Query 022320
Match_columns 299
No_of_seqs 201 out of 1552
Neff 9.2
Searched_HMMs 29240
Date Mon Mar 25 03:34:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022320.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022320hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2p8e_A PPM1B beta isoform vari 100.0 1.8E-49 6.2E-54 352.9 24.5 260 32-298 8-298 (307)
2 2iq1_A Protein phosphatase 2C 100.0 5.2E-48 1.8E-52 338.3 26.6 249 45-298 5-262 (274)
3 2i0o_A Ser/Thr phosphatase; be 100.0 3E-48 1E-52 344.7 23.5 258 33-298 8-304 (304)
4 3qn1_B Protein phosphatase 2C 100.0 6.4E-48 2.2E-52 346.9 24.0 247 49-299 15-329 (337)
5 1a6q_A Phosphatase 2C; catalyt 100.0 8.9E-48 3E-52 350.5 23.1 247 45-298 19-292 (382)
6 4da1_A Protein phosphatase 1K, 100.0 7.8E-47 2.7E-51 345.8 25.0 247 47-298 121-376 (389)
7 3kdj_B Protein phosphatase 2C 100.0 3.4E-47 1.1E-51 339.6 21.5 245 48-299 9-306 (316)
8 2isn_A NYSGXRC-8828Z, phosphat 100.0 6.9E-46 2.4E-50 336.2 25.9 243 47-298 12-333 (364)
9 2i44_A Serine-threonine phosph 100.0 1.3E-45 4.4E-50 330.6 23.7 249 47-299 21-322 (324)
10 3d8k_A PP2C, protein phosphata 100.0 2.9E-45 9.9E-50 333.2 17.9 241 47-298 12-324 (377)
11 2pk0_A Serine/threonine protei 100.0 5.4E-44 1.8E-48 308.7 23.7 237 46-298 4-246 (250)
12 2j4o_A Mitogen-activated prote 100.0 4.6E-45 1.6E-49 335.0 17.4 247 46-298 25-366 (401)
13 2irm_A Mitogen-activated prote 100.0 5.8E-45 2E-49 330.2 17.0 236 53-298 25-356 (358)
14 1txo_A Putative bacterial enzy 100.0 6.3E-43 2.1E-47 299.7 22.9 230 47-299 4-237 (237)
15 2j82_A TPPHA, protein serine-t 100.0 1.5E-42 5.3E-47 297.7 22.7 231 48-297 1-240 (240)
16 2pnq_A [pyruvate dehydrogenase 100.0 3.5E-43 1.2E-47 327.2 18.3 248 48-298 37-455 (467)
17 2jfr_A Ser-Thr phosphatase MSP 100.0 5.3E-42 1.8E-46 293.4 22.4 225 47-298 5-234 (234)
18 3rnr_A Stage II sporulation E 100.0 2.1E-38 7.2E-43 266.9 15.3 196 77-297 8-211 (211)
19 3t91_A Stage II sporulation pr 99.9 5.3E-23 1.8E-27 176.3 16.1 201 45-298 5-220 (242)
20 3pu9_A Protein serine/threonin 99.9 1.5E-21 5.2E-26 167.2 23.3 202 47-298 10-224 (242)
21 3zt9_A Serine phosphatase; hyd 99.8 7.6E-19 2.6E-23 145.2 22.3 189 47-296 3-193 (193)
22 3f79_A Probable two-component 99.8 2.1E-18 7.3E-23 148.7 19.3 202 47-298 37-253 (255)
23 3ke6_A Protein RV1364C/MT1410; 99.4 2.5E-10 8.7E-15 104.3 25.6 200 46-298 34-257 (399)
24 3eq2_A Probable two-component 98.9 2.7E-08 9.2E-13 90.6 15.0 196 47-298 176-392 (394)
25 3c4z_A Rhodopsin kinase; Ser/T 58.9 0.12 4.2E-06 48.6 -8.3 73 211-293 43-126 (543)
26 1dgn_A Iceberg (protease inhib 26.7 97 0.0033 20.9 4.5 32 254-285 33-64 (89)
27 3ugs_B Undecaprenyl pyrophosph 21.4 3.3E+02 0.011 22.0 7.6 29 79-107 8-48 (225)
28 4e9m_A Nucleotide-binding olig 20.6 1.1E+02 0.0039 22.8 4.0 31 254-285 55-85 (144)
29 2nz7_A NOD1, caspase recruitme 20.5 1.2E+02 0.0043 20.9 4.1 31 254-285 41-71 (98)
No 1
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens}
Probab=100.00 E-value=1.8e-49 Score=352.88 Aligned_cols=260 Identities=31% Similarity=0.503 Sum_probs=217.3
Q ss_pred CCCCCCCCcccCCCCceeEEEEeeccCCCCCCCceEEEEeeccC-CceeEEEEEEcCCCCChHHHHHHHHHHHHHHhccC
Q 022320 32 SSSDTGKGRSKSSSNKVSHGYHLVEGQSGHDMEDYLVAEYRKKK-NHVLGLFAIFDGHLGDRVPTYLKDNLFNNILEESN 110 (299)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~s~~G~r~~~neD~~~~~~~~~~-~~~~~l~~V~DG~GG~~~a~~~~~~~~~~~~~~~~ 110 (299)
+.|.+.+.........|.||+++++|+|. .|||++++...... .....+|+|||||||+.+|+++++.++..+.+...
T Consensus 8 ~~p~~~~~~~~~~~~~~~~~~~s~~G~R~-~nED~~~~~~~~~~~~~~~~l~~V~DGhGG~~~a~~as~~~~~~l~~~~~ 86 (307)
T 2p8e_A 8 DKPKTEKHNAHGAGNGLRYGLSSMQGWRV-EMEDAHTAVVGIPHGLEDWSFFAVYDGHAGSRVANYCSTHLLEHITTNED 86 (307)
T ss_dssp SSCEEEEEEEEEEETTEEEEEEEEEETSS-SCCEEEEEEEEETTTEEEEEEEEEEEEESCSHHHHHHHHHHHHHHHTSTT
T ss_pred CCCccccccccCCCCCeeEEEEecCCCCC-cccceEEEEecCCCCCCCeEEEEEECCCCCHHHHHHHHHHHHHHHHhhHh
Confidence 33444444333335679999999999987 89999987543221 23568999999999999999999999998876432
Q ss_pred CC-------------ccHHHHHHHHHHHHHHHHHhhcccc--CCCCcceEEEEEEeCCeEEEEEccCceeEEEecCcccc
Q 022320 111 FW-------------KDPKAAITNAYRSTDQFILENSMQL--GPGGSTAVTAIVIDGKDLWVANVGDSRAVVCERGSANQ 175 (299)
Q Consensus 111 ~~-------------~~~~~~l~~~~~~~~~~l~~~~~~~--~~~~~tt~~~~~i~~~~l~~a~vGDsr~~l~r~~~~~~ 175 (299)
+. ..+...|+++|.++++.|.+..... ...+|||++++++.++++|++||||||+|++|+|++.+
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~i~~~~~~~~~~~~~GtT~~~~~i~~~~l~vanvGDSRa~l~r~g~~~~ 166 (307)
T 2p8e_A 87 FRAAGKSGSALELSVENVKNGIRTGFLKIDEYMRNFSDLRNGMDRSGSTAVGVMISPKHIYFINCGDSRAVLYRNGQVCF 166 (307)
T ss_dssp TC-----------CHHHHHHHHHHHHHHHHHHHHTSTTTC---CCCEECEEEEEECSSEEEEEEESSCEEEEEETTEEEE
T ss_pred hhhcccccccccccHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCCeEEEEEEECCcEEEEEccCcEEEEEECCcccc
Confidence 22 2357889999999999998765322 35688999999999999999999999999999999999
Q ss_pred cccCCCChh--HHHHHHHcCCeeecCCCCcCccCCcccccccccCcCccC---------ccccCCceEEEEeCCCCeEEE
Q 022320 176 ITVDHEPHA--ERRRIEKQGGFVTSLPGDVPRVNGQLAVARAFGDQSLKA---------HLSSEPDVRHVPIDPSIEFLI 244 (299)
Q Consensus 176 lt~dh~~~~--e~~rl~~~gg~~~~~~~~~~~~~~~~~ltr~lG~~~~~~---------~v~~~p~~~~~~l~~g~d~ll 244 (299)
||+||++.+ |+.||...|+.+.. .+.++.+.+||+||+..+|. .+.+.|++..+++.++|++||
T Consensus 167 lT~DH~~~~~~E~~rI~~~gg~v~~-----~rv~g~l~ltRalGd~~~k~~~~~~~~~~~v~~~pdv~~~~l~~~d~~ll 241 (307)
T 2p8e_A 167 STQDHKPCNPREKERIQNAGGSVMI-----QRVNGSLAVSRALGDYDYKCVDGKGPTEQLVSPEPEVYEILRAEEDEFII 241 (307)
T ss_dssp ECCCCCTTSHHHHHHHHHTTCCEET-----TEETTTBSCSBCEECGGGSCCTTCCGGGSSSBCCCEEEEEECCTTEEEEE
T ss_pred CCCCCCCCCHHHHHHHHHcCCEEEe-----CcccCeEeccccccCHHHhcCcccCCCCCeEeccCeEEEEEcCCCCeEEE
Confidence 999999997 88899999998763 36778889999999988763 367899999999999856899
Q ss_pred EecCCCCCCCCCHHHHHHhhcC----CCCHHHHHHHHHHHHHhCCCCCCcEEEEEEeC
Q 022320 245 LASDGLWKQVMKNQEAVDLVKP----IKDPQAAAKRLTTEALARKSKDDISCIVIRFG 298 (299)
Q Consensus 245 L~SDGv~d~~l~~~~i~~i~~~----~~~~~~~a~~L~~~a~~~~~~DNiTvivv~~~ 298 (299)
|||||||| +++++++.+++.. ..+++++|+.|++.|+.+++.||||||||++.
T Consensus 242 L~SDGl~d-~ls~~ei~~~v~~~~~~~~~~~~~a~~Lv~~A~~~g~~DNiTvivv~~~ 298 (307)
T 2p8e_A 242 LACDGIWD-VMSNEELCEYVKSRLEVSDDLENVCNWVVDTCLHKGSRDNMSIVLVCFS 298 (307)
T ss_dssp EECHHHHT-TSCHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHTTCCSCEEEEEEEC-
T ss_pred EECCCccc-CCCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCCCeEEEEEECC
Confidence 99999999 9999999999976 57899999999999999999999999999985
No 2
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens}
Probab=100.00 E-value=5.2e-48 Score=338.29 Aligned_cols=249 Identities=29% Similarity=0.461 Sum_probs=211.5
Q ss_pred CCceeEEEEeeccCCCCCCCceEEEEeeccCCceeEEEEEEcCCCCChHHHHHHHHHHHHHHhccCCCccHHHHHHHHHH
Q 022320 45 SNKVSHGYHLVEGQSGHDMEDYLVAEYRKKKNHVLGLFAIFDGHLGDRVPTYLKDNLFNNILEESNFWKDPKAAITNAYR 124 (299)
Q Consensus 45 ~~~~~~~~~s~~G~r~~~neD~~~~~~~~~~~~~~~l~~V~DG~GG~~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 124 (299)
.+.+.+|+.+++|+|. .|||++++... .++..+|+|||||||+.+|+++++.+...+.+......++...|+++|.
T Consensus 5 ~~~~~~g~~s~~G~R~-~nED~~~~~~~---~~~~~l~~V~DG~GG~~~a~~as~~~~~~l~~~~~~~~~~~~~l~~a~~ 80 (274)
T 2iq1_A 5 ISLENVGCASQIGKRK-ENEDRFDFAQL---TDEVLYFAVYDGHGGPAAADFCHTHMEKCIMDLLPKEKNLETLLTLAFL 80 (274)
T ss_dssp CCGGGCEEEEECCSSS-SCCEEEEEEEC---SSSEEEEEEEEEESSTHHHHHHHHHHHHHHHHHTTTCCCHHHHHHHHHH
T ss_pred ccCCeEEEEecccCCC-CccceEEEeeC---CCCeEEEEEECCCCCHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHH
Confidence 3447899999999977 89999986421 2456899999999999999999998887776654444578899999999
Q ss_pred HHHHHHHhhccc----cCCCCcceEEEEEEeC-CeEEEEEccCceeEEEecCcccccccCCCChh--HHHHHHHcCCeee
Q 022320 125 STDQFILENSMQ----LGPGGSTAVTAIVIDG-KDLWVANVGDSRAVVCERGSANQITVDHEPHA--ERRRIEKQGGFVT 197 (299)
Q Consensus 125 ~~~~~l~~~~~~----~~~~~~tt~~~~~i~~-~~l~~a~vGDsr~~l~r~~~~~~lt~dh~~~~--e~~rl~~~gg~~~ 197 (299)
++++.+.+.... ....+|||++++++.+ .++|++|+||||+|++|++++.+||.||++.+ |++|+.+.||.+.
