+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~- 89 (331)
T cd08273 11 GPEVLKVVEADLPEPAAGEVVVKVEASGVSFADVQMRRGLYPDQPPLPFTPGYDLVGRVDALGSGVTGFEVGDRVAALT- 89 (331)
T ss_pred CcccEEEeccCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceEEEEEEeCCCCccCCCCCEEEEeC-
Confidence 3456888899999999999999999999999999888776542 34677899999999999999999999999997421
Q ss_pred ccCCCCCccccCCCCccccccccccccccCCCCccCCcceeeEEeecceEEEcCCCCCcccccccchhhHHHHHHhhhcc
Q 022313 97 VNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHK 176 (299)
Q Consensus 97 ~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~al~~~~ 176 (299)
..|+|++|+.++.+.++++|+++++.+++.+++++.++|+++....
T Consensus 90 ----------------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l~~~~ 135 (331)
T cd08273 90 ----------------------------------RVGGNAEYINLDAKYLVPVPEGVDAAEAVCLVLNYVTAYQMLHRAA 135 (331)
T ss_pred ----------------------------------CCcceeeEEEechHHeEECCCCCCHHHHHhhhhHHHHHHHHHHHhc
Confidence 1388999999999999999999999999999999999999987776
Q ss_pred CCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEEeCCCHHHHH-Hh-cCCccEEEEcCC
Q 022313 177 MNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMK-AL-GKSLDFIIDTAS 253 (299)
Q Consensus 177 ~~~~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~-~~-~~~~d~v~d~~g 253 (299)
.+.++++|+|+|+ |++|++++++|+..|++|++++. +++.+.+ +++|++.+ +....+... .. .+++|+++++++
T Consensus 136 ~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~~v~~~~~-~~~~~~~-~~~g~~~~-~~~~~~~~~~~~~~~~~d~vl~~~~ 212 (331)
T cd08273 136 KVLTGQRVLIHGASGGVGQALLELALLAGAEVYGTAS-ERNHAAL-RELGATPI-DYRTKDWLPAMLTPGGVDVVFDGVG 212 (331)
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEeC-HHHHHHH-HHcCCeEE-cCCCcchhhhhccCCCceEEEECCc
Confidence 7799999999997 99999999999999999999987 6666666 67886544 333221111 12 367999999999
Q ss_pred CchhHHHHHHhcccCcEEEEEcCC
Q 022313 254 GDHPFDAYMSLLKVAGVYVLVGFP 277 (299)
Q Consensus 254 ~~~~~~~~~~~l~~~G~~v~~g~~ 277 (299)
+.. ...++++++++|+++.+|..
T Consensus 213 ~~~-~~~~~~~l~~~g~~v~~g~~ 235 (331)
T cd08273 213 GES-YEESYAALAPGGTLVCYGGN 235 (331)
T ss_pred hHH-HHHHHHHhcCCCEEEEEccC
Confidence 987 88999999999999999877
No 115
>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.96 E-value=1.4e-26 Score=206.48 Aligned_cols=232 Identities=27% Similarity=0.426 Sum_probs=192.3
Q ss_pred eEEeeeCCC--CcccceeeecCCCCCCcEEEEEceeecccchhhhhccCCCCCCCCccccccccEEEEEecCCCCCcccC
Q 022313 11 LGWAARDPS--GVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVG 88 (299)
Q Consensus 11 ~~~~~~~~~--~~~~~~~~~~p~~~~~evlv~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~G 88 (299)
+++.+.++. .++++.+++.|++.+++|+||+.++++|++|+..+.+.......|.++|||++|+|+.+|+++.++++|
T Consensus 2 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~~G 81 (325)
T cd08271 2 KAWVLPKPGAALQLTLEEIEIPGPGAGEVLVKVHAAGLNPVDWKVIAWGPPAWSYPHVPGVDGAGVVVAVGAKVTGWKVG 81 (325)
T ss_pred eeEEEccCCCcceeEEeccCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCcccccceEEEEEEeCCCCCcCCCC
Confidence 445553333 379999999999999999999999999999988876655322346789999999999999999999999
Q ss_pred CEEEEeccccCCCCCccccCCCCccccccccccccccCCCCccCCcceeeEEeecceEEEcCCCCCcccccccchhhHHH
Q 022313 89 DHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITV 168 (299)
Q Consensus 89 d~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta 168 (299)
|+|...+. ....|+|++|+.++.+.++++|++++..+++.+.+.+.++
T Consensus 82 d~V~~~~~--------------------------------~~~~~~~~s~~~~~~~~~~~ip~~~~~~~~a~~~~~~~~a 129 (325)
T cd08271 82 DRVAYHAS--------------------------------LARGGSFAEYTVVDARAVLPLPDSLSFEEAAALPCAGLTA 129 (325)
T ss_pred CEEEeccC--------------------------------CCCCccceeEEEeCHHHeEECCCCCCHHHHHhhhhhHHHH
Confidence 99974221 0135889999999999999999999999999999999999
Q ss_pred HHHhhhccCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEEeCCCHHH---HHHh--c
Q 022313 169 YTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQ---MKAL--G 242 (299)
Q Consensus 169 ~~al~~~~~~~~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~---~~~~--~ 242 (299)
++++.....++++++++|+|+ |.+|++++++++..|++++++. ++++.+.+ +++|.+.+++...... +... .
T Consensus 130 ~~~~~~~~~~~~g~~vlI~g~~~~ig~~~~~~a~~~g~~v~~~~-~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~ 207 (325)
T cd08271 130 YQALFKKLRIEAGRTILITGGAGGVGSFAVQLAKRAGLRVITTC-SKRNFEYV-KSLGADHVIDYNDEDVCERIKEITGG 207 (325)
T ss_pred HHHHHHhcCCCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEE-cHHHHHHH-HHcCCcEEecCCCccHHHHHHHHcCC
Confidence 999987777799999999998 8999999999999999988877 56666666 6899988887665332 3333 2
Q ss_pred CCccEEEEcCCCchhHHHHHHhcccCcEEEEEcCC
Q 022313 243 KSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP 277 (299)
Q Consensus 243 ~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~ 277 (299)
+++|++++++++.. ....+++++++|+++.+|..
T Consensus 208 ~~~d~vi~~~~~~~-~~~~~~~l~~~G~~v~~~~~ 241 (325)
T cd08271 208 RGVDAVLDTVGGET-AAALAPTLAFNGHLVCIQGR 241 (325)
T ss_pred CCCcEEEECCCcHh-HHHHHHhhccCCEEEEEcCC
Confidence 57999999999876 67789999999999998755
No 116
>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast. This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi
Probab=99.95 E-value=1e-26 Score=210.50 Aligned_cols=232 Identities=21% Similarity=0.241 Sum_probs=182.1
Q ss_pred EEeeeCCCCcccceeeecCCC---CCCcEEEEEceeecccchhhhhccCCCCCC-CCccccccccEEEEEecCCCC-Ccc
Q 022313 12 GWAARDPSGVLSPYSFNRRAV---GSDDVSITITHCGVCYADVIWTRNKHGDSK-YPLVPGHEIVGIVKEVGHNVS-RFK 86 (299)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~p~~---~~~evlv~v~~~~i~~~D~~~~~g~~~~~~-~p~~lG~e~~G~V~~vG~~v~-~~~ 86 (299)
++.+.+..+.+++++.+.|.| .++||+||+.++++|++|+..+.+...... .|.++|+|++|+|+++|+++. .|+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~I~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~ 82 (352)
T cd08247 3 ALTFKNNTSPLTITTIKLPLPNCYKDNEIVVKVHAAALNPVDLKLYNSYTFHFKVKEKGLGRDYSGVIVKVGSNVASEWK 82 (352)
T ss_pred eEEEecCCCcceeeccCCCCCCCCCCCeEEEEEEEEecChHhHHHhcccccccccCCCccCceeEEEEEEeCcccccCCC
Confidence 445545545566666666654 899999999999999999887754322112 367899999999999999998 899
Q ss_pred cCCEEEEeccccCCCCCccccCCCCccccccccccccccCCCCccCCcceeeEEeecc----eEEEcCCCCCcccccccc
Q 022313 87 VGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHER----YCYKIANDYPLALAAPLL 162 (299)
Q Consensus 87 ~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~----~~~~~p~~~~~~~aa~~~ 162 (299)
+||+|..... +. ....|+|++|+.++.. .++++|+++++.+++.++
T Consensus 83 ~Gd~V~~~~~----~~--------------------------~~~~g~~~~~~~v~~~~~~~~~~~lP~~l~~~~aa~~~ 132 (352)
T cd08247 83 VGDEVCGIYP----HP--------------------------YGGQGTLSQYLLVDPKKDKKSITRKPENISLEEAAAWP 132 (352)
T ss_pred CCCEEEEeec----CC--------------------------CCCCceeeEEEEEccccccceeEECCCCCCHHHHHHhH
Confidence 9999964211 00 0135899999999987 799999999999999999
Q ss_pred hhhHHHHHHhhhcc-CCCCCCEEEEEcC-ChHHHHHHHHHHHCC-C-eEEEEeCCchHHHHHHHhcCCCEEEeCCCHH--
Q 022313 163 CAGITVYTPMMRHK-MNQPGKSLGVIGL-GGLGHMAVKFGKAFG-L-NVTVLSTSTSKKEEALSLLGADKFVVSSDLE-- 236 (299)
Q Consensus 163 ~~~~ta~~al~~~~-~~~~g~~vlI~G~-g~~G~~a~~~a~~~g-~-~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~-- 236 (299)
.++.|+|+++.... .+++|++|+|+|+ |.+|++++++|+..+ . .++.+. ++++.+.+ +++|++++++.++..
T Consensus 133 ~~~~ta~~~l~~~~~~~~~g~~vlI~ga~~~vg~~~~~~a~~~~~~~~v~~~~-~~~~~~~~-~~~g~~~~i~~~~~~~~ 210 (352)
T cd08247 133 LVLGTAYQILEDLGQKLGPDSKVLVLGGSTSVGRFAIQLAKNHYNIGTVVGTC-SSRSAELN-KKLGADHFIDYDAHSGV 210 (352)
T ss_pred HHHHHHHHHHHHhhhccCCCCeEEEECCCchHHHHHHHHHHhcCCcceEEEEe-ChhHHHHH-HHhCCCEEEecCCCccc
Confidence 99999999998776 6799999999998 799999999999874 4 566665 45555555 789999988866433
Q ss_pred -H----HHHh--cCCccEEEEcCCCchhHHHHHHhcc---cCcEEEEEc
Q 022313 237 -Q----MKAL--GKSLDFIIDTASGDHPFDAYMSLLK---VAGVYVLVG 275 (299)
Q Consensus 237 -~----~~~~--~~~~d~v~d~~g~~~~~~~~~~~l~---~~G~~v~~g 275 (299)
. +... .+++|+++|++|+......++++++ ++|+++.++
T Consensus 211 ~~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~~G~~v~~~ 259 (352)
T cd08247 211 KLLKPVLENVKGQGKFDLILDCVGGYDLFPHINSILKPKSKNGHYVTIV 259 (352)
T ss_pred chHHHHHHhhcCCCCceEEEECCCCHHHHHHHHHHhCccCCCCEEEEEe
Confidence 2 2222 3689999999998555888999999 999999875
No 117
>cd08251 polyketide_synthase polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a
Probab=99.95 E-value=3.4e-26 Score=201.81 Aligned_cols=213 Identities=25% Similarity=0.379 Sum_probs=182.9
Q ss_pred cCCCCCCcEEEEEceeecccchhhhhccCCC-CCCCCccccccccEEEEEecCCCCCcccCCEEEEeccccCCCCCcccc
Q 022313 29 RRAVGSDDVSITITHCGVCYADVIWTRNKHG-DSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCN 107 (299)
Q Consensus 29 ~p~~~~~evlv~v~~~~i~~~D~~~~~g~~~-~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~c~~c~~~~ 107 (299)
.|++.+++++|++.++++|++|+..+.+.+. ....|.++|+|++|+|+++|+++.++++||+|.....
T Consensus 2 ~p~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~----------- 70 (303)
T cd08251 2 VAPPGPGEVRIQVRAFSLNFGDLLCVRGLYPTMPPYPFTPGFEASGVVRAVGPHVTRLAVGDEVIAGTG----------- 70 (303)
T ss_pred CCCCCCCEEEEEEEEeecChHHHHHHCCCCCCCCCCCCCcCceeeEEEEEECCCCCCCCCCCEEEEecC-----------
Confidence 5778899999999999999999988877654 2346788999999999999999999999999974211
Q ss_pred CCCCccccccccccccccCCCCccCCcceeeEEeecceEEEcCCCCCcccccccchhhHHHHHHhhhccCCCCCCEEEEE
Q 022313 108 DGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVI 187 (299)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~al~~~~~~~~g~~vlI~ 187 (299)
...|+|++|+.++++.++++|+++++.+++.++..+.++|.+++ ...++++++++|+
T Consensus 71 ----------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~-~~~~~~g~~vli~ 127 (303)
T cd08251 71 ----------------------ESMGGHATLVTVPEDQVVRKPASLSFEEACALPVVFLTVIDAFA-RAGLAKGEHILIQ 127 (303)
T ss_pred ----------------------CCCcceeeEEEccHHHeEECCCCCCHHHHHHhHHHHHHHHHHHH-hcCCCCCCEEEEe
Confidence 13589999999999999999999999999999999999999986 4566999999998
Q ss_pred cC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEEeCCCHHH---HHHhc--CCccEEEEcCCCchhHHHH
Q 022313 188 GL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQ---MKALG--KSLDFIIDTASGDHPFDAY 261 (299)
Q Consensus 188 G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~---~~~~~--~~~d~v~d~~g~~~~~~~~ 261 (299)
|+ |.+|++++++++..|++++++++++++.+.+ +++|.+++++....+. +.... +++|+++|++++.. ...+
T Consensus 128 ~~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~~~~~~~~-~~~~ 205 (303)
T cd08251 128 TATGGTGLMAVQLARLKGAEIYATASSDDKLEYL-KQLGVPHVINYVEEDFEEEIMRLTGGRGVDVVINTLSGEA-IQKG 205 (303)
T ss_pred cCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHcCCCEEEeCCCccHHHHHHHHcCCCCceEEEECCcHHH-HHHH
Confidence 76 9999999999999999999999998888888 6899999887765433 22332 57999999998755 8899
Q ss_pred HHhcccCcEEEEEcCC
Q 022313 262 MSLLKVAGVYVLVGFP 277 (299)
Q Consensus 262 ~~~l~~~G~~v~~g~~ 277 (299)
+++++++|+++.+|..
T Consensus 206 ~~~l~~~g~~v~~~~~ 221 (303)
T cd08251 206 LNCLAPGGRYVEIAMT 221 (303)
T ss_pred HHHhccCcEEEEEecc
Confidence 9999999999999865
No 118
>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases. Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et
Probab=99.95 E-value=3.2e-26 Score=202.43 Aligned_cols=222 Identities=27% Similarity=0.394 Sum_probs=186.6
Q ss_pred cccceeeecCCCCCCcEEEEEceeecccchhhhhccCCC---CCCCCccccccccEEEEEecCCCCCcccCCEEEEeccc
Q 022313 21 VLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG---DSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYV 97 (299)
Q Consensus 21 ~~~~~~~~~p~~~~~evlv~v~~~~i~~~D~~~~~g~~~---~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~ 97 (299)
.+++.+.+.|.+.++||+|++.++++|++|+..+.|... ....|.++|||++|+|+.+|+++.++++||+|...+..
T Consensus 14 ~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~~G~~V~~~~~~ 93 (309)
T cd05289 14 VLELADVPTPEPGPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLPLIPGHDVAGVVVAVGPGVTGFKVGDEVFGMTPF 93 (309)
T ss_pred ceeecccCCCCCCCCeEEEEEEEeeCCHHHHHHhcCCccccCCCCCCCccccceeEEEEeeCCCCCCCCCCCEEEEccCC
Confidence 355667777888999999999999999999988877542 23457789999999999999999999999999743210
Q ss_pred cCCCCCccccCCCCccccccccccccccCCCCccCCcceeeEEeecceEEEcCCCCCcccccccchhhHHHHHHhhhccC
Q 022313 98 NSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKM 177 (299)
Q Consensus 98 ~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~al~~~~~ 177 (299)
...|+|++|+.++...++++|+++++..++.+++.+.++|+++.....
T Consensus 94 --------------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~ 141 (309)
T cd05289 94 --------------------------------TRGGAYAEYVVVPADELALKPANLSFEEAAALPLAGLTAWQALFELGG 141 (309)
T ss_pred --------------------------------CCCCcceeEEEecHHHhccCCCCCCHHHHHhhhHHHHHHHHHHHhhcC
Confidence 124889999999999999999999999999999999999999988776
Q ss_pred CCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEEeCCCHHHHH-HhcCCccEEEEcCCCc
Q 022313 178 NQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMK-ALGKSLDFIIDTASGD 255 (299)
Q Consensus 178 ~~~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~-~~~~~~d~v~d~~g~~ 255 (299)
+.++++|+|+|+ |.+|++++++++..|++++++++++ +.+.+ +++|.+++++....+..+ ...+++|++++++++.
T Consensus 142 ~~~~~~vlv~g~~g~~g~~~~~~a~~~g~~v~~~~~~~-~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~d~v~~~~~~~ 219 (309)
T cd05289 142 LKAGQTVLIHGAAGGVGSFAVQLAKARGARVIATASAA-NADFL-RSLGADEVIDYTKGDFERAAAPGGVDAVLDTVGGE 219 (309)
T ss_pred CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecch-hHHHH-HHcCCCEEEeCCCCchhhccCCCCceEEEECCchH
Confidence 799999999997 9999999999999999999998776 66666 689988888766533222 1235799999999988
Q ss_pred hhHHHHHHhcccCcEEEEEcCC
Q 022313 256 HPFDAYMSLLKVAGVYVLVGFP 277 (299)
Q Consensus 256 ~~~~~~~~~l~~~G~~v~~g~~ 277 (299)
. ...++++++++|+++.+|..
T Consensus 220 ~-~~~~~~~l~~~g~~v~~g~~ 240 (309)
T cd05289 220 T-LARSLALVKPGGRLVSIAGP 240 (309)
T ss_pred H-HHHHHHHHhcCcEEEEEcCC
Confidence 5 89999999999999999876
No 119
>cd08241 QOR1 Quinone oxidoreductase (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic
Probab=99.95 E-value=9.8e-26 Score=200.41 Aligned_cols=242 Identities=30% Similarity=0.479 Sum_probs=197.7
Q ss_pred CCcccceeeecCCCC-CCcEEEEEceeecccchhhhhccCCC-CCCCCccccccccEEEEEecCCCCCcccCCEEEEecc
Q 022313 19 SGVLSPYSFNRRAVG-SDDVSITITHCGVCYADVIWTRNKHG-DSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTY 96 (299)
Q Consensus 19 ~~~~~~~~~~~p~~~-~~evlv~v~~~~i~~~D~~~~~g~~~-~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~V~~~~~ 96 (299)
++.+++.+.+ |.+. ++|++|++.++++|++|++.+.|.+. ....|.++|||++|+|+.+|+++.++++||+|...+
T Consensus 12 ~~~~~~~~~~-~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~G~~V~~~~- 89 (323)
T cd08241 12 PEDLVLEEVP-PEPGAPGEVRIRVEAAGVNFPDLLMIQGKYQVKPPLPFVPGSEVAGVVEAVGEGVTGFKVGDRVVALT- 89 (323)
T ss_pred cceeEEecCC-CCCCCCCeEEEEEEEEecCHHHHHHHcCCCCCCCCCCCcccceeEEEEEEeCCCCCCCCCCCEEEEec-
Confidence 3456666666 6665 59999999999999999988777653 233466899999999999999999999999997421
Q ss_pred ccCCCCCccccCCCCccccccccccccccCCCCccCCcceeeEEeecceEEEcCCCCCcccccccchhhHHHHHHhhhcc
Q 022313 97 VNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHK 176 (299)
Q Consensus 97 ~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~al~~~~ 176 (299)
..|++++|+.++.+.++++|++++..+++.+...+.++|.++....
T Consensus 90 ----------------------------------~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~ 135 (323)
T cd08241 90 ----------------------------------GQGGFAEEVVVPAAAVFPLPDGLSFEEAAALPVTYGTAYHALVRRA 135 (323)
T ss_pred ----------------------------------CCceeEEEEEcCHHHceeCCCCCCHHHHhhhhhHHHHHHHHHHHhc
Confidence 1488999999999999999999999999889999999999987666
Q ss_pred CCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEEeCCCHHH---HHHhc--CCccEEEE
Q 022313 177 MNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQ---MKALG--KSLDFIID 250 (299)
Q Consensus 177 ~~~~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~---~~~~~--~~~d~v~d 250 (299)
.++++++|+|+|+ |.+|++++++++..|++|+++++++++.+.+ +++|.+.+++....+. +.... +++|++++
T Consensus 136 ~~~~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~~ 214 (323)
T cd08241 136 RLQPGETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEKLALA-RALGADHVIDYRDPDLRERVKALTGGRGVDVVYD 214 (323)
T ss_pred CCCCCCEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCHHHHHHH-HHcCCceeeecCCccHHHHHHHHcCCCCcEEEEE
Confidence 7789999999998 9999999999999999999999998888887 5789888887665333 23332 57999999
Q ss_pred cCCCchhHHHHHHhcccCcEEEEEcCC-Ccee-eChhhhhcCCeeeeeec
Q 022313 251 TASGDHPFDAYMSLLKVAGVYVLVGFP-SKVK-FSPASLNIGNAPLFRFK 298 (299)
Q Consensus 251 ~~g~~~~~~~~~~~l~~~G~~v~~g~~-~~~~-~~~~~l~~~~~~~~g~~ 298 (299)
++|+.. ...++++++++|+++.+|.. .... +++...+.+++++.++.
T Consensus 215 ~~g~~~-~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (323)
T cd08241 215 PVGGDV-FEASLRSLAWGGRLLVIGFASGEIPQIPANLLLLKNISVVGVY 263 (323)
T ss_pred CccHHH-HHHHHHhhccCCEEEEEccCCCCcCcCCHHHHhhcCcEEEEEe
Confidence 999855 88899999999999999876 2222 44445667888887753
No 120
>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.94 E-value=1.5e-25 Score=199.38 Aligned_cols=221 Identities=27% Similarity=0.340 Sum_probs=182.3
Q ss_pred cceeeecCCCCCCcEEEEEceeecccchhhhhccCCC---CCCCCccccccccEEEEEecCCCCCcccCCEEEEeccccC
Q 022313 23 SPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG---DSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNS 99 (299)
Q Consensus 23 ~~~~~~~p~~~~~evlv~v~~~~i~~~D~~~~~g~~~---~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~ 99 (299)
++.+.+.|++.++||+|+++++++|++|.+.+.|.+. ....|.++|||++|+|+++|+++.++++||+|......
T Consensus 15 ~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~-- 92 (319)
T cd08267 15 LEVEVPIPTPKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPPIPGMDFAGEVVAVGSGVTRFKVGDEVFGRLPP-- 92 (319)
T ss_pred ccccCCCCCCCCCEEEEEEEEeeCCHHHHHHHcCCCcccccCCCCCcccceeeEEEEEeCCCCCCCCCCCEEEEeccC--
Confidence 7788999999999999999999999999988877552 12346689999999999999999999999999743210
Q ss_pred CCCCccccCCCCccccccccccccccCCCCccCCcceeeEEeecceEEEcCCCCCcccccccchhhHHHHHHhhhccCCC
Q 022313 100 CRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQ 179 (299)
Q Consensus 100 c~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~al~~~~~~~ 179 (299)
...|+|++|+.++.+.++++|+++++.+++.+++++.++|+++.....++
T Consensus 93 ------------------------------~~~g~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~ 142 (319)
T cd08267 93 ------------------------------KGGGALAEYVVAPESGLAKKPEGVSFEEAAALPVAGLTALQALRDAGKVK 142 (319)
T ss_pred ------------------------------CCCceeeEEEEechhheEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCCC
Confidence 12488999999999999999999999999999999999999998887779
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEEeCCCHHHHHHh--cCCccEEEEcCCCch
Q 022313 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKAL--GKSLDFIIDTASGDH 256 (299)
Q Consensus 180 ~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~--~~~~d~v~d~~g~~~ 256 (299)
++++|+|+|+ |++|++++++|+..|++|++++++ ++.+.+ +++|.+++++....+..... .+++|++++++++..
T Consensus 143 ~g~~vli~g~~g~~g~~~~~la~~~g~~v~~~~~~-~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~ 220 (319)
T cd08267 143 PGQRVLINGASGGVGTFAVQIAKALGAHVTGVCST-RNAELV-RSLGADEVIDYTTEDFVALTAGGEKYDVIFDAVGNSP 220 (319)
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCH-HHHHHH-HHcCCCEeecCCCCCcchhccCCCCCcEEEECCCchH
Confidence 9999999998 999999999999999999998865 666666 78998888876543221222 367999999999532
Q ss_pred -hHHHHHHhcccCcEEEEEcCC
Q 022313 257 -PFDAYMSLLKVAGVYVLVGFP 277 (299)
Q Consensus 257 -~~~~~~~~l~~~G~~v~~g~~ 277 (299)
.....+..++++|+++.+|..
T Consensus 221 ~~~~~~~~~l~~~g~~i~~g~~ 242 (319)
T cd08267 221 FSLYRASLALKPGGRYVSVGGG 242 (319)
T ss_pred HHHHHhhhccCCCCEEEEeccc
Confidence 233444459999999999977
No 121
>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.94 E-value=5e-25 Score=197.50 Aligned_cols=240 Identities=28% Similarity=0.398 Sum_probs=190.8
Q ss_pred CcccceeeecCCCCCCcEEEEEceeecccchhhhhccCCC-CCCCCccccccccEEEEEecCCCCCcccCCEEEEecccc
Q 022313 20 GVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG-DSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVN 98 (299)
Q Consensus 20 ~~~~~~~~~~p~~~~~evlv~v~~~~i~~~D~~~~~g~~~-~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~ 98 (299)
+.+++.+.+.|++.++||+|++.++++|++|...+.|.+. ....|.++|||++|+|+.+|+++.++++||+|....
T Consensus 12 ~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~G~~V~~~~--- 88 (337)
T cd08275 12 DKLKVEKEALPEPSSGEVRVRVEACGLNFADLMARQGLYDSAPKPPFVPGFECAGTVEAVGEGVKDFKVGDRVMGLT--- 88 (337)
T ss_pred cceEEEecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCCCCCCCCCCcceeEEEEEEECCCCcCCCCCCEEEEec---
Confidence 3566777777888999999999999999999988877653 234577899999999999999999999999997421
Q ss_pred CCCCCccccCCCCccccccccccccccCCCCccCCcceeeEEeecceEEEcCCCCCcccccccchhhHHHHHHhhhccCC
Q 022313 99 SCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMN 178 (299)
Q Consensus 99 ~c~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~al~~~~~~ 178 (299)
..|+|++|+.++.+.++++|+++++.+++.+.+++.++|+++.....+
T Consensus 89 --------------------------------~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~ 136 (337)
T cd08275 89 --------------------------------RFGGYAEVVNVPADQVFPLPDGMSFEEAAAFPVNYLTAYYALFELGNL 136 (337)
T ss_pred --------------------------------CCCeeeeEEEecHHHeEECCCCCCHHHHhhhhHHHHHHHHHHHHhhCC
Confidence 238899999999999999999999999999999999999998777777
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeC-CchHHHHHHHhcCCCEEEeCCCHH---HHHHh-cCCccEEEEcC
Q 022313 179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLST-STSKKEEALSLLGADKFVVSSDLE---QMKAL-GKSLDFIIDTA 252 (299)
Q Consensus 179 ~~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~-~~~~~~~~~~~~g~~~v~~~~~~~---~~~~~-~~~~d~v~d~~ 252 (299)
+++++|+|+|+ |.+|++++++|+.. ..+.++.. .+++.+.+ +++|.+.+++..... .+.+. .+++|+++|++
T Consensus 137 ~~~~~vli~g~~g~~g~~~~~~a~~~-~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~~ 214 (337)
T cd08275 137 RPGQSVLVHSAAGGVGLAAGQLCKTV-PNVTVVGTASASKHEAL-KENGVTHVIDYRTQDYVEEVKKISPEGVDIVLDAL 214 (337)
T ss_pred CCCCEEEEEcCcchHHHHHHHHHHHc-cCcEEEEeCCHHHHHHH-HHcCCcEEeeCCCCcHHHHHHHHhCCCceEEEECC
Confidence 99999999998 99999999999998 32233322 33456666 678988888766432 22222 36799999999
Q ss_pred CCchhHHHHHHhcccCcEEEEEcCCC---cee---------------eChhhhhcCCeeeeee
Q 022313 253 SGDHPFDAYMSLLKVAGVYVLVGFPS---KVK---------------FSPASLNIGNAPLFRF 297 (299)
Q Consensus 253 g~~~~~~~~~~~l~~~G~~v~~g~~~---~~~---------------~~~~~l~~~~~~~~g~ 297 (299)
|+.. ...++++++++|+++.+|... ... +....++.+++++.++
T Consensus 215 g~~~-~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (337)
T cd08275 215 GGED-TRKSYDLLKPMGRLVVYGAANLVTGEKRSWFKLAKKWWNRPKVDPMKLISENKSVLGF 276 (337)
T ss_pred cHHH-HHHHHHhhccCcEEEEEeecCCcCcccccccccccccccccccCHHHHhhcCceEEEe
Confidence 9875 888999999999999998761 111 2224556777777765
No 122
>cd05195 enoyl_red enoyl reductase of polyketide synthase. Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase
Probab=99.94 E-value=3.1e-25 Score=194.00 Aligned_cols=203 Identities=28% Similarity=0.391 Sum_probs=175.9
Q ss_pred CcEEEEEceeecccchhhhhccCCCCCCCCccccccccEEEEEecCCCCCcccCCEEEEeccccCCCCCccccCCCCccc
Q 022313 35 DDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHC 114 (299)
Q Consensus 35 ~evlv~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~ 114 (299)
+|++||+.++++|++|++...|.+ ...|.++|||++|+|+++|+++..+++||+|...
T Consensus 1 ~~v~i~v~~~~~~~~d~~~~~g~~--~~~~~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~-------------------- 58 (293)
T cd05195 1 DEVEVEVKAAGLNFRDVLVALGLL--PGDETPLGLECSGIVTRVGSGVTGLKVGDRVMGL-------------------- 58 (293)
T ss_pred CceEEEEEEEecCHHHHHHHhCCC--CCCCCccceeeeEEEEeecCCccCCCCCCEEEEE--------------------
Confidence 589999999999999999887765 2457789999999999999999999999999642
Q ss_pred cccccccccccCCCCccCCcceeeEEeecceEEEcCCCCCcccccccchhhHHHHHHhhhccCCCCCCEEEEEcC-ChHH
Q 022313 115 ARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGL-GGLG 193 (299)
Q Consensus 115 ~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~al~~~~~~~~g~~vlI~G~-g~~G 193 (299)
..|+|++|+.++.+.++++|+++++.+++.+++++.++|.++.....++++++|+|+|+ |.+|
T Consensus 59 ----------------~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~g~~g 122 (293)
T cd05195 59 ----------------APGAFATHVRVDARLVVKIPDSLSFEEAATLPVAYLTAYYALVDLARLQKGESVLIHAAAGGVG 122 (293)
T ss_pred ----------------ecCcccceEEechhheEeCCCCCCHHHHhhchHHHHHHHHHHHHHhccCCCCEEEEecCCCHHH
Confidence 24889999999999999999999999999999999999999877667799999999975 9999
Q ss_pred HHHHHHHHHCCCeEEEEeCCchHHHHHHHhcC--CCEEEeCCCHHH---HHHh--cCCccEEEEcCCCchhHHHHHHhcc
Q 022313 194 HMAVKFGKAFGLNVTVLSTSTSKKEEALSLLG--ADKFVVSSDLEQ---MKAL--GKSLDFIIDTASGDHPFDAYMSLLK 266 (299)
Q Consensus 194 ~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g--~~~v~~~~~~~~---~~~~--~~~~d~v~d~~g~~~~~~~~~~~l~ 266 (299)
++++++++..|++++++++++++.+.+ ++++ ++.+++..+.+. +.+. .+++|++++++++. ....++++++
T Consensus 123 ~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~-~~~~~~~~l~ 200 (293)
T cd05195 123 QAAIQLAQHLGAEVFATVGSEEKREFL-RELGGPVDHIFSSRDLSFADGILRATGGRGVDVVLNSLSGE-LLRASWRCLA 200 (293)
T ss_pred HHHHHHHHHcCCEEEEEeCCHHHHHHH-HHhCCCcceEeecCchhHHHHHHHHhCCCCceEEEeCCCch-HHHHHHHhcc
Confidence 999999999999999999988888887 4666 677777665433 2233 25799999999988 4999999999
Q ss_pred cCcEEEEEcCC
Q 022313 267 VAGVYVLVGFP 277 (299)
Q Consensus 267 ~~G~~v~~g~~ 277 (299)
++|+++.+|..
T Consensus 201 ~~g~~v~~g~~ 211 (293)
T cd05195 201 PFGRFVEIGKR 211 (293)
T ss_pred cCceEEEeecc
Confidence 99999999876
No 123
>smart00829 PKS_ER Enoylreductase. Enoylreductase in Polyketide synthases.
Probab=99.94 E-value=7.5e-25 Score=191.44 Aligned_cols=217 Identities=23% Similarity=0.360 Sum_probs=179.6
Q ss_pred EEEceeecccchhhhhccCCCCCCCCccccccccEEEEEecCCCCCcccCCEEEEeccccCCCCCccccCCCCccccccc
Q 022313 39 ITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSV 118 (299)
Q Consensus 39 v~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~ 118 (299)
||+.++++|++|++.+.|.++ .|.++|||++|+|+++|+++..|++||+|...
T Consensus 2 i~v~~~~i~~~d~~~~~g~~~---~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~------------------------ 54 (288)
T smart00829 2 VEVRAAGLNFRDVLIALGLLP---GEAVLGGECAGVVTRVGPGVTGLAVGDRVMGL------------------------ 54 (288)
T ss_pred eeEEEEecCHHHHHHhcCCCC---CCCCCCceeEEEEEeeCCCCcCCCCCCEEEEE------------------------
Confidence 789999999999998877553 36789999999999999999999999999642
Q ss_pred cccccccCCCCccCCcceeeEEeecceEEEcCCCCCcccccccchhhHHHHHHhhhccCCCCCCEEEEEcC-ChHHHHHH
Q 022313 119 YTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAV 197 (299)
Q Consensus 119 ~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~al~~~~~~~~g~~vlI~G~-g~~G~~a~ 197 (299)
..|+|++|+.++.+.++++|+++++.+++.+.+.+.++|.++.....++++++|+|+|+ |.+|++++
T Consensus 55 ------------~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~~~~g~~~~ 122 (288)
T smart00829 55 ------------APGSFATYVRTDARLVVPIPDGLSFEEAATVPVVFLTAYYALVDLARLRPGESVLIHAAAGGVGQAAI 122 (288)
T ss_pred ------------cCCceeeEEEccHHHeEECCCCCCHHHHHhchHHHHHHHHHHHHHhCCCCCCEEEEecCCcHHHHHHH
Confidence 24889999999999999999999999999999999999999866666799999999986 99999999
Q ss_pred HHHHHCCCeEEEEeCCchHHHHHHHhcCC--CEEEeCCCHHH---HHHhc--CCccEEEEcCCCchhHHHHHHhcccCcE
Q 022313 198 KFGKAFGLNVTVLSTSTSKKEEALSLLGA--DKFVVSSDLEQ---MKALG--KSLDFIIDTASGDHPFDAYMSLLKVAGV 270 (299)
Q Consensus 198 ~~a~~~g~~v~~~~~~~~~~~~~~~~~g~--~~v~~~~~~~~---~~~~~--~~~d~v~d~~g~~~~~~~~~~~l~~~G~ 270 (299)
++++..|++|+++++++++.+.+ +++|. +.+++..+.+. +.+.. +++|+++|++++. ....++++++++|+
T Consensus 123 ~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~-~~~~~~~~l~~~g~ 200 (288)
T smart00829 123 QLAQHLGAEVFATAGSPEKRDFL-RELGIPDDHIFSSRDLSFADEILRATGGRGVDVVLNSLAGE-FLDASLRCLAPGGR 200 (288)
T ss_pred HHHHHcCCEEEEEeCCHHHHHHH-HHcCCChhheeeCCCccHHHHHHHHhCCCCcEEEEeCCCHH-HHHHHHHhccCCcE
Confidence 99999999999999999988888 68997 77777665433 22222 4799999999975 48889999999999
Q ss_pred EEEEcCC---CceeeChhhhhcCCeeeeee
Q 022313 271 YVLVGFP---SKVKFSPASLNIGNAPLFRF 297 (299)
Q Consensus 271 ~v~~g~~---~~~~~~~~~l~~~~~~~~g~ 297 (299)
++.+|.. ....+++.. +.+++++.++
T Consensus 201 ~v~~g~~~~~~~~~~~~~~-~~~~~~~~~~ 229 (288)
T smart00829 201 FVEIGKRDIRDNSQLGMAP-FRRNVSYHAV 229 (288)
T ss_pred EEEEcCcCCccccccchhh-hcCCceEEEE
Confidence 9999876 223344333 3455555543
No 124
>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members. This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD
Probab=99.90 E-value=1.9e-22 Score=176.43 Aligned_cols=193 Identities=27% Similarity=0.372 Sum_probs=156.2
Q ss_pred CCCCccccccccEEEEEecCCCCCcccCCEEEEeccccCCCCCccccCCCCccccccccccccccCCCCccCCcceeeEE
Q 022313 61 SKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIV 140 (299)
Q Consensus 61 ~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~ 140 (299)
.++|.++|||++|+|+++|+++++|++||+|.. .+.|++|+.
T Consensus 18 ~~~p~v~g~e~~G~V~~vG~~v~~~~~Gd~V~~--------------------------------------~~~~~~~~~ 59 (277)
T cd08255 18 LPLPLPPGYSSVGRVVEVGSGVTGFKPGDRVFC--------------------------------------FGPHAERVV 59 (277)
T ss_pred CcCCcccCcceeEEEEEeCCCCCCCCCCCEEEe--------------------------------------cCCcceEEE
Confidence 558899999999999999999999999999963 135899999
Q ss_pred eecceEEEcCCCCCcccccccchhhHHHHHHhhhccCCCCCCEEEEEcCChHHHHHHHHHHHCCCe-EEEEeCCchHHHH
Q 022313 141 VHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLN-VTVLSTSTSKKEE 219 (299)
Q Consensus 141 ~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~al~~~~~~~~g~~vlI~G~g~~G~~a~~~a~~~g~~-v~~~~~~~~~~~~ 219 (299)
++.+.++++|+++++.+++.+ +.+.++|+++.. ..++++++++|+|+|.+|++++++|+..|++ |+++++++++.+.
T Consensus 60 v~~~~~~~ip~~l~~~~aa~~-~~~~ta~~~~~~-~~~~~g~~vlI~g~g~vg~~~i~~a~~~g~~~vi~~~~~~~~~~~ 137 (277)
T cd08255 60 VPANLLVPLPDGLPPERAALT-ALAATALNGVRD-AEPRLGERVAVVGLGLVGLLAAQLAKAAGAREVVGVDPDAARREL 137 (277)
T ss_pred cCHHHeeECcCCCCHHHhHHH-HHHHHHHHHHHh-cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEECCCHHHHHH
Confidence 999999999999999998888 789999999874 5569999999998899999999999999998 9999998888885
Q ss_pred HHHhcC-CCEEEeCCCHHHHHHhcCCccEEEEcCCCchhHHHHHHhcccCcEEEEEcCC-CceeeChhhhhcCCeeeeee
Q 022313 220 ALSLLG-ADKFVVSSDLEQMKALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP-SKVKFSPASLNIGNAPLFRF 297 (299)
Q Consensus 220 ~~~~~g-~~~v~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~-~~~~~~~~~l~~~~~~~~g~ 297 (299)
+ +++| .+++++..+.. ...+++|++||+++........+++++++|+++.+|.. .........+..+.+++.++
T Consensus 138 ~-~~~g~~~~~~~~~~~~---~~~~~~d~vl~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 213 (277)
T cd08255 138 A-EALGPADPVAADTADE---IGGRGADVVIEASGSPSALETALRLLRDRGRVVLVGWYGLKPLLLGEEFHFKRLPIRSS 213 (277)
T ss_pred H-HHcCCCccccccchhh---hcCCCCCEEEEccCChHHHHHHHHHhcCCcEEEEEeccCCCccccHHHHHhccCeEEee
Confidence 5 7888 56665443211 12367999999998766688999999999999999987 33111122344455555543
No 125
>PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1.1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A ....
Probab=99.89 E-value=3.6e-23 Score=155.78 Aligned_cols=108 Identities=34% Similarity=0.659 Sum_probs=93.1
Q ss_pred CCcEEEEEceeecccchhhhhcc-CCCCCCCCccccccccEEEEEecCCCCCcccCCEEEEeccccCCCCCccccCCCCc
Q 022313 34 SDDVSITITHCGVCYADVIWTRN-KHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEV 112 (299)
Q Consensus 34 ~~evlv~v~~~~i~~~D~~~~~g-~~~~~~~p~~lG~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~ 112 (299)
|+||||||++++||++|++.+.| .......|.++|||++|+|+++|+++++|++||+|++.+.. .|+.|.+|+.+.+.
T Consensus 1 P~eVlVkv~a~gic~~D~~~~~g~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd~V~~~~~~-~~~~c~~c~~~~~~ 79 (109)
T PF08240_consen 1 PGEVLVKVRAAGICGSDLHIREGGPPPPPKFPLILGHEGVGVVVAVGPGVTDFKVGDRVVVSPNI-GCGECEYCLSGRPN 79 (109)
T ss_dssp TTEEEEEEEEEEE-HHHHHHHTTSSSSTSSSSEES-SEEEEEEEEESTTTTSSGTT-EEEEESEE-ETSSSHHHHTTTGG
T ss_pred CCEEEEEEEEeeeCHHHHHHHhhccccCCCCCcccccceeeeeeeeccccccccccceeeeeccc-CccCchhhcCCccc
Confidence 68999999999999999999988 34457889999999999999999999999999999987765 59999999999999
Q ss_pred cccccccccccccCCCCccCCcceeeEEeecceEEEc
Q 022313 113 HCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKI 149 (299)
Q Consensus 113 ~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~ 149 (299)
+|+..... |....|+|+||+.+|+++++++
T Consensus 80 ~c~~~~~~-------g~~~~G~~aey~~v~~~~~~~v 109 (109)
T PF08240_consen 80 LCPNPEVL-------GLGLDGGFAEYVVVPARNLVPV 109 (109)
T ss_dssp GTTTBEET-------TTSSTCSSBSEEEEEGGGEEEE
T ss_pred cCCCCCEe-------EcCCCCcccCeEEEehHHEEEC
Confidence 99876544 3346799999999999999875
No 126
>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]
Probab=99.88 E-value=8.5e-21 Score=160.16 Aligned_cols=228 Identities=20% Similarity=0.237 Sum_probs=175.3
Q ss_pred CCCCCCcEEEEEceeecccchhhhhccCCCC-CCCCccccc----cccEEEEEecCCCCCcccCCEEEEeccccCCCCCc
Q 022313 30 RAVGSDDVSITITHCGVCYADVIWTRNKHGD-SKYPLVPGH----EIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCE 104 (299)
Q Consensus 30 p~~~~~evlv~v~~~~i~~~D~~~~~g~~~~-~~~p~~lG~----e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~c~~c~ 104 (299)
.++.+++||||..|.+..+.-...++...+. --.|+.+|- .++|+|++. +..++++||.|..
T Consensus 33 ~~~~s~~vlvknlYLS~DPymR~rM~~~~~~~y~~~~~~G~pi~g~GV~kVi~S--~~~~~~~GD~v~g----------- 99 (343)
T KOG1196|consen 33 VPLGSGEVLVKNLYLSCDPYMRIRMGKPDPSDYAPPYEPGKPIDGFGVAKVIDS--GHPNYKKGDLVWG----------- 99 (343)
T ss_pred CCCCCccEEeEeeeecCCHHHHhhccCCCcccccCcccCCcEecCCceEEEEec--CCCCCCcCceEEE-----------
Confidence 4678899999999999976554322211110 112333332 678999995 5578999999952
Q ss_pred cccCCCCccccccccccccccCCCCccCCcceeeEEeecce--EEEcCC--CCCcccc-cccchhhHHHHHHhhhccCCC
Q 022313 105 YCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERY--CYKIAN--DYPLALA-APLLCAGITVYTPMMRHKMNQ 179 (299)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~--~~~~p~--~~~~~~a-a~~~~~~~ta~~al~~~~~~~ 179 (299)
--+|.||..+++.. .++++. ++++... ..+..+.+|||-.+......+
T Consensus 100 ---------------------------~~gWeeysii~~~~~~~~ki~~~~~~pLs~ylg~lGm~glTAy~Gf~ei~~pk 152 (343)
T KOG1196|consen 100 ---------------------------IVGWEEYSVITPNDLEHFKIQHPTDVPLSYYLGLLGMPGLTAYAGFYEICSPK 152 (343)
T ss_pred ---------------------------eccceEEEEecCcchhcccCCCCCccCHhhhhhccCCchhHHHHHHHHhcCCC
Confidence 12799999997653 444443 4444433 356778899999988777779
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEEeCCCHHHHHHh-----cCCccEEEEcCC
Q 022313 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKAL-----GKSLDFIIDTAS 253 (299)
Q Consensus 180 ~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~-----~~~~d~v~d~~g 253 (299)
+|++|+|.|| |++|+++.|+|+.+|++|+.++.++++...+++++|.+..+|+.++..+.+. .+++|+.||++|
T Consensus 153 ~geTv~VSaAsGAvGql~GQ~Ak~~Gc~VVGsaGS~EKv~ll~~~~G~d~afNYK~e~~~~~aL~r~~P~GIDiYfeNVG 232 (343)
T KOG1196|consen 153 KGETVFVSAASGAVGQLVGQFAKLMGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLSAALKRCFPEGIDIYFENVG 232 (343)
T ss_pred CCCEEEEeeccchhHHHHHHHHHhcCCEEEEecCChhhhhhhHhccCCccceeccCccCHHHHHHHhCCCcceEEEeccC
Confidence 9999999987 9999999999999999999999999999999999999999999987433332 379999999999
Q ss_pred CchhHHHHHHhcccCcEEEEEcCCC----cee---eChhhhhcCCeeeeeec
Q 022313 254 GDHPFDAYMSLLKVAGVYVLVGFPS----KVK---FSPASLNIGNAPLFRFK 298 (299)
Q Consensus 254 ~~~~~~~~~~~l~~~G~~v~~g~~~----~~~---~~~~~l~~~~~~~~g~~ 298 (299)
+.. +.+++..|+.+|+++.+|+.+ ..+ -++.+.+.|++++.||.
T Consensus 233 G~~-lDavl~nM~~~gri~~CG~ISqYN~~~~~~~~~l~~ii~Kr~~iqgfl 283 (343)
T KOG1196|consen 233 GKM-LDAVLLNMNLHGRIAVCGMISQYNLENPEGLHNLSTIIYKRIRIQGFL 283 (343)
T ss_pred cHH-HHHHHHhhhhccceEeeeeehhccccCCccccchhhheeeeEEeeeEE
Confidence 987 999999999999999999881 222 22357789999999985
No 127
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=99.86 E-value=2.2e-21 Score=186.32 Aligned_cols=221 Identities=15% Similarity=0.217 Sum_probs=183.9
Q ss_pred CCCCCcEEEEEceeecccchhhhhccCCCCCCC-------CccccccccEEEEEecCCCCCcccCCEEEEeccccCCCCC
Q 022313 31 AVGSDDVSITITHCGVCYADVIWTRNKHGDSKY-------PLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDC 103 (299)
Q Consensus 31 ~~~~~evlv~v~~~~i~~~D~~~~~g~~~~~~~-------p~~lG~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~c~~c 103 (299)
+..++.=+-.|-|+.+|.+|+.+..|..+.... ..+||-|++|+ .+-|.||+..
T Consensus 1441 ~~~~~~e~CtVYYAplNFRDiMLasGkL~~DAiPG~~a~qdclLGmEFsGR----------d~~GrRvM~m--------- 1501 (2376)
T KOG1202|consen 1441 PTCPGLELCTVYYAPLNFRDIMLASGKLSPDAIPGDLASQDCLLGMEFSGR----------DASGRRVMGM--------- 1501 (2376)
T ss_pred CCCCCCceeEEEeccccHHHHHHhcCCCCcccCCCccchhhheeceeeccc----------cCCCcEEEEe---------
Confidence 346666789999999999999999888753222 35789999998 4559999743
Q ss_pred ccccCCCCccccccccccccccCCCCccCCcceeeEEeecceEEEcCCCCCcccccccchhhHHHHHHhhhccCCCCCCE
Q 022313 104 EYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQPGKS 183 (299)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~al~~~~~~~~g~~ 183 (299)
...-++++.+.++.+.+|.+|++..+++|++.|+.+.|+|+|+-..+..++|++
T Consensus 1502 --------------------------vpAksLATt~l~~rd~lWevP~~WTleeAstVP~VYsTaYYALVvRG~mkkGek 1555 (2376)
T KOG1202|consen 1502 --------------------------VPAKSLATTVLASRDFLWEVPSKWTLEEASTVPVVYSTAYYALVVRGQMKKGEK 1555 (2376)
T ss_pred --------------------------eehhhhhhhhhcchhhhhhCCcccchhhcccCceEeeeehhhhhhhccccCCcE
Confidence 334678888888999999999999999999999999999999988888899999
Q ss_pred EEEEc-CChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcC---CCEEEeCCCHHH---HHHh--cCCccEEEEcCCC
Q 022313 184 LGVIG-LGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLG---ADKFVVSSDLEQ---MKAL--GKSLDFIIDTASG 254 (299)
Q Consensus 184 vlI~G-~g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g---~~~v~~~~~~~~---~~~~--~~~~d~v~d~~g~ 254 (299)
+||++ +|++|++|+.+|...|++|+.++.+.++++.+++.|+ ..++-|.++-+. +.+- ++|+|+|++....
T Consensus 1556 iLIHaGsGGVGQAAIaiALa~G~~VFTTVGSaEKRefL~~rFPqLqe~~~~NSRdtsFEq~vl~~T~GrGVdlVLNSLae 1635 (2376)
T KOG1202|consen 1556 ILIHAGSGGVGQAAIAIALAHGCTVFTTVGSAEKREFLLKRFPQLQETNFANSRDTSFEQHVLWHTKGRGVDLVLNSLAE 1635 (2376)
T ss_pred EEEecCCCchhHHHHHHHHHcCCEEEEecCcHHHHHHHHHhchhhhhhcccccccccHHHHHHHHhcCCCeeeehhhhhH
Confidence 99995 5999999999999999999999999999999988888 456667666322 2222 4799999999999
Q ss_pred chhHHHHHHhcccCcEEEEEcCC-CceeeCh-hhhhcCCeeeeee
Q 022313 255 DHPFDAYMSLLKVAGVYVLVGFP-SKVKFSP-ASLNIGNAPLFRF 297 (299)
Q Consensus 255 ~~~~~~~~~~l~~~G~~v~~g~~-~~~~~~~-~~l~~~~~~~~g~ 297 (299)
.. ++++++||+.+|||..+|.. -+.+-|+ +..+.|+.+++|-
T Consensus 1636 Ek-LQASiRCLa~~GRFLEIGKfDLSqNspLGMavfLkNvsfHGi 1679 (2376)
T KOG1202|consen 1636 EK-LQASIRCLALHGRFLEIGKFDLSQNSPLGMAVFLKNVSFHGI 1679 (2376)
T ss_pred HH-HHHHHHHHHhcCeeeeecceecccCCcchhhhhhcccceeee
Confidence 88 99999999999999999998 2333333 4567899999885
No 128
>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1.1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....
Probab=99.59 E-value=1.6e-14 Score=111.96 Aligned_cols=107 Identities=29% Similarity=0.417 Sum_probs=96.1
Q ss_pred hHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEEeCCCHH---HHHHhc--CCccEEEEcCCCchhHHHHHHhc
Q 022313 191 GLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLE---QMKALG--KSLDFIIDTASGDHPFDAYMSLL 265 (299)
Q Consensus 191 ~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~---~~~~~~--~~~d~v~d~~g~~~~~~~~~~~l 265 (299)
++|++++|+|+..|++|+++++++++++.+ +++|+++++++++.+ .+.++. +++|+||||+|....++.+++++
T Consensus 1 ~vG~~a~q~ak~~G~~vi~~~~~~~k~~~~-~~~Ga~~~~~~~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l 79 (130)
T PF00107_consen 1 GVGLMAIQLAKAMGAKVIATDRSEEKLELA-KELGADHVIDYSDDDFVEQIRELTGGRGVDVVIDCVGSGDTLQEAIKLL 79 (130)
T ss_dssp HHHHHHHHHHHHTTSEEEEEESSHHHHHHH-HHTTESEEEETTTSSHHHHHHHHTTTSSEEEEEESSSSHHHHHHHHHHE
T ss_pred ChHHHHHHHHHHcCCEEEEEECCHHHHHHH-HhhcccccccccccccccccccccccccceEEEEecCcHHHHHHHHHHh
Confidence 589999999999999999999999998888 799999999988754 444444 37999999999777899999999
Q ss_pred ccCcEEEEEcCC--CceeeChhhhhcCCeeeeeec
Q 022313 266 KVAGVYVLVGFP--SKVKFSPASLNIGNAPLFRFK 298 (299)
Q Consensus 266 ~~~G~~v~~g~~--~~~~~~~~~l~~~~~~~~g~~ 298 (299)
+++|+++.+|.. ...+++...++.|++++.|+.
T Consensus 80 ~~~G~~v~vg~~~~~~~~~~~~~~~~~~~~i~g~~ 114 (130)
T PF00107_consen 80 RPGGRIVVVGVYGGDPISFNLMNLMFKEITIRGSW 114 (130)
T ss_dssp EEEEEEEEESSTSTSEEEEEHHHHHHTTEEEEEES
T ss_pred ccCCEEEEEEccCCCCCCCCHHHHHhCCcEEEEEc
Confidence 999999999999 699999999999999999975
No 129
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=99.27 E-value=8.9e-11 Score=109.66 Aligned_cols=119 Identities=19% Similarity=0.207 Sum_probs=94.7
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEE-EeCCCH-------------HH---H---
Q 022313 179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKF-VVSSDL-------------EQ---M--- 238 (299)
Q Consensus 179 ~~g~~vlI~G~g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v-~~~~~~-------------~~---~--- 238 (299)
.++++|+|+|+|.+|+.+++.|+.+|++|++++.++++++++ +++|++.+ ++..+. +. .
T Consensus 163 ~pg~kVlViGaG~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~a-eslGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~~~ 241 (509)
T PRK09424 163 VPPAKVLVIGAGVAGLAAIGAAGSLGAIVRAFDTRPEVAEQV-ESMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEMAL 241 (509)
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHcCCeEEEeccccccccccchhhhcchhHHHHHHHH
Confidence 689999999999999999999999999999999999999988 68999854 444221 10 0
Q ss_pred -HHhcCCccEEEEcCCCc-----hh-HHHHHHhcccCcEEEEEcCC--C--ceeeChhhhhc-CCeeeeeec
Q 022313 239 -KALGKSLDFIIDTASGD-----HP-FDAYMSLLKVAGVYVLVGFP--S--KVKFSPASLNI-GNAPLFRFK 298 (299)
Q Consensus 239 -~~~~~~~d~v~d~~g~~-----~~-~~~~~~~l~~~G~~v~~g~~--~--~~~~~~~~l~~-~~~~~~g~~ 298 (299)
.+..+++|+||+|++.+ .. .+.+++.++++|+++++|.. . ..+++...++. +++++.|+.
T Consensus 242 ~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpGgvIVdvg~~~GG~~e~t~~~~~v~~~~gVti~Gv~ 313 (509)
T PRK09424 242 FAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPGSVIVDLAAENGGNCELTVPGEVVVTDNGVTIIGYT 313 (509)
T ss_pred HHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCCCEEEEEccCCCCCcccccCccceEeECCEEEEEeC
Confidence 11125799999999963 24 49999999999999999985 3 35555566776 899999853
No 130
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=99.13 E-value=1.3e-09 Score=99.49 Aligned_cols=120 Identities=16% Similarity=0.174 Sum_probs=97.7
Q ss_pred HHHhhhc-cCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEEeCCCHHHHHHhcCCccE
Q 022313 169 YTPMMRH-KMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDF 247 (299)
Q Consensus 169 ~~al~~~-~~~~~g~~vlI~G~g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~ 247 (299)
|.++.+. ....+|++|+|+|.|.+|+.+++.++..|++|++++.++.+.+.+ +++|++.+ +. .+...++|+
T Consensus 189 ~~~i~r~t~~~l~GktVvViG~G~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A-~~~G~~~~-~~------~e~v~~aDV 260 (413)
T cd00401 189 IDGIKRATDVMIAGKVAVVAGYGDVGKGCAQSLRGQGARVIVTEVDPICALQA-AMEGYEVM-TM------EEAVKEGDI 260 (413)
T ss_pred HHHHHHhcCCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECChhhHHHH-HhcCCEEc-cH------HHHHcCCCE
Confidence 4555443 444789999999999999999999999999999999998888887 68898543 21 123367899
Q ss_pred EEEcCCCchhHHHH-HHhcccCcEEEEEcCCCceeeChhhhhcCCeeeeee
Q 022313 248 IIDTASGDHPFDAY-MSLLKVAGVYVLVGFPSKVKFSPASLNIGNAPLFRF 297 (299)
Q Consensus 248 v~d~~g~~~~~~~~-~~~l~~~G~~v~~g~~~~~~~~~~~l~~~~~~~~g~ 297 (299)
||+++|....+... ++.++++|+++.+|.. ...+++..+..+++++.|-
T Consensus 261 VI~atG~~~~i~~~~l~~mk~GgilvnvG~~-~~eId~~~L~~~el~i~g~ 310 (413)
T cd00401 261 FVTTTGNKDIITGEHFEQMKDGAIVCNIGHF-DVEIDVKGLKENAVEVVNI 310 (413)
T ss_pred EEECCCCHHHHHHHHHhcCCCCcEEEEeCCC-CCccCHHHHHhhccEEEEc
Confidence 99999998877765 9999999999999966 5678888899888888764
No 131
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=98.68 E-value=1.3e-06 Score=77.18 Aligned_cols=119 Identities=17% Similarity=0.198 Sum_probs=87.6
Q ss_pred HhhhccCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEEeCCCHHHHHHhcCCccEEEE
Q 022313 171 PMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIID 250 (299)
Q Consensus 171 al~~~~~~~~g~~vlI~G~g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~v~d 250 (299)
+++.....-.+++++|+|.|.+|+.+++.++.+|++|++++++.++.+++ +++|.+.+ . .+.+.+...++|+||+
T Consensus 142 a~~~~~~~l~g~kvlViG~G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~~-~~~G~~~~-~---~~~l~~~l~~aDiVI~ 216 (296)
T PRK08306 142 AIEHTPITIHGSNVLVLGFGRTGMTLARTLKALGANVTVGARKSAHLARI-TEMGLSPF-H---LSELAEEVGKIDIIFN 216 (296)
T ss_pred HHHhCCCCCCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHH-HHcCCeee-c---HHHHHHHhCCCCEEEE
Confidence 44433332468999999999999999999999999999999998887777 57886533 1 1233444578999999
Q ss_pred cCCCchhHHHHHHhcccCcEEEEEcCC-CceeeChhhhhcCCeeeee
Q 022313 251 TASGDHPFDAYMSLLKVAGVYVLVGFP-SKVKFSPASLNIGNAPLFR 296 (299)
Q Consensus 251 ~~g~~~~~~~~~~~l~~~G~~v~~g~~-~~~~~~~~~l~~~~~~~~g 296 (299)
+++.....+..++.+++++.+++++.. ...++ ...-.++++..+
T Consensus 217 t~p~~~i~~~~l~~~~~g~vIIDla~~pggtd~--~~a~~~Gv~~~~ 261 (296)
T PRK08306 217 TIPALVLTKEVLSKMPPEALIIDLASKPGGTDF--EYAEKRGIKALL 261 (296)
T ss_pred CCChhhhhHHHHHcCCCCcEEEEEccCCCCcCe--eehhhCCeEEEE
Confidence 998765566778899999999999887 44444 233344555543
No 132
>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit. In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.
Probab=98.64 E-value=4.2e-07 Score=85.07 Aligned_cols=98 Identities=26% Similarity=0.274 Sum_probs=77.7
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEE-eCCC-------------HHH-------
Q 022313 179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFV-VSSD-------------LEQ------- 237 (299)
Q Consensus 179 ~~g~~vlI~G~g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~-~~~~-------------~~~------- 237 (299)
.++++|+|+|+|.+|+.+++.++.+|++|+++++++++++.+ +++|++.+. +..+ .+.
T Consensus 162 vp~akVlViGaG~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a-~~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~~ 240 (511)
T TIGR00561 162 VPPAKVLVIGAGVAGLAAIGAANSLGAIVRAFDTRPEVKEQV-QSMGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEMEL 240 (511)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHcCCeEEeccccccccccccceeecCHHHHHHHHHH
Confidence 467999999999999999999999999999999999988888 679976533 2211 011
Q ss_pred HHHhcCCccEEEEcC---CCch---hHHHHHHhcccCcEEEEEcCC
Q 022313 238 MKALGKSLDFIIDTA---SGDH---PFDAYMSLLKVAGVYVLVGFP 277 (299)
Q Consensus 238 ~~~~~~~~d~v~d~~---g~~~---~~~~~~~~l~~~G~~v~~g~~ 277 (299)
..+..+++|++|+++ |.+. ..+..++.+++++.+++++..
T Consensus 241 ~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpGsvIVDlA~d 286 (511)
T TIGR00561 241 FAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAGSVIVDLAAE 286 (511)
T ss_pred HHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCCCEEEEeeeC
Confidence 222347899999999 5432 678889999999999999766
No 133
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=98.59 E-value=1.2e-06 Score=80.49 Aligned_cols=110 Identities=15% Similarity=0.209 Sum_probs=84.2
Q ss_pred HHHHHHhhhccC-CCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEEeCCCHHHHHHhcCC
Q 022313 166 ITVYTPMMRHKM-NQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKS 244 (299)
Q Consensus 166 ~ta~~al~~~~~-~~~g~~vlI~G~g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~ 244 (299)
..+|+++.+... .-+|++|+|+|.|.+|..+++.++..|++|+++++++.+..++ ...|++ +.+ +.+...+
T Consensus 196 ~s~~~ai~rat~~~l~Gk~VlViG~G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A-~~~G~~-v~~------l~eal~~ 267 (425)
T PRK05476 196 ESLLDGIKRATNVLIAGKVVVVAGYGDVGKGCAQRLRGLGARVIVTEVDPICALQA-AMDGFR-VMT------MEEAAEL 267 (425)
T ss_pred hhhHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCchhhHHH-HhcCCE-ecC------HHHHHhC
Confidence 445677666633 3489999999999999999999999999999999988776666 345654 221 2233468
Q ss_pred ccEEEEcCCCchhHH-HHHHhcccCcEEEEEcCC-CceeeC
Q 022313 245 LDFIIDTASGDHPFD-AYMSLLKVAGVYVLVGFP-SKVKFS 283 (299)
Q Consensus 245 ~d~v~d~~g~~~~~~-~~~~~l~~~G~~v~~g~~-~~~~~~ 283 (299)
+|+|++++|....+. ..+..+++++.++.+|.. ...+++
T Consensus 268 aDVVI~aTG~~~vI~~~~~~~mK~GailiNvG~~d~Eid~~ 308 (425)
T PRK05476 268 GDIFVTATGNKDVITAEHMEAMKDGAILANIGHFDNEIDVA 308 (425)
T ss_pred CCEEEECCCCHHHHHHHHHhcCCCCCEEEEcCCCCCccChH
Confidence 999999999877665 688999999999999987 444433
No 134
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=98.40 E-value=4.1e-06 Score=76.30 Aligned_cols=98 Identities=19% Similarity=0.248 Sum_probs=76.0
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEEeCCCHHHHHHhcCCccEEEEcCC---C--
Q 022313 180 PGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTAS---G-- 254 (299)
Q Consensus 180 ~g~~vlI~G~g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~v~d~~g---~-- 254 (299)
++.+|+|+|+|.+|+.+++.++.+|++|+++++++++.+.+.+.++........+.+.+.+....+|++|++++ .
T Consensus 166 ~~~~VlViGaG~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g~~v~~~~~~~~~l~~~l~~aDvVI~a~~~~g~~~ 245 (370)
T TIGR00518 166 EPGDVTIIGGGVVGTNAAKMANGLGATVTILDINIDRLRQLDAEFGGRIHTRYSNAYEIEDAVKRADLLIGAVLIPGAKA 245 (370)
T ss_pred CCceEEEEcCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcCceeEeccCCHHHHHHHHccCCEEEEccccCCCCC
Confidence 45669999999999999999999999999999998888887666765433333444555555578999999973 2
Q ss_pred ch-hHHHHHHhcccCcEEEEEcCC
Q 022313 255 DH-PFDAYMSLLKVAGVYVLVGFP 277 (299)
Q Consensus 255 ~~-~~~~~~~~l~~~G~~v~~g~~ 277 (299)
+. .....++.+++++.+++++..
T Consensus 246 p~lit~~~l~~mk~g~vIvDva~d 269 (370)
T TIGR00518 246 PKLVSNSLVAQMKPGAVIVDVAID 269 (370)
T ss_pred CcCcCHHHHhcCCCCCEEEEEecC
Confidence 11 247788889999999999866
No 135
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=98.36 E-value=6.2e-06 Score=75.37 Aligned_cols=102 Identities=18% Similarity=0.215 Sum_probs=79.1
Q ss_pred HHHHhhhc-cCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEEeCCCHHHHHHhcCCcc
Q 022313 168 VYTPMMRH-KMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLD 246 (299)
Q Consensus 168 a~~al~~~-~~~~~g~~vlI~G~g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d 246 (299)
.+.++.+. ....+|++|+|+|.|.+|+..++.++..|++|++++.++.+..++ ...|+. +.+. .+...+.|
T Consensus 181 ~~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~ak~~Ga~ViV~d~dp~r~~~A-~~~G~~-v~~l------eeal~~aD 252 (406)
T TIGR00936 181 TIDGILRATNLLIAGKTVVVAGYGWCGKGIAMRARGMGARVIVTEVDPIRALEA-AMDGFR-VMTM------EEAAKIGD 252 (406)
T ss_pred HHHHHHHhcCCCCCcCEEEEECCCHHHHHHHHHHhhCcCEEEEEeCChhhHHHH-HhcCCE-eCCH------HHHHhcCC
Confidence 34555444 334789999999999999999999999999999999888776665 455653 3221 22335789
Q ss_pred EEEEcCCCchhHHH-HHHhcccCcEEEEEcCC
Q 022313 247 FIIDTASGDHPFDA-YMSLLKVAGVYVLVGFP 277 (299)
Q Consensus 247 ~v~d~~g~~~~~~~-~~~~l~~~G~~v~~g~~ 277 (299)
++|+++|....+.. .+..+++++.++.+|..
T Consensus 253 VVItaTG~~~vI~~~~~~~mK~GailiN~G~~ 284 (406)
T TIGR00936 253 IFITATGNKDVIRGEHFENMKDGAIVANIGHF 284 (406)
T ss_pred EEEECCCCHHHHHHHHHhcCCCCcEEEEECCC
Confidence 99999999886664 88999999999999887
No 136
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=98.34 E-value=1.4e-07 Score=87.22 Aligned_cols=184 Identities=15% Similarity=0.184 Sum_probs=115.5
Q ss_pred cccccccEEEEEecCCCCCcccCCEEEEeccccCCCCCccccCCCCccccccccccccccCCCCccCCcceeeEEeecce
Q 022313 66 VPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERY 145 (299)
Q Consensus 66 ~lG~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~ 145 (299)
.-|.|+++.+.+|+.+++..-+|+-- -||+|.+| +..|...... |...++.|++++.+++ .
T Consensus 89 ~~~~~a~~hl~~Va~GldS~V~GE~q-------I~gQvk~a----~~~a~~~~~~-------g~~l~~lf~~a~~~~k-~ 149 (417)
T TIGR01035 89 LTGESAVEHLFRVASGLDSMVVGETQ-------ILGQVKNA----YKVAQEEKTV-------GKVLERLFQKAFSVGK-R 149 (417)
T ss_pred cCchHHHHHHHHHHhhhhhhhcCChH-------HHHHHHHH----HHHHHHcCCc-------hHHHHHHHHHHHHHhh-h
Confidence 36889999999999988764444432 27777777 4455544332 4456788999988876 3
Q ss_pred EEEcCCCCCcccccccchhhHHHHHHhhhccCCCCCCEEEEEcCChHHHHHHHHHHHCC-CeEEEEeCCchHHHHHHHhc
Q 022313 146 CYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFG-LNVTVLSTSTSKKEEALSLL 224 (299)
Q Consensus 146 ~~~~p~~~~~~~aa~~~~~~~ta~~al~~~~~~~~g~~vlI~G~g~~G~~a~~~a~~~g-~~v~~~~~~~~~~~~~~~~~ 224 (299)
+..- ..++. ..++.+..+.-.+...... .++++|+|+|+|.+|..+++.+...| .+|+++.++.++.+.+.+++
T Consensus 150 vr~~-t~i~~---~~vSv~~~Av~la~~~~~~-l~~~~VlViGaG~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~ 224 (417)
T TIGR01035 150 VRTE-TDISA---GAVSISSAAVELAERIFGS-LKGKKALLIGAGEMGELVAKHLLRKGVGKILIANRTYERAEDLAKEL 224 (417)
T ss_pred hhhh-cCCCC---CCcCHHHHHHHHHHHHhCC-ccCCEEEEECChHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc
Confidence 3321 11111 1112222221122233333 67899999999999999999999999 48999999988877676778
Q ss_pred CCCEEEeCCCHHHHHHhcCCccEEEEcCCCchhH---HHHHHhcccC---cEEEEEcCC
Q 022313 225 GADKFVVSSDLEQMKALGKSLDFIIDTASGDHPF---DAYMSLLKVA---GVYVLVGFP 277 (299)
Q Consensus 225 g~~~v~~~~~~~~~~~~~~~~d~v~d~~g~~~~~---~~~~~~l~~~---G~~v~~g~~ 277 (299)
|... +.. +...+...++|+||.|++.+..+ ......+... -.+++++.+
T Consensus 225 g~~~-i~~---~~l~~~l~~aDvVi~aT~s~~~ii~~e~l~~~~~~~~~~~~viDla~P 279 (417)
T TIGR01035 225 GGEA-VKF---EDLEEYLAEADIVISSTGAPHPIVSKEDVERALRERTRPLFIIDIAVP 279 (417)
T ss_pred CCeE-eeH---HHHHHHHhhCCEEEECCCCCCceEcHHHHHHHHhcCCCCeEEEEeCCC
Confidence 7642 222 23334446899999999875422 2222222221 267788766
No 137
>PLN02494 adenosylhomocysteinase
Probab=98.24 E-value=1.2e-05 Score=74.32 Aligned_cols=101 Identities=19% Similarity=0.194 Sum_probs=78.9
Q ss_pred HHHhhhc-cCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEEeCCCHHHHHHhcCCccE
Q 022313 169 YTPMMRH-KMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDF 247 (299)
Q Consensus 169 ~~al~~~-~~~~~g~~vlI~G~g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~ 247 (299)
+.++.+. ...-.|++|+|+|.|.+|...++.++..|++|+++.+++.+..++ ...|...+ + +.+.....|+
T Consensus 241 ~d~i~r~t~i~LaGKtVvViGyG~IGr~vA~~aka~Ga~VIV~e~dp~r~~eA-~~~G~~vv-~------leEal~~ADV 312 (477)
T PLN02494 241 PDGLMRATDVMIAGKVAVICGYGDVGKGCAAAMKAAGARVIVTEIDPICALQA-LMEGYQVL-T------LEDVVSEADI 312 (477)
T ss_pred HHHHHHhcCCccCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCchhhHHH-HhcCCeec-c------HHHHHhhCCE
Confidence 4555444 334689999999999999999999999999999999888766555 35666432 1 2233356899
Q ss_pred EEEcCCCchh-HHHHHHhcccCcEEEEEcCC
Q 022313 248 IIDTASGDHP-FDAYMSLLKVAGVYVLVGFP 277 (299)
Q Consensus 248 v~d~~g~~~~-~~~~~~~l~~~G~~v~~g~~ 277 (299)
++++.|.... ....++.|++++.++.+|..
T Consensus 313 VI~tTGt~~vI~~e~L~~MK~GAiLiNvGr~ 343 (477)
T PLN02494 313 FVTTTGNKDIIMVDHMRKMKNNAIVCNIGHF 343 (477)
T ss_pred EEECCCCccchHHHHHhcCCCCCEEEEcCCC
Confidence 9999998774 47899999999999999985
No 138
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=98.24 E-value=5.2e-05 Score=66.63 Aligned_cols=99 Identities=20% Similarity=0.230 Sum_probs=76.1
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEEeCCCHHHHHHhcCCccEEEEcCCCchhH
Q 022313 179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHPF 258 (299)
Q Consensus 179 ~~g~~vlI~G~g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~v~d~~g~~~~~ 258 (299)
-.+++++|+|.|.+|..+++.++..|++|+++.+++++.+++ .++|...+ . .+.+.+...++|+|++++.....-
T Consensus 149 l~gk~v~IiG~G~iG~avA~~L~~~G~~V~v~~R~~~~~~~~-~~~g~~~~-~---~~~l~~~l~~aDiVint~P~~ii~ 223 (287)
T TIGR02853 149 IHGSNVMVLGFGRTGMTIARTFSALGARVFVGARSSADLARI-TEMGLIPF-P---LNKLEEKVAEIDIVINTIPALVLT 223 (287)
T ss_pred CCCCEEEEEcChHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHCCCeee-c---HHHHHHHhccCCEEEECCChHHhC
Confidence 467999999999999999999999999999999998877766 45665322 1 223444557899999999765433
Q ss_pred HHHHHhcccCcEEEEEcCC-Cceee
Q 022313 259 DAYMSLLKVAGVYVLVGFP-SKVKF 282 (299)
Q Consensus 259 ~~~~~~l~~~G~~v~~g~~-~~~~~ 282 (299)
...++.++++..+++++.. ...+|
T Consensus 224 ~~~l~~~k~~aliIDlas~Pg~tdf 248 (287)
T TIGR02853 224 ADVLSKLPKHAVIIDLASKPGGTDF 248 (287)
T ss_pred HHHHhcCCCCeEEEEeCcCCCCCCH
Confidence 5577889999999999876 45444
No 139
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=98.22 E-value=6.9e-06 Score=73.17 Aligned_cols=128 Identities=20% Similarity=0.210 Sum_probs=87.3
Q ss_pred eEEEcCCCCCcccccccchhhHHHHHHhhhccCC---CCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCchHHHHH
Q 022313 145 YCYKIANDYPLALAAPLLCAGITVYTPMMRHKMN---QPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEA 220 (299)
Q Consensus 145 ~~~~~p~~~~~~~aa~~~~~~~ta~~al~~~~~~---~~g~~vlI~G~g~~G~~a~~~a~~~g~-~v~~~~~~~~~~~~~ 220 (299)
..+++|+.+..+.++... +...++.+++..... -++.+|+|+|+|.+|..+++.++..|+ +|+++.++.++.+.+
T Consensus 140 ~a~~~~k~vr~et~i~~~-~~sv~~~Av~~a~~~~~~l~~~~V~ViGaG~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~l 218 (311)
T cd05213 140 KAIKVGKRVRTETGISRG-AVSISSAAVELAEKIFGNLKGKKVLVIGAGEMGELAAKHLAAKGVAEITIANRTYERAEEL 218 (311)
T ss_pred HHHHHHHHHhhhcCCCCC-CcCHHHHHHHHHHHHhCCccCCEEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHH
Confidence 466778888777776543 445555565544331 478999999999999999999998775 899999998888777
Q ss_pred HHhcCCCEEEeCCCHHHHHHhcCCccEEEEcCCCchh---HHHHHHhcc-cCcEEEEEcCC
Q 022313 221 LSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHP---FDAYMSLLK-VAGVYVLVGFP 277 (299)
Q Consensus 221 ~~~~g~~~v~~~~~~~~~~~~~~~~d~v~d~~g~~~~---~~~~~~~l~-~~G~~v~~g~~ 277 (299)
++++|.. +++. +...+.-...|+||.+++.+.. ....+.... ++-.+++++.+
T Consensus 219 a~~~g~~-~~~~---~~~~~~l~~aDvVi~at~~~~~~~~~~~~~~~~~~~~~~viDlavP 275 (311)
T cd05213 219 AKELGGN-AVPL---DELLELLNEADVVISATGAPHYAKIVERAMKKRSGKPRLIVDLAVP 275 (311)
T ss_pred HHHcCCe-EEeH---HHHHHHHhcCCEEEECCCCCchHHHHHHHHhhCCCCCeEEEEeCCC
Confidence 7888873 3332 2233334668999999998874 222222222 12256677776
No 140
>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional
Probab=98.14 E-value=2.2e-06 Score=82.68 Aligned_cols=97 Identities=20% Similarity=0.184 Sum_probs=65.5
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCC---------------------chHHHHHHHhcCCCEEEeCCC-H
Q 022313 178 NQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTS---------------------TSKKEEALSLLGADKFVVSSD-L 235 (299)
Q Consensus 178 ~~~g~~vlI~G~g~~G~~a~~~a~~~g~~v~~~~~~---------------------~~~~~~~~~~~g~~~v~~~~~-~ 235 (299)
.++|++|+|+|+|+.|+.+++.++..|++|++++.. +.+++.+ +++|++..++... .
T Consensus 134 ~~~g~~V~VIGaGpaGL~aA~~l~~~G~~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~-~~~Gv~~~~~~~~~~ 212 (564)
T PRK12771 134 PDTGKRVAVIGGGPAGLSAAYHLRRMGHAVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRI-LDLGVEVRLGVRVGE 212 (564)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHH-HHCCCEEEeCCEECC
Confidence 478999999999999999999999999999998853 2344555 5789876665432 1
Q ss_pred H-HHHHhcCCccEEEEcCCCchhHHHHHHhcccCcEEEEEc
Q 022313 236 E-QMKALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVG 275 (299)
Q Consensus 236 ~-~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g 275 (299)
+ ...+...++|+||+++|........+......|.+..++
T Consensus 213 ~~~~~~~~~~~D~Vi~AtG~~~~~~~~i~g~~~~gv~~~~~ 253 (564)
T PRK12771 213 DITLEQLEGEFDAVFVAIGAQLGKRLPIPGEDAAGVLDAVD 253 (564)
T ss_pred cCCHHHHHhhCCEEEEeeCCCCCCcCCCCCCccCCcEEHHH
Confidence 1 122334579999999997643332333334444444433
No 141
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=98.07 E-value=7.1e-06 Score=63.84 Aligned_cols=96 Identities=19% Similarity=0.273 Sum_probs=68.7
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCchHHHHHHHhcCCC--EEEeCCCHHHHHHhcCCccEEEEcCCCc
Q 022313 179 QPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGAD--KFVVSSDLEQMKALGKSLDFIIDTASGD 255 (299)
Q Consensus 179 ~~g~~vlI~G~g~~G~~a~~~a~~~g~-~v~~~~~~~~~~~~~~~~~g~~--~v~~~~~~~~~~~~~~~~d~v~d~~g~~ 255 (299)
-++++++|+|+|+.|.+++..+...|+ +++++.|+.++.+.+.++++.. .++...+.. +....+|+|+++++..
