Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>022315
MSEASKSLLASTDHGQLGPIGPDYFGFYTCEIMELLSQDEDPLPSTSRTSELTRKKCSGV
RGKDTIDTSGRGTVSSFSNSIGAGFTDFKKERLRSLLRQGVFDLAPEVDEMLDPVIAMCQ
LQSQVRNRKCSPNVNEVACKGDAEQVPRKKLKTSIYSSHSSLKHGSCREGSVSNGIDSKS
LDAALSEKEMSNFKKNCAHCHCQNTSQLTSPNGPKSLCDGCISSYGKDKDLHSDSNIGAD
KENGEVDDDLQFLLESDSSEVEETVKKYSDELFATLGHMEQKLEELLNTVVSRCRSFGN

High Scoring Gene Products

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  022315
        (299 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2086671 - symbol:AT3G27420 "AT3G27420" species...   130  1.1e-12   2


>TAIR|locus:2086671 [details] [associations]
            symbol:AT3G27420 "AT3G27420" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002686 EMBL:AY072433 EMBL:BT002171
            IPI:IPI00522999 RefSeq:NP_566817.1 UniGene:At.37062
            ProteinModelPortal:Q8VY55 SMR:Q8VY55 IntAct:Q8VY55 PRIDE:Q8VY55
            EnsemblPlants:AT3G27420.1 GeneID:822363 KEGG:ath:AT3G27420
            TAIR:At3g27420 InParanoid:Q8VY55 OMA:ANERHSE PhylomeDB:Q8VY55
            ProtClustDB:CLSN2686184 ArrayExpress:Q8VY55 Genevestigator:Q8VY55
            Uniprot:Q8VY55
        Length = 244

 Score = 130 (50.8 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
 Identities = 29/74 (39%), Positives = 43/74 (58%)

Query:   222 ISSYGKDKDLHSDSNIGADKENGEVDDDLQFLLESDSSEVEETVKKYSDELFATLGHMEQ 281
             IS  G      S S+   ++  G  +DD+Q LL SDS  V+    +YS+ L + L +M+Q
Sbjct:    96 ISQLGNKCQSSSPSDFVPEETGGAREDDIQLLLRSDSDMVKNITSQYSNVLLSKLDNMQQ 155

Query:   282 KLEELLNTVVSRCR 295
             +LE LL+ VV+ CR
Sbjct:   156 ELERLLDDVVATCR 169

 Score = 96 (38.9 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
 Identities = 25/50 (50%), Positives = 35/50 (70%)

Query:    81 IGAGFTDFKKERLRSLLRQGVFDLAPEVDEMLDPVIAMCQLQSQVRNRKC 130
             IGAG ++ +K+ L  LLRQ V +L+PEVDEM + V ++  L SQ+ N KC
Sbjct:    56 IGAGMSNVEKDNLNVLLRQCVRNLSPEVDEMQECVRSL-YLISQLGN-KC 103

 Score = 45 (20.9 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
 Identities = 25/80 (31%), Positives = 35/80 (43%)

Query:    23 DYFGFYTCEIMELLSQDE-----DPLPSTSRTSE-LTRKKCSGVRGKDTIDTSGRGTVSS 76
             D FG Y  ++ ELLS  E     D   +  R SE +     S V  KD ++   R  V +
Sbjct:    20 DTFGSYRSQVAELLSLGERISHHDQQEANERHSESVIGAGMSNVE-KDNLNVLLRQCVRN 78

Query:    77 FSNSIGAGFTDFKKERLRSL 96
              S  +     D  +E +RSL
Sbjct:    79 LSPEV-----DEMQECVRSL 93


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.311   0.129   0.367    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      299       299   0.00095  115 3  11 23  0.47    34
                                                     33  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  583 (62 KB)
  Total size of DFA:  197 KB (2112 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  29.73u 0.46s 30.19t   Elapsed:  00:00:02
  Total cpu time:  29.73u 0.46s 30.19t   Elapsed:  00:00:02
  Start:  Tue May 21 02:07:44 2013   End:  Tue May 21 02:07:46 2013

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