T Consensus 81 ~~~~~i~~~~~~~~~~~~~~~GtT~~~~~i~~~~~l~~anvGDSR~~l~r~g~~~~lT~DH~~~~~~E~~Ri~~~gG~v~ 160 (274)
T 2iq1_A 81 EIDKAFSSHARLSADATLLTSGTTATVALLRDGIELVVASVGDSRAILCRKGKPMKLTIDHTPERKDEKERIKKCGGFVA 160 (274)
T ss_dssp HHHHHHHHHHHC---CCGGGCEECEEEEEEETTTEEEEEEESSCEEEEEETTEEEECCCCCCTTSHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHhhhccccCCCCCCCcEEEEEEECCCEEEEEEecCceEEEEeCCEeeECCCCCCCcCHHHHHHHHHcCCEEE
Confidence 999999876532 1245778888877764 68999999999999999999999999999984 9999999998887
Q ss_pred cCCCCcCccCCcccccccccCcCccCc-cccCCceEEEEeCCC-CeEEEEecCCCCCCCCCHHHHHHhhcCCCCHHHHHH
Q 022320 198 SLPGDVPRVNGQLAVARAFGDQSLKAH-LSSEPDVRHVPIDPS-IEFLILASDGLWKQVMKNQEAVDLVKPIKDPQAAAK 275 (299)
Q Consensus 198 ~~~~~~~~~~~~~~ltr~lG~~~~~~~-v~~~p~~~~~~l~~g-~d~llL~SDGv~d~~l~~~~i~~i~~~~~~~~~~a~ 275 (299)
......++.++++.+||+||+..+|+. +..+|++..+++.++ +++|||||||||| +++++++.+++....+|+++|+
T Consensus 161 ~~~~~~~~~~~~~~ltralGd~~~k~~~v~~~pdi~~~~l~~g~d~~lll~SDGl~d-~l~~~ei~~~~~~~~~~~~~a~ 239 (274)
T 2iq1_A 161 WNSLGQPHVNGRLAMTRSIGDLDLKTSGVIAEPETKRIKLHHADDSFLVLTTDGINF-MVNSQEICDFVNQCHDPNEAAH 239 (274)
T ss_dssp ECTTSCEEETTTBSCSBCEECGGGTTTTCBCCCEEEEEECCTTTEEEEEEECHHHHT-TCCHHHHHHHHHTSSSHHHHHH
T ss_pred cCCCCceeECCeEeeccccCChhhccCCEEeCCEEEEEEeCCCCCcEEEEEccCccc-CCCHHHHHHHHHHcCCHHHHHH
Confidence 533222355778899999999988875 678999999999985 4699999999999 9999999999998889999999
Q ss_pred HHHHHHHhCCCCCCcEEEEEEeC
Q 022320 276 RLTTEALARKSKDDISCIVIRFG 298 (299)
Q Consensus 276 ~L~~~a~~~~~~DNiTvivv~~~ 298 (299)
.|++.|+++++.||+|+|||+|.
T Consensus 240 ~L~~~A~~~g~~DNiTvivv~~~ 262 (274)
T 2iq1_A 240 AVTEQAIQYGTEDNSTAVVVPFG 262 (274)
T ss_dssp HHHHHHHHTTCCSCEEEEEEECT
T ss_pred HHHHHHHHcCCCCCeEEEEEEcc
Confidence 99999999999999999999986
No 3
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae}
Probab=100.00 E-value=3e-48 Score=344.66 Aligned_cols=258 Identities=31% Similarity=0.510 Sum_probs=209.5
Q ss_pred CCCCCCCcccCCCCceeEEEEeeccCCCCCCCceEEEEeeccCCceeEEEEEEcCCCCChHHHHHHHHHHHHHHhccCC-
Q 022320 33 SSDTGKGRSKSSSNKVSHGYHLVEGQSGHDMEDYLVAEYRKKKNHVLGLFAIFDGHLGDRVPTYLKDNLFNNILEESNF- 111 (299)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~s~~G~r~~~neD~~~~~~~~~~~~~~~l~~V~DG~GG~~~a~~~~~~~~~~~~~~~~~- 111 (299)
.|...+......+.+|.+|+++++|.|. .|||++++.... +....+|+|||||||+.+++++++.+...+.+...+
T Consensus 8 ~p~~~~~~~~~~~~~~~~~~~s~~G~R~-~nED~~~~~~~~--~~~~~l~~V~DGhGG~~~a~~as~~~~~~l~~~~~~~ 84 (304)
T 2i0o_A 8 EPLTTKDSSDESNEFLASGSSSMQGWRI-SQEDAHNCILNF--DDQCSFFAVYDGHGGAEVAQYCSLHLPTFLKTVEAYG 84 (304)
T ss_dssp CCCEEEEEEEEECSSEEEEEEEEEESSS-CCCEEEEEEEEE--ETTEEEEEEEECSSCSHHHHHHHHHHHHHHHHSHHHH
T ss_pred CCcccccccccCCCceEEEEeecCCCCC-CccCEEEEEecc--CCCeEEEEEEcCCCCHHHHHHHHHHHHHHHHhhhhcc
Confidence 3444443333335579999999999987 899999765432 235689999999999999999999998888764321
Q ss_pred CccHHHHHHHHHHHHHHHHHhhc----------------cccCCCCcceEEEEEEeCCeEEEEEccCceeEEEecCcccc
Q 022320 112 WKDPKAAITNAYRSTDQFILENS----------------MQLGPGGSTAVTAIVIDGKDLWVANVGDSRAVVCERGSANQ 175 (299)
Q Consensus 112 ~~~~~~~l~~~~~~~~~~l~~~~----------------~~~~~~~~tt~~~~~i~~~~l~~a~vGDsr~~l~r~~~~~~ 175 (299)
..++...|+++|..+++.+.... ......+|||++++++.++++|++||||||+|++|+|++++
T Consensus 85 ~~~~~~~l~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~GtT~~~~~i~~~~l~vanvGDSRa~l~r~g~~~~ 164 (304)
T 2i0o_A 85 RKEFEKALKEAFLGFDATLLQEKVIEELKVLSGDSAGSDAEPGKDSGCTAVVALLHGKDLYVANAGDSRCVVCRNGKALE 164 (304)
T ss_dssp TTCHHHHHHHHHHHHHHHTTSHHHHHHHHHHHCC-----CCTTTSCEEEEEEEEEETTEEEEEEESSCEEEEEETTEEEE
T ss_pred cccHHHHHHHHHHHHHHHHHhhhhHHHHhhhccccccccccCCCCCCccEEEEEEECCEEEEEEccCcEEEEEECCEEEE
Confidence 24578899999999999886532 11245689999999999999999999999999999999999
Q ss_pred cccCCCChh--HHHHHHHcCCeeecCCCCcCccCCcccccccccCcCccC---------ccccCCceEEEEeCCCCeEEE
Q 022320 176 ITVDHEPHA--ERRRIEKQGGFVTSLPGDVPRVNGQLAVARAFGDQSLKA---------HLSSEPDVRHVPIDPSIEFLI 244 (299)
Q Consensus 176 lt~dh~~~~--e~~rl~~~gg~~~~~~~~~~~~~~~~~ltr~lG~~~~~~---------~v~~~p~~~~~~l~~g~d~ll 244 (299)
||+||++.+ |+.||...||.+... .+.++.+.+||+||+..+|. .|.+.|++..+++.++|.|||
T Consensus 165 LT~DH~~~~~~e~~rI~~~gg~v~~~----~rv~g~l~ltRalGd~~~k~~~~l~~~~~~v~~~pdi~~~~l~~~D~fll 240 (304)
T 2i0o_A 165 MSFDHKPEDTVEYQRIEKAGGRVTLD----GRVNGGLNLSRAIGDHGYKMNKSLPAEEQMISALPDIEKITVGPEDEFMV 240 (304)
T ss_dssp CCCCCCTTSHHHHHHHHHTTCCBCTT----SCBTTSCSCSBCEECGGGCCCTTSCGGGSSSBCCCEEEEEECCTTEEEEE
T ss_pred cCCCcCCcCHHHHHHHHhCCCEEEeC----CeEcCceeccccccCHHHccCccCCccCCeEEeeCeEEEEEcCCCCeEEE
Confidence 999999997 889999999987621 46677889999999988763 357899999999999855789
Q ss_pred EecCCCCCCCCCHHHHHHhhcC-----CCCHHHHHHHHHHHHHh------CCCCCCcEEEEEEeC
Q 022320 245 LASDGLWKQVMKNQEAVDLVKP-----IKDPQAAAKRLTTEALA------RKSKDDISCIVIRFG 298 (299)
Q Consensus 245 L~SDGv~d~~l~~~~i~~i~~~-----~~~~~~~a~~L~~~a~~------~~~~DNiTvivv~~~ 298 (299)
|||||||| +++++++.+++.. ..+++.+|+.|++.|++ .++.||+|+|||+|+
T Consensus 241 L~SDGl~d-~l~~~ei~~~v~~~~~~~~~~~~~~a~~L~~~a~~~~~~g~~g~~DNiTvivv~~~ 304 (304)
T 2i0o_A 241 LACDGIWN-FMTSEQVVQFVQERINKPGMKLSKICEELFDHCLAPHTRGDGTGCDNMTAIIVQFK 304 (304)
T ss_dssp EECHHHHT-TCCHHHHHHHHHHHHTSTTCCHHHHHHHHHHHHC------------CEEEEEEEEC
T ss_pred EECcCccc-cCCHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHhhhccCCCCCCCeEEEEEEeC
Confidence 99999999 9999999999975 57899999999999986 357899999999985
No 4
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3zvu_B* 3ujg_B 3nmt_B* 4ds8_B* 3rt0_A 3kb3_B*
Probab=100.00 E-value=6.4e-48 Score=346.88 Aligned_cols=247 Identities=34% Similarity=0.444 Sum_probs=211.1
Q ss_pred eEEEEeeccCCCCCCCceEEEEeecc------------------CCceeEEEEEEcCCCCChHHHHHHHHHHHHHHhccC
Q 022320 49 SHGYHLVEGQSGHDMEDYLVAEYRKK------------------KNHVLGLFAIFDGHLGDRVPTYLKDNLFNNILEESN 110 (299)
Q Consensus 49 ~~~~~s~~G~r~~~neD~~~~~~~~~------------------~~~~~~l~~V~DG~GG~~~a~~~~~~~~~~~~~~~~ 110 (299)
.||++|++|+|+ .|||++++..... ......+|+|||||||+.+++++++.+...+.+...
T Consensus 15 ~~G~~s~~G~R~-~nEDa~~~~~~~~~~p~~~~~~~~~g~~~~~~~~~~~l~~V~DGhGG~~~~~~as~~~~~~l~~~~~ 93 (337)
T 3qn1_B 15 LWGTVSIQGNRS-EMEDAFAVSPHFLKLPIKMLMGDHEGMSPSLTHLTGHFFGVYDGHGGHKVADYCRDRLHFALAEEIE 93 (337)
T ss_dssp CEEEEEECTTSS-SCCEEEEEEEEEEEEEGGGTC----------CEEEEEEEEEEEEESSSHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEeeeCCc-hhhhHHHHHhhhhcccchhcccccccccccccCCCeEEEEEEeCCCChhHHHHHHHHHHHHHHHHHH
Confidence 499999999998 8999998753311 112568999999999999999999988887765311
Q ss_pred --------------CCccHHHHHHHHHHHHHHHHHhhcc-------------ccCCCCcceEEEEEEeCCeEEEEEccCc
Q 022320 111 --------------FWKDPKAAITNAYRSTDQFILENSM-------------QLGPGGSTAVTAIVIDGKDLWVANVGDS 163 (299)
Q Consensus 111 --------------~~~~~~~~l~~~~~~~~~~l~~~~~-------------~~~~~~~tt~~~~~i~~~~l~~a~vGDs 163 (299)
....+...|+++|..+++.+..... .....+|||++++++.++++|++|||||
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~GtT~~~~~i~~~~l~~anvGDS 173 (337)
T 3qn1_B 94 RIKDELCKRNTGEGRQVQWDKVFTSCFLTVDGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGDS 173 (337)
T ss_dssp HTC------------CHHHHHHHHHHHHHHHHHHHTSSCBCCTTCSSCBCCCSSCTTCEECEEEEEECSSEEEEEEESSC
T ss_pred hhhhhhhccccccchHHHHHHHHHHHHHHhhHHHHhhhhccccccccccccccccCCCCceEEEEEEECCEEEEEeccCc
Confidence 1235678999999999999987651 1135689999999999999999999999
Q ss_pred eeEEEecCcccccccCCCChh--HHHHHHHcCCeeecCCCCcCccCCcccccccccCcCccCccccCCceEEEEeCCCCe
Q 022320 164 RAVVCERGSANQITVDHEPHA--ERRRIEKQGGFVTSLPGDVPRVNGQLAVARAFGDQSLKAHLSSEPDVRHVPIDPSIE 241 (299)
Q Consensus 164 r~~l~r~~~~~~lt~dh~~~~--e~~rl~~~gg~~~~~~~~~~~~~~~~~ltr~lG~~~~~~~v~~~p~~~~~~l~~g~d 241 (299)
|+|++|++++.+||+||++.+ |..||...|+.+.... ..+.++.+.+||+||+..+++.+.++|++..+++.+.+|
T Consensus 174 R~~l~r~g~~~~lT~DH~~~~~~e~~ri~~~gg~v~~~~--~~r~~g~l~~sRalGd~~~~~~v~~~pdv~~~~~~~~~d 251 (337)
T 3qn1_B 174 RAVLFRGKEAMPLSVDHKPDREDEYARIENAGGKVIQWQ--GARVFGVLAMSRSIGDRYLKPYVIPEPEVTFMPRSREDE 251 (337)
T ss_dssp EEEEEETTEEEESCCCCCTTSHHHHHHHHHTTCCEEESS--SEEETTTBSCSBCEECGGGTTTSBCCCEEEEEECCTTEE
T ss_pred EEEEEeCCEeeeecCCCCCCCHHHHHHHHHcCCeEEecC--CceecCccccccccccccccCCCCCcceEEEEEeCCCCC
Confidence 999999999999999999997 8999999999887432 247788889999999999999999999999999866569
Q ss_pred EEEEecCCCCCCCCCHHHHHHhhcC---------------------CCCHHHHHHHHHHHHHhCCCCCCcEEEEEEeCC
Q 022320 242 FLILASDGLWKQVMKNQEAVDLVKP---------------------IKDPQAAAKRLTTEALARKSKDDISCIVIRFGQ 299 (299)
Q Consensus 242 ~llL~SDGv~d~~l~~~~i~~i~~~---------------------~~~~~~~a~~L~~~a~~~~~~DNiTvivv~~~~ 299 (299)
+|||||||||| ++++++|.+++.. ..+++.+|+.|++.|+.+|+.||||||||+|+.