T Consensus 10 l~~~~vlviGaGg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~~~~---~~~~~~DivI~aT~~~ 86 (135)
T PF01488_consen 10 LKGKRVLVIGAGGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLEDLE---EALQEADIVINATPSG 86 (135)
T ss_dssp GTTSEEEEESSSHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGGGHC---HHHHTESEEEE-SSTT
T ss_pred cCCCEEEEECCHHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHHHHH---HHHhhCCeEEEecCCC
Confidence 478999999999999999999999999 5999999999999988888532 233443322 2336799999998875
Q ss_pred h--hHHHHHHhccc-CcEEEEEcCC
Q 022313 256 H--PFDAYMSLLKV-AGVYVLVGFP 277 (299)
Q Consensus 256 ~--~~~~~~~~l~~-~G~~v~~g~~ 277 (299)
. .....+....+ -+.+++++.+
T Consensus 87 ~~~i~~~~~~~~~~~~~~v~Dla~P 111 (135)
T PF01488_consen 87 MPIITEEMLKKASKKLRLVIDLAVP 111 (135)
T ss_dssp STSSTHHHHTTTCHHCSEEEES-SS
T ss_pred CcccCHHHHHHHHhhhhceeccccC
Confidence 3 22333333322 2588888876
No 142
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=98.05 E-value=6.4e-05 Score=69.73 Aligned_cols=123 Identities=14% Similarity=0.198 Sum_probs=86.0
Q ss_pred EEEcCCCCCccccc-ccchhhHHHHHHhh-hccCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHh
Q 022313 146 CYKIANDYPLALAA-PLLCAGITVYTPMM-RHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL 223 (299)
Q Consensus 146 ~~~~p~~~~~~~aa-~~~~~~~ta~~al~-~~~~~~~g~~vlI~G~g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~ 223 (299)
++.+|+...-..+- .+.+ ..+.+.++. .....-.|++|+|+|.|.+|...++.++..|++|+++.+++.+...+ ..
T Consensus 218 V~nv~d~~tk~~aD~~~G~-~~s~~d~~~R~~~~~LaGKtVgVIG~G~IGr~vA~rL~a~Ga~ViV~e~dp~~a~~A-~~ 295 (476)
T PTZ00075 218 AINVNDSVTKSKFDNIYGC-RHSLIDGIFRATDVMIAGKTVVVCGYGDVGKGCAQALRGFGARVVVTEIDPICALQA-AM 295 (476)
T ss_pred EEEeCCcchHHHHHHHHHH-HHHHHHHHHHhcCCCcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCchhHHHH-Hh
Confidence 55566654333222 1222 222234433 33344689999999999999999999999999999998877665454 34
Q ss_pred cCCCEEEeCCCHHHHHHhcCCccEEEEcCCCchhHH-HHHHhcccCcEEEEEcCC
Q 022313 224 LGADKFVVSSDLEQMKALGKSLDFIIDTASGDHPFD-AYMSLLKVAGVYVLVGFP 277 (299)
Q Consensus 224 ~g~~~v~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~-~~~~~l~~~G~~v~~g~~ 277 (299)
.|+..+ .+.++....|+|+.++|....+. ..+..|++++.++.+|..
T Consensus 296 ~G~~~~-------~leell~~ADIVI~atGt~~iI~~e~~~~MKpGAiLINvGr~ 343 (476)
T PTZ00075 296 EGYQVV-------TLEDVVETADIFVTATGNKDIITLEHMRRMKNNAIVGNIGHF 343 (476)
T ss_pred cCceec-------cHHHHHhcCCEEEECCCcccccCHHHHhccCCCcEEEEcCCC
Confidence 565322 13344568999999999877664 799999999999999876
No 143
>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed
Probab=98.01 E-value=9.5e-05 Score=63.79 Aligned_cols=129 Identities=16% Similarity=0.198 Sum_probs=82.7
Q ss_pred ceeeEEeecceEEEcCCCCCcccccccchhhHHHHHHhhhccCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCC
Q 022313 135 YSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTS 213 (299)
Q Consensus 135 ~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~al~~~~~~~~g~~vlI~G~g~~G~~a~~~a~~~g~-~v~~~~~~ 213 (299)
|.++.. +...++.+++++++..+..-... . ....+... +.++++||-+|+|. |..++.+++ .|+ +|++++.+
T Consensus 79 ~~~~~~-~~~~~i~i~p~~afgtg~h~tt~-~-~l~~l~~~--~~~~~~VLDiGcGs-G~l~i~~~~-~g~~~v~giDis 151 (250)
T PRK00517 79 WEDPPD-PDEINIELDPGMAFGTGTHPTTR-L-CLEALEKL--VLPGKTVLDVGCGS-GILAIAAAK-LGAKKVLAVDID 151 (250)
T ss_pred CcCCCC-CCeEEEEECCCCccCCCCCHHHH-H-HHHHHHhh--cCCCCEEEEeCCcH-HHHHHHHHH-cCCCeEEEEECC
Confidence 444433 55678889988887765422211 1 12222222 36889999999987 888876555 566 69999999
Q ss_pred chHHHHHHHhc---CC-CEEEeCCCHHHHHHhcCCccEEEEcCCCch---hHHHHHHhcccCcEEEEEcCC
Q 022313 214 TSKKEEALSLL---GA-DKFVVSSDLEQMKALGKSLDFIIDTASGDH---PFDAYMSLLKVAGVYVLVGFP 277 (299)
Q Consensus 214 ~~~~~~~~~~~---g~-~~v~~~~~~~~~~~~~~~~d~v~d~~g~~~---~~~~~~~~l~~~G~~v~~g~~ 277 (299)
+...+.+.+.+ +. +.+.... ....||+|+.+..... .+..+.+.|+++|+++..|..
T Consensus 152 ~~~l~~A~~n~~~~~~~~~~~~~~-------~~~~fD~Vvani~~~~~~~l~~~~~~~LkpgG~lilsgi~ 215 (250)
T PRK00517 152 PQAVEAARENAELNGVELNVYLPQ-------GDLKADVIVANILANPLLELAPDLARLLKPGGRLILSGIL 215 (250)
T ss_pred HHHHHHHHHHHHHcCCCceEEEcc-------CCCCcCEEEEcCcHHHHHHHHHHHHHhcCCCcEEEEEECc
Confidence 88887764433 22 1111000 0116999997766432 356778899999999999876
No 144
>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]
Probab=97.93 E-value=8.7e-05 Score=64.29 Aligned_cols=98 Identities=20% Similarity=0.232 Sum_probs=81.1
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEEeCCCHHHHHHhcCCccEEEEcCC------
Q 022313 180 PGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTAS------ 253 (299)
Q Consensus 180 ~g~~vlI~G~g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~v~d~~g------ 253 (299)
+..+|.|+|.|.+|.-++.+|..+|++|++.+.+.+|++++...|+.....-+.++..+.+.-.+.|++|.++=
T Consensus 167 ~~~kv~iiGGGvvgtnaAkiA~glgA~Vtild~n~~rl~~ldd~f~~rv~~~~st~~~iee~v~~aDlvIgaVLIpgaka 246 (371)
T COG0686 167 LPAKVVVLGGGVVGTNAAKIAIGLGADVTILDLNIDRLRQLDDLFGGRVHTLYSTPSNIEEAVKKADLVIGAVLIPGAKA 246 (371)
T ss_pred CCccEEEECCccccchHHHHHhccCCeeEEEecCHHHHhhhhHhhCceeEEEEcCHHHHHHHhhhccEEEEEEEecCCCC
Confidence 44567888999999999999999999999999999999999877886645567777788887789999987542
Q ss_pred CchhHHHHHHhcccCcEEEEEcCC
Q 022313 254 GDHPFDAYMSLLKVAGVYVLVGFP 277 (299)
Q Consensus 254 ~~~~~~~~~~~l~~~G~~v~~g~~ 277 (299)
.....+...+.|++++.++++..-
T Consensus 247 PkLvt~e~vk~MkpGsVivDVAiD 270 (371)
T COG0686 247 PKLVTREMVKQMKPGSVIVDVAID 270 (371)
T ss_pred ceehhHHHHHhcCCCcEEEEEEEc
Confidence 233678889999999999988643
No 145
>PRK08324 short chain dehydrogenase; Validated
Probab=97.92 E-value=0.0001 Score=72.73 Aligned_cols=131 Identities=21% Similarity=0.238 Sum_probs=85.1
Q ss_pred cceeeEEeecceEEEcCCCCCcccccccchhhHHHHHHhhhc--cCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEE
Q 022313 134 GYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRH--KMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVL 210 (299)
Q Consensus 134 ~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~al~~~--~~~~~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~ 210 (299)
++.+|..+++..++.+ +.++.+++. +... ....+++++||.|+ |++|...++.+...|++|+++
T Consensus 386 ~~~~~~~l~~~~~f~i-~~~~~e~a~------------l~~~~~~~~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~ 452 (681)
T PRK08324 386 AVGRYEPLSEQEAFDI-EYWSLEQAK------------LQRMPKPKPLAGKVALVTGAAGGIGKATAKRLAAEGACVVLA 452 (681)
T ss_pred hcCCccCCChhhhcce-eeehhhhhh------------hhcCCCCcCCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEE
Confidence 3455666665555555 444444442 1111 11146799999997 999999999999999999999
Q ss_pred eCCchHHHHHHHhcCC--C---EEEeCCCHHHHHHh-------cCCccEEEEcCCCc-----------------------
Q 022313 211 STSTSKKEEALSLLGA--D---KFVVSSDLEQMKAL-------GKSLDFIIDTASGD----------------------- 255 (299)
Q Consensus 211 ~~~~~~~~~~~~~~g~--~---~v~~~~~~~~~~~~-------~~~~d~v~d~~g~~----------------------- 255 (299)
+++.++.+.+.++++. . ...|..+.+.+.++ .+++|++|+++|..
T Consensus 453 ~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g 532 (681)
T PRK08324 453 DLDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATG 532 (681)
T ss_pred eCCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHH
Confidence 9998887776555543 1 12244444443322 25899999999831
Q ss_pred --hhHHHHHHhccc---CcEEEEEcCC
Q 022313 256 --HPFDAYMSLLKV---AGVYVLVGFP 277 (299)
Q Consensus 256 --~~~~~~~~~l~~---~G~~v~~g~~ 277 (299)
...+.+++.++. +|+++.++..
T Consensus 533 ~~~l~~~~~~~l~~~~~~g~iV~vsS~ 559 (681)
T PRK08324 533 HFLVAREAVRIMKAQGLGGSIVFIASK 559 (681)
T ss_pred HHHHHHHHHHHHHhcCCCcEEEEECCc
Confidence 124445666665 6899999876
No 146
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=97.85 E-value=0.00013 Score=61.31 Aligned_cols=75 Identities=20% Similarity=0.260 Sum_probs=60.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCC----CEEEeCCCHHHHHH----h---cCCccE
Q 022313 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGA----DKFVVSSDLEQMKA----L---GKSLDF 247 (299)
Q Consensus 180 ~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~----~~v~~~~~~~~~~~----~---~~~~d~ 247 (299)
+++.++|.|+ +++|.+.++.....|++|+++.|..+++++++.+++. ...+|-.+.+.+.. + -+.+|+
T Consensus 5 ~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iDi 84 (246)
T COG4221 5 KGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGRIDI 84 (246)
T ss_pred CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCcccE
Confidence 4578899998 8999999999999999999999999999999999983 22345555544222 2 378999
Q ss_pred EEEcCCC
Q 022313 248 IIDTASG 254 (299)
Q Consensus 248 v~d~~g~ 254 (299)
++++.|-
T Consensus 85 LvNNAGl 91 (246)
T COG4221 85 LVNNAGL 91 (246)
T ss_pred EEecCCC
Confidence 9999993
No 147
>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=97.83 E-value=0.00017 Score=59.50 Aligned_cols=119 Identities=23% Similarity=0.274 Sum_probs=79.7
Q ss_pred CCcccccccchhhHHHHHHhhhccCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCchHHHHH---HHhcCCCEE
Q 022313 153 YPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEA---LSLLGADKF 229 (299)
Q Consensus 153 ~~~~~aa~~~~~~~ta~~al~~~~~~~~g~~vlI~G~g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~---~~~~g~~~v 229 (299)
++....-.++.+...| .+++... ++++++||-+|+|+ |+.++-+++..+ +|+.+.+.++-.+.+ .+.+|.+.|
T Consensus 47 lpi~~gqtis~P~~vA-~m~~~L~-~~~g~~VLEIGtGs-GY~aAvla~l~~-~V~siEr~~~L~~~A~~~L~~lg~~nV 122 (209)
T COG2518 47 LPIGCGQTISAPHMVA-RMLQLLE-LKPGDRVLEIGTGS-GYQAAVLARLVG-RVVSIERIEELAEQARRNLETLGYENV 122 (209)
T ss_pred ccCCCCceecCcHHHH-HHHHHhC-CCCCCeEEEECCCc-hHHHHHHHHHhC-eEEEEEEcHHHHHHHHHHHHHcCCCce
Confidence 3333333444343333 2344444 49999999999975 999999999888 999999887754444 256776443
Q ss_pred EeCCCHHHHHHh-cCCccEEEEcCCCchhHHHHHHhcccCcEEEEE-c
Q 022313 230 VVSSDLEQMKAL-GKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLV-G 275 (299)
Q Consensus 230 ~~~~~~~~~~~~-~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~-g 275 (299)
.........-+. ..+||.|+-+.+.+..-...+++|+++|+++.. |
T Consensus 123 ~v~~gDG~~G~~~~aPyD~I~Vtaaa~~vP~~Ll~QL~~gGrlv~PvG 170 (209)
T COG2518 123 TVRHGDGSKGWPEEAPYDRIIVTAAAPEVPEALLDQLKPGGRLVIPVG 170 (209)
T ss_pred EEEECCcccCCCCCCCcCEEEEeeccCCCCHHHHHhcccCCEEEEEEc
Confidence 322211111111 268999999988888778999999999999865 5
No 148
>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed
Probab=97.82 E-value=0.00014 Score=63.47 Aligned_cols=100 Identities=19% Similarity=0.295 Sum_probs=68.8
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHCCC--eEEEEeCCchHHHHHHHh---cCCCEEE-eCCCHHHHHHhcCCccEEEE
Q 022313 177 MNQPGKSLGVIGLGGLGHMAVKFGKAFGL--NVTVLSTSTSKKEEALSL---LGADKFV-VSSDLEQMKALGKSLDFIID 250 (299)
Q Consensus 177 ~~~~g~~vlI~G~g~~G~~a~~~a~~~g~--~v~~~~~~~~~~~~~~~~---~g~~~v~-~~~~~~~~~~~~~~~d~v~d 250 (299)
.++++++||.+|+|. |..+.++++..+. +|++++.+++.++.+++. .+.+.+- ...+.+.+....+.||+|+.
T Consensus 74 ~~~~g~~VLDiG~G~-G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v~~~~~d~~~l~~~~~~fD~Vi~ 152 (272)
T PRK11873 74 ELKPGETVLDLGSGG-GFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNVEFRLGEIEALPVADNSVDVIIS 152 (272)
T ss_pred cCCCCCEEEEeCCCC-CHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCCCEEEEEcchhhCCCCCCceeEEEE
Confidence 358999999999987 8888888887765 799999998888777432 3432221 11111111111357999986
Q ss_pred cC------CCchhHHHHHHhcccCcEEEEEcCC
Q 022313 251 TA------SGDHPFDAYMSLLKVAGVYVLVGFP 277 (299)
Q Consensus 251 ~~------g~~~~~~~~~~~l~~~G~~v~~g~~ 277 (299)
.. .....++.+.+.|+++|+++..+..
T Consensus 153 ~~v~~~~~d~~~~l~~~~r~LkpGG~l~i~~~~ 185 (272)
T PRK11873 153 NCVINLSPDKERVFKEAFRVLKPGGRFAISDVV 185 (272)
T ss_pred cCcccCCCCHHHHHHHHHHHcCCCcEEEEEEee
Confidence 53 2234688999999999999987655
No 149
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.82 E-value=0.00033 Score=57.62 Aligned_cols=108 Identities=21% Similarity=0.160 Sum_probs=80.3
Q ss_pred CCCCEEEEEcC--ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcC-CCEEEeCCCHHHHHHh--------cCCccE
Q 022313 179 QPGKSLGVIGL--GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLG-ADKFVVSSDLEQMKAL--------GKSLDF 247 (299)
Q Consensus 179 ~~g~~vlI~G~--g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g-~~~v~~~~~~~~~~~~--------~~~~d~ 247 (299)
...+.|||.|+ |++|.+.+.-..+.|+.|+++.|.-+...++..++| ...-++..+++.+.+. .++.|+
T Consensus 5 ~~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld~ 84 (289)
T KOG1209|consen 5 SQPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLDL 84 (289)
T ss_pred cCCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCCceEE
Confidence 45678999875 899999999999999999999999999999976888 3334455555554433 267899
Q ss_pred EEEcCCCch--------------------------hHHHHHHhcccCcEEEEEcCC-CceeeChhh
Q 022313 248 IIDTASGDH--------------------------PFDAYMSLLKVAGVYVLVGFP-SKVKFSPAS 286 (299)
Q Consensus 248 v~d~~g~~~--------------------------~~~~~~~~l~~~G~~v~~g~~-~~~~~~~~~ 286 (299)
.++++|.+- +-.-.....+..|+++.+|+. ..+++++..
T Consensus 85 L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~~vpfpf~~ 150 (289)
T KOG1209|consen 85 LYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAGVVPFPFGS 150 (289)
T ss_pred EEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeEEeccchhh
Confidence 999888431 111123466788999999999 777777753
No 150
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=97.76 E-value=0.00065 Score=63.19 Aligned_cols=181 Identities=18% Similarity=0.193 Sum_probs=108.8
Q ss_pred cccccccEEEEEecCCCCCcccCCEEEEeccccCCCCCccccCCCCccccccccccccccCCCCccCCcceeeEEeecce
Q 022313 66 VPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERY 145 (299)
Q Consensus 66 ~lG~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~ 145 (299)
.-|+|+++.+.+|+.+++..-+|+.-+ |.+|+ ..+..|...... |...++.|++.+.+++
T Consensus 91 ~~g~ea~~hl~~V~~GldS~V~GE~qI----------lgQvk-~a~~~a~~~g~~-------g~~l~~lf~~a~~~~k-- 150 (423)
T PRK00045 91 HEGEEAVRHLFRVASGLDSMVLGEPQI----------LGQVK-DAYALAQEAGTV-------GTILNRLFQKAFSVAK-- 150 (423)
T ss_pred cCCHHHHHHHHHHHhhhhhhhcCChHH----------HHHHH-HHHHHHHHcCCc-------hHHHHHHHHHHHHHHh--
Confidence 369999999999999888755555421 23333 222233322211 3344566666554443
Q ss_pred EEEcCCCCCcccccccchhhHHHHHHhhhccC---CCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCchHHHHHH
Q 022313 146 CYKIANDYPLALAAPLLCAGITVYTPMMRHKM---NQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEAL 221 (299)
Q Consensus 146 ~~~~p~~~~~~~aa~~~~~~~ta~~al~~~~~---~~~g~~vlI~G~g~~G~~a~~~a~~~g~-~v~~~~~~~~~~~~~~ 221 (299)
.+..+.+. ...+...++.+++.... -.++++|+|+|+|.+|.++++.++..|+ +|+++.++.++.+.+.
T Consensus 151 ------~v~~~t~i-~~~~~Sv~~~Av~~a~~~~~~~~~~~vlViGaG~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la 223 (423)
T PRK00045 151 ------RVRTETGI-GAGAVSVASAAVELAKQIFGDLSGKKVLVIGAGEMGELVAKHLAEKGVRKITVANRTLERAEELA 223 (423)
T ss_pred ------hHhhhcCC-CCCCcCHHHHHHHHHHHhhCCccCCEEEEECchHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHH
Confidence 22211111 11123333444443321 1578999999999999999999999998 8999999988887776
Q ss_pred HhcCCCEEEeCCCHHHHHHhcCCccEEEEcCCCchhH---HHHHHhcc----cCcEEEEEcCC
Q 022313 222 SLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHPF---DAYMSLLK----VAGVYVLVGFP 277 (299)
Q Consensus 222 ~~~g~~~v~~~~~~~~~~~~~~~~d~v~d~~g~~~~~---~~~~~~l~----~~G~~v~~g~~ 277 (299)
+++|.+ +++. +...+...++|+||++++.+..+ ...-..++ ..-.+++++.+
T Consensus 224 ~~~g~~-~~~~---~~~~~~l~~aDvVI~aT~s~~~~i~~~~l~~~~~~~~~~~~vviDla~P 282 (423)
T PRK00045 224 EEFGGE-AIPL---DELPEALAEADIVISSTGAPHPIIGKGMVERALKARRHRPLLLVDLAVP 282 (423)
T ss_pred HHcCCc-EeeH---HHHHHHhccCCEEEECCCCCCcEEcHHHHHHHHhhccCCCeEEEEeCCC
Confidence 788864 3332 23333346899999999975422 12222221 12356778776
No 151
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=97.65 E-value=0.00043 Score=62.82 Aligned_cols=96 Identities=25% Similarity=0.292 Sum_probs=75.4
Q ss_pred CEEEEEcCChHHHHHHHHHHHCC-CeEEEEeCCchHHHHHHHhcC---CCEEEeCCCHHHHHHhcCCccEEEEcCCCchh
Q 022313 182 KSLGVIGLGGLGHMAVKFGKAFG-LNVTVLSTSTSKKEEALSLLG---ADKFVVSSDLEQMKALGKSLDFIIDTASGDHP 257 (299)
Q Consensus 182 ~~vlI~G~g~~G~~a~~~a~~~g-~~v~~~~~~~~~~~~~~~~~g---~~~v~~~~~~~~~~~~~~~~d~v~d~~g~~~~ 257 (299)
.+|||+|+|.+|+.+++.+.+.+ .+|++.+|+.++.+++....+ -...++-.+.+.+.++-+++|+||++......
T Consensus 2 ~~ilviGaG~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~~al~~li~~~d~VIn~~p~~~~ 81 (389)
T COG1748 2 MKILVIGAGGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAADVDALVALIKDFDLVINAAPPFVD 81 (389)
T ss_pred CcEEEECCchhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccChHHHHHHHhcCCEEEEeCCchhh
Confidence 47999999999999999988888 699999999999888854432 23455666777777777888999999998875
Q ss_pred HHHHHHhcccCcEEEEEcCC
Q 022313 258 FDAYMSLLKVAGVYVLVGFP 277 (299)
Q Consensus 258 ~~~~~~~l~~~G~~v~~g~~ 277 (299)
...+-.|++.+=.++++...
T Consensus 82 ~~i~ka~i~~gv~yvDts~~ 101 (389)
T COG1748 82 LTILKACIKTGVDYVDTSYY 101 (389)
T ss_pred HHHHHHHHHhCCCEEEcccC
Confidence 65555677777777777655
No 152
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=97.54 E-value=0.00095 Score=54.31 Aligned_cols=91 Identities=27% Similarity=0.209 Sum_probs=68.2
Q ss_pred EEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEE-eCCCHHHHHHhcCCccEEEEcCCC----chh
Q 022313 184 LGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFV-VSSDLEQMKALGKSLDFIIDTASG----DHP 257 (299)
Q Consensus 184 vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~-~~~~~~~~~~~~~~~d~v~d~~g~----~~~ 257 (299)
|+|+|+ |.+|...++.+...|.+|++++|++++.+. ..+.+.+. +..+.+.+.+.-.++|.||.+++. ...
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~---~~~~~~~~~d~~d~~~~~~al~~~d~vi~~~~~~~~~~~~ 77 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED---SPGVEIIQGDLFDPDSVKAALKGADAVIHAAGPPPKDVDA 77 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH---CTTEEEEESCTTCHHHHHHHHTTSSEEEECCHSTTTHHHH
T ss_pred eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc---ccccccceeeehhhhhhhhhhhhcchhhhhhhhhcccccc
Confidence 689998 999999999999999999999999987765 33444332 455666677666799999999984 223
Q ss_pred HHHHHHhcccCc--EEEEEcCC
Q 022313 258 FDAYMSLLKVAG--VYVLVGFP 277 (299)
Q Consensus 258 ~~~~~~~l~~~G--~~v~~g~~ 277 (299)
....++.++..| +++.++..
T Consensus 78 ~~~~~~a~~~~~~~~~v~~s~~ 99 (183)
T PF13460_consen 78 AKNIIEAAKKAGVKRVVYLSSA 99 (183)
T ss_dssp HHHHHHHHHHTTSSEEEEEEET
T ss_pred cccccccccccccccceeeecc
Confidence 556666665554 77777655
No 153
>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional
Probab=97.54 E-value=0.0021 Score=53.36 Aligned_cols=97 Identities=16% Similarity=0.198 Sum_probs=68.5
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHCC--CeEEEEeCCchHHHHHH---HhcC-CCE--EEeCCCHHHHHHhcCCccEE
Q 022313 177 MNQPGKSLGVIGLGGLGHMAVKFGKAFG--LNVTVLSTSTSKKEEAL---SLLG-ADK--FVVSSDLEQMKALGKSLDFI 248 (299)
Q Consensus 177 ~~~~g~~vlI~G~g~~G~~a~~~a~~~g--~~v~~~~~~~~~~~~~~---~~~g-~~~--v~~~~~~~~~~~~~~~~d~v 248 (299)
.+.++++|+-+|+|. |..++.+++..+ .+|++++.+++..+.++ ++++ .+. ++..+..+.+......+|.|
T Consensus 37 ~~~~~~~vlDlG~Gt-G~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~~~d~~~~l~~~~~~~D~V 115 (198)
T PRK00377 37 RLRKGDMILDIGCGT-GSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLIKGEAPEILFTINEKFDRI 115 (198)
T ss_pred CCCCcCEEEEeCCcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEEEechhhhHhhcCCCCCEE
Confidence 348999999999987 888888888764 48999999988776553 3455 232 33333333344455789999
Q ss_pred EEcCCC---chhHHHHHHhcccCcEEEEE
Q 022313 249 IDTASG---DHPFDAYMSLLKVAGVYVLV 274 (299)
Q Consensus 249 ~d~~g~---~~~~~~~~~~l~~~G~~v~~ 274 (299)
|...+. ...+..+.+.|+++|+++..
T Consensus 116 ~~~~~~~~~~~~l~~~~~~LkpgG~lv~~ 144 (198)
T PRK00377 116 FIGGGSEKLKEIISASWEIIKKGGRIVID 144 (198)
T ss_pred EECCCcccHHHHHHHHHHHcCCCcEEEEE
Confidence 986543 23477788899999999863
No 154
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=97.53 E-value=0.0014 Score=62.49 Aligned_cols=100 Identities=15% Similarity=0.135 Sum_probs=69.6
Q ss_pred CCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhc--------CC-----CEE--EeCCCHHHHHHh
Q 022313 178 NQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL--------GA-----DKF--VVSSDLEQMKAL 241 (299)
Q Consensus 178 ~~~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~--------g~-----~~v--~~~~~~~~~~~~ 241 (299)
.+.++++||+|+ |.+|...++.+...|++|++++|+.++.+.+.+++ |. ..+ .+..+.+.+.+.
T Consensus 77 ~~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~a 156 (576)
T PLN03209 77 TKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPA 156 (576)
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHH
Confidence 478999999998 99999999999999999999999988776553321 21 112 245555566555
Q ss_pred cCCccEEEEcCCCch---------------hHHHHHHhccc--CcEEEEEcCC
Q 022313 242 GKSLDFIIDTASGDH---------------PFDAYMSLLKV--AGVYVLVGFP 277 (299)
Q Consensus 242 ~~~~d~v~d~~g~~~---------------~~~~~~~~l~~--~G~~v~~g~~ 277 (299)
-+++|+||.++|... ....+++.+.. .++||.++..
T Consensus 157 LggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSi 209 (576)
T PLN03209 157 LGNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSL 209 (576)
T ss_pred hcCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccc
Confidence 578999999988531 12223344333 3689988776
No 155
>PRK12742 oxidoreductase; Provisional
Probab=97.53 E-value=0.0019 Score=54.71 Aligned_cols=98 Identities=21% Similarity=0.208 Sum_probs=66.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeC-CchHHHHHHHhcCCCEE-EeCCCHHHHHHh---cCCccEEEEcCC
Q 022313 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLST-STSKKEEALSLLGADKF-VVSSDLEQMKAL---GKSLDFIIDTAS 253 (299)
Q Consensus 180 ~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~-~~~~~~~~~~~~g~~~v-~~~~~~~~~~~~---~~~~d~v~d~~g 253 (299)
+++++||.|+ |++|...++.+...|++|+++.+ ++++.+++.++++...+ .|..+.+.+.+. .+++|+++++.|
T Consensus 5 ~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~li~~ag 84 (237)
T PRK12742 5 TGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQETGATAVQTDSADRDAVIDVVRKSGALDILVVNAG 84 (237)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHhCCeEEecCCCCHHHHHHHHHHhCCCcEEEECCC
Confidence 4689999998 99999999999999999888765 44555555455665433 244444443332 256899999987
Q ss_pred Cch-------------------------hHHHHHHhcccCcEEEEEcCC
Q 022313 254 GDH-------------------------PFDAYMSLLKVAGVYVLVGFP 277 (299)
Q Consensus 254 ~~~-------------------------~~~~~~~~l~~~G~~v~~g~~ 277 (299)
... ....+++.++.+|+++.++..
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~ 133 (237)
T PRK12742 85 IAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSV 133 (237)
T ss_pred CCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEecc
Confidence 421 012344556678899988776
No 156
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.53 E-value=0.0014 Score=55.59 Aligned_cols=98 Identities=27% Similarity=0.333 Sum_probs=68.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhc---CCCEEE--eCCCHHHHHHh-------cCCcc
Q 022313 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL---GADKFV--VSSDLEQMKAL-------GKSLD 246 (299)
Q Consensus 180 ~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~---g~~~v~--~~~~~~~~~~~-------~~~~d 246 (299)
++++++|.|+ |.+|..+++.+...|++|+++++++++.+.+.++. +.-+.+ |..+.+.+.++ .+++|
T Consensus 4 ~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 83 (238)
T PRK05786 4 KGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAID 83 (238)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 4689999998 89999999999999999999999988776653333 222222 33344333221 25689
Q ss_pred EEEEcCCCch-----------------------hHHHHHHhcccCcEEEEEcCC
Q 022313 247 FIIDTASGDH-----------------------PFDAYMSLLKVAGVYVLVGFP 277 (299)
Q Consensus 247 ~v~d~~g~~~-----------------------~~~~~~~~l~~~G~~v~~g~~ 277 (299)
.++.+.+... ..+..++.++++|+++.++..
T Consensus 84 ~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~ 137 (238)
T PRK05786 84 GLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSM 137 (238)
T ss_pred EEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecc
Confidence 9999887421 144555667778999998876
No 157
>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A ....
Probab=97.51 E-value=0.00096 Score=49.58 Aligned_cols=93 Identities=24% Similarity=0.314 Sum_probs=65.4
Q ss_pred CCCEEEEEcCChHHHHHHHHHH-HCCCeEEEEeCCchHHHHHHHhc---C-CC--EEEeCCCHHHHHHhcCCccEEEEcC
Q 022313 180 PGKSLGVIGLGGLGHMAVKFGK-AFGLNVTVLSTSTSKKEEALSLL---G-AD--KFVVSSDLEQMKALGKSLDFIIDTA 252 (299)
Q Consensus 180 ~g~~vlI~G~g~~G~~a~~~a~-~~g~~v~~~~~~~~~~~~~~~~~---g-~~--~v~~~~~~~~~~~~~~~~d~v~d~~ 252 (299)
|+++||-+|+|. |..++.+++ ..+++|+.++.+++-.+.+.+.. + .+ .++..+- ........+||+|+...
T Consensus 1 p~~~vLDlGcG~-G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~-~~~~~~~~~~D~v~~~~ 78 (112)
T PF12847_consen 1 PGGRVLDLGCGT-GRLSIALARLFPGARVVGVDISPEMLEIARERAAEEGLSDRITFVQGDA-EFDPDFLEPFDLVICSG 78 (112)
T ss_dssp TTCEEEEETTTT-SHHHHHHHHHHTTSEEEEEESSHHHHHHHHHHHHHTTTTTTEEEEESCC-HGGTTTSSCEEEEEECS
T ss_pred CCCEEEEEcCcC-CHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEECcc-ccCcccCCCCCEEEECC
Confidence 678999999875 777778887 46889999999999888886666 2 12 2233222 22223346899999877
Q ss_pred -CCc---------hhHHHHHHhcccCcEEEEE
Q 022313 253 -SGD---------HPFDAYMSLLKVAGVYVLV 274 (299)
Q Consensus 253 -g~~---------~~~~~~~~~l~~~G~~v~~ 274 (299)
... ..++.+.+.|+|+|+++..
T Consensus 79 ~~~~~~~~~~~~~~~l~~~~~~L~pgG~lvi~ 110 (112)
T PF12847_consen 79 FTLHFLLPLDERRRVLERIRRLLKPGGRLVIN 110 (112)
T ss_dssp GSGGGCCHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CccccccchhHHHHHHHHHHHhcCCCcEEEEE
Confidence 221 1367888999999998753
No 158
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=97.46 E-value=0.0019 Score=52.03 Aligned_cols=96 Identities=20% Similarity=0.244 Sum_probs=67.9
Q ss_pred cccchhhHHHHHHhhhccCCCCCCEEEEEcCCh-HHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEEeCCCHHH
Q 022313 159 APLLCAGITVYTPMMRHKMNQPGKSLGVIGLGG-LGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQ 237 (299)
Q Consensus 159 a~~~~~~~ta~~al~~~~~~~~g~~vlI~G~g~-~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~ 237 (299)
...||...++...++....--.+++++|+|+|. +|..++..++..|++|+++.++.+++..
T Consensus 22 ~~~p~~~~a~v~l~~~~~~~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~~~l~~------------------ 83 (168)
T cd01080 22 GFIPCTPAGILELLKRYGIDLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKTKNLKE------------------ 83 (168)
T ss_pred CccCChHHHHHHHHHHcCCCCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCchhHHH------------------
Confidence 445555555555555554336889999999986 6998999999999999988887433222
Q ss_pred HHHhcCCccEEEEcCCCchhHHHHHHhcccCcEEEEEcCC
Q 022313 238 MKALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP 277 (299)
Q Consensus 238 ~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~ 277 (299)
.-..+|+||.+++.+..+.. +.++++-.+++++.+
T Consensus 84 ---~l~~aDiVIsat~~~~ii~~--~~~~~~~viIDla~p 118 (168)
T cd01080 84 ---HTKQADIVIVAVGKPGLVKG--DMVKPGAVVIDVGIN 118 (168)
T ss_pred ---HHhhCCEEEEcCCCCceecH--HHccCCeEEEEccCC
Confidence 22568888988888663333 356777778888877
No 159
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=97.44 E-value=0.0034 Score=51.83 Aligned_cols=99 Identities=20% Similarity=0.126 Sum_probs=65.1
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcC----CCE-EEeCCCHHHHHHhcCCccEEEEcC
Q 022313 179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLG----ADK-FVVSSDLEQMKALGKSLDFIIDTA 252 (299)
Q Consensus 179 ~~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g----~~~-v~~~~~~~~~~~~~~~~d~v~d~~ 252 (299)
-++.+++|+|+ |.+|..++..+...|++|+++.|+.++.+.+.+++. ... ..+..+.+.+.+.-.+.|+||.++
T Consensus 26 l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~diVi~at 105 (194)
T cd01078 26 LKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAIKGADVVFAAG 105 (194)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHhcCCEEEECC
Confidence 46789999997 999999888888889999999999887777655442 221 223444455555557899999988
Q ss_pred CCchhHHHHH-HhcccCcEEEEEcCC
Q 022313 253 SGDHPFDAYM-SLLKVAGVYVLVGFP 277 (299)
Q Consensus 253 g~~~~~~~~~-~~l~~~G~~v~~g~~ 277 (299)
.......... ...+++-.++++..+
T Consensus 106 ~~g~~~~~~~~~~~~~~~vv~D~~~~ 131 (194)
T cd01078 106 AAGVELLEKLAWAPKPLAVAADVNAV 131 (194)
T ss_pred CCCceechhhhcccCceeEEEEccCC
Confidence 7654111112 233333346666555
No 160
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=97.44 E-value=0.00088 Score=57.73 Aligned_cols=76 Identities=24% Similarity=0.310 Sum_probs=58.5
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCC-----EEE--eCCCHHHHHHh-------cC
Q 022313 179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGAD-----KFV--VSSDLEQMKAL-------GK 243 (299)
Q Consensus 179 ~~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~-----~v~--~~~~~~~~~~~-------~~ 243 (299)
..+++++|.|+ +++|...+..+...|.+++++.|++++++++++++.-. +++ |..+.+.+..+ ..
T Consensus 4 ~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~~ 83 (265)
T COG0300 4 MKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERGG 83 (265)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcCC
Confidence 56789999998 89999999999999999999999999999887766521 233 33344443332 24
Q ss_pred CccEEEEcCCC
Q 022313 244 SLDFIIDTASG 254 (299)
Q Consensus 244 ~~d~v~d~~g~ 254 (299)
.+|+.++++|-
T Consensus 84 ~IdvLVNNAG~ 94 (265)
T COG0300 84 PIDVLVNNAGF 94 (265)
T ss_pred cccEEEECCCc
Confidence 79999999993
No 161
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=97.44 E-value=0.00089 Score=54.86 Aligned_cols=74 Identities=19% Similarity=0.213 Sum_probs=57.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcC--CCEEEeCCCHHHHH----Hh---cCCccEEE
Q 022313 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLG--ADKFVVSSDLEQMK----AL---GKSLDFII 249 (299)
Q Consensus 180 ~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g--~~~v~~~~~~~~~~----~~---~~~~d~v~ 249 (299)
-|.+|||.|+ +++|+..++-...+|-+||+..|+++++++++.... ...+.+-.|.+..+ ++ ....++++
T Consensus 4 tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~lNvli 83 (245)
T COG3967 4 TGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYPNLNVLI 83 (245)
T ss_pred cCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCCchheee
Confidence 4789999976 899999999999999999999999999999976665 34455555544333 33 24578888
Q ss_pred EcCC
Q 022313 250 DTAS 253 (299)
Q Consensus 250 d~~g 253 (299)
+++|
T Consensus 84 NNAG 87 (245)
T COG3967 84 NNAG 87 (245)
T ss_pred eccc
Confidence 8888
No 162
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=97.41 E-value=0.0015 Score=51.67 Aligned_cols=105 Identities=19% Similarity=0.234 Sum_probs=70.9
Q ss_pred HHhhhccCCCCCCEEEEEcCChHHHHHHHHHHHCC-CeEEEEeCCchHHHHHHHhcCCCE-EEeCCCHHHHHHhcCCccE
Q 022313 170 TPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFG-LNVTVLSTSTSKKEEALSLLGADK-FVVSSDLEQMKALGKSLDF 247 (299)
Q Consensus 170 ~al~~~~~~~~g~~vlI~G~g~~G~~a~~~a~~~g-~~v~~~~~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~~~d~ 247 (299)
.+++....-.++++++|+|+|.+|...++.+...| .+|++++++.++.+.+.++++... ..... ...+..+++|+
T Consensus 8 ~a~~~~~~~~~~~~i~iiG~G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dv 84 (155)
T cd01065 8 RALEEAGIELKGKKVLILGAGGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAYL---DLEELLAEADL 84 (155)
T ss_pred HHHHhhCCCCCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceeec---chhhccccCCE
Confidence 34444332255788999999999999999988886 689999999888877766766431 01111 12233478999
Q ss_pred EEEcCCCchh----HHHHHHhcccCcEEEEEcCC
Q 022313 248 IIDTASGDHP----FDAYMSLLKVAGVYVLVGFP 277 (299)
Q Consensus 248 v~d~~g~~~~----~~~~~~~l~~~G~~v~~g~~ 277 (299)
|+.+++.... .......++++..+++++..
T Consensus 85 vi~~~~~~~~~~~~~~~~~~~~~~~~~v~D~~~~ 118 (155)
T cd01065 85 IINTTPVGMKPGDELPLPPSLLKPGGVVYDVVYN 118 (155)
T ss_pred EEeCcCCCCCCCCCCCCCHHHcCCCCEEEEcCcC
Confidence 9999887541 11223456788888888665
No 163
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=97.40 E-value=0.0024 Score=50.79 Aligned_cols=106 Identities=16% Similarity=0.237 Sum_probs=70.4
Q ss_pred HHHhh-hccCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEEeCCCHHHHHHhcCCccE
Q 022313 169 YTPMM-RHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDF 247 (299)
Q Consensus 169 ~~al~-~~~~~~~g~~vlI~G~g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~ 247 (299)
+.++. ....+-.|++++|+|-|-+|...++.++.+|++|++++.++-+.-++. .-|.+.. .+.+.....|+
T Consensus 10 ~d~i~r~t~~~l~Gk~vvV~GYG~vG~g~A~~lr~~Ga~V~V~e~DPi~alqA~-~dGf~v~-------~~~~a~~~adi 81 (162)
T PF00670_consen 10 VDGIMRATNLMLAGKRVVVIGYGKVGKGIARALRGLGARVTVTEIDPIRALQAA-MDGFEVM-------TLEEALRDADI 81 (162)
T ss_dssp HHHHHHHH-S--TTSEEEEE--SHHHHHHHHHHHHTT-EEEEE-SSHHHHHHHH-HTT-EEE--------HHHHTTT-SE
T ss_pred HHHHHhcCceeeCCCEEEEeCCCcccHHHHHHHhhCCCEEEEEECChHHHHHhh-hcCcEec-------CHHHHHhhCCE
Confidence 33443 334457899999999999999999999999999999999987776662 3454322 34455678999
Q ss_pred EEEcCCCchh-HHHHHHhcccCcEEEEEcCC-Cceee
Q 022313 248 IIDTASGDHP-FDAYMSLLKVAGVYVLVGFP-SKVKF 282 (299)
Q Consensus 248 v~d~~g~~~~-~~~~~~~l~~~G~~v~~g~~-~~~~~ 282 (299)
++-++|.... ...-++.|+++..+..+|.. ...++
T Consensus 82 ~vtaTG~~~vi~~e~~~~mkdgail~n~Gh~d~Eid~ 118 (162)
T PF00670_consen 82 FVTATGNKDVITGEHFRQMKDGAILANAGHFDVEIDV 118 (162)
T ss_dssp EEE-SSSSSSB-HHHHHHS-TTEEEEESSSSTTSBTH
T ss_pred EEECCCCccccCHHHHHHhcCCeEEeccCcCceeEee
Confidence 9999998774 45778899988888887766 44433
No 164
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=97.39 E-value=0.0006 Score=55.64 Aligned_cols=90 Identities=24% Similarity=0.318 Sum_probs=60.2
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEEeCCCHHHHHHhcCCccEEEEcCCCc---
Q 022313 179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGD--- 255 (299)
Q Consensus 179 ~~g~~vlI~G~g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~v~d~~g~~--- 255 (299)
-.|++|.|+|.|.+|...++.++.+|.+|+++++........ ...+.. .. .+.++-...|+|+.+....
T Consensus 34 l~g~tvgIiG~G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~-~~~~~~----~~---~l~ell~~aDiv~~~~plt~~T 105 (178)
T PF02826_consen 34 LRGKTVGIIGYGRIGRAVARRLKAFGMRVIGYDRSPKPEEGA-DEFGVE----YV---SLDELLAQADIVSLHLPLTPET 105 (178)
T ss_dssp STTSEEEEESTSHHHHHHHHHHHHTT-EEEEEESSCHHHHHH-HHTTEE----ES---SHHHHHHH-SEEEE-SSSSTTT
T ss_pred cCCCEEEEEEEcCCcCeEeeeeecCCceeEEecccCChhhhc-ccccce----ee---ehhhhcchhhhhhhhhcccccc
Confidence 578999999999999999999999999999999998766533 344431 11 1222334467777766631
Q ss_pred --hhHHHHHHhcccCcEEEEEcC
Q 022313 256 --HPFDAYMSLLKVAGVYVLVGF 276 (299)
Q Consensus 256 --~~~~~~~~~l~~~G~~v~~g~ 276 (299)
..-...+..|+++..+|.++-
T Consensus 106 ~~li~~~~l~~mk~ga~lvN~aR 128 (178)
T PF02826_consen 106 RGLINAEFLAKMKPGAVLVNVAR 128 (178)
T ss_dssp TTSBSHHHHHTSTTTEEEEESSS
T ss_pred ceeeeeeeeeccccceEEEeccc
Confidence 124456677777777776653
No 165
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=97.38 E-value=0.0018 Score=56.83 Aligned_cols=77 Identities=22% Similarity=0.211 Sum_probs=56.0
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCchHHHHHHHhcCCC-EEEeCCCHHHHHHhcCCccEEEEcCCCc
Q 022313 179 QPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGAD-KFVVSSDLEQMKALGKSLDFIIDTASGD 255 (299)
Q Consensus 179 ~~g~~vlI~G~g~~G~~a~~~a~~~g~-~v~~~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~~~~~d~v~d~~g~~ 255 (299)
.++++++|+|+|+.+.+++..+...|+ +++++.|+.++.+.+.++++.. .+......+.+......+|+|++++...
T Consensus 123 ~~~k~vlvlGaGGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~~~~~~~~~~~~~DiVInaTp~g 201 (282)
T TIGR01809 123 LAGFRGLVIGAGGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLEGDSGGLAIEKAAEVLVSTVPAD 201 (282)
T ss_pred cCCceEEEEcCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceeccchhhhhhcccCCCEEEECCCCC
Confidence 357899999999999999999999998 8999999999888887776532 1111111112223336799999998753
No 166
>PRK08265 short chain dehydrogenase; Provisional
Probab=97.35 E-value=0.0043 Score=53.62 Aligned_cols=98 Identities=18% Similarity=0.139 Sum_probs=68.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCC-EE--EeCCCHHHHHHh-------cCCccEE
Q 022313 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGAD-KF--VVSSDLEQMKAL-------GKSLDFI 248 (299)
Q Consensus 180 ~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~-~v--~~~~~~~~~~~~-------~~~~d~v 248 (299)
++++++|.|+ |++|...++.+...|++|++++++.++.+++.++++.. .+ .|..+.+.+.++ .+.+|++
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~l 84 (261)
T PRK08265 5 AGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVARFGRVDIL 84 (261)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 4679999998 89999999999999999999999988777776666532 12 244444443322 2578999
Q ss_pred EEcCCCch------------------------hHHHHHHhc-ccCcEEEEEcCC
Q 022313 249 IDTASGDH------------------------PFDAYMSLL-KVAGVYVLVGFP 277 (299)
Q Consensus 249 ~d~~g~~~------------------------~~~~~~~~l-~~~G~~v~~g~~ 277 (299)
+.+.|... ..+.+++.+ +.+|+++.++..
T Consensus 85 v~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~ 138 (261)
T PRK08265 85 VNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSI 138 (261)
T ss_pred EECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECch
Confidence 99987410 122333444 567899988765
No 167
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.35 E-value=0.0024 Score=55.72 Aligned_cols=96 Identities=20% Similarity=0.247 Sum_probs=73.8
Q ss_pred cccchhhHHHHHHhhhccCCCCCCEEEEEcCC-hHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEEeCCCHHH
Q 022313 159 APLLCAGITVYTPMMRHKMNQPGKSLGVIGLG-GLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQ 237 (299)
Q Consensus 159 a~~~~~~~ta~~al~~~~~~~~g~~vlI~G~g-~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~ 237 (299)
..+||...+....++....--.|++++|+|.| .+|.-++.++...|++|+++.+....
T Consensus 136 ~~~PcTp~ai~~ll~~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t~~--------------------- 194 (286)
T PRK14175 136 TFVPCTPLGIMEILKHADIDLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRSKD--------------------- 194 (286)
T ss_pred CCCCCcHHHHHHHHHHcCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCchh---------------------
Confidence 35677777777777766544689999999996 59999999999999999988764322
Q ss_pred HHHhcCCccEEEEcCCCchhHHHHHHhcccCcEEEEEcCC
Q 022313 238 MKALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP 277 (299)
Q Consensus 238 ~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~ 277 (299)
+.+..+.+|+||.++|.+..+.. +.++++..++++|..
T Consensus 195 l~~~~~~ADIVIsAvg~p~~i~~--~~vk~gavVIDvGi~ 232 (286)
T PRK14175 195 MASYLKDADVIVSAVGKPGLVTK--DVVKEGAVIIDVGNT 232 (286)
T ss_pred HHHHHhhCCEEEECCCCCcccCH--HHcCCCcEEEEcCCC
Confidence 22334678999999998864544 468999999999987
No 168
>PRK06182 short chain dehydrogenase; Validated
Probab=97.32 E-value=0.0032 Score=54.73 Aligned_cols=74 Identities=23% Similarity=0.262 Sum_probs=54.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEE-EeCCCHHHHHHh-------cCCccEEEE
Q 022313 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKF-VVSSDLEQMKAL-------GKSLDFIID 250 (299)
Q Consensus 180 ~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~~~-------~~~~d~v~d 250 (299)
++++++|.|+ |++|...++.+...|++|+++++++++.+.+. ..+...+ .|..+.+.+.++ .+++|+++.
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~-~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~li~ 80 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLA-SLGVHPLSLDVTDEASIKAAVDTIIAEEGRIDVLVN 80 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-hCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 4678999998 89999999999989999999999988776663 3343322 355555444332 258999999
Q ss_pred cCCC
Q 022313 251 TASG 254 (299)
Q Consensus 251 ~~g~ 254 (299)
+.|.
T Consensus 81 ~ag~ 84 (273)
T PRK06182 81 NAGY 84 (273)
T ss_pred CCCc
Confidence 9984
No 169
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=97.30 E-value=0.004 Score=57.56 Aligned_cols=95 Identities=16% Similarity=0.195 Sum_probs=67.8
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCchHHHHHHHhcCCCEEEeCCCHHHHHHhcCCccEEEEcCCCchh
Q 022313 179 QPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHP 257 (299)
Q Consensus 179 ~~g~~vlI~G~g~~G~~a~~~a~~~g~-~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~v~d~~g~~~~ 257 (299)
-++++++|+|+|.+|.+++..+...|+ +++++.|+.++.+.+.++++...++.. +.+.+.-..+|+||.|++.+..
T Consensus 179 l~~kkvlviGaG~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~~---~~l~~~l~~aDiVI~aT~a~~~ 255 (414)
T PRK13940 179 ISSKNVLIIGAGQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHYL---SELPQLIKKADIIIAAVNVLEY 255 (414)
T ss_pred ccCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEecH---HHHHHHhccCCEEEECcCCCCe
Confidence 467899999999999999999999997 899999999888888777763223322 2333344679999999998763
Q ss_pred HHHHHHhcccCc-EEEEEcCC
Q 022313 258 FDAYMSLLKVAG-VYVLVGFP 277 (299)
Q Consensus 258 ~~~~~~~l~~~G-~~v~~g~~ 277 (299)
+-. .+.++... .+++++.+
T Consensus 256 vi~-~~~~~~~~~~~iDLavP 275 (414)
T PRK13940 256 IVT-CKYVGDKPRVFIDISIP 275 (414)
T ss_pred eEC-HHHhCCCCeEEEEeCCC
Confidence 211 12222222 46788887
No 170
>PRK05693 short chain dehydrogenase; Provisional
Probab=97.29 E-value=0.0057 Score=53.19 Aligned_cols=72 Identities=21% Similarity=0.217 Sum_probs=53.5
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEE-EeCCCHHHHHHh-------cCCccEEEEcC
Q 022313 182 KSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKF-VVSSDLEQMKAL-------GKSLDFIIDTA 252 (299)
Q Consensus 182 ~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~~~-------~~~~d~v~d~~ 252 (299)
+++||.|+ |++|...++.+...|++|++++++.++.+.+ ...+...+ .|..+.+.+.++ .+++|+++++.
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~a 80 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEAL-AAAGFTAVQLDVNDGAALARLAEELEAEHGGLDVLINNA 80 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECC
Confidence 47899998 9999999999999999999999998777766 34454333 355555444332 25799999999
Q ss_pred CC
Q 022313 253 SG 254 (299)
Q Consensus 253 g~ 254 (299)
|.
T Consensus 81 g~ 82 (274)
T PRK05693 81 GY 82 (274)
T ss_pred CC
Confidence 83
No 171
>TIGR00406 prmA ribosomal protein L11 methyltransferase. Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.
Probab=97.28 E-value=0.0047 Score=54.44 Aligned_cols=96 Identities=18% Similarity=0.222 Sum_probs=64.3
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCchHHHHHHHhc---CCC-EEEeCCCHHHHHHhcCCccEEEEcCC
Q 022313 179 QPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLL---GAD-KFVVSSDLEQMKALGKSLDFIIDTAS 253 (299)
Q Consensus 179 ~~g~~vlI~G~g~~G~~a~~~a~~~g~-~v~~~~~~~~~~~~~~~~~---g~~-~v~~~~~~~~~~~~~~~~d~v~d~~g 253 (299)
+++++||-+|+|. |..++.+++ .|+ +|++++.++...+.+++.. +.. .+..... .......++||+|+.+..
T Consensus 158 ~~g~~VLDvGcGs-G~lai~aa~-~g~~~V~avDid~~al~~a~~n~~~n~~~~~~~~~~~-~~~~~~~~~fDlVvan~~ 234 (288)
T TIGR00406 158 LKDKNVIDVGCGS-GILSIAALK-LGAAKVVGIDIDPLAVESARKNAELNQVSDRLQVKLI-YLEQPIEGKADVIVANIL 234 (288)
T ss_pred CCCCEEEEeCCCh-hHHHHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCcceEEEec-ccccccCCCceEEEEecC
Confidence 6789999999987 877777665 465 8999999988777664332 221 1111110 011112368999998665
Q ss_pred Cc---hhHHHHHHhcccCcEEEEEcCC
Q 022313 254 GD---HPFDAYMSLLKVAGVYVLVGFP 277 (299)
Q Consensus 254 ~~---~~~~~~~~~l~~~G~~v~~g~~ 277 (299)
.. ..+..+.+.|+++|.++..|..
T Consensus 235 ~~~l~~ll~~~~~~LkpgG~li~sgi~ 261 (288)
T TIGR00406 235 AEVIKELYPQFSRLVKPGGWLILSGIL 261 (288)
T ss_pred HHHHHHHHHHHHHHcCCCcEEEEEeCc
Confidence 43 2356677999999999998876
No 172
>PRK05993 short chain dehydrogenase; Provisional
Probab=97.27 E-value=0.0061 Score=53.18 Aligned_cols=73 Identities=19% Similarity=0.275 Sum_probs=54.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEE-EeCCCHHHHHHh--------cCCccEEE
Q 022313 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKF-VVSSDLEQMKAL--------GKSLDFII 249 (299)
Q Consensus 180 ~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~~~--------~~~~d~v~ 249 (299)
.+++++|.|+ |++|...++.+...|++|++++++++..+.+. +.+.+.+ .|..+.+.+..+ .+.+|+++
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~-~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~li 81 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALE-AEGLEAFQLDYAEPESIAALVAQVLELSGGRLDALF 81 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-HCCceEEEccCCCHHHHHHHHHHHHHHcCCCccEEE
Confidence 4678999998 99999999999889999999999988887773 4454333 344454433221 25789999
Q ss_pred EcCC
Q 022313 250 DTAS 253 (299)
Q Consensus 250 d~~g 253 (299)
++.|
T Consensus 82 ~~Ag 85 (277)
T PRK05993 82 NNGA 85 (277)
T ss_pred ECCC
Confidence 9886
No 173
>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]
Probab=97.27 E-value=0.0073 Score=48.97 Aligned_cols=98 Identities=24% Similarity=0.289 Sum_probs=69.5
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHC-CCeEEEEeCCchHHHHH---HHhcCCC--EEEeCCCHHHHHHhcCCccEEEEc
Q 022313 178 NQPGKSLGVIGLGGLGHMAVKFGKAF-GLNVTVLSTSTSKKEEA---LSLLGAD--KFVVSSDLEQMKALGKSLDFIIDT 251 (299)
Q Consensus 178 ~~~g~~vlI~G~g~~G~~a~~~a~~~-g~~v~~~~~~~~~~~~~---~~~~g~~--~v~~~~~~~~~~~~~~~~d~v~d~ 251 (299)
+++++.++=+|+|. |..+++++... ..+|++++++++..+.. +++||.+ +++..+.++.+..+. .+|.+|--
T Consensus 32 ~~~g~~l~DIGaGt-Gsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~g~Ap~~L~~~~-~~daiFIG 109 (187)
T COG2242 32 PRPGDRLWDIGAGT-GSITIEWALAGPSGRVIAIERDEEALELIERNAARFGVDNLEVVEGDAPEALPDLP-SPDAIFIG 109 (187)
T ss_pred CCCCCEEEEeCCCc-cHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhCCCcEEEEeccchHhhcCCC-CCCEEEEC
Confidence 38888666678853 55666777433 34999999998876543 4678866 455555566555443 79999965
Q ss_pred CCC--chhHHHHHHhcccCcEEEEEcCC
Q 022313 252 ASG--DHPFDAYMSLLKVAGVYVLVGFP 277 (299)
Q Consensus 252 ~g~--~~~~~~~~~~l~~~G~~v~~g~~ 277 (299)
-|+ ...++.++..|+++|++|.-...
T Consensus 110 Gg~~i~~ile~~~~~l~~ggrlV~nait 137 (187)
T COG2242 110 GGGNIEEILEAAWERLKPGGRLVANAIT 137 (187)
T ss_pred CCCCHHHHHHHHHHHcCcCCeEEEEeec
Confidence 553 23688999999999999987766
No 174
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.25 E-value=0.0027 Score=55.19 Aligned_cols=107 Identities=19% Similarity=0.193 Sum_probs=73.1
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHH---HhcCCCE-EE----eCCCHHHHHH----h---c
Q 022313 179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEAL---SLLGADK-FV----VSSDLEQMKA----L---G 242 (299)
Q Consensus 179 ~~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~---~~~g~~~-v~----~~~~~~~~~~----~---~ 242 (299)
-.+++|+|.|+ +++|...+.-....|++++.+++..++++... ++.+..+ ++ |-.+.+..+. + -
T Consensus 10 ~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~f 89 (282)
T KOG1205|consen 10 LAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRHF 89 (282)
T ss_pred hCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHhc
Confidence 36789999998 89999988888889999888888877766552 2333222 22 3333333332 1 2
Q ss_pred CCccEEEEcCCCc-------------------------hhHHHHHHhcccC--cEEEEEcCC-CceeeChh
Q 022313 243 KSLDFIIDTASGD-------------------------HPFDAYMSLLKVA--GVYVLVGFP-SKVKFSPA 285 (299)
Q Consensus 243 ~~~d~v~d~~g~~-------------------------~~~~~~~~~l~~~--G~~v~~g~~-~~~~~~~~ 285 (299)
+++|+.+++.|-. .+.+.++..|++. |+|+.+.+. +...+|..
T Consensus 90 g~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~P~~ 160 (282)
T KOG1205|consen 90 GRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPLPFR 160 (282)
T ss_pred CCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCCCcc
Confidence 7899999999821 2355666666665 999999888 55555554
No 175
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=97.24 E-value=0.0054 Score=56.13 Aligned_cols=95 Identities=25% Similarity=0.365 Sum_probs=71.9
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCchHHHHHHHhcCCCEEEeCCCHHHHHHhcCCccEEEEcCCCch-
Q 022313 179 QPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDH- 256 (299)
Q Consensus 179 ~~g~~vlI~G~g~~G~~a~~~a~~~g~-~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~v~d~~g~~~- 256 (299)
-+++++||+|+|-+|..++..+...|. ++++..|+.++.+++++++|+..+ . .+.+...-..+|+||-+++.+.
T Consensus 176 L~~~~vlvIGAGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~~~-~---l~el~~~l~~~DvVissTsa~~~ 251 (414)
T COG0373 176 LKDKKVLVIGAGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAEAV-A---LEELLEALAEADVVISSTSAPHP 251 (414)
T ss_pred cccCeEEEEcccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCeee-c---HHHHHHhhhhCCEEEEecCCCcc
Confidence 478999999999999999999999996 999999999999999899995433 2 2233333478999999999765
Q ss_pred --hHHHHHHhcccCc--EEEEEcCC
Q 022313 257 --PFDAYMSLLKVAG--VYVLVGFP 277 (299)
Q Consensus 257 --~~~~~~~~l~~~G--~~v~~g~~ 277 (299)
......+.++..- -+++++.+
T Consensus 252 ii~~~~ve~a~~~r~~~livDiavP 276 (414)
T COG0373 252 IITREMVERALKIRKRLLIVDIAVP 276 (414)
T ss_pred ccCHHHHHHHHhcccCeEEEEecCC
Confidence 2334445554443 46788888
No 176
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=97.23 E-value=0.0036 Score=55.18 Aligned_cols=98 Identities=19% Similarity=0.201 Sum_probs=61.6
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCc---hHHHHHHHhcCC---C---EEEeCCCHHHHHHhcCCccEE
Q 022313 179 QPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTST---SKKEEALSLLGA---D---KFVVSSDLEQMKALGKSLDFI 248 (299)
Q Consensus 179 ~~g~~vlI~G~g~~G~~a~~~a~~~g~-~v~~~~~~~---~~~~~~~~~~g~---~---~v~~~~~~~~~~~~~~~~d~v 248 (299)
.++++++|+|+|++|.+++..+...|+ +|+++.|+. ++.+.+.+++.. . ...+..+.+.+.+.-..+|++
T Consensus 124 ~~~k~vlI~GAGGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~Dil 203 (289)
T PRK12548 124 VKGKKLTVIGAGGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIASSDIL 203 (289)
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhccCCEE
Confidence 467899999999999999998888999 499999986 555555444421 1 112333333333333567999
Q ss_pred EEcCCCch-----hHHH-HHHhcccCcEEEEEcC
Q 022313 249 IDTASGDH-----PFDA-YMSLLKVAGVYVLVGF 276 (299)
Q Consensus 249 ~d~~g~~~-----~~~~-~~~~l~~~G~~v~~g~ 276 (299)
++++.-.. .... ....+.++..++++-.
T Consensus 204 INaTp~Gm~~~~~~~~~~~~~~l~~~~~v~D~vY 237 (289)
T PRK12548 204 VNATLVGMKPNDGETNIKDTSVFRKDLVVADTVY 237 (289)
T ss_pred EEeCCCCCCCCCCCCCCCcHHhcCCCCEEEEecC
Confidence 99885211 0000 1245666666666633
No 177
>PRK08618 ornithine cyclodeaminase; Validated
Probab=97.21 E-value=0.0019 Score=58.01 Aligned_cols=105 Identities=17% Similarity=0.126 Sum_probs=72.9
Q ss_pred hhccCCCCCCEEEEEcCChHHHHHHHHHH-HCCC-eEEEEeCCchHHHHHHHhc----CCCEEEeCCCHHHHHHhcCCcc
Q 022313 173 MRHKMNQPGKSLGVIGLGGLGHMAVKFGK-AFGL-NVTVLSTSTSKKEEALSLL----GADKFVVSSDLEQMKALGKSLD 246 (299)
Q Consensus 173 ~~~~~~~~g~~vlI~G~g~~G~~a~~~a~-~~g~-~v~~~~~~~~~~~~~~~~~----g~~~v~~~~~~~~~~~~~~~~d 246 (299)
+...+ +..++++|+|+|..|...+..+. ..+. +|.+..+++++.+.+.+++ +.+ +....+ ..+.....|
T Consensus 120 ~~la~-~~~~~v~iiGaG~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~-~~~~~~---~~~~~~~aD 194 (325)
T PRK08618 120 KYLAR-EDAKTLCLIGTGGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTE-IYVVNS---ADEAIEEAD 194 (325)
T ss_pred HHhcC-CCCcEEEEECCcHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCc-EEEeCC---HHHHHhcCC
Confidence 33444 56788999999999987775543 4566 8999999988887776544 432 222332 223336799
Q ss_pred EEEEcCCCchhHHHHHHhcccCcEEEEEcCC--CceeeCh
Q 022313 247 FIIDTASGDHPFDAYMSLLKVAGVYVLVGFP--SKVKFSP 284 (299)
Q Consensus 247 ~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~--~~~~~~~ 284 (299)
+|+.+++....+- . ..++++-.++.+|.. ....++.
T Consensus 195 iVi~aT~s~~p~i-~-~~l~~G~hV~~iGs~~p~~~E~~~ 232 (325)
T PRK08618 195 IIVTVTNAKTPVF-S-EKLKKGVHINAVGSFMPDMQELPS 232 (325)
T ss_pred EEEEccCCCCcch-H-HhcCCCcEEEecCCCCcccccCCH
Confidence 9999999876333 3 899999999999987 4444554
No 178
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=97.21 E-value=0.0018 Score=56.85 Aligned_cols=94 Identities=15% Similarity=0.159 Sum_probs=62.5
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCchHHHHHHHhcC----CCEEEeCCCHHHHHHhcCCccEEEEcCC
Q 022313 179 QPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLG----ADKFVVSSDLEQMKALGKSLDFIIDTAS 253 (299)
Q Consensus 179 ~~g~~vlI~G~g~~G~~a~~~a~~~g~-~v~~~~~~~~~~~~~~~~~g----~~~v~~~~~~~~~~~~~~~~d~v~d~~g 253 (299)
.++++|+|+|+|+.|.+++..+...|+ +++++.|+.++.+.+.++++ ...+....+ +.+....+|+|++++.
T Consensus 125 ~~~k~vlIlGaGGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~~~~---~~~~~~~aDiVInaTp 201 (284)
T PRK12549 125 ASLERVVQLGAGGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPAARATAGSD---LAAALAAADGLVHATP 201 (284)
T ss_pred ccCCEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEeccc---hHhhhCCCCEEEECCc
Confidence 456899999999999999999999998 89999999998888766653 122222221 2222367999999954
Q ss_pred Cc--hh--HHHHHHhcccCcEEEEEc
Q 022313 254 GD--HP--FDAYMSLLKVAGVYVLVG 275 (299)
Q Consensus 254 ~~--~~--~~~~~~~l~~~G~~v~~g 275 (299)
.. .. ..-....++++..++++-
T Consensus 202 ~Gm~~~~~~~~~~~~l~~~~~v~Div 227 (284)
T PRK12549 202 TGMAKHPGLPLPAELLRPGLWVADIV 227 (284)
T ss_pred CCCCCCCCCCCCHHHcCCCcEEEEee
Confidence 21 10 011124566666666553
No 179
>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1.4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....
Probab=97.19 E-value=0.001 Score=53.75 Aligned_cols=96 Identities=21% Similarity=0.262 Sum_probs=65.5
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEEeC-------------------CC-HHHHH
Q 022313 180 PGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVS-------------------SD-LEQMK 239 (299)
Q Consensus 180 ~g~~vlI~G~g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~-------------------~~-~~~~~ 239 (299)
+..+|+|+|+|.+|+.|+.+++.+|+++++.+...++.++. +..+...+... .. ...+.
T Consensus 19 ~p~~vvv~G~G~vg~gA~~~~~~lGa~v~~~d~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~ 97 (168)
T PF01262_consen 19 PPAKVVVTGAGRVGQGAAEIAKGLGAEVVVPDERPERLRQL-ESLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNFA 97 (168)
T ss_dssp -T-EEEEESTSHHHHHHHHHHHHTT-EEEEEESSHHHHHHH-HHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHHH
T ss_pred CCeEEEEECCCHHHHHHHHHHhHCCCEEEeccCCHHHHHhh-hcccCceEEEcccccccccccchhhhhHHHHHhHHHHH
Confidence 44789999999999999999999999999999998888877 56665433321 10 11222
Q ss_pred HhcCCccEEEEcC--CC----chhHHHHHHhcccCcEEEEEcC
Q 022313 240 ALGKSLDFIIDTA--SG----DHPFDAYMSLLKVAGVYVLVGF 276 (299)
Q Consensus 240 ~~~~~~d~v~d~~--g~----~~~~~~~~~~l~~~G~~v~~g~ 276 (299)
+....+|+++.+. .+ ....+..++.|+++..++++.-
T Consensus 98 ~~i~~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~gsvIvDis~ 140 (168)
T PF01262_consen 98 EFIAPADIVIGNGLYWGKRAPRLVTEEMVKSMKPGSVIVDISC 140 (168)
T ss_dssp HHHHH-SEEEEHHHBTTSS---SBEHHHHHTSSTTEEEEETTG
T ss_pred HHHhhCcEEeeecccCCCCCCEEEEhHHhhccCCCceEEEEEe
Confidence 2336789988522 12 2246778899999999998843
No 180
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=97.18 E-value=0.0026 Score=55.60 Aligned_cols=103 Identities=20% Similarity=0.260 Sum_probs=67.0
Q ss_pred HHHHhhhcc--CCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCchHHHHHHHhcCCCE----EEeCCCHHHHHH
Q 022313 168 VYTPMMRHK--MNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADK----FVVSSDLEQMKA 240 (299)
Q Consensus 168 a~~al~~~~--~~~~g~~vlI~G~g~~G~~a~~~a~~~g~-~v~~~~~~~~~~~~~~~~~g~~~----v~~~~~~~~~~~ 240 (299)
.+.+|.... ...++++++|+|+|+.+.+++..+...|+ +++++.|+.++.+++++.++... .....+.+ .
T Consensus 111 ~~~~L~~~~~~~~~~~~~vlilGAGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~~~~~~~~~~~~---~ 187 (283)
T COG0169 111 FLRALKEFGLPVDVTGKRVLILGAGGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGAAVEAAALADLE---G 187 (283)
T ss_pred HHHHHHhcCCCcccCCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhcccccccccccccc---c
Confidence 344555432 23468999999999999999999999996 89999999999998877776321 11111111 1
Q ss_pred hcCCccEEEEcCCCchhHH-----HHHHhcccCcEEEEE
Q 022313 241 LGKSLDFIIDTASGDHPFD-----AYMSLLKVAGVYVLV 274 (299)
Q Consensus 241 ~~~~~d~v~d~~g~~~~~~-----~~~~~l~~~G~~v~~ 274 (299)
. ..+|++++++.-...-. .....+++.-.+.++
T Consensus 188 ~-~~~dliINaTp~Gm~~~~~~~~~~~~~l~~~~~v~D~ 225 (283)
T COG0169 188 L-EEADLLINATPVGMAGPEGDSPVPAELLPKGAIVYDV 225 (283)
T ss_pred c-cccCEEEECCCCCCCCCCCCCCCcHHhcCcCCEEEEe
Confidence 1 15899999877321000 014556666666555
No 181
>PRK05872 short chain dehydrogenase; Provisional
Probab=97.17 E-value=0.0038 Score=55.10 Aligned_cols=75 Identities=21% Similarity=0.269 Sum_probs=57.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCC--CEE---EeCCCHHHHHHh-------cCCcc
Q 022313 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGA--DKF---VVSSDLEQMKAL-------GKSLD 246 (299)
Q Consensus 180 ~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~--~~v---~~~~~~~~~~~~-------~~~~d 246 (299)
+++++||.|+ |++|...++.+...|++|++++++.++.+.+.++++. ... .|..+.+.+.++ .+++|
T Consensus 8 ~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id 87 (296)
T PRK05872 8 AGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFGGID 87 (296)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 5789999998 8999999999999999999999998888877666652 111 344454443332 26799
Q ss_pred EEEEcCCC
Q 022313 247 FIIDTASG 254 (299)
Q Consensus 247 ~v~d~~g~ 254 (299)
+++++.|.
T Consensus 88 ~vI~nAG~ 95 (296)
T PRK05872 88 VVVANAGI 95 (296)
T ss_pred EEEECCCc
Confidence 99999984
No 182
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=97.17 E-value=0.0028 Score=55.56 Aligned_cols=96 Identities=21% Similarity=0.280 Sum_probs=65.8
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCC-CeEEEEeCCchHHHHHHHhcCCCEEEeCCCHHHHHHhcCCccEEEEcCCCchh
Q 022313 179 QPGKSLGVIGLGGLGHMAVKFGKAFG-LNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHP 257 (299)
Q Consensus 179 ~~g~~vlI~G~g~~G~~a~~~a~~~g-~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~v~d~~g~~~~ 257 (299)
..+++++|+|+|++|.+++..+...| .+|+++.|+.++.+.+.++++....+... . ...+....+|+|++++.....
T Consensus 121 ~~~k~vlVlGaGg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~~-~-~~~~~~~~~DivInaTp~g~~ 198 (278)
T PRK00258 121 LKGKRILILGAGGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAELD-L-ELQEELADFDLIINATSAGMS 198 (278)
T ss_pred CCCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceeec-c-cchhccccCCEEEECCcCCCC
Confidence 56788999999999999999999999 59999999999888876666532101110 0 111233679999999875320
Q ss_pred -----HHHHHHhcccCcEEEEEcC
Q 022313 258 -----FDAYMSLLKVAGVYVLVGF 276 (299)
Q Consensus 258 -----~~~~~~~l~~~G~~v~~g~ 276 (299)
.......++++..++++-.
T Consensus 199 ~~~~~~~~~~~~l~~~~~v~DivY 222 (278)
T PRK00258 199 GELPLPPLPLSLLRPGTIVYDMIY 222 (278)
T ss_pred CCCCCCCCCHHHcCCCCEEEEeec
Confidence 0122356777777777743
No 183
>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial. This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli.
Probab=97.17 E-value=0.00074 Score=63.69 Aligned_cols=77 Identities=18% Similarity=0.233 Sum_probs=55.5
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCch---------------------HHHHHHHhcCCCEEEeCCCHH-
Q 022313 179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTS---------------------KKEEALSLLGADKFVVSSDLE- 236 (299)
Q Consensus 179 ~~g~~vlI~G~g~~G~~a~~~a~~~g~~v~~~~~~~~---------------------~~~~~~~~~g~~~v~~~~~~~- 236 (299)
..+++|+|+|+|+.|+.++..++..|.+|+++...+. ..+.+ +++|.+..++.....
T Consensus 139 ~~~~~V~IIG~GpaGl~aA~~l~~~G~~V~i~e~~~~~gG~l~~gip~~~~~~~~~~~~~~~~-~~~Gv~~~~~~~v~~~ 217 (467)
T TIGR01318 139 PTGKRVAVIGAGPAGLACADILARAGVQVVVFDRHPEIGGLLTFGIPSFKLDKAVLSRRREIF-TAMGIEFHLNCEVGRD 217 (467)
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCceeeecCccccCCHHHHHHHHHHH-HHCCCEEECCCEeCCc
Confidence 3678999999999999999999999999999886642 23444 678876555432111
Q ss_pred -HHHHhcCCccEEEEcCCCch
Q 022313 237 -QMKALGKSLDFIIDTASGDH 256 (299)
Q Consensus 237 -~~~~~~~~~d~v~d~~g~~~ 256 (299)
.+.....++|.||.++|...
T Consensus 218 ~~~~~~~~~~D~vilAtGa~~ 238 (467)
T TIGR01318 218 ISLDDLLEDYDAVFLGVGTYR 238 (467)
T ss_pred cCHHHHHhcCCEEEEEeCCCC
Confidence 12223357999999999753
No 184
>PRK07109 short chain dehydrogenase; Provisional
Probab=97.16 E-value=0.008 Score=54.14 Aligned_cols=98 Identities=17% Similarity=0.187 Sum_probs=67.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHh---cCCCEE---EeCCCHHHHHHh-------cCCc
Q 022313 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL---LGADKF---VVSSDLEQMKAL-------GKSL 245 (299)
Q Consensus 180 ~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~---~g~~~v---~~~~~~~~~~~~-------~~~~ 245 (299)
++++++|.|+ |++|...++.+...|++|+++++++++.+.+.++ .|.+.. .|..+.+.+.++ .+++
T Consensus 7 ~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g~i 86 (334)
T PRK07109 7 GRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELGPI 86 (334)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCCCC
Confidence 4678999998 9999999999999999999999998776655433 343221 244455444332 2579
Q ss_pred cEEEEcCCCch-------------------------hHHHHHHhccc--CcEEEEEcCC
Q 022313 246 DFIIDTASGDH-------------------------PFDAYMSLLKV--AGVYVLVGFP 277 (299)
Q Consensus 246 d~v~d~~g~~~-------------------------~~~~~~~~l~~--~G~~v~~g~~ 277 (299)
|+++++.|... ..+.+++.+++ .|+++.++..
T Consensus 87 D~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~ 145 (334)
T PRK07109 87 DTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSA 145 (334)
T ss_pred CEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCCh
Confidence 99999988421 12234555544 5899998876
No 185
>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional
Probab=97.15 E-value=0.0071 Score=55.49 Aligned_cols=112 Identities=21% Similarity=0.242 Sum_probs=75.2
Q ss_pred ccchhhHHHHHHhhhccCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEE-EeCCCHHHH
Q 022313 160 PLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKF-VVSSDLEQM 238 (299)
Q Consensus 160 ~~~~~~~ta~~al~~~~~~~~g~~vlI~G~g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v-~~~~~~~~~ 238 (299)
.+..+..+.+..+.....++++.+||-+|+| .|..+..+++..|++|+.++.+++..+.+.+......+ +...+ .
T Consensus 147 ~L~~Aq~~k~~~l~~~l~l~~g~rVLDIGcG-~G~~a~~la~~~g~~V~giDlS~~~l~~A~~~~~~l~v~~~~~D---~ 222 (383)
T PRK11705 147 TLEEAQEAKLDLICRKLQLKPGMRVLDIGCG-WGGLARYAAEHYGVSVVGVTISAEQQKLAQERCAGLPVEIRLQD---Y 222 (383)
T ss_pred CHHHHHHHHHHHHHHHhCCCCCCEEEEeCCC-ccHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccCeEEEEECc---h
Confidence 4444455555555444455899999999986 47778888888899999999999988888554421111 11111 2
Q ss_pred HHhcCCccEEEEc-----CCC---chhHHHHHHhcccCcEEEEEc
Q 022313 239 KALGKSLDFIIDT-----ASG---DHPFDAYMSLLKVAGVYVLVG 275 (299)
Q Consensus 239 ~~~~~~~d~v~d~-----~g~---~~~~~~~~~~l~~~G~~v~~g 275 (299)
.++.+.||.|+.. ++. ...++.+.+.|+|+|+++...
T Consensus 223 ~~l~~~fD~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpGG~lvl~~ 267 (383)
T PRK11705 223 RDLNGQFDRIVSVGMFEHVGPKNYRTYFEVVRRCLKPDGLFLLHT 267 (383)
T ss_pred hhcCCCCCEEEEeCchhhCChHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 2234679998643 333 234788889999999998753
No 186
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=97.14 E-value=0.0029 Score=58.19 Aligned_cols=92 Identities=22% Similarity=0.175 Sum_probs=66.0
Q ss_pred EEEEcCChHHHHHHHHHHHCCC--eEEEEeCCchHHHHHHHhcC----CCEEEeCCCHHHHHHhcCCccEEEEcCCCchh
Q 022313 184 LGVIGLGGLGHMAVKFGKAFGL--NVTVLSTSTSKKEEALSLLG----ADKFVVSSDLEQMKALGKSLDFIIDTASGDHP 257 (299)
Q Consensus 184 vlI~G~g~~G~~a~~~a~~~g~--~v~~~~~~~~~~~~~~~~~g----~~~v~~~~~~~~~~~~~~~~d~v~d~~g~~~~ 257 (299)
|+|+|+|.+|..+++.+....- +|++.+++.++.+.+.+++. ....++..+.+.+.++-++.|+|++|+|....
T Consensus 1 IlvlG~G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~dvVin~~gp~~~ 80 (386)
T PF03435_consen 1 ILVLGAGRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDPESLAELLRGCDVVINCAGPFFG 80 (386)
T ss_dssp EEEE--SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTHHHHHHHHTTSSEEEE-SSGGGH
T ss_pred CEEEcCcHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCHHHHHHHHhcCCEEEECCccchh
Confidence 6889999999999999997764 89999999999888765432 12334666666777777888999999998754
Q ss_pred HHHHHHhcccCcEEEEEc
Q 022313 258 FDAYMSLLKVAGVYVLVG 275 (299)
Q Consensus 258 ~~~~~~~l~~~G~~v~~g 275 (299)
...+..|++.+-.+++..
T Consensus 81 ~~v~~~~i~~g~~yvD~~ 98 (386)
T PF03435_consen 81 EPVARACIEAGVHYVDTS 98 (386)
T ss_dssp HHHHHHHHHHT-EEEESS
T ss_pred HHHHHHHHHhCCCeeccc
Confidence 556667788888888843
No 187
>PRK08339 short chain dehydrogenase; Provisional
Probab=97.14 E-value=0.0092 Score=51.69 Aligned_cols=98 Identities=15% Similarity=0.146 Sum_probs=67.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhc----CCC-EE--EeCCCHHHHHHh------cCCc
Q 022313 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL----GAD-KF--VVSSDLEQMKAL------GKSL 245 (299)
Q Consensus 180 ~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~----g~~-~v--~~~~~~~~~~~~------~~~~ 245 (299)
+++++||.|+ +++|.+.++.+...|++|+++++++++.+.+.+++ +.. .. .|..+.+.+.++ .+++
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~g~i 86 (263)
T PRK08339 7 SGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKNIGEP 86 (263)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhhCCC
Confidence 5788999998 89999999999999999999999988776654443 321 12 244444433322 1578
Q ss_pred cEEEEcCCCch-------------------------hHHHHHHhccc--CcEEEEEcCC
Q 022313 246 DFIIDTASGDH-------------------------PFDAYMSLLKV--AGVYVLVGFP 277 (299)
Q Consensus 246 d~v~d~~g~~~-------------------------~~~~~~~~l~~--~G~~v~~g~~ 277 (299)
|+++.+.|... ..+.+++.++. .|+++.++..
T Consensus 87 D~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~ 145 (263)
T PRK08339 87 DIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSV 145 (263)
T ss_pred cEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCc
Confidence 99999987420 13445555543 4899988776
No 188
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=97.14 E-value=0.005 Score=54.04 Aligned_cols=74 Identities=16% Similarity=0.259 Sum_probs=52.8
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCchHHHHHHHhcC----CCEEEeCCCHHHHHHhcCCccEEEEcCC
Q 022313 179 QPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLG----ADKFVVSSDLEQMKALGKSLDFIIDTAS 253 (299)
Q Consensus 179 ~~g~~vlI~G~g~~G~~a~~~a~~~g~-~v~~~~~~~~~~~~~~~~~g----~~~v~~~~~~~~~~~~~~~~d~v~d~~g 253 (299)
.++++++|+|+|+.+.+++..+...|+ +++++.|+.++.+.+.+++. ...+. ..+.....+....+|+|++++.
T Consensus 125 ~~~k~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~~~~~~~~~-~~~~~~~~~~~~~~divINaTp 203 (283)
T PRK14027 125 AKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVV-GVDARGIEDVIAAADGVVNATP 203 (283)
T ss_pred cCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhccCcceEE-ecCHhHHHHHHhhcCEEEEcCC
Confidence 457899999999999999999988998 89999999988888766553 11121 1121112222356899999876
No 189
>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit. This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.
Probab=97.12 E-value=0.014 Score=43.85 Aligned_cols=97 Identities=20% Similarity=0.209 Sum_probs=65.4
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHCC-CeEEEEeCCchHHHHHHH---hcCCC--EEEeCCCHHHHHHhcCCccEEEEc
Q 022313 178 NQPGKSLGVIGLGGLGHMAVKFGKAFG-LNVTVLSTSTSKKEEALS---LLGAD--KFVVSSDLEQMKALGKSLDFIIDT 251 (299)
Q Consensus 178 ~~~g~~vlI~G~g~~G~~a~~~a~~~g-~~v~~~~~~~~~~~~~~~---~~g~~--~v~~~~~~~~~~~~~~~~d~v~d~ 251 (299)
+.++++|+-+|+|. |..+..+++..+ .+++.++.++...+.+.+ .++.. .++..+.........+.+|+|+..
T Consensus 17 ~~~~~~vldlG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~ 95 (124)
T TIGR02469 17 LRPGDVLWDIGAGS-GSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGVSNIVIVEGDAPEALEDSLPEPDRVFIG 95 (124)
T ss_pred CCCCCEEEEeCCCC-CHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCceEEEeccccccChhhcCCCCEEEEC
Confidence 36778888899976 888888888765 599999999887766532 33432 222222111122233689999975
Q ss_pred CCCc---hhHHHHHHhcccCcEEEEEc
Q 022313 252 ASGD---HPFDAYMSLLKVAGVYVLVG 275 (299)
Q Consensus 252 ~g~~---~~~~~~~~~l~~~G~~v~~g 275 (299)
.... ..++.+.+.|+++|+++...
T Consensus 96 ~~~~~~~~~l~~~~~~Lk~gG~li~~~ 122 (124)
T TIGR02469 96 GSGGLLQEILEAIWRRLRPGGRIVLNA 122 (124)
T ss_pred CcchhHHHHHHHHHHHcCCCCEEEEEe
Confidence 5432 25788999999999998754
No 190
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.09 E-value=0.011 Score=55.37 Aligned_cols=75 Identities=17% Similarity=0.216 Sum_probs=53.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCc--hHHHHHHHhcCCCEE-EeCCCHHHHHHh-------cCCccEE
Q 022313 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTST--SKKEEALSLLGADKF-VVSSDLEQMKAL-------GKSLDFI 248 (299)
Q Consensus 180 ~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~--~~~~~~~~~~g~~~v-~~~~~~~~~~~~-------~~~~d~v 248 (299)
+++++||.|+ |++|...++.+...|++|+++++.. +..+.+.++++...+ .|..+.+.+.++ .+++|++
T Consensus 209 ~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~v 288 (450)
T PRK08261 209 AGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRVGGTALALDITAPDAPARIAEHLAERHGGLDIV 288 (450)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhCCCCCEE
Confidence 5789999998 9999999999999999999988743 344455455664332 355554443332 2478999
Q ss_pred EEcCCC
Q 022313 249 IDTASG 254 (299)
Q Consensus 249 ~d~~g~ 254 (299)
|.+.|.
T Consensus 289 i~~AG~ 294 (450)
T PRK08261 289 VHNAGI 294 (450)
T ss_pred EECCCc
Confidence 999983
No 191
>PRK12939 short chain dehydrogenase; Provisional
Probab=97.09 E-value=0.0077 Score=51.33 Aligned_cols=75 Identities=21% Similarity=0.192 Sum_probs=53.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhc---CCC-EE--EeCCCHHHHHHh-------cCCc
Q 022313 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL---GAD-KF--VVSSDLEQMKAL-------GKSL 245 (299)
Q Consensus 180 ~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~---g~~-~v--~~~~~~~~~~~~-------~~~~ 245 (299)
++++++|.|+ |++|...+..+...|++|+++++++++.+.+.+++ +.. .+ .|..+.+.+.++ .+++
T Consensus 6 ~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 85 (250)
T PRK12939 6 AGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGGL 85 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 5788999998 99999999999999999999998877666553332 322 12 244454444332 2579
Q ss_pred cEEEEcCCC
Q 022313 246 DFIIDTASG 254 (299)
Q Consensus 246 d~v~d~~g~ 254 (299)
|+++.++|.
T Consensus 86 d~vi~~ag~ 94 (250)
T PRK12939 86 DGLVNNAGI 94 (250)
T ss_pred CEEEECCCC
Confidence 999999985
No 192
>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2.1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....
Probab=97.08 E-value=0.0017 Score=54.37 Aligned_cols=95 Identities=28% Similarity=0.282 Sum_probs=62.6
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHCCC--eEEEEeCCchHHHHHHH---hcCCCE--EEeCCCHHHHHHhcCCccEEEE
Q 022313 178 NQPGKSLGVIGLGGLGHMAVKFGKAFGL--NVTVLSTSTSKKEEALS---LLGADK--FVVSSDLEQMKALGKSLDFIID 250 (299)
Q Consensus 178 ~~~g~~vlI~G~g~~G~~a~~~a~~~g~--~v~~~~~~~~~~~~~~~---~~g~~~--v~~~~~~~~~~~~~~~~d~v~d 250 (299)
+++|++||-+|+|. |+.++-+++..|. +|+.+.+.++-.+.+.+ +++.+. ++..+....+. ...+||.|+-
T Consensus 70 l~pg~~VLeIGtGs-GY~aAlla~lvg~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~gdg~~g~~-~~apfD~I~v 147 (209)
T PF01135_consen 70 LKPGDRVLEIGTGS-GYQAALLAHLVGPVGRVVSVERDPELAERARRNLARLGIDNVEVVVGDGSEGWP-EEAPFDRIIV 147 (209)
T ss_dssp C-TT-EEEEES-TT-SHHHHHHHHHHSTTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEES-GGGTTG-GG-SEEEEEE
T ss_pred cCCCCEEEEecCCC-cHHHHHHHHhcCccceEEEECccHHHHHHHHHHHHHhccCceeEEEcchhhccc-cCCCcCEEEE
Confidence 59999999999874 8888888887775 68888888775555433 345432 22222111111 1368999999
Q ss_pred cCCCchhHHHHHHhcccCcEEEEE
Q 022313 251 TASGDHPFDAYMSLLKVAGVYVLV 274 (299)
Q Consensus 251 ~~g~~~~~~~~~~~l~~~G~~v~~ 274 (299)
+.+-...-...+++|+++|+++..
T Consensus 148 ~~a~~~ip~~l~~qL~~gGrLV~p 171 (209)
T PF01135_consen 148 TAAVPEIPEALLEQLKPGGRLVAP 171 (209)
T ss_dssp SSBBSS--HHHHHTEEEEEEEEEE
T ss_pred eeccchHHHHHHHhcCCCcEEEEE
Confidence 888777678899999999999874
No 193
>PRK07060 short chain dehydrogenase; Provisional
Probab=97.07 E-value=0.0052 Score=52.26 Aligned_cols=76 Identities=18% Similarity=0.223 Sum_probs=57.1
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEE-EeCCCHHHHHHh---cCCccEEEEcCC
Q 022313 179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKF-VVSSDLEQMKAL---GKSLDFIIDTAS 253 (299)
Q Consensus 179 ~~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~~~---~~~~d~v~d~~g 253 (299)
.++++++|.|+ |.+|...++.+...|++|+++++++++.+++.++.+...+ .+..+.+.+.+. .+++|++|.+.|
T Consensus 7 ~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~d~vi~~ag 86 (245)
T PRK07060 7 FSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETGCEPLRLDVGDDAAIRAALAAAGAFDGLVNCAG 86 (245)
T ss_pred cCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeEEEecCCCHHHHHHHHHHhCCCCEEEECCC
Confidence 35688999998 8999999999999999999999998877777555554332 344454444333 257899999987
Q ss_pred C
Q 022313 254 G 254 (299)
Q Consensus 254 ~ 254 (299)
.
T Consensus 87 ~ 87 (245)
T PRK07060 87 I 87 (245)
T ss_pred C
Confidence 4
No 194
>PRK06139 short chain dehydrogenase; Provisional
Probab=97.07 E-value=0.0046 Score=55.60 Aligned_cols=75 Identities=20% Similarity=0.297 Sum_probs=55.9
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHh---cCCCE---EEeCCCHHHHHHh-------cCC
Q 022313 179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL---LGADK---FVVSSDLEQMKAL-------GKS 244 (299)
Q Consensus 179 ~~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~---~g~~~---v~~~~~~~~~~~~-------~~~ 244 (299)
-++++++|.|+ |++|...++.+...|++|+++++++++++++.++ .|.+. ..|..+.+.+.++ .++
T Consensus 5 l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 84 (330)
T PRK06139 5 LHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGGR 84 (330)
T ss_pred CCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence 35689999998 8999999999999999999999998887665433 35332 2244455444432 267
Q ss_pred ccEEEEcCC
Q 022313 245 LDFIIDTAS 253 (299)
Q Consensus 245 ~d~v~d~~g 253 (299)
+|++++++|
T Consensus 85 iD~lVnnAG 93 (330)
T PRK06139 85 IDVWVNNVG 93 (330)
T ss_pred CCEEEECCC
Confidence 999999998
No 195
>PRK06057 short chain dehydrogenase; Provisional
Probab=97.05 E-value=0.0066 Score=52.18 Aligned_cols=75 Identities=21% Similarity=0.190 Sum_probs=55.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEE-EeCCCHHHHHHh-------cCCccEEEE
Q 022313 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKF-VVSSDLEQMKAL-------GKSLDFIID 250 (299)
Q Consensus 180 ~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~~~-------~~~~d~v~d 250 (299)
++++++|.|+ |++|...++.+...|++|+++++++.+.+...++++...+ .|..+.+.+.++ .+++|+++.
T Consensus 6 ~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~ 85 (255)
T PRK06057 6 AGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVGGLFVPTDVTDEDAVNALFDTAAETYGSVDIAFN 85 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCcEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 5789999998 9999999999999999999999988777666555554222 245554443332 257899999
Q ss_pred cCCC
Q 022313 251 TASG 254 (299)
Q Consensus 251 ~~g~ 254 (299)
+.|.
T Consensus 86 ~ag~ 89 (255)
T PRK06057 86 NAGI 89 (255)
T ss_pred CCCc
Confidence 8874
No 196
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=97.04 E-value=0.014 Score=48.47 Aligned_cols=49 Identities=27% Similarity=0.333 Sum_probs=43.1
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCC
Q 022313 179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGAD 227 (299)
Q Consensus 179 ~~g~~vlI~G~g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~ 227 (299)
-+|++++|+|.|.+|..+++.+...|++|+++++++++.+.+.+.+++.
T Consensus 26 l~gk~v~I~G~G~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~~g~~ 74 (200)
T cd01075 26 LEGKTVAVQGLGKVGYKLAEHLLEEGAKLIVADINEEAVARAAELFGAT 74 (200)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCE
Confidence 4778999999999999999999999999999999988888876666653
No 197
>PRK09186 flagellin modification protein A; Provisional
Probab=97.04 E-value=0.013 Score=50.17 Aligned_cols=74 Identities=22% Similarity=0.185 Sum_probs=53.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhc----CCC--E--EEeCCCHHHHHHh-------cC
Q 022313 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL----GAD--K--FVVSSDLEQMKAL-------GK 243 (299)
Q Consensus 180 ~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~----g~~--~--v~~~~~~~~~~~~-------~~ 243 (299)
+++++||.|+ |.+|...+..+...|++|+++.+++++.+++.+++ +.. . ..|..+.+.+.++ .+
T Consensus 3 ~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~ 82 (256)
T PRK09186 3 KGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKYG 82 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Confidence 5789999998 89999999999999999999999887776654444 221 1 2244454444332 25
Q ss_pred CccEEEEcCC
Q 022313 244 SLDFIIDTAS 253 (299)
Q Consensus 244 ~~d~v~d~~g 253 (299)
++|+++.+.+
T Consensus 83 ~id~vi~~A~ 92 (256)
T PRK09186 83 KIDGAVNCAY 92 (256)
T ss_pred CccEEEECCc
Confidence 6899999885
No 198
>PRK07326 short chain dehydrogenase; Provisional
Probab=97.04 E-value=0.0085 Score=50.70 Aligned_cols=75 Identities=23% Similarity=0.167 Sum_probs=53.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCC---CEEE--eCCCHHHHHHh-------cCCcc
Q 022313 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGA---DKFV--VSSDLEQMKAL-------GKSLD 246 (299)
Q Consensus 180 ~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~---~~v~--~~~~~~~~~~~-------~~~~d 246 (299)
++++++|+|+ |.+|...++.+...|++|+++++++++.+.+.+++.. -+.+ +..+.+.+.+. .+++|
T Consensus 5 ~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 84 (237)
T PRK07326 5 KGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGLD 84 (237)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 4688999998 9999999998888899999999988777666555431 1222 33444433221 24799
Q ss_pred EEEEcCCC
Q 022313 247 FIIDTASG 254 (299)
Q Consensus 247 ~v~d~~g~ 254 (299)
++|.+.|.
T Consensus 85 ~vi~~ag~ 92 (237)
T PRK07326 85 VLIANAGV 92 (237)
T ss_pred EEEECCCC
Confidence 99998874
No 199
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=97.04 E-value=0.0062 Score=53.12 Aligned_cols=104 Identities=18% Similarity=0.119 Sum_probs=68.5
Q ss_pred HHHhhhccCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCC---CEEEeCCCHHHHHHhcCCc
Q 022313 169 YTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGA---DKFVVSSDLEQMKALGKSL 245 (299)
Q Consensus 169 ~~al~~~~~~~~g~~vlI~G~g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~---~~v~~~~~~~~~~~~~~~~ 245 (299)
..++.......++++++|+|+|++|.+++..+...|++|+++.|+.++.+.+.+++.. ....... . .....+
T Consensus 105 ~~~l~~~~~~~~~k~vliiGaGg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~~~~~~~~~---~--~~~~~~ 179 (270)
T TIGR00507 105 VSDLERLIPLRPNQRVLIIGAGGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYGEIQAFSMD---E--LPLHRV 179 (270)
T ss_pred HHHHHhcCCCccCCEEEEEcCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcCceEEechh---h--hcccCc
Confidence 3344433333567899999999999999998888899999999998887777655532 1222111 1 112568
Q ss_pred cEEEEcCCCch--hH---HHHHHhcccCcEEEEEcCC
Q 022313 246 DFIIDTASGDH--PF---DAYMSLLKVAGVYVLVGFP 277 (299)
Q Consensus 246 d~v~d~~g~~~--~~---~~~~~~l~~~G~~v~~g~~ 277 (299)
|+|+++++... .. ......++++..++++-..
T Consensus 180 DivInatp~gm~~~~~~~~~~~~~l~~~~~v~D~~y~ 216 (270)
T TIGR00507 180 DLIINATSAGMSGNIDEPPVPAEKLKEGMVVYDMVYN 216 (270)
T ss_pred cEEEECCCCCCCCCCCCCCCCHHHcCCCCEEEEeccC
Confidence 99999998631 01 1123557777788877444
No 200
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.03 E-value=0.0084 Score=52.53 Aligned_cols=93 Identities=19% Similarity=0.201 Sum_probs=65.4
Q ss_pred chhhHHHHHHhhhccCCCCCCEEEEEcCCh-HHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEEeCCCHHHHHH
Q 022313 162 LCAGITVYTPMMRHKMNQPGKSLGVIGLGG-LGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKA 240 (299)
Q Consensus 162 ~~~~~ta~~al~~~~~~~~g~~vlI~G~g~-~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~ 240 (299)
+|.-.+....++.....-.|++++|+|.|. +|...+.++...|++|++..+....+. +
T Consensus 140 p~T~~gii~~L~~~~i~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t~~L~---------------------~ 198 (283)
T PRK14192 140 SATPAGIMRLLKAYNIELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSRTQNLP---------------------E 198 (283)
T ss_pred CCcHHHHHHHHHHcCCCCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCchhHH---------------------H
Confidence 333334444555544447889999999976 999999999999998888876322221 1
Q ss_pred hcCCccEEEEcCCCchhHHHHHHhcccCcEEEEEcCC
Q 022313 241 LGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP 277 (299)
Q Consensus 241 ~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~ 277 (299)
..+.+|+++.++|.+..+. .+.++++-.++++|..
T Consensus 199 ~~~~aDIvI~AtG~~~~v~--~~~lk~gavViDvg~n 233 (283)
T PRK14192 199 LVKQADIIVGAVGKPELIK--KDWIKQGAVVVDAGFH 233 (283)
T ss_pred HhccCCEEEEccCCCCcCC--HHHcCCCCEEEEEEEe
Confidence 2256899999998765332 3568999999998866
No 201
>PRK12749 quinate/shikimate dehydrogenase; Reviewed
Probab=97.03 E-value=0.0089 Score=52.60 Aligned_cols=85 Identities=14% Similarity=0.207 Sum_probs=53.6
Q ss_pred HHHhhhccCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCch---HHHHHHHhcCCC-----EEEeCCCHHHHH
Q 022313 169 YTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTS---KKEEALSLLGAD-----KFVVSSDLEQMK 239 (299)
Q Consensus 169 ~~al~~~~~~~~g~~vlI~G~g~~G~~a~~~a~~~g~-~v~~~~~~~~---~~~~~~~~~g~~-----~v~~~~~~~~~~ 239 (299)
..+++....-.++++++|+|+|+.+.+++..+...|+ +++++.|+++ +.+.+.++++.. .+....+.+.+.
T Consensus 112 ~~~l~~~~~~~~~k~vlvlGaGGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~~~~~~~~~~~~l~ 191 (288)
T PRK12749 112 IRAIKESGFDIKGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFA 191 (288)
T ss_pred HHHHHhcCCCcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhccCceEEEechhhhhhhh
Confidence 3344433222467899999999889887777777887 8999999853 666665666421 122211111122
Q ss_pred HhcCCccEEEEcCC
Q 022313 240 ALGKSLDFIIDTAS 253 (299)
Q Consensus 240 ~~~~~~d~v~d~~g 253 (299)
+....+|+|++++.
T Consensus 192 ~~~~~aDivINaTp 205 (288)
T PRK12749 192 EALASADILTNGTK 205 (288)
T ss_pred hhcccCCEEEECCC
Confidence 23357899999875
No 202
>PRK06484 short chain dehydrogenase; Validated
Probab=97.02 E-value=0.014 Score=55.81 Aligned_cols=99 Identities=17% Similarity=0.198 Sum_probs=71.6
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCE---EEeCCCHHHHHHh-------cCCccE
Q 022313 179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADK---FVVSSDLEQMKAL-------GKSLDF 247 (299)
Q Consensus 179 ~~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~---v~~~~~~~~~~~~-------~~~~d~ 247 (299)
..++++||.|+ +++|...++.+...|++|+++++++++.+.+.++++... ..|..+.+.+.++ .+.+|+
T Consensus 267 ~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~ 346 (520)
T PRK06484 267 ESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWGRLDV 346 (520)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 46789999988 899999999999999999999999888887766666432 2244444443332 267999
Q ss_pred EEEcCCCc--------------------------hhHHHHHHhcccCcEEEEEcCC
Q 022313 248 IIDTASGD--------------------------HPFDAYMSLLKVAGVYVLVGFP 277 (299)
Q Consensus 248 v~d~~g~~--------------------------~~~~~~~~~l~~~G~~v~~g~~ 277 (299)
++.++|.. ...+.++..++.+|+++.++..
T Consensus 347 li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~ 402 (520)
T PRK06484 347 LVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSI 402 (520)
T ss_pred EEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECch
Confidence 99988742 0133444556667999998776
No 203
>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=96.99 E-value=0.013 Score=52.42 Aligned_cols=95 Identities=22% Similarity=0.189 Sum_probs=67.1
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHCCC--eEEEEeCCchHHHHHHH---hcCCCEEEe-CCCH-HHHHHhcCCccEEEE
Q 022313 178 NQPGKSLGVIGLGGLGHMAVKFGKAFGL--NVTVLSTSTSKKEEALS---LLGADKFVV-SSDL-EQMKALGKSLDFIID 250 (299)
Q Consensus 178 ~~~g~~vlI~G~g~~G~~a~~~a~~~g~--~v~~~~~~~~~~~~~~~---~~g~~~v~~-~~~~-~~~~~~~~~~d~v~d 250 (299)
++++++||.+|+| .|..++.+++..+. .|+.++.+++..+.+++ +.|.+.+.. ..+. +.... ...||+|+.
T Consensus 78 i~~g~~VLDIG~G-tG~~a~~LA~~~~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i~gD~~~~~~~-~~~fD~Ii~ 155 (322)
T PRK13943 78 LDKGMRVLEIGGG-TGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFVCGDGYYGVPE-FAPYDVIFV 155 (322)
T ss_pred CCCCCEEEEEeCC-ccHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCChhhcccc-cCCccEEEE
Confidence 4889999999998 49999999998764 69999999876655533 456543321 1221 11111 257999999
Q ss_pred cCCCchhHHHHHHhcccCcEEEEE
Q 022313 251 TASGDHPFDAYMSLLKVAGVYVLV 274 (299)
Q Consensus 251 ~~g~~~~~~~~~~~l~~~G~~v~~ 274 (299)
+.+-.......++.++++|+++..
T Consensus 156 ~~g~~~ip~~~~~~LkpgG~Lvv~ 179 (322)
T PRK13943 156 TVGVDEVPETWFTQLKEGGRVIVP 179 (322)
T ss_pred CCchHHhHHHHHHhcCCCCEEEEE
Confidence 888666567788999999998763
No 204
>PRK08267 short chain dehydrogenase; Provisional
Probab=96.99 E-value=0.015 Score=50.08 Aligned_cols=73 Identities=22% Similarity=0.245 Sum_probs=53.4
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcC-C-CE--EEeCCCHHHHHH----h----cCCccEE
Q 022313 182 KSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLG-A-DK--FVVSSDLEQMKA----L----GKSLDFI 248 (299)
Q Consensus 182 ~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g-~-~~--v~~~~~~~~~~~----~----~~~~d~v 248 (299)
+++||.|+ |++|...++.+...|++|++++++.+..+++.+.++ . -+ ..|..+.+.+.+ . .+++|++
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~v 81 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLDVL 81 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCEE
Confidence 57899988 999999999998899999999999888877755544 1 11 224444433322 1 3578999
Q ss_pred EEcCCC
Q 022313 249 IDTASG 254 (299)
Q Consensus 249 ~d~~g~ 254 (299)
+.++|.
T Consensus 82 i~~ag~ 87 (260)
T PRK08267 82 FNNAGI 87 (260)
T ss_pred EECCCC
Confidence 999884
No 205
>PRK07806 short chain dehydrogenase; Provisional
Probab=96.98 E-value=0.0099 Score=50.71 Aligned_cols=98 Identities=26% Similarity=0.272 Sum_probs=63.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCch-HHHHHHHh---cCCC-EE--EeCCCHHHHHHh-------cCC
Q 022313 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTS-KKEEALSL---LGAD-KF--VVSSDLEQMKAL-------GKS 244 (299)
Q Consensus 180 ~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~-~~~~~~~~---~g~~-~v--~~~~~~~~~~~~-------~~~ 244 (299)
+++++||.|+ |.+|...+..+...|++|++++++.+ +.+.+.++ .+.. .. .|..+.+.+..+ .++
T Consensus 5 ~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (248)
T PRK07806 5 PGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEFGG 84 (248)
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence 4678999998 99999999999889999999888653 33333222 2322 12 244444443322 247
Q ss_pred ccEEEEcCCCc-------------------hhHHHHHHhcccCcEEEEEcCC
Q 022313 245 LDFIIDTASGD-------------------HPFDAYMSLLKVAGVYVLVGFP 277 (299)
Q Consensus 245 ~d~v~d~~g~~-------------------~~~~~~~~~l~~~G~~v~~g~~ 277 (299)
+|+++.+.+.. ..++.+.+.++.+|+++.++..
T Consensus 85 ~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~ 136 (248)
T PRK07806 85 LDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSH 136 (248)
T ss_pred CcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCc
Confidence 89999888642 2345556666667888888664
No 206
>PRK12550 shikimate 5-dehydrogenase; Reviewed
Probab=96.98 E-value=0.0068 Score=52.85 Aligned_cols=77 Identities=13% Similarity=0.265 Sum_probs=55.2
Q ss_pred HHHHhhhccCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCchHHHHHHHhcCCCEEEeCCCHHHHHHhcCCcc
Q 022313 168 VYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLD 246 (299)
Q Consensus 168 a~~al~~~~~~~~g~~vlI~G~g~~G~~a~~~a~~~g~-~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d 246 (299)
...+++.... ..+++++|+|+|+.+.+++..+...|+ +++++.|+.++.+.+.+.++.+. . +.. ....+|
T Consensus 110 f~~~L~~~~~-~~~~~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~~~~~----~--~~~--~~~~~d 180 (272)
T PRK12550 110 IAKLLASYQV-PPDLVVALRGSGGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELYGYEW----R--PDL--GGIEAD 180 (272)
T ss_pred HHHHHHhcCC-CCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhCCcc----h--hhc--ccccCC
Confidence 3445544333 456789999999999999999999998 79999999998888876665211 0 011 114589
Q ss_pred EEEEcCC
Q 022313 247 FIIDTAS 253 (299)
Q Consensus 247 ~v~d~~g 253 (299)
+|++|+.
T Consensus 181 lvINaTp 187 (272)
T PRK12550 181 ILVNVTP 187 (272)
T ss_pred EEEECCc
Confidence 9999876
No 207
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=96.97 E-value=0.0069 Score=52.28 Aligned_cols=75 Identities=23% Similarity=0.180 Sum_probs=55.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCC-EEE--eCCCHHHHHHh-------cCCccEE
Q 022313 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGAD-KFV--VSSDLEQMKAL-------GKSLDFI 248 (299)
Q Consensus 180 ~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~-~v~--~~~~~~~~~~~-------~~~~d~v 248 (299)
+++++||.|+ +++|...++.+...|++|+++++++++.+.+.++++.. ..+ |..+.+.+.++ .+.+|++
T Consensus 5 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 84 (263)
T PRK06200 5 HGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDCF 84 (263)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCCCCEE
Confidence 5688999988 89999999999999999999999988887776555531 222 33344333222 2578999
Q ss_pred EEcCCC
Q 022313 249 IDTASG 254 (299)
Q Consensus 249 ~d~~g~ 254 (299)
+.+.|.
T Consensus 85 i~~ag~ 90 (263)
T PRK06200 85 VGNAGI 90 (263)
T ss_pred EECCCC
Confidence 999883
No 208
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.96 E-value=0.016 Score=49.42 Aligned_cols=75 Identities=23% Similarity=0.188 Sum_probs=53.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcC--CC-EE--EeCCCHHHHHHh-------cCCcc
Q 022313 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLG--AD-KF--VVSSDLEQMKAL-------GKSLD 246 (299)
Q Consensus 180 ~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g--~~-~v--~~~~~~~~~~~~-------~~~~d 246 (299)
+++++||.|+ |.+|...++.+...|++|+++++++++.+.+.+.+. .. .+ .|..+.+.+..+ .+++|
T Consensus 4 ~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 83 (251)
T PRK07231 4 EGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGSVD 83 (251)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 4678999998 999999999988889999999999887766544433 11 12 234444444332 25789
Q ss_pred EEEEcCCC
Q 022313 247 FIIDTASG 254 (299)
Q Consensus 247 ~v~d~~g~ 254 (299)
+++.+.|.
T Consensus 84 ~vi~~ag~ 91 (251)
T PRK07231 84 ILVNNAGT 91 (251)
T ss_pred EEEECCCC
Confidence 99999875
No 209
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.96 E-value=0.019 Score=50.12 Aligned_cols=98 Identities=19% Similarity=0.212 Sum_probs=66.8
Q ss_pred CCCEEEEEcC---ChHHHHHHHHHHHCCCeEEEEeCCc---hHHHHHHHhcCCCEE--EeCCCHHHHHHh-------cCC
Q 022313 180 PGKSLGVIGL---GGLGHMAVKFGKAFGLNVTVLSTST---SKKEEALSLLGADKF--VVSSDLEQMKAL-------GKS 244 (299)
Q Consensus 180 ~g~~vlI~G~---g~~G~~a~~~a~~~g~~v~~~~~~~---~~~~~~~~~~g~~~v--~~~~~~~~~~~~-------~~~ 244 (299)
+++++||.|+ +++|++.++.+...|++|+++.+++ ++.+.+.++++.... .|-.+.+.+.++ .+.
T Consensus 4 ~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~i~~~~g~ 83 (274)
T PRK08415 4 KGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELGSDYVYELDVSKPEHFKSLAESLKKDLGK 83 (274)
T ss_pred CCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCceEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 4789999986 4899999999999999999998874 234444345553332 244454443322 267
Q ss_pred ccEEEEcCCCc-----------------------------hhHHHHHHhcccCcEEEEEcCC
Q 022313 245 LDFIIDTASGD-----------------------------HPFDAYMSLLKVAGVYVLVGFP 277 (299)
Q Consensus 245 ~d~v~d~~g~~-----------------------------~~~~~~~~~l~~~G~~v~~g~~ 277 (299)
+|+++++.|.. ...+.++..++.+|+++.++..
T Consensus 84 iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~ 145 (274)
T PRK08415 84 IDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYL 145 (274)
T ss_pred CCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecC
Confidence 99999998831 0234556677778999988765
No 210
>PLN00203 glutamyl-tRNA reductase
Probab=96.96 E-value=0.0077 Score=57.25 Aligned_cols=97 Identities=21% Similarity=0.335 Sum_probs=67.3
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCchHHHHHHHhcCCCEEEeCCCHHHHHHhcCCccEEEEcCCCchh-
Q 022313 180 PGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHP- 257 (299)
Q Consensus 180 ~g~~vlI~G~g~~G~~a~~~a~~~g~-~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~v~d~~g~~~~- 257 (299)
.+.+|+|+|+|.+|.++++.+...|+ +|+++.++.++.+.+.++++...+ .....+...+.....|+||.+++....
T Consensus 265 ~~kkVlVIGAG~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i-~~~~~~dl~~al~~aDVVIsAT~s~~pv 343 (519)
T PLN00203 265 ASARVLVIGAGKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEI-IYKPLDEMLACAAEADVVFTSTSSETPL 343 (519)
T ss_pred CCCEEEEEeCHHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCce-EeecHhhHHHHHhcCCEEEEccCCCCCe
Confidence 36889999999999999999999997 799999999998888777752211 111222333444789999999876442
Q ss_pred -HHHHHHhccc----Cc---EEEEEcCC
Q 022313 258 -FDAYMSLLKV----AG---VYVLVGFP 277 (299)
Q Consensus 258 -~~~~~~~l~~----~G---~~v~~g~~ 277 (299)
....++.+.+ .+ .+++++.+
T Consensus 344 I~~e~l~~~~~~~~~~~~~~~~IDLAvP 371 (519)
T PLN00203 344 FLKEHVEALPPASDTVGGKRLFVDISVP 371 (519)
T ss_pred eCHHHHHHhhhcccccCCCeEEEEeCCC
Confidence 3333333322 12 57888888
No 211
>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=96.94 E-value=0.0032 Score=61.81 Aligned_cols=75 Identities=17% Similarity=0.180 Sum_probs=56.2
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCch---------------------HHHHHHHhcCCCEEEeCCC--HH
Q 022313 180 PGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTS---------------------KKEEALSLLGADKFVVSSD--LE 236 (299)
Q Consensus 180 ~g~~vlI~G~g~~G~~a~~~a~~~g~~v~~~~~~~~---------------------~~~~~~~~~g~~~v~~~~~--~~ 236 (299)
.+++|+|+|+|+.|+.++..++..|.+|+++.+.+. +.+.+ +++|.+..++..- ..
T Consensus 309 ~~kkVaIIG~GpaGl~aA~~L~~~G~~Vtv~e~~~~~GG~l~~gip~~~l~~~~~~~~~~~~-~~~Gv~~~~~~~v~~~~ 387 (639)
T PRK12809 309 RSEKVAVIGAGPAGLGCADILARAGVQVDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIF-TAMGIDFHLNCEIGRDI 387 (639)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCCcEEEEeCCCCCCCeeeccCCcccCCHHHHHHHHHHH-HHCCeEEEcCCccCCcC
Confidence 489999999999999999999999999999987753 33444 6788766555431 11
Q ss_pred HHHHhcCCccEEEEcCCCc
Q 022313 237 QMKALGKSLDFIIDTASGD 255 (299)
Q Consensus 237 ~~~~~~~~~d~v~d~~g~~ 255 (299)
.+.++..++|.||.++|..
T Consensus 388 ~~~~l~~~~DaV~latGa~ 406 (639)
T PRK12809 388 TFSDLTSEYDAVFIGVGTY 406 (639)
T ss_pred CHHHHHhcCCEEEEeCCCC
Confidence 2334456899999999964
No 212
>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A.
Probab=96.94 E-value=0.0003 Score=53.71 Aligned_cols=50 Identities=36% Similarity=0.442 Sum_probs=35.9
Q ss_pred cCCCEEEeCCCHHHHHHhcCCccEEEEcCC--CchhHHHHHHhcccCcEEEEEcC
Q 022313 224 LGADKFVVSSDLEQMKALGKSLDFIIDTAS--GDHPFDAYMSLLKVAGVYVLVGF 276 (299)
Q Consensus 224 ~g~~~v~~~~~~~~~~~~~~~~d~v~d~~g--~~~~~~~~~~~l~~~G~~v~~g~ 276 (299)
+|+++++++++.+. .-.+++|+|||++| +...+..++++| ++|+++.++.
T Consensus 1 LGAd~vidy~~~~~--~~~~~~D~ViD~~g~~~~~~~~~~~~~l-~~G~~v~i~~ 52 (127)
T PF13602_consen 1 LGADEVIDYRDTDF--AGPGGVDVVIDTVGQTGESLLDASRKLL-PGGRVVSIGG 52 (127)
T ss_dssp CT-SEEEETTCSHH--HTTS-EEEEEESS-CCHHHCGGGCCCTE-EEEEEEEE-S
T ss_pred CCcCEEecCCCccc--cCCCCceEEEECCCCccHHHHHHHHHHC-CCCEEEEECC
Confidence 58999999986544 33589999999999 555346677788 9999999974
No 213
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=96.90 E-value=0.0043 Score=53.89 Aligned_cols=109 Identities=22% Similarity=0.308 Sum_probs=75.9
Q ss_pred HHHHHHhhhccCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHH---hcCCC-EEEeCCCHHHHHHh
Q 022313 166 ITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALS---LLGAD-KFVVSSDLEQMKAL 241 (299)
Q Consensus 166 ~ta~~al~~~~~~~~g~~vlI~G~g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~---~~g~~-~v~~~~~~~~~~~~ 241 (299)
..++..+.....+++|.+||=+|+|- |.+++.+|+..|++|+.++.+++..+.+.+ +.|.+ .+-. .....+.+
T Consensus 58 ~~k~~~~~~kl~L~~G~~lLDiGCGW-G~l~~~aA~~y~v~V~GvTlS~~Q~~~~~~r~~~~gl~~~v~v--~l~d~rd~ 134 (283)
T COG2230 58 RAKLDLILEKLGLKPGMTLLDIGCGW-GGLAIYAAEEYGVTVVGVTLSEEQLAYAEKRIAARGLEDNVEV--RLQDYRDF 134 (283)
T ss_pred HHHHHHHHHhcCCCCCCEEEEeCCCh-hHHHHHHHHHcCCEEEEeeCCHHHHHHHHHHHHHcCCCcccEE--Eecccccc
Confidence 44455555666679999999999974 778889999999999999999988776643 34533 1100 01223334
Q ss_pred cCCccEEE-----EcCCC---chhHHHHHHhcccCcEEEEEcCC
Q 022313 242 GKSLDFII-----DTASG---DHPFDAYMSLLKVAGVYVLVGFP 277 (299)
Q Consensus 242 ~~~~d~v~-----d~~g~---~~~~~~~~~~l~~~G~~v~~g~~ 277 (299)
.+.||.|+ +.+|. +..+..+-+.|+++|++++-...
T Consensus 135 ~e~fDrIvSvgmfEhvg~~~~~~ff~~~~~~L~~~G~~llh~I~ 178 (283)
T COG2230 135 EEPFDRIVSVGMFEHVGKENYDDFFKKVYALLKPGGRMLLHSIT 178 (283)
T ss_pred ccccceeeehhhHHHhCcccHHHHHHHHHhhcCCCceEEEEEec
Confidence 45688884 45554 23588889999999999876554
No 214
>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.89 E-value=0.0054 Score=58.21 Aligned_cols=74 Identities=18% Similarity=0.217 Sum_probs=55.2
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEEeCCCHHHHHHhcCCccEEEEcCCCch
Q 022313 178 NQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDH 256 (299)
Q Consensus 178 ~~~g~~vlI~G~g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~v~d~~g~~~ 256 (299)
+.++++|+|+|.|..|++++++++..|++|++++..+.+.+.+ ++.|...+...+..+.+ ..+|+|+.+.|-+.
T Consensus 9 ~~~~~~v~V~G~G~sG~aa~~~L~~~G~~v~~~D~~~~~~~~l-~~~g~~~~~~~~~~~~l----~~~D~VV~SpGi~~ 82 (488)
T PRK03369 9 LLPGAPVLVAGAGVTGRAVLAALTRFGARPTVCDDDPDALRPH-AERGVATVSTSDAVQQI----ADYALVVTSPGFRP 82 (488)
T ss_pred ccCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH-HhCCCEEEcCcchHhHh----hcCCEEEECCCCCC
Confidence 3678899999999999999999999999999999776666655 56787443222222222 45799999988653
No 215
>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=96.89 E-value=0.011 Score=49.65 Aligned_cols=96 Identities=24% Similarity=0.245 Sum_probs=65.2
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHCC--CeEEEEeCCchHHHHHHHh---cCCC--EEEeCCCHHHHHHhcCCccEEE
Q 022313 177 MNQPGKSLGVIGLGGLGHMAVKFGKAFG--LNVTVLSTSTSKKEEALSL---LGAD--KFVVSSDLEQMKALGKSLDFII 249 (299)
Q Consensus 177 ~~~~g~~vlI~G~g~~G~~a~~~a~~~g--~~v~~~~~~~~~~~~~~~~---~g~~--~v~~~~~~~~~~~~~~~~d~v~ 249 (299)
.++++++||-+|+|. |..+..+++..+ .+|+.++.+++-.+.+.+. .|.. .++..+..+... -..+||+|+
T Consensus 73 ~~~~g~~VLdIG~Gs-G~~t~~la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v~~~~gd~~~~~~-~~~~fD~I~ 150 (212)
T PRK13942 73 DLKEGMKVLEIGTGS-GYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKLGYDNVEVIVGDGTLGYE-ENAPYDRIY 150 (212)
T ss_pred CCCCcCEEEEECCcc-cHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCCC-cCCCcCEEE
Confidence 348999999999874 667777777665 5999999998877666433 3432 222222111111 126799998
Q ss_pred EcCCCchhHHHHHHhcccCcEEEEE
Q 022313 250 DTASGDHPFDAYMSLLKVAGVYVLV 274 (299)
Q Consensus 250 d~~g~~~~~~~~~~~l~~~G~~v~~ 274 (299)
-............+.|+++|+++..
T Consensus 151 ~~~~~~~~~~~l~~~LkpgG~lvi~ 175 (212)
T PRK13942 151 VTAAGPDIPKPLIEQLKDGGIMVIP 175 (212)
T ss_pred ECCCcccchHHHHHhhCCCcEEEEE
Confidence 7665555578889999999998765
No 216
>PRK12829 short chain dehydrogenase; Provisional
Probab=96.88 E-value=0.0092 Score=51.36 Aligned_cols=77 Identities=19% Similarity=0.175 Sum_probs=56.0
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCC--E--EEeCCCHHHHHHh-------cCCcc
Q 022313 179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGAD--K--FVVSSDLEQMKAL-------GKSLD 246 (299)
Q Consensus 179 ~~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~--~--v~~~~~~~~~~~~-------~~~~d 246 (299)
-+++++||.|+ |.+|...++.+...|++|++++++++..+.+.++.+.. . ..+..+.+.+.+. .+++|
T Consensus 9 ~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 88 (264)
T PRK12829 9 LDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVERFGGLD 88 (264)
T ss_pred cCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence 57789999998 99999999999999999999999887776664444322 2 2244444443322 25899
Q ss_pred EEEEcCCCc
Q 022313 247 FIIDTASGD 255 (299)
Q Consensus 247 ~v~d~~g~~ 255 (299)
+|+.+.|..
T Consensus 89 ~vi~~ag~~ 97 (264)
T PRK12829 89 VLVNNAGIA 97 (264)
T ss_pred EEEECCCCC
Confidence 999988854
No 217
>PRK12367 short chain dehydrogenase; Provisional
Probab=96.88 E-value=0.0082 Score=51.57 Aligned_cols=73 Identities=26% Similarity=0.247 Sum_probs=51.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCch-HHHHHHHhcCCCE--EEeCCCHHHHHHhcCCccEEEEcCCC
Q 022313 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTS-KKEEALSLLGADK--FVVSSDLEQMKALGKSLDFIIDTASG 254 (299)
Q Consensus 180 ~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~-~~~~~~~~~g~~~--v~~~~~~~~~~~~~~~~d~v~d~~g~ 254 (299)
++++++|.|+ |++|...++.+...|++|+++++++. ..+.. .-+... ..+..+.+.+.+.-+++|++++++|.
T Consensus 13 ~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~iDilVnnAG~ 89 (245)
T PRK12367 13 QGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSESN--DESPNEWIKWECGKEESLDKQLASLDVLILNHGI 89 (245)
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhh--ccCCCeEEEeeCCCHHHHHHhcCCCCEEEECCcc
Confidence 4678999998 89999999999999999999998762 22222 111112 23455555555555789999999984
No 218
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.87 E-value=0.011 Score=52.05 Aligned_cols=96 Identities=22% Similarity=0.208 Sum_probs=73.4
Q ss_pred cccchhhHHHHHHhhhccCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEEeCCCHHH
Q 022313 159 APLLCAGITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQ 237 (299)
Q Consensus 159 a~~~~~~~ta~~al~~~~~~~~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~ 237 (299)
..+||...+....++....--.|++|.|+|. +.+|.-.+.++...|++|++..+.....
T Consensus 137 ~~~PcTp~aii~lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~~l-------------------- 196 (301)
T PRK14194 137 VLTPCTPSGCLRLLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTDA-------------------- 196 (301)
T ss_pred CCCCCcHHHHHHHHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCCCH--------------------
Confidence 3567776777766766554468999999998 5999999999999999999986654322
Q ss_pred HHHhcCCccEEEEcCCCchhHHHHHHhcccCcEEEEEcCC
Q 022313 238 MKALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP 277 (299)
Q Consensus 238 ~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~ 277 (299)
.+..+..|+|+-++|.+..+...+ ++++..++++|..
T Consensus 197 -~e~~~~ADIVIsavg~~~~v~~~~--ik~GaiVIDvgin 233 (301)
T PRK14194 197 -KALCRQADIVVAAVGRPRLIDADW--LKPGAVVIDVGIN 233 (301)
T ss_pred -HHHHhcCCEEEEecCChhcccHhh--ccCCcEEEEeccc
Confidence 233356899999999887666554 8999999999855
No 219
>PRK07340 ornithine cyclodeaminase; Validated
Probab=96.87 E-value=0.0064 Score=53.99 Aligned_cols=107 Identities=15% Similarity=0.148 Sum_probs=75.5
Q ss_pred hccCCCCCCEEEEEcCChHHHHHHHHHHH-CCC-eEEEEeCCchHHHHHHHhcCCC--EEEeCCCHHHHHHhcCCccEEE
Q 022313 174 RHKMNQPGKSLGVIGLGGLGHMAVKFGKA-FGL-NVTVLSTSTSKKEEALSLLGAD--KFVVSSDLEQMKALGKSLDFII 249 (299)
Q Consensus 174 ~~~~~~~g~~vlI~G~g~~G~~a~~~a~~-~g~-~v~~~~~~~~~~~~~~~~~g~~--~v~~~~~~~~~~~~~~~~d~v~ 249 (299)
.... ....+++|+|+|..|.+.+..+.. .+. +|.+..+++++.+.+.+++... .+. .. ...+.-.+.|+|+
T Consensus 119 ~La~-~~~~~v~IiGaG~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~~~~~-~~---~~~~av~~aDiVi 193 (304)
T PRK07340 119 TLAP-APPGDLLLIGTGVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALGPTAE-PL---DGEAIPEAVDLVV 193 (304)
T ss_pred HhCC-CCCCEEEEECCcHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcCCeeE-EC---CHHHHhhcCCEEE
Confidence 3444 567899999999999998888864 565 8999999999888877776421 111 11 2233346899999
Q ss_pred EcCCCchhHHHHHHhcccCcEEEEEcCC--CceeeChhhh
Q 022313 250 DTASGDHPFDAYMSLLKVAGVYVLVGFP--SKVKFSPASL 287 (299)
Q Consensus 250 d~~g~~~~~~~~~~~l~~~G~~v~~g~~--~~~~~~~~~l 287 (299)
.++.....+-.. .++++-.+..+|.. ....++...+
T Consensus 194 taT~s~~Pl~~~--~~~~g~hi~~iGs~~p~~~El~~~~~ 231 (304)
T PRK07340 194 TATTSRTPVYPE--AARAGRLVVAVGAFTPDMAELAPRTV 231 (304)
T ss_pred EccCCCCceeCc--cCCCCCEEEecCCCCCCcccCCHHHH
Confidence 999876533333 37899999999987 5566665533
No 220
>PRK07825 short chain dehydrogenase; Provisional
Probab=96.85 E-value=0.011 Score=51.28 Aligned_cols=75 Identities=20% Similarity=0.219 Sum_probs=55.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEE--EeCCCHHHHHH-------hcCCccEEE
Q 022313 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKF--VVSSDLEQMKA-------LGKSLDFII 249 (299)
Q Consensus 180 ~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v--~~~~~~~~~~~-------~~~~~d~v~ 249 (299)
.++++||.|+ |++|...++.+...|++|+++++++++.+.+.++++...+ .|..+.+.+.+ ..++.|+++
T Consensus 4 ~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li 83 (273)
T PRK07825 4 RGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEADLGPIDVLV 83 (273)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 3678999998 9999999998888899999999998887776555552222 24445444322 236799999
Q ss_pred EcCCC
Q 022313 250 DTASG 254 (299)
Q Consensus 250 d~~g~ 254 (299)
.+.|.
T Consensus 84 ~~ag~ 88 (273)
T PRK07825 84 NNAGV 88 (273)
T ss_pred ECCCc
Confidence 99884
No 221
>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family. Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.
Probab=96.82 E-value=0.0088 Score=50.23 Aligned_cols=97 Identities=18% Similarity=0.087 Sum_probs=64.4
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEE----------------eCCCHHHHH-Hh
Q 022313 179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFV----------------VSSDLEQMK-AL 241 (299)
Q Consensus 179 ~~g~~vlI~G~g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~----------------~~~~~~~~~-~~ 241 (299)
.++.+||+.|+|. |.-++-+|. .|.+|++++.++...+.+.++.+..... -..|...+. +.
T Consensus 33 ~~~~rvLd~GCG~-G~da~~LA~-~G~~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~ 110 (213)
T TIGR03840 33 PAGARVFVPLCGK-SLDLAWLAE-QGHRVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCGDFFALTAAD 110 (213)
T ss_pred CCCCeEEEeCCCc-hhHHHHHHh-CCCeEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEccCCCCCccc
Confidence 5778999999974 778888875 6999999999999888865544432100 000000000 11
Q ss_pred cCCccEEEEcCCC--------chhHHHHHHhcccCcEEEEEcCC
Q 022313 242 GKSLDFIIDTASG--------DHPFDAYMSLLKVAGVYVLVGFP 277 (299)
Q Consensus 242 ~~~~d~v~d~~g~--------~~~~~~~~~~l~~~G~~v~~g~~ 277 (299)
.+.||.|+|+..- ...+..+.+.|+|+|+++.++..
T Consensus 111 ~~~fD~i~D~~~~~~l~~~~R~~~~~~l~~lLkpgG~~ll~~~~ 154 (213)
T TIGR03840 111 LGPVDAVYDRAALIALPEEMRQRYAAHLLALLPPGARQLLITLD 154 (213)
T ss_pred CCCcCEEEechhhccCCHHHHHHHHHHHHHHcCCCCeEEEEEEE
Confidence 2468999996541 22477889999999987766543
No 222
>PRK06196 oxidoreductase; Provisional
Probab=96.81 E-value=0.0099 Score=52.95 Aligned_cols=75 Identities=28% Similarity=0.369 Sum_probs=54.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEE--EeCCCHHHHHHh-------cCCccEEE
Q 022313 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKF--VVSSDLEQMKAL-------GKSLDFII 249 (299)
Q Consensus 180 ~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v--~~~~~~~~~~~~-------~~~~d~v~ 249 (299)
.+++++|.|+ |++|...+..+...|++|++++|+.++.+.+.+++..-.. .|..+.+.++++ .+++|+++
T Consensus 25 ~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~li 104 (315)
T PRK06196 25 SGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLDSGRRIDILI 104 (315)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence 5689999998 8999999999988999999999998877665444431122 244444444332 25799999
Q ss_pred EcCCC
Q 022313 250 DTASG 254 (299)
Q Consensus 250 d~~g~ 254 (299)
.++|.
T Consensus 105 ~nAg~ 109 (315)
T PRK06196 105 NNAGV 109 (315)
T ss_pred ECCCC
Confidence 99873
No 223
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=96.81 E-value=0.011 Score=51.07 Aligned_cols=74 Identities=27% Similarity=0.206 Sum_probs=53.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCC-EE--EeCCCHHHHHH----h---cCCccEE
Q 022313 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGAD-KF--VVSSDLEQMKA----L---GKSLDFI 248 (299)
Q Consensus 180 ~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~-~v--~~~~~~~~~~~----~---~~~~d~v 248 (299)
++++++|.|+ |++|...++.+...|++|++++++.++.+.+.+..+.. .. .|..+.+.+.+ . .+++|++
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 83 (262)
T TIGR03325 4 KGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGKIDCL 83 (262)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhCCCCEE
Confidence 5789999998 89999999999999999999999888777775444421 11 24444333322 1 2678999
Q ss_pred EEcCC
Q 022313 249 IDTAS 253 (299)
Q Consensus 249 ~d~~g 253 (299)
+.+.|
T Consensus 84 i~~Ag 88 (262)
T TIGR03325 84 IPNAG 88 (262)
T ss_pred EECCC
Confidence 99987
No 224
>PRK06500 short chain dehydrogenase; Provisional
Probab=96.78 E-value=0.012 Score=50.20 Aligned_cols=75 Identities=24% Similarity=0.227 Sum_probs=54.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCE-EE--eCCCHHHHHH-------hcCCccEE
Q 022313 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADK-FV--VSSDLEQMKA-------LGKSLDFI 248 (299)
Q Consensus 180 ~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~-v~--~~~~~~~~~~-------~~~~~d~v 248 (299)
++++++|.|+ |.+|...++.+...|++|++++++++..+.+.++++... .+ +..+.+.+.. ..+++|++
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 84 (249)
T PRK06500 5 QGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAFGRLDAV 84 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 4678999998 999999999999999999999998877776656666432 22 3333333222 12579999
Q ss_pred EEcCCC
Q 022313 249 IDTASG 254 (299)
Q Consensus 249 ~d~~g~ 254 (299)
+.+.|.
T Consensus 85 i~~ag~ 90 (249)
T PRK06500 85 FINAGV 90 (249)
T ss_pred EECCCC
Confidence 998874
No 225
>PRK07832 short chain dehydrogenase; Provisional
Probab=96.78 E-value=0.033 Score=48.36 Aligned_cols=73 Identities=21% Similarity=0.241 Sum_probs=51.2
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHh---cCCC--E--EEeCCCHHHHHHh-------cCCcc
Q 022313 182 KSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL---LGAD--K--FVVSSDLEQMKAL-------GKSLD 246 (299)
Q Consensus 182 ~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~---~g~~--~--v~~~~~~~~~~~~-------~~~~d 246 (299)
++++|.|+ |++|...++.+...|++|++++++++..+.+.++ .+.. . ..|..+.+.+.++ .+++|
T Consensus 1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMD 80 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence 36899988 9999999999999999999999987765554333 2322 1 2355554443322 25789
Q ss_pred EEEEcCCC
Q 022313 247 FIIDTASG 254 (299)
Q Consensus 247 ~v~d~~g~ 254 (299)
+++.+.|.
T Consensus 81 ~lv~~ag~ 88 (272)
T PRK07832 81 VVMNIAGI 88 (272)
T ss_pred EEEECCCC
Confidence 99999984
No 226
>CHL00194 ycf39 Ycf39; Provisional
Probab=96.78 E-value=0.017 Score=51.49 Aligned_cols=94 Identities=26% Similarity=0.202 Sum_probs=64.6
Q ss_pred EEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEE-eCCCHHHHHHhcCCccEEEEcCCCch----
Q 022313 183 SLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFV-VSSDLEQMKALGKSLDFIIDTASGDH---- 256 (299)
Q Consensus 183 ~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~-~~~~~~~~~~~~~~~d~v~d~~g~~~---- 256 (299)
+|+|+|+ |.+|...++.+...|.+|++++|+.++...+ +..+.+.+. |..+.+.+.+.-.++|+||.+++...
T Consensus 2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l-~~~~v~~v~~Dl~d~~~l~~al~g~d~Vi~~~~~~~~~~~ 80 (317)
T CHL00194 2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFL-KEWGAELVYGDLSLPETLPPSFKGVTAIIDASTSRPSDLY 80 (317)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhH-hhcCCEEEECCCCCHHHHHHHHCCCCEEEECCCCCCCCcc
Confidence 6899998 9999999999998999999999987655444 344544332 44456666665578999999876321
Q ss_pred --------hHHHHHHhcccCc--EEEEEcCC
Q 022313 257 --------PFDAYMSLLKVAG--VYVLVGFP 277 (299)
Q Consensus 257 --------~~~~~~~~l~~~G--~~v~~g~~ 277 (299)
....+++..+..| +++.++..
T Consensus 81 ~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~ 111 (317)
T CHL00194 81 NAKQIDWDGKLALIEAAKAAKIKRFIFFSIL 111 (317)
T ss_pred chhhhhHHHHHHHHHHHHHcCCCEEEEeccc
Confidence 1133445555444 78877664
No 227
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph
Probab=96.78 E-value=0.019 Score=48.71 Aligned_cols=109 Identities=12% Similarity=0.110 Sum_probs=68.5
Q ss_pred hhHHHHHHhhhccCCCCCCEEEEEcCChHHHHHHHHHHHCCCe---EEEEeCC----chHH-------HHHHHhcCCCEE
Q 022313 164 AGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLN---VTVLSTS----TSKK-------EEALSLLGADKF 229 (299)
Q Consensus 164 ~~~ta~~al~~~~~~~~g~~vlI~G~g~~G~~a~~~a~~~g~~---v~~~~~~----~~~~-------~~~~~~~g~~~v 229 (299)
.+.....+++....--++.+++|+|+|+.|..++..+...|.+ +++++++ .++. +.+.++++...
T Consensus 8 ~lAG~~~al~~~g~~l~~~rvlvlGAGgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~- 86 (226)
T cd05311 8 TLAGLLNALKLVGKKIEEVKIVINGAGAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEK- 86 (226)
T ss_pred HHHHHHHHHHHhCCCccCCEEEEECchHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCc-
Confidence 3344455665544325678999999999999999999988974 9999988 3432 23334443221
Q ss_pred EeCCCHHHHHHhcCCccEEEEcCCCchhHHHHHHhcccCcEEEEEcCC
Q 022313 230 VVSSDLEQMKALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP 277 (299)
Q Consensus 230 ~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~ 277 (299)
.. . .+.+.-.++|+++++++........++.+.++..++.+-.+
T Consensus 87 ~~-~---~l~~~l~~~dvlIgaT~~G~~~~~~l~~m~~~~ivf~lsnP 130 (226)
T cd05311 87 TG-G---TLKEALKGADVFIGVSRPGVVKKEMIKKMAKDPIVFALANP 130 (226)
T ss_pred cc-C---CHHHHHhcCCEEEeCCCCCCCCHHHHHhhCCCCEEEEeCCC
Confidence 11 1 12122245899999997433234667777777766655433
No 228
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=96.77 E-value=0.036 Score=46.24 Aligned_cols=91 Identities=13% Similarity=0.111 Sum_probs=61.5
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCch-HHHHHHHhcCCCEEEeCCCHHHHHHhcCCccEEEEcCCCchhH
Q 022313 180 PGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTS-KKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHPF 258 (299)
Q Consensus 180 ~g~~vlI~G~g~~G~~a~~~a~~~g~~v~~~~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~v~d~~g~~~~~ 258 (299)
.|++|+|+|+|.+|...++.+...|++|++++.... ..+.+. +.|.-..+...-. ...-.++|+|+-+++.+..-
T Consensus 8 ~gk~vlVvGgG~va~rk~~~Ll~~ga~VtVvsp~~~~~l~~l~-~~~~i~~~~~~~~---~~dl~~~~lVi~at~d~~ln 83 (205)
T TIGR01470 8 EGRAVLVVGGGDVALRKARLLLKAGAQLRVIAEELESELTLLA-EQGGITWLARCFD---ADILEGAFLVIAATDDEELN 83 (205)
T ss_pred CCCeEEEECcCHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHHH-HcCCEEEEeCCCC---HHHhCCcEEEEECCCCHHHH
Confidence 568999999999999999999999999999987643 344442 3342122221111 11126799999999998644
Q ss_pred HHHHHhcccCcEEEEE
Q 022313 259 DAYMSLLKVAGVYVLV 274 (299)
Q Consensus 259 ~~~~~~l~~~G~~v~~ 274 (299)
.......+..|..+.+
T Consensus 84 ~~i~~~a~~~~ilvn~ 99 (205)
T TIGR01470 84 RRVAHAARARGVPVNV 99 (205)
T ss_pred HHHHHHHHHcCCEEEE
Confidence 5556666666776654
No 229
>TIGR02992 ectoine_eutC ectoine utilization protein EutC. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. This family belongs to the ornithine cyclodeaminase/mu-crystallin family (pfam02423).
Probab=96.76 E-value=0.0088 Score=53.68 Aligned_cols=102 Identities=18% Similarity=0.264 Sum_probs=69.7
Q ss_pred CCCCEEEEEcCChHHHHHHHHHH-HCCC-eEEEEeCCchHHHHHHHhc----CCCEEEeCCCHHHHHHhcCCccEEEEcC
Q 022313 179 QPGKSLGVIGLGGLGHMAVKFGK-AFGL-NVTVLSTSTSKKEEALSLL----GADKFVVSSDLEQMKALGKSLDFIIDTA 252 (299)
Q Consensus 179 ~~g~~vlI~G~g~~G~~a~~~a~-~~g~-~v~~~~~~~~~~~~~~~~~----g~~~v~~~~~~~~~~~~~~~~d~v~d~~ 252 (299)
+..++++|+|+|..+.+.+..+. ..+. +|.+..|+.++.+.+.+++ |.+ +....+ +.+.-.+.|+|+.++
T Consensus 127 ~~~~~v~iiGaG~qA~~~~~al~~~~~i~~v~V~~R~~~~a~~~a~~~~~~~g~~-v~~~~~---~~~av~~aDiVvtaT 202 (326)
T TIGR02992 127 EDSSVVAIFGAGMQARLQLEALTLVRDIRSARIWARDSAKAEALALQLSSLLGID-VTAATD---PRAAMSGADIIVTTT 202 (326)
T ss_pred CCCcEEEEECCCHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhhcCce-EEEeCC---HHHHhccCCEEEEec
Confidence 45678999999999988888776 4665 8999999999888776655 432 222222 233336899999999
Q ss_pred CCchhHHHHHHhcccCcEEEEEcCC--CceeeChh
Q 022313 253 SGDHPFDAYMSLLKVAGVYVLVGFP--SKVKFSPA 285 (299)
Q Consensus 253 g~~~~~~~~~~~l~~~G~~v~~g~~--~~~~~~~~ 285 (299)
+....+ -..+.++++-.+..+|.. ....+++.
T Consensus 203 ~s~~p~-i~~~~l~~g~~i~~vg~~~p~~rEld~~ 236 (326)
T TIGR02992 203 PSETPI-LHAEWLEPGQHVTAMGSDAEHKNEIDPA 236 (326)
T ss_pred CCCCcE-ecHHHcCCCcEEEeeCCCCCCceecCHH
Confidence 875421 123468888888888876 34444443
No 230
>PRK05866 short chain dehydrogenase; Provisional
Probab=96.76 E-value=0.0069 Score=53.45 Aligned_cols=75 Identities=24% Similarity=0.321 Sum_probs=53.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhc---CCC-EE--EeCCCHHHHHHh-------cCCc
Q 022313 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL---GAD-KF--VVSSDLEQMKAL-------GKSL 245 (299)
Q Consensus 180 ~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~---g~~-~v--~~~~~~~~~~~~-------~~~~ 245 (299)
.+++++|.|+ |++|...++.+...|++|++++++.++.+.+.+++ +.+ .+ .|..+.+.+.++ .+++
T Consensus 39 ~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~i 118 (293)
T PRK05866 39 TGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIGGV 118 (293)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 4578999998 99999999999889999999999988776654433 322 12 233444443332 2579
Q ss_pred cEEEEcCCC
Q 022313 246 DFIIDTASG 254 (299)
Q Consensus 246 d~v~d~~g~ 254 (299)
|+++.+.|.
T Consensus 119 d~li~~AG~ 127 (293)
T PRK05866 119 DILINNAGR 127 (293)
T ss_pred CEEEECCCC
Confidence 999999874
No 231
>PRK04457 spermidine synthase; Provisional
Probab=96.75 E-value=0.036 Score=48.13 Aligned_cols=95 Identities=19% Similarity=0.227 Sum_probs=67.3
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCC-CeEEEEeCCchHHHHHHHhcCC----C--EEEeCCCHHHHHHhcCCccEEEEc
Q 022313 179 QPGKSLGVIGLGGLGHMAVKFGKAFG-LNVTVLSTSTSKKEEALSLLGA----D--KFVVSSDLEQMKALGKSLDFIIDT 251 (299)
Q Consensus 179 ~~g~~vlI~G~g~~G~~a~~~a~~~g-~~v~~~~~~~~~~~~~~~~~g~----~--~v~~~~~~~~~~~~~~~~d~v~d~ 251 (299)
.+.++||++|.|+ |..+..+++... .++++++.+++-.+.+.+.++. + +++..+..+.+....+.+|+|+-.
T Consensus 65 ~~~~~vL~IG~G~-G~l~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~rv~v~~~Da~~~l~~~~~~yD~I~~D 143 (262)
T PRK04457 65 PRPQHILQIGLGG-GSLAKFIYTYLPDTRQTAVEINPQVIAVARNHFELPENGERFEVIEADGAEYIAVHRHSTDVILVD 143 (262)
T ss_pred CCCCEEEEECCCH-hHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHcCCCCCCCceEEEECCHHHHHHhCCCCCCEEEEe
Confidence 4567899999875 777777877764 5999999999988888665652 1 334444344555555789999743
Q ss_pred C-C-C--------chhHHHHHHhcccCcEEEEE
Q 022313 252 A-S-G--------DHPFDAYMSLLKVAGVYVLV 274 (299)
Q Consensus 252 ~-g-~--------~~~~~~~~~~l~~~G~~v~~ 274 (299)
. . . ...++.+.+.|+++|.++..
T Consensus 144 ~~~~~~~~~~l~t~efl~~~~~~L~pgGvlvin 176 (262)
T PRK04457 144 GFDGEGIIDALCTQPFFDDCRNALSSDGIFVVN 176 (262)
T ss_pred CCCCCCCccccCcHHHHHHHHHhcCCCcEEEEE
Confidence 2 1 1 24578889999999999873
No 232
>PRK07502 cyclohexadienyl dehydrogenase; Validated
Probab=96.74 E-value=0.014 Score=51.87 Aligned_cols=91 Identities=21% Similarity=0.228 Sum_probs=64.1
Q ss_pred CEEEEEcCChHHHHHHHHHHHCCC--eEEEEeCCchHHHHHHHhcCCCEEEeCCCHHHHHHhcCCccEEEEcCCCch---
Q 022313 182 KSLGVIGLGGLGHMAVKFGKAFGL--NVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDH--- 256 (299)
Q Consensus 182 ~~vlI~G~g~~G~~a~~~a~~~g~--~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~v~d~~g~~~--- 256 (299)
.+|.|+|.|.+|...+..++..|. +|+++++++++.+.+ ++.|........ ..+.....|+|+.|+....
T Consensus 7 ~~I~IIG~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a-~~~g~~~~~~~~----~~~~~~~aDvViiavp~~~~~~ 81 (307)
T PRK07502 7 DRVALIGIGLIGSSLARAIRRLGLAGEIVGADRSAETRARA-RELGLGDRVTTS----AAEAVKGADLVILCVPVGASGA 81 (307)
T ss_pred cEEEEEeeCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHH-HhCCCCceecCC----HHHHhcCCCEEEECCCHHHHHH
Confidence 579999999999999998888884 899999998888777 467742211111 1223367899999998754
Q ss_pred hHHHHHHhcccCcEEEEEcCC
Q 022313 257 PFDAYMSLLKVAGVYVLVGFP 277 (299)
Q Consensus 257 ~~~~~~~~l~~~G~~v~~g~~ 277 (299)
.+......++++..++++|..
T Consensus 82 v~~~l~~~l~~~~iv~dvgs~ 102 (307)
T PRK07502 82 VAAEIAPHLKPGAIVTDVGSV 102 (307)
T ss_pred HHHHHHhhCCCCCEEEeCccc
Confidence 133344566777777777764
No 233
>PRK07063 short chain dehydrogenase; Provisional
Probab=96.73 E-value=0.011 Score=50.85 Aligned_cols=75 Identities=23% Similarity=0.220 Sum_probs=53.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhc-----CCC-EE--EeCCCHHHHHHh-------cC
Q 022313 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL-----GAD-KF--VVSSDLEQMKAL-------GK 243 (299)
Q Consensus 180 ~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~-----g~~-~v--~~~~~~~~~~~~-------~~ 243 (299)
++++++|.|+ |++|...++.+...|++|+++++++++.+.+.+++ +.. .+ .|..+.+.+.++ .+
T Consensus 6 ~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 85 (260)
T PRK07063 6 AGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAFG 85 (260)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 4688999998 89999999999999999999999888776654443 211 12 244444433322 25
Q ss_pred CccEEEEcCCC
Q 022313 244 SLDFIIDTASG 254 (299)
Q Consensus 244 ~~d~v~d~~g~ 254 (299)
++|+++.+.|.
T Consensus 86 ~id~li~~ag~ 96 (260)
T PRK07063 86 PLDVLVNNAGI 96 (260)
T ss_pred CCcEEEECCCc
Confidence 79999999883
No 234
>PRK08263 short chain dehydrogenase; Provisional
Probab=96.73 E-value=0.037 Score=48.09 Aligned_cols=74 Identities=18% Similarity=0.122 Sum_probs=53.2
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCC-EE--EeCCCHHHHHHh-------cCCccEEE
Q 022313 181 GKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGAD-KF--VVSSDLEQMKAL-------GKSLDFII 249 (299)
Q Consensus 181 g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~-~v--~~~~~~~~~~~~-------~~~~d~v~ 249 (299)
++++||.|+ |.+|...++.+...|++|++++++.+..+.+.+.++.. .. .|..+.+.+.+. .+++|.++
T Consensus 3 ~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi 82 (275)
T PRK08263 3 EKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDIVV 82 (275)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 468999998 99999999998888999999999988877665544422 12 233344333222 25789999
Q ss_pred EcCCC
Q 022313 250 DTASG 254 (299)
Q Consensus 250 d~~g~ 254 (299)
.+.|.
T Consensus 83 ~~ag~ 87 (275)
T PRK08263 83 NNAGY 87 (275)
T ss_pred ECCCC
Confidence 99884
No 235
>COG3288 PntA NAD/NADP transhydrogenase alpha subunit [Energy production and conversion]
Probab=96.72 E-value=0.0076 Score=52.39 Aligned_cols=120 Identities=22% Similarity=0.223 Sum_probs=83.4
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEEeCCCH-----------HH-------HHH
Q 022313 179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDL-----------EQ-------MKA 240 (299)
Q Consensus 179 ~~g~~vlI~G~g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~-----------~~-------~~~ 240 (299)
.++.++++.|.|..|+.++..++..|+-|...+....+.++- +++|+.-.-..+++ +. +.+
T Consensus 162 v~pA~vlv~G~Gvagl~aiata~~lG~iVt~rdlrm~~Keqv-~s~Ga~f~~~~~ee~~gGYAk~ms~~~~~~q~~~~a~ 240 (356)
T COG3288 162 VSPAKVLVIGAGVAGLAAIATAVRLGAIVTARDLRMFKKEQV-ESLGAKFLAVEDEESAGGYAKEMSEEFIAKQAELVAE 240 (356)
T ss_pred ccchhhhhhhHHHHHHHHHHHHhhcceEEehhhhhhHHhhhh-hhcccccccccccccCCCccccCCHHHHHHHHHHHHH
Confidence 677889999999999999999999999999988888887776 56775332211111 11 112
Q ss_pred hcCCccEEEEcCC--C----chhHHHHHHhcccCcEEEEEcCC--Ccee--eChhhhhcCCeeeeeecC
Q 022313 241 LGKSLDFIIDTAS--G----DHPFDAYMSLLKVAGVYVLVGFP--SKVK--FSPASLNIGNAPLFRFKS 299 (299)
Q Consensus 241 ~~~~~d~v~d~~g--~----~~~~~~~~~~l~~~G~~v~~g~~--~~~~--~~~~~l~~~~~~~~g~~~ 299 (299)
..+++|+||-+.- + ..........|+||+.++++..- +... -+-.....++.+|+|+.+
T Consensus 241 ~~~~~DivITTAlIPGrpAP~Lvt~~mv~sMkpGSViVDlAa~~GGNce~t~pg~~v~~~gV~iig~~n 309 (356)
T COG3288 241 QAKEVDIVITTALIPGRPAPKLVTAEMVASMKPGSVIVDLAAETGGNCELTEPGKVVTKNGVKIIGYTN 309 (356)
T ss_pred HhcCCCEEEEecccCCCCCchhhHHHHHHhcCCCcEEEEehhhcCCCcccccCCeEEEeCCeEEEeecC
Confidence 2479999998643 2 23567788999999999999655 2222 122334466888888864
No 236
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=96.72 E-value=0.025 Score=47.11 Aligned_cols=92 Identities=11% Similarity=0.058 Sum_probs=57.8
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCch-HHHHHHHhcCCCEEEeCCCHHHHHHhcCCccEEEEcCCCchh
Q 022313 179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTS-KKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHP 257 (299)
Q Consensus 179 ~~g~~vlI~G~g~~G~~a~~~a~~~g~~v~~~~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~v~d~~g~~~~ 257 (299)
-.+++|+|+|+|.+|...++.+...|++|+++.+... +...+.++ +.-. ....... ...-.++|+||-+++.+.
T Consensus 8 l~~k~vLVIGgG~va~~ka~~Ll~~ga~V~VIs~~~~~~l~~l~~~-~~i~-~~~~~~~--~~~l~~adlViaaT~d~e- 82 (202)
T PRK06718 8 LSNKRVVIVGGGKVAGRRAITLLKYGAHIVVISPELTENLVKLVEE-GKIR-WKQKEFE--PSDIVDAFLVIAATNDPR- 82 (202)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCHHHHHHHhC-CCEE-EEecCCC--hhhcCCceEEEEcCCCHH-
Confidence 3678999999999999999988889999999876532 23333222 2111 1111100 111267899999999987
Q ss_pred HHHHHHhcccCcEEEEEc
Q 022313 258 FDAYMSLLKVAGVYVLVG 275 (299)
Q Consensus 258 ~~~~~~~l~~~G~~v~~g 275 (299)
.+..+...+..+.++.+.
T Consensus 83 lN~~i~~~a~~~~lvn~~ 100 (202)
T PRK06718 83 VNEQVKEDLPENALFNVI 100 (202)
T ss_pred HHHHHHHHHHhCCcEEEC
Confidence 555554444445555553
No 237
>PRK07062 short chain dehydrogenase; Provisional
Probab=96.69 E-value=0.013 Score=50.52 Aligned_cols=75 Identities=19% Similarity=0.222 Sum_probs=53.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhc----CCCE----EEeCCCHHHHHHh-------cC
Q 022313 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL----GADK----FVVSSDLEQMKAL-------GK 243 (299)
Q Consensus 180 ~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~----g~~~----v~~~~~~~~~~~~-------~~ 243 (299)
.+++++|.|+ +++|...++.+...|++|+++++++++.+...+++ +... ..|..+.+.+.++ .+
T Consensus 7 ~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 86 (265)
T PRK07062 7 EGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEARFG 86 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 5789999998 89999999999999999999999987766543332 2112 1244454443322 26
Q ss_pred CccEEEEcCCC
Q 022313 244 SLDFIIDTASG 254 (299)
Q Consensus 244 ~~d~v~d~~g~ 254 (299)
++|++++++|.
T Consensus 87 ~id~li~~Ag~ 97 (265)
T PRK07062 87 GVDMLVNNAGQ 97 (265)
T ss_pred CCCEEEECCCC
Confidence 79999999984
No 238
>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins. This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.
Probab=96.69 E-value=0.0072 Score=46.27 Aligned_cols=83 Identities=18% Similarity=0.246 Sum_probs=53.4
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEe-CCchHHHHHHHhcCCCEEEeCCCHHHHHHhcCCccEEEEcCCCchh
Q 022313 179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLS-TSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHP 257 (299)
Q Consensus 179 ~~g~~vlI~G~g~~G~~a~~~a~~~g~~v~~~~-~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~v~d~~g~~~~ 257 (299)
.+.-+|-|+|+|-+|......++..|..|..+. ++.+..+++.+.++...+.+. .+.....|++|-++.+..
T Consensus 8 ~~~l~I~iIGaGrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~~~~~------~~~~~~aDlv~iavpDda- 80 (127)
T PF10727_consen 8 AARLKIGIIGAGRVGTALARALARAGHEVVGVYSRSPASAERAAAFIGAGAILDL------EEILRDADLVFIAVPDDA- 80 (127)
T ss_dssp ----EEEEECTSCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-----T------TGGGCC-SEEEE-S-CCH-
T ss_pred CCccEEEEECCCHHHHHHHHHHHHCCCeEEEEEeCCccccccccccccccccccc------ccccccCCEEEEEechHH-
Confidence 344678999999999999999999999887764 666666777555665444433 234578999999999987
Q ss_pred HHHHHHhcccC
Q 022313 258 FDAYMSLLKVA 268 (299)
Q Consensus 258 ~~~~~~~l~~~ 268 (299)
+..+.+.|...
T Consensus 81 I~~va~~La~~ 91 (127)
T PF10727_consen 81 IAEVAEQLAQY 91 (127)
T ss_dssp HHHHHHHHHCC
T ss_pred HHHHHHHHHHh
Confidence 77777777655
No 239
>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4). All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....
Probab=96.69 E-value=0.0032 Score=54.97 Aligned_cols=97 Identities=27% Similarity=0.301 Sum_probs=58.9
Q ss_pred hhccCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHH---hcCCC--EEEeCCCHHHHHHhcCCccE
Q 022313 173 MRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALS---LLGAD--KFVVSSDLEQMKALGKSLDF 247 (299)
Q Consensus 173 ~~~~~~~~g~~vlI~G~g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~---~~g~~--~v~~~~~~~~~~~~~~~~d~ 247 (299)
-....+++|++||-+|+| -|-.+..+++..|++|+.++.+++..+.+.+ +.|.. .-+...+ ..++...||.