T Consensus 252 ~llL~SDGl~d-~l~~~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~Lv~~A~~~g~~DNiTvivv~l~~ 329 (337)
T 3qn1_B 252 CLILASDGLWD-VMNNQEVCEIARRRILMWHKKNGAPPLAERGKGIDPACQAAADYLSMLALQKGSKDNISIIVIDLKA 329 (337)
T ss_dssp EEEEECHHHHT-TSCHHHHHHHHHHHHHHHHHHHCCC----CCSSCCHHHHHHHHHHHHHHHHTTCCSCEEEEEEECCS
T ss_pred EEEEEecCccc-CCCHHHHHHHHHHHhhhhccccccccccccccccChhHHHHHHHHHHHHHHcCCCCCEEEEEEEecC
Confidence 99999999999 9999999999974 356789999999999999999999999999863
No 5
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A
Probab=100.00 E-value=8.9e-48 Score=350.54 Aligned_cols=247 Identities=30% Similarity=0.514 Sum_probs=211.9
Q ss_pred CCceeEEEEeeccCCCCCCCceEEEEeeccC-CceeEEEEEEcCCCCChHHHHHHHHHHHHHHhccC--------CCccH
Q 022320 45 SNKVSHGYHLVEGQSGHDMEDYLVAEYRKKK-NHVLGLFAIFDGHLGDRVPTYLKDNLFNNILEESN--------FWKDP 115 (299)
Q Consensus 45 ~~~~~~~~~s~~G~r~~~neD~~~~~~~~~~-~~~~~l~~V~DG~GG~~~a~~~~~~~~~~~~~~~~--------~~~~~ 115 (299)
...|.||+++++|+|. .|||++++...... .....+|+|||||||+.+|+++++.++..+..... ....+
T Consensus 19 ~~~l~~g~~s~~G~R~-~nEDa~~~~~~~~~~~~~~~lf~V~DGhGG~~aa~~as~~l~~~l~~~~~~~~~~~~~~~~~~ 97 (382)
T 1a6q_A 19 GNGLRYGLSSMQGWRV-EMEDAHTAVIGLPSGLESWSFFAVYDGHAGSQVAKYCCEHLLDHITNNQDFKGSAGAPSVENV 97 (382)
T ss_dssp ETTEEEEEEEEEETSS-SCCEEEEEEEEETTTEEEEEEEEEEEEESCSHHHHHHHHHHHHHHHTSHHHHCSSSSCCHHHH
T ss_pred CCceEEEEEecCCCCC-CCCceeEEecCCCCCCCCeEEEEEEcCCCcHHHHHHHHHHHHHHHHhhhhhhccCCCCCHHHH
Confidence 4569999999999987 89999987543221 23568999999999999999999999888864211 12345
Q ss_pred HHHHHHHHHHHHHHHHhhcc--ccCCCCcceEEEEEEeCCeEEEEEccCceeEEEecCcccccccCCCChh--HHHHHHH
Q 022320 116 KAAITNAYRSTDQFILENSM--QLGPGGSTAVTAIVIDGKDLWVANVGDSRAVVCERGSANQITVDHEPHA--ERRRIEK 191 (299)
Q Consensus 116 ~~~l~~~~~~~~~~l~~~~~--~~~~~~~tt~~~~~i~~~~l~~a~vGDsr~~l~r~~~~~~lt~dh~~~~--e~~rl~~ 191 (299)
...|+++|..+++.|..... .....+|||++++++.++++|++||||||+|++|+|++.+||+||++.+ |+.||..
T Consensus 98 ~~~l~~af~~~n~~i~~~~~~~~~~~~~GtT~~~~li~~~~l~vanvGDSRayl~r~g~~~~LT~DHs~~~~~E~~RI~~ 177 (382)
T 1a6q_A 98 KNGIRTGFLEIDEHMRVMSEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSNPLEKERIQN 177 (382)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCCCCEECEEEEEECSSEEEEEEESSCEEEEEETTEEEEECCCCCTTSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhhhhccCCCCCcceEEEEEEECCeEEEEEcCCCeEEEEECCceEEeCCCCCCCCHHHHHHHHh
Confidence 78899999999999987643 2235689999999999999999999999999999999999999999997 8899999
Q ss_pred cCCeeecCCCCcCccCCcccccccccCcCccC---------ccccCCceEEEEeC-CCCeEEEEecCCCCCCCCCHHHHH
Q 022320 192 QGGFVTSLPGDVPRVNGQLAVARAFGDQSLKA---------HLSSEPDVRHVPID-PSIEFLILASDGLWKQVMKNQEAV 261 (299)
Q Consensus 192 ~gg~~~~~~~~~~~~~~~~~ltr~lG~~~~~~---------~v~~~p~~~~~~l~-~g~d~llL~SDGv~d~~l~~~~i~ 261 (299)
.||.+.. .+.++.+.+||+||+..+|. .|.+.|++..+++. +++++|||||||||| +++++++.
T Consensus 178 ~gg~v~~-----~Rv~g~l~ltRalGd~~~K~~~~~~~~~~~v~~~Pdv~~~~l~~~~dd~llLaSDGlwd-~ls~~ei~ 251 (382)
T 1a6q_A 178 AGGSVMI-----QRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILACDGIWD-VMGNEELC 251 (382)
T ss_dssp TTCCEET-----TEETTTBSCSBCEECGGGSCCTTCCGGGSSSBCCCEEEEEECCTTTEEEEEEECHHHHT-TSCHHHHH
T ss_pred cCcEEec-----ccccCceeeeeecCcHhhcccccCCCccCeeeeeeeEEEEEccCCCCeEEEEeccCccC-CCChHHHH
Confidence 9998773 36778889999999988763 36789999999999 766899999999999 99999999
Q ss_pred HhhcC----CCCHHHHHHHHHHHHHhCCCCCCcEEEEEEeC
Q 022320 262 DLVKP----IKDPQAAAKRLTTEALARKSKDDISCIVIRFG 298 (299)
Q Consensus 262 ~i~~~----~~~~~~~a~~L~~~a~~~~~~DNiTvivv~~~ 298 (299)
+++.. ..+++.+|+.|++.|+.+++.||+|||||+|.
T Consensus 252 ~~v~~~~~~~~~~~~~a~~Lv~~A~~~g~~DNiTvivv~~~ 292 (382)
T 1a6q_A 252 DFVRSRLEVTDDLEKVCNEVVDTCLYKGSRDNMSVILICFP 292 (382)
T ss_dssp HHHHHHHTTCCCHHHHHHHHHHHHHHTTCCSCEEEEEEECT
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHhcCCcCCEEEEEEEec
Confidence 99975 57899999999999999999999999999985
No 6
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A
Probab=100.00 E-value=7.8e-47 Score=345.81 Aligned_cols=247 Identities=29% Similarity=0.466 Sum_probs=213.8
Q ss_pred ceeEEEEeeccCCCCCCCceEEEEeeccCCceeEEEEEEcCCCCChHHHHHHHHHHHHHHhccCCCccHHHHHHHHHHHH
Q 022320 47 KVSHGYHLVEGQSGHDMEDYLVAEYRKKKNHVLGLFAIFDGHLGDRVPTYLKDNLFNNILEESNFWKDPKAAITNAYRST 126 (299)
Q Consensus 47 ~~~~~~~s~~G~r~~~neD~~~~~~~~~~~~~~~l~~V~DG~GG~~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 126 (299)
.+.+|+.+++|+|. .|||++++.. ...+..+|+|||||||+.+++++++.+...+.+.......+...|+.+|..+
T Consensus 121 ~~~~g~~s~~G~R~-~NED~~~~~~---~~~~~~l~~VaDG~GG~~~g~~as~~~~~~l~~~~~~~~~~~~~l~~a~~~~ 196 (389)
T 4da1_A 121 LENVGCASQIGKRK-ENEDRFDFAQ---LTDEVLYFAVYDGHGGPAAADFCHTHMEKCIMDLLPKEKNLETLLTLAFLEI 196 (389)
T ss_dssp GGGCEEEEECTTSS-SCCEEEEEEE---CSSSEEEEEEEEEESSTHHHHHHHHHHHHHHHHHTTTCCCHHHHHHHHHHHH
T ss_pred ceeEEEecCCCCCC-CCcceeeeee---cCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHhccccCHHHHHHHHHHHH
Confidence 46789999999977 8999998642 1245689999999999999999999988888776555667889999999999
Q ss_pred HHHHHhhcccc----CCCCcceEEEEEEeCC-eEEEEEccCceeEEEecCcccccccCCCChh--HHHHHHHcCCeeecC
Q 022320 127 DQFILENSMQL----GPGGSTAVTAIVIDGK-DLWVANVGDSRAVVCERGSANQITVDHEPHA--ERRRIEKQGGFVTSL 199 (299)
Q Consensus 127 ~~~l~~~~~~~----~~~~~tt~~~~~i~~~-~l~~a~vGDsr~~l~r~~~~~~lt~dh~~~~--e~~rl~~~gg~~~~~ 199 (299)
++.+....... ...+|||++++++.++ ++|++||||||+|++|+|++.+||+||++.+ |++||.+.||.+...
T Consensus 197 n~~i~~~~~~~~~~~~~~~GtT~~~~li~~~~~l~vanvGDSRayl~r~g~~~~LT~DHs~~~~~E~~Ri~~~gG~v~~~ 276 (389)
T 4da1_A 197 DKAFSSHARLSADATLLTSGTTATVALLRDGIELVVASVGDSRAILCRKGKPMKLTIDHTPERKDEKERIKKCGGFVAWN 276 (389)
T ss_dssp HHHHHHHHHHSSCGGGGGCEECEEEEEEETTTEEEEEEESSCEEEEEETTEEEECCCCCCTTSHHHHHHHHHHTCCEECC
T ss_pred HHHHHHHhhhccccccCCCCCeEEEEEEEcCCeEEEEEeeccEEEEEECCEeEEeCCCCCCCCHHHHHHHHHcCCeEecc
Confidence 99998765332 2346788777777665 9999999999999999999999999999986 899999999998865
Q ss_pred CCCcCccCCcccccccccCcCccCc-cccCCceEEEEeCCC-CeEEEEecCCCCCCCCCHHHHHHhhcCCCCHHHHHHHH
Q 022320 200 PGDVPRVNGQLAVARAFGDQSLKAH-LSSEPDVRHVPIDPS-IEFLILASDGLWKQVMKNQEAVDLVKPIKDPQAAAKRL 277 (299)
Q Consensus 200 ~~~~~~~~~~~~ltr~lG~~~~~~~-v~~~p~~~~~~l~~g-~d~llL~SDGv~d~~l~~~~i~~i~~~~~~~~~~a~~L 277 (299)
....++.++.+.+||+||+..+|+. +.+.|++..+++..+ +++|||||||||| +++++++.+++....+++++|+.|
T Consensus 277 ~~~~~~~~g~l~ltRalGd~~~k~~~v~~~pdi~~~~l~~~~dd~llL~SDGL~d-~l~~~ei~~il~~~~~~~~~a~~L 355 (389)
T 4da1_A 277 SLGQPHVNGRLAMTRSIGDLDLKTSGVIAEPETKRIKLHHADDSFLVLTTDGINF-MVNSQEICDFVNQCHDPNEAAHAV 355 (389)
T ss_dssp ---CCEETTTBSCSBCEECGGGGGGTCBCCCEEEEEECCSSSCEEEEEECHHHHT-TCCHHHHHHHHHHSSSHHHHHHHH
T ss_pred cCCCccCCCeEeeEeeeCChhhccCCCCCCCceEEEEEcCCCCcEEEEEeCCccc-CCCHHHHHHHHHhcCCHHHHHHHH
Confidence 5555678889999999999988875 678999999999875 5899999999999 999999999998888999999999
Q ss_pred HHHHHhCCCCCCcEEEEEEeC
Q 022320 278 TTEALARKSKDDISCIVIRFG 298 (299)
Q Consensus 278 ~~~a~~~~~~DNiTvivv~~~ 298 (299)
++.|+.+++.||+|||||+|.
T Consensus 356 v~~A~~~g~~DNiTvivv~~~ 376 (389)
T 4da1_A 356 TEQAIQYGTEDNSTAVVVPFG 376 (389)
T ss_dssp HHHHHHHTCCSCEEEEEEEEC
T ss_pred HHHHHHcCCCCCeEEEEEEec
Confidence 999999999999999999986
No 7
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B*
Probab=100.00 E-value=3.4e-47 Score=339.59 Aligned_cols=245 Identities=32% Similarity=0.478 Sum_probs=205.4
Q ss_pred eeEEEEeeccCCCCCCCceEEEEeecc-------------CCceeEEEEEEcCCCCChHHHHHHHHHHHHHHhcc----C
Q 022320 48 VSHGYHLVEGQSGHDMEDYLVAEYRKK-------------KNHVLGLFAIFDGHLGDRVPTYLKDNLFNNILEES----N 110 (299)
Q Consensus 48 ~~~~~~s~~G~r~~~neD~~~~~~~~~-------------~~~~~~l~~V~DG~GG~~~a~~~~~~~~~~~~~~~----~ 110 (299)
..||+++++|+|+ .|||++++..... ......+|+|||||||+.+++++++.+...+.+.. .
T Consensus 9 ~~~g~~s~~G~R~-~nEDa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~DG~GG~~~~~~as~~~~~~l~~~~~~~~~ 87 (316)
T 3kdj_B 9 PLYGFTSICGRRP-EMEDAVSTIPRFLQSSSGSMLDGRFDPQSAAHFFGVYDGHGGSQVANYCRERMHLALAEEIAKEKP 87 (316)
T ss_dssp -CEEEEEECTTSS-SCCEEEEEETTCC-----------CCGGGGCEEEEEEEEESSSHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred CeEEEEEeEeCCC-CCccceeeecccccccccccccccccCCCCeEEEEEEeCCCcHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 6799999999998 8999998642210 11356899999999999999999998888776532 1
Q ss_pred C-------CccHHHHHHHHHHHHHHHHHhhccccCCCCcceEEEEEEeCCeEEEEEccCceeEEEecCcccccccCCCCh
Q 022320 111 F-------WKDPKAAITNAYRSTDQFILENSMQLGPGGSTAVTAIVIDGKDLWVANVGDSRAVVCERGSANQITVDHEPH 183 (299)
Q Consensus 111 ~-------~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~tt~~~~~i~~~~l~~a~vGDsr~~l~r~~~~~~lt~dh~~~ 183 (299)
. .+.+...++++|..+++.+.... ...+|||++++++.++++|++|+||||+|++|++++.+||+||++.
T Consensus 88 ~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~---~~~~GtT~~~~~i~~~~l~vanvGDSR~yl~r~g~~~~lT~DH~~~ 164 (316)
T 3kdj_B 88 MLSDGDTWLEKWKKALFNSFLRVDSEIESVA---PETVGSTSVVAVVFPSHIFVANCGDSRAVLCRGKTALPLSVDHKPD 164 (316)
T ss_dssp CGGGTHHHHHHHHHHHHHHHHHHHHHGGGTS---CTTCEECEEEEEECSSEEEEEEESSCEEEEEETTEEEESCCCCCTT
T ss_pred ccccccchHHHHHHHHHHHHHHHHHHHhccc---CCCCCCcEEEEEEECCEEEEEEccCCEEEEEECCEecccCCCCCCC
Confidence 1 12357788888888888875432 2468999999999999999999999999999999999999999999
Q ss_pred h--HHHHHHHcCCeeecCCCCcCccCCcccccccccCcCccCccccCCceEEEEeCCCCeEEEEecCCCCCCCCCHHHHH
Q 022320 184 A--ERRRIEKQGGFVTSLPGDVPRVNGQLAVARAFGDQSLKAHLSSEPDVRHVPIDPSIEFLILASDGLWKQVMKNQEAV 261 (299)
Q Consensus 184 ~--e~~rl~~~gg~~~~~~~~~~~~~~~~~ltr~lG~~~~~~~v~~~p~~~~~~l~~g~d~llL~SDGv~d~~l~~~~i~ 261 (299)
+ |+.|+...|+.+.... ..+.++.+.+||+||+..+++.+.++|++..+++.+.+|+|||||||||| +++++++.
T Consensus 165 ~~~e~~ri~~~~g~v~~~~--~~r~~g~l~~sRalGd~~~~~~~~~~pdv~~~~~~~~~d~llL~SDGl~d-~l~~~ei~ 241 (316)
T 3kdj_B 165 REDEAARIEAAGGKVIQWN--GARVFGVLAMSRSIGDRYLKPSIIPDPEVTAVKRVKEDDCLILASDGVWD-VMTDEEAC 241 (316)
T ss_dssp SHHHHHHHHHTTCCEEESS--SEEETTTBSCSBCEECGGGTTTSBCCCEEEEEECCTTEEEEEEECHHHHT-SSCHHHHH
T ss_pred CHHHHHHHHHcCCeEEecC--CceEcceeccccccCccccCCCcCCCCceEEEEecCCCCEEEEEccCccc-CCCHHHHH
Confidence 7 8999999999887432 24778888999999999999999999999999944445999999999999 99999999
Q ss_pred HhhcC---------------------------CCCHHHHHHHHHHHHHhCCCCCCcEEEEEEeCC
Q 022320 262 DLVKP---------------------------IKDPQAAAKRLTTEALARKSKDDISCIVIRFGQ 299 (299)
Q Consensus 262 ~i~~~---------------------------~~~~~~~a~~L~~~a~~~~~~DNiTvivv~~~~ 299 (299)
+++.. ..+++.+|+.|++.|+.+|+.||+|||||+|..
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~Lv~~A~~~g~~DNiTvivv~l~~ 306 (316)
T 3kdj_B 242 EMARKRILLWHKKNAVAGGASLLADERRKEGKDPAAMSAAEYLSKLAIQRGSKDNISVVVVDLKP 306 (316)
T ss_dssp HHHHHHHHHHTTC-----------------CCCHHHHHHHHHHHHHHHHTTCCSCEEEEEEECSC
T ss_pred HHHHHHhhhhccccccccccccccccccccccCchHHHHHHHHHHHHHHcCCCCCeEEEEEEccC
Confidence 99864 235788999999999999999999999999863
No 8
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii}
Probab=100.00 E-value=6.9e-46 Score=336.23 Aligned_cols=243 Identities=29% Similarity=0.413 Sum_probs=201.1
Q ss_pred ceeEEEEeeccCCCCCCCceEEEEeeccCCceeEEEEEEcCCCCChHHHHHHHHHHHHHHhccCCCccHHHHHHHHHHHH
Q 022320 47 KVSHGYHLVEGQSGHDMEDYLVAEYRKKKNHVLGLFAIFDGHLGDRVPTYLKDNLFNNILEESNFWKDPKAAITNAYRST 126 (299)
Q Consensus 47 ~~~~~~~s~~G~r~~~neD~~~~~~~~~~~~~~~l~~V~DG~GG~~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 126 (299)
.+.++.++++|+|. .|||++++.......++..||+|||||||..+|+++++.+...+.+...+ ....|+++|..+
T Consensus 12 ~~~~~~~s~~G~R~-~nED~~~v~~~~~~~~~~~lf~VfDGHGG~~as~~a~~~l~~~l~~~~~~---~~~~l~~a~~~~ 87 (364)
T 2isn_A 12 YTTTVAATMLGRRP-TDEDAILVSAPATSRPNVRIKAVFDGHAGEATSQYCAKHAAKHLGKLSEF---TFAEVKKACLSL 87 (364)
T ss_dssp TEEEEEEEECTTSS-SCCEEEEEECC----CCEEEEEEEEEESCSHHHHHHHHHHHHHHTTCSSC---CHHHHHHHHHHH
T ss_pred ceEEEEEEcCCCCC-cCCCeeEEeccCCCCCCeEEEEEEECCCCHHHHHHHHHHHHHHHHHhhcc---cHHHHHHHHHHH
Confidence 38899999999977 89999987543323456789999999999999999999999887654322 257899999999
Q ss_pred HHHHHhhccccCCCCcceEEEEEEeC------------------------------------------------------
Q 022320 127 DQFILENSMQLGPGGSTAVTAIVIDG------------------------------------------------------ 152 (299)
Q Consensus 127 ~~~l~~~~~~~~~~~~tt~~~~~i~~------------------------------------------------------ 152 (299)
++.+....... ..+|||++++++.+
T Consensus 88 d~~i~~~~~~~-~~~GtT~v~~~i~~~~~p~~~~~~g~~~~~~~~~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (364)
T 2isn_A 88 DAEIIRKLGPK-HVAGSTGIIVAIERLSAPVVENVVGREIVPRAHEETFVPLEKLIQEEEEAEHPELVGRYPRVPDVQQK 166 (364)
T ss_dssp HHHHHHHHCSS-SCCEECEEEEEEEECSSCEEEEEETTEECCC-----CCCHHHHHHHHHHC-----CCSSCCCCCCEEE
T ss_pred HHHHHHhcccC-CCCCcceehhhhhccccccccccccccccccccccchhhhhhhhhhhhhccccccccccccccccccc
Confidence 99997765433 45777777777642
Q ss_pred ------CeEEEEEccCceeEEE-ecCcccccccCCCChh--HHHHHHHcCCeeecCCCCcCccCCcccccccccCcCccC
Q 022320 153 ------KDLWVANVGDSRAVVC-ERGSANQITVDHEPHA--ERRRIEKQGGFVTSLPGDVPRVNGQLAVARAFGDQSLKA 223 (299)
Q Consensus 153 ------~~l~~a~vGDsr~~l~-r~~~~~~lt~dh~~~~--e~~rl~~~gg~~~~~~~~~~~~~~~~~ltr~lG~~~~~~ 223 (299)
.++|++||||||+|++ |+|++.+||+||++.+ |+.||.+.||.+... .+++.++.+.+||+||+..+|.
T Consensus 167 ~~~~g~~~l~vanvGDSRayl~~r~g~~~~LT~DH~~~~~~e~~rI~~~gG~v~~~--~~~rv~g~l~ltRalGd~~~k~ 244 (364)
T 2isn_A 167 TIPAGSFLVTAINIGDSRATLIHSDGGLTRLSKDHKPNHPTEASRIEKAGGSVETF--DVPRVDGVLALSRAFGDSDFKM 244 (364)
T ss_dssp EECTTCEEEEEEEESSCEEEEECTTSCEEECCCCCCTTSHHHHHHHHHTTCCEEES--SSEEETTTBSCSBCEECGGGSC
T ss_pred ccccCccEEEEEECccCEEEEEeeCCEEEEcCcCCCCCCHHHHHHHHHcCCeEecC--CCcccCCceeeEEEecchhhcc
Confidence 3899999999999999 6899999999999997 788999999988742 4567677788999999988762
Q ss_pred ---------ccccCCceEEEEeCCCCeEEEEecCCCCCCCCC--HHHHHHhh-----cCCCCHHHHHHHHHHHHHhCCCC
Q 022320 224 ---------HLSSEPDVRHVPIDPSIEFLILASDGLWKQVMK--NQEAVDLV-----KPIKDPQAAAKRLTTEALARKSK 287 (299)
Q Consensus 224 ---------~v~~~p~~~~~~l~~g~d~llL~SDGv~d~~l~--~~~i~~i~-----~~~~~~~~~a~~L~~~a~~~~~~ 287 (299)
.+.+.|++..+++.++ |+|||||||||| +++ ++++.+++ ....+++++|+.|++.|+.+++.
T Consensus 245 ~~~l~~~~~~v~~~Pdv~~~~l~~~-D~llL~SDGl~d-~l~~~~~~v~~~~~~~~~~~~~~~~~~a~~Lv~~A~~~g~~ 322 (364)
T 2isn_A 245 NPNLPPEEQKVIAVPDVRQFYALSS-DLLLLACDGVYE-PSGMDWAYVRDLTVAEMQRSKGDLEEVAARVMDYAYDMNSQ 322 (364)
T ss_dssp CCSSCGGGSSSBCCCEEEEEEECTT-CEEEEECHHHHC-SSSCCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHTTCC
T ss_pred ccccCcccCceEEEeEEEEEECCCC-CEEEEEcCCCCC-CCCCCHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHhcCCC
Confidence 4568999999999998 799999999999 876 67766554 34568999999999999999999
Q ss_pred CCcEEEEEEeC
Q 022320 288 DDISCIVIRFG 298 (299)
Q Consensus 288 DNiTvivv~~~ 298 (299)
||+|+|||+|.