T Consensus 55 ~~~~~l~~G~~vLDiGcG-wG~~~~~~a~~~g~~v~gitlS~~Q~~~a~~~~~~~gl~~~v~v~~~D---~~~~~~~fD~ 130 (273)
T PF02353_consen 55 CEKLGLKPGDRVLDIGCG-WGGLAIYAAERYGCHVTGITLSEEQAEYARERIREAGLEDRVEVRLQD---YRDLPGKFDR 130 (273)
T ss_dssp HTTTT--TT-EEEEES-T-TSHHHHHHHHHH--EEEEEES-HHHHHHHHHHHHCSTSSSTEEEEES----GGG---S-SE
T ss_pred HHHhCCCCCCEEEEeCCC-ccHHHHHHHHHcCcEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEee---ccccCCCCCE
Confidence 334456999999999997 5777888999889999999999988877643 33421 1121222 2233458999
Q ss_pred EEE-----cCCCc---hhHHHHHHhcccCcEEEE
Q 022313 248 IID-----TASGD---HPFDAYMSLLKVAGVYVL 273 (299)
Q Consensus 248 v~d-----~~g~~---~~~~~~~~~l~~~G~~v~ 273 (299)
|+. .+|.. ..++.+.+.|+|+|+++.
T Consensus 131 IvSi~~~Ehvg~~~~~~~f~~~~~~LkpgG~~~l 164 (273)
T PF02353_consen 131 IVSIEMFEHVGRKNYPAFFRKISRLLKPGGRLVL 164 (273)
T ss_dssp EEEESEGGGTCGGGHHHHHHHHHHHSETTEEEEE
T ss_pred EEEEechhhcChhHHHHHHHHHHHhcCCCcEEEE
Confidence 854 44432 347888899999999874
No 240
>PRK07576 short chain dehydrogenase; Provisional
Probab=96.67 E-value=0.011 Score=51.28 Aligned_cols=75 Identities=25% Similarity=0.266 Sum_probs=52.6
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhc---CCC-EE--EeCCCHHHHHHh-------cCC
Q 022313 179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL---GAD-KF--VVSSDLEQMKAL-------GKS 244 (299)
Q Consensus 179 ~~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~---g~~-~v--~~~~~~~~~~~~-------~~~ 244 (299)
-+++++||.|+ |++|...++.+...|++|+++++++++.+...+++ +.. .+ .|..+.+.+.++ .++
T Consensus 7 ~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~~ 86 (264)
T PRK07576 7 FAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFGP 86 (264)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 36789999998 89999999999999999999999877665443333 222 12 244444443332 257
Q ss_pred ccEEEEcCC
Q 022313 245 LDFIIDTAS 253 (299)
Q Consensus 245 ~d~v~d~~g 253 (299)
+|+++.+.|
T Consensus 87 iD~vi~~ag 95 (264)
T PRK07576 87 IDVLVSGAA 95 (264)
T ss_pred CCEEEECCC
Confidence 899998876
No 241
>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]
Probab=96.67 E-value=0.019 Score=48.42 Aligned_cols=92 Identities=23% Similarity=0.344 Sum_probs=62.8
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHH---hcCCCEEEeCCC--HHHHHHhcCCccEEEE---
Q 022313 179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALS---LLGADKFVVSSD--LEQMKALGKSLDFIID--- 250 (299)
Q Consensus 179 ~~g~~vlI~G~g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~---~~g~~~v~~~~~--~~~~~~~~~~~d~v~d--- 250 (299)
-+|.+||=+|+|+ |+++.-+|+ .|++|+.++-+++-.+.++. +-|.. +++.. .+.+.+.++.||+|+.
T Consensus 58 l~g~~vLDvGCGg-G~Lse~mAr-~Ga~VtgiD~se~~I~~Ak~ha~e~gv~--i~y~~~~~edl~~~~~~FDvV~cmEV 133 (243)
T COG2227 58 LPGLRVLDVGCGG-GILSEPLAR-LGASVTGIDASEKPIEVAKLHALESGVN--IDYRQATVEDLASAGGQFDVVTCMEV 133 (243)
T ss_pred CCCCeEEEecCCc-cHhhHHHHH-CCCeeEEecCChHHHHHHHHhhhhcccc--ccchhhhHHHHHhcCCCccEEEEhhH
Confidence 4788888889854 566666666 58999999999988887741 22222 23332 2333333478999965
Q ss_pred --cCCCch-hHHHHHHhcccCcEEEEE
Q 022313 251 --TASGDH-PFDAYMSLLKVAGVYVLV 274 (299)
Q Consensus 251 --~~g~~~-~~~~~~~~l~~~G~~v~~ 274 (299)
-+..+. .++.+.++++|+|.++.-
T Consensus 134 lEHv~dp~~~~~~c~~lvkP~G~lf~S 160 (243)
T COG2227 134 LEHVPDPESFLRACAKLVKPGGILFLS 160 (243)
T ss_pred HHccCCHHHHHHHHHHHcCCCcEEEEe
Confidence 344433 588899999999988764
No 242
>PRK09072 short chain dehydrogenase; Provisional
Probab=96.65 E-value=0.035 Score=47.90 Aligned_cols=75 Identities=17% Similarity=0.228 Sum_probs=53.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhc--C-CCEE--EeCCCHHHHHHh------cCCccE
Q 022313 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL--G-ADKF--VVSSDLEQMKAL------GKSLDF 247 (299)
Q Consensus 180 ~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~--g-~~~v--~~~~~~~~~~~~------~~~~d~ 247 (299)
+++++||.|+ |++|...++.+...|++|+++++++++.+.+.+++ + .... .|..+.+.+.++ .+++|.
T Consensus 4 ~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~id~ 83 (263)
T PRK09072 4 KDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMGGINV 83 (263)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcCCCCE
Confidence 4678999987 99999999999999999999999988777664443 2 1112 233344333222 257899
Q ss_pred EEEcCCC
Q 022313 248 IIDTASG 254 (299)
Q Consensus 248 v~d~~g~ 254 (299)
++.++|.
T Consensus 84 lv~~ag~ 90 (263)
T PRK09072 84 LINNAGV 90 (263)
T ss_pred EEECCCC
Confidence 9999874
No 243
>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=96.65 E-value=0.029 Score=46.81 Aligned_cols=95 Identities=23% Similarity=0.192 Sum_probs=64.6
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHCC--CeEEEEeCCchHHHHHHHh---cCCC---EEEeCCCHHHHHHhcCCccEEE
Q 022313 178 NQPGKSLGVIGLGGLGHMAVKFGKAFG--LNVTVLSTSTSKKEEALSL---LGAD---KFVVSSDLEQMKALGKSLDFII 249 (299)
Q Consensus 178 ~~~g~~vlI~G~g~~G~~a~~~a~~~g--~~v~~~~~~~~~~~~~~~~---~g~~---~v~~~~~~~~~~~~~~~~d~v~ 249 (299)
++++++||=+|+|. |..+..+++..+ .+|+.++.+++-.+.+.+. .+.. .++..+-.+.+. ..+.||+|+
T Consensus 70 ~~~~~~VLDiG~Gs-G~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~~d~~~~~~-~~~~fD~Ii 147 (205)
T PRK13944 70 PRPGMKILEVGTGS-GYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYHGDGKRGLE-KHAPFDAII 147 (205)
T ss_pred CCCCCEEEEECcCc-cHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEECCcccCCc-cCCCccEEE
Confidence 47889999999864 777777777664 5899999998876655433 3432 233322211111 135899998
Q ss_pred EcCCCchhHHHHHHhcccCcEEEEE
Q 022313 250 DTASGDHPFDAYMSLLKVAGVYVLV 274 (299)
Q Consensus 250 d~~g~~~~~~~~~~~l~~~G~~v~~ 274 (299)
-+...........+.|+++|+++..
T Consensus 148 ~~~~~~~~~~~l~~~L~~gG~lvi~ 172 (205)
T PRK13944 148 VTAAASTIPSALVRQLKDGGVLVIP 172 (205)
T ss_pred EccCcchhhHHHHHhcCcCcEEEEE
Confidence 7766555567888999999998764
No 244
>PRK07831 short chain dehydrogenase; Provisional
Probab=96.65 E-value=0.022 Score=49.10 Aligned_cols=76 Identities=24% Similarity=0.290 Sum_probs=53.9
Q ss_pred CCCCEEEEEcC-C-hHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHh----cCCCEE--E--eCCCHHHHHHh-------
Q 022313 179 QPGKSLGVIGL-G-GLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL----LGADKF--V--VSSDLEQMKAL------- 241 (299)
Q Consensus 179 ~~g~~vlI~G~-g-~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~----~g~~~v--~--~~~~~~~~~~~------- 241 (299)
.++++++|.|+ | ++|...++.+...|++|+++++++++.+...++ ++...+ + |..+.+.+.++
T Consensus 15 ~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 94 (262)
T PRK07831 15 LAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVER 94 (262)
T ss_pred cCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence 56789999987 6 799999999999999999999887766554332 443222 2 44444433322
Q ss_pred cCCccEEEEcCCC
Q 022313 242 GKSLDFIIDTASG 254 (299)
Q Consensus 242 ~~~~d~v~d~~g~ 254 (299)
.+++|+++.+.|.
T Consensus 95 ~g~id~li~~ag~ 107 (262)
T PRK07831 95 LGRLDVLVNNAGL 107 (262)
T ss_pred cCCCCEEEECCCC
Confidence 2578999999984
No 245
>PRK05867 short chain dehydrogenase; Provisional
Probab=96.65 E-value=0.014 Score=50.12 Aligned_cols=75 Identities=17% Similarity=0.173 Sum_probs=54.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhc---CCC-E--EEeCCCHHHHHHh-------cCCc
Q 022313 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL---GAD-K--FVVSSDLEQMKAL-------GKSL 245 (299)
Q Consensus 180 ~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~-------~~~~ 245 (299)
+++++||.|+ |++|...++.+...|++|+++.++.++.+.+.+++ +.. . ..|..+.+.+.++ .+++
T Consensus 8 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 87 (253)
T PRK05867 8 HGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELGGI 87 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 5789999998 89999999999999999999999887776654443 321 1 1244444443332 2589
Q ss_pred cEEEEcCCC
Q 022313 246 DFIIDTASG 254 (299)
Q Consensus 246 d~v~d~~g~ 254 (299)
|+++.+.|.
T Consensus 88 d~lv~~ag~ 96 (253)
T PRK05867 88 DIAVCNAGI 96 (253)
T ss_pred CEEEECCCC
Confidence 999998873
No 246
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=96.64 E-value=0.016 Score=49.76 Aligned_cols=75 Identities=20% Similarity=0.214 Sum_probs=53.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhc---CCCE-E--EeCCCHHHHHHh-------cCCc
Q 022313 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL---GADK-F--VVSSDLEQMKAL-------GKSL 245 (299)
Q Consensus 180 ~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~---g~~~-v--~~~~~~~~~~~~-------~~~~ 245 (299)
+++++||.|+ |.+|...++.+...|++|+++++++++.+.+.+++ |... . .|..+.+.+.++ .+++
T Consensus 9 ~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 88 (255)
T PRK07523 9 TGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIGPI 88 (255)
T ss_pred CCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence 5789999998 99999999999989999999999887665543333 3211 1 244444444332 2578
Q ss_pred cEEEEcCCC
Q 022313 246 DFIIDTASG 254 (299)
Q Consensus 246 d~v~d~~g~ 254 (299)
|+++.+.|.
T Consensus 89 d~li~~ag~ 97 (255)
T PRK07523 89 DILVNNAGM 97 (255)
T ss_pred CEEEECCCC
Confidence 999999984
No 247
>PRK05854 short chain dehydrogenase; Provisional
Probab=96.64 E-value=0.013 Score=52.22 Aligned_cols=75 Identities=28% Similarity=0.356 Sum_probs=53.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhc----C-CC-EE--EeCCCHHHHHHh-------cC
Q 022313 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL----G-AD-KF--VVSSDLEQMKAL-------GK 243 (299)
Q Consensus 180 ~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~----g-~~-~v--~~~~~~~~~~~~-------~~ 243 (299)
++++++|.|+ +++|...++.+...|++|+++.|+.++.+.+.+++ + .. .+ .|..+.+.++++ .+
T Consensus 13 ~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~~~ 92 (313)
T PRK05854 13 SGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAEGR 92 (313)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHhCC
Confidence 5789999998 89999999999999999999999987766554333 2 11 11 244455444332 25
Q ss_pred CccEEEEcCCC
Q 022313 244 SLDFIIDTASG 254 (299)
Q Consensus 244 ~~d~v~d~~g~ 254 (299)
++|++++++|.
T Consensus 93 ~iD~li~nAG~ 103 (313)
T PRK05854 93 PIHLLINNAGV 103 (313)
T ss_pred CccEEEECCcc
Confidence 78999998873
No 248
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.64 E-value=0.044 Score=47.04 Aligned_cols=97 Identities=15% Similarity=0.104 Sum_probs=63.5
Q ss_pred CCCEEEEEcCC---hHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCC--EE--EeCCCHHHHHHh-------cCCc
Q 022313 180 PGKSLGVIGLG---GLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGAD--KF--VVSSDLEQMKAL-------GKSL 245 (299)
Q Consensus 180 ~g~~vlI~G~g---~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~--~v--~~~~~~~~~~~~-------~~~~ 245 (299)
.+++++|.|++ ++|.+.++.+...|++|+++.+++...+.+ +++... .. .|-.+.+.++++ .+.+
T Consensus 6 ~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~~~~~~~-~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 84 (252)
T PRK06079 6 SGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQNDRMKKSL-QKLVDEEDLLVECDVASDESIERAFATIKERVGKI 84 (252)
T ss_pred CCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCchHHHHHH-HhhccCceeEEeCCCCCHHHHHHHHHHHHHHhCCC
Confidence 57899999874 899999999999999999998874333333 343211 11 233344333322 2679
Q ss_pred cEEEEcCCCc-----------------------------hhHHHHHHhcccCcEEEEEcCC
Q 022313 246 DFIIDTASGD-----------------------------HPFDAYMSLLKVAGVYVLVGFP 277 (299)
Q Consensus 246 d~v~d~~g~~-----------------------------~~~~~~~~~l~~~G~~v~~g~~ 277 (299)
|+++++.|.. ...+.+++.++.+|+++.++..
T Consensus 85 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~ 145 (252)
T PRK06079 85 DGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYF 145 (252)
T ss_pred CEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEecc
Confidence 9999988731 0123445667778898888765
No 249
>PRK12828 short chain dehydrogenase; Provisional
Probab=96.63 E-value=0.014 Score=49.19 Aligned_cols=75 Identities=20% Similarity=0.266 Sum_probs=51.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhc---CCCEE-EeCCCHHHHHHh-------cCCccE
Q 022313 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL---GADKF-VVSSDLEQMKAL-------GKSLDF 247 (299)
Q Consensus 180 ~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~---g~~~v-~~~~~~~~~~~~-------~~~~d~ 247 (299)
+++++||.|+ |.+|..+++.+...|++|++++++.++.....+++ +.+.+ .|..+.+.+.++ .+++|+
T Consensus 6 ~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 85 (239)
T PRK12828 6 QGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQFGRLDA 85 (239)
T ss_pred CCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHhCCcCE
Confidence 4789999998 99999999999888999999999876644432222 22221 233444333221 257999
Q ss_pred EEEcCCC
Q 022313 248 IIDTASG 254 (299)
Q Consensus 248 v~d~~g~ 254 (299)
++.+.+.
T Consensus 86 vi~~ag~ 92 (239)
T PRK12828 86 LVNIAGA 92 (239)
T ss_pred EEECCcc
Confidence 9998874
No 250
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....
Probab=96.63 E-value=0.022 Score=45.41 Aligned_cols=96 Identities=17% Similarity=0.230 Sum_probs=63.5
Q ss_pred cccchhhHHHHHHhhhccCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEEeCCCHHH
Q 022313 159 APLLCAGITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQ 237 (299)
Q Consensus 159 a~~~~~~~ta~~al~~~~~~~~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~ 237 (299)
..+||...+.+..++....--.|++++|+|. ..+|.-...++...++.|++.......+++.
T Consensus 14 ~~~PcTp~aii~lL~~~~~~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T~~l~~~----------------- 76 (160)
T PF02882_consen 14 GFVPCTPLAIIELLEYYGIDLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKTKNLQEI----------------- 76 (160)
T ss_dssp SS--HHHHHHHHHHHHTT-STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTSSSHHHH-----------------
T ss_pred CCcCCCHHHHHHHHHhcCCCCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCCCcccce-----------------
Confidence 4567777777777776654478999999998 6899999999999999999987665444333
Q ss_pred HHHhcCCccEEEEcCCCchhHHHHHHhcccCcEEEEEcCC
Q 022313 238 MKALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP 277 (299)
Q Consensus 238 ~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~ 277 (299)
.+..|+|+-++|.+..+ -.+.++++..++++|..
T Consensus 77 ----~~~ADIVVsa~G~~~~i--~~~~ik~gavVIDvG~~ 110 (160)
T PF02882_consen 77 ----TRRADIVVSAVGKPNLI--KADWIKPGAVVIDVGIN 110 (160)
T ss_dssp ----HTTSSEEEE-SSSTT-B---GGGS-TTEEEEE--CE
T ss_pred ----eeeccEEeeeecccccc--ccccccCCcEEEecCCc
Confidence 25688999999887633 23578898888888866
No 251
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=96.63 E-value=0.034 Score=47.54 Aligned_cols=75 Identities=21% Similarity=0.188 Sum_probs=53.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhc---CCC-E--EEeCCCHHHHHHh-------cCCc
Q 022313 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL---GAD-K--FVVSSDLEQMKAL-------GKSL 245 (299)
Q Consensus 180 ~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~-------~~~~ 245 (299)
+++++||.|+ |.+|...++.+...|++|+++++++++.+.+.+++ +.. + ..|..+.+.+.++ .+++
T Consensus 3 ~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 82 (258)
T PRK12429 3 KGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGGV 82 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 4678999997 99999999998888999999999987766553333 322 1 1244444443332 2579
Q ss_pred cEEEEcCCC
Q 022313 246 DFIIDTASG 254 (299)
Q Consensus 246 d~v~d~~g~ 254 (299)
|+++.+++.
T Consensus 83 d~vi~~a~~ 91 (258)
T PRK12429 83 DILVNNAGI 91 (258)
T ss_pred CEEEECCCC
Confidence 999998873
No 252
>PRK06128 oxidoreductase; Provisional
Probab=96.63 E-value=0.058 Score=47.66 Aligned_cols=98 Identities=15% Similarity=0.144 Sum_probs=63.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCch--HHHHH---HHhcCCCEE---EeCCCHHHHHHh-------cC
Q 022313 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTS--KKEEA---LSLLGADKF---VVSSDLEQMKAL-------GK 243 (299)
Q Consensus 180 ~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~--~~~~~---~~~~g~~~v---~~~~~~~~~~~~-------~~ 243 (299)
+++++||.|+ |++|...+..+...|++|+++.++.+ ..+.. .++.+.... .|..+.+.+.++ .+
T Consensus 54 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 133 (300)
T PRK06128 54 QGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKELG 133 (300)
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHHhC
Confidence 5689999988 99999999999999999988776532 12222 233443221 234444433322 25
Q ss_pred CccEEEEcCCCc--------------------------hhHHHHHHhcccCcEEEEEcCC
Q 022313 244 SLDFIIDTASGD--------------------------HPFDAYMSLLKVAGVYVLVGFP 277 (299)
Q Consensus 244 ~~d~v~d~~g~~--------------------------~~~~~~~~~l~~~G~~v~~g~~ 277 (299)
++|+++.+.|.. ...+.+++.++.+|+++.++..
T Consensus 134 ~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~ 193 (300)
T PRK06128 134 GLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSI 193 (300)
T ss_pred CCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCc
Confidence 799999998831 1233445566778899988766
No 253
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=96.62 E-value=0.017 Score=48.06 Aligned_cols=96 Identities=18% Similarity=0.215 Sum_probs=57.4
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCch-------------------HHHHHH---HhcCC-CEEE--e-C
Q 022313 180 PGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTS-------------------KKEEAL---SLLGA-DKFV--V-S 232 (299)
Q Consensus 180 ~g~~vlI~G~g~~G~~a~~~a~~~g~-~v~~~~~~~~-------------------~~~~~~---~~~g~-~~v~--~-~ 232 (299)
...+|+|+|+|++|..+++.+...|. ++++++.+.- +.+.++ +++.. ..+- + .
T Consensus 20 ~~~~VlviG~GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~~~ 99 (202)
T TIGR02356 20 LNSHVLIIGAGGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTALKER 99 (202)
T ss_pred cCCCEEEECCCHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEEehhc
Confidence 45779999999999999999999998 8888886621 111111 22221 1111 1 1
Q ss_pred CCHHHHHHhcCCccEEEEcCCCchhHHHHHHhcccCcE-EEEEc
Q 022313 233 SDLEQMKALGKSLDFIIDTASGDHPFDAYMSLLKVAGV-YVLVG 275 (299)
Q Consensus 233 ~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~-~v~~g 275 (299)
-+.+.+.+.-+++|+|++|+.+........+.....++ ++..+
T Consensus 100 i~~~~~~~~~~~~D~Vi~~~d~~~~r~~l~~~~~~~~ip~i~~~ 143 (202)
T TIGR02356 100 VTAENLELLINNVDLVLDCTDNFATRYLINDACVALGTPLISAA 143 (202)
T ss_pred CCHHHHHHHHhCCCEEEECCCCHHHHHHHHHHHHHcCCCEEEEE
Confidence 12233444557899999999887633333344344443 44433
No 254
>PLN02366 spermidine synthase
Probab=96.62 E-value=0.028 Score=49.89 Aligned_cols=96 Identities=16% Similarity=0.200 Sum_probs=63.0
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCchHHHHHHHhcCC---------CEEEeCCCHHHHHHh-cCCccE
Q 022313 179 QPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGA---------DKFVVSSDLEQMKAL-GKSLDF 247 (299)
Q Consensus 179 ~~g~~vlI~G~g~~G~~a~~~a~~~g~-~v~~~~~~~~~~~~~~~~~g~---------~~v~~~~~~~~~~~~-~~~~d~ 247 (299)
.+.++||++|+|. |..+..++++-+. +|.+++.+++-.+.+++.++. -.++..+....+++. .+.||+
T Consensus 90 ~~pkrVLiIGgG~-G~~~rellk~~~v~~V~~VEiD~~Vi~~ar~~f~~~~~~~~dpRv~vi~~Da~~~l~~~~~~~yDv 168 (308)
T PLN02366 90 PNPKKVLVVGGGD-GGVLREIARHSSVEQIDICEIDKMVIDVSKKFFPDLAVGFDDPRVNLHIGDGVEFLKNAPEGTYDA 168 (308)
T ss_pred CCCCeEEEEcCCc-cHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhhhhhccccCCCceEEEEChHHHHHhhccCCCCCE
Confidence 5678999998865 5566677777654 788888887766666443431 122222223344444 467999
Q ss_pred EEEcCCCc----------hhHHHHHHhcccCcEEEEEc
Q 022313 248 IIDTASGD----------HPFDAYMSLLKVAGVYVLVG 275 (299)
Q Consensus 248 v~d~~g~~----------~~~~~~~~~l~~~G~~v~~g 275 (299)
|+-....+ ..++.+.++|+++|.++.-+
T Consensus 169 Ii~D~~dp~~~~~~L~t~ef~~~~~~~L~pgGvlv~q~ 206 (308)
T PLN02366 169 IIVDSSDPVGPAQELFEKPFFESVARALRPGGVVCTQA 206 (308)
T ss_pred EEEcCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEECc
Confidence 98754431 24778899999999997643
No 255
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=96.60 E-value=0.019 Score=53.01 Aligned_cols=75 Identities=20% Similarity=0.209 Sum_probs=54.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcC--CC-EEEeCCCHHHHHHhcCCccEEEEcCCC
Q 022313 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLG--AD-KFVVSSDLEQMKALGKSLDFIIDTASG 254 (299)
Q Consensus 180 ~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g--~~-~v~~~~~~~~~~~~~~~~d~v~d~~g~ 254 (299)
++++++|.|+ |++|.+.++.+...|++|+++++++++.+...+..+ .. ...|..+.+.+.+.-+++|+++.+.|.
T Consensus 177 ~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd~~~v~~~l~~IDiLInnAGi 255 (406)
T PRK07424 177 KGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEINGEDLPVKTLHWQVGQEAALAELLEKVDILIINHGI 255 (406)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCCHHHHHHHhCCCCEEEECCCc
Confidence 5789999998 999999999988899999999988766543322211 11 122455566666655789999998873
No 256
>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed
Probab=96.60 E-value=0.03 Score=46.03 Aligned_cols=96 Identities=20% Similarity=0.264 Sum_probs=61.8
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHC-CCeEEEEeCCchHHHHHH---HhcCCCE--EEeCCCHHHHHHhcCCccEEEE
Q 022313 177 MNQPGKSLGVIGLGGLGHMAVKFGKAF-GLNVTVLSTSTSKKEEAL---SLLGADK--FVVSSDLEQMKALGKSLDFIID 250 (299)
Q Consensus 177 ~~~~g~~vlI~G~g~~G~~a~~~a~~~-g~~v~~~~~~~~~~~~~~---~~~g~~~--v~~~~~~~~~~~~~~~~d~v~d 250 (299)
.++++.+||-+|+|. |..+..+++.. +++|+.++.+++..+.+. ++.+.+. ++.. +...... .+.||+|+-
T Consensus 42 ~l~~g~~VLDiGcGt-G~~al~la~~~~~~~V~giD~s~~~l~~A~~~~~~~~l~~i~~~~~-d~~~~~~-~~~fDlV~~ 118 (187)
T PRK00107 42 YLPGGERVLDVGSGA-GFPGIPLAIARPELKVTLVDSLGKKIAFLREVAAELGLKNVTVVHG-RAEEFGQ-EEKFDVVTS 118 (187)
T ss_pred hcCCCCeEEEEcCCC-CHHHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHcCCCCEEEEec-cHhhCCC-CCCccEEEE
Confidence 345688999998863 55555555544 569999999987665543 3445432 2222 2222222 457999997
Q ss_pred cCCCc--hhHHHHHHhcccCcEEEEEc
Q 022313 251 TASGD--HPFDAYMSLLKVAGVYVLVG 275 (299)
Q Consensus 251 ~~g~~--~~~~~~~~~l~~~G~~v~~g 275 (299)
..... ..++.+.+.|+++|+++.+-
T Consensus 119 ~~~~~~~~~l~~~~~~LkpGG~lv~~~ 145 (187)
T PRK00107 119 RAVASLSDLVELCLPLLKPGGRFLALK 145 (187)
T ss_pred ccccCHHHHHHHHHHhcCCCeEEEEEe
Confidence 54332 35778889999999999873
No 257
>PRK07814 short chain dehydrogenase; Provisional
Probab=96.60 E-value=0.017 Score=49.83 Aligned_cols=76 Identities=20% Similarity=0.232 Sum_probs=54.0
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhc---CCC-EE--EeCCCHHHHHHh-------cCC
Q 022313 179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL---GAD-KF--VVSSDLEQMKAL-------GKS 244 (299)
Q Consensus 179 ~~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~---g~~-~v--~~~~~~~~~~~~-------~~~ 244 (299)
-+++++||.|+ |++|...++.+...|++|+++++++++.+.+.+++ +.. ++ .+..+.+.+.++ .++
T Consensus 8 ~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 87 (263)
T PRK07814 8 LDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFGR 87 (263)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 35789999998 89999999999999999999999887766553332 321 22 244444443322 257
Q ss_pred ccEEEEcCCC
Q 022313 245 LDFIIDTASG 254 (299)
Q Consensus 245 ~d~v~d~~g~ 254 (299)
+|+++.++|.
T Consensus 88 id~vi~~Ag~ 97 (263)
T PRK07814 88 LDIVVNNVGG 97 (263)
T ss_pred CCEEEECCCC
Confidence 9999998873
No 258
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.60 E-value=0.026 Score=49.26 Aligned_cols=96 Identities=17% Similarity=0.160 Sum_probs=71.2
Q ss_pred cccchhhHHHHHHhhhccCCCCCCEEEEEcCC-hHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEEeCCCHHH
Q 022313 159 APLLCAGITVYTPMMRHKMNQPGKSLGVIGLG-GLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQ 237 (299)
Q Consensus 159 a~~~~~~~ta~~al~~~~~~~~g~~vlI~G~g-~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~ 237 (299)
..+||...+....++....--.|++|+|+|.| .+|.-.+.++...|+.|++.......+
T Consensus 135 ~~~PcTp~avi~lL~~~~i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~t~~l-------------------- 194 (285)
T PRK14191 135 GFVPATPMGVMRLLKHYHIEIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHILTKDL-------------------- 194 (285)
T ss_pred CCCCCcHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeCCcHHH--------------------
Confidence 34677777777777655443579999999985 999999999999999998875432222
Q ss_pred HHHhcCCccEEEEcCCCchhHHHHHHhcccCcEEEEEcCC
Q 022313 238 MKALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP 277 (299)
Q Consensus 238 ~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~ 277 (299)
.+..+..|+|+-++|.+..+. -+.++++..++++|..
T Consensus 195 -~~~~~~ADIvV~AvG~p~~i~--~~~vk~GavVIDvGi~ 231 (285)
T PRK14191 195 -SFYTQNADIVCVGVGKPDLIK--ASMVKKGAVVVDIGIN 231 (285)
T ss_pred -HHHHHhCCEEEEecCCCCcCC--HHHcCCCcEEEEeecc
Confidence 233366899999999877333 4577999999999964
No 259
>PRK05717 oxidoreductase; Validated
Probab=96.60 E-value=0.023 Score=48.80 Aligned_cols=76 Identities=22% Similarity=0.237 Sum_probs=54.1
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCC-EE--EeCCCHHHHHH----h---cCCccE
Q 022313 179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGAD-KF--VVSSDLEQMKA----L---GKSLDF 247 (299)
Q Consensus 179 ~~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~-~v--~~~~~~~~~~~----~---~~~~d~ 247 (299)
.++++++|.|+ |.+|...+..+...|++|++++++.++.+.+.++++.. .. .|..+.+.+.+ + .+++|+
T Consensus 8 ~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~ 87 (255)
T PRK05717 8 HNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQFGRLDA 87 (255)
T ss_pred cCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence 45789999987 99999999999999999999988877666654555532 12 23334433322 2 256899
Q ss_pred EEEcCCC
Q 022313 248 IIDTASG 254 (299)
Q Consensus 248 v~d~~g~ 254 (299)
++.+.|.
T Consensus 88 li~~ag~ 94 (255)
T PRK05717 88 LVCNAAI 94 (255)
T ss_pred EEECCCc
Confidence 9998884
No 260
>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional
Probab=96.58 E-value=0.04 Score=42.93 Aligned_cols=95 Identities=13% Similarity=0.048 Sum_probs=68.9
Q ss_pred ccchhhHHHHHHhhhccCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEEeCCCHHHH
Q 022313 160 PLLCAGITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQM 238 (299)
Q Consensus 160 ~~~~~~~ta~~al~~~~~~~~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 238 (299)
.++|...+....++....--.|++|.|+|. ..+|.-.+.++...|++|++..+....+++.
T Consensus 7 ~~p~t~~a~~~ll~~~~~~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~~l~~~------------------ 68 (140)
T cd05212 7 FVSPVAKAVKELLNKEGVRLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTIQLQSK------------------ 68 (140)
T ss_pred ccccHHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCcCHHHH------------------
Confidence 456666666666665544468999999997 7899999999999999999987654333322
Q ss_pred HHhcCCccEEEEcCCCchhHHHHHHhcccCcEEEEEcCC
Q 022313 239 KALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP 277 (299)
Q Consensus 239 ~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~ 277 (299)
.+..|+|+-++|.+..+. -+.++++-.++.+|..
T Consensus 69 ---v~~ADIVvsAtg~~~~i~--~~~ikpGa~Vidvg~~ 102 (140)
T cd05212 69 ---VHDADVVVVGSPKPEKVP--TEWIKPGATVINCSPT 102 (140)
T ss_pred ---HhhCCEEEEecCCCCccC--HHHcCCCCEEEEcCCC
Confidence 255788888888775333 4568888888887755
No 261
>PRK06949 short chain dehydrogenase; Provisional
Probab=96.57 E-value=0.023 Score=48.70 Aligned_cols=76 Identities=24% Similarity=0.317 Sum_probs=54.2
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhc---C-CCEEE--eCCCHHHHHHh-------cCC
Q 022313 179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL---G-ADKFV--VSSDLEQMKAL-------GKS 244 (299)
Q Consensus 179 ~~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~---g-~~~v~--~~~~~~~~~~~-------~~~ 244 (299)
.++++++|.|+ |.+|..++..+...|++|+++.+++++.+.+.+.+ + ...++ |..+.+.+.++ .++
T Consensus 7 ~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 86 (258)
T PRK06949 7 LEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAGT 86 (258)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence 45789999998 99999999999999999999999988776654332 2 11222 33344333332 257
Q ss_pred ccEEEEcCCC
Q 022313 245 LDFIIDTASG 254 (299)
Q Consensus 245 ~d~v~d~~g~ 254 (299)
+|+++.+.|.
T Consensus 87 ~d~li~~ag~ 96 (258)
T PRK06949 87 IDILVNNSGV 96 (258)
T ss_pred CCEEEECCCC
Confidence 8999999983
No 262
>PRK09291 short chain dehydrogenase; Provisional
Probab=96.57 E-value=0.017 Score=49.47 Aligned_cols=74 Identities=15% Similarity=0.094 Sum_probs=52.8
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHH---hcCCC-E--EEeCCCHHHHHHh-cCCccEEEEcC
Q 022313 181 GKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALS---LLGAD-K--FVVSSDLEQMKAL-GKSLDFIIDTA 252 (299)
Q Consensus 181 g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~---~~g~~-~--v~~~~~~~~~~~~-~~~~d~v~d~~ 252 (299)
++++||.|+ |.+|...++.+...|++|++++++++..+.+.+ ..+.. . ..|..+.+.+... ..++|++|.+.
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~id~vi~~a 81 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAEWDVDVLLNNA 81 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhcCCCCEEEECC
Confidence 457999998 999999999999999999999998766554422 22321 1 2245555555443 35899999998
Q ss_pred CC
Q 022313 253 SG 254 (299)
Q Consensus 253 g~ 254 (299)
|.
T Consensus 82 g~ 83 (257)
T PRK09291 82 GI 83 (257)
T ss_pred Cc
Confidence 73
No 263
>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.57 E-value=0.025 Score=49.38 Aligned_cols=95 Identities=17% Similarity=0.128 Sum_probs=72.4
Q ss_pred ccchhhHHHHHHhhhccCCCCCCEEEEEcCC-hHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEEeCCCHHHH
Q 022313 160 PLLCAGITVYTPMMRHKMNQPGKSLGVIGLG-GLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQM 238 (299)
Q Consensus 160 ~~~~~~~ta~~al~~~~~~~~g~~vlI~G~g-~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 238 (299)
..||...+.+..++....--.|++++|+|.| .+|.-.+.++...+++|++..+....+
T Consensus 138 ~~PcTp~av~~ll~~~~i~l~Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs~T~~l--------------------- 196 (285)
T PRK10792 138 LRPCTPRGIMTLLERYGIDTYGLNAVVVGASNIVGRPMSLELLLAGCTVTVCHRFTKNL--------------------- 196 (285)
T ss_pred CCCCCHHHHHHHHHHcCCCCCCCEEEEECCCcccHHHHHHHHHHCCCeEEEEECCCCCH---------------------
Confidence 4677777777777766543579999999985 699999999999999998886543222
Q ss_pred HHhcCCccEEEEcCCCchhHHHHHHhcccCcEEEEEcCC
Q 022313 239 KALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP 277 (299)
Q Consensus 239 ~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~ 277 (299)
++..+.+|+++.++|.+..+.. +.++++..++++|..
T Consensus 197 ~~~~~~ADIvi~avG~p~~v~~--~~vk~gavVIDvGin 233 (285)
T PRK10792 197 RHHVRNADLLVVAVGKPGFIPG--EWIKPGAIVIDVGIN 233 (285)
T ss_pred HHHHhhCCEEEEcCCCcccccH--HHcCCCcEEEEcccc
Confidence 2334678999999998874433 788999999999944
No 264
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.57 E-value=0.024 Score=48.33 Aligned_cols=74 Identities=24% Similarity=0.334 Sum_probs=52.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHh---cCCC-E--EEeCCCHHHHHHh-------cCCc
Q 022313 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL---LGAD-K--FVVSSDLEQMKAL-------GKSL 245 (299)
Q Consensus 180 ~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~---~g~~-~--v~~~~~~~~~~~~-------~~~~ 245 (299)
+++++||.|+ |++|...++.+...|++|++++++.++.+.+.++ .+.. . ..|..+.+.+.++ .+++
T Consensus 4 ~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 83 (253)
T PRK08217 4 KDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQL 83 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 5789999998 9999999999999999999999988766555333 2332 1 2233343333221 2578
Q ss_pred cEEEEcCC
Q 022313 246 DFIIDTAS 253 (299)
Q Consensus 246 d~v~d~~g 253 (299)
|.+|.+.|
T Consensus 84 d~vi~~ag 91 (253)
T PRK08217 84 NGLINNAG 91 (253)
T ss_pred CEEEECCC
Confidence 99999987
No 265
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=96.55 E-value=0.019 Score=46.36 Aligned_cols=98 Identities=20% Similarity=0.218 Sum_probs=67.3
Q ss_pred EEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEE--eCCCHHHHHHhcCCccEEEEcCCCch---
Q 022313 183 SLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFV--VSSDLEQMKALGKSLDFIIDTASGDH--- 256 (299)
Q Consensus 183 ~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~--~~~~~~~~~~~~~~~d~v~d~~g~~~--- 256 (299)
+|.|+|+ |-+|...++-|...|..|++++|++++.... +..- ++ +.-+.+.+.+.-.++|+||++.+...
T Consensus 2 KIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~-~~~~---i~q~Difd~~~~a~~l~g~DaVIsA~~~~~~~~ 77 (211)
T COG2910 2 KIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR-QGVT---ILQKDIFDLTSLASDLAGHDAVISAFGAGASDN 77 (211)
T ss_pred eEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc-ccce---eecccccChhhhHhhhcCCceEEEeccCCCCCh
Confidence 5789998 9999999999999999999999998887653 1111 11 11123344445589999999988641
Q ss_pred ------hHHHHHHhcccC--cEEEEEcCCCceeeCh
Q 022313 257 ------PFDAYMSLLKVA--GVYVLVGFPSKVKFSP 284 (299)
Q Consensus 257 ------~~~~~~~~l~~~--G~~v~~g~~~~~~~~~ 284 (299)
..+..+..|+.. -|++.+|.-++..+++
T Consensus 78 ~~~~~k~~~~li~~l~~agv~RllVVGGAGSL~id~ 113 (211)
T COG2910 78 DELHSKSIEALIEALKGAGVPRLLVVGGAGSLEIDE 113 (211)
T ss_pred hHHHHHHHHHHHHHHhhcCCeeEEEEcCccceEEcC
Confidence 234466777774 4788887664444333
No 266
>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase. Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.
Probab=96.55 E-value=0.025 Score=47.46 Aligned_cols=95 Identities=26% Similarity=0.295 Sum_probs=63.2
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHCCC--eEEEEeCCchHHHHHHH---hcCCCE--EEeCCCHHHHHHhcCCccEEEE
Q 022313 178 NQPGKSLGVIGLGGLGHMAVKFGKAFGL--NVTVLSTSTSKKEEALS---LLGADK--FVVSSDLEQMKALGKSLDFIID 250 (299)
Q Consensus 178 ~~~g~~vlI~G~g~~G~~a~~~a~~~g~--~v~~~~~~~~~~~~~~~---~~g~~~--v~~~~~~~~~~~~~~~~d~v~d 250 (299)
++++++||-+|+|. |..++.+++..+. +|+.++.+++..+.+++ +.|.+. ++..+..+.. .....||+|+-
T Consensus 75 ~~~~~~VLDiG~Gs-G~~a~~la~~~~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v~~~~~d~~~~~-~~~~~fD~Ii~ 152 (215)
T TIGR00080 75 LKPGMKVLEIGTGS-GYQAAVLAEIVGRDGLVVSIERIPELAEKAERRLRKLGLDNVIVIVGDGTQGW-EPLAPYDRIYV 152 (215)
T ss_pred CCCcCEEEEECCCc-cHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCeEEEECCcccCC-cccCCCCEEEE
Confidence 48999999999864 6677777776543 69999999887766543 334322 2222211111 11257999986
Q ss_pred cCCCchhHHHHHHhcccCcEEEEE
Q 022313 251 TASGDHPFDAYMSLLKVAGVYVLV 274 (299)
Q Consensus 251 ~~g~~~~~~~~~~~l~~~G~~v~~ 274 (299)
............+.|+++|+++..
T Consensus 153 ~~~~~~~~~~~~~~L~~gG~lv~~ 176 (215)
T TIGR00080 153 TAAGPKIPEALIDQLKEGGILVMP 176 (215)
T ss_pred cCCcccccHHHHHhcCcCcEEEEE
Confidence 655555577888999999998765
No 267
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.55 E-value=0.059 Score=46.46 Aligned_cols=98 Identities=12% Similarity=0.090 Sum_probs=64.5
Q ss_pred CCCEEEEEcC---ChHHHHHHHHHHHCCCeEEEEeCC---chHHHHHHHhcC-CC-EE--EeCCCHHHHHHh-------c
Q 022313 180 PGKSLGVIGL---GGLGHMAVKFGKAFGLNVTVLSTS---TSKKEEALSLLG-AD-KF--VVSSDLEQMKAL-------G 242 (299)
Q Consensus 180 ~g~~vlI~G~---g~~G~~a~~~a~~~g~~v~~~~~~---~~~~~~~~~~~g-~~-~v--~~~~~~~~~~~~-------~ 242 (299)
.+++++|.|+ +++|.+.++.+...|++|+++.++ .++.+++.+++. .. .. .|-.+.+.+.++ .
T Consensus 6 ~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 85 (257)
T PRK08594 6 EGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKEEV 85 (257)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHhC
Confidence 5788999986 599999999999999999998764 344555545542 11 11 244444443322 2
Q ss_pred CCccEEEEcCCCc-------h----------------------hHHHHHHhcccCcEEEEEcCC
Q 022313 243 KSLDFIIDTASGD-------H----------------------PFDAYMSLLKVAGVYVLVGFP 277 (299)
Q Consensus 243 ~~~d~v~d~~g~~-------~----------------------~~~~~~~~l~~~G~~v~~g~~ 277 (299)
+++|+++++.|.. . ..+.+++.++++|+++.++..
T Consensus 86 g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~ 149 (257)
T PRK08594 86 GVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYL 149 (257)
T ss_pred CCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEccc
Confidence 6799999987621 0 123445566778999988776
No 268
>PRK00811 spermidine synthase; Provisional
Probab=96.54 E-value=0.04 Score=48.42 Aligned_cols=95 Identities=20% Similarity=0.268 Sum_probs=63.9
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCchHHHHHHHhcCC-------C---EEEeCCCHHHHHHhcCCccE
Q 022313 179 QPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGA-------D---KFVVSSDLEQMKALGKSLDF 247 (299)
Q Consensus 179 ~~g~~vlI~G~g~~G~~a~~~a~~~g~-~v~~~~~~~~~~~~~~~~~g~-------~---~v~~~~~~~~~~~~~~~~d~ 247 (299)
.+.++||++|+|. |..+..++++.+. +|.+++.+++-.+.+++.+.. + +++..+....+....+.||+
T Consensus 75 ~~p~~VL~iG~G~-G~~~~~~l~~~~~~~V~~VEid~~vv~~a~~~~~~~~~~~~~d~rv~v~~~Da~~~l~~~~~~yDv 153 (283)
T PRK00811 75 PNPKRVLIIGGGD-GGTLREVLKHPSVEKITLVEIDERVVEVCRKYLPEIAGGAYDDPRVELVIGDGIKFVAETENSFDV 153 (283)
T ss_pred CCCCEEEEEecCc-hHHHHHHHcCCCCCEEEEEeCCHHHHHHHHHHhHHhccccccCCceEEEECchHHHHhhCCCcccE
Confidence 4567899998865 6666677776554 899999998887777544431 1 23333333444444578999
Q ss_pred EEEcCCCc----------hhHHHHHHhcccCcEEEEE
Q 022313 248 IIDTASGD----------HPFDAYMSLLKVAGVYVLV 274 (299)
Q Consensus 248 v~d~~g~~----------~~~~~~~~~l~~~G~~v~~ 274 (299)
|+-....+ ..++.+.+.|+++|.++..
T Consensus 154 Ii~D~~dp~~~~~~l~t~ef~~~~~~~L~~gGvlv~~ 190 (283)
T PRK00811 154 IIVDSTDPVGPAEGLFTKEFYENCKRALKEDGIFVAQ 190 (283)
T ss_pred EEECCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEEe
Confidence 98754322 2356788999999999875
No 269
>PRK06180 short chain dehydrogenase; Provisional
Probab=96.53 E-value=0.022 Score=49.69 Aligned_cols=75 Identities=17% Similarity=0.209 Sum_probs=54.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCC-EE--EeCCCHHHHHHh-------cCCccEE
Q 022313 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGAD-KF--VVSSDLEQMKAL-------GKSLDFI 248 (299)
Q Consensus 180 ~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~-~v--~~~~~~~~~~~~-------~~~~d~v 248 (299)
.++++||.|+ |++|...++.+...|++|+++++++++.+.+.+..+.. .. .+..+.+.+.++ .+++|++
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~v 82 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGPIDVL 82 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 3578999998 99999999999989999999999988877764443321 11 244444443332 2578999
Q ss_pred EEcCCC
Q 022313 249 IDTASG 254 (299)
Q Consensus 249 ~d~~g~ 254 (299)
+.+.|.
T Consensus 83 v~~ag~ 88 (277)
T PRK06180 83 VNNAGY 88 (277)
T ss_pred EECCCc
Confidence 999885
No 270
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.53 E-value=0.024 Score=49.46 Aligned_cols=95 Identities=18% Similarity=0.201 Sum_probs=71.4
Q ss_pred ccchhhHHHHHHhhhccCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEEeCCCHHHH
Q 022313 160 PLLCAGITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQM 238 (299)
Q Consensus 160 ~~~~~~~ta~~al~~~~~~~~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 238 (299)
.+||...+....++...---.|++|.|+|. +.+|.-.+.++...+++|++....... +
T Consensus 137 ~~PcTp~aii~lL~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~t~~---------------------l 195 (285)
T PRK14189 137 FRPCTPYGVMKMLESIGIPLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSKTRD---------------------L 195 (285)
T ss_pred CcCCCHHHHHHHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCCCCC---------------------H
Confidence 467776776666766554468999999998 566999999999999999886543222 2
Q ss_pred HHhcCCccEEEEcCCCchhHHHHHHhcccCcEEEEEcCC
Q 022313 239 KALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP 277 (299)
Q Consensus 239 ~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~ 277 (299)
.+..+..|+|+-++|.+..+.. ++++++..++++|..
T Consensus 196 ~~~~~~ADIVV~avG~~~~i~~--~~ik~gavVIDVGin 232 (285)
T PRK14189 196 AAHTRQADIVVAAVGKRNVLTA--DMVKPGATVIDVGMN 232 (285)
T ss_pred HHHhhhCCEEEEcCCCcCccCH--HHcCCCCEEEEcccc
Confidence 2333668999999998774443 889999999999966
No 271
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=96.51 E-value=0.0053 Score=45.23 Aligned_cols=89 Identities=19% Similarity=0.196 Sum_probs=60.5
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEEeCCCHHHHHHhcCCccEEEEcCCCchhH
Q 022313 179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHPF 258 (299)
Q Consensus 179 ~~g~~vlI~G~g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~v~d~~g~~~~~ 258 (299)
-++++|||+|+|.+|..-++.+...|++|+++.... +.. + +.-..... . .++.-.++|+|+-+++.+..-
T Consensus 5 l~~~~vlVvGgG~va~~k~~~Ll~~gA~v~vis~~~---~~~-~--~~i~~~~~-~---~~~~l~~~~lV~~at~d~~~n 74 (103)
T PF13241_consen 5 LKGKRVLVVGGGPVAARKARLLLEAGAKVTVISPEI---EFS-E--GLIQLIRR-E---FEEDLDGADLVFAATDDPELN 74 (103)
T ss_dssp -TT-EEEEEEESHHHHHHHHHHCCCTBEEEEEESSE---HHH-H--TSCEEEES-S----GGGCTTESEEEE-SS-HHHH
T ss_pred cCCCEEEEECCCHHHHHHHHHHHhCCCEEEEECCch---hhh-h--hHHHHHhh-h---HHHHHhhheEEEecCCCHHHH
Confidence 367899999999999999999999999999999886 222 1 21112211 1 112237799999999998855
Q ss_pred HHHHHhcccCcEEEEEcCC
Q 022313 259 DAYMSLLKVAGVYVLVGFP 277 (299)
Q Consensus 259 ~~~~~~l~~~G~~v~~g~~ 277 (299)
+...+..+..|..+.+...
T Consensus 75 ~~i~~~a~~~~i~vn~~D~ 93 (103)
T PF13241_consen 75 EAIYADARARGILVNVVDD 93 (103)
T ss_dssp HHHHHHHHHTTSEEEETT-
T ss_pred HHHHHHHhhCCEEEEECCC
Confidence 5666666778888877654
No 272
>PRK06484 short chain dehydrogenase; Validated
Probab=96.51 E-value=0.021 Score=54.56 Aligned_cols=76 Identities=24% Similarity=0.281 Sum_probs=57.8
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCE---EEeCCCHHHHHHh-------cCCccE
Q 022313 179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADK---FVVSSDLEQMKAL-------GKSLDF 247 (299)
Q Consensus 179 ~~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~---v~~~~~~~~~~~~-------~~~~d~ 247 (299)
.+++++||.|+ +++|...++.+...|++|++++++.++.+.+.++++... ..|..+.+.+.++ .+++|+
T Consensus 3 ~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~ 82 (520)
T PRK06484 3 AQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHREFGRIDV 82 (520)
T ss_pred CCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHHhCCCCE
Confidence 36789999998 899999999999999999999999888887767776432 2344454443332 267999
Q ss_pred EEEcCCC
Q 022313 248 IIDTASG 254 (299)
Q Consensus 248 v~d~~g~ 254 (299)
++++.|.
T Consensus 83 li~nag~ 89 (520)
T PRK06484 83 LVNNAGV 89 (520)
T ss_pred EEECCCc
Confidence 9999874
No 273
>PRK07478 short chain dehydrogenase; Provisional
Probab=96.51 E-value=0.019 Score=49.20 Aligned_cols=75 Identities=24% Similarity=0.277 Sum_probs=53.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhc---CCCE-EE--eCCCHHHHHHh-------cCCc
Q 022313 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL---GADK-FV--VSSDLEQMKAL-------GKSL 245 (299)
Q Consensus 180 ~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~---g~~~-v~--~~~~~~~~~~~-------~~~~ 245 (299)
++++++|.|+ |++|...++.+...|++|+++++++++.+.+.+++ +.+. .+ |..+.+.+.++ .+++
T Consensus 5 ~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (254)
T PRK07478 5 NGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFGGL 84 (254)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence 4678999998 89999999999999999999999988776654433 3222 22 33444333322 2579
Q ss_pred cEEEEcCCC
Q 022313 246 DFIIDTASG 254 (299)
Q Consensus 246 d~v~d~~g~ 254 (299)
|+++.++|.
T Consensus 85 d~li~~ag~ 93 (254)
T PRK07478 85 DIAFNNAGT 93 (254)
T ss_pred CEEEECCCC
Confidence 999999874
No 274
>PRK05876 short chain dehydrogenase; Provisional
Probab=96.50 E-value=0.02 Score=49.99 Aligned_cols=75 Identities=20% Similarity=0.181 Sum_probs=53.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhc---CCCE-E--EeCCCHHHHHHh-------cCCc
Q 022313 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL---GADK-F--VVSSDLEQMKAL-------GKSL 245 (299)
Q Consensus 180 ~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~---g~~~-v--~~~~~~~~~~~~-------~~~~ 245 (299)
+++++||.|+ |++|...+..+...|++|++++++.++.+++.+++ +... . .|..+.+.+.++ .+++
T Consensus 5 ~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 84 (275)
T PRK05876 5 PGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLGHV 84 (275)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence 4688999987 89999999999999999999999887766554443 3221 1 234444443332 2578
Q ss_pred cEEEEcCCC
Q 022313 246 DFIIDTASG 254 (299)
Q Consensus 246 d~v~d~~g~ 254 (299)
|+++++.|-
T Consensus 85 d~li~nAg~ 93 (275)
T PRK05876 85 DVVFSNAGI 93 (275)
T ss_pred CEEEECCCc
Confidence 999999883
No 275
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=96.50 E-value=0.013 Score=52.25 Aligned_cols=74 Identities=26% Similarity=0.355 Sum_probs=53.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCC---C-EE--EeCCCHHHHHHh-------cCCc
Q 022313 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGA---D-KF--VVSSDLEQMKAL-------GKSL 245 (299)
Q Consensus 180 ~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~---~-~v--~~~~~~~~~~~~-------~~~~ 245 (299)
++++++|.|+ |++|...++.+...|++|++++++.++.+.+.+++.. . .+ .|..+.+.+.++ .+++
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i 84 (322)
T PRK07453 5 AKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKPL 84 (322)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCCCc
Confidence 5788999988 9999999999888999999999998877666555531 1 12 244444443332 2469
Q ss_pred cEEEEcCC
Q 022313 246 DFIIDTAS 253 (299)
Q Consensus 246 d~v~d~~g 253 (299)
|++++++|
T Consensus 85 D~li~nAg 92 (322)
T PRK07453 85 DALVCNAA 92 (322)
T ss_pred cEEEECCc
Confidence 99999987
No 276
>PRK07890 short chain dehydrogenase; Provisional
Probab=96.50 E-value=0.017 Score=49.52 Aligned_cols=76 Identities=21% Similarity=0.244 Sum_probs=53.7
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhc---CCC---EEEeCCCHHHHHHh-------cCC
Q 022313 179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL---GAD---KFVVSSDLEQMKAL-------GKS 244 (299)
Q Consensus 179 ~~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~v~~~~~~~~~~~~-------~~~ 244 (299)
-+++++||.|+ |++|...++.+...|++|+++++++++.+.+.+++ +.. ...|..+.+.+..+ .++
T Consensus 3 l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 82 (258)
T PRK07890 3 LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFGR 82 (258)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcCC
Confidence 35788999998 89999999999999999999999887766654443 221 12244444433221 257
Q ss_pred ccEEEEcCCC
Q 022313 245 LDFIIDTASG 254 (299)
Q Consensus 245 ~d~v~d~~g~ 254 (299)
+|+++.+.|.
T Consensus 83 ~d~vi~~ag~ 92 (258)
T PRK07890 83 VDALVNNAFR 92 (258)
T ss_pred ccEEEECCcc
Confidence 8999998874
No 277
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=96.50 E-value=0.018 Score=51.91 Aligned_cols=76 Identities=22% Similarity=0.354 Sum_probs=51.2
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCch---------------------HH----HHHHHhcCCC-EE---
Q 022313 180 PGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTS---------------------KK----EEALSLLGAD-KF--- 229 (299)
Q Consensus 180 ~g~~vlI~G~g~~G~~a~~~a~~~g~-~v~~~~~~~~---------------------~~----~~~~~~~g~~-~v--- 229 (299)
...+|+|+|+|++|..++..+.+.|. ++++++.+.- +. +.+ +++..+ .+
T Consensus 23 ~~~~VlIiG~GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l-~~inp~v~i~~~ 101 (338)
T PRK12475 23 REKHVLIVGAGALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHL-RKINSEVEIVPV 101 (338)
T ss_pred cCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHH-HHHCCCcEEEEE
Confidence 44679999999999999999999998 7888877631 11 122 333321 11
Q ss_pred EeCCCHHHHHHhcCCccEEEEcCCCch
Q 022313 230 VVSSDLEQMKALGKSLDFIIDTASGDH 256 (299)
Q Consensus 230 ~~~~~~~~~~~~~~~~d~v~d~~g~~~ 256 (299)
...-+.+.+.++-.++|+|+|++.+..
T Consensus 102 ~~~~~~~~~~~~~~~~DlVid~~D~~~ 128 (338)
T PRK12475 102 VTDVTVEELEELVKEVDLIIDATDNFD 128 (338)
T ss_pred eccCCHHHHHHHhcCCCEEEEcCCCHH
Confidence 111223455566688999999998866
No 278
>PRK07024 short chain dehydrogenase; Provisional
Probab=96.49 E-value=0.03 Score=48.16 Aligned_cols=74 Identities=15% Similarity=0.126 Sum_probs=53.1
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCC---EE--EeCCCHHHHHHh-------cCCccE
Q 022313 181 GKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGAD---KF--VVSSDLEQMKAL-------GKSLDF 247 (299)
Q Consensus 181 g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~---~v--~~~~~~~~~~~~-------~~~~d~ 247 (299)
+++++|.|+ |++|...++.+...|++|+++++++++.+.+.+++... .. .|..+.+.+.+. .+.+|+
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~ 81 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLPDV 81 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence 468999987 99999999999999999999999988877665544321 11 244444444332 256899
Q ss_pred EEEcCCC
Q 022313 248 IIDTASG 254 (299)
Q Consensus 248 v~d~~g~ 254 (299)
++.+.|.
T Consensus 82 lv~~ag~ 88 (257)
T PRK07024 82 VIANAGI 88 (257)
T ss_pred EEECCCc
Confidence 9998873
No 279
>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.49 E-value=0.018 Score=50.37 Aligned_cols=76 Identities=24% Similarity=0.204 Sum_probs=56.1
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCC-EEE-------eCCCHHH----HHH---hc
Q 022313 179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGAD-KFV-------VSSDLEQ----MKA---LG 242 (299)
Q Consensus 179 ~~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~-~v~-------~~~~~~~----~~~---~~ 242 (299)
++...++|.|. .++|++.+..++..|+.|.++.|+.+++..++++++.. .+. |..+-+. +++ +.
T Consensus 31 k~~~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~ 110 (331)
T KOG1210|consen 31 KPRRHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLE 110 (331)
T ss_pred CccceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhcc
Confidence 55578889876 89999999999999999999999999999998777621 111 1111111 122 23
Q ss_pred CCccEEEEcCCC
Q 022313 243 KSLDFIIDTASG 254 (299)
Q Consensus 243 ~~~d~v~d~~g~ 254 (299)
..+|.+|.|.|.
T Consensus 111 ~~~d~l~~cAG~ 122 (331)
T KOG1210|consen 111 GPIDNLFCCAGV 122 (331)
T ss_pred CCcceEEEecCc
Confidence 689999999994
No 280
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=96.49 E-value=0.025 Score=47.88 Aligned_cols=82 Identities=21% Similarity=0.336 Sum_probs=63.7
Q ss_pred EEEEEcCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHH-hcCCCEE-EeCCCHHHHHHhc-CCccEEEEcCCCchhHH
Q 022313 183 SLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALS-LLGADKF-VVSSDLEQMKALG-KSLDFIIDTASGDHPFD 259 (299)
Q Consensus 183 ~vlI~G~g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~-~~g~~~v-~~~~~~~~~~~~~-~~~d~v~d~~g~~~~~~ 259 (299)
+++|+|+|.+|...++.+...|..|+++++++++.++... ++....+ .+..+.+.+.+++ ..+|+++-+++... .+
T Consensus 2 ~iiIiG~G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~~~~~~~v~gd~t~~~~L~~agi~~aD~vva~t~~d~-~N 80 (225)
T COG0569 2 KIIIIGAGRVGRSVARELSEEGHNVVLIDRDEERVEEFLADELDTHVVIGDATDEDVLEEAGIDDADAVVAATGNDE-VN 80 (225)
T ss_pred EEEEECCcHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhhhcceEEEEecCCCHHHHHhcCCCcCCEEEEeeCCCH-HH
Confidence 5889999999999999999999999999999999887433 3553333 3555677788875 88999999999866 44
Q ss_pred HHHHhc
Q 022313 260 AYMSLL 265 (299)
Q Consensus 260 ~~~~~l 265 (299)
..+-++
T Consensus 81 ~i~~~l 86 (225)
T COG0569 81 SVLALL 86 (225)
T ss_pred HHHHHH
Confidence 444433
No 281
>PRK06194 hypothetical protein; Provisional
Probab=96.49 E-value=0.015 Score=50.78 Aligned_cols=75 Identities=25% Similarity=0.381 Sum_probs=52.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhc---CCCE-EE--eCCCHHHHHHh-------cCCc
Q 022313 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL---GADK-FV--VSSDLEQMKAL-------GKSL 245 (299)
Q Consensus 180 ~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~---g~~~-v~--~~~~~~~~~~~-------~~~~ 245 (299)
+++++||.|+ |++|...++.+...|++|++++++.+..+...+++ +... ++ |..+.+.+.++ .+++
T Consensus 5 ~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~i 84 (287)
T PRK06194 5 AGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGAV 84 (287)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 4678999987 99999999999989999999999877665554433 3221 12 33344444332 2578
Q ss_pred cEEEEcCCC
Q 022313 246 DFIIDTASG 254 (299)
Q Consensus 246 d~v~d~~g~ 254 (299)
|+++.+.|.
T Consensus 85 d~vi~~Ag~ 93 (287)
T PRK06194 85 HLLFNNAGV 93 (287)
T ss_pred CEEEECCCC
Confidence 999999985
No 282
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=96.47 E-value=0.025 Score=40.78 Aligned_cols=86 Identities=20% Similarity=0.272 Sum_probs=59.8
Q ss_pred EEEEEcCChHHHHHHHHHHHCC---CeEEEE-eCCchHHHHHHHhcCCCEEEeCCCHHHHHHhcCCccEEEEcCCCchhH
Q 022313 183 SLGVIGLGGLGHMAVKFGKAFG---LNVTVL-STSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHPF 258 (299)
Q Consensus 183 ~vlI~G~g~~G~~a~~~a~~~g---~~v~~~-~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~v~d~~g~~~~~ 258 (299)
+|.|+|+|.+|.+.++-....| .+|+++ .+++++.+++.++++..... .+..+ ..+..|+||-++.... +
T Consensus 1 kI~iIG~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~~~~~~-~~~~~----~~~~advvilav~p~~-~ 74 (96)
T PF03807_consen 1 KIGIIGAGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYGVQATA-DDNEE----AAQEADVVILAVKPQQ-L 74 (96)
T ss_dssp EEEEESTSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCTTEEES-EEHHH----HHHHTSEEEE-S-GGG-H
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhcccccc-CChHH----hhccCCEEEEEECHHH-H
Confidence 4778899999999999999999 788855 99999999998888854332 11122 2236899999999877 5
Q ss_pred HHHHHhc---ccCcEEEEE
Q 022313 259 DAYMSLL---KVAGVYVLV 274 (299)
Q Consensus 259 ~~~~~~l---~~~G~~v~~ 274 (299)
...++.+ .++..++.+
T Consensus 75 ~~v~~~i~~~~~~~~vis~ 93 (96)
T PF03807_consen 75 PEVLSEIPHLLKGKLVISI 93 (96)
T ss_dssp HHHHHHHHHHHTTSEEEEE
T ss_pred HHHHHHHhhccCCCEEEEe
Confidence 5555443 444555544
No 283
>PRK01581 speE spermidine synthase; Validated
Probab=96.47 E-value=0.055 Score=48.86 Aligned_cols=96 Identities=19% Similarity=0.102 Sum_probs=63.4
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCC-CeEEEEeCCchHHHHHHHhcC-------------CCEEEeCCCHHHHHHhcCC
Q 022313 179 QPGKSLGVIGLGGLGHMAVKFGKAFG-LNVTVLSTSTSKKEEALSLLG-------------ADKFVVSSDLEQMKALGKS 244 (299)
Q Consensus 179 ~~g~~vlI~G~g~~G~~a~~~a~~~g-~~v~~~~~~~~~~~~~~~~~g-------------~~~v~~~~~~~~~~~~~~~ 244 (299)
...++|||+|+| .|.++..+++..+ .+|++++.+++-.+.++ ++. .-+++..+..+.+....+.
T Consensus 149 ~~PkrVLIIGgG-dG~tlrelLk~~~v~~It~VEIDpeVIelAr-~~~~L~~~~~~~~~DpRV~vvi~Da~~fL~~~~~~ 226 (374)
T PRK01581 149 IDPKRVLILGGG-DGLALREVLKYETVLHVDLVDLDGSMINMAR-NVPELVSLNKSAFFDNRVNVHVCDAKEFLSSPSSL 226 (374)
T ss_pred CCCCEEEEECCC-HHHHHHHHHhcCCCCeEEEEeCCHHHHHHHH-hccccchhccccCCCCceEEEECcHHHHHHhcCCC
Confidence 455799999976 4666677777654 48999999888777774 321 0112223323444555578
Q ss_pred ccEEEEcCCCc-----------hhHHHHHHhcccCcEEEEEcC
Q 022313 245 LDFIIDTASGD-----------HPFDAYMSLLKVAGVYVLVGF 276 (299)
Q Consensus 245 ~d~v~d~~g~~-----------~~~~~~~~~l~~~G~~v~~g~ 276 (299)
||+||-....+ ..++.+.+.|+++|.++.-..
T Consensus 227 YDVIIvDl~DP~~~~~~~LyT~EFy~~~~~~LkPgGV~V~Qs~ 269 (374)
T PRK01581 227 YDVIIIDFPDPATELLSTLYTSELFARIATFLTEDGAFVCQSN 269 (374)
T ss_pred ccEEEEcCCCccccchhhhhHHHHHHHHHHhcCCCcEEEEecC
Confidence 99998765432 246788899999999877643
No 284
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.47 E-value=0.028 Score=48.93 Aligned_cols=75 Identities=19% Similarity=0.209 Sum_probs=51.5
Q ss_pred CCCEEEEEcCC---hHHHHHHHHHHHCCCeEEEEeCCchH---HHHHHHhcCCCEEE--eCCCHHHHHHh-------cCC
Q 022313 180 PGKSLGVIGLG---GLGHMAVKFGKAFGLNVTVLSTSTSK---KEEALSLLGADKFV--VSSDLEQMKAL-------GKS 244 (299)
Q Consensus 180 ~g~~vlI~G~g---~~G~~a~~~a~~~g~~v~~~~~~~~~---~~~~~~~~g~~~v~--~~~~~~~~~~~-------~~~ 244 (299)
+++++||.|++ ++|.+.++.+...|++|+++.++++. .+.+.++.|....+ |-.+.+.+.++ .+.
T Consensus 6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 85 (271)
T PRK06505 6 QGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKKWGK 85 (271)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHhCC
Confidence 56889999984 89999999999999999998876532 23333344533222 44444444332 267
Q ss_pred ccEEEEcCCC
Q 022313 245 LDFIIDTASG 254 (299)
Q Consensus 245 ~d~v~d~~g~ 254 (299)
+|++++++|.
T Consensus 86 iD~lVnnAG~ 95 (271)
T PRK06505 86 LDFVVHAIGF 95 (271)
T ss_pred CCEEEECCcc
Confidence 9999999883
No 285
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=96.46 E-value=0.095 Score=39.08 Aligned_cols=90 Identities=19% Similarity=0.231 Sum_probs=63.6
Q ss_pred EEEEcCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEE-eCCCHHHHHHhc-CCccEEEEcCCCchh---H
Q 022313 184 LGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFV-VSSDLEQMKALG-KSLDFIIDTASGDHP---F 258 (299)
Q Consensus 184 vlI~G~g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~-~~~~~~~~~~~~-~~~d~v~d~~g~~~~---~ 258 (299)
|+|.|.|.+|...++.++..+.+|++++.+++..+.+ ++.|...+. +..+.+.+++.. ..+|.++-+++.... .
T Consensus 1 vvI~G~g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~-~~~~~~~i~gd~~~~~~l~~a~i~~a~~vv~~~~~d~~n~~~ 79 (116)
T PF02254_consen 1 VVIIGYGRIGREIAEQLKEGGIDVVVIDRDPERVEEL-REEGVEVIYGDATDPEVLERAGIEKADAVVILTDDDEENLLI 79 (116)
T ss_dssp EEEES-SHHHHHHHHHHHHTTSEEEEEESSHHHHHHH-HHTTSEEEES-TTSHHHHHHTTGGCESEEEEESSSHHHHHHH
T ss_pred eEEEcCCHHHHHHHHHHHhCCCEEEEEECCcHHHHHH-HhcccccccccchhhhHHhhcCccccCEEEEccCCHHHHHHH
Confidence 5788999999999999999666999999999998888 466643332 444566677665 789999988887552 2
Q ss_pred HHHHHhcccCcEEEEE
Q 022313 259 DAYMSLLKVAGVYVLV 274 (299)
Q Consensus 259 ~~~~~~l~~~G~~v~~ 274 (299)
...++.+.+..+++..
T Consensus 80 ~~~~r~~~~~~~ii~~ 95 (116)
T PF02254_consen 80 ALLARELNPDIRIIAR 95 (116)
T ss_dssp HHHHHHHTTTSEEEEE
T ss_pred HHHHHHHCCCCeEEEE
Confidence 2233445556666654
No 286
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.46 E-value=0.033 Score=49.03 Aligned_cols=95 Identities=17% Similarity=0.199 Sum_probs=72.2
Q ss_pred cccchhhHHHHHHhhhccCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEe-CCchHHHHHHHhcCCCEEEeCCCHH
Q 022313 159 APLLCAGITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLS-TSTSKKEEALSLLGADKFVVSSDLE 236 (299)
Q Consensus 159 a~~~~~~~ta~~al~~~~~~~~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~-~~~~~~~~~~~~~g~~~v~~~~~~~ 236 (299)
..+||...+.+..++....--.|++|.|+|. +.+|.-.+.++...|+.|++.. ++.+
T Consensus 136 ~~~PcTp~ai~~ll~~~~i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~~--------------------- 194 (296)
T PRK14188 136 ALVPCTPLGCMMLLRRVHGDLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTRD--------------------- 194 (296)
T ss_pred CCcCCCHHHHHHHHHHhCCCCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCCC---------------------
Confidence 3567777777766766544368999999995 8999999999999999999984 5431
Q ss_pred HHHHhcCCccEEEEcCCCchhHHHHHHhcccCcEEEEEcCC
Q 022313 237 QMKALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP 277 (299)
Q Consensus 237 ~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~ 277 (299)
+.+..+..|+|+-++|.+..+...+ ++++..++++|..
T Consensus 195 -l~e~~~~ADIVIsavg~~~~v~~~~--lk~GavVIDvGin 232 (296)
T PRK14188 195 -LPAVCRRADILVAAVGRPEMVKGDW--IKPGATVIDVGIN 232 (296)
T ss_pred -HHHHHhcCCEEEEecCChhhcchhe--ecCCCEEEEcCCc
Confidence 1233356899999999887565554 8999999999876
No 287
>PRK06101 short chain dehydrogenase; Provisional
Probab=96.45 E-value=0.084 Score=44.84 Aligned_cols=72 Identities=17% Similarity=0.031 Sum_probs=49.1
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCE--EEeCCCHHHHHHh----cCCccEEEEcCC
Q 022313 182 KSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADK--FVVSSDLEQMKAL----GKSLDFIIDTAS 253 (299)
Q Consensus 182 ~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~--v~~~~~~~~~~~~----~~~~d~v~d~~g 253 (299)
++++|.|+ |++|...+..+...|++|+++++++++.+++.++..... ..|-.+.+.+.++ ....|.++.+.|
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~~i~~ag 80 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQSANIFTLAFDVTDHPGTKAALSQLPFIPELWIFNAG 80 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCCCeEEEeeCCCHHHHHHHHHhcccCCCEEEEcCc
Confidence 56899987 999999888888889999999999888777643322112 2344455544433 234677776665
No 288
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.44 E-value=0.019 Score=49.96 Aligned_cols=75 Identities=20% Similarity=0.239 Sum_probs=53.9
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhc---C-C-CEEEeCCCHHHHHH-------hcCCc
Q 022313 179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL---G-A-DKFVVSSDLEQMKA-------LGKSL 245 (299)
Q Consensus 179 ~~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~---g-~-~~v~~~~~~~~~~~-------~~~~~ 245 (299)
-+|+.|||.|+ +++|.+.++-....|+++++.+.+++..++-.++. | + ....|-.+.+.+.+ -.+.+
T Consensus 36 v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e~G~V 115 (300)
T KOG1201|consen 36 VSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKEVGDV 115 (300)
T ss_pred ccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHhcCCc
Confidence 57899999988 69999888888888999999998877655543333 4 1 23445555444332 23789
Q ss_pred cEEEEcCC
Q 022313 246 DFIIDTAS 253 (299)
Q Consensus 246 d~v~d~~g 253 (299)
|++++++|
T Consensus 116 ~ILVNNAG 123 (300)
T KOG1201|consen 116 DILVNNAG 123 (300)
T ss_pred eEEEeccc
Confidence 99999999
No 289
>PRK13255 thiopurine S-methyltransferase; Reviewed
Probab=96.43 E-value=0.023 Score=47.94 Aligned_cols=94 Identities=17% Similarity=0.051 Sum_probs=61.1
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEE-----------------EeCCCHHHHHHh
Q 022313 179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKF-----------------VVSSDLEQMKAL 241 (299)
Q Consensus 179 ~~g~~vlI~G~g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v-----------------~~~~~~~~~~~~ 241 (299)
.++.+||+.|+|. |.-++-+|. .|++|++++.++...+.+.++.+.... ...+-.+...+.
T Consensus 36 ~~~~rvL~~gCG~-G~da~~LA~-~G~~V~avD~s~~Ai~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~D~~~l~~~~ 113 (218)
T PRK13255 36 PAGSRVLVPLCGK-SLDMLWLAE-QGHEVLGVELSELAVEQFFAENGLTPQTRQSGEFEHYQAGEITIYCGDFFALTAAD 113 (218)
T ss_pred CCCCeEEEeCCCC-hHhHHHHHh-CCCeEEEEccCHHHHHHHHHHcCCCccccccccccccccCceEEEECcccCCCccc
Confidence 5678999999874 777777775 699999999999988876555443211 000000000011
Q ss_pred cCCccEEEEcCCC--------chhHHHHHHhcccCcEEEEE
Q 022313 242 GKSLDFIIDTASG--------DHPFDAYMSLLKVAGVYVLV 274 (299)
Q Consensus 242 ~~~~d~v~d~~g~--------~~~~~~~~~~l~~~G~~v~~ 274 (299)
...||.|+|..-- ...+..+.+.|+++|+++.+
T Consensus 114 ~~~fd~v~D~~~~~~l~~~~R~~~~~~l~~lL~pgG~~~l~ 154 (218)
T PRK13255 114 LADVDAVYDRAALIALPEEMRERYVQQLAALLPAGCRGLLV 154 (218)
T ss_pred CCCeeEEEehHhHhhCCHHHHHHHHHHHHHHcCCCCeEEEE
Confidence 2468999986531 22477888999999875543
No 290
>PLN02253 xanthoxin dehydrogenase
Probab=96.43 E-value=0.024 Score=49.38 Aligned_cols=75 Identities=20% Similarity=0.232 Sum_probs=53.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCC---CEE--EeCCCHHHHHHh-------cCCcc
Q 022313 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGA---DKF--VVSSDLEQMKAL-------GKSLD 246 (299)
Q Consensus 180 ~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~---~~v--~~~~~~~~~~~~-------~~~~d 246 (299)
.++++||.|+ |++|...++.+...|++|++++++++..+.+.++++. ... .|..+.+.+.++ .+++|
T Consensus 17 ~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~id 96 (280)
T PLN02253 17 LGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFGTLD 96 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence 4688999987 8999999998888999999999887766655455432 112 244454444332 25799
Q ss_pred EEEEcCCC
Q 022313 247 FIIDTASG 254 (299)
Q Consensus 247 ~v~d~~g~ 254 (299)
+++.+.|.
T Consensus 97 ~li~~Ag~ 104 (280)
T PLN02253 97 IMVNNAGL 104 (280)
T ss_pred EEEECCCc
Confidence 99998874
No 291
>PRK07574 formate dehydrogenase; Provisional
Probab=96.41 E-value=0.029 Score=51.38 Aligned_cols=89 Identities=17% Similarity=0.206 Sum_probs=59.8
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEEeCCCHHHHHHhcCCccEEEEcCCCchhH-
Q 022313 180 PGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHPF- 258 (299)
Q Consensus 180 ~g~~vlI~G~g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~v~d~~g~~~~~- 258 (299)
.|++|.|+|.|.+|...++.++.+|.+|++++++....+.. +.++.... ..+.++....|+|+.++....-.
T Consensus 191 ~gktVGIvG~G~IG~~vA~~l~~fG~~V~~~dr~~~~~~~~-~~~g~~~~------~~l~ell~~aDvV~l~lPlt~~T~ 263 (385)
T PRK07574 191 EGMTVGIVGAGRIGLAVLRRLKPFDVKLHYTDRHRLPEEVE-QELGLTYH------VSFDSLVSVCDVVTIHCPLHPETE 263 (385)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEECCCCCchhhH-hhcCceec------CCHHHHhhcCCEEEEcCCCCHHHH
Confidence 56889999999999999999999999999999876333322 34443211 12334446678877777643211
Q ss_pred ----HHHHHhcccCcEEEEEc
Q 022313 259 ----DAYMSLLKVAGVYVLVG 275 (299)
Q Consensus 259 ----~~~~~~l~~~G~~v~~g 275 (299)
...+..|+++..+|.++
T Consensus 264 ~li~~~~l~~mk~ga~lIN~a 284 (385)
T PRK07574 264 HLFDADVLSRMKRGSYLVNTA 284 (385)
T ss_pred HHhCHHHHhcCCCCcEEEECC
Confidence 33566777777776665
No 292
>PLN03075 nicotianamine synthase; Provisional
Probab=96.39 E-value=0.042 Score=48.31 Aligned_cols=104 Identities=13% Similarity=0.146 Sum_probs=68.7
Q ss_pred HhhhccCCCCCCEEEEEcCChHHHHHHHHHHHC--CCeEEEEeCCchHHHHHHHhcCC----CEEE--eCCCHHHHHHhc
Q 022313 171 PMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAF--GLNVTVLSTSTSKKEEALSLLGA----DKFV--VSSDLEQMKALG 242 (299)
Q Consensus 171 al~~~~~~~~g~~vlI~G~g~~G~~a~~~a~~~--g~~v~~~~~~~~~~~~~~~~~g~----~~v~--~~~~~~~~~~~~ 242 (299)
.+..... .+.++|+-+|+|+.++.++.+++.. +.+++.++.+++..+.+++.+.. ..-+ ...+........
T Consensus 115 ~L~~~~~-~~p~~VldIGcGpgpltaiilaa~~~p~~~~~giD~d~~ai~~Ar~~~~~~~gL~~rV~F~~~Da~~~~~~l 193 (296)
T PLN03075 115 LLSQHVN-GVPTKVAFVGSGPLPLTSIVLAKHHLPTTSFHNFDIDPSANDVARRLVSSDPDLSKRMFFHTADVMDVTESL 193 (296)
T ss_pred HHHHhhc-CCCCEEEEECCCCcHHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHhhhccCccCCcEEEECchhhccccc
Confidence 3433433 4779999999999999998888755 34899999999888877554422 1111 111111111113
Q ss_pred CCccEEEEcC------CC-chhHHHHHHhcccCcEEEEEc
Q 022313 243 KSLDFIIDTA------SG-DHPFDAYMSLLKVAGVYVLVG 275 (299)
Q Consensus 243 ~~~d~v~d~~------g~-~~~~~~~~~~l~~~G~~v~~g 275 (299)
++||+||-.+ .. ...++...+.|++||.++.-.
T Consensus 194 ~~FDlVF~~ALi~~dk~~k~~vL~~l~~~LkPGG~Lvlr~ 233 (296)
T PLN03075 194 KEYDVVFLAALVGMDKEEKVKVIEHLGKHMAPGALLMLRS 233 (296)
T ss_pred CCcCEEEEecccccccccHHHHHHHHHHhcCCCcEEEEec
Confidence 6899998874 11 235788899999999988663
No 293
>PRK08589 short chain dehydrogenase; Validated
Probab=96.39 E-value=0.028 Score=48.90 Aligned_cols=74 Identities=22% Similarity=0.244 Sum_probs=51.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhc---CCC-E--EEeCCCHHHHHHh-------cCCc
Q 022313 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL---GAD-K--FVVSSDLEQMKAL-------GKSL 245 (299)
Q Consensus 180 ~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~-------~~~~ 245 (299)
+++++||.|+ +++|...++.+...|++|++++++ ++.+...+++ +.. . ..|..+.+.+.++ .+++
T Consensus 5 ~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i 83 (272)
T PRK08589 5 ENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGRV 83 (272)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence 5789999998 899999999998899999999998 5554443333 321 1 2244444433322 2578
Q ss_pred cEEEEcCCC
Q 022313 246 DFIIDTASG 254 (299)
Q Consensus 246 d~v~d~~g~ 254 (299)
|+++.+.|.
T Consensus 84 d~li~~Ag~ 92 (272)
T PRK08589 84 DVLFNNAGV 92 (272)
T ss_pred CEEEECCCC
Confidence 999999874
No 294
>TIGR00417 speE spermidine synthase. the SpeE subunit of spermidine synthase catalysesthe reaction (putrescine + S-adenosylmethioninamine = spermidine + 5'-methylthioadenosine) and is involved in polyamine biosynthesis and in the biosynthesis of spermidine from arganine. The region between residues 77 and 120 of the seed alignment is thought to be involved in binding to decarboxylated SAM.
Probab=96.39 E-value=0.057 Score=47.11 Aligned_cols=96 Identities=17% Similarity=0.225 Sum_probs=60.5
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCchHHHHHHHhcCC---------CEEEeCCCHHHHHHhcCCccEE
Q 022313 179 QPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGA---------DKFVVSSDLEQMKALGKSLDFI 248 (299)
Q Consensus 179 ~~g~~vlI~G~g~~G~~a~~~a~~~g~-~v~~~~~~~~~~~~~~~~~g~---------~~v~~~~~~~~~~~~~~~~d~v 248 (299)
+..++||++|+|. |..+..+++.... ++.+++.+++-.+.+.+.+.. -+++..+..+.++...+.||+|
T Consensus 71 ~~p~~VL~iG~G~-G~~~~~ll~~~~~~~v~~veid~~vi~~a~~~~~~~~~~~~~~~v~i~~~D~~~~l~~~~~~yDvI 149 (270)
T TIGR00417 71 PNPKHVLVIGGGD-GGVLREVLKHKSVEKATLVDIDEKVIELSKKFLPSLAGSYDDPRVDLQIDDGFKFLADTENTFDVI 149 (270)
T ss_pred CCCCEEEEEcCCc-hHHHHHHHhCCCcceEEEEeCCHHHHHHHHHHhHhhcccccCCceEEEECchHHHHHhCCCCccEE
Confidence 4456999998865 4455566665534 899999887776666443321 1222222233344445789999
Q ss_pred EEcCCC----------chhHHHHHHhcccCcEEEEEc
Q 022313 249 IDTASG----------DHPFDAYMSLLKVAGVYVLVG 275 (299)
Q Consensus 249 ~d~~g~----------~~~~~~~~~~l~~~G~~v~~g 275 (299)
+-.... ...++.+.+.|+++|.++...
T Consensus 150 i~D~~~~~~~~~~l~~~ef~~~~~~~L~pgG~lv~~~ 186 (270)
T TIGR00417 150 IVDSTDPVGPAETLFTKEFYELLKKALNEDGIFVAQS 186 (270)
T ss_pred EEeCCCCCCcccchhHHHHHHHHHHHhCCCcEEEEcC
Confidence 764431 123567889999999998763
No 295
>PRK08017 oxidoreductase; Provisional
Probab=96.38 E-value=0.035 Score=47.51 Aligned_cols=72 Identities=21% Similarity=0.172 Sum_probs=52.8
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEE-EeCCCHHHHHH----h----cCCccEEEEc
Q 022313 182 KSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKF-VVSSDLEQMKA----L----GKSLDFIIDT 251 (299)
Q Consensus 182 ~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~~----~----~~~~d~v~d~ 251 (299)
++++|.|+ |.+|...++.+...|++|++++++.++.+.+ ++.+.+.+ .|..+.+.+.. . .+++|.++.+
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ii~~ 81 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARM-NSLGFTGILLDLDDPESVERAADEVIALTDNRLYGLFNN 81 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHH-HhCCCeEEEeecCCHHHHHHHHHHHHHhcCCCCeEEEEC
Confidence 57999998 9999999999999999999999998887776 45665433 24444433222 1 2568898888
Q ss_pred CCC
Q 022313 252 ASG 254 (299)
Q Consensus 252 ~g~ 254 (299)
.|.
T Consensus 82 ag~ 84 (256)
T PRK08017 82 AGF 84 (256)
T ss_pred CCC
Confidence 773
No 296
>PRK05884 short chain dehydrogenase; Provisional
Probab=96.36 E-value=0.026 Score=47.59 Aligned_cols=71 Identities=21% Similarity=0.214 Sum_probs=52.3
Q ss_pred EEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEE-EeCCCHHHHHHh----cCCccEEEEcCC
Q 022313 183 SLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKF-VVSSDLEQMKAL----GKSLDFIIDTAS 253 (299)
Q Consensus 183 ~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~~~----~~~~d~v~d~~g 253 (299)
+++|.|+ |++|...++.+...|++|+++++++++.+.+.++.+...+ .|..+.+.+.++ .+.+|+++++.|
T Consensus 2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~id~lv~~ag 78 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKELDVDAIVCDNTDPASLEEARGLFPHHLDTIVNVPA 78 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCcEEecCCCCHHHHHHHHHHHhhcCcEEEECCC
Confidence 4889987 8999999999998999999999998887776556554332 244455444332 246899999865
No 297
>PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.35 E-value=0.04 Score=47.95 Aligned_cols=96 Identities=18% Similarity=0.180 Sum_probs=71.8
Q ss_pred cccchhhHHHHHHhhhccCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEEeCCCHHH
Q 022313 159 APLLCAGITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQ 237 (299)
Q Consensus 159 a~~~~~~~ta~~al~~~~~~~~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~ 237 (299)
..+||...+.+..++....--.|++|.|+|. ..+|.-.+.++...+++|++..+....++
T Consensus 130 ~~~PcTp~av~~ll~~~~i~l~Gk~V~ViGrs~~vGrpla~lL~~~~atVtv~hs~t~~L~------------------- 190 (279)
T PRK14178 130 GFAPCTPNGIMTLLHEYKISIAGKRAVVVGRSIDVGRPMAALLLNADATVTICHSKTENLK------------------- 190 (279)
T ss_pred CCCCCCHHHHHHHHHHcCCCCCCCEEEEECCCccccHHHHHHHHhCCCeeEEEecChhHHH-------------------
Confidence 3467777777777766654468999999998 48999999999999999988876543332
Q ss_pred HHHhcCCccEEEEcCCCchhHHHHHHhcccCcEEEEEcCC
Q 022313 238 MKALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP 277 (299)
Q Consensus 238 ~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~ 277 (299)
+..+.+|+++.++|.+..+.. +.++++..++++|..
T Consensus 191 --~~~~~ADIvI~Avgk~~lv~~--~~vk~GavVIDVgi~ 226 (279)
T PRK14178 191 --AELRQADILVSAAGKAGFITP--DMVKPGATVIDVGIN 226 (279)
T ss_pred --HHHhhCCEEEECCCcccccCH--HHcCCCcEEEEeecc
Confidence 333668999999986654433 347999999999865
No 298
>PRK07985 oxidoreductase; Provisional
Probab=96.34 E-value=0.11 Score=45.82 Aligned_cols=99 Identities=16% Similarity=0.092 Sum_probs=63.4
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCc--hHHHHHH---HhcCCCE-E--EeCCCHHHHHHh-------c
Q 022313 179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTST--SKKEEAL---SLLGADK-F--VVSSDLEQMKAL-------G 242 (299)
Q Consensus 179 ~~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~--~~~~~~~---~~~g~~~-v--~~~~~~~~~~~~-------~ 242 (299)
-+++++||.|+ |++|...++.+...|++|+++.++. +..+.+. ++.+... + .|..+.+.+.++ .
T Consensus 47 ~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 126 (294)
T PRK07985 47 LKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKAL 126 (294)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 35678999998 8999999999999999999877543 2233331 2334221 1 244444433222 2
Q ss_pred CCccEEEEcCCCc--------------------------hhHHHHHHhcccCcEEEEEcCC
Q 022313 243 KSLDFIIDTASGD--------------------------HPFDAYMSLLKVAGVYVLVGFP 277 (299)
Q Consensus 243 ~~~d~v~d~~g~~--------------------------~~~~~~~~~l~~~G~~v~~g~~ 277 (299)
+++|+++.+.|.. ...+.+++.++.+|+++.++..
T Consensus 127 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~ 187 (294)
T PRK07985 127 GGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSI 187 (294)
T ss_pred CCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCc
Confidence 6789999988731 1233455556678999988766
No 299
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=96.34 E-value=0.042 Score=47.13 Aligned_cols=75 Identities=17% Similarity=0.202 Sum_probs=54.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCC-EEE--eCCCHHHHHHh-------cCCccEE
Q 022313 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGAD-KFV--VSSDLEQMKAL-------GKSLDFI 248 (299)
Q Consensus 180 ~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~-~v~--~~~~~~~~~~~-------~~~~d~v 248 (299)
.++++||.|+ |++|...++.+...|++|++++++.++.+.+.++++.. ..+ |-.+.+.+.++ .+++|++
T Consensus 5 ~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l 84 (257)
T PRK07067 5 QGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDIL 84 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 4678999998 99999999999999999999999988877765555422 122 33343333222 2578999
Q ss_pred EEcCCC
Q 022313 249 IDTASG 254 (299)
Q Consensus 249 ~d~~g~ 254 (299)
+.+.|.
T Consensus 85 i~~ag~ 90 (257)
T PRK07067 85 FNNAAL 90 (257)
T ss_pred EECCCc
Confidence 998873
No 300
>PRK08177 short chain dehydrogenase; Provisional
Probab=96.33 E-value=0.03 Score=47.08 Aligned_cols=72 Identities=21% Similarity=0.225 Sum_probs=51.0
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEE--EeCCCHHHHHHh-----cCCccEEEEcCC
Q 022313 182 KSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKF--VVSSDLEQMKAL-----GKSLDFIIDTAS 253 (299)
Q Consensus 182 ~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v--~~~~~~~~~~~~-----~~~~d~v~d~~g 253 (299)
++++|.|+ |++|...+..+...|++|+++++++++.+.+ ++++...+ .|..+.+.++++ .+++|+++.+.|
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~-~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi~~ag 80 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTAL-QALPGVHIEKLDMNDPASLDQLLQRLQGQRFDLLFVNAG 80 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHH-HhccccceEEcCCCCHHHHHHHHHHhhcCCCCEEEEcCc
Confidence 46899997 9999999988888999999999998777665 34432222 244444444332 247999998876
Q ss_pred C
Q 022313 254 G 254 (299)
Q Consensus 254 ~ 254 (299)
.
T Consensus 81 ~ 81 (225)
T PRK08177 81 I 81 (225)
T ss_pred c
Confidence 3
No 301
>PRK09242 tropinone reductase; Provisional
Probab=96.33 E-value=0.029 Score=48.18 Aligned_cols=75 Identities=20% Similarity=0.262 Sum_probs=53.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhc-----CCCE-E--EeCCCHHHHHH----h---cC
Q 022313 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL-----GADK-F--VVSSDLEQMKA----L---GK 243 (299)
Q Consensus 180 ~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~-----g~~~-v--~~~~~~~~~~~----~---~~ 243 (299)
+++++||.|+ |++|...++.+...|++|++++++.+..+++.+++ +.+. . .|..+.+.+.+ + .+
T Consensus 8 ~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 87 (257)
T PRK09242 8 DGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHWD 87 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 5789999998 89999999999999999999999987766654333 2111 1 23334433322 1 26
Q ss_pred CccEEEEcCCC
Q 022313 244 SLDFIIDTASG 254 (299)
Q Consensus 244 ~~d~v~d~~g~ 254 (299)
++|+++.+.|.
T Consensus 88 ~id~li~~ag~ 98 (257)
T PRK09242 88 GLHILVNNAGG 98 (257)
T ss_pred CCCEEEECCCC
Confidence 79999999984
No 302
>PRK06940 short chain dehydrogenase; Provisional
Probab=96.33 E-value=0.062 Score=46.85 Aligned_cols=96 Identities=24% Similarity=0.268 Sum_probs=62.1
Q ss_pred CCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhc---CCC-EE--EeCCCHHHHHHh------cCCccEE
Q 022313 181 GKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL---GAD-KF--VVSSDLEQMKAL------GKSLDFI 248 (299)
Q Consensus 181 g~~vlI~G~g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~---g~~-~v--~~~~~~~~~~~~------~~~~d~v 248 (299)
+++++|.|+|++|...+..+. .|++|+++++++++.+.+.+++ +.+ .+ .|..+.+.+..+ .+++|++
T Consensus 2 ~k~~lItGa~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id~l 80 (275)
T PRK06940 2 KEVVVVIGAGGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPVTGL 80 (275)
T ss_pred CCEEEEECCChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCCCEE
Confidence 357888899999999998885 7999999999877665543333 322 12 244444333222 2579999
Q ss_pred EEcCCCch------------------hHHHHHHhcccCcEEEEEcCC
Q 022313 249 IDTASGDH------------------PFDAYMSLLKVAGVYVLVGFP 277 (299)
Q Consensus 249 ~d~~g~~~------------------~~~~~~~~l~~~G~~v~~g~~ 277 (299)
+.++|... ..+.+.+.++.+|+++.+...
T Consensus 81 i~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~ 127 (275)
T PRK06940 81 VHTAGVSPSQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQ 127 (275)
T ss_pred EECCCcCCchhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEec
Confidence 99998421 133444556667777777655
No 303
>PRK06841 short chain dehydrogenase; Provisional
Probab=96.32 E-value=0.036 Score=47.41 Aligned_cols=74 Identities=27% Similarity=0.276 Sum_probs=51.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCE--E--EeCCCHHHHHHh-------cCCccE
Q 022313 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADK--F--VVSSDLEQMKAL-------GKSLDF 247 (299)
Q Consensus 180 ~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~--v--~~~~~~~~~~~~-------~~~~d~ 247 (299)
+++++||.|+ |.+|...++.+...|++|+++.++++..+.. ++..... . .|..+.+.+.++ .+++|+
T Consensus 14 ~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~~~~-~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~ 92 (255)
T PRK06841 14 SGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVA-AQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGRIDI 92 (255)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHhhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 5789999998 9999999999998999999999987654433 3332111 2 244444433322 257899
Q ss_pred EEEcCCC
Q 022313 248 IIDTASG 254 (299)
Q Consensus 248 v~d~~g~ 254 (299)
++.+.|.
T Consensus 93 vi~~ag~ 99 (255)
T PRK06841 93 LVNSAGV 99 (255)
T ss_pred EEECCCC
Confidence 9999984
No 304
>PRK07677 short chain dehydrogenase; Provisional
Probab=96.31 E-value=0.028 Score=48.11 Aligned_cols=74 Identities=24% Similarity=0.235 Sum_probs=52.3
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhc---CC-CEEE--eCCCHHHHHHh-------cCCcc
Q 022313 181 GKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL---GA-DKFV--VSSDLEQMKAL-------GKSLD 246 (299)
Q Consensus 181 g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~---g~-~~v~--~~~~~~~~~~~-------~~~~d 246 (299)
+++++|.|+ |++|...++.+...|++|+++++++++.+.+.+++ +. ..++ |..+.+.+.++ .+++|
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRID 80 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCcc
Confidence 468999988 89999999999999999999999887766553333 21 1222 33444443332 25789
Q ss_pred EEEEcCCC
Q 022313 247 FIIDTASG 254 (299)
Q Consensus 247 ~v~d~~g~ 254 (299)
+++.+.|.
T Consensus 81 ~lI~~ag~ 88 (252)
T PRK07677 81 ALINNAAG 88 (252)
T ss_pred EEEECCCC
Confidence 99999873
No 305
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=96.30 E-value=0.1 Score=44.73 Aligned_cols=74 Identities=22% Similarity=0.245 Sum_probs=49.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHh---cCCCE---EEeCCCHHHHHHh-------cCCc
Q 022313 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL---LGADK---FVVSSDLEQMKAL-------GKSL 245 (299)
Q Consensus 180 ~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~---~g~~~---v~~~~~~~~~~~~-------~~~~ 245 (299)
+++++||.|+ |++|...++.+...|++|+++++++.. ..+.++ .+.+. ..|..+.+.+.++ .+++
T Consensus 7 ~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 85 (260)
T PRK12823 7 AGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSELV-HEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAFGRI 85 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchHH-HHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcCCC
Confidence 4688999988 899999999999999999999987532 222222 23221 2244444333221 2579
Q ss_pred cEEEEcCCC
Q 022313 246 DFIIDTASG 254 (299)
Q Consensus 246 d~v~d~~g~ 254 (299)
|+++.++|.
T Consensus 86 d~lv~nAg~ 94 (260)
T PRK12823 86 DVLINNVGG 94 (260)
T ss_pred eEEEECCcc
Confidence 999999873
No 306
>PRK06483 dihydromonapterin reductase; Provisional
Probab=96.30 E-value=0.045 Score=46.30 Aligned_cols=74 Identities=23% Similarity=0.124 Sum_probs=50.6
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEE-EeCCCHHHHHH----h---cCCccEEEEc
Q 022313 181 GKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKF-VVSSDLEQMKA----L---GKSLDFIIDT 251 (299)
Q Consensus 181 g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~~----~---~~~~d~v~d~ 251 (299)
++++||.|+ +++|...++.+...|++|++++++++......++.+...+ .|..+.+.+.+ + .+++|+++.+
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ 81 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLRQAGAQCIQADFSTNAGIMAFIDELKQHTDGLRAIIHN 81 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCEEEEcCCCCHHHHHHHHHHHHhhCCCccEEEEC
Confidence 468999998 8999999999999999999999887654333344553221 23333333322 1 2569999999
Q ss_pred CCC
Q 022313 252 ASG 254 (299)
Q Consensus 252 ~g~ 254 (299)
.|.
T Consensus 82 ag~ 84 (236)
T PRK06483 82 ASD 84 (236)
T ss_pred Ccc
Confidence 874
No 307
>PRK08862 short chain dehydrogenase; Provisional
Probab=96.28 E-value=0.032 Score=47.23 Aligned_cols=74 Identities=11% Similarity=0.106 Sum_probs=53.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHh---cCCCE-E--EeCCCHHHHHHh-------cC-C
Q 022313 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL---LGADK-F--VVSSDLEQMKAL-------GK-S 244 (299)
Q Consensus 180 ~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~---~g~~~-v--~~~~~~~~~~~~-------~~-~ 244 (299)
++++++|.|+ +++|...+..+...|++|+++.+++++.+.+.++ .+.+. . .+..+.+.++++ -+ .
T Consensus 4 ~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~ 83 (227)
T PRK08862 4 KSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNRA 83 (227)
T ss_pred CCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 5688999998 7999999999999999999999998877665433 34221 1 233444444322 14 7
Q ss_pred ccEEEEcCC
Q 022313 245 LDFIIDTAS 253 (299)
Q Consensus 245 ~d~v~d~~g 253 (299)
+|+++.+.|
T Consensus 84 iD~li~nag 92 (227)
T PRK08862 84 PDVLVNNWT 92 (227)
T ss_pred CCEEEECCc
Confidence 999999986
No 308
>PRK06125 short chain dehydrogenase; Provisional
Probab=96.27 E-value=0.029 Score=48.28 Aligned_cols=75 Identities=23% Similarity=0.321 Sum_probs=53.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhc----CCC-EE--EeCCCHHHHHHh---cCCccEE
Q 022313 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL----GAD-KF--VVSSDLEQMKAL---GKSLDFI 248 (299)
Q Consensus 180 ~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~----g~~-~v--~~~~~~~~~~~~---~~~~d~v 248 (299)
++++++|.|+ +++|...++.+...|++|+++++++++.+.+.+++ +.. .. .|..+.+.+.++ .+.+|++
T Consensus 6 ~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id~l 85 (259)
T PRK06125 6 AGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEAGDIDIL 85 (259)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHhCCCCEE
Confidence 4789999998 89999999999889999999999887766653333 221 22 233444444332 2679999
Q ss_pred EEcCCC
Q 022313 249 IDTASG 254 (299)
Q Consensus 249 ~d~~g~ 254 (299)
+.+.|.
T Consensus 86 v~~ag~ 91 (259)
T PRK06125 86 VNNAGA 91 (259)
T ss_pred EECCCC
Confidence 998873
No 309
>PRK07774 short chain dehydrogenase; Provisional
Probab=96.25 E-value=0.035 Score=47.29 Aligned_cols=75 Identities=24% Similarity=0.279 Sum_probs=52.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhc---CCC-E--EEeCCCHHHHHHh-------cCCc
Q 022313 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL---GAD-K--FVVSSDLEQMKAL-------GKSL 245 (299)
Q Consensus 180 ~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~-------~~~~ 245 (299)
.+++++|.|+ |.+|...++.+...|++|++++++++..+.+.+++ +.. . ..|..+.+.+.++ .+++
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 84 (250)
T PRK07774 5 DDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFGGI 84 (250)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence 5678999998 99999999999989999999999876655443332 211 1 2244444433222 2578
Q ss_pred cEEEEcCCC
Q 022313 246 DFIIDTASG 254 (299)
Q Consensus 246 d~v~d~~g~ 254 (299)
|++|.++|.
T Consensus 85 d~vi~~ag~ 93 (250)
T PRK07774 85 DYLVNNAAI 93 (250)
T ss_pred CEEEECCCC
Confidence 999999883
No 310
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.24 E-value=0.045 Score=47.16 Aligned_cols=98 Identities=18% Similarity=0.207 Sum_probs=64.8
Q ss_pred CCCEEEEEcCC---hHHHHHHHHHHHCCCeEEEEeCCchH---HHHHHHhcCCCEEE--eCCCHHHHHHh-------cCC
Q 022313 180 PGKSLGVIGLG---GLGHMAVKFGKAFGLNVTVLSTSTSK---KEEALSLLGADKFV--VSSDLEQMKAL-------GKS 244 (299)
Q Consensus 180 ~g~~vlI~G~g---~~G~~a~~~a~~~g~~v~~~~~~~~~---~~~~~~~~g~~~v~--~~~~~~~~~~~-------~~~ 244 (299)
+++++||.|++ ++|.+.++.+...|++|++++++++. .+++.++++....+ |-.+.+.+.++ .+.
T Consensus 9 ~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 88 (258)
T PRK07533 9 AGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEEWGR 88 (258)
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHHcCC
Confidence 57899999863 89999999999999999999887543 34443444432222 33344433322 257
Q ss_pred ccEEEEcCCCch-----------------------------hHHHHHHhcccCcEEEEEcCC
Q 022313 245 LDFIIDTASGDH-----------------------------PFDAYMSLLKVAGVYVLVGFP 277 (299)
Q Consensus 245 ~d~v~d~~g~~~-----------------------------~~~~~~~~l~~~G~~v~~g~~ 277 (299)
+|+++++.|... ..+.++..++.+|+++.++..
T Consensus 89 ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~ 150 (258)
T PRK07533 89 LDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYY 150 (258)
T ss_pred CCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEecc
Confidence 899999987310 124455667777888887655
No 311
>PRK08643 acetoin reductase; Validated
Probab=96.24 E-value=0.031 Score=47.87 Aligned_cols=74 Identities=23% Similarity=0.230 Sum_probs=52.1
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhc---CCCE-E--EeCCCHHHHHHh-------cCCcc
Q 022313 181 GKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL---GADK-F--VVSSDLEQMKAL-------GKSLD 246 (299)
Q Consensus 181 g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~---g~~~-v--~~~~~~~~~~~~-------~~~~d 246 (299)
++++||.|+ |++|...++.+...|++|+++++++++.+.+.+++ +... . .|..+.+.+.++ .+++|
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 81 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLN 81 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 568999988 89999999999999999999999887766554333 2221 1 234444433322 25799
Q ss_pred EEEEcCCC
Q 022313 247 FIIDTASG 254 (299)
Q Consensus 247 ~v~d~~g~ 254 (299)
+++.+.|.
T Consensus 82 ~vi~~ag~ 89 (256)
T PRK08643 82 VVVNNAGV 89 (256)
T ss_pred EEEECCCC
Confidence 99999874
No 312
>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=96.23 E-value=0.028 Score=50.46 Aligned_cols=91 Identities=15% Similarity=0.164 Sum_probs=66.0
Q ss_pred CEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhc-------CCC---EEEeCCCHHHHHHhcCCccEEEEc
Q 022313 182 KSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL-------GAD---KFVVSSDLEQMKALGKSLDFIIDT 251 (299)
Q Consensus 182 ~~vlI~G~g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~-------g~~---~v~~~~~~~~~~~~~~~~d~v~d~ 251 (299)
-+|.|+|+|.+|.+.+..+...|.+|.++.+++++.+.+.+.. |.. .+....+ ..+..+..|+|+.+
T Consensus 5 m~I~iIG~G~mG~~ia~~L~~~G~~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~---~~e~~~~aD~Vi~~ 81 (328)
T PRK14618 5 MRVAVLGAGAWGTALAVLAASKGVPVRLWARRPEFAAALAAERENREYLPGVALPAELYPTAD---PEEALAGADFAVVA 81 (328)
T ss_pred CeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCeEEeCC---HHHHHcCCCEEEEE
Confidence 4699999999999999999988999999999888777664221 210 0111112 22334678999999
Q ss_pred CCCchhHHHHHHhcccCcEEEEEcC
Q 022313 252 ASGDHPFDAYMSLLKVAGVYVLVGF 276 (299)
Q Consensus 252 ~g~~~~~~~~~~~l~~~G~~v~~g~ 276 (299)
+.... .+.+++.++++-.++.+..
T Consensus 82 v~~~~-~~~v~~~l~~~~~vi~~~~ 105 (328)
T PRK14618 82 VPSKA-LRETLAGLPRALGYVSCAK 105 (328)
T ss_pred CchHH-HHHHHHhcCcCCEEEEEee
Confidence 99987 7888888888877776644
No 313
>PRK06138 short chain dehydrogenase; Provisional
Probab=96.23 E-value=0.024 Score=48.38 Aligned_cols=75 Identities=23% Similarity=0.260 Sum_probs=53.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhc--CCC-EEE--eCCCHHHHHHh-------cCCcc
Q 022313 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL--GAD-KFV--VSSDLEQMKAL-------GKSLD 246 (299)
Q Consensus 180 ~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~--g~~-~v~--~~~~~~~~~~~-------~~~~d 246 (299)
++++++|.|+ |.+|...++.+...|++|+++.++.+..+...+++ +.. .++ |..+.+.+.++ .+++|
T Consensus 4 ~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id 83 (252)
T PRK06138 4 AGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGRLD 83 (252)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 4678999988 99999999988888999999999987766554443 221 222 44444444332 25899
Q ss_pred EEEEcCCC
Q 022313 247 FIIDTASG 254 (299)
Q Consensus 247 ~v~d~~g~ 254 (299)
+++.+.|.
T Consensus 84 ~vi~~ag~ 91 (252)
T PRK06138 84 VLVNNAGF 91 (252)
T ss_pred EEEECCCC
Confidence 99999884
No 314
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=96.22 E-value=0.027 Score=44.86 Aligned_cols=84 Identities=17% Similarity=0.041 Sum_probs=54.7
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEEeCCCHHHHHHhcCCccEEEEcCCCchhH
Q 022313 179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHPF 258 (299)
Q Consensus 179 ~~g~~vlI~G~g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~v~d~~g~~~~~ 258 (299)
-.|++|+|+|+|.+|..-++.+...|++|++++ ++..+++ ++++.-... .+..+ ..--.++|+|+-+++... .
T Consensus 11 l~~~~vlVvGGG~va~rka~~Ll~~ga~V~VIs--p~~~~~l-~~l~~i~~~-~~~~~--~~dl~~a~lViaaT~d~e-~ 83 (157)
T PRK06719 11 LHNKVVVIIGGGKIAYRKASGLKDTGAFVTVVS--PEICKEM-KELPYITWK-QKTFS--NDDIKDAHLIYAATNQHA-V 83 (157)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEc--CccCHHH-HhccCcEEE-ecccC--hhcCCCceEEEECCCCHH-H
Confidence 467899999999999999998888999999885 3344444 244422221 11100 111267899999999887 5
Q ss_pred HHHHHhcccCc
Q 022313 259 DAYMSLLKVAG 269 (299)
Q Consensus 259 ~~~~~~l~~~G 269 (299)
+..+...+..+
T Consensus 84 N~~i~~~a~~~ 94 (157)
T PRK06719 84 NMMVKQAAHDF 94 (157)
T ss_pred HHHHHHHHHHC
Confidence 55554444333
No 315
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.21 E-value=0.048 Score=47.51 Aligned_cols=99 Identities=17% Similarity=0.164 Sum_probs=64.8
Q ss_pred CCCCEEEEEcC---ChHHHHHHHHHHHCCCeEEEEeCCc---hHHHHHHHhcCCCEE--EeCCCHHHHHHh-------cC
Q 022313 179 QPGKSLGVIGL---GGLGHMAVKFGKAFGLNVTVLSTST---SKKEEALSLLGADKF--VVSSDLEQMKAL-------GK 243 (299)
Q Consensus 179 ~~g~~vlI~G~---g~~G~~a~~~a~~~g~~v~~~~~~~---~~~~~~~~~~g~~~v--~~~~~~~~~~~~-------~~ 243 (299)
-.++++||.|+ +++|++.++.+...|++|+++.+++ ++.+++.++++.... .|-.+.+.++++ .+
T Consensus 8 ~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 87 (272)
T PRK08159 8 MAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKKWG 87 (272)
T ss_pred ccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHhcC
Confidence 45688999986 5899999999999999999887763 344445455553222 244444443332 25
Q ss_pred CccEEEEcCCCc-----------------------------hhHHHHHHhcccCcEEEEEcCC
Q 022313 244 SLDFIIDTASGD-----------------------------HPFDAYMSLLKVAGVYVLVGFP 277 (299)
Q Consensus 244 ~~d~v~d~~g~~-----------------------------~~~~~~~~~l~~~G~~v~~g~~ 277 (299)
++|+++++.|.. ...+.+++.++.+|+++.++..
T Consensus 88 ~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~ 150 (272)
T PRK08159 88 KLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYY 150 (272)
T ss_pred CCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEecc
Confidence 789999998731 1123334566677898888765
No 316
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=96.20 E-value=0.028 Score=45.00 Aligned_cols=89 Identities=22% Similarity=0.282 Sum_probs=56.1
Q ss_pred CEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEEeCCCHHHHHHhcCCccEEEEcCCCchhHHHH
Q 022313 182 KSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHPFDAY 261 (299)
Q Consensus 182 ~~vlI~G~g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~ 261 (299)
.+|-++|.|.+|...++-+...|.+|++.++++++.+.+. +.|+... .+ ..++....|+|+-++.+....+.+
T Consensus 2 ~~Ig~IGlG~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~-~~g~~~~---~s---~~e~~~~~dvvi~~v~~~~~v~~v 74 (163)
T PF03446_consen 2 MKIGFIGLGNMGSAMARNLAKAGYEVTVYDRSPEKAEALA-EAGAEVA---DS---PAEAAEQADVVILCVPDDDAVEAV 74 (163)
T ss_dssp BEEEEE--SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHH-HTTEEEE---SS---HHHHHHHBSEEEE-SSSHHHHHHH
T ss_pred CEEEEEchHHHHHHHHHHHHhcCCeEEeeccchhhhhhhH-Hhhhhhh---hh---hhhHhhcccceEeecccchhhhhh
Confidence 3688999999999999999999999999999999988884 4463222 11 122223458888887775434443
Q ss_pred H------HhcccCcEEEEEcCC
Q 022313 262 M------SLLKVAGVYVLVGFP 277 (299)
Q Consensus 262 ~------~~l~~~G~~v~~g~~ 277 (299)
+ ..++++..+++.+..
T Consensus 75 ~~~~~i~~~l~~g~iiid~sT~ 96 (163)
T PF03446_consen 75 LFGENILAGLRPGKIIIDMSTI 96 (163)
T ss_dssp HHCTTHGGGS-TTEEEEE-SS-
T ss_pred hhhhHHhhccccceEEEecCCc
Confidence 3 334555566665443
No 317
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=96.20 E-value=0.041 Score=47.19 Aligned_cols=75 Identities=17% Similarity=0.177 Sum_probs=53.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHh---cCCCEE---EeCCCHHHHHHh-------cCCc
Q 022313 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL---LGADKF---VVSSDLEQMKAL-------GKSL 245 (299)
Q Consensus 180 ~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~---~g~~~v---~~~~~~~~~~~~-------~~~~ 245 (299)
+++++||.|+ |.+|...++.+...|++|+++++++++.+++.++ .+.+.. .|..+.+.+.++ .++.
T Consensus 6 ~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 85 (262)
T PRK13394 6 NGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGSV 85 (262)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 4789999998 9999999999999999999999998766555433 343221 233444443322 2568
Q ss_pred cEEEEcCCC
Q 022313 246 DFIIDTASG 254 (299)
Q Consensus 246 d~v~d~~g~ 254 (299)
|+++.+.|.
T Consensus 86 d~vi~~ag~ 94 (262)
T PRK13394 86 DILVSNAGI 94 (262)
T ss_pred CEEEECCcc
Confidence 999998874
No 318
>PRK05875 short chain dehydrogenase; Provisional
Probab=96.18 E-value=0.036 Score=48.11 Aligned_cols=75 Identities=20% Similarity=0.201 Sum_probs=52.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcC------CCEEE--eCCCHHHHHHh-------cC
Q 022313 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLG------ADKFV--VSSDLEQMKAL-------GK 243 (299)
Q Consensus 180 ~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g------~~~v~--~~~~~~~~~~~-------~~ 243 (299)
+++++||.|+ |.+|...++.+...|++|+++.++.++.+...+++. .-.++ |..+.+.+..+ .+
T Consensus 6 ~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 85 (276)
T PRK05875 6 QDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWHG 85 (276)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 4689999998 899999999999999999999998776554433321 11222 33344333222 25
Q ss_pred CccEEEEcCCC
Q 022313 244 SLDFIIDTASG 254 (299)
Q Consensus 244 ~~d~v~d~~g~ 254 (299)
++|+++.+.|.
T Consensus 86 ~~d~li~~ag~ 96 (276)
T PRK05875 86 RLHGVVHCAGG 96 (276)
T ss_pred CCCEEEECCCc
Confidence 78999999873
No 319
>PRK07035 short chain dehydrogenase; Provisional
Probab=96.17 E-value=0.041 Score=47.05 Aligned_cols=75 Identities=25% Similarity=0.352 Sum_probs=52.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhc---CCC-EEE--eCCCHHHHHHh-------cCCc
Q 022313 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL---GAD-KFV--VSSDLEQMKAL-------GKSL 245 (299)
Q Consensus 180 ~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~---g~~-~v~--~~~~~~~~~~~-------~~~~ 245 (299)
++++++|.|+ |++|...++.+...|++|++++++.++.+.+.+++ +.. ..+ +..+.+.+.++ .+.+
T Consensus 7 ~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 86 (252)
T PRK07035 7 TGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHGRL 86 (252)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 4678999987 89999999999999999999999877766554443 321 222 33343333221 2578
Q ss_pred cEEEEcCCC
Q 022313 246 DFIIDTASG 254 (299)
Q Consensus 246 d~v~d~~g~ 254 (299)
|+++.+.+.
T Consensus 87 d~li~~ag~ 95 (252)
T PRK07035 87 DILVNNAAA 95 (252)
T ss_pred CEEEECCCc
Confidence 999998873
No 320
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=96.17 E-value=0.056 Score=45.77 Aligned_cols=70 Identities=24% Similarity=0.274 Sum_probs=54.2
Q ss_pred EEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchH--HHHHHHhcCCCEEE-eCCCHHHHHHhcCCccEEEEcCCC
Q 022313 184 LGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSK--KEEALSLLGADKFV-VSSDLEQMKALGKSLDFIIDTASG 254 (299)
Q Consensus 184 vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~--~~~~~~~~g~~~v~-~~~~~~~~~~~~~~~d~v~d~~g~ 254 (299)
|+|+|+ |.+|...++.+...+.+|.+++|+... ...+ +..|++.+. +..+.+.+.+.-+++|.||.+++.
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l-~~~g~~vv~~d~~~~~~l~~al~g~d~v~~~~~~ 74 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQL-QALGAEVVEADYDDPESLVAALKGVDAVFSVTPP 74 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHH-HHTTTEEEES-TT-HHHHHHHHTTCSEEEEESSC
T ss_pred CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhh-hcccceEeecccCCHHHHHHHHcCCceEEeecCc
Confidence 689998 999999999999988899999998743 3444 567875543 455667777666899999999993
No 321
>PRK13243 glyoxylate reductase; Reviewed
Probab=96.15 E-value=0.035 Score=49.99 Aligned_cols=88 Identities=23% Similarity=0.390 Sum_probs=59.6
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEEeCCCHHHHHHhcCCccEEEEcCCCch---
Q 022313 180 PGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDH--- 256 (299)
Q Consensus 180 ~g~~vlI~G~g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~v~d~~g~~~--- 256 (299)
.|++|.|+|.|.+|...++.++..|.+|++++++..... . +.++... . .+.++-...|+|+.++....
T Consensus 149 ~gktvgIiG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~-~-~~~~~~~----~---~l~ell~~aDiV~l~lP~t~~T~ 219 (333)
T PRK13243 149 YGKTIGIIGFGRIGQAVARRAKGFGMRILYYSRTRKPEA-E-KELGAEY----R---PLEELLRESDFVSLHVPLTKETY 219 (333)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCChhh-H-HHcCCEe----c---CHHHHHhhCCEEEEeCCCChHHh
Confidence 678999999999999999999999999999998754432 2 3444321 1 22333355677777776432
Q ss_pred --hHHHHHHhcccCcEEEEEcC
Q 022313 257 --PFDAYMSLLKVAGVYVLVGF 276 (299)
Q Consensus 257 --~~~~~~~~l~~~G~~v~~g~ 276 (299)
.-...+..++++..++.++-
T Consensus 220 ~~i~~~~~~~mk~ga~lIN~aR 241 (333)
T PRK13243 220 HMINEERLKLMKPTAILVNTAR 241 (333)
T ss_pred hccCHHHHhcCCCCeEEEECcC
Confidence 12345667777777776653
No 322
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=96.15 E-value=0.048 Score=46.20 Aligned_cols=75 Identities=29% Similarity=0.374 Sum_probs=53.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCC-EE--EeCCCHHHHHHh-------cCCccEE
Q 022313 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGAD-KF--VVSSDLEQMKAL-------GKSLDFI 248 (299)
Q Consensus 180 ~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~-~v--~~~~~~~~~~~~-------~~~~d~v 248 (299)
+++++||.|+ |.+|...++.+...|+.|++..++.++.+.+.+..+.. .+ .+-.+.+.++++ .+++|.+
T Consensus 5 ~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 84 (245)
T PRK12936 5 SGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEGVDIL 84 (245)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 4678999998 99999999999889999998888877777664555422 12 233344443332 2579999
Q ss_pred EEcCCC
Q 022313 249 IDTASG 254 (299)
Q Consensus 249 ~d~~g~ 254 (299)
+.+.|.
T Consensus 85 i~~ag~ 90 (245)
T PRK12936 85 VNNAGI 90 (245)
T ss_pred EECCCC
Confidence 999884
No 323
>TIGR02371 ala_DH_arch alanine dehydrogenase, Archaeoglobus fulgidus type. This enzyme, a homolog of bacterial ornithine cyclodeaminases and marsupial mu-crystallins, is a homodimeric, NAD-dependent alanine dehydrogenase found in Archaeoglobus fulgidus and several other Archaea. For a number of close homologs, scoring between trusted and noise cutoffs, it is not clear at present what is the enzymatic activity.
Probab=96.15 E-value=0.032 Score=50.04 Aligned_cols=107 Identities=15% Similarity=0.191 Sum_probs=70.6
Q ss_pred hhccCCCCCCEEEEEcCChHHHHHHHHHHHC-CC-eEEEEeCCchHHHHHHHhc---CCCEEEeCCCHHHHHHhcCCccE
Q 022313 173 MRHKMNQPGKSLGVIGLGGLGHMAVKFGKAF-GL-NVTVLSTSTSKKEEALSLL---GADKFVVSSDLEQMKALGKSLDF 247 (299)
Q Consensus 173 ~~~~~~~~g~~vlI~G~g~~G~~a~~~a~~~-g~-~v~~~~~~~~~~~~~~~~~---g~~~v~~~~~~~~~~~~~~~~d~ 247 (299)
+...+ +...++.|+|+|..|.+-+..+... .. +|.+.+++.++.+.+.+++ |.. +.... ...+..++.|+
T Consensus 121 ~~La~-~~~~~lgiiG~G~qA~~~l~al~~~~~~~~v~V~~r~~~~~~~~~~~~~~~g~~-v~~~~---~~~eav~~aDi 195 (325)
T TIGR02371 121 KYLAR-KDSSVLGIIGAGRQAWTQLEALSRVFDLEEVSVYCRTPSTREKFALRASDYEVP-VRAAT---DPREAVEGCDI 195 (325)
T ss_pred HHhCC-CCCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHhhCCc-EEEeC---CHHHHhccCCE
Confidence 33444 5668899999999998766555433 33 8999999999887765543 322 11122 22344478999
Q ss_pred EEEcCCCchhHHHHHHhcccCcEEEEEcCC--CceeeChh
Q 022313 248 IIDTASGDHPFDAYMSLLKVAGVYVLVGFP--SKVKFSPA 285 (299)
Q Consensus 248 v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~--~~~~~~~~ 285 (299)
|+-|+.....+ -....++++-.+..+|.. ....++..
T Consensus 196 VitaT~s~~P~-~~~~~l~~g~~v~~vGs~~p~~~Eld~~ 234 (325)
T TIGR02371 196 LVTTTPSRKPV-VKADWVSEGTHINAIGADAPGKQELDPE 234 (325)
T ss_pred EEEecCCCCcE-ecHHHcCCCCEEEecCCCCcccccCCHH
Confidence 99988764411 234578999999999976 44555544
No 324
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=96.15 E-value=0.041 Score=47.36 Aligned_cols=72 Identities=25% Similarity=0.213 Sum_probs=51.1
Q ss_pred EEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhc---CCCEEE--eCCCHHHHHHh-------cCCccEEE
Q 022313 183 SLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL---GADKFV--VSSDLEQMKAL-------GKSLDFII 249 (299)
Q Consensus 183 ~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~---g~~~v~--~~~~~~~~~~~-------~~~~d~v~ 249 (299)
++||.|+ +++|...++.+...|++|+++++++++.+.+.+++ +....+ |..+.+.+.++ .+++|+++
T Consensus 2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~li 81 (259)
T PRK08340 2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDALV 81 (259)
T ss_pred eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence 6899987 89999999999889999999999987766554443 322222 33344443322 26799999
Q ss_pred EcCCC
Q 022313 250 DTASG 254 (299)
Q Consensus 250 d~~g~ 254 (299)
.+.|.
T Consensus 82 ~naG~ 86 (259)
T PRK08340 82 WNAGN 86 (259)
T ss_pred ECCCC
Confidence 99874
No 325
>PRK08317 hypothetical protein; Provisional
Probab=96.15 E-value=0.056 Score=45.64 Aligned_cols=99 Identities=20% Similarity=0.238 Sum_probs=65.3
Q ss_pred cCCCCCCEEEEEcCChHHHHHHHHHHHCC--CeEEEEeCCchHHHHHHHhc---CC-CEEEeCCCHHHHHHhcCCccEEE
Q 022313 176 KMNQPGKSLGVIGLGGLGHMAVKFGKAFG--LNVTVLSTSTSKKEEALSLL---GA-DKFVVSSDLEQMKALGKSLDFII 249 (299)
Q Consensus 176 ~~~~~g~~vlI~G~g~~G~~a~~~a~~~g--~~v~~~~~~~~~~~~~~~~~---g~-~~v~~~~~~~~~~~~~~~~d~v~ 249 (299)
..+.++.+||-+|+|. |..+..+++..+ .+++.++.+++..+.+.+.. +. ..+... +........+.||+|+
T Consensus 15 ~~~~~~~~vLdiG~G~-G~~~~~~a~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~-d~~~~~~~~~~~D~v~ 92 (241)
T PRK08317 15 LAVQPGDRVLDVGCGP-GNDARELARRVGPEGRVVGIDRSEAMLALAKERAAGLGPNVEFVRG-DADGLPFPDGSFDAVR 92 (241)
T ss_pred cCCCCCCEEEEeCCCC-CHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHhhCCCCceEEEec-ccccCCCCCCCceEEE
Confidence 3448889999999976 888888888763 58999999988877774431 11 122221 1111111235789887
Q ss_pred EcC-----CC-chhHHHHHHhcccCcEEEEEcC
Q 022313 250 DTA-----SG-DHPFDAYMSLLKVAGVYVLVGF 276 (299)
Q Consensus 250 d~~-----g~-~~~~~~~~~~l~~~G~~v~~g~ 276 (299)
... .. ...+..+.++|+++|.++....
T Consensus 93 ~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 125 (241)
T PRK08317 93 SDRVLQHLEDPARALAEIARVLRPGGRVVVLDT 125 (241)
T ss_pred EechhhccCCHHHHHHHHHHHhcCCcEEEEEec
Confidence 532 22 2357889999999999987653
No 326
>PRK06197 short chain dehydrogenase; Provisional
Probab=96.14 E-value=0.029 Score=49.67 Aligned_cols=75 Identities=25% Similarity=0.304 Sum_probs=52.2
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhc----C-CC-EE--EeCCCHHHHHHh-------c
Q 022313 179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL----G-AD-KF--VVSSDLEQMKAL-------G 242 (299)
Q Consensus 179 ~~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~----g-~~-~v--~~~~~~~~~~~~-------~ 242 (299)
..+++++|.|+ |++|..+++.+...|++|+++.++.++.+.+.+++ + .. .+ .|..+.+.+.++ .
T Consensus 14 ~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~ 93 (306)
T PRK06197 14 QSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAAY 93 (306)
T ss_pred CCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhhC
Confidence 46789999998 99999999988888999999999877655433222 1 11 12 244444443332 2
Q ss_pred CCccEEEEcCC
Q 022313 243 KSLDFIIDTAS 253 (299)
Q Consensus 243 ~~~d~v~d~~g 253 (299)
+++|+++.++|
T Consensus 94 ~~iD~li~nAg 104 (306)
T PRK06197 94 PRIDLLINNAG 104 (306)
T ss_pred CCCCEEEECCc
Confidence 57899999987
No 327
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=96.14 E-value=0.062 Score=46.06 Aligned_cols=75 Identities=16% Similarity=0.187 Sum_probs=50.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCch-HHHHHHHhcCCCE---EEeCCCHHHHHHh-------cCCccE
Q 022313 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTS-KKEEALSLLGADK---FVVSSDLEQMKAL-------GKSLDF 247 (299)
Q Consensus 180 ~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~-~~~~~~~~~g~~~---v~~~~~~~~~~~~-------~~~~d~ 247 (299)
+++++||.|+ +++|.+.++.+...|++|+++.++.. +.....++.+... ..|..+.+.+.++ .+++|+
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~iD~ 86 (251)
T PRK12481 7 NGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMGHIDI 86 (251)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 5789999998 89999999999999999998887542 2222223445322 1244444443332 267999
Q ss_pred EEEcCCC
Q 022313 248 IIDTASG 254 (299)
Q Consensus 248 v~d~~g~ 254 (299)
++.+.|.
T Consensus 87 lv~~ag~ 93 (251)
T PRK12481 87 LINNAGI 93 (251)
T ss_pred EEECCCc
Confidence 9999873
No 328
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=96.13 E-value=0.039 Score=47.26 Aligned_cols=75 Identities=19% Similarity=0.302 Sum_probs=53.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhc---CCCE-E--EeCCCHHHHHHh-------cCCc
Q 022313 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL---GADK-F--VVSSDLEQMKAL-------GKSL 245 (299)
Q Consensus 180 ~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~---g~~~-v--~~~~~~~~~~~~-------~~~~ 245 (299)
.++++||.|+ |++|...++.+...|++|+++++++++.+.+.+++ +... . .|-.+.+.+.++ .+++
T Consensus 8 ~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 87 (254)
T PRK08085 8 AGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGPI 87 (254)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCCC
Confidence 5778999998 89999999999999999999999877766554333 2211 1 233444433322 2579
Q ss_pred cEEEEcCCC
Q 022313 246 DFIIDTASG 254 (299)
Q Consensus 246 d~v~d~~g~ 254 (299)
|+++.+.|.
T Consensus 88 d~vi~~ag~ 96 (254)
T PRK08085 88 DVLINNAGI 96 (254)
T ss_pred CEEEECCCc
Confidence 999999984
No 329
>PRK06172 short chain dehydrogenase; Provisional
Probab=96.13 E-value=0.041 Score=47.08 Aligned_cols=75 Identities=27% Similarity=0.301 Sum_probs=52.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHh---cCCC-EE--EeCCCHHHHHHh-------cCCc
Q 022313 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL---LGAD-KF--VVSSDLEQMKAL-------GKSL 245 (299)
Q Consensus 180 ~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~---~g~~-~v--~~~~~~~~~~~~-------~~~~ 245 (299)
++++++|.|+ |++|...++.+...|++|+++++++++.+.+.+. .+.. .. .+..+.+.+.++ .+++
T Consensus 6 ~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i 85 (253)
T PRK06172 6 SGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGRL 85 (253)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence 5689999998 8999999998888999999999988765544332 3322 12 233344333322 2578
Q ss_pred cEEEEcCCC
Q 022313 246 DFIIDTASG 254 (299)
Q Consensus 246 d~v~d~~g~ 254 (299)
|+++.+.|.
T Consensus 86 d~li~~ag~ 94 (253)
T PRK06172 86 DYAFNNAGI 94 (253)
T ss_pred CEEEECCCC
Confidence 999998874
No 330
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=96.12 E-value=0.045 Score=47.01 Aligned_cols=75 Identities=25% Similarity=0.305 Sum_probs=53.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhc---CCC-EE--EeCCCHHHHHHh-------cCCc
Q 022313 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL---GAD-KF--VVSSDLEQMKAL-------GKSL 245 (299)
Q Consensus 180 ~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~---g~~-~v--~~~~~~~~~~~~-------~~~~ 245 (299)
+++++||.|+ |.+|...++.+...|++|++++++.++.+.+.+.+ +.. .+ .|..+.+.+.++ .+++
T Consensus 11 ~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~~i 90 (259)
T PRK08213 11 SGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFGHV 90 (259)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 5689999997 99999999999999999999999887766553332 221 12 244454444321 2578
Q ss_pred cEEEEcCCC
Q 022313 246 DFIIDTASG 254 (299)
Q Consensus 246 d~v~d~~g~ 254 (299)
|.++.+.|.
T Consensus 91 d~vi~~ag~ 99 (259)
T PRK08213 91 DILVNNAGA 99 (259)
T ss_pred CEEEECCCC
Confidence 999999874
No 331
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=96.11 E-value=0.039 Score=49.14 Aligned_cols=89 Identities=16% Similarity=0.241 Sum_probs=60.9
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEEeCCCHHHHHHhcCCccEEEEcCCCchh-
Q 022313 179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHP- 257 (299)
Q Consensus 179 ~~g~~vlI~G~g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~v~d~~g~~~~- 257 (299)
-.+++|.|+|.|.+|...++.++.+|.+|++++++.+... +.+.+. ....+.++-...|+|+.++.....
T Consensus 134 l~g~tvgIvG~G~IG~~vA~~l~afG~~V~~~~~~~~~~~------~~~~~~---~~~~l~e~l~~aDvvv~~lPlt~~T 204 (312)
T PRK15469 134 REDFTIGILGAGVLGSKVAQSLQTWGFPLRCWSRSRKSWP------GVQSFA---GREELSAFLSQTRVLINLLPNTPET 204 (312)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCCCCC------Cceeec---ccccHHHHHhcCCEEEECCCCCHHH
Confidence 4678999999999999999999999999999987643321 112211 112344455667888887775431
Q ss_pred ----HHHHHHhcccCcEEEEEcC
Q 022313 258 ----FDAYMSLLKVAGVYVLVGF 276 (299)
Q Consensus 258 ----~~~~~~~l~~~G~~v~~g~ 276 (299)
-...++.|+++..++.+|-
T Consensus 205 ~~li~~~~l~~mk~ga~lIN~aR 227 (312)
T PRK15469 205 VGIINQQLLEQLPDGAYLLNLAR 227 (312)
T ss_pred HHHhHHHHHhcCCCCcEEEECCC
Confidence 2345677888877777763
No 332
>PRK08644 thiamine biosynthesis protein ThiF; Provisional
Probab=96.11 E-value=0.04 Score=46.24 Aligned_cols=88 Identities=16% Similarity=0.191 Sum_probs=52.7
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCch------------------HHHHHH---HhcCC-CEEE--e-CC
Q 022313 180 PGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTS------------------KKEEAL---SLLGA-DKFV--V-SS 233 (299)
Q Consensus 180 ~g~~vlI~G~g~~G~~a~~~a~~~g~-~v~~~~~~~~------------------~~~~~~---~~~g~-~~v~--~-~~ 233 (299)
+..+|+|+|+|++|...++.+.+.|. ++++++.+.- +.+.++ ++++. ..+. + .-
T Consensus 27 ~~~~V~ViG~GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~lnp~v~v~~~~~~i 106 (212)
T PRK08644 27 KKAKVGIAGAGGLGSNIAVALARSGVGNLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEINPFVEIEAHNEKI 106 (212)
T ss_pred hCCCEEEECcCHHHHHHHHHHHHcCCCeEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHHCCCCEEEEEeeec
Confidence 44679999999999999999999998 6888876621 111111 22221 1111 1 11
Q ss_pred CHHHHHHhcCCccEEEEcCCCchhHHHHHHhccc
Q 022313 234 DLEQMKALGKSLDFIIDTASGDHPFDAYMSLLKV 267 (299)
Q Consensus 234 ~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~ 267 (299)
+.+...++-+++|+|++|+..........+....
T Consensus 107 ~~~~~~~~~~~~DvVI~a~D~~~~r~~l~~~~~~ 140 (212)
T PRK08644 107 DEDNIEELFKDCDIVVEAFDNAETKAMLVETVLE 140 (212)
T ss_pred CHHHHHHHHcCCCEEEECCCCHHHHHHHHHHHHH
Confidence 1233334447899999998887633333333333
No 333
>PRK08291 ectoine utilization protein EutC; Validated
Probab=96.11 E-value=0.034 Score=49.97 Aligned_cols=101 Identities=22% Similarity=0.281 Sum_probs=67.6
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHH-CCC-eEEEEeCCchHHHHHHHhc----CCCEEEeCCCHHHHHHhcCCccEEEEcC
Q 022313 179 QPGKSLGVIGLGGLGHMAVKFGKA-FGL-NVTVLSTSTSKKEEALSLL----GADKFVVSSDLEQMKALGKSLDFIIDTA 252 (299)
Q Consensus 179 ~~g~~vlI~G~g~~G~~a~~~a~~-~g~-~v~~~~~~~~~~~~~~~~~----g~~~v~~~~~~~~~~~~~~~~d~v~d~~ 252 (299)
+..++++|+|+|..|.+.+..+.. .+. +|.+..+++++.+.+.+++ |.. +....+ +.+.-.+.|+|+.++
T Consensus 130 ~~~~~v~IiGaG~~a~~~~~al~~~~~~~~V~v~~R~~~~a~~l~~~~~~~~g~~-v~~~~d---~~~al~~aDiVi~aT 205 (330)
T PRK08291 130 EDASRAAVIGAGEQARLQLEALTLVRPIREVRVWARDAAKAEAYAADLRAELGIP-VTVARD---VHEAVAGADIIVTTT 205 (330)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHhhccCce-EEEeCC---HHHHHccCCEEEEee
Confidence 455789999999999887776664 455 8999999999888876654 332 222232 223335689999998
Q ss_pred CCchh-HHHHHHhcccCcEEEEEcCC--CceeeChh
Q 022313 253 SGDHP-FDAYMSLLKVAGVYVLVGFP--SKVKFSPA 285 (299)
Q Consensus 253 g~~~~-~~~~~~~l~~~G~~v~~g~~--~~~~~~~~ 285 (299)
..... +.. ..++++-.+..+|.. ....+++.
T Consensus 206 ~s~~p~i~~--~~l~~g~~v~~vg~d~~~~rEld~~ 239 (330)
T PRK08291 206 PSEEPILKA--EWLHPGLHVTAMGSDAEHKNEIAPA 239 (330)
T ss_pred CCCCcEecH--HHcCCCceEEeeCCCCCCcccCCHH
Confidence 87542 222 347788788888876 34444443
No 334
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.10 E-value=0.048 Score=47.60 Aligned_cols=95 Identities=17% Similarity=0.214 Sum_probs=71.0
Q ss_pred ccchhhHHHHHHhhhccCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEEeCCCHHHH
Q 022313 160 PLLCAGITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQM 238 (299)
Q Consensus 160 ~~~~~~~ta~~al~~~~~~~~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 238 (299)
.+||...+....++....--.|+++.|+|. +.+|.-.+.++...|++|++.-.... .+
T Consensus 137 ~~PcTp~avi~lL~~~~i~l~Gk~v~vIG~S~ivG~Pla~lL~~~gatVtv~~s~t~---------------------~l 195 (284)
T PRK14179 137 MIPCTPAGIMEMFREYNVELEGKHAVVIGRSNIVGKPMAQLLLDKNATVTLTHSRTR---------------------NL 195 (284)
T ss_pred CcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcCcHHHHHHHHHCCCEEEEECCCCC---------------------CH
Confidence 456666666666665544468999999998 89999999999999999988732211 12
Q ss_pred HHhcCCccEEEEcCCCchhHHHHHHhcccCcEEEEEcCC
Q 022313 239 KALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP 277 (299)
Q Consensus 239 ~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~ 277 (299)
.+..+..|+|+-++|.+..+... .++++..++++|..
T Consensus 196 ~~~~~~ADIVI~avg~~~~v~~~--~ik~GavVIDvgin 232 (284)
T PRK14179 196 AEVARKADILVVAIGRGHFVTKE--FVKEGAVVIDVGMN 232 (284)
T ss_pred HHHHhhCCEEEEecCccccCCHH--HccCCcEEEEecce
Confidence 23346689999999988766554 49999999999866
No 335
>PLN03139 formate dehydrogenase; Provisional
Probab=96.10 E-value=0.034 Score=50.88 Aligned_cols=90 Identities=19% Similarity=0.204 Sum_probs=59.2
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEEeCCCHHHHHHhcCCccEEEEcCCCchh-
Q 022313 179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHP- 257 (299)
Q Consensus 179 ~~g~~vlI~G~g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~v~d~~g~~~~- 257 (299)
-.|++|.|+|.|.+|...++.++.+|.+|++++++....+.. ++.|...+ +.+.++....|+|+.++....-
T Consensus 197 L~gktVGIVG~G~IG~~vA~~L~afG~~V~~~d~~~~~~~~~-~~~g~~~~------~~l~ell~~sDvV~l~lPlt~~T 269 (386)
T PLN03139 197 LEGKTVGTVGAGRIGRLLLQRLKPFNCNLLYHDRLKMDPELE-KETGAKFE------EDLDAMLPKCDVVVINTPLTEKT 269 (386)
T ss_pred CCCCEEEEEeecHHHHHHHHHHHHCCCEEEEECCCCcchhhH-hhcCceec------CCHHHHHhhCCEEEEeCCCCHHH
Confidence 367899999999999999999999999999998875333333 34453221 1233343556777776664221
Q ss_pred ----HHHHHHhcccCcEEEEEc
Q 022313 258 ----FDAYMSLLKVAGVYVLVG 275 (299)
Q Consensus 258 ----~~~~~~~l~~~G~~v~~g 275 (299)
-...+..|+++..+|.++
T Consensus 270 ~~li~~~~l~~mk~ga~lIN~a 291 (386)
T PLN03139 270 RGMFNKERIAKMKKGVLIVNNA 291 (386)
T ss_pred HHHhCHHHHhhCCCCeEEEECC
Confidence 123556777777666665
No 336
>PRK07074 short chain dehydrogenase; Provisional
Probab=96.09 E-value=0.064 Score=45.97 Aligned_cols=74 Identities=20% Similarity=0.221 Sum_probs=53.1
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCC--E--EEeCCCHHHHHHh-------cCCccEE
Q 022313 181 GKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGAD--K--FVVSSDLEQMKAL-------GKSLDFI 248 (299)
Q Consensus 181 g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~--~--v~~~~~~~~~~~~-------~~~~d~v 248 (299)
++++||.|+ |.+|...+..+...|++|++++++.++.+.+.+++... + ..+..+.+.+... .+++|++
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v 81 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGPVDVL 81 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 468999998 89999999988888999999999988777665544311 1 2244444444322 1468999
Q ss_pred EEcCCC
Q 022313 249 IDTASG 254 (299)
Q Consensus 249 ~d~~g~ 254 (299)
+.+.|.
T Consensus 82 i~~ag~ 87 (257)
T PRK07074 82 VANAGA 87 (257)
T ss_pred EECCCC
Confidence 999974
No 337
>PRK04148 hypothetical protein; Provisional
Probab=96.09 E-value=0.083 Score=40.72 Aligned_cols=88 Identities=20% Similarity=0.178 Sum_probs=56.7
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEEeCCCHHHHHHhcCCccEEEEcCCCchhH
Q 022313 179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHPF 258 (299)
Q Consensus 179 ~~g~~vlI~G~g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~v~d~~g~~~~~ 258 (299)
.++.+++++|.| .|...+..+...|..|++++.+++..+.+ ++.+...+.+.--... .++-+++|+++..-..+...
T Consensus 15 ~~~~kileIG~G-fG~~vA~~L~~~G~~ViaIDi~~~aV~~a-~~~~~~~v~dDlf~p~-~~~y~~a~liysirpp~el~ 91 (134)
T PRK04148 15 GKNKKIVELGIG-FYFKVAKKLKESGFDVIVIDINEKAVEKA-KKLGLNAFVDDLFNPN-LEIYKNAKLIYSIRPPRDLQ 91 (134)
T ss_pred ccCCEEEEEEec-CCHHHHHHHHHCCCEEEEEECCHHHHHHH-HHhCCeEEECcCCCCC-HHHHhcCCEEEEeCCCHHHH
Confidence 456889999999 78755555557899999999999998888 4556543332111000 12336788888877776644
Q ss_pred HHHHHhcccCc
Q 022313 259 DAYMSLLKVAG 269 (299)
Q Consensus 259 ~~~~~~l~~~G 269 (299)
...++..+.-+
T Consensus 92 ~~~~~la~~~~ 102 (134)
T PRK04148 92 PFILELAKKIN 102 (134)
T ss_pred HHHHHHHHHcC
Confidence 44444444433
No 338
>PLN02928 oxidoreductase family protein
Probab=96.09 E-value=0.034 Score=50.33 Aligned_cols=95 Identities=20% Similarity=0.267 Sum_probs=61.5
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcC-----CCEEEe-CCCHHHHHHhcCCccEEEEcC
Q 022313 179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLG-----ADKFVV-SSDLEQMKALGKSLDFIIDTA 252 (299)
Q Consensus 179 ~~g~~vlI~G~g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g-----~~~v~~-~~~~~~~~~~~~~~d~v~d~~ 252 (299)
-.|+++.|+|.|.+|..+++.++.+|.+|++++++....... .++ ...... ......+.++-...|+|+.++
T Consensus 157 l~gktvGIiG~G~IG~~vA~~l~afG~~V~~~dr~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~L~ell~~aDiVvl~l 234 (347)
T PLN02928 157 LFGKTVFILGYGAIGIELAKRLRPFGVKLLATRRSWTSEPED--GLLIPNGDVDDLVDEKGGHEDIYEFAGEADIVVLCC 234 (347)
T ss_pred CCCCEEEEECCCHHHHHHHHHHhhCCCEEEEECCCCChhhhh--hhccccccccccccccCcccCHHHHHhhCCEEEECC
Confidence 467899999999999999999999999999998874322111 110 000000 001223445556678888877
Q ss_pred CCch-----hHHHHHHhcccCcEEEEEc
Q 022313 253 SGDH-----PFDAYMSLLKVAGVYVLVG 275 (299)
Q Consensus 253 g~~~-----~~~~~~~~l~~~G~~v~~g 275 (299)
.... .-...+..|+++..+|.+|
T Consensus 235 Plt~~T~~li~~~~l~~Mk~ga~lINva 262 (347)
T PLN02928 235 TLTKETAGIVNDEFLSSMKKGALLVNIA 262 (347)
T ss_pred CCChHhhcccCHHHHhcCCCCeEEEECC
Confidence 6422 2345677888888887775
No 339
>PRK06482 short chain dehydrogenase; Provisional
Probab=96.08 E-value=0.066 Score=46.48 Aligned_cols=73 Identities=16% Similarity=0.155 Sum_probs=52.5
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCC-EE--EeCCCHHHHHHh-------cCCccEEEE
Q 022313 182 KSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGAD-KF--VVSSDLEQMKAL-------GKSLDFIID 250 (299)
Q Consensus 182 ~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~-~v--~~~~~~~~~~~~-------~~~~d~v~d 250 (299)
+++||.|+ |.+|...++.+...|++|++++++++..+.+.+..+.. .+ .|..+.+.+.++ .+++|++|.
T Consensus 3 k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~ 82 (276)
T PRK06482 3 KTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVVVS 82 (276)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 57999987 99999999998889999999999988777765444422 11 244444433321 257899999
Q ss_pred cCCC
Q 022313 251 TASG 254 (299)
Q Consensus 251 ~~g~ 254 (299)
+.|.
T Consensus 83 ~ag~ 86 (276)
T PRK06482 83 NAGY 86 (276)
T ss_pred CCCC
Confidence 9874
No 340
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=96.08 E-value=0.048 Score=46.59 Aligned_cols=72 Identities=15% Similarity=0.209 Sum_probs=52.2
Q ss_pred EEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCE-E--EeCCCHHHHHHh-------cCCccEEEEc
Q 022313 183 SLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADK-F--VVSSDLEQMKAL-------GKSLDFIIDT 251 (299)
Q Consensus 183 ~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~-v--~~~~~~~~~~~~-------~~~~d~v~d~ 251 (299)
+++|.|+ |++|...+..+...|++|+++++++++.+.+.+.++... . .|-.+.+.+.+. .++.|.++.+
T Consensus 2 ~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~~ 81 (248)
T PRK10538 2 IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLVNN 81 (248)
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 6889987 999999999999999999999999887777655555321 1 234444433322 2579999998
Q ss_pred CCC
Q 022313 252 ASG 254 (299)
Q Consensus 252 ~g~ 254 (299)
+|.
T Consensus 82 ag~ 84 (248)
T PRK10538 82 AGL 84 (248)
T ss_pred CCc
Confidence 874
No 341
>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.06 E-value=0.068 Score=46.71 Aligned_cols=96 Identities=17% Similarity=0.172 Sum_probs=72.1
Q ss_pred cccchhhHHHHHHhhhccCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEEeCCCHHH
Q 022313 159 APLLCAGITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQ 237 (299)
Q Consensus 159 a~~~~~~~ta~~al~~~~~~~~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~ 237 (299)
...||...+....++....--.|++++|+|. ..+|.-.+.++...+++|++.......+
T Consensus 142 ~~~PcTp~av~~ll~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVtv~hs~T~~l-------------------- 201 (287)
T PRK14176 142 GLVPCTPHGVIRALEEYGVDIEGKNAVIVGHSNVVGKPMAAMLLNRNATVSVCHVFTDDL-------------------- 201 (287)
T ss_pred CCCCCcHHHHHHHHHHcCCCCCCCEEEEECCCcccHHHHHHHHHHCCCEEEEEeccCCCH--------------------
Confidence 3567777777777766654358999999998 4699999999999999998877443222
Q ss_pred HHHhcCCccEEEEcCCCchhHHHHHHhcccCcEEEEEcCC
Q 022313 238 MKALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP 277 (299)
Q Consensus 238 ~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~ 277 (299)
++..+.+|+++.++|-+..+ -.+.++++..++++|..
T Consensus 202 -~~~~~~ADIvv~AvG~p~~i--~~~~vk~gavVIDvGin 238 (287)
T PRK14176 202 -KKYTLDADILVVATGVKHLI--KADMVKEGAVIFDVGIT 238 (287)
T ss_pred -HHHHhhCCEEEEccCCcccc--CHHHcCCCcEEEEeccc
Confidence 22336688999999987744 34589999999999975
No 342
>PRK06720 hypothetical protein; Provisional
Probab=96.06 E-value=0.061 Score=43.41 Aligned_cols=75 Identities=19% Similarity=0.216 Sum_probs=51.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhc---CCC-EEE--eCCCHHHHHHh-------cCCc
Q 022313 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL---GAD-KFV--VSSDLEQMKAL-------GKSL 245 (299)
Q Consensus 180 ~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~---g~~-~v~--~~~~~~~~~~~-------~~~~ 245 (299)
++++++|.|+ +++|...+..+...|++|++++++.+..+...+++ +.. ..+ +..+.+.+.++ -++.
T Consensus 15 ~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G~i 94 (169)
T PRK06720 15 AGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAFSRI 94 (169)
T ss_pred CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 5788999988 78999999988889999999998877654433332 422 122 33333333321 2578
Q ss_pred cEEEEcCCC
Q 022313 246 DFIIDTASG 254 (299)
Q Consensus 246 d~v~d~~g~ 254 (299)
|+++.+.|.
T Consensus 95 DilVnnAG~ 103 (169)
T PRK06720 95 DMLFQNAGL 103 (169)
T ss_pred CEEEECCCc
Confidence 999999884
No 343
>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]
Probab=96.06 E-value=0.072 Score=44.56 Aligned_cols=95 Identities=15% Similarity=0.049 Sum_probs=66.6
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCc-hHHHHHHHhcCCCEEEeCCCHHHHHHhcCCccEEEEcCCCchh
Q 022313 179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTST-SKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHP 257 (299)
Q Consensus 179 ~~g~~vlI~G~g~~G~~a~~~a~~~g~~v~~~~~~~-~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~v~d~~g~~~~ 257 (299)
-++++|+|+|+|.+|..=+.+....|++|+++...- .+...+.++.+.+.+-..-+. +...++++||-++++...
T Consensus 10 l~~k~VlvvGgG~va~rKa~~ll~~ga~v~Vvs~~~~~el~~~~~~~~i~~~~~~~~~----~~~~~~~lviaAt~d~~l 85 (210)
T COG1648 10 LEGKKVLVVGGGSVALRKARLLLKAGADVTVVSPEFEPELKALIEEGKIKWIEREFDA----EDLDDAFLVIAATDDEEL 85 (210)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEcCCccHHHHHHHHhcCcchhhcccCh----hhhcCceEEEEeCCCHHH
Confidence 467899999999999999999999999999998776 455555444332222111111 112349999999999885
Q ss_pred HHHHHHhcccCcEEEEEcCC
Q 022313 258 FDAYMSLLKVAGVYVLVGFP 277 (299)
Q Consensus 258 ~~~~~~~l~~~G~~v~~g~~ 277 (299)
-+...+..++.+.++.+...
T Consensus 86 n~~i~~~a~~~~i~vNv~D~ 105 (210)
T COG1648 86 NERIAKAARERRILVNVVDD 105 (210)
T ss_pred HHHHHHHHHHhCCceeccCC
Confidence 66677777777877766544
No 344
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.05 E-value=0.057 Score=46.65 Aligned_cols=75 Identities=15% Similarity=0.228 Sum_probs=49.9
Q ss_pred CCCCEEEEEcC-C--hHHHHHHHHHHHCCCeEEEEeCCch---HHHHHHHhcCCCEE--EeCCCHHHHHHh-------cC
Q 022313 179 QPGKSLGVIGL-G--GLGHMAVKFGKAFGLNVTVLSTSTS---KKEEALSLLGADKF--VVSSDLEQMKAL-------GK 243 (299)
Q Consensus 179 ~~g~~vlI~G~-g--~~G~~a~~~a~~~g~~v~~~~~~~~---~~~~~~~~~g~~~v--~~~~~~~~~~~~-------~~ 243 (299)
-++++++|.|+ + ++|.+.++.+...|++|++..+++. ..+++.++.|.... .|-.+.+.+.++ .+
T Consensus 6 ~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~g 85 (260)
T PRK06603 6 LQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKWG 85 (260)
T ss_pred cCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHcC
Confidence 35788999988 4 7999999888888999999887632 23333334453332 344454443332 26
Q ss_pred CccEEEEcCC
Q 022313 244 SLDFIIDTAS 253 (299)
Q Consensus 244 ~~d~v~d~~g 253 (299)
.+|+++++.|
T Consensus 86 ~iDilVnnag 95 (260)
T PRK06603 86 SFDFLLHGMA 95 (260)
T ss_pred CccEEEEccc
Confidence 7999999887
No 345
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=96.05 E-value=0.066 Score=46.56 Aligned_cols=74 Identities=24% Similarity=0.258 Sum_probs=52.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhc---CCC-EE--EeCCCHHHHHHh-------cCCc
Q 022313 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL---GAD-KF--VVSSDLEQMKAL-------GKSL 245 (299)
Q Consensus 180 ~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~---g~~-~v--~~~~~~~~~~~~-------~~~~ 245 (299)
++++++|.|+ |++|...++.+...|++|++++++++..+.+.+++ +.. .. .|..+.+.+..+ .+++
T Consensus 9 ~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 88 (278)
T PRK08277 9 KGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFGPC 88 (278)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 5788999987 89999999999999999999999877665554333 321 12 233344333322 2579
Q ss_pred cEEEEcCC
Q 022313 246 DFIIDTAS 253 (299)
Q Consensus 246 d~v~d~~g 253 (299)
|+++.++|
T Consensus 89 d~li~~ag 96 (278)
T PRK08277 89 DILINGAG 96 (278)
T ss_pred CEEEECCC
Confidence 99999987
No 346
>PRK07454 short chain dehydrogenase; Provisional
Probab=96.04 E-value=0.053 Score=45.98 Aligned_cols=76 Identities=17% Similarity=0.130 Sum_probs=52.8
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhc---CCC-EEE--eCCCHHHHHHh-------cCC
Q 022313 179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL---GAD-KFV--VSSDLEQMKAL-------GKS 244 (299)
Q Consensus 179 ~~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~---g~~-~v~--~~~~~~~~~~~-------~~~ 244 (299)
.+.++++|.|+ |.+|...+..+...|++|+++++++++.+.+.+++ +.. .++ |..+.+.+..+ .++
T Consensus 4 ~~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 83 (241)
T PRK07454 4 NSMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGC 83 (241)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 45678999987 99999999999999999999999887765553332 211 122 33344333222 256
Q ss_pred ccEEEEcCCC
Q 022313 245 LDFIIDTASG 254 (299)
Q Consensus 245 ~d~v~d~~g~ 254 (299)
.|+++.+.|.
T Consensus 84 id~lv~~ag~ 93 (241)
T PRK07454 84 PDVLINNAGM 93 (241)
T ss_pred CCEEEECCCc
Confidence 8999999884
No 347
>PRK07069 short chain dehydrogenase; Validated
Probab=96.04 E-value=0.12 Score=44.07 Aligned_cols=94 Identities=16% Similarity=0.156 Sum_probs=61.2
Q ss_pred EEEEcC-ChHHHHHHHHHHHCCCeEEEEeCC-chHHHHHHHhcC----CCE----EEeCCCHHHHHHh-------cCCcc
Q 022313 184 LGVIGL-GGLGHMAVKFGKAFGLNVTVLSTS-TSKKEEALSLLG----ADK----FVVSSDLEQMKAL-------GKSLD 246 (299)
Q Consensus 184 vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~-~~~~~~~~~~~g----~~~----v~~~~~~~~~~~~-------~~~~d 246 (299)
++|.|+ |++|...++.+...|++|++++++ .+..+++.+++. ... ..|..+.+.+.++ .++.|
T Consensus 2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 81 (251)
T PRK07069 2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGLS 81 (251)
T ss_pred EEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCcc
Confidence 788887 999999999998899999999987 555555433332 111 1244444443322 25789
Q ss_pred EEEEcCCCch-------------------------hHHHHHHhccc--CcEEEEEcCC
Q 022313 247 FIIDTASGDH-------------------------PFDAYMSLLKV--AGVYVLVGFP 277 (299)
Q Consensus 247 ~v~d~~g~~~-------------------------~~~~~~~~l~~--~G~~v~~g~~ 277 (299)
+++.+.|... ..+.+++.++. .|+++.++..
T Consensus 82 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~ 139 (251)
T PRK07069 82 VLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSV 139 (251)
T ss_pred EEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecCh
Confidence 9999987321 23445555543 3788888766
No 348
>PRK03612 spermidine synthase; Provisional
Probab=96.03 E-value=0.073 Score=50.96 Aligned_cols=96 Identities=19% Similarity=0.170 Sum_probs=63.8
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCC-CeEEEEeCCchHHHHHHHh--cC----------CCEEEeCCCHHHHHHhcCCc
Q 022313 179 QPGKSLGVIGLGGLGHMAVKFGKAFG-LNVTVLSTSTSKKEEALSL--LG----------ADKFVVSSDLEQMKALGKSL 245 (299)
Q Consensus 179 ~~g~~vlI~G~g~~G~~a~~~a~~~g-~~v~~~~~~~~~~~~~~~~--~g----------~~~v~~~~~~~~~~~~~~~~ 245 (299)
++.++||++|+|. |..+..++++.. .+|++++.+++-.+.+++. +. .-+++..+..+.+++..+.|
T Consensus 296 ~~~~rVL~IG~G~-G~~~~~ll~~~~v~~v~~VEid~~vi~~ar~~~~l~~~~~~~~~dprv~vi~~Da~~~l~~~~~~f 374 (521)
T PRK03612 296 ARPRRVLVLGGGD-GLALREVLKYPDVEQVTLVDLDPAMTELARTSPALRALNGGALDDPRVTVVNDDAFNWLRKLAEKF 374 (521)
T ss_pred CCCCeEEEEcCCc-cHHHHHHHhCCCcCeEEEEECCHHHHHHHHhCCcchhhhccccCCCceEEEEChHHHHHHhCCCCC
Confidence 4568899998863 556666666544 5999999998888877541 11 11233333334444455789
Q ss_pred cEEEEcCCCc-----------hhHHHHHHhcccCcEEEEEc
Q 022313 246 DFIIDTASGD-----------HPFDAYMSLLKVAGVYVLVG 275 (299)
Q Consensus 246 d~v~d~~g~~-----------~~~~~~~~~l~~~G~~v~~g 275 (299)
|+|+-....+ ..++.+.+.|+++|.++.-.