T Consensus 323 DNiTvivv~~~ 333 (364)
T 2isn_A 323 DNISVMLVAFH 333 (364)
T ss_dssp SCEEEEEEEEC
T ss_pred CCEEEEEEEcC
Confidence 99999999985
No 9
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii}
Probab=100.00 E-value=1.3e-45 Score=330.61 Aligned_cols=249 Identities=25% Similarity=0.402 Sum_probs=200.0
Q ss_pred ceeEEEEeeccCCCCCCCceEEEEeecc-CCceeEEEEEEcCCCCChHHHHHHHHHHHHHHhccCC--------------
Q 022320 47 KVSHGYHLVEGQSGHDMEDYLVAEYRKK-KNHVLGLFAIFDGHLGDRVPTYLKDNLFNNILEESNF-------------- 111 (299)
Q Consensus 47 ~~~~~~~s~~G~r~~~neD~~~~~~~~~-~~~~~~l~~V~DG~GG~~~a~~~~~~~~~~~~~~~~~-------------- 111 (299)
.+.+|+.+++|+|+ .|||++++..... ......+|+|||||||+.+++++++.+...+.+...+
T Consensus 21 ~~~~~~~s~~G~R~-~nED~~~~~~~~~~~~~~~~l~~V~DGhGG~~~~~~as~~~~~~l~~~~~~~~~~~~l~~~~~~~ 99 (324)
T 2i44_A 21 AFDAAIFTDIGGRK-HQEDRFTLCPQLVPGRDDCAFFGVFDGTVGDFASENVKDLVVPQLISSPAWQEVTEMLRSDVPAT 99 (324)
T ss_dssp TEEEEEEEECTTSS-SCCEEEEEESCCSTTCSSEEEEEEEEEESSSHHHHHHHHHHHHHHHTCHHHHHHHHHHTSCCCHH
T ss_pred ceEEEEEECCCCCC-ccCCeEEEEecCCCCCCCeEEEEEeCCCCchHHHHHHHHHHHHHHHhhhHHHHHHHHhhccCCcc
Confidence 48999999999976 8999998653211 2356789999999999999999999988887653111
Q ss_pred ------CccHHHHHHHHHHHHHHHHHhhcccc---CCCCcceEEEEEEeCCeEEEEEccCceeEEEec---C-ccccccc
Q 022320 112 ------WKDPKAAITNAYRSTDQFILENSMQL---GPGGSTAVTAIVIDGKDLWVANVGDSRAVVCER---G-SANQITV 178 (299)
Q Consensus 112 ------~~~~~~~l~~~~~~~~~~l~~~~~~~---~~~~~tt~~~~~i~~~~l~~a~vGDsr~~l~r~---~-~~~~lt~ 178 (299)
...+...|+++|.++|+.|.+..... ..+++||++ ++.++++|++||||||+|++|+ | ++.+||+
T Consensus 100 ~~~~~~~~~~~~~l~~a~~~~~~~i~~~~~~~~~~~~g~gtt~~--~i~~~~l~vanvGDSRa~l~r~~~~g~~~~~LT~ 177 (324)
T 2i44_A 100 EVDEKLPQLLDQAVDDMYKNADNELVKMCEQLNKDYASSTSVTA--VLAKGFVAVGHLGDSRIAMGVETPNGLNCEFLTV 177 (324)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCEECEEEE--EEETTEEEEEEESSCEEEEEEEETTEEEEEESCC
T ss_pred ccccccchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCeEEE--EEECCeEEEEEccCceEEEEeccCCCceEEECCC
Confidence 12357789999999999998775432 123344443 3679999999999999999996 7 8999999
Q ss_pred CCCChh--HHHHHHHcCCeeecCCCC---cCccCCcccccccccC----cCcc----------CccccCCceEEEEeCCC
Q 022320 179 DHEPHA--ERRRIEKQGGFVTSLPGD---VPRVNGQLAVARAFGD----QSLK----------AHLSSEPDVRHVPIDPS 239 (299)
Q Consensus 179 dh~~~~--e~~rl~~~gg~~~~~~~~---~~~~~~~~~ltr~lG~----~~~~----------~~v~~~p~~~~~~l~~g 239 (299)
||++.+ |++||.+.||.+...... ..+..|.+.++|++|+ ..++ +.+.++|++..+++.++
T Consensus 178 DH~~~~~~E~~Ri~~~Gg~v~~~~~~~~~~~~~~g~l~~sra~Gd~p~~~~~~~~~g~~~~~~~~v~~~pdv~~~~l~~~ 257 (324)
T 2i44_A 178 DHKPDMPHEKLRIMRNGGSVEYLHNHNNKPFIRGGDFSFRKSRGEQPMQLQYSRAFGGKDLKMYGLSNQPDVRVVRVTPQ 257 (324)
T ss_dssp CCCTTSHHHHHHHHHTTCEEECCTTCTTSCEEECTTHHHHHHTTCCCCCBSSSBCEECGGGTTTTCBCCCEEEEEECCTT
T ss_pred CCCCcCHHHHHHHHHcCCEEEecccccCCCccccCcccchhhcCCccccceeccccCCccccCCeEeecCEEEEEEcCCC
Confidence 999997 899999999998532111 1134677889999999 3332 23578999999999998
Q ss_pred CeEEEEecCCCCCCCCCHHHHHHhhcCC----CCHHH--HHHHHHHHHHhCCCCCCcEEEEEEeCC
Q 022320 240 IEFLILASDGLWKQVMKNQEAVDLVKPI----KDPQA--AAKRLTTEALARKSKDDISCIVIRFGQ 299 (299)
Q Consensus 240 ~d~llL~SDGv~d~~l~~~~i~~i~~~~----~~~~~--~a~~L~~~a~~~~~~DNiTvivv~~~~ 299 (299)
|++|||||||||| +++++++.+++... .++++ +|+.|++.|+.+++.||||||||+|++
T Consensus 258 d~~llLaSDGl~d-~ls~~ei~~~v~~~~~~~~~~~~~~~a~~L~~~A~~~g~~DNiTvivv~~~~ 322 (324)
T 2i44_A 258 HRVMILATDGLWD-VMSAAQAVEIAMQARQEGRNPAQALVEMTLAEQQSRNQSADNITAMTVFFKK 322 (324)
T ss_dssp EEEEEEECHHHHT-TCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHTTCCCCCEEEEEEEEC-
T ss_pred CeEEEEEcCchhc-cCCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcCCCCCCEEEEEEeeC
Confidence 4499999999999 99999999999764 68999 999999999999999999999999863
No 10
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii}
Probab=100.00 E-value=2.9e-45 Score=333.24 Aligned_cols=241 Identities=22% Similarity=0.333 Sum_probs=199.8
Q ss_pred ceeEEEEeeccCCCCCC-----CceEEEEeeccCCceeEEEEEEcCCCCChHHHHHHHHHHHHHHhccCCCccHHHHHHH
Q 022320 47 KVSHGYHLVEGQSGHDM-----EDYLVAEYRKKKNHVLGLFAIFDGHLGDRVPTYLKDNLFNNILEESNFWKDPKAAITN 121 (299)
Q Consensus 47 ~~~~~~~s~~G~r~~~n-----eD~~~~~~~~~~~~~~~l~~V~DG~GG~~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~ 121 (299)
++.+|+++++|+|+ .| ||++++........+..+|+|||||||+.+|+++++.+...+.+.. ..+.+.|++
T Consensus 12 ~~~~~~~s~~G~R~-~~ED~~neD~~~~~~~~~~~~~~~lf~V~DGhGG~~aa~~as~~l~~~l~~~~---~~~~~al~~ 87 (377)
T 3d8k_A 12 RTVCASATSRNRRP-TSESPHSDDVVVVEGMLRGRPETRVHAMFDGFQGRHSAMWLAQNVMNYLNDLR---DVNEEEITR 87 (377)
T ss_dssp HHHHHHTTTCEEEE-EECC---CEEEEEEEECSSCTTEEEEEEEEBSSSSHHHHHHHHHHHHHHTTCS---SSSHHHHHH
T ss_pred cEEEEEEEccCCCC-ccccchhcceEEEecccCCCCCeEEEEEEcCCCcHHHHHHHHHHHHHHHHHhc---ccHHHHHHH
Confidence 47788899999987 55 5566554332234667899999999999999999999999886533 234788999
Q ss_pred HHHHHHHHHHhhccccCCCCcceEEEEEEe--------------------------------------------------
Q 022320 122 AYRSTDQFILENSMQLGPGGSTAVTAIVID-------------------------------------------------- 151 (299)
Q Consensus 122 ~~~~~~~~l~~~~~~~~~~~~tt~~~~~i~-------------------------------------------------- 151 (299)
+|.++++.+..... .+|||++++++.
T Consensus 88 af~~~d~~l~~~~~----~~GtTa~~~~i~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~g~ta~a~vali~~~~p~~~~ 163 (377)
T 3d8k_A 88 QFERMDGDLRAANL----PGGSSALIIFVRYEKKPTEARVVGRQIVPEGAKEFTSVAEALGGPLMPVVAMNFRRDPRAAK 163 (377)
T ss_dssp HHHHHHHHHHHHTC----CCCBCEEEEEEEEESSCCCEEEETTEEECCC---CCCHHHHSSCCCCCCEEECGGGCGGGTT
T ss_pred HHHHHHHHHHhccc----CCCCceEEEEEeccccccccccccccccccccccccccccccccccccceeeeccccccccc
Confidence 99999999988743 466776666653
Q ss_pred -CCeEEEEEccCceeEEEecCcccccccCCCChh--HHHHHHHcCCeeecCCCCcCccCCcccccccccCcCcc------
Q 022320 152 -GKDLWVANVGDSRAVVCERGSANQITVDHEPHA--ERRRIEKQGGFVTSLPGDVPRVNGQLAVARAFGDQSLK------ 222 (299)
Q Consensus 152 -~~~l~~a~vGDsr~~l~r~~~~~~lt~dh~~~~--e~~rl~~~gg~~~~~~~~~~~~~~~~~ltr~lG~~~~~------ 222 (299)
++++|++||||||+|++|+|++.+||+||++.+ |+.||.+.|+.+....+ ..+.+|.+.+||+||+..+|
T Consensus 164 ~~~~l~vanvGDSRa~l~r~g~~~~LT~DH~~~~~~E~~RI~~~gg~v~~~~g-~~rv~G~l~vtRalGd~~~k~~~~~~ 242 (377)
T 3d8k_A 164 GIYTIHVASLGNSRCVLKSGRTAIHLSTPHTASSHKERHRVQAAGGVFTTVNG-ELLLGGVVPMTRAFGSFDFKKGGQGK 242 (377)
T ss_dssp CEEEEEEEEESSCEEEEEETTEEEESSCCCSSSSHHHHHHHHTTTCCEEECSS-SEEETTTBSCSBCSSCGGGSCC---C
T ss_pred CCCeEEEEEcccceEEEEECCEEEECCcCCCCCCHHHHHHHHHcCCEEEecCC-cEEEcCceecceeecChhhhcccccc
Confidence 148999999999999999999999999999997 99999999998763211 12677888999999999887
Q ss_pred ---CccccCCceEEEEeCCCCeEEEEecCCCCCCCCCHHHHHH-hhcC----CCCHHHHHHHHHHHHHhCCCCCCcEEEE
Q 022320 223 ---AHLSSEPDVRHVPIDPSIEFLILASDGLWKQVMKNQEAVD-LVKP----IKDPQAAAKRLTTEALARKSKDDISCIV 294 (299)
Q Consensus 223 ---~~v~~~p~~~~~~l~~g~d~llL~SDGv~d~~l~~~~i~~-i~~~----~~~~~~~a~~L~~~a~~~~~~DNiTviv 294 (299)
+.+.+.|++..+++.++ |+|||||||||| +++++++.+ ++.. ..+++.+|+.|++.|+++++.|||||||
T Consensus 243 ~~~~~v~~~Pdv~~~~l~~~-D~llL~SDGl~d-~ls~~e~v~~v~~~~~~~~~~~~~~a~~Lv~~A~~~g~~DNiTviv 320 (377)
T 3d8k_A 243 LQQDLVSAVPDVTTFFAYPG-DDIVAGTAGAFA-HFRSHAAIAAAIALYPVSPETVLDAAKAMVVNAKRRKVTKNISTFV 320 (377)
T ss_dssp CSSCSSBCCCEEEEEEECTT-CEEEEECGGGGC-SCSSHHHHHHHHTTSCCCGGGHHHHHHHHHHTTTTSSCCSCCCEEE
T ss_pred cccCccccCCcEEEEEcCCC-CEEEEEECCccc-CCCcHHHHHHHHHHhhccCCCHHHHHHHHHHHHHhcCCCCCEEEEE
Confidence 35778999999999998 899999999999 999999876 4442 4688999999999999999999999999
Q ss_pred EEeC
Q 022320 295 IRFG 298 (299)
Q Consensus 295 v~~~ 298 (299)
|+|.
T Consensus 321 v~~~ 324 (377)
T 3d8k_A 321 RHLP 324 (377)
T ss_dssp EECC
T ss_pred EEec
Confidence 9985
No 11
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae}
Probab=100.00 E-value=5.4e-44 Score=308.70 Aligned_cols=237 Identities=20% Similarity=0.275 Sum_probs=198.5
Q ss_pred CceeEEEEeeccCCCCCCCceEEEEeeccCCceeEEEEEEcCCCCChHHHHHHHHHHHHHH-hcc--CC--CccHHHHHH
Q 022320 46 NKVSHGYHLVEGQSGHDMEDYLVAEYRKKKNHVLGLFAIFDGHLGDRVPTYLKDNLFNNIL-EES--NF--WKDPKAAIT 120 (299)
Q Consensus 46 ~~~~~~~~s~~G~r~~~neD~~~~~~~~~~~~~~~l~~V~DG~GG~~~a~~~~~~~~~~~~-~~~--~~--~~~~~~~l~ 120 (299)
+.|.+++.+++|+.+..|||++++.... ++..+|+|||||||+.++.++++.+...+. +.. .. ...+...|+
T Consensus 4 ~~~~~~~~s~~G~~r~~neD~~~~~~~~---~~~~~~~V~DG~Gg~~~~~~as~~~~~~l~~~~~~~~~~~~~~~~~~l~ 80 (250)
T 2pk0_A 4 KYMEISLLTDIGQRRSNNQDFINQFENK---AGVPLIILADGMGGHRAGNIASEMTVTDLGSDWAETDFSELSEIRDWML 80 (250)
T ss_dssp CCEEEEEEEECCTTCSCCCEEEEEEECT---TCCEEEEEEEEECTTTHHHHHHHHHHHHHHHHHTTCCCCSHHHHHHHHH
T ss_pred ceEEEEEecCCCCCCCcCCCceEeccCC---CCcEEEEEEeCCCCcHHHHHHHHHHHHHHHHHHhhcccCChhhHHHHHH
Confidence 3499999999999444999999865331 356899999999999888888887777666 211 11 234677899
Q ss_pred HHHHHHHHHHHhhcccc-CCCCcceEEEEEEeCCeEEEEEccCceeEEEecCcccccccCCCChhHHHHHHHcCCeeecC
Q 022320 121 NAYRSTDQFILENSMQL-GPGGSTAVTAIVIDGKDLWVANVGDSRAVVCERGSANQITVDHEPHAERRRIEKQGGFVTSL 199 (299)
Q Consensus 121 ~~~~~~~~~l~~~~~~~-~~~~~tt~~~~~i~~~~l~~a~vGDsr~~l~r~~~~~~lt~dh~~~~e~~rl~~~gg~~~~~ 199 (299)
++|..+|+.+....... ...++||++++++.+++++++|+||||+|++|++++.+||.||++.++ +.+.|.+....
T Consensus 81 ~~~~~~~~~l~~~~~~~~~~~~gtT~~~~~i~~~~l~~anvGDsr~~l~r~g~~~~lt~dh~~~~~---~~~~g~i~~~~ 157 (250)
T 2pk0_A 81 VSIETENRKIYELGQSDDYKGMGTTIEAVAIVGDNIIFAHVGDSRIGIVRQGEYHLLTSDHSLVNE---LVKAGQLTEEE 157 (250)
T ss_dssp HHHHHHHHHHHHHHHHTTCTTCEECEEEEEEETTEEEEEEESSCEEEEEETTEEEECCCCCBHHHH---HHHTTSSCHHH
T ss_pred HHHHHHHHHHHHHHhhCCCCCCcceEEEEEEECCeEEEEEeCCCeEEEEcCCcEEEeCCCCCHHHH---HHHcCCCCHHH
Confidence 99999999998775433 356889999999999999999999999999999999999999999876 55667665543
Q ss_pred CCCcCccCCcccccccccCcCccCccccCCceEEEEeCCCCeEEEEecCCCCCCCCCHHHHHHhhcCCCCHHHHHHHHHH
Q 022320 200 PGDVPRVNGQLAVARAFGDQSLKAHLSSEPDVRHVPIDPSIEFLILASDGLWKQVMKNQEAVDLVKPIKDPQAAAKRLTT 279 (299)
Q Consensus 200 ~~~~~~~~~~~~ltr~lG~~~~~~~v~~~p~~~~~~l~~g~d~llL~SDGv~d~~l~~~~i~~i~~~~~~~~~~a~~L~~ 279 (299)
...+ ++++.+||+||+.. ...|++..+++.++ |+|||||||||| +++++++.+++....+++++++.|++
T Consensus 158 ~~~~---~~~~~ltralG~~~-----~~~p~~~~~~l~~g-d~lll~SDGl~d-~l~~~~i~~~~~~~~~~~~~a~~L~~ 227 (250)
T 2pk0_A 158 AASH---PQKNIITQSIGQAN-----PVEPDLGVHLLEEG-DYLVVNSDGLTN-MLSNADIATVLTQEKTLDDKNQDLIT 227 (250)
T ss_dssp HHTC---CSCCCBSCCBSCSS-----CCCCEEEEEECCTT-CEEEEECHHHHT-TSCHHHHHHHHTSSSCHHHHHHHHHH
T ss_pred HHhC---CCcceEEeecCCCC-----CccceEEEEEcCCC-CEEEEECCCCCC-CcCHHHHHHHHhcCCCHHHHHHHHHH
Confidence 3333 34559999999977 67999999999998 899999999999 99999999999987899999999999
Q ss_pred HHHhCCCCCCcEEEEEEeC
Q 022320 280 EALARKSKDDISCIVIRFG 298 (299)
Q Consensus 280 ~a~~~~~~DNiTvivv~~~ 298 (299)
.|+.+++.||+|+|||++.
T Consensus 228 ~a~~~g~~DniTvivv~~~ 246 (250)
T 2pk0_A 228 LANHRGGLDNITVALVYVE 246 (250)
T ss_dssp HHHHTTCCSCEEEEEEEEC
T ss_pred HHHHcCCCCCeEEEEEEee
Confidence 9999999999999999986
No 12
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A
Probab=100.00 E-value=4.6e-45 Score=335.02 Aligned_cols=247 Identities=23% Similarity=0.361 Sum_probs=204.9
Q ss_pred CceeEEEEeeccCCCC-------CCCceEEEEeeccCCceeEEEEEEcCCCCChHHHHHHHHHHHHHHhcc----CCCcc
Q 022320 46 NKVSHGYHLVEGQSGH-------DMEDYLVAEYRKKKNHVLGLFAIFDGHLGDRVPTYLKDNLFNNILEES----NFWKD 114 (299)
Q Consensus 46 ~~~~~~~~s~~G~r~~-------~neD~~~~~~~~~~~~~~~l~~V~DG~GG~~~a~~~~~~~~~~~~~~~----~~~~~ 114 (299)
..+.+|+++++|.|.. .|||++++.. ...+..||+|||||||+.+|+++++.++..+.+.. ....+
T Consensus 25 ~~~~~G~~~~~G~r~~g~~~~r~~nED~~~~~~---~~~~~~lf~V~DGhGG~~aa~~as~~l~~~l~~~~~~~~~~~~~ 101 (401)
T 2j4o_A 25 HLSGVGSASNRSYSADGKGTESHPPEDSWLKFR---SENNCFLYGVFNGYDGNRVTNFVAQRLSAELLLGQLNAEHAEAD 101 (401)
T ss_dssp TTEEEEEECCEEECSSSSCEECCCCCEEEEEEE---ETTTEEEEEEEEEESSSHHHHHHHHHHHHTTSSSSCCTTSCHHH
T ss_pred ccCceeEEecccccccccccCCCCCCceEEEec---CCCCeEEEEEEcCCCCHHHHHHHHHHHHHHHHHhhhhcccchhh
Confidence 3489999999999983 5999998542 23566899999999999999999999988876421 12335
Q ss_pred HHHHHHHHHHHHHHHHHhhcc------------------------------------ccCCCCcceEEEEEEeCCeEEEE
Q 022320 115 PKAAITNAYRSTDQFILENSM------------------------------------QLGPGGSTAVTAIVIDGKDLWVA 158 (299)
Q Consensus 115 ~~~~l~~~~~~~~~~l~~~~~------------------------------------~~~~~~~tt~~~~~i~~~~l~~a 158 (299)
+.+.|+++|..+++.+.+... .....+|||++++++.++++|++
T Consensus 102 ~~~~l~~af~~~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~GtTa~~~li~~~~l~va 181 (401)
T 2j4o_A 102 VRRVLLQAFDVVERSFLESIDDALAEKASLQSQLPEGVPQHQLPPQYQKILERLKTLEREISGGAMAVVAVLLNNKLYVA 181 (401)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCTTCCSSCSCGGGHHHHHHHHHHHHHHCCEEEEEEEEEETTEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccccccccccccccchhhhhhhcccccCCCccCEEEEEEECCEEEEE
Confidence 688899999999888765311 01235789999999999999999
Q ss_pred EccCceeEEEecC----cccccccCCCChh--HHHHHHHcCCeeecCCCCcCccCCcccccccccCcCcc----------
Q 022320 159 NVGDSRAVVCERG----SANQITVDHEPHA--ERRRIEKQGGFVTSLPGDVPRVNGQLAVARAFGDQSLK---------- 222 (299)
Q Consensus 159 ~vGDsr~~l~r~~----~~~~lt~dh~~~~--e~~rl~~~gg~~~~~~~~~~~~~~~~~ltr~lG~~~~~---------- 222 (299)
||||||+|++|++ ++++||.||++.+ |+.||.+.|+.+... ...+.++.+.+||+||+..+|
T Consensus 182 nvGDSRa~l~r~~~~g~~~~~LT~DH~~~~~~E~~Ri~~~Gg~v~~~--~~~r~~g~l~vtRalGd~~~k~~~~~~~~~~ 259 (401)
T 2j4o_A 182 NVGTNRALLCKSTVDGLQVTQLNVDHTTENEDELFRLSQLGLDAGKI--KQVGIICGQESTRRIGDYKVKYGYTDIDLLS 259 (401)
T ss_dssp EESSCEEEEEEECSSSEEEEECSCCCSTTSHHHHHHHHTTTCCHHHH--HHHCCBTTBCCSBCEECHHHHHSGGGSTTTT
T ss_pred EccCceEEEEEcCCCCceEEECCCCCCCCCHHHHHHHHHcCCCeeec--cCccccCCcccccccCCHhhccccccccccc
Confidence 9999999999988 9999999999997 899999999975321 113667778999999998765
Q ss_pred ----CccccCCceEE-EEeCCCCeEEEEecCCCCCCCC--------CHHHHHHhhcC----CCCHHHHHHHHHHHHHh--
Q 022320 223 ----AHLSSEPDVRH-VPIDPSIEFLILASDGLWKQVM--------KNQEAVDLVKP----IKDPQAAAKRLTTEALA-- 283 (299)
Q Consensus 223 ----~~v~~~p~~~~-~~l~~g~d~llL~SDGv~d~~l--------~~~~i~~i~~~----~~~~~~~a~~L~~~a~~-- 283 (299)
+.+.+.|++.. +++.++|++|||||||||| ++ +++++.+++.. ..+++.+|+.|++.|++
T Consensus 260 ~~~~~~v~~~Pdv~~~~~l~~~d~flvLaSDGlwd-~l~~~~~~~~s~~ei~~~v~~~l~~~~~~~~~a~~Lv~~A~~~~ 338 (401)
T 2j4o_A 260 AAKSKPIIAEPEIHGAQPLDGVTGFLVLMSEGLYK-ALEAAHGPGQANQEIAAMIDTEFAKQTSLDAVAQAVVDRVKRIH 338 (401)
T ss_dssp TCSSCSSBCCCEEEEEEECTTCCEEEEEECHHHHH-HHHHHHCTTCHHHHHHHHHHHHHHHCSSHHHHHHHHHHHHHHHH
T ss_pred ccCCCCeeccceEEEeEEeCCCCcEEEEEccchhh-cccccccCCCCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHhh
Confidence 45788999996 9999987799999999999 99 89999999976 47899999999999975
Q ss_pred -----CCC--------CCCcEEEEEEeC
Q 022320 284 -----RKS--------KDDISCIVIRFG 298 (299)
Q Consensus 284 -----~~~--------~DNiTvivv~~~ 298 (299)
+|+ .||||||||+|.
T Consensus 339 ~~a~~~G~~~~~~~~~~DNiTvivv~~~ 366 (401)
T 2j4o_A 339 SDTFASGGERARFCPRHEDMTLLVRNFG 366 (401)
T ss_dssp HHHHHSCSSGGGGCSEECCEEEEEEEEB
T ss_pred hhhhhcCCcccccCCCCCCeEEEEEEcC
Confidence 565 899999999985
No 13
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae}
Probab=100.00 E-value=5.8e-45 Score=330.18 Aligned_cols=236 Identities=21% Similarity=0.326 Sum_probs=197.5
Q ss_pred EeeccCCCC--CCCceEEEEeeccCCceeEEEEEEcCCCCChHHHHHHHHHHHHHHhcc----CCCccHHHHHHHHHHHH
Q 022320 53 HLVEGQSGH--DMEDYLVAEYRKKKNHVLGLFAIFDGHLGDRVPTYLKDNLFNNILEES----NFWKDPKAAITNAYRST 126 (299)
Q Consensus 53 ~s~~G~r~~--~neD~~~~~~~~~~~~~~~l~~V~DG~GG~~~a~~~~~~~~~~~~~~~----~~~~~~~~~l~~~~~~~ 126 (299)
.+.+|+|+. .|||++++.. .+.+..+|+|||||||+.+|+++++.+...+.+.. ....++...|+++|..+
T Consensus 25 ~~~~G~r~~~~~nED~~~~~~---~~~~~~lf~V~DGhGG~~aa~~as~~l~~~l~~~~l~~~~~~~~~~~~l~~a~~~~ 101 (358)
T 2irm_A 25 YKDDGRRCEGYESRDKKCLCI---SDNNTSLYAILSGHNGVTVAENALQEMAAELLLGQLNVCNTDEAVKELIRQSFMSV 101 (358)
T ss_dssp ECSSSCEEECSSCCEEEEEEE---CSSSEEEEEEEEEESCSHHHHHHHHHHHHHSSSSTTTTCCSHHHHHHHHHHHHHHH
T ss_pred eecCCCCCCCCCCCceEEEEE---CCCCEEEEEEEcCCCCHHHHHHHHHHHHHHHHHhhhccccchhhHHHHHHHHHHHH
Confidence 667999873 5999997642 23567899999999999999999999998886521 12235688999999999
Q ss_pred HHHHHhhcc-------------------------------------ccCCCCcceEEEEEEeCCeEEEEEccCceeEEEe
Q 022320 127 DQFILENSM-------------------------------------QLGPGGSTAVTAIVIDGKDLWVANVGDSRAVVCE 169 (299)
Q Consensus 127 ~~~l~~~~~-------------------------------------~~~~~~~tt~~~~~i~~~~l~~a~vGDsr~~l~r 169 (299)
++.+..... .....+|||++++++.++++|+|||||||+|++|
T Consensus 102 d~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~GtTav~~li~~~~l~vAnvGDSRa~l~r 181 (358)
T 2irm_A 102 EKGYFDSINPHVATKTAIQLHLSADGMNQYEISQQFENVLQKLDSLNNALSVGSSAVLALIHRSHLYLGNIGNCRALLCK 181 (358)
T ss_dssp HHHHHHHSHHHHHHHHHHHHTTC---------------CCCTHHHHHTTTTCEEEEEEEEEESSEEEEEEESSCEEEEEE
T ss_pred HHHHHHHHHhhhhccccccccccccccccccchhhccchhhhcccccCCCCCCCcEEEEEEECCEEEEEEcccCeEEEEE
Confidence 999876321 1224689999999999999999999999999999
Q ss_pred c---C--cccccccCCCChh--HHHHHHHcCCeeecCCCCcCccCCcccccccccCcCccC--------------ccccC
Q 022320 170 R---G--SANQITVDHEPHA--ERRRIEKQGGFVTSLPGDVPRVNGQLAVARAFGDQSLKA--------------HLSSE 228 (299)
Q Consensus 170 ~---~--~~~~lt~dh~~~~--e~~rl~~~gg~~~~~~~~~~~~~~~~~ltr~lG~~~~~~--------------~v~~~ 228 (299)
+ | ++++||+||++.+ |++||.+.|+.+.. .+.++.+ +||+||+..+|. .+.+.