T Consensus 375 DvIi~D~~~~~~~~~~~L~t~ef~~~~~~~L~pgG~lv~~~ 415 (521)
T PRK03612 375 DVIIVDLPDPSNPALGKLYSVEFYRLLKRRLAPDGLLVVQS 415 (521)
T ss_pred CEEEEeCCCCCCcchhccchHHHHHHHHHhcCCCeEEEEec
Confidence 9998755432 23678889999999988653
No 349
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated
Probab=96.03 E-value=0.054 Score=49.63 Aligned_cols=77 Identities=22% Similarity=0.293 Sum_probs=51.1
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCC-------------------chHHHHHHHhc---C-CCEEEeC---
Q 022313 180 PGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTS-------------------TSKKEEALSLL---G-ADKFVVS--- 232 (299)
Q Consensus 180 ~g~~vlI~G~g~~G~~a~~~a~~~g~-~v~~~~~~-------------------~~~~~~~~~~~---g-~~~v~~~--- 232 (299)
.+.+|+|+|+|++|..++..+...|. ++++++.+ ..+.+.+++++ . ...+...
T Consensus 134 ~~~~VlvvG~GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~~~ 213 (376)
T PRK08762 134 LEARVLLIGAGGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAVQER 213 (376)
T ss_pred hcCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEEecc
Confidence 55789999999999999999999998 78888876 22333322222 2 1222111
Q ss_pred CCHHHHHHhcCCccEEEEcCCCch
Q 022313 233 SDLEQMKALGKSLDFIIDTASGDH 256 (299)
Q Consensus 233 ~~~~~~~~~~~~~d~v~d~~g~~~ 256 (299)
-+.+.+.++-+++|+|++|+.+..
T Consensus 214 ~~~~~~~~~~~~~D~Vv~~~d~~~ 237 (376)
T PRK08762 214 VTSDNVEALLQDVDVVVDGADNFP 237 (376)
T ss_pred CChHHHHHHHhCCCEEEECCCCHH
Confidence 122344444578999999999876
No 350
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.02 E-value=0.035 Score=47.06 Aligned_cols=75 Identities=24% Similarity=0.295 Sum_probs=51.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhc---CCC-EEE--eCCCHHHHHHh-------cCCc
Q 022313 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL---GAD-KFV--VSSDLEQMKAL-------GKSL 245 (299)
Q Consensus 180 ~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~---g~~-~v~--~~~~~~~~~~~-------~~~~ 245 (299)
.+++++|.|+ |.+|...+..+...|++|+++++++++.+++.+++ +.. .++ +..+.+.+.++ .+++
T Consensus 6 ~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 85 (239)
T PRK07666 6 QGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGSI 85 (239)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCCc
Confidence 3578999987 89999999988889999999999887665543332 221 122 33344433322 2579
Q ss_pred cEEEEcCCC
Q 022313 246 DFIIDTASG 254 (299)
Q Consensus 246 d~v~d~~g~ 254 (299)
|++|.+.|.
T Consensus 86 d~vi~~ag~ 94 (239)
T PRK07666 86 DILINNAGI 94 (239)
T ss_pred cEEEEcCcc
Confidence 999998874
No 351
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=96.02 E-value=0.054 Score=46.40 Aligned_cols=76 Identities=22% Similarity=0.262 Sum_probs=53.1
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHh---cCC-CEEE--eCCCHHHHHHh-------cCC
Q 022313 179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL---LGA-DKFV--VSSDLEQMKAL-------GKS 244 (299)
Q Consensus 179 ~~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~---~g~-~~v~--~~~~~~~~~~~-------~~~ 244 (299)
-++++++|.|+ |.+|...++.+...|++|++++++++..+.+.++ .+. ...+ |..+.+.+..+ .++
T Consensus 9 ~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 88 (256)
T PRK06124 9 LAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEHGR 88 (256)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence 36889999998 8999999998888999999999987766554332 332 1122 44444433221 257
Q ss_pred ccEEEEcCCC
Q 022313 245 LDFIIDTASG 254 (299)
Q Consensus 245 ~d~v~d~~g~ 254 (299)
+|.++.+.|.
T Consensus 89 id~vi~~ag~ 98 (256)
T PRK06124 89 LDILVNNVGA 98 (256)
T ss_pred CCEEEECCCC
Confidence 8999998884
No 352
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated
Probab=96.02 E-value=0.043 Score=49.49 Aligned_cols=77 Identities=26% Similarity=0.374 Sum_probs=50.8
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCch---------------------HHHHH---HHhcCCCE-E--Ee
Q 022313 180 PGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTS---------------------KKEEA---LSLLGADK-F--VV 231 (299)
Q Consensus 180 ~g~~vlI~G~g~~G~~a~~~a~~~g~-~v~~~~~~~~---------------------~~~~~---~~~~g~~~-v--~~ 231 (299)
...+|+|+|+|++|..+++.+...|. ++++++.+.- +.+.+ .++++.+. + +.
T Consensus 23 ~~~~VlVvG~GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~v~~~~ 102 (339)
T PRK07688 23 REKHVLIIGAGALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVRVEAIV 102 (339)
T ss_pred cCCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcEEEEEe
Confidence 44679999999999999999999998 8888887531 11111 13333211 1 11
Q ss_pred -CCCHHHHHHhcCCccEEEEcCCCch
Q 022313 232 -SSDLEQMKALGKSLDFIIDTASGDH 256 (299)
Q Consensus 232 -~~~~~~~~~~~~~~d~v~d~~g~~~ 256 (299)
.-+.+.+.++-+++|+|++++.+..
T Consensus 103 ~~~~~~~~~~~~~~~DlVid~~Dn~~ 128 (339)
T PRK07688 103 QDVTAEELEELVTGVDLIIDATDNFE 128 (339)
T ss_pred ccCCHHHHHHHHcCCCEEEEcCCCHH
Confidence 1123445555678999999999876
No 353
>PRK06181 short chain dehydrogenase; Provisional
Probab=96.01 E-value=0.037 Score=47.66 Aligned_cols=74 Identities=19% Similarity=0.249 Sum_probs=51.1
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhc---CCCE-E--EeCCCHHHHHHh-------cCCcc
Q 022313 181 GKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL---GADK-F--VVSSDLEQMKAL-------GKSLD 246 (299)
Q Consensus 181 g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~---g~~~-v--~~~~~~~~~~~~-------~~~~d 246 (299)
++++||.|+ |.+|...++.+...|++|++++++++..+.+.+++ +... + .|..+.+.+.++ .+++|
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 80 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGID 80 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 357999988 99999999999899999999999977665543332 3221 1 233344333222 25789
Q ss_pred EEEEcCCC
Q 022313 247 FIIDTASG 254 (299)
Q Consensus 247 ~v~d~~g~ 254 (299)
+++.+.|.
T Consensus 81 ~vi~~ag~ 88 (263)
T PRK06181 81 ILVNNAGI 88 (263)
T ss_pred EEEECCCc
Confidence 99999874
No 354
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=96.01 E-value=0.055 Score=48.42 Aligned_cols=75 Identities=19% Similarity=0.173 Sum_probs=52.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCC--CeEEEEeCCchHHHHHHHhcCC--CEE--EeCCCHHHHHHhcCCccEEEEcC
Q 022313 180 PGKSLGVIGL-GGLGHMAVKFGKAFG--LNVTVLSTSTSKKEEALSLLGA--DKF--VVSSDLEQMKALGKSLDFIIDTA 252 (299)
Q Consensus 180 ~g~~vlI~G~-g~~G~~a~~~a~~~g--~~v~~~~~~~~~~~~~~~~~g~--~~v--~~~~~~~~~~~~~~~~d~v~d~~ 252 (299)
++++|||.|+ |.+|...++.+...| .+|++++++......+.+.+.. -.+ .|..+.+.+.+.-.++|+||.++
T Consensus 3 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~~iD~Vih~A 82 (324)
T TIGR03589 3 NNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDKERLTRALRGVDYVVHAA 82 (324)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHhcCCEEEECc
Confidence 4688999987 999999988887765 5898888876654444333321 112 25556666665556799999988
Q ss_pred CC
Q 022313 253 SG 254 (299)
Q Consensus 253 g~ 254 (299)
+.
T Consensus 83 g~ 84 (324)
T TIGR03589 83 AL 84 (324)
T ss_pred cc
Confidence 74
No 355
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=96.01 E-value=0.054 Score=42.99 Aligned_cols=73 Identities=30% Similarity=0.378 Sum_probs=49.0
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHCCC-eEEEEeCC--chHHHHHHHhc---CCC-EEE--eCCCHHHHHHh-------cCC
Q 022313 182 KSLGVIGL-GGLGHMAVKFGKAFGL-NVTVLSTS--TSKKEEALSLL---GAD-KFV--VSSDLEQMKAL-------GKS 244 (299)
Q Consensus 182 ~~vlI~G~-g~~G~~a~~~a~~~g~-~v~~~~~~--~~~~~~~~~~~---g~~-~v~--~~~~~~~~~~~-------~~~ 244 (299)
++++|.|+ +++|...++.+...|+ +|+++.++ .++.+.+.+++ +.. .++ |..+.+.++++ .+.
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP 80 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 47899997 8999999998888877 78888888 45444443333 321 122 33444443332 368
Q ss_pred ccEEEEcCCC
Q 022313 245 LDFIIDTASG 254 (299)
Q Consensus 245 ~d~v~d~~g~ 254 (299)
+|++|.+.|.
T Consensus 81 ld~li~~ag~ 90 (167)
T PF00106_consen 81 LDILINNAGI 90 (167)
T ss_dssp ESEEEEECSC
T ss_pred cccccccccc
Confidence 9999999984
No 356
>PRK13403 ketol-acid reductoisomerase; Provisional
Probab=96.00 E-value=0.084 Score=46.91 Aligned_cols=89 Identities=17% Similarity=0.215 Sum_probs=64.9
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEEeCCCHHHHHHhcCCccEEEEcCCCch--
Q 022313 179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDH-- 256 (299)
Q Consensus 179 ~~g~~vlI~G~g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~v~d~~g~~~-- 256 (299)
-++++|.|+|-|.+|...++.++.+|.+|++..+.....+.+ +..|.. +. .+.++....|+|+-++..+.
T Consensus 14 LkgKtVGIIG~GsIG~amA~nL~d~G~~ViV~~r~~~s~~~A-~~~G~~-v~------sl~Eaak~ADVV~llLPd~~t~ 85 (335)
T PRK13403 14 LQGKTVAVIGYGSQGHAQAQNLRDSGVEVVVGVRPGKSFEVA-KADGFE-VM------SVSEAVRTAQVVQMLLPDEQQA 85 (335)
T ss_pred hCcCEEEEEeEcHHHHHHHHHHHHCcCEEEEEECcchhhHHH-HHcCCE-EC------CHHHHHhcCCEEEEeCCChHHH
Confidence 478999999999999999999999999999987764443444 455653 21 34456677899999887643
Q ss_pred -hH-HHHHHhcccCcEEEEEc
Q 022313 257 -PF-DAYMSLLKVAGVYVLVG 275 (299)
Q Consensus 257 -~~-~~~~~~l~~~G~~v~~g 275 (299)
.+ ...+..|+++..++...
T Consensus 86 ~V~~~eil~~MK~GaiL~f~h 106 (335)
T PRK13403 86 HVYKAEVEENLREGQMLLFSH 106 (335)
T ss_pred HHHHHHHHhcCCCCCEEEECC
Confidence 22 34667788887776663
No 357
>PLN02823 spermine synthase
Probab=95.99 E-value=0.13 Score=46.33 Aligned_cols=94 Identities=14% Similarity=0.220 Sum_probs=61.4
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCchHHHHHHHhcCCC---------EEEeCCCHHHHHHhcCCccEEE
Q 022313 180 PGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGAD---------KFVVSSDLEQMKALGKSLDFII 249 (299)
Q Consensus 180 ~g~~vlI~G~g~~G~~a~~~a~~~g~-~v~~~~~~~~~~~~~~~~~g~~---------~v~~~~~~~~~~~~~~~~d~v~ 249 (299)
..++|||+|+|. |..+..+++..+. +|+++..+++-.+.+++-++.. +++..+....+++..+.||+||
T Consensus 103 ~pk~VLiiGgG~-G~~~re~l~~~~~~~v~~VEiD~~vv~lar~~~~~~~~~~~dprv~v~~~Da~~~L~~~~~~yDvIi 181 (336)
T PLN02823 103 NPKTVFIMGGGE-GSTAREVLRHKTVEKVVMCDIDQEVVDFCRKHLTVNREAFCDKRLELIINDARAELEKRDEKFDVII 181 (336)
T ss_pred CCCEEEEECCCc-hHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhcccccccccCCceEEEEChhHHHHhhCCCCccEEE
Confidence 457899998863 4555667776554 8999999988888775555421 1222222344444457899997
Q ss_pred EcCCCc------------hhHH-HHHHhcccCcEEEEE
Q 022313 250 DTASGD------------HPFD-AYMSLLKVAGVYVLV 274 (299)
Q Consensus 250 d~~g~~------------~~~~-~~~~~l~~~G~~v~~ 274 (299)
--+..+ ..++ .+.+.|+++|.++.-
T Consensus 182 ~D~~dp~~~~~~~~Lyt~eF~~~~~~~~L~p~Gvlv~q 219 (336)
T PLN02823 182 GDLADPVEGGPCYQLYTKSFYERIVKPKLNPGGIFVTQ 219 (336)
T ss_pred ecCCCccccCcchhhccHHHHHHHHHHhcCCCcEEEEe
Confidence 653221 2345 678899999998754
No 358
>PRK06701 short chain dehydrogenase; Provisional
Probab=95.99 E-value=0.21 Score=43.86 Aligned_cols=99 Identities=18% Similarity=0.139 Sum_probs=62.9
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchH-HHHHH---HhcCCCE-E--EeCCCHHHHHHh-------cC
Q 022313 179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSK-KEEAL---SLLGADK-F--VVSSDLEQMKAL-------GK 243 (299)
Q Consensus 179 ~~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~-~~~~~---~~~g~~~-v--~~~~~~~~~~~~-------~~ 243 (299)
-+++++||.|+ |.+|...++.+...|++|+++.++.+. .+.+. +..+.+. + .|..+.+.+.++ .+
T Consensus 44 ~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~~ 123 (290)
T PRK06701 44 LKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRELG 123 (290)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 45788999998 899999999988899999999887532 22221 2223222 2 233344333322 25
Q ss_pred CccEEEEcCCCch--------------------------hHHHHHHhcccCcEEEEEcCC
Q 022313 244 SLDFIIDTASGDH--------------------------PFDAYMSLLKVAGVYVLVGFP 277 (299)
Q Consensus 244 ~~d~v~d~~g~~~--------------------------~~~~~~~~l~~~G~~v~~g~~ 277 (299)
++|+++.++|... ..+.+++.+++.|+++.++..
T Consensus 124 ~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~ 183 (290)
T PRK06701 124 RLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSI 183 (290)
T ss_pred CCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecc
Confidence 7899999887410 122334455667899988765
No 359
>PRK12747 short chain dehydrogenase; Provisional
Probab=95.97 E-value=0.099 Score=44.68 Aligned_cols=98 Identities=20% Similarity=0.229 Sum_probs=61.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEe-CCchHHHHHHHhc---CCCE-E--EeCCCHHHHH----Hh------
Q 022313 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLS-TSTSKKEEALSLL---GADK-F--VVSSDLEQMK----AL------ 241 (299)
Q Consensus 180 ~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~-~~~~~~~~~~~~~---g~~~-v--~~~~~~~~~~----~~------ 241 (299)
.+++++|.|+ +++|...++.+...|++|++.. +.+++.+...+++ +... . .+..+.+.+. ++
T Consensus 3 ~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (252)
T PRK12747 3 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQN 82 (252)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhhh
Confidence 4688999987 8999999999999999998875 4444444332222 3211 1 1222322211 11
Q ss_pred --c-CCccEEEEcCCCc-------------------------hhHHHHHHhcccCcEEEEEcCC
Q 022313 242 --G-KSLDFIIDTASGD-------------------------HPFDAYMSLLKVAGVYVLVGFP 277 (299)
Q Consensus 242 --~-~~~d~v~d~~g~~-------------------------~~~~~~~~~l~~~G~~v~~g~~ 277 (299)
+ +++|+++.++|.. ...+.+++.++..|+++.++..
T Consensus 83 ~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~ 146 (252)
T PRK12747 83 RTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSA 146 (252)
T ss_pred hcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCc
Confidence 1 3799999998831 0122355666777999998876
No 360
>PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=95.95 E-value=0.026 Score=55.60 Aligned_cols=76 Identities=18% Similarity=0.191 Sum_probs=53.0
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCch---------------------HHHHHHHhcCCCEEEeCCC--H
Q 022313 179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTS---------------------KKEEALSLLGADKFVVSSD--L 235 (299)
Q Consensus 179 ~~g~~vlI~G~g~~G~~a~~~a~~~g~~v~~~~~~~~---------------------~~~~~~~~~g~~~v~~~~~--~ 235 (299)
..+++|+|+|+|+.|+.++..+...|.+|+++.+.+. +.+.+ +++|.+...+..- .
T Consensus 325 ~~~~~VaIIGaGpAGLsaA~~L~~~G~~V~V~E~~~~~GG~l~~gip~~~l~~~~~~~~~~~~-~~~Gv~~~~~~~v~~~ 403 (654)
T PRK12769 325 KSDKRVAIIGAGPAGLACADVLARNGVAVTVYDRHPEIGGLLTFGIPAFKLDKSLLARRREIF-SAMGIEFELNCEVGKD 403 (654)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCceeeecCCCccCCHHHHHHHHHHH-HHCCeEEECCCEeCCc
Confidence 3678999999999999999999999999999987543 23334 5677654333211 0
Q ss_pred HHHHHhcCCccEEEEcCCCc
Q 022313 236 EQMKALGKSLDFIIDTASGD 255 (299)
Q Consensus 236 ~~~~~~~~~~d~v~d~~g~~ 255 (299)
-.+..+..+||.||.++|..
T Consensus 404 i~~~~~~~~~DavilAtGa~ 423 (654)
T PRK12769 404 ISLESLLEDYDAVFVGVGTY 423 (654)
T ss_pred CCHHHHHhcCCEEEEeCCCC
Confidence 01222335799999998853
No 361
>PRK14982 acyl-ACP reductase; Provisional
Probab=95.93 E-value=0.067 Score=48.08 Aligned_cols=93 Identities=18% Similarity=0.301 Sum_probs=66.6
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHH-CCC-eEEEEeCCchHHHHHHHhcCCCEEEeCCCHHHHHHhcCCccEEEEcCCCc
Q 022313 179 QPGKSLGVIGL-GGLGHMAVKFGKA-FGL-NVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGD 255 (299)
Q Consensus 179 ~~g~~vlI~G~-g~~G~~a~~~a~~-~g~-~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~v~d~~g~~ 255 (299)
-.+++|+|+|+ |.+|..+++.+.. .+. +++++.++.++...+.++++...+. .+.+.-...|+|+-+++.+
T Consensus 153 l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~~~i~------~l~~~l~~aDiVv~~ts~~ 226 (340)
T PRK14982 153 LSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGGGKIL------SLEEALPEADIVVWVASMP 226 (340)
T ss_pred cCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhccccHH------hHHHHHccCCEEEECCcCC
Confidence 47789999998 8999988888864 454 8999999888888876666422221 2334446799999988875
Q ss_pred hhHHHHHHhcccCcEEEEEcCC
Q 022313 256 HPFDAYMSLLKVAGVYVLVGFP 277 (299)
Q Consensus 256 ~~~~~~~~~l~~~G~~v~~g~~ 277 (299)
.....-...+++.-.+++++.+
T Consensus 227 ~~~~I~~~~l~~~~~viDiAvP 248 (340)
T PRK14982 227 KGVEIDPETLKKPCLMIDGGYP 248 (340)
T ss_pred cCCcCCHHHhCCCeEEEEecCC
Confidence 4322222456777888899988
No 362
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.91 E-value=0.086 Score=45.18 Aligned_cols=74 Identities=22% Similarity=0.189 Sum_probs=49.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCch-HHHHHHHhcCCCEE-EeCCCHHHHHHh-------cCCccEEE
Q 022313 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTS-KKEEALSLLGADKF-VVSSDLEQMKAL-------GKSLDFII 249 (299)
Q Consensus 180 ~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~-~~~~~~~~~g~~~v-~~~~~~~~~~~~-------~~~~d~v~ 249 (299)
.+++++|.|+ |++|...++.+...|++|+++.+..+ ..+.+ ++.+...+ .|..+.+.+.++ .+++|+++
T Consensus 6 ~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li 84 (255)
T PRK06463 6 KGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKEL-REKGVFTIKCDVGNRDQVKKSKEVVEKEFGRVDVLV 84 (255)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHH-HhCCCeEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 4688999988 99999999999989999988765543 33334 23333222 244454443332 25799999
Q ss_pred EcCCC
Q 022313 250 DTASG 254 (299)
Q Consensus 250 d~~g~ 254 (299)
.+.|.
T Consensus 85 ~~ag~ 89 (255)
T PRK06463 85 NNAGI 89 (255)
T ss_pred ECCCc
Confidence 99874
No 363
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP. Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....
Probab=95.91 E-value=0.11 Score=40.15 Aligned_cols=93 Identities=22% Similarity=0.268 Sum_probs=56.2
Q ss_pred CCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCchHH-------------------HHH---HHhcC-CCEEEeCC---
Q 022313 181 GKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKK-------------------EEA---LSLLG-ADKFVVSS--- 233 (299)
Q Consensus 181 g~~vlI~G~g~~G~~a~~~a~~~g~-~v~~~~~~~~~~-------------------~~~---~~~~g-~~~v~~~~--- 233 (299)
..+|+|+|+|++|...+..+.+.|. ++++++...-+. +.+ .+++. ..++....
T Consensus 2 ~~~v~iiG~G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~~ 81 (135)
T PF00899_consen 2 NKRVLIIGAGGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEKI 81 (135)
T ss_dssp T-EEEEESTSHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESHC
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeeccc
Confidence 4689999999999999999998998 788887542211 111 12222 22222111
Q ss_pred CHHHHHHhcCCccEEEEcCCCchhHHHHHHhcccCcEEEE
Q 022313 234 DLEQMKALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVL 273 (299)
Q Consensus 234 ~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~ 273 (299)
+.+...++-+++|+|++|...........+..+..+.-+.
T Consensus 82 ~~~~~~~~~~~~d~vi~~~d~~~~~~~l~~~~~~~~~p~i 121 (135)
T PF00899_consen 82 DEENIEELLKDYDIVIDCVDSLAARLLLNEICREYGIPFI 121 (135)
T ss_dssp SHHHHHHHHHTSSEEEEESSSHHHHHHHHHHHHHTT-EEE
T ss_pred ccccccccccCCCEEEEecCCHHHHHHHHHHHHHcCCCEE
Confidence 2233444446899999999987744455555666654443
No 364
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=95.91 E-value=0.089 Score=45.39 Aligned_cols=75 Identities=17% Similarity=0.239 Sum_probs=52.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhc---CCCE---EEeCCCHHHHHHh-------cCCc
Q 022313 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL---GADK---FVVSSDLEQMKAL-------GKSL 245 (299)
Q Consensus 180 ~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~-------~~~~ 245 (299)
++++++|.|+ +++|...+..+...|++|+++.+++++.+.+.+.+ +... ..|..+.+.+.++ .+++
T Consensus 9 ~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 88 (265)
T PRK07097 9 KGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVGVI 88 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence 5688999988 89999998888889999999999887766553333 3221 1244444443322 2578
Q ss_pred cEEEEcCCC
Q 022313 246 DFIIDTASG 254 (299)
Q Consensus 246 d~v~d~~g~ 254 (299)
|+++.+.|.
T Consensus 89 d~li~~ag~ 97 (265)
T PRK07097 89 DILVNNAGI 97 (265)
T ss_pred CEEEECCCC
Confidence 999999884
No 365
>PF07991 IlvN: Acetohydroxy acid isomeroreductase, catalytic domain; InterPro: IPR013116 Acetohydroxy acid isomeroreductase catalyses the conversion of acetohydroxy acids into dihydroxy valerates. This reaction is the second in the synthetic pathway of the essential branched side chain amino acids valine and isoleucine.; GO: 0004455 ketol-acid reductoisomerase activity, 0008652 cellular amino acid biosynthetic process, 0055114 oxidation-reduction process; PDB: 1QMG_A 1YVE_J 3FR8_B 3FR7_A 1NP3_C 1YRL_C.
Probab=95.91 E-value=0.059 Score=42.78 Aligned_cols=89 Identities=22% Similarity=0.239 Sum_probs=59.5
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEEeCCCHHHHHHhcCCccEEEEcCCCch---
Q 022313 180 PGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDH--- 256 (299)
Q Consensus 180 ~g~~vlI~G~g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~v~d~~g~~~--- 256 (299)
++++|.|+|-|.-|.+-++=++.+|.+|++..+...+....+++-|.+.. .+.+.....|+|+-.+....
T Consensus 3 ~~k~IAViGyGsQG~a~AlNLrDSG~~V~Vglr~~s~s~~~A~~~Gf~v~-------~~~eAv~~aDvV~~L~PD~~q~~ 75 (165)
T PF07991_consen 3 KGKTIAVIGYGSQGHAHALNLRDSGVNVIVGLREGSASWEKAKADGFEVM-------SVAEAVKKADVVMLLLPDEVQPE 75 (165)
T ss_dssp CTSEEEEES-SHHHHHHHHHHHHCC-EEEEEE-TTCHHHHHHHHTT-ECC-------EHHHHHHC-SEEEE-S-HHHHHH
T ss_pred CCCEEEEECCChHHHHHHHHHHhCCCCEEEEecCCCcCHHHHHHCCCeec-------cHHHHHhhCCEEEEeCChHHHHH
Confidence 57899999999999999999999999999999988855444478786432 23344567899998887532
Q ss_pred hH-HHHHHhcccCcEEEEEc
Q 022313 257 PF-DAYMSLLKVAGVYVLVG 275 (299)
Q Consensus 257 ~~-~~~~~~l~~~G~~v~~g 275 (299)
++ +.....|+++-.+++..
T Consensus 76 vy~~~I~p~l~~G~~L~fah 95 (165)
T PF07991_consen 76 VYEEEIAPNLKPGATLVFAH 95 (165)
T ss_dssp HHHHHHHHHS-TT-EEEESS
T ss_pred HHHHHHHhhCCCCCEEEeCC
Confidence 23 55566888888777653
No 366
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=95.90 E-value=0.061 Score=44.68 Aligned_cols=34 Identities=21% Similarity=0.364 Sum_probs=30.0
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCC
Q 022313 180 PGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTS 213 (299)
Q Consensus 180 ~g~~vlI~G~g~~G~~a~~~a~~~g~-~v~~~~~~ 213 (299)
+..+|+|+|+|++|...++.+.+.|. ++++++.+
T Consensus 20 ~~~~V~IvG~GglGs~ia~~La~~Gvg~i~lvD~D 54 (200)
T TIGR02354 20 EQATVAICGLGGLGSNVAINLARAGIGKLILVDFD 54 (200)
T ss_pred hCCcEEEECcCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 44779999999999999999999998 78888877
No 367
>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.88 E-value=0.085 Score=45.93 Aligned_cols=95 Identities=21% Similarity=0.227 Sum_probs=71.4
Q ss_pred ccchhhHHHHHHhhhccCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEEeCCCHHHH
Q 022313 160 PLLCAGITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQM 238 (299)
Q Consensus 160 ~~~~~~~ta~~al~~~~~~~~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 238 (299)
.+||...+.+..++....--.|+++.|+|. ..+|.-...++...+++|++..+....+
T Consensus 137 ~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~~VGkPla~lL~~~~AtVt~chs~T~~l--------------------- 195 (278)
T PRK14172 137 FLPCTPNSVITLIKSLNIDIEGKEVVVIGRSNIVGKPVAQLLLNENATVTICHSKTKNL--------------------- 195 (278)
T ss_pred CcCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCH---------------------
Confidence 457776776766766544368999999997 7899999999999999998876443222
Q ss_pred HHhcCCccEEEEcCCCchhHHHHHHhcccCcEEEEEcCC
Q 022313 239 KALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP 277 (299)
Q Consensus 239 ~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~ 277 (299)
.+..+..|+++-++|.+..+. -++++++..++++|..
T Consensus 196 ~~~~~~ADIvIsAvGkp~~i~--~~~ik~gavVIDvGin 232 (278)
T PRK14172 196 KEVCKKADILVVAIGRPKFID--EEYVKEGAIVIDVGTS 232 (278)
T ss_pred HHHHhhCCEEEEcCCCcCccC--HHHcCCCcEEEEeecc
Confidence 223356899999999887433 4569999999999866
No 368
>PRK07791 short chain dehydrogenase; Provisional
Probab=95.88 E-value=0.091 Score=46.10 Aligned_cols=76 Identities=22% Similarity=0.246 Sum_probs=51.1
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCc---------hHHHHHHHhc---CCCE-E--EeCCCHHHHHHh-
Q 022313 179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTST---------SKKEEALSLL---GADK-F--VVSSDLEQMKAL- 241 (299)
Q Consensus 179 ~~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~---------~~~~~~~~~~---g~~~-v--~~~~~~~~~~~~- 241 (299)
-+++++||.|+ +++|...++.+...|++|++++++. ++.+.+.+++ +... . .|..+.+.+.++
T Consensus 4 l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~ 83 (286)
T PRK07791 4 LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLV 83 (286)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHH
Confidence 46789999988 8999999999988999999987764 4444433333 3221 1 234444333322
Q ss_pred ------cCCccEEEEcCCC
Q 022313 242 ------GKSLDFIIDTASG 254 (299)
Q Consensus 242 ------~~~~d~v~d~~g~ 254 (299)
.+++|+++++.|.
T Consensus 84 ~~~~~~~g~id~lv~nAG~ 102 (286)
T PRK07791 84 DAAVETFGGLDVLVNNAGI 102 (286)
T ss_pred HHHHHhcCCCCEEEECCCC
Confidence 2679999999884
No 369
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=95.88 E-value=0.046 Score=46.49 Aligned_cols=75 Identities=23% Similarity=0.215 Sum_probs=51.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHh---cCCC-EEE--eCCCHHHHHHh-------cCCc
Q 022313 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL---LGAD-KFV--VSSDLEQMKAL-------GKSL 245 (299)
Q Consensus 180 ~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~---~g~~-~v~--~~~~~~~~~~~-------~~~~ 245 (299)
.++++||.|+ |.+|...+..+...|++|++++++.++...+.++ .+.. .++ +..+.+.+.+. .+.+
T Consensus 5 ~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 84 (251)
T PRK12826 5 EGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGRL 84 (251)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 4678999997 9999999999888899999999986655443222 2221 122 34444443332 2478
Q ss_pred cEEEEcCCC
Q 022313 246 DFIIDTASG 254 (299)
Q Consensus 246 d~v~d~~g~ 254 (299)
|.++.+.+.
T Consensus 85 d~vi~~ag~ 93 (251)
T PRK12826 85 DILVANAGI 93 (251)
T ss_pred CEEEECCCC
Confidence 999998864
No 370
>PRK08251 short chain dehydrogenase; Provisional
Probab=95.87 E-value=0.067 Score=45.55 Aligned_cols=73 Identities=23% Similarity=0.243 Sum_probs=50.7
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhc-----CCC-EE--EeCCCHHHHHH----h---cCC
Q 022313 181 GKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL-----GAD-KF--VVSSDLEQMKA----L---GKS 244 (299)
Q Consensus 181 g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~-----g~~-~v--~~~~~~~~~~~----~---~~~ 244 (299)
+++++|.|+ |++|...++.+...|++|+++++++++.+.+.+.+ +.. ++ .|..+.+.+.+ + .++
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 81 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGG 81 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 468999997 99999999888888999999999987766553322 111 12 24444443322 1 257
Q ss_pred ccEEEEcCC
Q 022313 245 LDFIIDTAS 253 (299)
Q Consensus 245 ~d~v~d~~g 253 (299)
.|+++.+.|
T Consensus 82 id~vi~~ag 90 (248)
T PRK08251 82 LDRVIVNAG 90 (248)
T ss_pred CCEEEECCC
Confidence 999999987
No 371
>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB. This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).
Probab=95.86 E-value=0.096 Score=44.84 Aligned_cols=78 Identities=24% Similarity=0.341 Sum_probs=49.9
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCchHHHHH----------------------HHhcCCC-EEE--e-C
Q 022313 180 PGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEA----------------------LSLLGAD-KFV--V-S 232 (299)
Q Consensus 180 ~g~~vlI~G~g~~G~~a~~~a~~~g~-~v~~~~~~~~~~~~~----------------------~~~~g~~-~v~--~-~ 232 (299)
++.+|+|+|+|++|..+++.+.+.|. ++++++.+.-+...+ .++++.+ .+. + .
T Consensus 23 ~~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~inp~v~i~~~~~~ 102 (240)
T TIGR02355 23 KASRVLIVGLGGLGCAASQYLAAAGVGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQINPHIAINPINAK 102 (240)
T ss_pred hCCcEEEECcCHHHHHHHHHHHHcCCCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHHCCCcEEEEEecc
Confidence 34779999999999999999999998 777776543222111 1222211 111 1 1
Q ss_pred CCHHHHHHhcCCccEEEEcCCCchh
Q 022313 233 SDLEQMKALGKSLDFIIDTASGDHP 257 (299)
Q Consensus 233 ~~~~~~~~~~~~~d~v~d~~g~~~~ 257 (299)
-+.+.+.++-.++|+|+||+.+...
T Consensus 103 i~~~~~~~~~~~~DlVvd~~D~~~~ 127 (240)
T TIGR02355 103 LDDAELAALIAEHDIVVDCTDNVEV 127 (240)
T ss_pred CCHHHHHHHhhcCCEEEEcCCCHHH
Confidence 1223444555789999999998773
No 372
>cd01487 E1_ThiF_like E1_ThiF_like. Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=95.85 E-value=0.074 Score=43.14 Aligned_cols=92 Identities=17% Similarity=0.201 Sum_probs=53.8
Q ss_pred EEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCch------------------HHHHHH---HhcC-CCEEEe---CCCHH
Q 022313 183 SLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTS------------------KKEEAL---SLLG-ADKFVV---SSDLE 236 (299)
Q Consensus 183 ~vlI~G~g~~G~~a~~~a~~~g~-~v~~~~~~~~------------------~~~~~~---~~~g-~~~v~~---~~~~~ 236 (299)
+|+|+|+|++|...++.+.+.|. ++++++.+.- +.+.++ +++. ..++.. .-+.+
T Consensus 1 ~VlViG~GglGs~ia~~La~~Gvg~i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~lnp~v~i~~~~~~~~~~ 80 (174)
T cd01487 1 KVGIAGAGGLGSNIAVLLARSGVGNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREINPFVKIEAINIKIDEN 80 (174)
T ss_pred CEEEECcCHHHHHHHHHHHHcCCCeEEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHHHHCCCCEEEEEEeecChh
Confidence 48999999999999999999998 6888887641 111111 2222 112211 11123
Q ss_pred HHHHhcCCccEEEEcCCCchhHHHHHHh-cccCcEEEEE
Q 022313 237 QMKALGKSLDFIIDTASGDHPFDAYMSL-LKVAGVYVLV 274 (299)
Q Consensus 237 ~~~~~~~~~d~v~d~~g~~~~~~~~~~~-l~~~G~~v~~ 274 (299)
...++-+++|+|++|+.+........+. .+..+.-+..
T Consensus 81 ~~~~~l~~~DlVi~~~d~~~~r~~i~~~~~~~~~ip~i~ 119 (174)
T cd01487 81 NLEGLFGDCDIVVEAFDNAETKAMLAESLLGNKNKPVVC 119 (174)
T ss_pred hHHHHhcCCCEEEECCCCHHHHHHHHHHHHHHCCCCEEE
Confidence 3344457899999998887633334343 3332443333
No 373
>PRK08703 short chain dehydrogenase; Provisional
Probab=95.84 E-value=0.066 Score=45.37 Aligned_cols=44 Identities=27% Similarity=0.324 Sum_probs=37.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHh
Q 022313 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL 223 (299)
Q Consensus 180 ~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~ 223 (299)
++++++|.|+ |++|...++.+...|++|+++++++++.+.+.++
T Consensus 5 ~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~ 49 (239)
T PRK08703 5 SDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDA 49 (239)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHH
Confidence 4678999998 9999999999998999999999998876655433
No 374
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=95.82 E-value=0.085 Score=47.00 Aligned_cols=74 Identities=27% Similarity=0.357 Sum_probs=53.0
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHCC-CeEEEEeCCchHHHHHHHhcCC--C--EE--EeCCCHHHHHHh-------cCCc
Q 022313 181 GKSLGVIGL-GGLGHMAVKFGKAFG-LNVTVLSTSTSKKEEALSLLGA--D--KF--VVSSDLEQMKAL-------GKSL 245 (299)
Q Consensus 181 g~~vlI~G~-g~~G~~a~~~a~~~g-~~v~~~~~~~~~~~~~~~~~g~--~--~v--~~~~~~~~~~~~-------~~~~ 245 (299)
+++++|.|+ +++|...++.+...| ++|++++++.++.+.+.+++.. . ++ .|..+.+.+.++ .+++
T Consensus 3 ~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i 82 (314)
T TIGR01289 3 KPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRPL 82 (314)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence 568999998 899999998888889 8999999998877766555531 1 12 244444433322 2579
Q ss_pred cEEEEcCCC
Q 022313 246 DFIIDTASG 254 (299)
Q Consensus 246 d~v~d~~g~ 254 (299)
|+++.++|.
T Consensus 83 D~lI~nAG~ 91 (314)
T TIGR01289 83 DALVCNAAV 91 (314)
T ss_pred CEEEECCCc
Confidence 999998873
No 375
>PRK07904 short chain dehydrogenase; Provisional
Probab=95.82 E-value=0.051 Score=46.74 Aligned_cols=76 Identities=14% Similarity=0.171 Sum_probs=50.3
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCC-CeEEEEeCCchH-HHHHHHhc---CC--CEEE--eCCCHHH----HHHh--c
Q 022313 179 QPGKSLGVIGL-GGLGHMAVKFGKAFG-LNVTVLSTSTSK-KEEALSLL---GA--DKFV--VSSDLEQ----MKAL--G 242 (299)
Q Consensus 179 ~~g~~vlI~G~-g~~G~~a~~~a~~~g-~~v~~~~~~~~~-~~~~~~~~---g~--~~v~--~~~~~~~----~~~~--~ 242 (299)
-.++++||.|+ |++|...++.+...| ++|++++|+++. .+.+.+++ +. -+++ |..+.+. ++++ .
T Consensus 6 ~~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~ 85 (253)
T PRK07904 6 GNPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFAG 85 (253)
T ss_pred CCCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHhc
Confidence 56788999998 899999998877664 899999998775 55443333 32 1222 3333333 2222 1
Q ss_pred CCccEEEEcCCC
Q 022313 243 KSLDFIIDTASG 254 (299)
Q Consensus 243 ~~~d~v~d~~g~ 254 (299)
++.|+++.+.|.
T Consensus 86 g~id~li~~ag~ 97 (253)
T PRK07904 86 GDVDVAIVAFGL 97 (253)
T ss_pred CCCCEEEEeeec
Confidence 579999987764
No 376
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate. This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....
Probab=95.82 E-value=0.025 Score=45.02 Aligned_cols=88 Identities=17% Similarity=0.231 Sum_probs=59.2
Q ss_pred EEEEEcCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcC-----C-----CEEEeCCCHHHHHHhcCCccEEEEcC
Q 022313 183 SLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLG-----A-----DKFVVSSDLEQMKALGKSLDFIIDTA 252 (299)
Q Consensus 183 ~vlI~G~g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g-----~-----~~v~~~~~~~~~~~~~~~~d~v~d~~ 252 (299)
+|.|+|+|..|.+.+..+...|.+|.+..++++..+.+.+.-. . +.+.... .+++.-++.|+++-++
T Consensus 1 KI~ViGaG~~G~AlA~~la~~g~~V~l~~~~~~~~~~i~~~~~n~~~~~~~~l~~~i~~t~---dl~~a~~~ad~Iiiav 77 (157)
T PF01210_consen 1 KIAVIGAGNWGTALAALLADNGHEVTLWGRDEEQIEEINETRQNPKYLPGIKLPENIKATT---DLEEALEDADIIIIAV 77 (157)
T ss_dssp EEEEESSSHHHHHHHHHHHHCTEEEEEETSCHHHHHHHHHHTSETTTSTTSBEETTEEEES---SHHHHHTT-SEEEE-S
T ss_pred CEEEECcCHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhCCCCCCCCCcccCccccccc---CHHHHhCcccEEEecc
Confidence 5889999999999999999999999999999888777743221 1 1111122 2333447899999999
Q ss_pred CCchhHHHHHHhccc---CcEEEEE
Q 022313 253 SGDHPFDAYMSLLKV---AGVYVLV 274 (299)
Q Consensus 253 g~~~~~~~~~~~l~~---~G~~v~~ 274 (299)
.... .+..++.+++ .+..+..
T Consensus 78 Ps~~-~~~~~~~l~~~l~~~~~ii~ 101 (157)
T PF01210_consen 78 PSQA-HREVLEQLAPYLKKGQIIIS 101 (157)
T ss_dssp -GGG-HHHHHHHHTTTSHTT-EEEE
T ss_pred cHHH-HHHHHHHHhhccCCCCEEEE
Confidence 9876 6777776666 3554444
No 377
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.82 E-value=0.092 Score=45.50 Aligned_cols=74 Identities=16% Similarity=0.189 Sum_probs=48.6
Q ss_pred CCCEEEEEcCC---hHHHHHHHHHHHCCCeEEEEeCCc---hHHHHHHHhcCCCEE--EeCCCHHHHHHh-------cCC
Q 022313 180 PGKSLGVIGLG---GLGHMAVKFGKAFGLNVTVLSTST---SKKEEALSLLGADKF--VVSSDLEQMKAL-------GKS 244 (299)
Q Consensus 180 ~g~~vlI~G~g---~~G~~a~~~a~~~g~~v~~~~~~~---~~~~~~~~~~g~~~v--~~~~~~~~~~~~-------~~~ 244 (299)
++++++|.|++ ++|.+.++.+...|++|++..+++ +..+++.++.+.... .|-.+.+.+..+ .+.
T Consensus 5 ~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 84 (262)
T PRK07984 5 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVWPK 84 (262)
T ss_pred CCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhcCC
Confidence 56889999873 799999999988999999888763 223333222332222 244444444332 256
Q ss_pred ccEEEEcCC
Q 022313 245 LDFIIDTAS 253 (299)
Q Consensus 245 ~d~v~d~~g 253 (299)
+|++++++|
T Consensus 85 iD~linnAg 93 (262)
T PRK07984 85 FDGFVHSIG 93 (262)
T ss_pred CCEEEECCc
Confidence 899999997
No 378
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional
Probab=95.81 E-value=0.074 Score=52.06 Aligned_cols=92 Identities=13% Similarity=0.202 Sum_probs=68.5
Q ss_pred CCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEE-eCCCHHHHHHhc-CCccEEEEcCCCchhH
Q 022313 181 GKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFV-VSSDLEQMKALG-KSLDFIIDTASGDHPF 258 (299)
Q Consensus 181 g~~vlI~G~g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~-~~~~~~~~~~~~-~~~d~v~d~~g~~~~~ 258 (299)
.++|+|.|.|.+|+..++.++..|.++++++.++++.+.+ ++.|...+. |..+.+.+++.+ ..+|.++-++++...-
T Consensus 400 ~~~vII~G~Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~-~~~g~~v~~GDat~~~~L~~agi~~A~~vvv~~~d~~~n 478 (621)
T PRK03562 400 QPRVIIAGFGRFGQIVGRLLLSSGVKMTVLDHDPDHIETL-RKFGMKVFYGDATRMDLLESAGAAKAEVLINAIDDPQTS 478 (621)
T ss_pred cCcEEEEecChHHHHHHHHHHhCCCCEEEEECCHHHHHHH-HhcCCeEEEEeCCCHHHHHhcCCCcCCEEEEEeCCHHHH
Confidence 3679999999999999999999999999999999999988 577764443 555666666654 7899999999886522
Q ss_pred HH---HHHhcccCcEEEE
Q 022313 259 DA---YMSLLKVAGVYVL 273 (299)
Q Consensus 259 ~~---~~~~l~~~G~~v~ 273 (299)
.. ..+.+.|+-+++.
T Consensus 479 ~~i~~~ar~~~p~~~iia 496 (621)
T PRK03562 479 LQLVELVKEHFPHLQIIA 496 (621)
T ss_pred HHHHHHHHHhCCCCeEEE
Confidence 22 2344445545443
No 379
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.81 E-value=0.086 Score=45.54 Aligned_cols=75 Identities=11% Similarity=0.138 Sum_probs=49.0
Q ss_pred CCCEEEEEcC---ChHHHHHHHHHHHCCCeEEEEeCCch---HHHHHHHhcCCCEE--EeCCCHHHHHHh-------cCC
Q 022313 180 PGKSLGVIGL---GGLGHMAVKFGKAFGLNVTVLSTSTS---KKEEALSLLGADKF--VVSSDLEQMKAL-------GKS 244 (299)
Q Consensus 180 ~g~~vlI~G~---g~~G~~a~~~a~~~g~~v~~~~~~~~---~~~~~~~~~g~~~v--~~~~~~~~~~~~-------~~~ 244 (299)
+++++||.|+ +++|.+.++.+...|++|++..+.+. ..+++.++.+.... .|-.+.+.+.++ .++
T Consensus 5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 84 (261)
T PRK08690 5 QGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHWDG 84 (261)
T ss_pred CCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 5678999984 58999999999999999998866532 23333233342222 244444443322 267
Q ss_pred ccEEEEcCCC
Q 022313 245 LDFIIDTASG 254 (299)
Q Consensus 245 ~d~v~d~~g~ 254 (299)
+|++++++|-
T Consensus 85 iD~lVnnAG~ 94 (261)
T PRK08690 85 LDGLVHSIGF 94 (261)
T ss_pred CcEEEECCcc
Confidence 9999999874
No 380
>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.81 E-value=0.093 Score=45.79 Aligned_cols=96 Identities=16% Similarity=0.193 Sum_probs=72.3
Q ss_pred cccchhhHHHHHHhhhccCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEEeCCCHHH
Q 022313 159 APLLCAGITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQ 237 (299)
Q Consensus 159 a~~~~~~~ta~~al~~~~~~~~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~ 237 (299)
..+||...+....++....--.|+++.|+|. ..+|.-...++...++.|++.......++
T Consensus 137 ~~~PcTp~avi~ll~~y~i~l~Gk~vvViGrS~iVGkPla~lL~~~~atVt~chs~T~~l~------------------- 197 (284)
T PRK14177 137 TYLPCTPYGMVLLLKEYGIDVTGKNAVVVGRSPILGKPMAMLLTEMNATVTLCHSKTQNLP------------------- 197 (284)
T ss_pred CCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHH-------------------
Confidence 3456666666666665544468999999997 78999999999999999988764433222
Q ss_pred HHHhcCCccEEEEcCCCchhHHHHHHhcccCcEEEEEcCC
Q 022313 238 MKALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP 277 (299)
Q Consensus 238 ~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~ 277 (299)
+..+..|+++-++|.+..+ --++++++..++++|..
T Consensus 198 --~~~~~ADIvIsAvGk~~~i--~~~~ik~gavVIDvGin 233 (284)
T PRK14177 198 --SIVRQADIIVGAVGKPEFI--KADWISEGAVLLDAGYN 233 (284)
T ss_pred --HHHhhCCEEEEeCCCcCcc--CHHHcCCCCEEEEecCc
Confidence 2336689999999988733 36789999999999975
No 381
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=95.81 E-value=0.078 Score=46.25 Aligned_cols=76 Identities=22% Similarity=0.259 Sum_probs=54.2
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcC---CC--E----EEeCCCHHHHHH--------
Q 022313 179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLG---AD--K----FVVSSDLEQMKA-------- 240 (299)
Q Consensus 179 ~~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g---~~--~----v~~~~~~~~~~~-------- 240 (299)
-+++++||.|+ .++|.+.+..+...|++|+++.+++++.++.++++. .. + ..+..+.+..++
T Consensus 6 l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~~ 85 (270)
T KOG0725|consen 6 LAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVEK 85 (270)
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHHH
Confidence 46788999987 799999999999999999999999998776654432 21 1 112333322222
Q ss_pred hcCCccEEEEcCCC
Q 022313 241 LGKSLDFIIDTASG 254 (299)
Q Consensus 241 ~~~~~d~v~d~~g~ 254 (299)
..++.|+.+++.|.
T Consensus 86 ~~GkidiLvnnag~ 99 (270)
T KOG0725|consen 86 FFGKIDILVNNAGA 99 (270)
T ss_pred hCCCCCEEEEcCCc
Confidence 23679999998884
No 382
>PRK06198 short chain dehydrogenase; Provisional
Probab=95.80 E-value=0.067 Score=45.89 Aligned_cols=76 Identities=25% Similarity=0.243 Sum_probs=52.6
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCe-EEEEeCCchHHHHHHH---hcCCCE---EEeCCCHHHHHHh-------cC
Q 022313 179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLN-VTVLSTSTSKKEEALS---LLGADK---FVVSSDLEQMKAL-------GK 243 (299)
Q Consensus 179 ~~g~~vlI~G~-g~~G~~a~~~a~~~g~~-v~~~~~~~~~~~~~~~---~~g~~~---v~~~~~~~~~~~~-------~~ 243 (299)
-++++++|.|+ |++|...++.+...|++ |++++++++..+...+ +.+... ..|..+.+.+.++ .+
T Consensus 4 ~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 83 (260)
T PRK06198 4 LDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAFG 83 (260)
T ss_pred CCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 35688999998 89999999999999998 9999988766553322 233221 2244444443332 25
Q ss_pred CccEEEEcCCC
Q 022313 244 SLDFIIDTASG 254 (299)
Q Consensus 244 ~~d~v~d~~g~ 254 (299)
++|+++.+.|.
T Consensus 84 ~id~li~~ag~ 94 (260)
T PRK06198 84 RLDALVNAAGL 94 (260)
T ss_pred CCCEEEECCCc
Confidence 79999999984
No 383
>PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional
Probab=95.79 E-value=0.11 Score=44.86 Aligned_cols=93 Identities=20% Similarity=0.285 Sum_probs=61.7
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhc---CCC---EEEeCCCHHHHH-HhcCCccEEEEc
Q 022313 179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL---GAD---KFVVSSDLEQMK-ALGKSLDFIIDT 251 (299)
Q Consensus 179 ~~g~~vlI~G~g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~v~~~~~~~~~~-~~~~~~d~v~d~ 251 (299)
.++.+||=+|+|. |..+..+++. +.+|++++.+++..+.+.+.. |.. .++. .+...+. ...+.||+|+..
T Consensus 43 ~~~~~vLDiGcG~-G~~a~~la~~-g~~v~~vD~s~~~l~~a~~~~~~~g~~~~v~~~~-~d~~~l~~~~~~~fD~V~~~ 119 (255)
T PRK11036 43 PRPLRVLDAGGGE-GQTAIKLAEL-GHQVILCDLSAEMIQRAKQAAEAKGVSDNMQFIH-CAAQDIAQHLETPVDLILFH 119 (255)
T ss_pred CCCCEEEEeCCCc-hHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHhcCCccceEEEE-cCHHHHhhhcCCCCCEEEeh
Confidence 4567888888864 6777777775 789999999998877764433 321 2222 2222232 234689999853
Q ss_pred CC-----C-chhHHHHHHhcccCcEEEEE
Q 022313 252 AS-----G-DHPFDAYMSLLKVAGVYVLV 274 (299)
Q Consensus 252 ~g-----~-~~~~~~~~~~l~~~G~~v~~ 274 (299)
.. . ...+..+.+.|+|+|+++.+
T Consensus 120 ~vl~~~~~~~~~l~~~~~~LkpgG~l~i~ 148 (255)
T PRK11036 120 AVLEWVADPKSVLQTLWSVLRPGGALSLM 148 (255)
T ss_pred hHHHhhCCHHHHHHHHHHHcCCCeEEEEE
Confidence 22 2 23477889999999999765
No 384
>PRK05562 precorrin-2 dehydrogenase; Provisional
Probab=95.79 E-value=0.28 Score=41.34 Aligned_cols=92 Identities=16% Similarity=0.026 Sum_probs=59.3
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCch-HHHHHHHhcCCCEEEeCC-CHHHHHHhcCCccEEEEcCCCch
Q 022313 179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTS-KKEEALSLLGADKFVVSS-DLEQMKALGKSLDFIIDTASGDH 256 (299)
Q Consensus 179 ~~g~~vlI~G~g~~G~~a~~~a~~~g~~v~~~~~~~~-~~~~~~~~~g~~~v~~~~-~~~~~~~~~~~~d~v~d~~g~~~ 256 (299)
-++.+|||+|+|.++.-=+..+...|++|+++...-. +.+.+ .+.|.-..+... ++.. -.++++||-+++.+.
T Consensus 23 ~~~~~VLVVGGG~VA~RK~~~Ll~~gA~VtVVap~i~~el~~l-~~~~~i~~~~r~~~~~d----l~g~~LViaATdD~~ 97 (223)
T PRK05562 23 SNKIKVLIIGGGKAAFIKGKTFLKKGCYVYILSKKFSKEFLDL-KKYGNLKLIKGNYDKEF----IKDKHLIVIATDDEK 97 (223)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCCCHHHHHH-HhCCCEEEEeCCCChHH----hCCCcEEEECCCCHH
Confidence 4678999999999999888888889999999976532 33333 233422222211 1122 267999999999888
Q ss_pred hHHHHHHhcccCcEEEEEc
Q 022313 257 PFDAYMSLLKVAGVYVLVG 275 (299)
Q Consensus 257 ~~~~~~~~l~~~G~~v~~g 275 (299)
.-..+....+..+.++...
T Consensus 98 vN~~I~~~a~~~~~lvn~v 116 (223)
T PRK05562 98 LNNKIRKHCDRLYKLYIDC 116 (223)
T ss_pred HHHHHHHHHHHcCCeEEEc
Confidence 3333444444546555543
No 385
>PRK06522 2-dehydropantoate 2-reductase; Reviewed
Probab=95.79 E-value=0.058 Score=47.61 Aligned_cols=89 Identities=15% Similarity=0.167 Sum_probs=58.3
Q ss_pred EEEEEcCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCE----E-EeCCCHHHHHHhcCCccEEEEcCCCchh
Q 022313 183 SLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADK----F-VVSSDLEQMKALGKSLDFIIDTASGDHP 257 (299)
Q Consensus 183 ~vlI~G~g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~----v-~~~~~~~~~~~~~~~~d~v~d~~g~~~~ 257 (299)
+|+|+|+|.+|...+..+...|.+|++++++++..+.+. +-|... . ..........+. +.+|+||-++....
T Consensus 2 ~I~IiG~G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~-~~~d~vila~k~~~- 78 (304)
T PRK06522 2 KIAILGAGAIGGLFGAALAQAGHDVTLVARRGAHLDALN-ENGLRLEDGEITVPVLAADDPAEL-GPQDLVILAVKAYQ- 78 (304)
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECChHHHHHHH-HcCCcccCCceeecccCCCChhHc-CCCCEEEEeccccc-
Confidence 589999999999888888888999999999877777763 435321 0 000000112223 78999999998765
Q ss_pred HHHHHHhcc----cCcEEEEE
Q 022313 258 FDAYMSLLK----VAGVYVLV 274 (299)
Q Consensus 258 ~~~~~~~l~----~~G~~v~~ 274 (299)
...+++.++ ++..++.+
T Consensus 79 ~~~~~~~l~~~l~~~~~iv~~ 99 (304)
T PRK06522 79 LPAALPSLAPLLGPDTPVLFL 99 (304)
T ss_pred HHHHHHHHhhhcCCCCEEEEe
Confidence 455555444 34456554
No 386
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=95.79 E-value=0.077 Score=45.51 Aligned_cols=99 Identities=17% Similarity=0.126 Sum_probs=62.7
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhc-CCCEE-EeCCC-HHHHHH-hcCCccEEEEcCC
Q 022313 179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL-GADKF-VVSSD-LEQMKA-LGKSLDFIIDTAS 253 (299)
Q Consensus 179 ~~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~-g~~~v-~~~~~-~~~~~~-~~~~~d~v~d~~g 253 (299)
.++++|||+|+ |.+|...++.+...|++|+++.|++++........ +.+.+ .|..+ .+.+.+ +..++|+||.+.|
T Consensus 15 ~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~~~~l~~~~~~~~d~vi~~~g 94 (251)
T PLN00141 15 VKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLPQDPSLQIVRADVTEGSDKLVEAIGDDSDAVICATG 94 (251)
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcccCCceEEEEeeCCCCHHHHHHHhhcCCCEEEECCC
Confidence 44678999998 99999999988888999999999877654432211 12222 23333 233333 3358999998877
Q ss_pred Cch-------------hHHHHHHhcccC--cEEEEEcCC
Q 022313 254 GDH-------------PFDAYMSLLKVA--GVYVLVGFP 277 (299)
Q Consensus 254 ~~~-------------~~~~~~~~l~~~--G~~v~~g~~ 277 (299)
... ....+++.+... ++++.++..
T Consensus 95 ~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~ 133 (251)
T PLN00141 95 FRRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSI 133 (251)
T ss_pred CCcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEccc
Confidence 421 123344444443 578887654
No 387
>PRK06914 short chain dehydrogenase; Provisional
Probab=95.78 E-value=0.06 Score=46.85 Aligned_cols=75 Identities=21% Similarity=0.193 Sum_probs=51.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHh---cCC---CEE--EeCCCHHHHH---Hh---cCC
Q 022313 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL---LGA---DKF--VVSSDLEQMK---AL---GKS 244 (299)
Q Consensus 180 ~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~---~g~---~~v--~~~~~~~~~~---~~---~~~ 244 (299)
+++++||.|+ |.+|...+..+...|++|++++++++..+...+. .+. -++ .|..+.+.+. +. .++
T Consensus 2 ~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~ 81 (280)
T PRK06914 2 NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHNFQLVLKEIGR 81 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHHHHHHHHhcCC
Confidence 3578999998 9999999999888999999999987766554322 221 112 2444444332 22 257
Q ss_pred ccEEEEcCCC
Q 022313 245 LDFIIDTASG 254 (299)
Q Consensus 245 ~d~v~d~~g~ 254 (299)
+|+++.+.|.
T Consensus 82 id~vv~~ag~ 91 (280)
T PRK06914 82 IDLLVNNAGY 91 (280)
T ss_pred eeEEEECCcc
Confidence 8999999874
No 388
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.78 E-value=0.088 Score=45.34 Aligned_cols=75 Identities=16% Similarity=0.206 Sum_probs=51.1
Q ss_pred CCCEEEEEcC---ChHHHHHHHHHHHCCCeEEEEeCCc--hHHHHHHHhcCCC-EE--EeCCCHHHHHHh-------cCC
Q 022313 180 PGKSLGVIGL---GGLGHMAVKFGKAFGLNVTVLSTST--SKKEEALSLLGAD-KF--VVSSDLEQMKAL-------GKS 244 (299)
Q Consensus 180 ~g~~vlI~G~---g~~G~~a~~~a~~~g~~v~~~~~~~--~~~~~~~~~~g~~-~v--~~~~~~~~~~~~-------~~~ 244 (299)
.+++++|.|+ +++|.+.++.+...|++|++++++. +..+.+.++++.. .. .|..+.+.++++ .++
T Consensus 6 ~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~ 85 (256)
T PRK07889 6 EGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLASLADRVREHVDG 85 (256)
T ss_pred cCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence 5678999985 6999999999888999999998764 3345554555421 11 244444443332 267
Q ss_pred ccEEEEcCCC
Q 022313 245 LDFIIDTASG 254 (299)
Q Consensus 245 ~d~v~d~~g~ 254 (299)
+|+++++.|.
T Consensus 86 iD~li~nAG~ 95 (256)
T PRK07889 86 LDGVVHSIGF 95 (256)
T ss_pred CcEEEEcccc
Confidence 9999998874
No 389
>COG0421 SpeE Spermidine synthase [Amino acid transport and metabolism]
Probab=95.77 E-value=0.17 Score=44.31 Aligned_cols=92 Identities=20% Similarity=0.308 Sum_probs=63.4
Q ss_pred CEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCchHHHHHHHhcCCC---------EEEeCCCHHHHHHhcCCccEEEEc
Q 022313 182 KSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGAD---------KFVVSSDLEQMKALGKSLDFIIDT 251 (299)
Q Consensus 182 ~~vlI~G~g~~G~~a~~~a~~~g~-~v~~~~~~~~~~~~~~~~~g~~---------~v~~~~~~~~~~~~~~~~d~v~d~ 251 (299)
++|||+|.|- |-.+-.++++... +++++..+++-.+.+++-++.. .++..+..+.+++...+||+|+--
T Consensus 78 k~VLiiGgGd-G~tlRevlkh~~ve~i~~VEID~~Vi~~ar~~l~~~~~~~~dpRv~i~i~Dg~~~v~~~~~~fDvIi~D 156 (282)
T COG0421 78 KRVLIIGGGD-GGTLREVLKHLPVERITMVEIDPAVIELARKYLPEPSGGADDPRVEIIIDDGVEFLRDCEEKFDVIIVD 156 (282)
T ss_pred CeEEEECCCc-cHHHHHHHhcCCcceEEEEEcCHHHHHHHHHhccCcccccCCCceEEEeccHHHHHHhCCCcCCEEEEc
Confidence 6999997653 4445566666644 8999999888888886666622 222233334555555689999754
Q ss_pred CCC----------chhHHHHHHhcccCcEEEEE
Q 022313 252 ASG----------DHPFDAYMSLLKVAGVYVLV 274 (299)
Q Consensus 252 ~g~----------~~~~~~~~~~l~~~G~~v~~ 274 (299)
+.. ...++.+.++|+++|.++.-
T Consensus 157 ~tdp~gp~~~Lft~eFy~~~~~~L~~~Gi~v~q 189 (282)
T COG0421 157 STDPVGPAEALFTEEFYEGCRRALKEDGIFVAQ 189 (282)
T ss_pred CCCCCCcccccCCHHHHHHHHHhcCCCcEEEEe
Confidence 443 34688899999999999877
No 390
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=95.77 E-value=0.06 Score=45.83 Aligned_cols=75 Identities=24% Similarity=0.230 Sum_probs=50.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCch-HHHHHHHhcCCC-EE--EeCCCHHHHHH-------hcCCccE
Q 022313 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTS-KKEEALSLLGAD-KF--VVSSDLEQMKA-------LGKSLDF 247 (299)
Q Consensus 180 ~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~-~~~~~~~~~g~~-~v--~~~~~~~~~~~-------~~~~~d~ 247 (299)
+++++||.|+ |++|...+..+...|++|++++++.. +.....++.+.. .+ .|..+.+.+.. ..+++|+
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 83 (248)
T TIGR01832 4 EGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFGHIDI 83 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 5789999998 89999999999999999999998652 222222344422 12 23444443322 1257999
Q ss_pred EEEcCCC
Q 022313 248 IIDTASG 254 (299)
Q Consensus 248 v~d~~g~ 254 (299)
++.+.|.
T Consensus 84 li~~ag~ 90 (248)
T TIGR01832 84 LVNNAGI 90 (248)
T ss_pred EEECCCC
Confidence 9998874
No 391
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.77 E-value=0.068 Score=46.15 Aligned_cols=75 Identities=21% Similarity=0.203 Sum_probs=49.9
Q ss_pred CCCEEEEEcC---ChHHHHHHHHHHHCCCeEEEEeCC---chHHHHHHHhcCCCEE--EeCCCHHHHHHh-------cCC
Q 022313 180 PGKSLGVIGL---GGLGHMAVKFGKAFGLNVTVLSTS---TSKKEEALSLLGADKF--VVSSDLEQMKAL-------GKS 244 (299)
Q Consensus 180 ~g~~vlI~G~---g~~G~~a~~~a~~~g~~v~~~~~~---~~~~~~~~~~~g~~~v--~~~~~~~~~~~~-------~~~ 244 (299)
+++++||.|+ +++|++.++.+...|++|+++.+. +++.+.+.++++.... .|-.+.+.+.++ .++
T Consensus 5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 84 (260)
T PRK06997 5 AGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQHWDG 84 (260)
T ss_pred CCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHHhCC
Confidence 5688999984 589999999888899999887543 3444444445553222 244444443322 267
Q ss_pred ccEEEEcCCC
Q 022313 245 LDFIIDTASG 254 (299)
Q Consensus 245 ~d~v~d~~g~ 254 (299)
+|+++++.|.
T Consensus 85 iD~lvnnAG~ 94 (260)
T PRK06997 85 LDGLVHSIGF 94 (260)
T ss_pred CcEEEEcccc
Confidence 9999998863
No 392
>PRK06046 alanine dehydrogenase; Validated
Probab=95.76 E-value=0.059 Score=48.37 Aligned_cols=101 Identities=21% Similarity=0.329 Sum_probs=67.7
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHH-CCC-eEEEEeCCchHHHHHHHhcC----CCEEEeCCCHHHHHHhcCCccEEEEcC
Q 022313 179 QPGKSLGVIGLGGLGHMAVKFGKA-FGL-NVTVLSTSTSKKEEALSLLG----ADKFVVSSDLEQMKALGKSLDFIIDTA 252 (299)
Q Consensus 179 ~~g~~vlI~G~g~~G~~a~~~a~~-~g~-~v~~~~~~~~~~~~~~~~~g----~~~v~~~~~~~~~~~~~~~~d~v~d~~ 252 (299)
+...++.|+|+|..|...+..+.. .+. ++.+.++++++.+.+.+++. ..... ..+. ++... .|+|+.|+
T Consensus 127 ~~~~~vgiiG~G~qa~~h~~al~~~~~i~~v~v~~r~~~~~~~~~~~~~~~~~~~v~~-~~~~---~~~l~-aDiVv~aT 201 (326)
T PRK06046 127 KDSKVVGIIGAGNQARTQLLALSEVFDLEEVRVYDRTKSSAEKFVERMSSVVGCDVTV-AEDI---EEACD-CDILVTTT 201 (326)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHhhCCceEEEEECCCHHHHHHHHHHHHhhcCceEEE-eCCH---HHHhh-CCEEEEec
Confidence 556789999999999888876663 455 78888999888877766553 22111 2222 22224 89999999
Q ss_pred CCchhHHHHHHhcccCcEEEEEcCC--CceeeChh
Q 022313 253 SGDHPFDAYMSLLKVAGVYVLVGFP--SKVKFSPA 285 (299)
Q Consensus 253 g~~~~~~~~~~~l~~~G~~v~~g~~--~~~~~~~~ 285 (299)
.....+ -..+.++++-.+..+|.. ....++..
T Consensus 202 ps~~P~-~~~~~l~~g~hV~~iGs~~p~~~El~~~ 235 (326)
T PRK06046 202 PSRKPV-VKAEWIKEGTHINAIGADAPGKQELDPE 235 (326)
T ss_pred CCCCcE-ecHHHcCCCCEEEecCCCCCccccCCHH
Confidence 875422 234567898888899976 44555544
No 393
>PRK06141 ornithine cyclodeaminase; Validated
Probab=95.75 E-value=0.19 Score=44.79 Aligned_cols=105 Identities=21% Similarity=0.156 Sum_probs=69.1
Q ss_pred ccCCCCCCEEEEEcCChHHHHHHHHHHH-CCC-eEEEEeCCchHHHHHHHhcCCC--EEEeCCCHHHHHHhcCCccEEEE
Q 022313 175 HKMNQPGKSLGVIGLGGLGHMAVKFGKA-FGL-NVTVLSTSTSKKEEALSLLGAD--KFVVSSDLEQMKALGKSLDFIID 250 (299)
Q Consensus 175 ~~~~~~g~~vlI~G~g~~G~~a~~~a~~-~g~-~v~~~~~~~~~~~~~~~~~g~~--~v~~~~~~~~~~~~~~~~d~v~d 250 (299)
... ...++++|+|+|..|...+..+.. .+. +|.+..|++++.+.+.+++... .+....+ ..+...+.|+|+.
T Consensus 120 La~-~~~~~v~iiG~G~~a~~~~~al~~~~~~~~V~V~~Rs~~~a~~~a~~~~~~g~~~~~~~~---~~~av~~aDIVi~ 195 (314)
T PRK06141 120 LAR-KDASRLLVVGTGRLASLLALAHASVRPIKQVRVWGRDPAKAEALAAELRAQGFDAEVVTD---LEAAVRQADIISC 195 (314)
T ss_pred hCC-CCCceEEEECCcHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEeCC---HHHHHhcCCEEEE
Confidence 444 567899999999999998865443 454 8999999999888876665321 1222222 2233367999999
Q ss_pred cCCCchhHHHHHHhcccCcEEEEEcCC--CceeeCh
Q 022313 251 TASGDHPFDAYMSLLKVAGVYVLVGFP--SKVKFSP 284 (299)
Q Consensus 251 ~~g~~~~~~~~~~~l~~~G~~v~~g~~--~~~~~~~ 284 (299)
+++....+- -.+.++++-.+..+|.. ....++.
T Consensus 196 aT~s~~pvl-~~~~l~~g~~i~~ig~~~~~~~El~~ 230 (314)
T PRK06141 196 ATLSTEPLV-RGEWLKPGTHLDLVGNFTPDMRECDD 230 (314)
T ss_pred eeCCCCCEe-cHHHcCCCCEEEeeCCCCcccccCCH
Confidence 888753211 12567888877777766 3444444
No 394
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=95.74 E-value=0.056 Score=46.42 Aligned_cols=75 Identities=20% Similarity=0.217 Sum_probs=50.6
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHH---HhcCCC-EE--EeCCCHHHHHHh-------cCC
Q 022313 179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEAL---SLLGAD-KF--VVSSDLEQMKAL-------GKS 244 (299)
Q Consensus 179 ~~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~---~~~g~~-~v--~~~~~~~~~~~~-------~~~ 244 (299)
-.++++||.|+ |++|...++.+...|++|+++.++ ++.+.+. ++.+.. .+ .|..+.+.+.++ .++
T Consensus 13 l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~ 91 (258)
T PRK06935 13 LDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFGK 91 (258)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 35789999998 899999999999999999999887 3333332 233422 12 234444433322 257
Q ss_pred ccEEEEcCCC
Q 022313 245 LDFIIDTASG 254 (299)
Q Consensus 245 ~d~v~d~~g~ 254 (299)
+|+++.+.|.
T Consensus 92 id~li~~ag~ 101 (258)
T PRK06935 92 IDILVNNAGT 101 (258)
T ss_pred CCEEEECCCC
Confidence 8999998873
No 395
>PRK06179 short chain dehydrogenase; Provisional
Probab=95.74 E-value=0.061 Score=46.51 Aligned_cols=72 Identities=18% Similarity=0.190 Sum_probs=50.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCE-EEeCCCHHHHHHh-------cCCccEEEE
Q 022313 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADK-FVVSSDLEQMKAL-------GKSLDFIID 250 (299)
Q Consensus 180 ~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~~-------~~~~d~v~d 250 (299)
.+++++|.|+ |++|...++.+...|++|++++++.++.+.. -+... ..|..+.+.+.++ .+++|+++.
T Consensus 3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~---~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~li~ 79 (270)
T PRK06179 3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAPI---PGVELLELDVTDDASVQAAVDEVIARAGRIDVLVN 79 (270)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhcccc---CCCeeEEeecCCHHHHHHHHHHHHHhCCCCCEEEE
Confidence 3568999988 9999999999888999999999986554322 12222 2244455444332 257899999
Q ss_pred cCCC
Q 022313 251 TASG 254 (299)
Q Consensus 251 ~~g~ 254 (299)
+.|.
T Consensus 80 ~ag~ 83 (270)
T PRK06179 80 NAGV 83 (270)
T ss_pred CCCC
Confidence 9984
No 396
>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1.1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....
Probab=95.73 E-value=0.047 Score=42.86 Aligned_cols=90 Identities=18% Similarity=0.169 Sum_probs=57.4
Q ss_pred EEEEcCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEEeC-------CC-HHHHHHhcCCccEEEEcCCCc
Q 022313 184 LGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVS-------SD-LEQMKALGKSLDFIIDTASGD 255 (299)
Q Consensus 184 vlI~G~g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~-------~~-~~~~~~~~~~~d~v~d~~g~~ 255 (299)
|+|+|+|++|.+.+..++..|.+|.++.+.+ +.+.+ ++.|..-.... .. ........+.+|+||-|+-..
T Consensus 1 I~I~G~GaiG~~~a~~L~~~g~~V~l~~r~~-~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~viv~vKa~ 78 (151)
T PF02558_consen 1 ILIIGAGAIGSLYAARLAQAGHDVTLVSRSP-RLEAI-KEQGLTITGPDGDETVQPPIVISAPSADAGPYDLVIVAVKAY 78 (151)
T ss_dssp EEEESTSHHHHHHHHHHHHTTCEEEEEESHH-HHHHH-HHHCEEEEETTEEEEEEEEEEESSHGHHHSTESEEEE-SSGG
T ss_pred CEEECcCHHHHHHHHHHHHCCCceEEEEccc-cHHhh-hheeEEEEecccceecccccccCcchhccCCCcEEEEEeccc
Confidence 6889999999998888888999999999988 66665 45452111111 00 000112347899999999875
Q ss_pred h---hHHHHHHhcccCcEEEEEc
Q 022313 256 H---PFDAYMSLLKVAGVYVLVG 275 (299)
Q Consensus 256 ~---~~~~~~~~l~~~G~~v~~g 275 (299)
. .++.+.+.+.++..++.+-
T Consensus 79 ~~~~~l~~l~~~~~~~t~iv~~q 101 (151)
T PF02558_consen 79 QLEQALQSLKPYLDPNTTIVSLQ 101 (151)
T ss_dssp GHHHHHHHHCTGEETTEEEEEES
T ss_pred chHHHHHHHhhccCCCcEEEEEe
Confidence 5 2333444555556666663
No 397
>PRK12937 short chain dehydrogenase; Provisional
Probab=95.73 E-value=0.27 Score=41.58 Aligned_cols=99 Identities=18% Similarity=0.155 Sum_probs=62.3
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchH-HHHHH---HhcCCC-EEE--eCCCHHHHHHh-------cC
Q 022313 179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSK-KEEAL---SLLGAD-KFV--VSSDLEQMKAL-------GK 243 (299)
Q Consensus 179 ~~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~-~~~~~---~~~g~~-~v~--~~~~~~~~~~~-------~~ 243 (299)
.++++++|.|+ |++|...++.+...|++++++.++... .+.+. ++.+.. .++ +..+.+.+.+. .+
T Consensus 3 ~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 82 (245)
T PRK12937 3 LSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFG 82 (245)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 35688999987 999999999999999998887765432 22222 223321 122 33344333222 25
Q ss_pred CccEEEEcCCCch-------------------------hHHHHHHhcccCcEEEEEcCC
Q 022313 244 SLDFIIDTASGDH-------------------------PFDAYMSLLKVAGVYVLVGFP 277 (299)
Q Consensus 244 ~~d~v~d~~g~~~-------------------------~~~~~~~~l~~~G~~v~~g~~ 277 (299)
++|+++.+.|... ..+.+++.++.+|+++.++..
T Consensus 83 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~ 141 (245)
T PRK12937 83 RIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTS 141 (245)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeec
Confidence 7999999888410 123344555677899988755
No 398
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=95.73 E-value=0.089 Score=47.59 Aligned_cols=76 Identities=20% Similarity=0.156 Sum_probs=53.6
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhc--CC-CEEE--eCCCHHHHHHhcCCccEEEEcC
Q 022313 179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL--GA-DKFV--VSSDLEQMKALGKSLDFIIDTA 252 (299)
Q Consensus 179 ~~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~--g~-~~v~--~~~~~~~~~~~~~~~d~v~d~~ 252 (299)
..+.+|||.|+ |.+|...++.+...|.+|++++++.+..+.+.+.+ +. -.++ +..+.+.+.++-.++|+||.++
T Consensus 8 ~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~A 87 (353)
T PLN02896 8 SATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAVKGCDGVFHVA 87 (353)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHHHHHHHcCCCEEEECC
Confidence 57789999997 99999999999989999999988766554443332 11 1122 3344555555556789999988
Q ss_pred CC
Q 022313 253 SG 254 (299)
Q Consensus 253 g~ 254 (299)
+.
T Consensus 88 ~~ 89 (353)
T PLN02896 88 AS 89 (353)
T ss_pred cc
Confidence 74
No 399
>PRK07402 precorrin-6B methylase; Provisional
Probab=95.73 E-value=0.3 Score=40.24 Aligned_cols=100 Identities=19% Similarity=0.168 Sum_probs=61.5
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHC-CCeEEEEeCCchHHHHHHH---hcCCC--EEEeCCCHHHHHHhcCCccEEEE
Q 022313 177 MNQPGKSLGVIGLGGLGHMAVKFGKAF-GLNVTVLSTSTSKKEEALS---LLGAD--KFVVSSDLEQMKALGKSLDFIID 250 (299)
Q Consensus 177 ~~~~g~~vlI~G~g~~G~~a~~~a~~~-g~~v~~~~~~~~~~~~~~~---~~g~~--~v~~~~~~~~~~~~~~~~d~v~d 250 (299)
.++++++||=+|+|. |..++.+++.. +.+|++++.+++..+.+.+ +++.+ .++..+..+.+..+...+|.++-
T Consensus 37 ~~~~~~~VLDiG~G~-G~~~~~la~~~~~~~V~~vD~s~~~~~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~d~v~~ 115 (196)
T PRK07402 37 RLEPDSVLWDIGAGT-GTIPVEAGLLCPKGRVIAIERDEEVVNLIRRNCDRFGVKNVEVIEGSAPECLAQLAPAPDRVCI 115 (196)
T ss_pred CCCCCCEEEEeCCCC-CHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCCeEEEECchHHHHhhCCCCCCEEEE
Confidence 347888888888753 44555556544 4699999999887776643 34533 23333333333334334455443
Q ss_pred cCCC--chhHHHHHHhcccCcEEEEEcCC
Q 022313 251 TASG--DHPFDAYMSLLKVAGVYVLVGFP 277 (299)
Q Consensus 251 ~~g~--~~~~~~~~~~l~~~G~~v~~g~~ 277 (299)
..+. ...++.+.+.|+++|+++.....