T Consensus 182 ~~~~g~~~~~~LT~DH~~~~~~E~~Ri~~~Gg~v~~-----~r~~g~l-lTRalGd~~~K~~~~~~~~~~~~~~~~v~~~ 255 (358)
T 2irm_A 182 TDEHDTLTVTQLSVDHNLLNAEEAARLFRLGLMAQN-----FEGVPLY-STRCIGNYLGKAGYKDCNFLSSATAEPVIFE 255 (358)
T ss_dssp CCTTCSCEEEECSCCCBTTSHHHHHHHHTTTCCGGG-----GTTCTTC-BSBCEECHHHHTTGGGSSSSTTCSSCSSBCC
T ss_pred ecCCCceeeEeCCCCCCCCCHHHHHHHHHcCCeEec-----cCcCCEE-cccCCcCHHHhccccccccccccCCCCEecc
Confidence 8 8 9999999999998 89999999998864 2444444 999999977663 57899
Q ss_pred CceEE-EEeCCCCeEEEEecCCCCCCCCC----------HHHHHHhhcCC----CCHHHHHHHHHHHHHh----------
Q 022320 229 PDVRH-VPIDPSIEFLILASDGLWKQVMK----------NQEAVDLVKPI----KDPQAAAKRLTTEALA---------- 283 (299)
Q Consensus 229 p~~~~-~~l~~g~d~llL~SDGv~d~~l~----------~~~i~~i~~~~----~~~~~~a~~L~~~a~~---------- 283 (299)
|++.. +++.++|+||||||||||| +++ ++++.+++... .+++.+|+.|++.|++
T Consensus 256 Pdi~~~~~l~~~d~fllL~SDGl~d-~l~~~~~~~~~~~~~ei~~~v~~~~~~~~~~~~~a~~Lv~~A~~~~~~~~~~~~ 334 (358)
T 2irm_A 256 PEIVGGIQITPACRFLVLMSSGLCR-ALHEIFPGDASTGNRELVRMISEEFQNQSTLGGVAQSVVHRIVQAHHDTYMQLV 334 (358)
T ss_dssp CEEEEEEECCTTEEEEEEECHHHHH-HHHHHSCSSSSHHHHHHHHHHHHHTTTCCSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEEEeCCCCcEEEEECCCccc-CccccccccccccHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHhhhhhhcccc
Confidence 99995 9999987789999999999 999 89999999763 7899999999999976
Q ss_pred -----CC--CCCCcEEEEEEeC
Q 022320 284 -----RK--SKDDISCIVIRFG 298 (299)
Q Consensus 284 -----~~--~~DNiTvivv~~~ 298 (299)
+| +.||||||||+|+
T Consensus 335 ~~~~~~Gg~~~DNiTvivv~~~ 356 (358)
T 2irm_A 335 EEHRSVTFNSRDDVTLLIRNFN 356 (358)
T ss_dssp SSSCCCCCCEECCEEEEEEESC
T ss_pred ccccccCCCCCCCeEEEEEeCC
Confidence 46 8999999999986
No 14
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A
Probab=100.00 E-value=6.3e-43 Score=299.66 Aligned_cols=230 Identities=21% Similarity=0.240 Sum_probs=193.1
Q ss_pred ceeEEEEeeccCCCCCCCceEEEEeeccCCceeEEEEEEcCCCCChHHHHHHHHHHHHHHhccC--CCccHHHHHHHHHH
Q 022320 47 KVSHGYHLVEGQSGHDMEDYLVAEYRKKKNHVLGLFAIFDGHLGDRVPTYLKDNLFNNILEESN--FWKDPKAAITNAYR 124 (299)
Q Consensus 47 ~~~~~~~s~~G~r~~~neD~~~~~~~~~~~~~~~l~~V~DG~GG~~~a~~~~~~~~~~~~~~~~--~~~~~~~~l~~~~~ 124 (299)
+|.+++.+++|+.+..|||++++ ...+|+|||||||+.++.++++.+.+.+.+... ...++...|+++|.
T Consensus 4 ~~~~~~~s~~G~~r~~nED~~~~--------~~~~~~V~DG~Gg~~~~~~as~~~~~~l~~~~~~~~~~~~~~~l~~a~~ 75 (237)
T 1txo_A 4 VLRYAARSDRGLVRANNEDSVYA--------GARLLALADGMGGHAAGEVASQLVIAALAHLDDDEPGGDLLAKLDAAVR 75 (237)
T ss_dssp EEEEEEEEECCSSCSSCCEEEEE--------CSSEEEEEEEECTTTHHHHHHHHHHHHHGGGGSSCCCSCHHHHHHHHHH
T ss_pred EEEEEEecCCCCCCCcCCCcccc--------CCCEEEEEeCCCCcHHHHHHHHHHHHHHHHHhhhCCchhHHHHHHHHHH
Confidence 38899999999844489999974 236999999999999999999988888765432 22367889999999
Q ss_pred HHHHHHHhhcccc--CCCCcceEEEEEEeCCeEEEEEccCceeEEEecCcccccccCCCChhHHHHHHHcCCeeecCCCC
Q 022320 125 STDQFILENSMQL--GPGGSTAVTAIVIDGKDLWVANVGDSRAVVCERGSANQITVDHEPHAERRRIEKQGGFVTSLPGD 202 (299)
Q Consensus 125 ~~~~~l~~~~~~~--~~~~~tt~~~~~i~~~~l~~a~vGDsr~~l~r~~~~~~lt~dh~~~~e~~rl~~~gg~~~~~~~~ 202 (299)
.+++.+.+..... ...+|||++++++.+++++++|+||||+|++|++++.+||.||++.++ +.+.|.+.......
T Consensus 76 ~~~~~i~~~~~~~~~~~~~gtT~~~~~i~~~~l~~a~vGDsr~~l~r~g~~~~lt~dh~~~~~---~~~~G~i~~~~~~~ 152 (237)
T 1txo_A 76 AGNSAIAAQVEMEPDLEGMGTTLTAILFAGNRLGLVHIGDSRGYLLRDGELTQITKDDTFVQT---LVDEGRITPEEAHS 152 (237)
T ss_dssp HHHHHHHHHHHHCGGGTTCEECEEEEEEETTEEEEEEESSCEEEEEETTEEEECSCCCBHHHH---HHHTTSSCTTGGGG
T ss_pred HHHHHHHHHHhhCCCCCCCcceEEEEEEECCEEEEEEEccCcEEEEeCCEeEEeCCCCCHHHH---HHHcCCCCHHHHhh
Confidence 9999998765432 245789999999999999999999999999999999999999998765 56677655544333
Q ss_pred cCccCCcccccccccCcCccCccccCCceEEEEeCCCCeEEEEecCCCCCCCCCHHHHHHhhcCCCCHHHHHHHHHHHHH
Q 022320 203 VPRVNGQLAVARAFGDQSLKAHLSSEPDVRHVPIDPSIEFLILASDGLWKQVMKNQEAVDLVKPIKDPQAAAKRLTTEAL 282 (299)
Q Consensus 203 ~~~~~~~~~ltr~lG~~~~~~~v~~~p~~~~~~l~~g~d~llL~SDGv~d~~l~~~~i~~i~~~~~~~~~~a~~L~~~a~ 282 (299)
++ .+..+||++|+. ...|++..+++.++ |+|||||||||| +++++++.+++.. .+|+++|+.|++.|+
T Consensus 153 ~~---~~~~~tr~lg~~------~~~p~~~~~~l~~~-d~lvl~SDGl~d-~l~~~~i~~~~~~-~~~~~~a~~L~~~a~ 220 (237)
T 1txo_A 153 HP---QRSLIMRALTGH------EVEPTLTMREARAG-DRYLLCSDGLSD-PVSDETILEALQI-PEVAESAHRLIELAL 220 (237)
T ss_dssp CT---TTTCBCCCBSSS------CCCCEEEEEECCTT-CEEEEECHHHHT-TSCHHHHHHHHTS-SSHHHHHHHHHHHHH
T ss_pred Cc---cccceeeccCCC------CccceEEEEecCCC-CEEEEECCCCCC-CCCHHHHHHHHhc-CCHHHHHHHHHHHHH
Confidence 33 344899999964 46899999999998 888999999999 9999999999976 689999999999999
Q ss_pred hCCCCCCcEEEEEEeCC
Q 022320 283 ARKSKDDISCIVIRFGQ 299 (299)
Q Consensus 283 ~~~~~DNiTvivv~~~~ 299 (299)
.+++.||+|+||++|..
T Consensus 221 ~~g~~DniTvivv~~~~ 237 (237)
T 1txo_A 221 RGGGPDNVTVVVADLEH 237 (237)
T ss_dssp HTTCCSCEEEEEEEEEC
T ss_pred HcCCCCCeEEEEEEeeC
Confidence 99999999999999863
No 15
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A
Probab=100.00 E-value=1.5e-42 Score=297.73 Aligned_cols=231 Identities=22% Similarity=0.298 Sum_probs=178.6
Q ss_pred eeEEEEeeccCCCCCCCceEEEEeeccCCceeEEEEEEcCCCCChHHHHHHHHHHHHHHhcc-----CCCccHHHHHHHH
Q 022320 48 VSHGYHLVEGQSGHDMEDYLVAEYRKKKNHVLGLFAIFDGHLGDRVPTYLKDNLFNNILEES-----NFWKDPKAAITNA 122 (299)
Q Consensus 48 ~~~~~~s~~G~r~~~neD~~~~~~~~~~~~~~~l~~V~DG~GG~~~a~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~ 122 (299)
|+|++.+++|+.+..|||++ +... .... +|+|||||||+.++.++++.+...+.+.. .....+...|.++
T Consensus 1 ~~~~~~s~~G~~r~~neD~~-~~~~---~~~~-~~~V~DG~Gg~~~~~~as~~~~~~l~~~~~~~~~~~~~~~~~~l~~~ 75 (240)
T 2j82_A 1 MDVAGLTDCGLIRKSNQDAF-YIDE---KHQR-FFIVADGMGGHAGGEEASRLAVDHIRQYLETHLEDLQHDPVTLLRQA 75 (240)
T ss_dssp CEEEEEEECCSSCSSCCEEE-EECT---TTCC-EEEEEEBC---CHHHHHHHHHHHHHHHHHHHHHHHHTTSHHHHHHHH
T ss_pred CeEEEeCCCCCCCCcCCCcc-EecC---CCCe-EEEEEcCCCCchHHHHHHHHHHHHHHHHHHhcccccchhHHHHHHHH
Confidence 57999999999444999999 5322 1334 99999999999777776666555543311 1034678889999
Q ss_pred HHHHHHHHHhhcccc--CCCCcceEEEEEEe--CCeEEEEEccCceeEEEecCcccccccCCCChhHHHHHHHcCCeeec
Q 022320 123 YRSTDQFILENSMQL--GPGGSTAVTAIVID--GKDLWVANVGDSRAVVCERGSANQITVDHEPHAERRRIEKQGGFVTS 198 (299)
Q Consensus 123 ~~~~~~~l~~~~~~~--~~~~~tt~~~~~i~--~~~l~~a~vGDsr~~l~r~~~~~~lt~dh~~~~e~~rl~~~gg~~~~ 198 (299)
|.++|+.+....... ...++||++++++. +++++++|+||||+|++|++++.+||.||++.++ +.+.|++...
T Consensus 76 ~~~~~~~l~~~~~~~~~~~~~gtT~~~~~i~~~~~~l~~anvGDsr~~l~r~~~~~~lt~dh~~~~~---~~~~g~i~~~ 152 (240)
T 2j82_A 76 FLAANHAIVEQQRQNSARADMGTTAVVILLDEKGDRAWCAHVGDSRIYRWRKDQLQQITSDHTWIAQ---AVQLGSLTIE 152 (240)
T ss_dssp HHHHHHHHHHHHTTSCSCTTCCBCEEEEEECTTSSEEEEEEESSCEEEEEETTEEEECSCCCBHHHH---C---------
T ss_pred HHHHHHHHHHHhhcccCCCCCCceEEEEEEEecCCEEEEEEEccCceEEEeCCEEEEECCCCcHHHH---HHHcCCCCHH
Confidence 999999998876433 34578999999998 8999999999999999999999999999999875 5566766665
Q ss_pred CCCCcCccCCcccccccccCcCccCccccCCceEEEEeCCCCeEEEEecCCCCCCCCCHHHHHHhhcCCCCHHHHHHHHH
Q 022320 199 LPGDVPRVNGQLAVARAFGDQSLKAHLSSEPDVRHVPIDPSIEFLILASDGLWKQVMKNQEAVDLVKPIKDPQAAAKRLT 278 (299)
Q Consensus 199 ~~~~~~~~~~~~~ltr~lG~~~~~~~v~~~p~~~~~~l~~g~d~llL~SDGv~d~~l~~~~i~~i~~~~~~~~~~a~~L~ 278 (299)
....++ +++.+||+||+.. ...|++..+++.++ |+|||||||||| .++++++.+++. ..+++++++.|+
T Consensus 153 ~~~~~~---~~~~ltralG~~~-----~~~p~~~~~~l~~g-d~lll~SDGl~d-~l~~~~i~~~l~-~~~~~~~a~~l~ 221 (240)
T 2j82_A 153 QARQHP---WRHVLSQCLGRED-----LSQIDIQPIDLEPG-DRLLLCSDGLTE-ELTDDVISIYLS-EPNVQKAAAALV 221 (240)
T ss_dssp ----------CCCBSCCBSCTT-----CCCCEEEEEECCTT-CEEEEECHHHHT-TSCHHHHHHHHT-CSSHHHHHHHHH
T ss_pred HHhcCC---CcCeEeecCCCCC-----ceeEEEEEEeeCCC-CEEEEECCCCCC-CCCHHHHHHHHc-cCCHHHHHHHHH
Confidence 444333 4459999999976 67999999999998 889999999999 999999999998 789999999999
Q ss_pred HHHHhCCCCCCcEEEEEEe
Q 022320 279 TEALARKSKDDISCIVIRF 297 (299)
Q Consensus 279 ~~a~~~~~~DNiTvivv~~ 297 (299)
+.|+.+++.||+|+||+++
T Consensus 222 ~~a~~~g~~DniTvivv~~ 240 (240)
T 2j82_A 222 DAAKTHGGRDNVTVVVISV 240 (240)
T ss_dssp HHHHHTTCCSCEEEEEEEC
T ss_pred HHHHHcCCCCCeEEEEEeC
Confidence 9999999999999999985
No 16
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A
Probab=100.00 E-value=3.5e-43 Score=327.18 Aligned_cols=248 Identities=31% Similarity=0.410 Sum_probs=196.8
Q ss_pred eeEEEEeeccCCCCCCCceEEEEeeccCCceeEEEEEEcCCCCChHHHHHHHHHHHHHHhc---------c---------
Q 022320 48 VSHGYHLVEGQSGHDMEDYLVAEYRKKKNHVLGLFAIFDGHLGDRVPTYLKDNLFNNILEE---------S--------- 109 (299)
Q Consensus 48 ~~~~~~s~~G~r~~~neD~~~~~~~~~~~~~~~l~~V~DG~GG~~~a~~~~~~~~~~~~~~---------~--------- 109 (299)
...+|.+.+|..+..|||++.+..... ....||+|||||||+.+|+++++.++..+... .