T Consensus 116 ~~~~~~~~~l~~~~~~LkpgG~li~~~~~ 144 (196)
T PRK07402 116 EGGRPIKEILQAVWQYLKPGGRLVATASS 144 (196)
T ss_pred ECCcCHHHHHHHHHHhcCCCeEEEEEeec
Confidence 3332 24578888999999999887544
No 400
>COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis]
Probab=95.73 E-value=0.14 Score=44.93 Aligned_cols=98 Identities=21% Similarity=0.284 Sum_probs=62.7
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCchHHHHHHHhc---CCCEEEeCCCHHHHHHh-cCCccEEEEcC
Q 022313 178 NQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLL---GADKFVVSSDLEQMKAL-GKSLDFIIDTA 252 (299)
Q Consensus 178 ~~~g~~vlI~G~g~~G~~a~~~a~~~g~-~v~~~~~~~~~~~~~~~~~---g~~~v~~~~~~~~~~~~-~~~~d~v~d~~ 252 (299)
++++++||=+|+|+ |.+++..++ +|+ +|+.++-++...+.+++.. +.+......-....... .+.||+|+-++
T Consensus 160 ~~~g~~vlDvGcGS-GILaIAa~k-LGA~~v~g~DiDp~AV~aa~eNa~~N~v~~~~~~~~~~~~~~~~~~~~DvIVANI 237 (300)
T COG2264 160 LKKGKTVLDVGCGS-GILAIAAAK-LGAKKVVGVDIDPQAVEAARENARLNGVELLVQAKGFLLLEVPENGPFDVIVANI 237 (300)
T ss_pred hcCCCEEEEecCCh-hHHHHHHHH-cCCceEEEecCCHHHHHHHHHHHHHcCCchhhhcccccchhhcccCcccEEEehh
Confidence 46899998889864 667776666 476 7999999887766654322 22210000000011112 26899999877
Q ss_pred CCch---hHHHHHHhcccCcEEEEEcCC
Q 022313 253 SGDH---PFDAYMSLLKVAGVYVLVGFP 277 (299)
Q Consensus 253 g~~~---~~~~~~~~l~~~G~~v~~g~~ 277 (299)
=... ......+.++++|++++.|-.
T Consensus 238 LA~vl~~La~~~~~~lkpgg~lIlSGIl 265 (300)
T COG2264 238 LAEVLVELAPDIKRLLKPGGRLILSGIL 265 (300)
T ss_pred hHHHHHHHHHHHHHHcCCCceEEEEeeh
Confidence 4432 355667899999999999977
No 401
>PRK12480 D-lactate dehydrogenase; Provisional
Probab=95.73 E-value=0.082 Score=47.53 Aligned_cols=85 Identities=20% Similarity=0.248 Sum_probs=55.2
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEEeCCCHHHHHHhcCCccEEEEcCCCch---
Q 022313 180 PGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDH--- 256 (299)
Q Consensus 180 ~g~~vlI~G~g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~v~d~~g~~~--- 256 (299)
.|.+|.|+|.|.+|...++.++..|.+|++.+++++...... + . ...+.++....|+|+.++....
T Consensus 145 ~g~~VgIIG~G~IG~~vA~~L~~~G~~V~~~d~~~~~~~~~~-~--------~--~~~l~ell~~aDiVil~lP~t~~t~ 213 (330)
T PRK12480 145 KNMTVAIIGTGRIGAATAKIYAGFGATITAYDAYPNKDLDFL-T--------Y--KDSVKEAIKDADIISLHVPANKESY 213 (330)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCChhHhhhhh-h--------c--cCCHHHHHhcCCEEEEeCCCcHHHH
Confidence 667899999999999999999999999999998865432110 0 0 0112333455677776666432
Q ss_pred --hHHHHHHhcccCcEEEEEc
Q 022313 257 --PFDAYMSLLKVAGVYVLVG 275 (299)
Q Consensus 257 --~~~~~~~~l~~~G~~v~~g 275 (299)
.....+..++++..++.++
T Consensus 214 ~li~~~~l~~mk~gavlIN~a 234 (330)
T PRK12480 214 HLFDKAMFDHVKKGAILVNAA 234 (330)
T ss_pred HHHhHHHHhcCCCCcEEEEcC
Confidence 1233445666666666554
No 402
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=95.73 E-value=0.05 Score=48.53 Aligned_cols=76 Identities=22% Similarity=0.203 Sum_probs=51.9
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhc---CC---CEEE--eCCCHHHHHHhcCCccEEE
Q 022313 179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL---GA---DKFV--VSSDLEQMKALGKSLDFII 249 (299)
Q Consensus 179 ~~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~---g~---~~v~--~~~~~~~~~~~~~~~d~v~ 249 (299)
..++++||.|+ |.+|...+..+...|++|++++++.+..+...+.. +. -+++ |..+.+.+.++-.++|+|+
T Consensus 3 ~~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 82 (325)
T PLN02989 3 DGGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAIDGCETVF 82 (325)
T ss_pred CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHcCCCEEE
Confidence 35789999997 99999999999989999998887765443321111 11 1222 3444555555556799999
Q ss_pred EcCCC
Q 022313 250 DTASG 254 (299)
Q Consensus 250 d~~g~ 254 (299)
.+++.
T Consensus 83 h~A~~ 87 (325)
T PLN02989 83 HTASP 87 (325)
T ss_pred EeCCC
Confidence 99873
No 403
>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed
Probab=95.72 E-value=0.1 Score=49.40 Aligned_cols=73 Identities=12% Similarity=0.171 Sum_probs=53.3
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEEeCCCHHHHHHhcCCccEEEEcCCCch
Q 022313 179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDH 256 (299)
Q Consensus 179 ~~g~~vlI~G~g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~v~d~~g~~~ 256 (299)
..+++++|+|+|++|.+++..+...|++++++.++.++.+.+.++++.. .+... ...+ ...+|+|++|+....
T Consensus 330 ~~~k~vlIiGaGgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~~~~~~-~~~~~---~~~~-l~~~DiVInatP~g~ 402 (477)
T PRK09310 330 LNNQHVAIVGAGGAAKAIATTLARAGAELLIFNRTKAHAEALASRCQGK-AFPLE---SLPE-LHRIDIIINCLPPSV 402 (477)
T ss_pred cCCCEEEEEcCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccc-eechh---Hhcc-cCCCCEEEEcCCCCC
Confidence 4678899999999999999999999999999999888877775555432 12111 1111 257899999887543
No 404
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=95.72 E-value=0.075 Score=45.57 Aligned_cols=75 Identities=20% Similarity=0.272 Sum_probs=52.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHh---cCCC-EE--EeCCCHHHHHHh-------cCCc
Q 022313 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL---LGAD-KF--VVSSDLEQMKAL-------GKSL 245 (299)
Q Consensus 180 ~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~---~g~~-~v--~~~~~~~~~~~~-------~~~~ 245 (299)
.++++||.|+ +++|...+..+...|+++++++++.+..+.+.++ .+.+ ++ .|..+.+.+.++ .+++
T Consensus 10 ~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~ 89 (255)
T PRK06113 10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKLGKV 89 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 4789999988 8999999999989999999999887776554332 2322 12 244444443322 2578
Q ss_pred cEEEEcCCC
Q 022313 246 DFIIDTASG 254 (299)
Q Consensus 246 d~v~d~~g~ 254 (299)
|+++.+.|.
T Consensus 90 d~li~~ag~ 98 (255)
T PRK06113 90 DILVNNAGG 98 (255)
T ss_pred CEEEECCCC
Confidence 999999874
No 405
>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.71 E-value=0.12 Score=45.09 Aligned_cols=95 Identities=19% Similarity=0.204 Sum_probs=71.2
Q ss_pred ccchhhHHHHHHhhhccCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEEeCCCHHHH
Q 022313 160 PLLCAGITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQM 238 (299)
Q Consensus 160 ~~~~~~~ta~~al~~~~~~~~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 238 (299)
.+||...+....++....--.|+++.|+|. ..+|.-.+.++...+++|++....... +
T Consensus 137 ~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~atVt~chs~t~~---------------------l 195 (284)
T PRK14190 137 FLPCTPHGILELLKEYNIDISGKHVVVVGRSNIVGKPVGQLLLNENATVTYCHSKTKN---------------------L 195 (284)
T ss_pred CCCCCHHHHHHHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEeCCchh---------------------H
Confidence 467777777777766654468999999997 789999999999999999887543222 2
Q ss_pred HHhcCCccEEEEcCCCchhHHHHHHhcccCcEEEEEcCC
Q 022313 239 KALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP 277 (299)
Q Consensus 239 ~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~ 277 (299)
.+..+..|+|+-++|.+.. ---+.++++..++++|..
T Consensus 196 ~~~~~~ADIvI~AvG~p~~--i~~~~ik~gavVIDvGi~ 232 (284)
T PRK14190 196 AELTKQADILIVAVGKPKL--ITADMVKEGAVVIDVGVN 232 (284)
T ss_pred HHHHHhCCEEEEecCCCCc--CCHHHcCCCCEEEEeecc
Confidence 2334668899999988763 234678999999999876
No 406
>PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.70 E-value=0.11 Score=45.42 Aligned_cols=96 Identities=16% Similarity=0.138 Sum_probs=72.3
Q ss_pred cccchhhHHHHHHhhhccCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEEeCCCHHH
Q 022313 159 APLLCAGITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQ 237 (299)
Q Consensus 159 a~~~~~~~ta~~al~~~~~~~~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~ 237 (299)
..+||...+.+..++....--.|++++|+|. ..+|.=.+.++...+++|++..+....+.
T Consensus 136 ~~~PcTp~aii~lL~~y~i~l~Gk~vvViGrS~~VGkPla~lL~~~~ATVt~chs~T~dl~------------------- 196 (282)
T PRK14180 136 CLESCTPKGIMTMLREYGIKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFTTDLK------------------- 196 (282)
T ss_pred CcCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEEcCCCCCHH-------------------
Confidence 3567777777777766554468999999997 68999999999999999988765432222
Q ss_pred HHHhcCCccEEEEcCCCchhHHHHHHhcccCcEEEEEcCC
Q 022313 238 MKALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP 277 (299)
Q Consensus 238 ~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~ 277 (299)
+..+..|+++-++|.+..+. -++++++..++++|..
T Consensus 197 --~~~k~ADIvIsAvGkp~~i~--~~~vk~gavVIDvGin 232 (282)
T PRK14180 197 --SHTTKADILIVAVGKPNFIT--ADMVKEGAVVIDVGIN 232 (282)
T ss_pred --HHhhhcCEEEEccCCcCcCC--HHHcCCCcEEEEeccc
Confidence 22366899999999887433 4789999999999875
No 407
>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=95.68 E-value=0.072 Score=47.44 Aligned_cols=110 Identities=23% Similarity=0.213 Sum_probs=75.1
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcC----CCE----EEeCCCHHHHHHh-------c
Q 022313 179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLG----ADK----FVVSSDLEQMKAL-------G 242 (299)
Q Consensus 179 ~~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g----~~~----v~~~~~~~~~~~~-------~ 242 (299)
-++.+++|.|+ +++|..++..+...|++|++..|+.++.+++++++. ... -+|-.+.+.++.+ .
T Consensus 33 ~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~~~ 112 (314)
T KOG1208|consen 33 LSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKKKE 112 (314)
T ss_pred CCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHhcC
Confidence 45678889998 899999999999999999999999887777655543 222 2344455555443 3
Q ss_pred CCccEEEEcCCCc-----------------------hhHHHHHHhcccC--cEEEEEcCC-CceeeChhhhh
Q 022313 243 KSLDFIIDTASGD-----------------------HPFDAYMSLLKVA--GVYVLVGFP-SKVKFSPASLN 288 (299)
Q Consensus 243 ~~~d~v~d~~g~~-----------------------~~~~~~~~~l~~~--G~~v~~g~~-~~~~~~~~~l~ 288 (299)
.+.|+.++++|-- ...+.++..|+.. +|+|.+... ....+++..+.
T Consensus 113 ~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~~~~~~~~~l~ 184 (314)
T KOG1208|consen 113 GPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILGGGKIDLKDLS 184 (314)
T ss_pred CCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccccCccchhhcc
Confidence 6789999988820 1244555666655 799998776 32333444443
No 408
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=95.67 E-value=0.033 Score=42.20 Aligned_cols=91 Identities=16% Similarity=0.159 Sum_probs=55.5
Q ss_pred EEEEEcC-ChHHHHHHHHHHHCCC-eEEEE-eCCchHHHHHHHhcC----CCE-EEeCCCHHHHHHhcCCccEEEEcCCC
Q 022313 183 SLGVIGL-GGLGHMAVKFGKAFGL-NVTVL-STSTSKKEEALSLLG----ADK-FVVSSDLEQMKALGKSLDFIIDTASG 254 (299)
Q Consensus 183 ~vlI~G~-g~~G~~a~~~a~~~g~-~v~~~-~~~~~~~~~~~~~~g----~~~-v~~~~~~~~~~~~~~~~d~v~d~~g~ 254 (299)
+|.|+|+ |.+|...++++...-. +++.+ .++.+.-..+...++ ... .+...+.+. + ...|+||.|++.
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~Dvvf~a~~~ 76 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVEDADPEE---L-SDVDVVFLALPH 76 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEETSGHH---H-TTESEEEE-SCH
T ss_pred CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccceeEeecchhH---h-hcCCEEEecCch
Confidence 5889997 9999999999997543 54444 444412222212222 222 222212222 2 789999999998
Q ss_pred chhHHHHHHhcccCcEEEEEcCC
Q 022313 255 DHPFDAYMSLLKVAGVYVLVGFP 277 (299)
Q Consensus 255 ~~~~~~~~~~l~~~G~~v~~g~~ 277 (299)
....+..-..++.+-++++....
T Consensus 77 ~~~~~~~~~~~~~g~~ViD~s~~ 99 (121)
T PF01118_consen 77 GASKELAPKLLKAGIKVIDLSGD 99 (121)
T ss_dssp HHHHHHHHHHHHTTSEEEESSST
T ss_pred hHHHHHHHHHhhCCcEEEeCCHH
Confidence 77455555666777788888655
No 409
>PRK12921 2-dehydropantoate 2-reductase; Provisional
Probab=95.66 E-value=0.081 Score=46.79 Aligned_cols=89 Identities=19% Similarity=0.193 Sum_probs=56.7
Q ss_pred EEEEEcCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCC-------EEEeCCCHHHHHHhcCCccEEEEcCCCc
Q 022313 183 SLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGAD-------KFVVSSDLEQMKALGKSLDFIIDTASGD 255 (299)
Q Consensus 183 ~vlI~G~g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~-------~v~~~~~~~~~~~~~~~~d~v~d~~g~~ 255 (299)
+|+|+|+|.+|...+..+...|.+|+++++ +++.+.+ ++.|.. ..+.........+....+|++|-++...
T Consensus 2 kI~IiG~G~iG~~~a~~L~~~g~~V~~~~r-~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vilavk~~ 79 (305)
T PRK12921 2 RIAVVGAGAVGGTFGGRLLEAGRDVTFLVR-PKRAKAL-RERGLVIRSDHGDAVVPGPVITDPEELTGPFDLVILAVKAY 79 (305)
T ss_pred eEEEECCCHHHHHHHHHHHHCCCceEEEec-HHHHHHH-HhCCeEEEeCCCeEEecceeecCHHHccCCCCEEEEEeccc
Confidence 589999999999888888888999999999 6677666 344421 1111000111223347899999998876
Q ss_pred hhHHHHHHhc----ccCcEEEEE
Q 022313 256 HPFDAYMSLL----KVAGVYVLV 274 (299)
Q Consensus 256 ~~~~~~~~~l----~~~G~~v~~ 274 (299)
. .+.+++.+ .++..++.+
T Consensus 80 ~-~~~~~~~l~~~~~~~~~ii~~ 101 (305)
T PRK12921 80 Q-LDAAIPDLKPLVGEDTVIIPL 101 (305)
T ss_pred C-HHHHHHHHHhhcCCCCEEEEe
Confidence 5 45544444 444555544
No 410
>PRK11207 tellurite resistance protein TehB; Provisional
Probab=95.66 E-value=0.11 Score=43.05 Aligned_cols=93 Identities=17% Similarity=0.224 Sum_probs=59.0
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHh---cCCCEE-EeCCCHHHHHHhcCCccEEEEcCCC
Q 022313 179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL---LGADKF-VVSSDLEQMKALGKSLDFIIDTASG 254 (299)
Q Consensus 179 ~~g~~vlI~G~g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~---~g~~~v-~~~~~~~~~~~~~~~~d~v~d~~g~ 254 (299)
.++.+||-+|+|. |..+..+++. |.+|++++.+++-.+.+.+. .+...+ +...+.... ...+.||+|+....-
T Consensus 29 ~~~~~vLDiGcG~-G~~a~~La~~-g~~V~gvD~S~~~i~~a~~~~~~~~~~~v~~~~~d~~~~-~~~~~fD~I~~~~~~ 105 (197)
T PRK11207 29 VKPGKTLDLGCGN-GRNSLYLAAN-GFDVTAWDKNPMSIANLERIKAAENLDNLHTAVVDLNNL-TFDGEYDFILSTVVL 105 (197)
T ss_pred CCCCcEEEECCCC-CHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHHcCCCcceEEecChhhC-CcCCCcCEEEEecch
Confidence 5668899999875 7777778775 78999999998766655322 222211 011111111 123579999875431
Q ss_pred --------chhHHHHHHhcccCcEEEEE
Q 022313 255 --------DHPFDAYMSLLKVAGVYVLV 274 (299)
Q Consensus 255 --------~~~~~~~~~~l~~~G~~v~~ 274 (299)
...+..+.+.|+++|.++.+
T Consensus 106 ~~~~~~~~~~~l~~i~~~LkpgG~~~~~ 133 (197)
T PRK11207 106 MFLEAKTIPGLIANMQRCTKPGGYNLIV 133 (197)
T ss_pred hhCCHHHHHHHHHHHHHHcCCCcEEEEE
Confidence 13467788899999996554
No 411
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=95.65 E-value=0.25 Score=41.67 Aligned_cols=75 Identities=27% Similarity=0.279 Sum_probs=48.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHh---cCCCE-EE--eCCCHHHHHHh-------cCC
Q 022313 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSK-KEEALSL---LGADK-FV--VSSDLEQMKAL-------GKS 244 (299)
Q Consensus 180 ~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~-~~~~~~~---~g~~~-v~--~~~~~~~~~~~-------~~~ 244 (299)
+++++||.|+ |.+|...+..+...|++|+++.++... .+...+. .+... ++ +..+.+.+.++ ..+
T Consensus 4 ~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (248)
T PRK05557 4 EGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEFGG 83 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4578999998 999999999999999999887776543 2222222 23221 22 44444433322 257
Q ss_pred ccEEEEcCCC
Q 022313 245 LDFIIDTASG 254 (299)
Q Consensus 245 ~d~v~d~~g~ 254 (299)
+|.++.+.|.
T Consensus 84 id~vi~~ag~ 93 (248)
T PRK05557 84 VDILVNNAGI 93 (248)
T ss_pred CCEEEECCCc
Confidence 8999998874
No 412
>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []. In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....
Probab=95.63 E-value=0.31 Score=37.35 Aligned_cols=90 Identities=18% Similarity=0.330 Sum_probs=61.2
Q ss_pred EEEEcC-ChHHHHHHHHHHHCC--CeEEEEe--CCchHHHHHHHhcCCCEEEeCCCH--HHHH-----------------
Q 022313 184 LGVIGL-GGLGHMAVKFGKAFG--LNVTVLS--TSTSKKEEALSLLGADKFVVSSDL--EQMK----------------- 239 (299)
Q Consensus 184 vlI~G~-g~~G~~a~~~a~~~g--~~v~~~~--~~~~~~~~~~~~~g~~~v~~~~~~--~~~~----------------- 239 (299)
|.|+|+ |++|..+..+.+... .+|+... ++-+.+.+..++|....+...++. +.++
T Consensus 1 i~ILGsTGSIG~qtLdVi~~~~d~f~v~~Lsa~~n~~~L~~q~~~f~p~~v~i~~~~~~~~l~~~~~~~~~~~~v~~G~~ 80 (129)
T PF02670_consen 1 IAILGSTGSIGTQTLDVIRKHPDKFEVVALSAGSNIEKLAEQAREFKPKYVVIADEEAYEELKKALPSKGPGIEVLSGPE 80 (129)
T ss_dssp EEEESTTSHHHHHHHHHHHHCTTTEEEEEEEESSTHHHHHHHHHHHT-SEEEESSHHHHHHHHHHHHHTTSSSEEEESHH
T ss_pred CEEEcCCcHHHHHHHHHHHhCCCceEEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHHhhhcCCCCEEEeChH
Confidence 578899 999999999999887 4776665 444455555578888777655542 1121
Q ss_pred ---Hh--cCCccEEEEcCCCchhHHHHHHhcccCcEEEE
Q 022313 240 ---AL--GKSLDFIIDTASGDHPFDAYMSLLKVAGVYVL 273 (299)
Q Consensus 240 ---~~--~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~ 273 (299)
++ ..++|+|+.++-+...+.-.+.+++.+-++.+
T Consensus 81 ~l~~~~~~~~~D~vv~Ai~G~aGL~pt~~Ai~~gk~iaL 119 (129)
T PF02670_consen 81 GLEELAEEPEVDIVVNAIVGFAGLKPTLAAIKAGKDIAL 119 (129)
T ss_dssp HHHHHHTHTT-SEEEE--SSGGGHHHHHHHHHTTSEEEE
T ss_pred HHHHHhcCCCCCEEEEeCcccchHHHHHHHHHCCCeEEE
Confidence 11 15799999999988878888888887766543
No 413
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=95.62 E-value=0.065 Score=48.42 Aligned_cols=75 Identities=19% Similarity=0.180 Sum_probs=51.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcC----CC-EEEeCCCHHHHHHhc--CCccEEEEc
Q 022313 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLG----AD-KFVVSSDLEQMKALG--KSLDFIIDT 251 (299)
Q Consensus 180 ~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g----~~-~v~~~~~~~~~~~~~--~~~d~v~d~ 251 (299)
++++|||.|+ |.+|...++.+...|.+|+++++.........+.++ .. ...+..+.+.+.++- .++|+|+.+
T Consensus 3 ~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vih~ 82 (349)
T TIGR02622 3 QGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAEFKPEIVFHL 82 (349)
T ss_pred CCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHHHhhcCCCEEEEC
Confidence 4688999997 999999999999999999999887664433212222 11 122444555555442 257999999
Q ss_pred CCC
Q 022313 252 ASG 254 (299)
Q Consensus 252 ~g~ 254 (299)
++.
T Consensus 83 A~~ 85 (349)
T TIGR02622 83 AAQ 85 (349)
T ss_pred Ccc
Confidence 873
No 414
>PLN02780 ketoreductase/ oxidoreductase
Probab=95.62 E-value=0.07 Score=47.76 Aligned_cols=44 Identities=20% Similarity=0.167 Sum_probs=38.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHh
Q 022313 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL 223 (299)
Q Consensus 180 ~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~ 223 (299)
.|++++|.|+ +++|...++.+...|++|++++|++++.+.+.++
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~ 96 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDS 96 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHH
Confidence 5789999998 8999999998888899999999999887765443
No 415
>PRK14967 putative methyltransferase; Provisional
Probab=95.61 E-value=0.26 Score=41.52 Aligned_cols=94 Identities=24% Similarity=0.255 Sum_probs=61.4
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCchHHHHHHH---hcCCC-EEEeCCCHHHHHHhcCCccEEEEcC
Q 022313 178 NQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALS---LLGAD-KFVVSSDLEQMKALGKSLDFIIDTA 252 (299)
Q Consensus 178 ~~~g~~vlI~G~g~~G~~a~~~a~~~g~-~v~~~~~~~~~~~~~~~---~~g~~-~v~~~~~~~~~~~~~~~~d~v~d~~ 252 (299)
++++++||-.|+|. |..+..+++. +. +++.++.+++..+.+.+ ..+.. .+++.+-.+.. ..+.||+|+.+.
T Consensus 34 ~~~~~~vLDlGcG~-G~~~~~la~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~~~d~~~~~--~~~~fD~Vi~np 109 (223)
T PRK14967 34 LGPGRRVLDLCTGS-GALAVAAAAA-GAGSVTAVDISRRAVRSARLNALLAGVDVDVRRGDWARAV--EFRPFDVVVSNP 109 (223)
T ss_pred cCCCCeEEEecCCH-HHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHHhCCeeEEEECchhhhc--cCCCeeEEEECC
Confidence 37889999999987 8888888775 55 99999999887765533 23332 22222211111 135799999753
Q ss_pred CCc---------------------------hhHHHHHHhcccCcEEEEEc
Q 022313 253 SGD---------------------------HPFDAYMSLLKVAGVYVLVG 275 (299)
Q Consensus 253 g~~---------------------------~~~~~~~~~l~~~G~~v~~g 275 (299)
+-. ..+..+.+.|+++|+++.+-
T Consensus 110 Py~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~Lk~gG~l~~~~ 159 (223)
T PRK14967 110 PYVPAPPDAPPSRGPARAWDAGPDGRAVLDRLCDAAPALLAPGGSLLLVQ 159 (223)
T ss_pred CCCCCCcccccccChhHhhhCCCcHHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 210 12456778999999998763
No 416
>PRK10669 putative cation:proton antiport protein; Provisional
Probab=95.61 E-value=0.098 Score=50.58 Aligned_cols=92 Identities=15% Similarity=0.126 Sum_probs=67.7
Q ss_pred CEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEE-eCCCHHHHHHhc-CCccEEEEcCCCchh--
Q 022313 182 KSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFV-VSSDLEQMKALG-KSLDFIIDTASGDHP-- 257 (299)
Q Consensus 182 ~~vlI~G~g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~-~~~~~~~~~~~~-~~~d~v~d~~g~~~~-- 257 (299)
+.++|.|.|.+|+..++.++..|.++++++.++++.+++ ++.|...+. |..+++.+++.. +.+|.++-++++...
T Consensus 418 ~hiiI~G~G~~G~~la~~L~~~g~~vvvId~d~~~~~~~-~~~g~~~i~GD~~~~~~L~~a~i~~a~~viv~~~~~~~~~ 496 (558)
T PRK10669 418 NHALLVGYGRVGSLLGEKLLAAGIPLVVIETSRTRVDEL-RERGIRAVLGNAANEEIMQLAHLDCARWLLLTIPNGYEAG 496 (558)
T ss_pred CCEEEECCChHHHHHHHHHHHCCCCEEEEECCHHHHHHH-HHCCCeEEEcCCCCHHHHHhcCccccCEEEEEcCChHHHH
Confidence 678999999999999999999999999999999999888 567755444 445566666665 789988877776431
Q ss_pred -HHHHHHhcccCcEEEEE
Q 022313 258 -FDAYMSLLKVAGVYVLV 274 (299)
Q Consensus 258 -~~~~~~~l~~~G~~v~~ 274 (299)
.-...+...+.-+++..
T Consensus 497 ~iv~~~~~~~~~~~iiar 514 (558)
T PRK10669 497 EIVASAREKRPDIEIIAR 514 (558)
T ss_pred HHHHHHHHHCCCCeEEEE
Confidence 22233445555566544
No 417
>COG4122 Predicted O-methyltransferase [General function prediction only]
Probab=95.61 E-value=0.19 Score=42.27 Aligned_cols=98 Identities=20% Similarity=0.263 Sum_probs=68.4
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCC--CeEEEEeCCchHHHHHHH---hcCCCE---EEe-CCCHHHHHH-hcCCccEE
Q 022313 179 QPGKSLGVIGLGGLGHMAVKFGKAFG--LNVTVLSTSTSKKEEALS---LLGADK---FVV-SSDLEQMKA-LGKSLDFI 248 (299)
Q Consensus 179 ~~g~~vlI~G~g~~G~~a~~~a~~~g--~~v~~~~~~~~~~~~~~~---~~g~~~---v~~-~~~~~~~~~-~~~~~d~v 248 (299)
++.+++|=+|.+ +|+.++.+|..+. .+++.++++++..+.+++ +.|.++ ++. .+..+.+.. ..+.||+|
T Consensus 58 ~~~k~iLEiGT~-~GySal~mA~~l~~~g~l~tiE~~~e~~~~A~~n~~~ag~~~~i~~~~~gdal~~l~~~~~~~fDli 136 (219)
T COG4122 58 SGPKRILEIGTA-IGYSALWMALALPDDGRLTTIERDEERAEIARENLAEAGVDDRIELLLGGDALDVLSRLLDGSFDLV 136 (219)
T ss_pred cCCceEEEeecc-cCHHHHHHHhhCCCCCeEEEEeCCHHHHHHHHHHHHHcCCcceEEEEecCcHHHHHHhccCCCccEE
Confidence 677888888864 4777888888775 489999999998777643 446444 222 133444554 35889999
Q ss_pred EEcCCC---chhHHHHHHhcccCcEEEEEcCC
Q 022313 249 IDTASG---DHPFDAYMSLLKVAGVYVLVGFP 277 (299)
Q Consensus 249 ~d~~g~---~~~~~~~~~~l~~~G~~v~~g~~ 277 (299)
|--..- +..++.+++.|+++|.++.=-..
T Consensus 137 FIDadK~~yp~~le~~~~lLr~GGliv~DNvl 168 (219)
T COG4122 137 FIDADKADYPEYLERALPLLRPGGLIVADNVL 168 (219)
T ss_pred EEeCChhhCHHHHHHHHHHhCCCcEEEEeecc
Confidence 865553 33689999999999998754333
No 418
>TIGR01532 E4PD_g-proteo D-erythrose-4-phosphate dehydrogenase. Accordingly, this model is very close to the corresponding models for GAPDH, and those sequences which hit above trusted here invariably hit between trusted and noise to the GAPDH model (TIGR01534). Similarly, it may be found that there are species outside of the gamma proteobacteria which synthesize pyridoxine and have more than one aparrent GAPDH gene of which one may have E4PD activity - this may necessitate a readjustment of these models. Alternatively, some of the GAPDH enzymes may prove to be bifunctional in certain species.
Probab=95.60 E-value=0.11 Score=46.53 Aligned_cols=94 Identities=14% Similarity=0.172 Sum_probs=63.3
Q ss_pred EEEEEcCChHHHHHHHHHHHCC----CeEEEEeCC-c-hHHHHHHHhcCC----------------------CEEEeCCC
Q 022313 183 SLGVIGLGGLGHMAVKFGKAFG----LNVTVLSTS-T-SKKEEALSLLGA----------------------DKFVVSSD 234 (299)
Q Consensus 183 ~vlI~G~g~~G~~a~~~a~~~g----~~v~~~~~~-~-~~~~~~~~~~g~----------------------~~v~~~~~ 234 (299)
+|.|.|.|.+|....+.+...+ ..|..+..- + +....+ -++.. -.++..++
T Consensus 1 ~IaInGfGrIGR~vlr~l~e~~~~~~~~vvaInd~~~~~~~ayl-l~yDS~hg~~~~~v~~~~~~l~v~g~~i~v~~~~~ 79 (325)
T TIGR01532 1 RVAINGFGRIGRNVLRALYESGERLGIEVVALNELADQASMAHL-LRYDTSHGRFPGEVKVDGDCLHVNGDCIRVLHSPT 79 (325)
T ss_pred CEEEECCCHHHHHHHHHHHhcCCCCCeEEEEEecCCCHHHHHHH-HhhCccCCCCCCcEEEeCCEEEECCeEEEEEEcCC
Confidence 4789999999999999988653 466655432 2 222233 12221 01223334
Q ss_pred HHHHHHhcCCccEEEEcCCCchhHHHHHHhcccCcEEEEEcCC
Q 022313 235 LEQMKALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP 277 (299)
Q Consensus 235 ~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~ 277 (299)
++.+.+-..++|+||+|+|.....+.+...++.|++.+.+..+
T Consensus 80 p~~~~w~~~gvDiVie~tG~~~s~e~a~~~l~aGa~~V~~SaP 122 (325)
T TIGR01532 80 PEALPWRALGVDLVLDCTGVYGNREQGERHIRAGAKRVLFSHP 122 (325)
T ss_pred hhhccccccCCCEEEEccchhccHHHHHHHHHcCCeEEEecCC
Confidence 4444444468999999999987778888999999999999877
No 419
>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional
Probab=95.59 E-value=0.086 Score=47.65 Aligned_cols=86 Identities=13% Similarity=0.114 Sum_probs=55.7
Q ss_pred HHHHHhhhccCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHH----HHHHhcC------CCEE-EeCCC
Q 022313 167 TVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKE----EALSLLG------ADKF-VVSSD 234 (299)
Q Consensus 167 ta~~al~~~~~~~~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~----~~~~~~g------~~~v-~~~~~ 234 (299)
|+|.-++.... -+.++|||.|+ |-+|...+..+...|.+|+++++...... .+....+ ...+ .|..+
T Consensus 2 ~~~~~~~~~~~-~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d 80 (348)
T PRK15181 2 TAYEELRTKLV-LAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRK 80 (348)
T ss_pred chhhhhhhccc-ccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCC
Confidence 45665544444 45578999998 99999999999999999999987543221 1111111 1111 13444
Q ss_pred HHHHHHhcCCccEEEEcCC
Q 022313 235 LEQMKALGKSLDFIIDTAS 253 (299)
Q Consensus 235 ~~~~~~~~~~~d~v~d~~g 253 (299)
.+.+..+-.++|+||.+++
T Consensus 81 ~~~l~~~~~~~d~ViHlAa 99 (348)
T PRK15181 81 FTDCQKACKNVDYVLHQAA 99 (348)
T ss_pred HHHHHHHhhCCCEEEECcc
Confidence 5555555567999999886
No 420
>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional
Probab=95.58 E-value=0.12 Score=44.32 Aligned_cols=90 Identities=21% Similarity=0.255 Sum_probs=53.9
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCchHHHHH----------------------HHhcCC-CEEEeCC--
Q 022313 180 PGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEA----------------------LSLLGA-DKFVVSS-- 233 (299)
Q Consensus 180 ~g~~vlI~G~g~~G~~a~~~a~~~g~-~v~~~~~~~~~~~~~----------------------~~~~g~-~~v~~~~-- 233 (299)
...+|+|+|+|++|..++..+.+.|. ++++++.+.-+...+ .+++.. -.+....
T Consensus 31 ~~~~VliiG~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp~v~i~~~~~~ 110 (245)
T PRK05690 31 KAARVLVVGLGGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARINPHIAIETINAR 110 (245)
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHCCCCEEEEEecc
Confidence 45789999999999999999999998 777776542221111 122221 1111111
Q ss_pred -CHHHHHHhcCCccEEEEcCCCchhHHHHHHhcccCc
Q 022313 234 -DLEQMKALGKSLDFIIDTASGDHPFDAYMSLLKVAG 269 (299)
Q Consensus 234 -~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G 269 (299)
+.+...++-+++|+|++|+..........+.....+
T Consensus 111 i~~~~~~~~~~~~DiVi~~~D~~~~r~~ln~~~~~~~ 147 (245)
T PRK05690 111 LDDDELAALIAGHDLVLDCTDNVATRNQLNRACFAAK 147 (245)
T ss_pred CCHHHHHHHHhcCCEEEecCCCHHHHHHHHHHHHHhC
Confidence 223344455789999999998763333333333333
No 421
>PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional
Probab=95.58 E-value=0.17 Score=46.14 Aligned_cols=92 Identities=16% Similarity=0.269 Sum_probs=66.4
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHC--CCeEEEEe--CCchHHHHHHHhcCCCEEEeCCCH--HHHHH--------------
Q 022313 182 KSLGVIGL-GGLGHMAVKFGKAF--GLNVTVLS--TSTSKKEEALSLLGADKFVVSSDL--EQMKA-------------- 240 (299)
Q Consensus 182 ~~vlI~G~-g~~G~~a~~~a~~~--g~~v~~~~--~~~~~~~~~~~~~g~~~v~~~~~~--~~~~~-------------- 240 (299)
++|.|+|+ |++|..++...+.. ..+|++++ ++.+++.+..++|+...+...++. ..+++
T Consensus 2 k~VaILGsTGSIG~~tL~vi~~~p~~f~VvaLaa~~n~~~l~~q~~~f~p~~v~i~~~~~~~~l~~~l~~~~~~v~~G~~ 81 (385)
T PRK05447 2 KRITILGSTGSIGTQTLDVIRRNPDRFRVVALSAGKNVELLAEQAREFRPKYVVVADEEAAKELKEALAAAGIEVLAGEE 81 (385)
T ss_pred ceEEEEcCChHHHHHHHHHHHhCccccEEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHhhccCCceEEEChh
Confidence 57899997 99999999998865 45777775 556677777788998776654432 11221
Q ss_pred ----h-c-CCccEEEEcCCCchhHHHHHHhcccCcEEEE
Q 022313 241 ----L-G-KSLDFIIDTASGDHPFDAYMSLLKVAGVYVL 273 (299)
Q Consensus 241 ----~-~-~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~ 273 (299)
+ . ..+|+|+.++.|...+.-.+.+++.|-++.+
T Consensus 82 ~~~~l~~~~~vD~Vv~Ai~G~aGl~ptl~Ai~aGK~VaL 120 (385)
T PRK05447 82 GLCELAALPEADVVVAAIVGAAGLLPTLAAIRAGKRIAL 120 (385)
T ss_pred HHHHHhcCCCCCEEEEeCcCcccHHHHHHHHHCCCcEEE
Confidence 1 1 3689999999987667888888888776655
No 422
>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase. The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional
Probab=95.57 E-value=0.11 Score=42.73 Aligned_cols=114 Identities=12% Similarity=0.062 Sum_probs=75.9
Q ss_pred ccchhhHHHHHHhhhccC---------CCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCC-CE
Q 022313 160 PLLCAGITVYTPMMRHKM---------NQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGA-DK 228 (299)
Q Consensus 160 ~~~~~~~ta~~al~~~~~---------~~~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~-~~ 228 (299)
.+||...+....|+.... --.|++++|+|. ..+|.=.+.++...+++|++...+.-.. . .+-+. .+
T Consensus 32 ~~PCTp~avi~lL~~~~i~~~~~~~~~~l~GK~vvVIGrS~iVGkPla~lL~~~~AtVti~~~~~~~~--~-~~~~~~~h 108 (197)
T cd01079 32 ILPCTPLAIVKILEFLGIYNKILPYGNRLYGKTITIINRSEVVGRPLAALLANDGARVYSVDINGIQV--F-TRGESIRH 108 (197)
T ss_pred ccCCCHHHHHHHHHHhCCcccccccCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEEecCcccc--c-cccccccc
Confidence 456666666666665432 268999999997 6899999999999999999885432111 1 01010 00
Q ss_pred EEe-CCC-HHHHHHhcCCccEEEEcCCCchhHHHHHHhcccCcEEEEEcCC
Q 022313 229 FVV-SSD-LEQMKALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP 277 (299)
Q Consensus 229 v~~-~~~-~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~ 277 (299)
--- ..+ ...+.+..+..|+|+-++|.+. +.---+.++++..++++|..
T Consensus 109 s~t~~~~~~~~l~~~~~~ADIVIsAvG~~~-~~i~~d~ik~GavVIDVGi~ 158 (197)
T cd01079 109 EKHHVTDEEAMTLDCLSQSDVVITGVPSPN-YKVPTELLKDGAICINFASI 158 (197)
T ss_pred ccccccchhhHHHHHhhhCCEEEEccCCCC-CccCHHHcCCCcEEEEcCCC
Confidence 000 011 2235566688999999999987 42346789999999999976
No 423
>PRK06398 aldose dehydrogenase; Validated
Probab=95.57 E-value=0.053 Score=46.73 Aligned_cols=70 Identities=23% Similarity=0.135 Sum_probs=48.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEEeCCCHHHHHHh-------cCCccEEEEc
Q 022313 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKAL-------GKSLDFIIDT 251 (299)
Q Consensus 180 ~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~-------~~~~d~v~d~ 251 (299)
+++++||.|+ +++|...+..+...|++|+++++++.+.... .....|..+.+.+.++ .+++|+++.+
T Consensus 5 ~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~~~~-----~~~~~D~~~~~~i~~~~~~~~~~~~~id~li~~ 79 (258)
T PRK06398 5 KDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSYNDV-----DYFKVDVSNKEQVIKGIDYVISKYGRIDILVNN 79 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCccccCce-----EEEEccCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 4689999998 8999999999999999999999875432211 0111244444443332 2579999998
Q ss_pred CCC
Q 022313 252 ASG 254 (299)
Q Consensus 252 ~g~ 254 (299)
.|.
T Consensus 80 Ag~ 82 (258)
T PRK06398 80 AGI 82 (258)
T ss_pred CCC
Confidence 873
No 424
>PRK07417 arogenate dehydrogenase; Reviewed
Probab=95.57 E-value=0.12 Score=45.33 Aligned_cols=89 Identities=24% Similarity=0.191 Sum_probs=60.0
Q ss_pred EEEEEcCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEEeCCCHHHHHHhcCCccEEEEcCCCchh---HH
Q 022313 183 SLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHP---FD 259 (299)
Q Consensus 183 ~vlI~G~g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~v~d~~g~~~~---~~ 259 (299)
+|.|+|.|.+|...+..++..|.+|++++++++..+.+ .+.|...... .+. +.....|+||.|+..... +.
T Consensus 2 ~I~IIG~G~mG~sla~~L~~~g~~V~~~d~~~~~~~~a-~~~g~~~~~~-~~~----~~~~~aDlVilavp~~~~~~~~~ 75 (279)
T PRK07417 2 KIGIVGLGLIGGSLGLDLRSLGHTVYGVSRRESTCERA-IERGLVDEAS-TDL----SLLKDCDLVILALPIGLLLPPSE 75 (279)
T ss_pred eEEEEeecHHHHHHHHHHHHCCCEEEEEECCHHHHHHH-HHCCCccccc-CCH----hHhcCCCEEEEcCCHHHHHHHHH
Confidence 58899999999988888888899999999998888877 3555311111 111 123678999999886542 23
Q ss_pred HHHHhcccCcEEEEEcCC
Q 022313 260 AYMSLLKVAGVYVLVGFP 277 (299)
Q Consensus 260 ~~~~~l~~~G~~v~~g~~ 277 (299)
.....++++..+.+++..
T Consensus 76 ~l~~~l~~~~ii~d~~Sv 93 (279)
T PRK07417 76 QLIPALPPEAIVTDVGSV 93 (279)
T ss_pred HHHHhCCCCcEEEeCcch
Confidence 333445556566666644
No 425
>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot. GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....
Probab=95.56 E-value=0.34 Score=36.19 Aligned_cols=90 Identities=22% Similarity=0.285 Sum_probs=60.5
Q ss_pred EEEEEcCChHHHHHHHHHHHC--CCeEE-EEeCCchHHHHHHHhcCCCEEEeCCCHHHHHHhcCCccEEEEcCCCchhHH
Q 022313 183 SLGVIGLGGLGHMAVKFGKAF--GLNVT-VLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHPFD 259 (299)
Q Consensus 183 ~vlI~G~g~~G~~a~~~a~~~--g~~v~-~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~ 259 (299)
++.|+|.|.+|......++.. +.++. ++++++++.+.+.+++|.. .+ .+.+.+.+. ..+|+|+-++.......
T Consensus 2 ~v~iiG~G~~g~~~~~~~~~~~~~~~v~~v~d~~~~~~~~~~~~~~~~-~~--~~~~~ll~~-~~~D~V~I~tp~~~h~~ 77 (120)
T PF01408_consen 2 RVGIIGAGSIGRRHLRALLRSSPDFEVVAVCDPDPERAEAFAEKYGIP-VY--TDLEELLAD-EDVDAVIIATPPSSHAE 77 (120)
T ss_dssp EEEEESTSHHHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHTTSE-EE--SSHHHHHHH-TTESEEEEESSGGGHHH
T ss_pred EEEEECCcHHHHHHHHHHHhcCCCcEEEEEEeCCHHHHHHHHHHhccc-ch--hHHHHHHHh-hcCCEEEEecCCcchHH
Confidence 578999999998888777766 34655 4566666777777788876 32 222222111 47999999999877566
Q ss_pred HHHHhcccCcEEEEEcCC
Q 022313 260 AYMSLLKVAGVYVLVGFP 277 (299)
Q Consensus 260 ~~~~~l~~~G~~v~~g~~ 277 (299)
.+..+++.+- -+.+..+
T Consensus 78 ~~~~~l~~g~-~v~~EKP 94 (120)
T PF01408_consen 78 IAKKALEAGK-HVLVEKP 94 (120)
T ss_dssp HHHHHHHTTS-EEEEESS
T ss_pred HHHHHHHcCC-EEEEEcC
Confidence 6666666555 5566555
No 426
>PRK05479 ketol-acid reductoisomerase; Provisional
Probab=95.56 E-value=0.11 Score=46.43 Aligned_cols=87 Identities=21% Similarity=0.188 Sum_probs=60.7
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEEeCCCHHHHHHhcCCccEEEEcCCCchhH
Q 022313 179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHPF 258 (299)
Q Consensus 179 ~~g~~vlI~G~g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~v~d~~g~~~~~ 258 (299)
-++++|.|+|.|.+|.+.++-++..|.+|++..+...+.....++.|.... ...++....|+|+-++.... .
T Consensus 15 L~gktIgIIG~GsmG~AlA~~L~~sG~~Vvv~~r~~~~s~~~A~~~G~~~~-------s~~eaa~~ADVVvLaVPd~~-~ 86 (330)
T PRK05479 15 IKGKKVAIIGYGSQGHAHALNLRDSGVDVVVGLREGSKSWKKAEADGFEVL-------TVAEAAKWADVIMILLPDEV-Q 86 (330)
T ss_pred hCCCEEEEEeeHHHHHHHHHHHHHCCCEEEEEECCchhhHHHHHHCCCeeC-------CHHHHHhcCCEEEEcCCHHH-H
Confidence 457889999999999999999999999998877775555444456675321 22344567899999998754 3
Q ss_pred HH-----HHHhcccCcEEEE
Q 022313 259 DA-----YMSLLKVAGVYVL 273 (299)
Q Consensus 259 ~~-----~~~~l~~~G~~v~ 273 (299)
.. ....++++..++.
T Consensus 87 ~~V~~~~I~~~Lk~g~iL~~ 106 (330)
T PRK05479 87 AEVYEEEIEPNLKEGAALAF 106 (330)
T ss_pred HHHHHHHHHhcCCCCCEEEE
Confidence 33 3345566555533
No 427
>TIGR00438 rrmJ cell division protein FtsJ.
Probab=95.56 E-value=0.26 Score=40.28 Aligned_cols=99 Identities=20% Similarity=0.264 Sum_probs=59.0
Q ss_pred hccCCCCCCEEEEEcCChHHHHHHHHHHHCC-CeEEEEeCCchHHHHHHHhcCCCEE-EeCCCHHH---HHH-h-cCCcc
Q 022313 174 RHKMNQPGKSLGVIGLGGLGHMAVKFGKAFG-LNVTVLSTSTSKKEEALSLLGADKF-VVSSDLEQ---MKA-L-GKSLD 246 (299)
Q Consensus 174 ~~~~~~~g~~vlI~G~g~~G~~a~~~a~~~g-~~v~~~~~~~~~~~~~~~~~g~~~v-~~~~~~~~---~~~-~-~~~~d 246 (299)
....++++++||.+|+|.-+.......+..+ .+|++++.++.. ...+.+.+ .+..+... +.+ . .+++|
T Consensus 26 ~~~~i~~g~~VLDiG~GtG~~~~~l~~~~~~~~~v~~vDis~~~-----~~~~i~~~~~d~~~~~~~~~l~~~~~~~~~D 100 (188)
T TIGR00438 26 KFKLIKPGDTVLDLGAAPGGWSQVAVEQVGGKGRVIAVDLQPMK-----PIENVDFIRGDFTDEEVLNKIRERVGDDKVD 100 (188)
T ss_pred HhcccCCCCEEEEecCCCCHHHHHHHHHhCCCceEEEEeccccc-----cCCCceEEEeeCCChhHHHHHHHHhCCCCcc
Confidence 3445689999999999765544333333323 489999988753 11233322 13322222 222 2 35799
Q ss_pred EEEEcC-----CC------------chhHHHHHHhcccCcEEEEEcCC
Q 022313 247 FIIDTA-----SG------------DHPFDAYMSLLKVAGVYVLVGFP 277 (299)
Q Consensus 247 ~v~d~~-----g~------------~~~~~~~~~~l~~~G~~v~~g~~ 277 (299)
+|+... |. ...+..+.+.|+++|+++.....
T Consensus 101 ~V~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lvi~~~~ 148 (188)
T TIGR00438 101 VVMSDAAPNISGYWDIDHLRSIDLVELALDIAKEVLKPKGNFVVKVFQ 148 (188)
T ss_pred EEEcCCCCCCCCCccccHHHHHHHHHHHHHHHHHHccCCCEEEEEEcc
Confidence 999532 21 23467788999999999986543
No 428
>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase
Probab=95.55 E-value=0.15 Score=52.38 Aligned_cols=95 Identities=15% Similarity=0.150 Sum_probs=65.7
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHC-CCe-------------EEEEeCCchHHHHHHHhc-CCC-EEEeCCCHHHHHHhcC
Q 022313 180 PGKSLGVIGLGGLGHMAVKFGKAF-GLN-------------VTVLSTSTSKKEEALSLL-GAD-KFVVSSDLEQMKALGK 243 (299)
Q Consensus 180 ~g~~vlI~G~g~~G~~a~~~a~~~-g~~-------------v~~~~~~~~~~~~~~~~~-g~~-~v~~~~~~~~~~~~~~ 243 (299)
..++|+|+|+|.+|...+..+... ++. |++.+.+.++.+++.+.+ +.+ ..++..+.+.+.++-.
T Consensus 568 ~~~rIlVLGAG~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~~~~~~v~lDv~D~e~L~~~v~ 647 (1042)
T PLN02819 568 KSQNVLILGAGRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGIENAEAVQLDVSDSESLLKYVS 647 (1042)
T ss_pred cCCcEEEECCCHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhcCCCceEEeecCCHHHHHHhhc
Confidence 467899999999999988888754 334 777888877777776666 432 2344566666666545
Q ss_pred CccEEEEcCCCchhHHHHHHhcccCcEEEEE
Q 022313 244 SLDFIIDTASGDHPFDAYMSLLKVAGVYVLV 274 (299)
Q Consensus 244 ~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~ 274 (299)
++|+|+.++.......-+..|++.+-.+++.
T Consensus 648 ~~DaVIsalP~~~H~~VAkaAieaGkHvv~e 678 (1042)
T PLN02819 648 QVDVVISLLPASCHAVVAKACIELKKHLVTA 678 (1042)
T ss_pred CCCEEEECCCchhhHHHHHHHHHcCCCEEEC
Confidence 6999999999765455555566555444433
No 429
>PRK08655 prephenate dehydrogenase; Provisional
Probab=95.55 E-value=0.11 Score=48.74 Aligned_cols=89 Identities=24% Similarity=0.328 Sum_probs=59.6
Q ss_pred EEEEEc-CChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEEeCCCHHHHHHhcCCccEEEEcCCCch---hH
Q 022313 183 SLGVIG-LGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDH---PF 258 (299)
Q Consensus 183 ~vlI~G-~g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~v~d~~g~~~---~~ 258 (299)
+|.|+| .|.+|...+..++..|.+|++++++++......+++|.. . ..+ ..+.....|+|+-++.... .+
T Consensus 2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~~~gv~-~--~~~---~~e~~~~aDvVIlavp~~~~~~vl 75 (437)
T PRK08655 2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVAKELGVE-Y--AND---NIDAAKDADIVIISVPINVTEDVI 75 (437)
T ss_pred EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHcCCe-e--ccC---HHHHhccCCEEEEecCHHHHHHHH
Confidence 588897 599999999999999999999999887765554667752 1 111 1122356788888877543 12
Q ss_pred HHHHHhcccCcEEEEEcCC
Q 022313 259 DAYMSLLKVAGVYVLVGFP 277 (299)
Q Consensus 259 ~~~~~~l~~~G~~v~~g~~ 277 (299)
......++++..+++++..
T Consensus 76 ~~l~~~l~~~~iViDvsSv 94 (437)
T PRK08655 76 KEVAPHVKEGSLLMDVTSV 94 (437)
T ss_pred HHHHhhCCCCCEEEEcccc
Confidence 3333445666677777653
No 430
>cd05211 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of glutamate dehydrogenase, leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NAD(P)+. This subfamily includes glutamate, leucine, phenylalanine, and valine DHs. Glutamate DH is a multi-domain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. As in other NAD+-dependent DHs, monomers in this family have 2 domains separated by a deep cleft. Here the c-terminal domain contains a modified NAD-binding Rossmann fold with 7 rather than the usual 6 beta strands and one strand anti-parral
Probab=95.54 E-value=0.21 Score=42.01 Aligned_cols=37 Identities=27% Similarity=0.267 Sum_probs=31.0
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCch
Q 022313 179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTS 215 (299)
Q Consensus 179 ~~g~~vlI~G~g~~G~~a~~~a~~~g~~v~~~~~~~~ 215 (299)
-.+.+|+|.|.|.+|..+++++...|++++.+..++.
T Consensus 21 l~g~~vaIqGfGnVG~~~a~~L~~~G~~vV~vsD~~g 57 (217)
T cd05211 21 LEGLTVAVQGLGNVGWGLAKKLAEEGGKVLAVSDPDG 57 (217)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEEcCCC
Confidence 4789999999999999999999999996666554444
No 431
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=95.54 E-value=0.1 Score=44.34 Aligned_cols=74 Identities=19% Similarity=0.231 Sum_probs=51.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHh---cCC-CEEE--eCCCHHHHHHh-------cCCc
Q 022313 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL---LGA-DKFV--VSSDLEQMKAL-------GKSL 245 (299)
Q Consensus 180 ~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~---~g~-~~v~--~~~~~~~~~~~-------~~~~ 245 (299)
+++++||.|+ |.+|...++.+...|++|++++++.+..+.+.+. .+. -.++ |..+.+.+.++ .++.
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 81 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGPV 81 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 4688999998 9999999999999999999999987766554322 222 1222 33344433322 2578
Q ss_pred cEEEEcCC
Q 022313 246 DFIIDTAS 253 (299)
Q Consensus 246 d~v~d~~g 253 (299)
|++|.+.|
T Consensus 82 d~vi~~ag 89 (250)
T TIGR03206 82 DVLVNNAG 89 (250)
T ss_pred CEEEECCC
Confidence 99999997
No 432
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=95.54 E-value=0.092 Score=44.74 Aligned_cols=76 Identities=18% Similarity=0.176 Sum_probs=51.6
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhc---CCC--EEE--eCC--CHHHHHH-------h
Q 022313 179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL---GAD--KFV--VSS--DLEQMKA-------L 241 (299)
Q Consensus 179 ~~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~---g~~--~v~--~~~--~~~~~~~-------~ 241 (299)
.++++++|.|+ |.+|...++.+...|++|++++++.+..+.+.+++ +.. .++ +.. +.+.+.+ .
T Consensus 10 ~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 89 (247)
T PRK08945 10 LKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEEQ 89 (247)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHHH
Confidence 57889999988 99999999988888999999999877655443332 221 122 221 2222222 1
Q ss_pred cCCccEEEEcCCC
Q 022313 242 GKSLDFIIDTASG 254 (299)
Q Consensus 242 ~~~~d~v~d~~g~ 254 (299)
.+++|.++.+.+.
T Consensus 90 ~~~id~vi~~Ag~ 102 (247)
T PRK08945 90 FGRLDGVLHNAGL 102 (247)
T ss_pred hCCCCEEEECCcc
Confidence 2578999998864
No 433
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=95.53 E-value=0.096 Score=48.25 Aligned_cols=99 Identities=16% Similarity=0.210 Sum_probs=63.4
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHH------HHHHhc-CCCEE-EeCCCHHHHHHhc-C---Cc
Q 022313 179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKE------EALSLL-GADKF-VVSSDLEQMKALG-K---SL 245 (299)
Q Consensus 179 ~~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~------~~~~~~-g~~~v-~~~~~~~~~~~~~-~---~~ 245 (299)
..+.+|||.|+ |.+|...++.+...|.+|++++++..+.+ ...+.. +.+.+ .|..+.+.+.+.- + ++
T Consensus 58 ~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~~~ 137 (390)
T PLN02657 58 PKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSEGDPV 137 (390)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHhCCCC
Confidence 56788999998 99999999999889999999999865421 111122 22222 2555555555442 2 79
Q ss_pred cEEEEcCCCch------------hHHHHHHhcccC--cEEEEEcCC
Q 022313 246 DFIIDTASGDH------------PFDAYMSLLKVA--GVYVLVGFP 277 (299)
Q Consensus 246 d~v~d~~g~~~------------~~~~~~~~l~~~--G~~v~~g~~ 277 (299)
|+||.|++... ....+++.++.. ++++.++..
T Consensus 138 D~Vi~~aa~~~~~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~ 183 (390)
T PLN02657 138 DVVVSCLASRTGGVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAI 183 (390)
T ss_pred cEEEECCccCCCCCccchhhHHHHHHHHHHHHHHcCCCEEEEEeec
Confidence 99999887421 112334444433 478887755
No 434
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=95.53 E-value=0.091 Score=44.78 Aligned_cols=74 Identities=23% Similarity=0.230 Sum_probs=51.2
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhc---CCC-E--EEeCCCHHHHHH-------hcCCcc
Q 022313 181 GKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL---GAD-K--FVVSSDLEQMKA-------LGKSLD 246 (299)
Q Consensus 181 g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~-------~~~~~d 246 (299)
++++||.|+ |.+|...+..+...|++|++++++.+..+.+.+.+ +.. . ..+..+.+.+.. ..++.|
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 80 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLD 80 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence 357999998 99999999998889999999999887766553332 221 1 124445443322 235789
Q ss_pred EEEEcCCC
Q 022313 247 FIIDTASG 254 (299)
Q Consensus 247 ~v~d~~g~ 254 (299)
++|-+.+.
T Consensus 81 ~vi~~a~~ 88 (255)
T TIGR01963 81 ILVNNAGI 88 (255)
T ss_pred EEEECCCC
Confidence 99988764
No 435
>PRK06823 ornithine cyclodeaminase; Validated
Probab=95.52 E-value=0.32 Score=43.41 Aligned_cols=108 Identities=16% Similarity=0.165 Sum_probs=73.3
Q ss_pred hccCCCCCCEEEEEcCChHHHHHHHHHHHC-CC-eEEEEeCCchHHHHHHHhc---CCCEEEeCCCHHHHHHhcCCccEE
Q 022313 174 RHKMNQPGKSLGVIGLGGLGHMAVKFGKAF-GL-NVTVLSTSTSKKEEALSLL---GADKFVVSSDLEQMKALGKSLDFI 248 (299)
Q Consensus 174 ~~~~~~~g~~vlI~G~g~~G~~a~~~a~~~-g~-~v~~~~~~~~~~~~~~~~~---g~~~v~~~~~~~~~~~~~~~~d~v 248 (299)
...+ +..+++.|+|+|..+..-++..... .. +|.+..+++++.+.+.+.+ +.+... . +..++...+.|+|
T Consensus 122 ~La~-~d~~~l~iiG~G~qA~~~~~a~~~v~~i~~v~v~~r~~~~a~~~~~~~~~~~~~v~~-~---~~~~~av~~ADIV 196 (315)
T PRK06823 122 LLAP-QHVSAIGIVGTGIQARMQLMYLKNVTDCRQLWVWGRSETALEEYRQYAQALGFAVNT-T---LDAAEVAHAANLI 196 (315)
T ss_pred HhcC-CCCCEEEEECCcHHHHHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHhcCCcEEE-E---CCHHHHhcCCCEE
Confidence 3344 5678899999999998877776644 33 8999999999887665444 332221 1 2234455889999
Q ss_pred EEcCCCchhHHHHHHhcccCcEEEEEcCC--CceeeChhhh
Q 022313 249 IDTASGDHPFDAYMSLLKVAGVYVLVGFP--SKVKFSPASL 287 (299)
Q Consensus 249 ~d~~g~~~~~~~~~~~l~~~G~~v~~g~~--~~~~~~~~~l 287 (299)
+-+++....+- -.+.++++-.+..+|.. ....++..-+
T Consensus 197 ~taT~s~~P~~-~~~~l~~G~hi~~iGs~~p~~~Eld~~~l 236 (315)
T PRK06823 197 VTTTPSREPLL-QAEDIQPGTHITAVGADSPGKQELDAELV 236 (315)
T ss_pred EEecCCCCcee-CHHHcCCCcEEEecCCCCcccccCCHHHH
Confidence 99887654222 23578999999999977 4555665433
No 436
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=95.52 E-value=0.1 Score=45.01 Aligned_cols=98 Identities=18% Similarity=0.161 Sum_probs=62.4
Q ss_pred CCCEEEEEcC---ChHHHHHHHHHHHCCCeEEEEeCCch------HHHHHHHhcCCCEE--EeCCCHHHHHHh-------
Q 022313 180 PGKSLGVIGL---GGLGHMAVKFGKAFGLNVTVLSTSTS------KKEEALSLLGADKF--VVSSDLEQMKAL------- 241 (299)
Q Consensus 180 ~g~~vlI~G~---g~~G~~a~~~a~~~g~~v~~~~~~~~------~~~~~~~~~g~~~v--~~~~~~~~~~~~------- 241 (299)
++++++|.|+ +++|.+.++.+...|++|+++.++.+ ..+++.++.+.... .|-.+.+.+.++
T Consensus 5 ~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~ 84 (258)
T PRK07370 5 TGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQK 84 (258)
T ss_pred CCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHHH
Confidence 5788999986 48999999999999999988754322 23333222221112 244444444332
Q ss_pred cCCccEEEEcCCCc-------h----------------------hHHHHHHhcccCcEEEEEcCC
Q 022313 242 GKSLDFIIDTASGD-------H----------------------PFDAYMSLLKVAGVYVLVGFP 277 (299)
Q Consensus 242 ~~~~d~v~d~~g~~-------~----------------------~~~~~~~~l~~~G~~v~~g~~ 277 (299)
.+++|+++++.|.. . ..+.+++.++.+|+++.++..
T Consensus 85 ~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~ 149 (258)
T PRK07370 85 WGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYL 149 (258)
T ss_pred cCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEecc
Confidence 26799999998731 1 124456677778999888765
No 437
>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]
Probab=95.52 E-value=0.085 Score=47.19 Aligned_cols=88 Identities=26% Similarity=0.317 Sum_probs=59.8
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEEeCCCHHHHHHhcCCccEEEEcCCCch--
Q 022313 179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDH-- 256 (299)
Q Consensus 179 ~~g~~vlI~G~g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~v~d~~g~~~-- 256 (299)
-.|+++.|+|.|.||++.++.++..|.+|...++... .+.. +..+..++- +.++-...|++...+....
T Consensus 144 l~gktvGIiG~GrIG~avA~r~~~Fgm~v~y~~~~~~-~~~~-~~~~~~y~~-------l~ell~~sDii~l~~Plt~~T 214 (324)
T COG1052 144 LRGKTLGIIGLGRIGQAVARRLKGFGMKVLYYDRSPN-PEAE-KELGARYVD-------LDELLAESDIISLHCPLTPET 214 (324)
T ss_pred CCCCEEEEECCCHHHHHHHHHHhcCCCEEEEECCCCC-hHHH-hhcCceecc-------HHHHHHhCCEEEEeCCCChHH
Confidence 4689999999999999999999999999999998875 2222 344443331 3344455677765554321
Q ss_pred ---hHHHHHHhcccCcEEEEEc
Q 022313 257 ---PFDAYMSLLKVAGVYVLVG 275 (299)
Q Consensus 257 ---~~~~~~~~l~~~G~~v~~g 275 (299)
.-...+..|+++..+|-+|
T Consensus 215 ~hLin~~~l~~mk~ga~lVNta 236 (324)
T COG1052 215 RHLINAEELAKMKPGAILVNTA 236 (324)
T ss_pred hhhcCHHHHHhCCCCeEEEECC
Confidence 1234566777777777665
No 438
>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
Probab=95.51 E-value=0.077 Score=50.89 Aligned_cols=94 Identities=20% Similarity=0.176 Sum_probs=61.6
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEEeCCCHHHHHHhcCCccEEEEcCCCchh--
Q 022313 180 PGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHP-- 257 (299)
Q Consensus 180 ~g~~vlI~G~g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~v~d~~g~~~~-- 257 (299)
++++++|+|+|++|.+++..+...|++|+++.++.++.+.+.++++.. .+...+. ........|++++++.-...
T Consensus 378 ~~k~vlIlGaGGagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l~~~-~~~~~~~--~~~~~~~~diiINtT~vGm~~~ 454 (529)
T PLN02520 378 AGKLFVVIGAGGAGKALAYGAKEKGARVVIANRTYERAKELADAVGGQ-ALTLADL--ENFHPEEGMILANTTSVGMQPN 454 (529)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCc-eeeHhHh--hhhccccCeEEEecccCCCCCC
Confidence 467899999999999999999999999999999988888876666532 2222111 11112357888887753210
Q ss_pred ---HHHHHHhcccCcEEEEEcC
Q 022313 258 ---FDAYMSLLKVAGVYVLVGF 276 (299)
Q Consensus 258 ---~~~~~~~l~~~G~~v~~g~ 276 (299)
.......+++...++++-.
T Consensus 455 ~~~~pl~~~~l~~~~~v~D~vY 476 (529)
T PLN02520 455 VDETPISKHALKHYSLVFDAVY 476 (529)
T ss_pred CCCCcccHhhCCCCCEEEEecc
Confidence 0112345666666666633
No 439
>PRK07775 short chain dehydrogenase; Provisional
Probab=95.51 E-value=0.15 Score=44.25 Aligned_cols=75 Identities=19% Similarity=0.222 Sum_probs=51.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHh---cCCCE-E--EeCCCHHHHHHh-------cCCc
Q 022313 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL---LGADK-F--VVSSDLEQMKAL-------GKSL 245 (299)
Q Consensus 180 ~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~---~g~~~-v--~~~~~~~~~~~~-------~~~~ 245 (299)
+.++++|.|+ |.+|...++.+...|++|+++.++.++.+.+.++ .+... + .|..+.+.+.++ .++.
T Consensus 9 ~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 88 (274)
T PRK07775 9 DRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGEI 88 (274)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence 4568999998 9999999999988999999999887665544322 23322 1 244444443322 2578
Q ss_pred cEEEEcCCC
Q 022313 246 DFIIDTASG 254 (299)
Q Consensus 246 d~v~d~~g~ 254 (299)
|++|.+.|.
T Consensus 89 d~vi~~Ag~ 97 (274)
T PRK07775 89 EVLVSGAGD 97 (274)
T ss_pred CEEEECCCc
Confidence 999998874
No 440
>PRK06114 short chain dehydrogenase; Provisional
Probab=95.50 E-value=0.17 Score=43.27 Aligned_cols=75 Identities=17% Similarity=0.164 Sum_probs=50.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCch-HHHHHHH---hcCCC-EEE--eCCCHHHHHHh-------cCC
Q 022313 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTS-KKEEALS---LLGAD-KFV--VSSDLEQMKAL-------GKS 244 (299)
Q Consensus 180 ~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~-~~~~~~~---~~g~~-~v~--~~~~~~~~~~~-------~~~ 244 (299)
+++++||.|+ +++|...++.+...|++|++++++++ ..+.+.+ ..+.. ..+ |..+.+.+.++ .++
T Consensus 7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~ 86 (254)
T PRK06114 7 DGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELGA 86 (254)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 5789999987 89999999999999999999998754 2233322 22321 122 33344333322 267
Q ss_pred ccEEEEcCCC
Q 022313 245 LDFIIDTASG 254 (299)
Q Consensus 245 ~d~v~d~~g~ 254 (299)
+|+++.+.|.
T Consensus 87 id~li~~ag~ 96 (254)
T PRK06114 87 LTLAVNAAGI 96 (254)
T ss_pred CCEEEECCCC
Confidence 8999999984
No 441
>PRK08219 short chain dehydrogenase; Provisional
Probab=95.50 E-value=0.11 Score=43.53 Aligned_cols=72 Identities=15% Similarity=0.113 Sum_probs=50.6
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEE--eCCCHHHHHHhc---CCccEEEEcCCC
Q 022313 182 KSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFV--VSSDLEQMKALG---KSLDFIIDTASG 254 (299)
Q Consensus 182 ~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~--~~~~~~~~~~~~---~~~d~v~d~~g~ 254 (299)
+++||.|+ |.+|...+..+... .+|++++++.++.+.+.++...-+++ |..+.+.+.++. ++.|.++.+.|.
T Consensus 4 ~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag~ 81 (227)
T PRK08219 4 PTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAELPGATPFPVDLTDPEAIAAAVEQLGRLDVLVHNAGV 81 (227)
T ss_pred CEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHhccceEEecCCCCHHHHHHHHHhcCCCCEEEECCCc
Confidence 57999987 99999888877777 99999999987766664333222222 444455554432 379999999874
No 442
>PRK06953 short chain dehydrogenase; Provisional
Probab=95.48 E-value=0.12 Score=43.36 Aligned_cols=72 Identities=22% Similarity=0.269 Sum_probs=51.4
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCC-EEEeCCCHHHHHHh----c-CCccEEEEcCCC
Q 022313 182 KSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGAD-KFVVSSDLEQMKAL----G-KSLDFIIDTASG 254 (299)
Q Consensus 182 ~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~----~-~~~d~v~d~~g~ 254 (299)
++++|.|+ |.+|...++.+...|++|++++++.+..+++ +..+.. ...|-.+.+.+.++ . .++|+++.+.|.
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~-~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi~~ag~ 80 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAAL-QALGAEALALDVADPASVAGLAWKLDGEALDAAVYVAGV 80 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHH-HhccceEEEecCCCHHHHHHHHHHhcCCCCCEEEECCCc
Confidence 46889987 9999999998888899999999998777766 344533 22344444444332 2 468999998774
No 443
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.48 E-value=0.073 Score=45.08 Aligned_cols=74 Identities=26% Similarity=0.335 Sum_probs=50.1
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEE-eCCchHHHHHHHhc---CCC-EEE--eCCCHHHHHHh-------cCCc
Q 022313 181 GKSLGVIGL-GGLGHMAVKFGKAFGLNVTVL-STSTSKKEEALSLL---GAD-KFV--VSSDLEQMKAL-------GKSL 245 (299)
Q Consensus 181 g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~-~~~~~~~~~~~~~~---g~~-~v~--~~~~~~~~~~~-------~~~~ 245 (299)
++++||.|+ |.+|...+..+...|++++++ .++++..+.+.+.+ +.. .++ |..+.+.+.+. .+++
T Consensus 5 ~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (247)
T PRK05565 5 GKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFGKI 84 (247)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 468999988 999999998888889999998 88877665443332 221 122 34444443332 1479
Q ss_pred cEEEEcCCC
Q 022313 246 DFIIDTASG 254 (299)
Q Consensus 246 d~v~d~~g~ 254 (299)
|++|.+.|.
T Consensus 85 d~vi~~ag~ 93 (247)
T PRK05565 85 DILVNNAGI 93 (247)
T ss_pred CEEEECCCc
Confidence 999998874
No 444
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional
Probab=95.48 E-value=0.11 Score=50.79 Aligned_cols=92 Identities=16% Similarity=0.153 Sum_probs=70.1
Q ss_pred CEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEE-eCCCHHHHHHhc-CCccEEEEcCCCchhHH
Q 022313 182 KSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFV-VSSDLEQMKALG-KSLDFIIDTASGDHPFD 259 (299)
Q Consensus 182 ~~vlI~G~g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~-~~~~~~~~~~~~-~~~d~v~d~~g~~~~~~ 259 (299)
+.|+|.|.|.+|+..++.++..|.++++++.++++.+.+ ++.|...+. |..+++.+++.+ ..+|.++-++++.....
T Consensus 401 ~~vII~G~Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~-~~~g~~v~~GDat~~~~L~~agi~~A~~vv~~~~d~~~n~ 479 (601)
T PRK03659 401 PQVIIVGFGRFGQVIGRLLMANKMRITVLERDISAVNLM-RKYGYKVYYGDATQLELLRAAGAEKAEAIVITCNEPEDTM 479 (601)
T ss_pred CCEEEecCchHHHHHHHHHHhCCCCEEEEECCHHHHHHH-HhCCCeEEEeeCCCHHHHHhcCCccCCEEEEEeCCHHHHH
Confidence 578999999999999999999999999999999999988 577854443 555667777665 78999999999865222
Q ss_pred H---HHHhcccCcEEEEE
Q 022313 260 A---YMSLLKVAGVYVLV 274 (299)
Q Consensus 260 ~---~~~~l~~~G~~v~~ 274 (299)
. ..+...|+-+++.-
T Consensus 480 ~i~~~~r~~~p~~~IiaR 497 (601)
T PRK03659 480 KIVELCQQHFPHLHILAR 497 (601)
T ss_pred HHHHHHHHHCCCCeEEEE
Confidence 2 23445566666543
No 445
>PRK08303 short chain dehydrogenase; Provisional
Probab=95.47 E-value=0.1 Score=46.38 Aligned_cols=74 Identities=30% Similarity=0.243 Sum_probs=49.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCc----------hHHHHHH---HhcCCCE-E--EeCCCHHHHHHh-
Q 022313 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTST----------SKKEEAL---SLLGADK-F--VVSSDLEQMKAL- 241 (299)
Q Consensus 180 ~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~----------~~~~~~~---~~~g~~~-v--~~~~~~~~~~~~- 241 (299)
++++++|.|+ +++|.+.++.+...|++|++++++. ++.+.+. +..|... . .|..+.+.++.+
T Consensus 7 ~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~ 86 (305)
T PRK08303 7 RGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRALV 86 (305)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHH
Confidence 5789999988 8999999999999999999998873 3333332 2334221 1 233444443322
Q ss_pred ------cCCccEEEEcC-C
Q 022313 242 ------GKSLDFIIDTA-S 253 (299)
Q Consensus 242 ------~~~~d~v~d~~-g 253 (299)
.+++|++++++ |
T Consensus 87 ~~~~~~~g~iDilVnnA~g 105 (305)
T PRK08303 87 ERIDREQGRLDILVNDIWG 105 (305)
T ss_pred HHHHHHcCCccEEEECCcc
Confidence 25789999988 5
No 446
>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=95.47 E-value=0.061 Score=43.15 Aligned_cols=46 Identities=20% Similarity=0.184 Sum_probs=40.9
Q ss_pred CCCEEEEEcCC-hHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcC
Q 022313 180 PGKSLGVIGLG-GLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLG 225 (299)
Q Consensus 180 ~g~~vlI~G~g-~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g 225 (299)
.|..|++.|+| ++|...++-+...|++|+++.|+++.+..+.++..
T Consensus 6 aG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~p 52 (245)
T KOG1207|consen 6 AGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKETP 52 (245)
T ss_pred cceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhCC
Confidence 67889999985 89999999999999999999999999998876655
No 447
>PTZ00098 phosphoethanolamine N-methyltransferase; Provisional
Probab=95.47 E-value=0.13 Score=44.64 Aligned_cols=105 Identities=15% Similarity=0.162 Sum_probs=66.3
Q ss_pred HhhhccCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCC-CEE-EeCCCHHHHHHhcCCccEE
Q 022313 171 PMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGA-DKF-VVSSDLEQMKALGKSLDFI 248 (299)
Q Consensus 171 al~~~~~~~~g~~vlI~G~g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~-~~v-~~~~~~~~~~~~~~~~d~v 248 (299)
++... .++++.+||=+|+|. |..+..+++..+++|+.++.+++..+.+.+.+.. ..+ +...+.....-..+.||+|
T Consensus 44 ~l~~l-~l~~~~~VLDiGcG~-G~~a~~la~~~~~~v~giD~s~~~~~~a~~~~~~~~~i~~~~~D~~~~~~~~~~FD~V 121 (263)
T PTZ00098 44 ILSDI-ELNENSKVLDIGSGL-GGGCKYINEKYGAHVHGVDICEKMVNIAKLRNSDKNKIEFEANDILKKDFPENTFDMI 121 (263)
T ss_pred HHHhC-CCCCCCEEEEEcCCC-ChhhHHHHhhcCCEEEEEECCHHHHHHHHHHcCcCCceEEEECCcccCCCCCCCeEEE
Confidence 34444 348899999899863 5556677777788999999998888877554432 111 1111111111112579999
Q ss_pred EEcC-----C--C-chhHHHHHHhcccCcEEEEEcCC
Q 022313 249 IDTA-----S--G-DHPFDAYMSLLKVAGVYVLVGFP 277 (299)
Q Consensus 249 ~d~~-----g--~-~~~~~~~~~~l~~~G~~v~~g~~ 277 (299)
+..- . . ...++.+.+.|+|+|+++.....
T Consensus 122 ~s~~~l~h~~~~d~~~~l~~i~r~LkPGG~lvi~d~~ 158 (263)
T PTZ00098 122 YSRDAILHLSYADKKKLFEKCYKWLKPNGILLITDYC 158 (263)
T ss_pred EEhhhHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEec
Confidence 8621 1 1 23577788999999999987544
No 448
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=95.45 E-value=0.15 Score=43.67 Aligned_cols=74 Identities=19% Similarity=0.115 Sum_probs=50.4
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHh----cCCC--EEE--eCCCHHHHHHh-------cCC
Q 022313 181 GKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL----LGAD--KFV--VSSDLEQMKAL-------GKS 244 (299)
Q Consensus 181 g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~----~g~~--~v~--~~~~~~~~~~~-------~~~ 244 (299)
++++||.|+ |.+|...++.+...|++|++++++.++.+...++ .+.. +.+ |..+.+.+..+ .++
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~ 81 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGR 81 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 468999988 8999999999998999999999987766554322 2211 122 33343333221 257
Q ss_pred ccEEEEcCCC
Q 022313 245 LDFIIDTASG 254 (299)
Q Consensus 245 ~d~v~d~~g~ 254 (299)
+|+++.+.|.
T Consensus 82 id~vv~~ag~ 91 (259)
T PRK12384 82 VDLLVYNAGI 91 (259)
T ss_pred CCEEEECCCc
Confidence 8999999873
No 449
>PLN02476 O-methyltransferase
Probab=95.44 E-value=0.27 Score=42.96 Aligned_cols=99 Identities=19% Similarity=0.226 Sum_probs=65.7
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHC--CCeEEEEeCCchHHHHHH---HhcCCC---EEEeCCCHHHHHHh-----cCC
Q 022313 178 NQPGKSLGVIGLGGLGHMAVKFGKAF--GLNVTVLSTSTSKKEEAL---SLLGAD---KFVVSSDLEQMKAL-----GKS 244 (299)
Q Consensus 178 ~~~g~~vlI~G~g~~G~~a~~~a~~~--g~~v~~~~~~~~~~~~~~---~~~g~~---~v~~~~~~~~~~~~-----~~~ 244 (299)
..+.++||=+|.+ +|..++.+|+.. +.+++.++.+++..+.++ ++.|.. .++..+..+.++++ .+.
T Consensus 116 ~~~ak~VLEIGT~-tGySal~lA~al~~~G~V~TiE~d~e~~~~Ar~n~~~aGl~~~I~li~GdA~e~L~~l~~~~~~~~ 194 (278)
T PLN02476 116 ILGAERCIEVGVY-TGYSSLAVALVLPESGCLVACERDSNSLEVAKRYYELAGVSHKVNVKHGLAAESLKSMIQNGEGSS 194 (278)
T ss_pred hcCCCeEEEecCC-CCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcccCCC
Confidence 3677899999873 356666666655 347999999988766553 344643 23334434555544 257
Q ss_pred ccEEEEcCCCc---hhHHHHHHhcccCcEEEEEcCC
Q 022313 245 LDFIIDTASGD---HPFDAYMSLLKVAGVYVLVGFP 277 (299)
Q Consensus 245 ~d~v~d~~g~~---~~~~~~~~~l~~~G~~v~~g~~ 277 (299)
||+||--.... ..++.+++.++++|.++.=-..
T Consensus 195 FD~VFIDa~K~~Y~~y~e~~l~lL~~GGvIV~DNvL 230 (278)
T PLN02476 195 YDFAFVDADKRMYQDYFELLLQLVRVGGVIVMDNVL 230 (278)
T ss_pred CCEEEECCCHHHHHHHHHHHHHhcCCCcEEEEecCc
Confidence 99998766643 2578889999999998754433
No 450
>PRK05597 molybdopterin biosynthesis protein MoeB; Validated
Probab=95.44 E-value=0.12 Score=46.98 Aligned_cols=77 Identities=27% Similarity=0.343 Sum_probs=49.3
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCch-------------------HHHHHH---HhcCCC-EEEe---C
Q 022313 180 PGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTS-------------------KKEEAL---SLLGAD-KFVV---S 232 (299)
Q Consensus 180 ~g~~vlI~G~g~~G~~a~~~a~~~g~-~v~~~~~~~~-------------------~~~~~~---~~~g~~-~v~~---~ 232 (299)
...+|+|+|+|++|..+++.+...|. ++++++.+.- +.+.++ +++..+ .+-. .
T Consensus 27 ~~~~VlivG~GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~v~~~~~~ 106 (355)
T PRK05597 27 FDAKVAVIGAGGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPDVKVTVSVRR 106 (355)
T ss_pred hCCeEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCCcEEEEEEee
Confidence 44789999999999999999999998 7887775531 111111 223321 1111 1
Q ss_pred CCHHHHHHhcCCccEEEEcCCCch
Q 022313 233 SDLEQMKALGKSLDFIIDTASGDH 256 (299)
Q Consensus 233 ~~~~~~~~~~~~~d~v~d~~g~~~ 256 (299)
-+.+...++-+++|+|+||+.+..
T Consensus 107 i~~~~~~~~~~~~DvVvd~~d~~~ 130 (355)
T PRK05597 107 LTWSNALDELRDADVILDGSDNFD 130 (355)
T ss_pred cCHHHHHHHHhCCCEEEECCCCHH
Confidence 122333444578999999999866
No 451
>PRK13302 putative L-aspartate dehydrogenase; Provisional
Probab=95.41 E-value=0.14 Score=44.70 Aligned_cols=87 Identities=16% Similarity=0.211 Sum_probs=56.8
Q ss_pred CEEEEEcCChHHHHHHHHHHH--CCCeEE-EEeCCchHHHHHHHhcCCCEEEeCCCHHHHHHhcCCccEEEEcCCCchhH
Q 022313 182 KSLGVIGLGGLGHMAVKFGKA--FGLNVT-VLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHPF 258 (299)
Q Consensus 182 ~~vlI~G~g~~G~~a~~~a~~--~g~~v~-~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~v~d~~g~~~~~ 258 (299)
-+|.|+|.|.+|...++.+.. .+.++. +.++++++.+.+.+++|..... .+. .++....|+|++|++.....
T Consensus 7 irIGIIG~G~IG~~~a~~L~~~~~~~el~aV~dr~~~~a~~~a~~~g~~~~~--~~~---eell~~~D~Vvi~tp~~~h~ 81 (271)
T PRK13302 7 LRVAIAGLGAIGKAIAQALDRGLPGLTLSAVAVRDPQRHADFIWGLRRPPPV--VPL---DQLATHADIVVEAAPASVLR 81 (271)
T ss_pred eEEEEECccHHHHHHHHHHHhcCCCeEEEEEECCCHHHHHHHHHhcCCCccc--CCH---HHHhcCCCEEEECCCcHHHH
Confidence 578999999999887776665 356665 5566767766665677743322 122 22334579999999877655
Q ss_pred HHHHHhcccCcEEEE
Q 022313 259 DAYMSLLKVAGVYVL 273 (299)
Q Consensus 259 ~~~~~~l~~~G~~v~ 273 (299)
+....+++.+-.++.
T Consensus 82 e~~~~aL~aGk~Vi~ 96 (271)
T PRK13302 82 AIVEPVLAAGKKAIV 96 (271)
T ss_pred HHHHHHHHcCCcEEE
Confidence 555667766654543
No 452
>PRK08264 short chain dehydrogenase; Validated
Probab=95.41 E-value=0.13 Score=43.50 Aligned_cols=71 Identities=21% Similarity=0.240 Sum_probs=50.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCC-eEEEEeCCchHHHHHHHhcCCC-EE--EeCCCHHHHHHh---cCCccEEEEc
Q 022313 180 PGKSLGVIGL-GGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGAD-KF--VVSSDLEQMKAL---GKSLDFIIDT 251 (299)
Q Consensus 180 ~g~~vlI~G~-g~~G~~a~~~a~~~g~-~v~~~~~~~~~~~~~~~~~g~~-~v--~~~~~~~~~~~~---~~~~d~v~d~ 251 (299)
.+++++|.|+ |.+|...++.+...|+ +|++++++.++.+. .+.. .+ .+..+.+.+.++ .+.+|++|.+
T Consensus 5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ 80 (238)
T PRK08264 5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD----LGPRVVPLQLDVTDPASVAAAAEAASDVTILVNN 80 (238)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh----cCCceEEEEecCCCHHHHHHHHHhcCCCCEEEEC
Confidence 5678999987 9999999999999999 99999998765442 2211 12 244444444433 2468999999
Q ss_pred CCC
Q 022313 252 ASG 254 (299)
Q Consensus 252 ~g~ 254 (299)
.|.
T Consensus 81 ag~ 83 (238)
T PRK08264 81 AGI 83 (238)
T ss_pred CCc
Confidence 886
No 453
>PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.41 E-value=0.14 Score=44.71 Aligned_cols=95 Identities=18% Similarity=0.177 Sum_probs=70.9
Q ss_pred ccchhhHHHHHHhhhccCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEEeCCCHHHH
Q 022313 160 PLLCAGITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQM 238 (299)
Q Consensus 160 ~~~~~~~ta~~al~~~~~~~~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 238 (299)
.+||...+....++....--.|+++.|+|. ..+|.-...++...+++|++.-+....++
T Consensus 134 ~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~aTVtichs~T~~l~-------------------- 193 (287)
T PRK14173 134 LEPCTPAGVVRLLKHYGIPLAGKEVVVVGRSNIVGKPLAALLLREDATVTLAHSKTQDLP-------------------- 193 (287)
T ss_pred CCCCCHHHHHHHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEeCCCCCCHH--------------------
Confidence 467776776766766554358999999997 78999999999999999987764433222
Q ss_pred HHhcCCccEEEEcCCCchhHHHHHHhcccCcEEEEEcCC
Q 022313 239 KALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP 277 (299)
Q Consensus 239 ~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~ 277 (299)
+..+..|+|+-++|.+..+ --+.++++..++++|..
T Consensus 194 -~~~~~ADIvIsAvGkp~~i--~~~~vk~GavVIDVGin 229 (287)
T PRK14173 194 -AVTRRADVLVVAVGRPHLI--TPEMVRPGAVVVDVGIN 229 (287)
T ss_pred -HHHhhCCEEEEecCCcCcc--CHHHcCCCCEEEEccCc
Confidence 2335688999999987633 35778999999999876
No 454
>COG0334 GdhA Glutamate dehydrogenase/leucine dehydrogenase [Amino acid transport and metabolism]
Probab=95.41 E-value=0.24 Score=45.23 Aligned_cols=129 Identities=16% Similarity=0.175 Sum_probs=79.3
Q ss_pred CcccccccchhhHHHHHHhhhccCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCch------------------
Q 022313 154 PLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTS------------------ 215 (299)
Q Consensus 154 ~~~~aa~~~~~~~ta~~al~~~~~~~~g~~vlI~G~g~~G~~a~~~a~~~g~~v~~~~~~~~------------------ 215 (299)
...+|-...+.+.+- .+++....--+|.+|.|.|.|.+|+.+++.+...|++|++++.+..
T Consensus 181 ~r~~aTg~Gv~~~~~-~a~~~~g~~l~G~rVaVQG~GNVg~~aa~~l~~~GAkvva~sds~g~i~~~~Gld~~~l~~~~~ 259 (411)
T COG0334 181 GRSEATGYGVFYAIR-EALKALGDDLEGARVAVQGFGNVGQYAAEKLHELGAKVVAVSDSKGGIYDEDGLDVEALLELKE 259 (411)
T ss_pred CCCcccceehHHHHH-HHHHHcCCCcCCCEEEEECccHHHHHHHHHHHHcCCEEEEEEcCCCceecCCCCCHHHHHHHhh
Confidence 334455555554443 4454444314899999999999999999999999999999998877
Q ss_pred HHHHHHHhcCCCEEEeCCCH-------------------HHHHHhcCCccEEEEcCCCchhHHHHHHhcccCcEEEEEcC
Q 022313 216 KKEEALSLLGADKFVVSSDL-------------------EQMKALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGF 276 (299)
Q Consensus 216 ~~~~~~~~~g~~~v~~~~~~-------------------~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~ 276 (299)
+...+.+.+|++.+-+ .+. +.+.. =...+|.+.+.++. ...+.+.+...|.++.-..
T Consensus 260 ~~~~v~~~~ga~~i~~-~e~~~~~cDIl~PcA~~n~I~~~na~~--l~ak~V~EgAN~P~-t~eA~~i~~erGIl~~PD~ 335 (411)
T COG0334 260 RRGSVAEYAGAEYITN-EELLEVDCDILIPCALENVITEDNADQ--LKAKIVVEGANGPT-TPEADEILLERGILVVPDI 335 (411)
T ss_pred hhhhHHhhcCceEccc-cccccccCcEEcccccccccchhhHHH--hhhcEEEeccCCCC-CHHHHHHHHHCCCEEcChh
Confidence 4445544445433321 110 11111 13568888888876 5666666667776654443
Q ss_pred C---CceeeChhhh
Q 022313 277 P---SKVKFSPASL 287 (299)
Q Consensus 277 ~---~~~~~~~~~l 287 (299)
. +.+..+-.++
T Consensus 336 laNAGGV~vS~~E~ 349 (411)
T COG0334 336 LANAGGVIVSYLEW 349 (411)
T ss_pred hccCcCeeeehHHH
Confidence 3 4444444443
No 455
>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]
Probab=95.37 E-value=0.12 Score=43.71 Aligned_cols=98 Identities=18% Similarity=0.249 Sum_probs=59.5
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCch------HHHHH-HHhcC---------------C-CEEEeCC--
Q 022313 180 PGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTS------KKEEA-LSLLG---------------A-DKFVVSS-- 233 (299)
Q Consensus 180 ~g~~vlI~G~g~~G~~a~~~a~~~g~-~v~~~~~~~~------~~~~~-~~~~g---------------~-~~v~~~~-- 233 (299)
+...|+|+|.|++|-+++..+.+.|. ++.+++-++- +.-.+ ....| . -++...+
T Consensus 29 ~~~~V~VvGiGGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~~~~~f 108 (263)
T COG1179 29 KQAHVCVVGIGGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVTAINDF 108 (263)
T ss_pred hhCcEEEEecCchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEeehHhh
Confidence 34679999999999999999999998 7887764422 11111 01122 1 1121111
Q ss_pred -CHHHHHHh-cCCccEEEEcCCCchh-HHHHHHhcccCcEEEEEcCC
Q 022313 234 -DLEQMKAL-GKSLDFIIDTASGDHP-FDAYMSLLKVAGVYVLVGFP 277 (299)
Q Consensus 234 -~~~~~~~~-~~~~d~v~d~~g~~~~-~~~~~~~l~~~G~~v~~g~~ 277 (299)
+++.+.++ ..+||+|+||...-.+ ...+..|.+.+=.++..+..
T Consensus 109 ~t~en~~~~~~~~~DyvIDaiD~v~~Kv~Li~~c~~~ki~vIss~Ga 155 (263)
T COG1179 109 ITEENLEDLLSKGFDYVIDAIDSVRAKVALIAYCRRNKIPVISSMGA 155 (263)
T ss_pred hCHhHHHHHhcCCCCEEEEchhhhHHHHHHHHHHHHcCCCEEeeccc
Confidence 23444444 4689999999998653 23334466666666666433
No 456
>PRK05650 short chain dehydrogenase; Provisional
Probab=95.37 E-value=0.089 Score=45.53 Aligned_cols=72 Identities=26% Similarity=0.355 Sum_probs=49.8
Q ss_pred EEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhc---CCCE-EE--eCCCHHHHHHh-------cCCccEE
Q 022313 183 SLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL---GADK-FV--VSSDLEQMKAL-------GKSLDFI 248 (299)
Q Consensus 183 ~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~---g~~~-v~--~~~~~~~~~~~-------~~~~d~v 248 (299)
+++|.|+ |++|...+..+...|++|++++++.++.+.+.+++ +.+. ++ |..+.+.+.++ .+++|++
T Consensus 2 ~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~l 81 (270)
T PRK05650 2 RVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDVI 81 (270)
T ss_pred EEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 6899988 99999999988889999999999887766543322 3222 12 33333333222 2579999
Q ss_pred EEcCCC
Q 022313 249 IDTASG 254 (299)
Q Consensus 249 ~d~~g~ 254 (299)
+.+.|.
T Consensus 82 I~~ag~ 87 (270)
T PRK05650 82 VNNAGV 87 (270)
T ss_pred EECCCC
Confidence 999884
No 457
>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.37 E-value=0.16 Score=44.31 Aligned_cols=95 Identities=16% Similarity=0.177 Sum_probs=70.8
Q ss_pred ccchhhHHHHHHhhhccCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEEeCCCHHHH
Q 022313 160 PLLCAGITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQM 238 (299)
Q Consensus 160 ~~~~~~~ta~~al~~~~~~~~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 238 (299)
.+||...+....++...---.|+++.|+|. ..+|.=.+.++...+++|++.-+....++
T Consensus 135 ~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~atVtichs~T~~l~-------------------- 194 (282)
T PRK14169 135 VVASTPYGIMALLDAYDIDVAGKRVVIVGRSNIVGRPLAGLMVNHDATVTIAHSKTRNLK-------------------- 194 (282)
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEECCCCCCHH--------------------
Confidence 467777776766766554468999999997 68999999999999999987754322222
Q ss_pred HHhcCCccEEEEcCCCchhHHHHHHhcccCcEEEEEcCC
Q 022313 239 KALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP 277 (299)
Q Consensus 239 ~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~ 277 (299)
+..+..|+++-++|.+..+ --++++++..++++|..
T Consensus 195 -~~~~~ADIvI~AvG~p~~i--~~~~vk~GavVIDvGin 230 (282)
T PRK14169 195 -QLTKEADILVVAVGVPHFI--GADAVKPGAVVIDVGIS 230 (282)
T ss_pred -HHHhhCCEEEEccCCcCcc--CHHHcCCCcEEEEeecc
Confidence 2335688999999988733 24689999999999876
No 458
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=95.37 E-value=0.11 Score=43.83 Aligned_cols=75 Identities=24% Similarity=0.271 Sum_probs=51.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHh---cCCCE-E--EeCCCHHHHHHh-------cCCc
Q 022313 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL---LGADK-F--VVSSDLEQMKAL-------GKSL 245 (299)
Q Consensus 180 ~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~---~g~~~-v--~~~~~~~~~~~~-------~~~~ 245 (299)
+++++||.|+ |.+|...++.+...|.+|+++.+++++.+.+... .+... + .|..+.+.+... ..++
T Consensus 4 ~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 83 (246)
T PRK05653 4 QGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFGAL 83 (246)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 4578999998 9999999999988999999999998775544322 33222 2 244444333221 2568
Q ss_pred cEEEEcCCC
Q 022313 246 DFIIDTASG 254 (299)
Q Consensus 246 d~v~d~~g~ 254 (299)
|.++.+.|.
T Consensus 84 d~vi~~ag~ 92 (246)
T PRK05653 84 DILVNNAGI 92 (246)
T ss_pred CEEEECCCc
Confidence 999999875
No 459
>PRK11880 pyrroline-5-carboxylate reductase; Reviewed
Probab=95.37 E-value=0.11 Score=44.97 Aligned_cols=78 Identities=19% Similarity=0.224 Sum_probs=54.7
Q ss_pred EEEEEcCChHHHHHHHHHHHCC---CeEEEEeCCchHHHHHHHhcCCCEEEeCCCHHHHHHhcCCccEEEEcCCCchhHH
Q 022313 183 SLGVIGLGGLGHMAVKFGKAFG---LNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHPFD 259 (299)
Q Consensus 183 ~vlI~G~g~~G~~a~~~a~~~g---~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~ 259 (299)
+|.|+|.|.+|...+..+...+ .+|+++++++++.+.+.+++|.. +. .+. .+.....|+||-++.... +.
T Consensus 4 ~I~iIG~G~mG~~la~~l~~~g~~~~~v~v~~r~~~~~~~~~~~~g~~-~~--~~~---~~~~~~advVil~v~~~~-~~ 76 (267)
T PRK11880 4 KIGFIGGGNMASAIIGGLLASGVPAKDIIVSDPSPEKRAALAEEYGVR-AA--TDN---QEAAQEADVVVLAVKPQV-ME 76 (267)
T ss_pred EEEEEechHHHHHHHHHHHhCCCCcceEEEEcCCHHHHHHHHHhcCCe-ec--CCh---HHHHhcCCEEEEEcCHHH-HH
Confidence 5889999999998888877777 58999999988888775556642 21 111 122256789988887665 66
Q ss_pred HHHHhccc
Q 022313 260 AYMSLLKV 267 (299)
Q Consensus 260 ~~~~~l~~ 267 (299)
..++.+++
T Consensus 77 ~v~~~l~~ 84 (267)
T PRK11880 77 EVLSELKG 84 (267)
T ss_pred HHHHHHHh
Confidence 66655554
No 460
>PLN02516 methylenetetrahydrofolate dehydrogenase (NADP+)
Probab=95.37 E-value=0.17 Score=44.45 Aligned_cols=96 Identities=19% Similarity=0.161 Sum_probs=71.2
Q ss_pred cccchhhHHHHHHhhhccCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEEeCCCHHH
Q 022313 159 APLLCAGITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQ 237 (299)
Q Consensus 159 a~~~~~~~ta~~al~~~~~~~~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~ 237 (299)
+.+||...+....++....--.|++++|+|. ..+|.=...++...+++|++.-.....+
T Consensus 145 ~~~PcTp~avi~lL~~~~i~l~Gk~vvVIGRS~iVGkPla~lL~~~~ATVtvchs~T~nl-------------------- 204 (299)
T PLN02516 145 LFLPCTPKGCLELLSRSGIPIKGKKAVVVGRSNIVGLPVSLLLLKADATVTVVHSRTPDP-------------------- 204 (299)
T ss_pred CCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCH--------------------
Confidence 3567777777777766554367999999997 6899999999998999998885432222
Q ss_pred HHHhcCCccEEEEcCCCchhHHHHHHhcccCcEEEEEcCC
Q 022313 238 MKALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP 277 (299)
Q Consensus 238 ~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~ 277 (299)
.+..+..|+++-++|.+..+ -.++++++..++++|..
T Consensus 205 -~~~~~~ADIvv~AvGk~~~i--~~~~vk~gavVIDvGin 241 (299)
T PLN02516 205 -ESIVREADIVIAAAGQAMMI--KGDWIKPGAAVIDVGTN 241 (299)
T ss_pred -HHHHhhCCEEEEcCCCcCcc--CHHHcCCCCEEEEeecc
Confidence 22336688999999886522 25688999999999866
No 461
>smart00846 Gp_dh_N Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain. GAPDH is a tetrameric NAD-binding enzyme involved in glycolysis and glyconeogenesis. N-terminal domain is a Rossmann NAD(P) binding fold.
Probab=95.36 E-value=0.24 Score=39.06 Aligned_cols=95 Identities=15% Similarity=0.265 Sum_probs=59.1
Q ss_pred EEEEEcCChHHHHHHHHHHHC-CCeEEEEeC--CchHHHHHHH---hcCC--C----------------EEEeCCCHHHH
Q 022313 183 SLGVIGLGGLGHMAVKFGKAF-GLNVTVLST--STSKKEEALS---LLGA--D----------------KFVVSSDLEQM 238 (299)
Q Consensus 183 ~vlI~G~g~~G~~a~~~a~~~-g~~v~~~~~--~~~~~~~~~~---~~g~--~----------------~v~~~~~~~~~ 238 (299)
+|.|+|.|.+|...++.+... +.++.++.. +.+....+.+ ..|. . +++...++..+
T Consensus 2 kv~I~G~GriGr~v~~~~~~~~~~~lvai~d~~~~~~~a~ll~~Ds~hg~~~~~v~~~~~~l~i~g~~i~~~~~~~p~~~ 81 (149)
T smart00846 2 KVGINGFGRIGRLVLRALLERPDIEVVAINDLTDPETLAHLLKYDSVHGRFPGEVEVDEDGLIVNGKKIKVLAERDPANL 81 (149)
T ss_pred EEEEECcCHHHHHHHHHHHhCCCCEEEEeecCCCHHHHHHHhcccCCCCCCCCcEEEeCCEEEECCEEEEEEecCChHHC
Confidence 578999999999988887744 556665543 3334444432 1231 1 11222334444
Q ss_pred HHhcCCccEEEEcCCCchhHHHHHHhcccCcEEEEEcCC
Q 022313 239 KALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP 277 (299)
Q Consensus 239 ~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~ 277 (299)
.|-.-++|+|+||+|.-...+.+...+..+-+-|.++.+
T Consensus 82 ~w~~~gvDiVie~tG~f~~~~~~~~hl~~GakkViisap 120 (149)
T smart00846 82 PWKELGVDIVVECTGKFTTREKASAHLKAGAKKVIISAP 120 (149)
T ss_pred cccccCCeEEEeccccccchHHHHHHHHcCCCEEEeCCC
Confidence 444568999999988755456666778777677777666
No 462
>PRK08328 hypothetical protein; Provisional
Probab=95.36 E-value=0.16 Score=43.27 Aligned_cols=83 Identities=19% Similarity=0.307 Sum_probs=51.5
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCchHHHHH-----------------------HHhcCCCEEEeC---
Q 022313 180 PGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEA-----------------------LSLLGADKFVVS--- 232 (299)
Q Consensus 180 ~g~~vlI~G~g~~G~~a~~~a~~~g~-~v~~~~~~~~~~~~~-----------------------~~~~g~~~v~~~--- 232 (299)
.+.+|+|+|+|++|..++..+...|. ++++++.+.-+...+ .+++..+--++.
T Consensus 26 ~~~~VlIiG~GGlGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~~k~~~a~~~l~~~np~v~v~~~~~ 105 (231)
T PRK08328 26 KKAKVAVVGVGGLGSPVAYYLAAAGVGRILLIDEQTPELSNLNRQILHWEEDLGKNPKPLSAKWKLERFNSDIKIETFVG 105 (231)
T ss_pred hCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCccChhhhccccccChhhcCchHHHHHHHHHHHHhCCCCEEEEEec
Confidence 44679999999999999999999998 777776443222111 122332211111
Q ss_pred -CCHHHHHHhcCCccEEEEcCCCchhHHHHHH
Q 022313 233 -SDLEQMKALGKSLDFIIDTASGDHPFDAYMS 263 (299)
Q Consensus 233 -~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~ 263 (299)
-+.+.+.++-+++|+|+||+.+.. .+..+.
T Consensus 106 ~~~~~~~~~~l~~~D~Vid~~d~~~-~r~~l~ 136 (231)
T PRK08328 106 RLSEENIDEVLKGVDVIVDCLDNFE-TRYLLD 136 (231)
T ss_pred cCCHHHHHHHHhcCCEEEECCCCHH-HHHHHH
Confidence 112333444578999999999866 444444
No 463
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=95.36 E-value=0.094 Score=46.72 Aligned_cols=75 Identities=21% Similarity=0.160 Sum_probs=50.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHH--h-cCC---CEEE--eCCCHHHHHHhcCCccEEEE
Q 022313 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALS--L-LGA---DKFV--VSSDLEQMKALGKSLDFIID 250 (299)
Q Consensus 180 ~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~--~-~g~---~~v~--~~~~~~~~~~~~~~~d~v~d 250 (299)
.+++|||.|+ |.+|...+..+...|.+|++++++..+.+.+.+ + .+. -+++ +..+.+.+.++-.++|+||.
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih 83 (322)
T PLN02986 4 GGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIEGCDAVFH 83 (322)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHhCCCEEEE
Confidence 4689999998 999999999888889999988887654333211 1 111 1222 33344455555567999999
Q ss_pred cCCC
Q 022313 251 TASG 254 (299)
Q Consensus 251 ~~g~ 254 (299)
+++.
T Consensus 84 ~A~~ 87 (322)
T PLN02986 84 TASP 87 (322)
T ss_pred eCCC
Confidence 8873
No 464
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=95.35 E-value=0.1 Score=48.92 Aligned_cols=71 Identities=25% Similarity=0.352 Sum_probs=49.9
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCc-hHH----HHHHHhcCCCEEEeCCCHHHHHHhcCCccEEEEcCCC
Q 022313 180 PGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTST-SKK----EEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASG 254 (299)
Q Consensus 180 ~g~~vlI~G~g~~G~~a~~~a~~~g~~v~~~~~~~-~~~----~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~v~d~~g~ 254 (299)
.+++++|+|+|.+|+.++..+...|++|+++++.. +.. +++ ++.|.. ++..+..+ +..+++|+|+.+.|-
T Consensus 4 ~~k~v~iiG~g~~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l-~~~~~~-~~~~~~~~---~~~~~~d~vv~~~g~ 78 (450)
T PRK14106 4 KGKKVLVVGAGVSGLALAKFLKKLGAKVILTDEKEEDQLKEALEEL-GELGIE-LVLGEYPE---EFLEGVDLVVVSPGV 78 (450)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHH-HhcCCE-EEeCCcch---hHhhcCCEEEECCCC
Confidence 46889999998899999999999999999999875 222 223 344544 32222222 233679999998885
Q ss_pred c
Q 022313 255 D 255 (299)
Q Consensus 255 ~ 255 (299)
.
T Consensus 79 ~ 79 (450)
T PRK14106 79 P 79 (450)
T ss_pred C
Confidence 3
No 465
>PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed
Probab=95.35 E-value=0.17 Score=42.31 Aligned_cols=95 Identities=22% Similarity=0.186 Sum_probs=60.5
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHh---cCCCE--EEeCCCHHHHHHhcCCccEEEEc
Q 022313 177 MNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL---LGADK--FVVSSDLEQMKALGKSLDFIIDT 251 (299)
Q Consensus 177 ~~~~g~~vlI~G~g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~---~g~~~--v~~~~~~~~~~~~~~~~d~v~d~ 251 (299)
.++++.+||-+|+|. |..+..+++.. .+++.++.+++..+.+.+. .+.+. +...+..+... ..+.||+|+..
T Consensus 75 ~~~~~~~VLeiG~Gs-G~~t~~la~~~-~~v~~vd~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~-~~~~fD~I~~~ 151 (212)
T PRK00312 75 ELKPGDRVLEIGTGS-GYQAAVLAHLV-RRVFSVERIKTLQWEAKRRLKQLGLHNVSVRHGDGWKGWP-AYAPFDRILVT 151 (212)
T ss_pred CCCCCCEEEEECCCc-cHHHHHHHHHh-CEEEEEeCCHHHHHHHHHHHHHCCCCceEEEECCcccCCC-cCCCcCEEEEc
Confidence 348889999998864 55555555553 4899999887776665443 34322 22222111111 12579999876
Q ss_pred CCCchhHHHHHHhcccCcEEEEE
Q 022313 252 ASGDHPFDAYMSLLKVAGVYVLV 274 (299)
Q Consensus 252 ~g~~~~~~~~~~~l~~~G~~v~~ 274 (299)
..-........+.|+++|+++..
T Consensus 152 ~~~~~~~~~l~~~L~~gG~lv~~ 174 (212)
T PRK00312 152 AAAPEIPRALLEQLKEGGILVAP 174 (212)
T ss_pred cCchhhhHHHHHhcCCCcEEEEE
Confidence 65555567788999999998765
No 466
>COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis]
Probab=95.34 E-value=0.22 Score=42.46 Aligned_cols=99 Identities=19% Similarity=0.197 Sum_probs=69.2
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHCCC--eEEEEeCCchHHHHHHHhc---CCCEEEeCCCHHHHHH--hcCCccEEE
Q 022313 177 MNQPGKSLGVIGLGGLGHMAVKFGKAFGL--NVTVLSTSTSKKEEALSLL---GADKFVVSSDLEQMKA--LGKSLDFII 249 (299)
Q Consensus 177 ~~~~g~~vlI~G~g~~G~~a~~~a~~~g~--~v~~~~~~~~~~~~~~~~~---g~~~v~~~~~~~~~~~--~~~~~d~v~ 249 (299)
.+.+|++|+=.|.|+ |.+++.+|+..|. +|+.+...++..+.+.+.+ |....+.... .++.+ ....||.+|
T Consensus 91 gi~pg~rVlEAGtGS-G~lt~~La~~vg~~G~v~tyE~r~d~~k~A~~Nl~~~~l~d~v~~~~-~Dv~~~~~~~~vDav~ 168 (256)
T COG2519 91 GISPGSRVLEAGTGS-GALTAYLARAVGPEGHVTTYEIREDFAKTARENLSEFGLGDRVTLKL-GDVREGIDEEDVDAVF 168 (256)
T ss_pred CCCCCCEEEEcccCc-hHHHHHHHHhhCCCceEEEEEecHHHHHHHHHHHHHhccccceEEEe-ccccccccccccCEEE
Confidence 349999999988764 7788888887764 9999999888777665444 4322111111 11111 124899998
Q ss_pred EcCCCch-hHHHHHHhcccCcEEEEEcCC
Q 022313 250 DTASGDH-PFDAYMSLLKVAGVYVLVGFP 277 (299)
Q Consensus 250 d~~g~~~-~~~~~~~~l~~~G~~v~~g~~ 277 (299)
--...+. .++.+.+.|+++|.++.+-.+
T Consensus 169 LDmp~PW~~le~~~~~Lkpgg~~~~y~P~ 197 (256)
T COG2519 169 LDLPDPWNVLEHVSDALKPGGVVVVYSPT 197 (256)
T ss_pred EcCCChHHHHHHHHHHhCCCcEEEEEcCC
Confidence 7777764 688899999999999988655
No 467
>PRK08226 short chain dehydrogenase; Provisional
Probab=95.34 E-value=0.16 Score=43.67 Aligned_cols=75 Identities=20% Similarity=0.216 Sum_probs=50.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHH--HhcCCC-EE--EeCCCHHHHHHh-------cCCcc
Q 022313 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEAL--SLLGAD-KF--VVSSDLEQMKAL-------GKSLD 246 (299)
Q Consensus 180 ~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~--~~~g~~-~v--~~~~~~~~~~~~-------~~~~d 246 (299)
++++++|.|+ |++|...++.+...|++|++++++++..+... .+.+.. .. .|..+.+.+.++ .++.|
T Consensus 5 ~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id 84 (263)
T PRK08226 5 TGKTALITGALQGIGEGIARVFARHGANLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRID 84 (263)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 4688999987 99999999999999999999998865333221 122322 11 234444443332 25789
Q ss_pred EEEEcCCC
Q 022313 247 FIIDTASG 254 (299)
Q Consensus 247 ~v~d~~g~ 254 (299)
+++.+.|.
T Consensus 85 ~vi~~ag~ 92 (263)
T PRK08226 85 ILVNNAGV 92 (263)
T ss_pred EEEECCCc
Confidence 99998883
No 468
>PRK00141 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=95.33 E-value=0.13 Score=48.62 Aligned_cols=72 Identities=14% Similarity=0.254 Sum_probs=50.3
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEEeCCCHHHHHHhcCCccEEEEcCCC
Q 022313 179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASG 254 (299)
Q Consensus 179 ~~g~~vlI~G~g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~v~d~~g~ 254 (299)
-.+++|+|+|.|..|.+++.+++..|+.|++.++.......+.+++|.......+..+.+ ..+|+|+-..|-
T Consensus 13 ~~~~~v~v~G~G~sG~a~a~~L~~~G~~V~~~D~~~~~~~~~l~~~gi~~~~~~~~~~~~----~~~d~vV~Spgi 84 (473)
T PRK00141 13 ELSGRVLVAGAGVSGRGIAAMLSELGCDVVVADDNETARHKLIEVTGVADISTAEASDQL----DSFSLVVTSPGW 84 (473)
T ss_pred ccCCeEEEEccCHHHHHHHHHHHHCCCEEEEECCChHHHHHHHHhcCcEEEeCCCchhHh----cCCCEEEeCCCC
Confidence 455679999999999999999999999999999765554443356676544322222222 357888876663
No 469
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.33 E-value=0.11 Score=44.10 Aligned_cols=75 Identities=25% Similarity=0.319 Sum_probs=49.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEE-EeCCchHHHHHHHh---cCCCE-E--EeCCCHHHHHHh-------cCC
Q 022313 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTV-LSTSTSKKEEALSL---LGADK-F--VVSSDLEQMKAL-------GKS 244 (299)
Q Consensus 180 ~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~-~~~~~~~~~~~~~~---~g~~~-v--~~~~~~~~~~~~-------~~~ 244 (299)
+++++||.|+ |.+|...+..+...|++|++ ..++.++.+.+.++ .+... . .|..+.+.+..+ .++
T Consensus 3 ~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (250)
T PRK08063 3 SGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFGR 82 (250)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4678999998 89999999999999998776 46666555443222 34321 2 233344433322 257
Q ss_pred ccEEEEcCCC
Q 022313 245 LDFIIDTASG 254 (299)
Q Consensus 245 ~d~v~d~~g~ 254 (299)
+|+++.+.|.
T Consensus 83 id~vi~~ag~ 92 (250)
T PRK08063 83 LDVFVNNAAS 92 (250)
T ss_pred CCEEEECCCC
Confidence 8999998874
No 470
>PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.33 E-value=0.17 Score=44.56 Aligned_cols=95 Identities=19% Similarity=0.200 Sum_probs=69.8
Q ss_pred ccchhhHHHHHHhhhccCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEEeCCCHHHH
Q 022313 160 PLLCAGITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQM 238 (299)
Q Consensus 160 ~~~~~~~ta~~al~~~~~~~~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 238 (299)
..||...+....++....--.|++++|+|. ..+|.-...++...+++|++.-+....++
T Consensus 137 ~~PcTp~aii~lL~~~~i~l~Gk~vvVIGrS~iVGkPla~lL~~~~atVtv~hs~T~~l~-------------------- 196 (297)
T PRK14186 137 LRSCTPAGVMRLLRSQQIDIAGKKAVVVGRSILVGKPLALMLLAANATVTIAHSRTQDLA-------------------- 196 (297)
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHH--------------------
Confidence 456666666666665554368999999997 68999999999999999988754433222
Q ss_pred HHhcCCccEEEEcCCCchhHHHHHHhcccCcEEEEEcCC
Q 022313 239 KALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP 277 (299)
Q Consensus 239 ~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~ 277 (299)
+..+..|+++-++|-+..+ --+.++++..++++|..
T Consensus 197 -~~~~~ADIvIsAvGkp~~i--~~~~ik~gavVIDvGin 232 (297)
T PRK14186 197 -SITREADILVAAAGRPNLI--GAEMVKPGAVVVDVGIH 232 (297)
T ss_pred -HHHhhCCEEEEccCCcCcc--CHHHcCCCCEEEEeccc
Confidence 2235688999999977632 25688899999999866
No 471
>PRK08628 short chain dehydrogenase; Provisional
Probab=95.32 E-value=0.15 Score=43.61 Aligned_cols=75 Identities=21% Similarity=0.135 Sum_probs=50.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHH--HhcCCC-EE--EeCCCHHHHHHh-------cCCcc
Q 022313 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEAL--SLLGAD-KF--VVSSDLEQMKAL-------GKSLD 246 (299)
Q Consensus 180 ~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~--~~~g~~-~v--~~~~~~~~~~~~-------~~~~d 246 (299)
+++++||.|+ |++|...++.+...|++|++++++++..+... ++.+.. .. .|..+.+.+... .+++|
T Consensus 6 ~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 85 (258)
T PRK08628 6 KDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGRID 85 (258)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCCC
Confidence 5678999998 89999999999989999999998877653221 122322 11 233344433222 25789
Q ss_pred EEEEcCCC
Q 022313 247 FIIDTASG 254 (299)
Q Consensus 247 ~v~d~~g~ 254 (299)
+++.+.|.
T Consensus 86 ~vi~~ag~ 93 (258)
T PRK08628 86 GLVNNAGV 93 (258)
T ss_pred EEEECCcc
Confidence 99999983
No 472
>PRK09135 pteridine reductase; Provisional
Probab=95.32 E-value=0.15 Score=43.29 Aligned_cols=75 Identities=17% Similarity=0.150 Sum_probs=49.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCch-HHHHHHHhc----CC-CEE--EeCCCHHHHHHh-------cC
Q 022313 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTS-KKEEALSLL----GA-DKF--VVSSDLEQMKAL-------GK 243 (299)
Q Consensus 180 ~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~-~~~~~~~~~----g~-~~v--~~~~~~~~~~~~-------~~ 243 (299)
.++++||.|+ |.+|..+++.+...|++|++++++.. ..+.+.+.+ +. ..+ .|..+.+.+..+ .+
T Consensus 5 ~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 84 (249)
T PRK09135 5 SAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAFG 84 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 4578999998 99999999999889999999998643 333332221 11 112 244444443332 25
Q ss_pred CccEEEEcCCC
Q 022313 244 SLDFIIDTASG 254 (299)
Q Consensus 244 ~~d~v~d~~g~ 254 (299)
++|++|.+.|.
T Consensus 85 ~~d~vi~~ag~ 95 (249)
T PRK09135 85 RLDALVNNASS 95 (249)
T ss_pred CCCEEEECCCC
Confidence 78999999883
No 473
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=95.32 E-value=0.12 Score=44.49 Aligned_cols=74 Identities=24% Similarity=0.265 Sum_probs=48.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeC-CchHHHHHHHh----cCCC-EE--EeCCCHHHHHHh-------cC
Q 022313 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLST-STSKKEEALSL----LGAD-KF--VVSSDLEQMKAL-------GK 243 (299)
Q Consensus 180 ~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~-~~~~~~~~~~~----~g~~-~v--~~~~~~~~~~~~-------~~ 243 (299)
+++++||.|+ +++|...+..+...|++|+++.+ ++++.+.+.++ .+.. .. .|..+.+.+.++ -+
T Consensus 7 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 86 (260)
T PRK08416 7 KGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDEDFD 86 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence 5789999998 89999999999999999988765 44444333222 2322 12 244444443322 25
Q ss_pred CccEEEEcCC
Q 022313 244 SLDFIIDTAS 253 (299)
Q Consensus 244 ~~d~v~d~~g 253 (299)
.+|+++.+.|
T Consensus 87 ~id~lv~nAg 96 (260)
T PRK08416 87 RVDFFISNAI 96 (260)
T ss_pred CccEEEECcc
Confidence 7899999885
No 474
>PLN02730 enoyl-[acyl-carrier-protein] reductase
Probab=95.31 E-value=0.22 Score=44.24 Aligned_cols=41 Identities=24% Similarity=0.196 Sum_probs=32.9
Q ss_pred CCCCEEEEEcC---ChHHHHHHHHHHHCCCeEEEEeCCchHHHHH
Q 022313 179 QPGKSLGVIGL---GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEA 220 (299)
Q Consensus 179 ~~g~~vlI~G~---g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~ 220 (299)
-.|+++||.|+ .++|.+.++.+...|++|++ .+..+++++.
T Consensus 7 l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~ 50 (303)
T PLN02730 7 LRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIF 50 (303)
T ss_pred CCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHH
Confidence 35889999988 78999999999999999988 5555544433
No 475
>PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.31 E-value=0.18 Score=44.07 Aligned_cols=96 Identities=21% Similarity=0.224 Sum_probs=71.8
Q ss_pred cccchhhHHHHHHhhhccCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEEeCCCHHH
Q 022313 159 APLLCAGITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQ 237 (299)
Q Consensus 159 a~~~~~~~ta~~al~~~~~~~~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~ 237 (299)
..+||...+.+..++....--.|++++|+|. ..+|.=.+.++...++.|++.-+....+
T Consensus 135 ~~~PcTp~avi~lL~~y~i~l~Gk~vvVvGrS~iVGkPla~lL~~~~atVt~chs~T~nl-------------------- 194 (282)
T PRK14166 135 GFLPCTPLGVMKLLKAYEIDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKTKDL-------------------- 194 (282)
T ss_pred CCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCH--------------------
Confidence 3467777777777766554368999999997 6899999999998899998766543222
Q ss_pred HHHhcCCccEEEEcCCCchhHHHHHHhcccCcEEEEEcCC
Q 022313 238 MKALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP 277 (299)
Q Consensus 238 ~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~ 277 (299)
++..+..|+++-++|.+..+. -++++++..++++|..
T Consensus 195 -~~~~~~ADIvIsAvGkp~~i~--~~~vk~GavVIDvGin 231 (282)
T PRK14166 195 -SLYTRQADLIIVAAGCVNLLR--SDMVKEGVIVVDVGIN 231 (282)
T ss_pred -HHHHhhCCEEEEcCCCcCccC--HHHcCCCCEEEEeccc
Confidence 223366899999999887333 4689999999999955
No 476
>PRK10258 biotin biosynthesis protein BioC; Provisional
Probab=95.28 E-value=0.18 Score=43.27 Aligned_cols=94 Identities=17% Similarity=0.190 Sum_probs=62.1
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEEeCCCHHHHHHhcCCccEEEEcCCC----
Q 022313 179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASG---- 254 (299)
Q Consensus 179 ~~g~~vlI~G~g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~v~d~~g~---- 254 (299)
.++.+||-+|+|. |..+..+++ .+.+++.++.+++.++.+.+......++..+- +.+.-..+.||+|+....-
T Consensus 41 ~~~~~vLDiGcG~-G~~~~~l~~-~~~~v~~~D~s~~~l~~a~~~~~~~~~~~~d~-~~~~~~~~~fD~V~s~~~l~~~~ 117 (251)
T PRK10258 41 RKFTHVLDAGCGP-GWMSRYWRE-RGSQVTALDLSPPMLAQARQKDAADHYLAGDI-ESLPLATATFDLAWSNLAVQWCG 117 (251)
T ss_pred cCCCeEEEeeCCC-CHHHHHHHH-cCCeEEEEECCHHHHHHHHhhCCCCCEEEcCc-ccCcCCCCcEEEEEECchhhhcC
Confidence 4678899999875 655555554 57899999999988888854443333332221 1111123569999875431
Q ss_pred --chhHHHHHHhcccCcEEEEEc
Q 022313 255 --DHPFDAYMSLLKVAGVYVLVG 275 (299)
Q Consensus 255 --~~~~~~~~~~l~~~G~~v~~g 275 (299)
...+..+.+.|+++|.++...
T Consensus 118 d~~~~l~~~~~~Lk~gG~l~~~~ 140 (251)
T PRK10258 118 NLSTALRELYRVVRPGGVVAFTT 140 (251)
T ss_pred CHHHHHHHHHHHcCCCeEEEEEe
Confidence 234778889999999998764
No 477
>PRK07856 short chain dehydrogenase; Provisional
Probab=95.28 E-value=0.096 Score=44.79 Aligned_cols=72 Identities=25% Similarity=0.255 Sum_probs=49.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCE-EEeCCCHHHHHHh-------cCCccEEEE
Q 022313 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADK-FVVSSDLEQMKAL-------GKSLDFIID 250 (299)
Q Consensus 180 ~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~~-------~~~~d~v~d 250 (299)
.++++||.|+ |++|...++.+...|++|++++++++. .. ....... ..|..+.+.+.++ .+++|++|.
T Consensus 5 ~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~--~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~ 81 (252)
T PRK07856 5 TGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE--TV-DGRPAEFHAADVRDPDQVAALVDAIVERHGRLDVLVN 81 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh--hh-cCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 5789999988 899999999999999999999987654 11 1111111 1244444443332 257899999
Q ss_pred cCCC
Q 022313 251 TASG 254 (299)
Q Consensus 251 ~~g~ 254 (299)
+.|.
T Consensus 82 ~ag~ 85 (252)
T PRK07856 82 NAGG 85 (252)
T ss_pred CCCC
Confidence 9873
No 478
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.28 E-value=0.54 Score=39.93 Aligned_cols=98 Identities=18% Similarity=0.098 Sum_probs=61.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCc-hHHHHHH---HhcCCC-EE--EeCCCHHHHHHh-------cCC
Q 022313 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTST-SKKEEAL---SLLGAD-KF--VVSSDLEQMKAL-------GKS 244 (299)
Q Consensus 180 ~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~-~~~~~~~---~~~g~~-~v--~~~~~~~~~~~~-------~~~ 244 (299)
.++++||.|+ |.+|...++.+...|+++++..+.. +...... ++.+.. .. .|..+.+.+.++ .++
T Consensus 5 ~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (252)
T PRK06077 5 KDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRYGV 84 (252)
T ss_pred CCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHcCC
Confidence 3678999998 8999999988888999987776542 3222211 233322 12 233344333222 257
Q ss_pred ccEEEEcCCCc-------------------------hhHHHHHHhcccCcEEEEEcCC
Q 022313 245 LDFIIDTASGD-------------------------HPFDAYMSLLKVAGVYVLVGFP 277 (299)
Q Consensus 245 ~d~v~d~~g~~-------------------------~~~~~~~~~l~~~G~~v~~g~~ 277 (299)
+|.+|.+.|.. ...+.+.+.++..|+++.++..
T Consensus 85 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~ 142 (252)
T PRK06077 85 ADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASV 142 (252)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcch
Confidence 89999999831 0133445566678899999876
No 479
>PRK01683 trans-aconitate 2-methyltransferase; Provisional
Probab=95.28 E-value=0.31 Score=42.00 Aligned_cols=94 Identities=23% Similarity=0.219 Sum_probs=64.3
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHC-CCeEEEEeCCchHHHHHHHhcCCCEEEeCCCHHHHHHhcCCccEEEEcCCC--
Q 022313 178 NQPGKSLGVIGLGGLGHMAVKFGKAF-GLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASG-- 254 (299)
Q Consensus 178 ~~~g~~vlI~G~g~~G~~a~~~a~~~-g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~v~d~~g~-- 254 (299)
++++++||=+|+|. |..+..+++.. +.+|+.++.++.-.+.+.+.+....++..+-. .. .....+|+|+-...-
T Consensus 29 ~~~~~~vLDiGcG~-G~~~~~la~~~~~~~v~gvD~s~~~i~~a~~~~~~~~~~~~d~~-~~-~~~~~fD~v~~~~~l~~ 105 (258)
T PRK01683 29 LENPRYVVDLGCGP-GNSTELLVERWPAARITGIDSSPAMLAEARSRLPDCQFVEADIA-SW-QPPQALDLIFANASLQW 105 (258)
T ss_pred CcCCCEEEEEcccC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhCCCCeEEECchh-cc-CCCCCccEEEEccChhh
Confidence 37788888899863 66677778766 46999999999888887655543333333221 11 123579999765441
Q ss_pred ----chhHHHHHHhcccCcEEEEE
Q 022313 255 ----DHPFDAYMSLLKVAGVYVLV 274 (299)
Q Consensus 255 ----~~~~~~~~~~l~~~G~~v~~ 274 (299)
...+..+.+.|+++|+++..
T Consensus 106 ~~d~~~~l~~~~~~LkpgG~~~~~ 129 (258)
T PRK01683 106 LPDHLELFPRLVSLLAPGGVLAVQ 129 (258)
T ss_pred CCCHHHHHHHHHHhcCCCcEEEEE
Confidence 23577888999999998875
No 480
>PRK13581 D-3-phosphoglycerate dehydrogenase; Provisional
Probab=95.25 E-value=0.16 Score=48.69 Aligned_cols=89 Identities=28% Similarity=0.347 Sum_probs=62.5
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEEeCCCHHHHHHhcCCccEEEEcCCCch---
Q 022313 180 PGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDH--- 256 (299)
Q Consensus 180 ~g~~vlI~G~g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~v~d~~g~~~--- 256 (299)
.|++|.|+|.|.+|...++.++.+|.+|+++++.... +.. ..+|...+ .+.++....|+|+.++....
T Consensus 139 ~gktvgIiG~G~IG~~vA~~l~~fG~~V~~~d~~~~~-~~~-~~~g~~~~-------~l~ell~~aDiV~l~lP~t~~t~ 209 (526)
T PRK13581 139 YGKTLGIIGLGRIGSEVAKRAKAFGMKVIAYDPYISP-ERA-AQLGVELV-------SLDELLARADFITLHTPLTPETR 209 (526)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEECCCCCh-hHH-HhcCCEEE-------cHHHHHhhCCEEEEccCCChHhh
Confidence 5789999999999999999999999999999985432 222 34555332 23344456788888777532
Q ss_pred -hH-HHHHHhcccCcEEEEEcCC
Q 022313 257 -PF-DAYMSLLKVAGVYVLVGFP 277 (299)
Q Consensus 257 -~~-~~~~~~l~~~G~~v~~g~~ 277 (299)
.+ ...+..|+++..++.++-.
T Consensus 210 ~li~~~~l~~mk~ga~lIN~aRG 232 (526)
T PRK13581 210 GLIGAEELAKMKPGVRIINCARG 232 (526)
T ss_pred cCcCHHHHhcCCCCeEEEECCCC
Confidence 12 4567788888877777543
No 481
>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=95.25 E-value=0.15 Score=48.20 Aligned_cols=71 Identities=23% Similarity=0.234 Sum_probs=50.4
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCchH-----HHHHHHhcCCCEEEeCCCHHHHHHhcCCccEEEEcCC
Q 022313 179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSK-----KEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTAS 253 (299)
Q Consensus 179 ~~g~~vlI~G~g~~G~~a~~~a~~~g~~v~~~~~~~~~-----~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~v~d~~g 253 (299)
..+++|+|+|+|.+|+.++.+++..|.+|++++..+.. .+.+ ++.|.+........ ....+|+|+.+.|
T Consensus 14 ~~~~~v~viG~G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l-~~~gv~~~~~~~~~-----~~~~~D~Vv~s~G 87 (480)
T PRK01438 14 WQGLRVVVAGLGVSGFAAADALLELGARVTVVDDGDDERHRALAAIL-EALGATVRLGPGPT-----LPEDTDLVVTSPG 87 (480)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHH-HHcCCEEEECCCcc-----ccCCCCEEEECCC
Confidence 35678999999999999999999999999999866531 1223 56676554432211 2356899998888
Q ss_pred Cc
Q 022313 254 GD 255 (299)
Q Consensus 254 ~~ 255 (299)
-+
T Consensus 88 i~ 89 (480)
T PRK01438 88 WR 89 (480)
T ss_pred cC
Confidence 54
No 482
>COG1712 Predicted dinucleotide-utilizing enzyme [General function prediction only]
Probab=95.25 E-value=0.12 Score=43.19 Aligned_cols=81 Identities=19% Similarity=0.312 Sum_probs=53.8
Q ss_pred EEEEEcCChHHHHHHHHHHHC--CC-eEEEEeCCchHHHHHHHhcCCCEEEeCCCHHHHHHhcCCccEEEEcCCCchhHH
Q 022313 183 SLGVIGLGGLGHMAVKFGKAF--GL-NVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHPFD 259 (299)
Q Consensus 183 ~vlI~G~g~~G~~a~~~a~~~--g~-~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~ 259 (299)
+|.|+|+|.+|.....+.+.- .. .+++.+++.++..++.+.++...+ ..++++....|++++|.+.....+
T Consensus 2 ~vgiVGcGaIG~~l~e~v~~~~~~~e~v~v~D~~~ek~~~~~~~~~~~~~------s~ide~~~~~DlvVEaAS~~Av~e 75 (255)
T COG1712 2 KVGIVGCGAIGKFLLELVRDGRVDFELVAVYDRDEEKAKELEASVGRRCV------SDIDELIAEVDLVVEAASPEAVRE 75 (255)
T ss_pred eEEEEeccHHHHHHHHHHhcCCcceeEEEEecCCHHHHHHHHhhcCCCcc------ccHHHHhhccceeeeeCCHHHHHH
Confidence 477899999999999999843 45 688888888888877556664322 123333355666666666655444
Q ss_pred HHHHhcccCc
Q 022313 260 AYMSLLKVAG 269 (299)
Q Consensus 260 ~~~~~l~~~G 269 (299)
-+.+.|+.+-
T Consensus 76 ~~~~~L~~g~ 85 (255)
T COG1712 76 YVPKILKAGI 85 (255)
T ss_pred HhHHHHhcCC
Confidence 4555555543
No 483
>PRK14183 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.24 E-value=0.19 Score=43.82 Aligned_cols=95 Identities=17% Similarity=0.200 Sum_probs=69.5
Q ss_pred ccchhhHHHHHHhhhccCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEEeCCCHHHH
Q 022313 160 PLLCAGITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQM 238 (299)
Q Consensus 160 ~~~~~~~ta~~al~~~~~~~~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 238 (299)
..||...+....++....--.|++++|+|. ..+|.-.+.++...++.|++.-.....+
T Consensus 136 ~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~AtVti~hs~T~~l--------------------- 194 (281)
T PRK14183 136 FVPCTPLGVMELLEEYEIDVKGKDVCVVGASNIVGKPMAALLLNANATVDICHIFTKDL--------------------- 194 (281)
T ss_pred CCCCcHHHHHHHHHHcCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCcCH---------------------
Confidence 467666666666665554468999999998 5899999999998999888654322211
Q ss_pred HHhcCCccEEEEcCCCchhHHHHHHhcccCcEEEEEcCC
Q 022313 239 KALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP 277 (299)
Q Consensus 239 ~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~ 277 (299)
.+..+..|+++-++|.+..+ --++++++..++++|..
T Consensus 195 ~~~~~~ADIvV~AvGkp~~i--~~~~vk~gavvIDvGin 231 (281)
T PRK14183 195 KAHTKKADIVIVGVGKPNLI--TEDMVKEGAIVIDIGIN 231 (281)
T ss_pred HHHHhhCCEEEEecCccccc--CHHHcCCCcEEEEeecc
Confidence 22346689999999987632 35788999999999855
No 484
>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E.coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=95.24 E-value=0.16 Score=43.14 Aligned_cols=33 Identities=27% Similarity=0.503 Sum_probs=28.6
Q ss_pred CCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCC
Q 022313 181 GKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTS 213 (299)
Q Consensus 181 g~~vlI~G~g~~G~~a~~~a~~~g~-~v~~~~~~ 213 (299)
..+|+|+|.|++|..++..+.+.|. ++++++.+
T Consensus 11 ~~~VlVvG~GGvGs~va~~Lar~GVg~i~LvD~D 44 (231)
T cd00755 11 NAHVAVVGLGGVGSWAAEALARSGVGKLTLIDFD 44 (231)
T ss_pred CCCEEEECCCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 3679999999999999999999998 88887755
No 485
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.22 E-value=0.028 Score=52.74 Aligned_cols=92 Identities=16% Similarity=0.150 Sum_probs=57.8
Q ss_pred ccCCCCCCEEE----EEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCC-EEEeCCCHHHHHHhcCCccEE
Q 022313 175 HKMNQPGKSLG----VIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGAD-KFVVSSDLEQMKALGKSLDFI 248 (299)
Q Consensus 175 ~~~~~~g~~vl----I~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~~~~~d~v 248 (299)
..++++++.+| |+|+ |++|.+++|+++..|++|+.+.+.+.+.... +..+.. .+++....+...++..
T Consensus 28 l~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~~~~l~~----- 101 (450)
T PRK08261 28 LRRYRPGQPLLDGPVLVGGAGRLAEALAALLAGLGYDVVANNDGGLTWAAG-WGDRFGALVFDATGITDPADLKA----- 101 (450)
T ss_pred ccCCCCCCCCCCCceEEccCchhHHHHHHHHhhCCCeeeecCccccccccC-cCCcccEEEEECCCCCCHHHHHH-----
Confidence 34457888887 7765 9999999999999999999987665432222 122333 2333332111111100
Q ss_pred EEcCCCchhHHHHHHhcccCcEEEEEcCC
Q 022313 249 IDTASGDHPFDAYMSLLKVAGVYVLVGFP 277 (299)
Q Consensus 249 ~d~~g~~~~~~~~~~~l~~~G~~v~~g~~ 277 (299)
-...+...++.|.++|+++.++..
T Consensus 102 -----~~~~~~~~l~~l~~~griv~i~s~ 125 (450)
T PRK08261 102 -----LYEFFHPVLRSLAPCGRVVVLGRP 125 (450)
T ss_pred -----HHHHHHHHHHhccCCCEEEEEccc
Confidence 012366778889999999999877
No 486
>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).
Probab=95.20 E-value=0.15 Score=43.30 Aligned_cols=89 Identities=19% Similarity=0.232 Sum_probs=53.0
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCchHH-------------------HHHH---HhcCCC-EEEeCC--
Q 022313 180 PGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKK-------------------EEAL---SLLGAD-KFVVSS-- 233 (299)
Q Consensus 180 ~g~~vlI~G~g~~G~~a~~~a~~~g~-~v~~~~~~~~~~-------------------~~~~---~~~g~~-~v~~~~-- 233 (299)
...+|+|+|+|++|...+..+.+.|. ++++++.+.-+. +.++ +++..+ .+....
T Consensus 20 ~~~~VlivG~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~~~~ 99 (228)
T cd00757 20 KNARVLVVGAGGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEAYNER 99 (228)
T ss_pred hCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEEecce
Confidence 35789999999999999999999998 777775442111 1111 222221 121111
Q ss_pred -CHHHHHHhcCCccEEEEcCCCchhHHHHHHhcccC
Q 022313 234 -DLEQMKALGKSLDFIIDTASGDHPFDAYMSLLKVA 268 (299)
Q Consensus 234 -~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~ 268 (299)
+.+...++-.++|+|++|...........+.....
T Consensus 100 i~~~~~~~~~~~~DvVi~~~d~~~~r~~l~~~~~~~ 135 (228)
T cd00757 100 LDAENAEELIAGYDLVLDCTDNFATRYLINDACVKL 135 (228)
T ss_pred eCHHHHHHHHhCCCEEEEcCCCHHHHHHHHHHHHHc
Confidence 12334444578999999999876433333333333
No 487
>PRK14184 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.20 E-value=0.17 Score=44.22 Aligned_cols=95 Identities=23% Similarity=0.207 Sum_probs=70.2
Q ss_pred ccchhhHHHHHHhhhccCCCCCCEEEEEcC-ChHHHHHHHHHHH----CCCeEEEEeCCchHHHHHHHhcCCCEEEeCCC
Q 022313 160 PLLCAGITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKA----FGLNVTVLSTSTSKKEEALSLLGADKFVVSSD 234 (299)
Q Consensus 160 ~~~~~~~ta~~al~~~~~~~~g~~vlI~G~-g~~G~~a~~~a~~----~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~ 234 (299)
.+||...+....++....--.|+++.|+|. ..+|.=...++.. .+++|++.......+++
T Consensus 136 ~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~~~~~AtVt~~hs~t~~l~~--------------- 200 (286)
T PRK14184 136 FRPCTPAGVMTLLERYGLSPAGKKAVVVGRSNIVGKPLALMLGAPGKFANATVTVCHSRTPDLAE--------------- 200 (286)
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHhCCcccCCCEEEEEeCCchhHHH---------------
Confidence 457777777777766654468999999997 6899999998887 78888887755433332
Q ss_pred HHHHHHhcCCccEEEEcCCCchhHHHHHHhcccCcEEEEEcCC
Q 022313 235 LEQMKALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP 277 (299)
Q Consensus 235 ~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~ 277 (299)
..+..|+|+-++|.+..+. -+.++++..++++|..
T Consensus 201 ------~~~~ADIVI~AvG~p~li~--~~~vk~GavVIDVGi~ 235 (286)
T PRK14184 201 ------ECREADFLFVAIGRPRFVT--ADMVKPGAVVVDVGIN 235 (286)
T ss_pred ------HHHhCCEEEEecCCCCcCC--HHHcCCCCEEEEeeee
Confidence 2356889999998876433 3677999999999865
No 488
>TIGR00477 tehB tellurite resistance protein TehB. Part of a tellurite-reducing operon tehA and tehB
Probab=95.20 E-value=0.22 Score=41.15 Aligned_cols=93 Identities=16% Similarity=0.189 Sum_probs=56.4
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHh---cCCCEEEeCCCHHHHHHhcCCccEEEEcCC--
Q 022313 179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL---LGADKFVVSSDLEQMKALGKSLDFIIDTAS-- 253 (299)
Q Consensus 179 ~~g~~vlI~G~g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~---~g~~~v~~~~~~~~~~~~~~~~d~v~d~~g-- 253 (299)
.++.+||-+|+|. |..+..+++ .|.+|++++.+++-.+.+.+. .+........+.... ...+.+|+|+...-
T Consensus 29 ~~~~~vLDiGcG~-G~~a~~la~-~g~~V~~iD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~-~~~~~fD~I~~~~~~~ 105 (195)
T TIGR00477 29 VAPCKTLDLGCGQ-GRNSLYLSL-AGYDVRAWDHNPASIASVLDMKARENLPLRTDAYDINAA-ALNEDYDFIFSTVVFM 105 (195)
T ss_pred CCCCcEEEeCCCC-CHHHHHHHH-CCCeEEEEECCHHHHHHHHHHHHHhCCCceeEeccchhc-cccCCCCEEEEecccc
Confidence 4556888888863 666666666 478999999998766655322 232211111111111 12357999976422
Q ss_pred ---C---chhHHHHHHhcccCcEEEEE
Q 022313 254 ---G---DHPFDAYMSLLKVAGVYVLV 274 (299)
Q Consensus 254 ---~---~~~~~~~~~~l~~~G~~v~~ 274 (299)
. ...++.+.+.|+++|.++.+
T Consensus 106 ~~~~~~~~~~l~~~~~~LkpgG~lli~ 132 (195)
T TIGR00477 106 FLQAGRVPEIIANMQAHTRPGGYNLIV 132 (195)
T ss_pred cCCHHHHHHHHHHHHHHhCCCcEEEEE
Confidence 1 23577788899999996555
No 489
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=95.19 E-value=0.14 Score=43.75 Aligned_cols=73 Identities=21% Similarity=0.160 Sum_probs=50.5
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHh---cCCC-EE--EeCCCHHHHHHh-------cCCccE
Q 022313 182 KSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL---LGAD-KF--VVSSDLEQMKAL-------GKSLDF 247 (299)
Q Consensus 182 ~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~---~g~~-~v--~~~~~~~~~~~~-------~~~~d~ 247 (299)
++++|.|+ |.+|...++.+...|++|+++.+++++.+.+.++ .+.. .. .|..+.+.+.++ .++.|+
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~ 80 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDV 80 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 46899987 9999999999999999999999987665544333 2321 11 244444443332 257899
Q ss_pred EEEcCCC
Q 022313 248 IIDTASG 254 (299)
Q Consensus 248 v~d~~g~ 254 (299)
++.+.|.
T Consensus 81 vi~~ag~ 87 (254)
T TIGR02415 81 MVNNAGV 87 (254)
T ss_pred EEECCCc
Confidence 9998874
No 490
>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating). This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.
Probab=95.19 E-value=0.28 Score=43.40 Aligned_cols=88 Identities=16% Similarity=0.149 Sum_probs=55.3
Q ss_pred EEEEEcCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEEeCCCHHHHHHhcCCccEEEEcCCCchhHHH--
Q 022313 183 SLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHPFDA-- 260 (299)
Q Consensus 183 ~vlI~G~g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~-- 260 (299)
+|.|+|.|.+|...+.-+...|.+|++.++++++.+.+. +.+.... .+.+.+.+.....|+|+-++.... .+.
T Consensus 2 ~Ig~IGlG~mG~~la~~L~~~g~~V~~~dr~~~~~~~l~-~~g~~~~---~s~~~~~~~~~~~dvIi~~vp~~~-~~~v~ 76 (298)
T TIGR00872 2 QLGLIGLGRMGANIVRRLAKRGHDCVGYDHDQDAVKAMK-EDRTTGV---ANLRELSQRLSAPRVVWVMVPHGI-VDAVL 76 (298)
T ss_pred EEEEEcchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-HcCCccc---CCHHHHHhhcCCCCEEEEEcCchH-HHHHH
Confidence 578899999999888888888999999999999888874 4453221 122222222244677777666542 333
Q ss_pred --HHHhcccCcEEEEEc
Q 022313 261 --YMSLLKVAGVYVLVG 275 (299)
Q Consensus 261 --~~~~l~~~G~~v~~g 275 (299)
....++++-.+++.+
T Consensus 77 ~~l~~~l~~g~ivid~s 93 (298)
T TIGR00872 77 EELAPTLEKGDIVIDGG 93 (298)
T ss_pred HHHHhhCCCCCEEEECC
Confidence 233344444454443
No 491
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=95.18 E-value=0.49 Score=40.23 Aligned_cols=69 Identities=19% Similarity=0.149 Sum_probs=47.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCC-CEE--EeCCCHHHHHHh-------cCCccEE
Q 022313 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGA-DKF--VVSSDLEQMKAL-------GKSLDFI 248 (299)
Q Consensus 180 ~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~-~~v--~~~~~~~~~~~~-------~~~~d~v 248 (299)
+++++||.|+ |.+|...+..+...|++|++++++. . +..+. ... .|..+.+.+.++ .+++|++
T Consensus 7 ~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~-----~-~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 80 (252)
T PRK08220 7 SGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF-----L-TQEDYPFATFVLDVSDAAAVAQVCQRLLAETGPLDVL 80 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch-----h-hhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 5688999998 8999999999988999999999875 1 22231 111 233444433332 2568999
Q ss_pred EEcCCC
Q 022313 249 IDTASG 254 (299)
Q Consensus 249 ~d~~g~ 254 (299)
+.+.|.
T Consensus 81 i~~ag~ 86 (252)
T PRK08220 81 VNAAGI 86 (252)
T ss_pred EECCCc
Confidence 999885
No 492
>PRK14187 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.18 E-value=0.2 Score=44.04 Aligned_cols=95 Identities=16% Similarity=0.121 Sum_probs=70.8
Q ss_pred ccchhhHHHHHHhhhccCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEEeCCCHHHH
Q 022313 160 PLLCAGITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQM 238 (299)
Q Consensus 160 ~~~~~~~ta~~al~~~~~~~~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 238 (299)
.+||...+....++....--.|++++|+|. ..+|.=...++...+++|++.......++
T Consensus 139 ~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~aTVt~chs~T~~l~-------------------- 198 (294)
T PRK14187 139 LIPCTPKGCLYLIKTITRNLSGSDAVVIGRSNIVGKPMACLLLGENCTVTTVHSATRDLA-------------------- 198 (294)
T ss_pred ccCcCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHhhCCCEEEEeCCCCCCHH--------------------
Confidence 456666666666766554478999999997 68999999999999999988765432222
Q ss_pred HHhcCCccEEEEcCCCchhHHHHHHhcccCcEEEEEcCC
Q 022313 239 KALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP 277 (299)
Q Consensus 239 ~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~ 277 (299)
+..+..|+++-++|.+..+ --++++++..++++|..
T Consensus 199 -~~~~~ADIvVsAvGkp~~i--~~~~ik~gaiVIDVGin 234 (294)
T PRK14187 199 -DYCSKADILVAAVGIPNFV--KYSWIKKGAIVIDVGIN 234 (294)
T ss_pred -HHHhhCCEEEEccCCcCcc--CHHHcCCCCEEEEeccc
Confidence 2336688999999987632 34678899999999865
No 493
>PRK05600 thiamine biosynthesis protein ThiF; Validated
Probab=95.17 E-value=0.13 Score=46.96 Aligned_cols=77 Identities=19% Similarity=0.233 Sum_probs=49.9
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCchHHHHH-------------------H---HhcCC-CEEEeC---
Q 022313 180 PGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEA-------------------L---SLLGA-DKFVVS--- 232 (299)
Q Consensus 180 ~g~~vlI~G~g~~G~~a~~~a~~~g~-~v~~~~~~~~~~~~~-------------------~---~~~g~-~~v~~~--- 232 (299)
...+|+|+|+|++|..++..+.+.|. ++++++.+.-+...+ + +++.. ..+...
T Consensus 40 ~~~~VliiG~GglG~~v~~~La~~Gvg~i~ivD~D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~~~ 119 (370)
T PRK05600 40 HNARVLVIGAGGLGCPAMQSLASAGVGTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEIQPDIRVNALRER 119 (370)
T ss_pred cCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCEEccccccccccCChhHCCCHHHHHHHHHHHHHCCCCeeEEeeee
Confidence 45679999999999999999999998 888887652221111 1 22221 111111
Q ss_pred CCHHHHHHhcCCccEEEEcCCCch
Q 022313 233 SDLEQMKALGKSLDFIIDTASGDH 256 (299)
Q Consensus 233 ~~~~~~~~~~~~~d~v~d~~g~~~ 256 (299)
-+.+.+.++-+++|+|+||+.+..
T Consensus 120 i~~~~~~~~~~~~DlVid~~Dn~~ 143 (370)
T PRK05600 120 LTAENAVELLNGVDLVLDGSDSFA 143 (370)
T ss_pred cCHHHHHHHHhCCCEEEECCCCHH
Confidence 122344445578999999999876
No 494
>PRK05599 hypothetical protein; Provisional
Probab=95.17 E-value=0.13 Score=43.98 Aligned_cols=71 Identities=15% Similarity=0.186 Sum_probs=49.1
Q ss_pred EEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhc---CCC--EEE--eCCCHHHHHH-------hcCCccE
Q 022313 183 SLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL---GAD--KFV--VSSDLEQMKA-------LGKSLDF 247 (299)
Q Consensus 183 ~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~---g~~--~v~--~~~~~~~~~~-------~~~~~d~ 247 (299)
+++|.|+ +++|...++.+. .|++|+++++++++.+.+.+++ |.+ ..+ |-.+.+.+++ ..+++|+
T Consensus 2 ~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~ 80 (246)
T PRK05599 2 SILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEISL 80 (246)
T ss_pred eEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCCE
Confidence 6889988 899999888776 4899999999988877664443 322 222 3444433332 2367999
Q ss_pred EEEcCCC
Q 022313 248 IIDTASG 254 (299)
Q Consensus 248 v~d~~g~ 254 (299)
++.+.|.
T Consensus 81 lv~nag~ 87 (246)
T PRK05599 81 AVVAFGI 87 (246)
T ss_pred EEEecCc
Confidence 9998874
No 495
>PLN02490 MPBQ/MSBQ methyltransferase
Probab=95.16 E-value=0.22 Score=44.90 Aligned_cols=96 Identities=21% Similarity=0.228 Sum_probs=62.4
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCC-CeEEEEeCCchHHHHHHHhcCCC--EEEeCCCHHHHHHhcCCccEEEEcCC--
Q 022313 179 QPGKSLGVIGLGGLGHMAVKFGKAFG-LNVTVLSTSTSKKEEALSLLGAD--KFVVSSDLEQMKALGKSLDFIIDTAS-- 253 (299)
Q Consensus 179 ~~g~~vlI~G~g~~G~~a~~~a~~~g-~~v~~~~~~~~~~~~~~~~~g~~--~v~~~~~~~~~~~~~~~~d~v~d~~g-- 253 (299)
.++.+||=+|+|. |..+..+++..+ .+++.++.+++-.+.+.++.... .++ ..+.+......+.||+|+.+..
T Consensus 112 ~~~~~VLDLGcGt-G~~~l~La~~~~~~~VtgVD~S~~mL~~A~~k~~~~~i~~i-~gD~e~lp~~~~sFDvVIs~~~L~ 189 (340)
T PLN02490 112 DRNLKVVDVGGGT-GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKII-EGDAEDLPFPTDYADRYVSAGSIE 189 (340)
T ss_pred CCCCEEEEEecCC-cHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhhhccCCeEE-eccHHhCCCCCCceeEEEEcChhh
Confidence 5678888899865 666777777664 58999999988777775443311 122 1111111111356999886432
Q ss_pred ---C-chhHHHHHHhcccCcEEEEEcC
Q 022313 254 ---G-DHPFDAYMSLLKVAGVYVLVGF 276 (299)
Q Consensus 254 ---~-~~~~~~~~~~l~~~G~~v~~g~ 276 (299)
. ...++.+.+.|+++|+++.++.
T Consensus 190 ~~~d~~~~L~e~~rvLkPGG~LvIi~~ 216 (340)
T PLN02490 190 YWPDPQRGIKEAYRVLKIGGKACLIGP 216 (340)
T ss_pred hCCCHHHHHHHHHHhcCCCcEEEEEEe
Confidence 1 2357889999999999988764
No 496
>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.16 E-value=0.19 Score=43.94 Aligned_cols=95 Identities=16% Similarity=0.156 Sum_probs=70.5
Q ss_pred ccchhhHHHHHHhhhccCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEEeCCCHHHH
Q 022313 160 PLLCAGITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQM 238 (299)
Q Consensus 160 ~~~~~~~ta~~al~~~~~~~~g~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 238 (299)
.+||...+....++....--.|+++.|+|. ..+|.-...++...+++|++.-.....+
T Consensus 136 ~~PcTp~avi~lL~~~~i~l~Gk~vvVvGrS~iVGkPla~lL~~~~atVtichs~T~~l--------------------- 194 (284)
T PRK14170 136 FVPCTPAGIIELIKSTGTQIEGKRAVVIGRSNIVGKPVAQLLLNENATVTIAHSRTKDL--------------------- 194 (284)
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCH---------------------
Confidence 467776776666665554368999999997 6899999999999999988775433222
Q ss_pred HHhcCCccEEEEcCCCchhHHHHHHhcccCcEEEEEcCC
Q 022313 239 KALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP 277 (299)
Q Consensus 239 ~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~ 277 (299)
++..+..|+++-++|.+..+ --++++++..++++|..
T Consensus 195 ~~~~~~ADIvI~AvG~~~~i--~~~~vk~GavVIDvGin 231 (284)
T PRK14170 195 PQVAKEADILVVATGLAKFV--KKDYIKPGAIVIDVGMD 231 (284)
T ss_pred HHHHhhCCEEEEecCCcCcc--CHHHcCCCCEEEEccCc
Confidence 22335688999999987632 34688999999999866
No 497
>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase. This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.
Probab=95.15 E-value=0.13 Score=45.40 Aligned_cols=67 Identities=19% Similarity=0.224 Sum_probs=49.2
Q ss_pred EEEEEcCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCCEEEeCCCHHHHHHhcCCccEEEEcCCCch
Q 022313 183 SLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDH 256 (299)
Q Consensus 183 ~vlI~G~g~~G~~a~~~a~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~v~d~~g~~~ 256 (299)
+|.|+|.|.+|...+..+...|.+|+++++++++.+.+ .+.|.... .+ ..+.....|+||.++....
T Consensus 1 ~IgvIG~G~mG~~iA~~l~~~G~~V~~~dr~~~~~~~~-~~~g~~~~---~~---~~~~~~~aDivi~~vp~~~ 67 (291)
T TIGR01505 1 KVGFIGLGIMGSPMSINLAKAGYQLHVTTIGPEVADEL-LAAGAVTA---ET---ARQVTEQADVIFTMVPDSP 67 (291)
T ss_pred CEEEEEecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHH-HHCCCccc---CC---HHHHHhcCCEEEEecCCHH
Confidence 37789999999988888888899999999999888877 45564221 11 2233356788888887654
No 498
>PRK15116 sulfur acceptor protein CsdL; Provisional
Probab=95.15 E-value=0.25 Score=42.93 Aligned_cols=34 Identities=24% Similarity=0.495 Sum_probs=29.6
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCC
Q 022313 180 PGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTS 213 (299)
Q Consensus 180 ~g~~vlI~G~g~~G~~a~~~a~~~g~-~v~~~~~~ 213 (299)
.+.+|+|+|+|++|..++..+.+.|. ++++++.+
T Consensus 29 ~~s~VlVvG~GGVGs~vae~Lar~GVg~itLiD~D 63 (268)
T PRK15116 29 ADAHICVVGIGGVGSWAAEALARTGIGAITLIDMD 63 (268)
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 45789999999999999999999996 88888755
No 499
>PRK15409 bifunctional glyoxylate/hydroxypyruvate reductase B; Provisional
Probab=95.15 E-value=0.12 Score=46.28 Aligned_cols=87 Identities=16% Similarity=0.274 Sum_probs=53.4
Q ss_pred CCCEEEEEcCChHHHHHHHHHH-HCCCeEEEEeCCchHHHHHHHhcCCCEEEeCCCHHHHHHhcCCccEEEEcCCCch--
Q 022313 180 PGKSLGVIGLGGLGHMAVKFGK-AFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDH-- 256 (299)
Q Consensus 180 ~g~~vlI~G~g~~G~~a~~~a~-~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~v~d~~g~~~-- 256 (299)
.|+++.|+|.|.+|...++.++ .+|.+|+..++...... . ..++.... .+.++-...|+|..++.-..
T Consensus 144 ~gktvGIiG~G~IG~~va~~l~~~fgm~V~~~~~~~~~~~-~-~~~~~~~~-------~l~ell~~sDvv~lh~plt~~T 214 (323)
T PRK15409 144 HHKTLGIVGMGRIGMALAQRAHFGFNMPILYNARRHHKEA-E-ERFNARYC-------DLDTLLQESDFVCIILPLTDET 214 (323)
T ss_pred CCCEEEEEcccHHHHHHHHHHHhcCCCEEEEECCCCchhh-H-HhcCcEec-------CHHHHHHhCCEEEEeCCCChHH
Confidence 6799999999999999999998 89999998887632221 1 23343211 12233345566666555322
Q ss_pred ---hHHHHHHhcccCcEEEEEc
Q 022313 257 ---PFDAYMSLLKVAGVYVLVG 275 (299)
Q Consensus 257 ---~~~~~~~~l~~~G~~v~~g 275 (299)
.-...+..|+++..+|.++
T Consensus 215 ~~li~~~~l~~mk~ga~lIN~a 236 (323)
T PRK15409 215 HHLFGAEQFAKMKSSAIFINAG 236 (323)
T ss_pred hhccCHHHHhcCCCCeEEEECC
Confidence 1233556666666665554
No 500
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=95.15 E-value=0.15 Score=43.01 Aligned_cols=73 Identities=23% Similarity=0.204 Sum_probs=47.3
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeC-CchHHHHHHHhc---CCC-EE--EeCCCHHHHHH-------hcCCcc
Q 022313 182 KSLGVIGL-GGLGHMAVKFGKAFGLNVTVLST-STSKKEEALSLL---GAD-KF--VVSSDLEQMKA-------LGKSLD 246 (299)
Q Consensus 182 ~~vlI~G~-g~~G~~a~~~a~~~g~~v~~~~~-~~~~~~~~~~~~---g~~-~v--~~~~~~~~~~~-------~~~~~d 246 (299)
+++||.|+ |++|...++.+...|++++++.+ ++++.+...++. +.. .+ .|..+.+.+.+ ..+++|
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPID 80 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCc
Confidence 46899987 99999999999999999998887 444443332222 211 11 23334333322 136789
Q ss_pred EEEEcCCC
Q 022313 247 FIIDTASG 254 (299)
Q Consensus 247 ~v~d~~g~ 254 (299)
.+|.+.|.
T Consensus 81 ~vi~~ag~ 88 (242)
T TIGR01829 81 VLVNNAGI 88 (242)
T ss_pred EEEECCCC
Confidence 99999874
Done!