T Consensus 37 ~v~~~~s~~g~~R~~nED~~~v~~~~~--~~~~lfgVfDGHGG~~aa~~as~~L~~~i~~~l~~~~~l~~~~~~~~~~~~ 114 (467)
T 2pnq_A 37 SILGFDSNRLPANAPIEDRRSATTCLQ--TRGMLLGVFDGHAGCACSQAVSERLFYYIAVSLLPHETLLEIENAVESGRA 114 (467)
T ss_dssp SEEEEEEEEECCSSSCCEEEEEEEESS--SSCEEEEEEEEESSSHHHHHHHHHHHHHHHHHHCCHHHHHHHHTTTC----
T ss_pred ceEEEEeeccCCCCCCCCceeeeeccC--CCcEEEEEECCCCCHHHHHHHHHHHHHHHHHhhcchhhhhhhhhhhhcccc
Confidence 456666778877779999997654321 34579999999999999999999988776531 0
Q ss_pred ------------C-----------------------------CCccHHHHHHHHHHHHHHHHHhhccc------------
Q 022320 110 ------------N-----------------------------FWKDPKAAITNAYRSTDQFILENSMQ------------ 136 (299)
Q Consensus 110 ------------~-----------------------------~~~~~~~~l~~~~~~~~~~l~~~~~~------------ 136 (299)
+ ....+...|+++|.++++.|......
T Consensus 115 ~~~~l~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~aL~~af~~~d~~i~~~~~~~~~~~~~~~~~~ 194 (467)
T 2pnq_A 115 LLPILQWHKHPNDYFSKEASKLYFNGLRTYWQELIDLNTGESADIDVKEALINAFKRLDNDISLEAQVGDPNSFLNYLVL 194 (467)
T ss_dssp CCCCEEECCCTTCCCCSTTHHHHHHHHHHHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHHHHCCSSHHHHHHHH
T ss_pred ccccccccccccccchhhhhhhhhcchhhhhhhhccccccccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccccccc
Confidence 0 01157889999999999999865431
Q ss_pred cCCCCcceEEEEEEeCCeEEEEEccCceeEEEec---C--cccccccCCCChh--HHHHHHHcCCeeecCC-CCcCccCC
Q 022320 137 LGPGGSTAVTAIVIDGKDLWVANVGDSRAVVCER---G--SANQITVDHEPHA--ERRRIEKQGGFVTSLP-GDVPRVNG 208 (299)
Q Consensus 137 ~~~~~~tt~~~~~i~~~~l~~a~vGDsr~~l~r~---~--~~~~lt~dh~~~~--e~~rl~~~gg~~~~~~-~~~~~~~~ 208 (299)
....+|||++++++.++++|+||+||||+|+++. | .+.+||.||++.+ |++||.+.|+...... ...++.+|
T Consensus 195 ~~~~~GtTa~v~li~~~~l~vAnvGDSRa~l~r~~~~g~~~~~~LT~DH~~~~~~E~~Ri~~~g~~~~~~~~~~~~Rv~G 274 (467)
T 2pnq_A 195 RVAFSGATACVAHVDGVDLHVANTGDSRAMLGVQEEDGSWSAVTLSNDHNAQNERELQRLKLEHPKNEAKSVVKQDRLLG 274 (467)
T ss_dssp HHHHSEECEEEEEEETTEEEEEEESSCEEEEEEECTTSCEEEEECCCCCSTTCHHHHHHHHHTSCGGGHHHHBSSSSBTT
T ss_pred cCCCCcceEEEEEEECCEEEEEECCCceEEEEEecCCCcEEEEECCCCCCCCCHHHHHHHHHcCCCcccceeEecCcccc
Confidence 1235789999999999999999999999999984 7 7999999999986 8999999987543211 12347788
Q ss_pred cccccccccCcCcc---------------------------------CccccCCceEEEEeCCCCeEEEEecCCCCCCCC
Q 022320 209 QLAVARAFGDQSLK---------------------------------AHLSSEPDVRHVPIDPSIEFLILASDGLWKQVM 255 (299)
Q Consensus 209 ~~~ltr~lG~~~~~---------------------------------~~v~~~p~~~~~~l~~g~d~llL~SDGv~d~~l 255 (299)
.+.+||+||+..+| |+++++|++..+++.++|.||||||||||| ++
T Consensus 275 ~l~vtRAlGd~~~K~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~v~~~Pdv~~~~l~~~D~fLVLaSDGLwd-~l 353 (467)
T 2pnq_A 275 LLMPFRAFGDVKFKWSIDLQKRVIESGPDQLNDNEYTKFIPPNYHTPPYLTAEPEVTYHRLRPQDKFLVLATDGLWE-TM 353 (467)
T ss_dssp TBSSSBCEECGGGTSCHHHHHHHHSSSCC-----------CTTCSSSCCCBCCCEEEEEECCTTEEEEEEECHHHHT-TS
T ss_pred ccccchhcCchhhcccchhhhhhhcccccccccccccccccccccCCCcccccceEEEEEcCCCCeEEEEEecCccc-cC
Confidence 88999999998765 337889999999999997799999999999 99
Q ss_pred CHHHHHHhhcCCC------CH------------------------------HHHHHHHHHHHHhCC--------------
Q 022320 256 KNQEAVDLVKPIK------DP------------------------------QAAAKRLTTEALARK-------------- 285 (299)
Q Consensus 256 ~~~~i~~i~~~~~------~~------------------------------~~~a~~L~~~a~~~~-------------- 285 (299)
+++++.+++.... +| +.+|..|++.|+..+
T Consensus 354 s~~eiv~iv~~~~~~~~~~~p~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~naA~~Lir~Al~~~~~Ge~~~~~~~~ll 433 (467)
T 2pnq_A 354 HRQDVVRIVGEYLTGMHHQQPIAVGGYKVTLGQMHGLLTERRAKMSSVFEDQNAATHLIRHAVGNNEFGAVDHERLSKML 433 (467)
T ss_dssp CHHHHHHHHHHHHTTCSSCC-------------------------------CCHHHHHHHHHHC----------------
T ss_pred ChHHHHHHHHHHHhhccccCcccccccCccHHHHHHHHHHhhhcccCCchhhHHHHHHHHHHhcCCCcCcchHHHHHhhh
Confidence 9999999986521 23 567899999999764
Q ss_pred ---------CCCCcEEEEEEeC
Q 022320 286 ---------SKDDISCIVIRFG 298 (299)
Q Consensus 286 ---------~~DNiTvivv~~~ 298 (299)
.+||||||||+|+
T Consensus 434 ~~~~~~~R~~~DdITViVv~~~ 455 (467)
T 2pnq_A 434 SLPEELARMYRDDITIIVVQFN 455 (467)
T ss_dssp ---------CCSCEEEEEEEEC
T ss_pred cCCccccccCCCCcEEEEEEeC
Confidence 4899999999985
No 17
>2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A
Probab=100.00 E-value=5.3e-42 Score=293.35 Aligned_cols=225 Identities=24% Similarity=0.280 Sum_probs=188.9
Q ss_pred ceeEEEEeeccCCCCCCCceEEEEeeccCCceeEEEEEEcCCCCC--hHHHHHHHHHHHHHHhccCCCccHHHHHHHHHH
Q 022320 47 KVSHGYHLVEGQSGHDMEDYLVAEYRKKKNHVLGLFAIFDGHLGD--RVPTYLKDNLFNNILEESNFWKDPKAAITNAYR 124 (299)
Q Consensus 47 ~~~~~~~s~~G~r~~~neD~~~~~~~~~~~~~~~l~~V~DG~GG~--~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 124 (299)
.+++++.+++|+.+..|||++++ +..+|+|||||||+ .+|.++...+...+.... + ...+.++|.
T Consensus 5 ~~~~~~~s~~G~~r~~neD~~~~--------~~~~~~V~DG~Gg~G~~as~~~~~~l~~~~~~~~----~-~~~l~~~~~ 71 (234)
T 2jfr_A 5 VLSAATATDQGPVRENNQDACLA--------DGILYAVADGFGARGHHASATALKTLSAGFAAAP----D-RDGLLEAVQ 71 (234)
T ss_dssp EEEEEEEEECCSSCSSCCEEEEE--------ETTEEEEEEEESTTHHHHHHHHHHHHHHHHHHSC----S-HHHHHHHHH
T ss_pred eEEEEEecCCCCCCCcCCCccee--------CCcEEEEEeCCCccHHHHHHHHHHHHHHHHhcCC----c-HHHHHHHHH
Confidence 48999999999944499999964 33699999999987 677777776666554331 2 778999999
Q ss_pred HHHHHHHhhccccCCCCcceEEEEEEeCCe---EEEEEccCceeEEEecCcccccccCCCChhHHHHHHHcCCeeecCCC
Q 022320 125 STDQFILENSMQLGPGGSTAVTAIVIDGKD---LWVANVGDSRAVVCERGSANQITVDHEPHAERRRIEKQGGFVTSLPG 201 (299)
Q Consensus 125 ~~~~~l~~~~~~~~~~~~tt~~~~~i~~~~---l~~a~vGDsr~~l~r~~~~~~lt~dh~~~~e~~rl~~~gg~~~~~~~ 201 (299)
.+|+.+..........++||++++++.+++ ++++|+||||+|++|++++.+||.||++.++ +.+.|.+......
T Consensus 72 ~~~~~l~~~~~~~~~~~gtT~~~~~i~~~~~~~l~~anvGDsr~~l~r~g~~~~lt~dh~~~~~---~~~~g~i~~~~~~ 148 (234)
T 2jfr_A 72 QANLRVFELLGDEPTVSGTTLTAVAVFEPGQGGPLVVNIGDSPLYRIRDGHMEQLTDDHSVAGE---LVRMGEITRHEAR 148 (234)
T ss_dssp HHHHHHHHHHTTSSSCCEECEEEEECCCGGGTSCEEEEESSCCEEEEETTEEEECSCCCBHHHH---HHHTTSSCHHHHT
T ss_pred HHHHHHHHhhccCCCCCCccEEEEEEECCCccEEEEEEEccCceEEEECCEEEEeCCCCCHHHH---HHHcCCCCHHHHh
Confidence 999999887654322288999999998888 9999999999999999999999999998875 5667766654433
Q ss_pred CcCccCCcccccccccCcCccCccccCCceEEEEeCCCCeEEEEecCCCCCCCCCHHHHHHhhcCCCCHHHHHHHHHHHH
Q 022320 202 DVPRVNGQLAVARAFGDQSLKAHLSSEPDVRHVPIDPSIEFLILASDGLWKQVMKNQEAVDLVKPIKDPQAAAKRLTTEA 281 (299)
Q Consensus 202 ~~~~~~~~~~ltr~lG~~~~~~~v~~~p~~~~~~l~~g~d~llL~SDGv~d~~l~~~~i~~i~~~~~~~~~~a~~L~~~a 281 (299)
.++ +++.+||+||+.. ...|++..+++.++ |+|||||||||| .++++++.+++ ...+++++|+.|++.|
T Consensus 149 ~~~---~~~~~tralG~~~-----~~~~~~~~~~l~~g-d~lll~SDGl~d-~~~~~~i~~~~-~~~~~~~~a~~l~~~a 217 (234)
T 2jfr_A 149 WHP---QRHLLTRALGIGP-----HIGPDVFGIDCGPG-DRLLISSDGLFA-AADEALIVDAA-TSPDPQVAVRRLVEVA 217 (234)
T ss_dssp TCT---TTTCBSCCBSSSS-----CCCCEEEECCCCTT-CEEEEECGGGGT-TSCHHHHHHHH-TCSSHHHHHHHHHHHH
T ss_pred cCc---ccceeeecCcCCC-----CceeEEEEEecCCC-CEEEEECCCCcc-ccCHHHHHHHH-ccCCHHHHHHHHHHHH
Confidence 333 4458999999976 67999999999998 899999999999 99999999999 7789999999999999
Q ss_pred HhCCCCCCcEEEEEEeC
Q 022320 282 LARKSKDDISCIVIRFG 298 (299)
Q Consensus 282 ~~~~~~DNiTvivv~~~ 298 (299)
+.+++.||+|+|||++.
T Consensus 218 ~~~g~~DniTvivv~~g 234 (234)
T 2jfr_A 218 NDAGGSDNTTVVVIDLG 234 (234)
T ss_dssp HHTTCCSCEEEEEEEEC
T ss_pred HHcCCCCCeEEEEEEeC
Confidence 99999999999999974
No 18
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans}
Probab=100.00 E-value=2.1e-38 Score=266.88 Aligned_cols=196 Identities=15% Similarity=0.161 Sum_probs=155.4
Q ss_pred ceeEEEEEEcCCCCChHHHHHHHHHHHHHHhccCCCccHHHHHHHHHHHHHHHHHhhcccc--CCCCcceEEEEEEe--C
Q 022320 77 HVLGLFAIFDGHLGDRVPTYLKDNLFNNILEESNFWKDPKAAITNAYRSTDQFILENSMQL--GPGGSTAVTAIVID--G 152 (299)
Q Consensus 77 ~~~~l~~V~DG~GG~~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~--~~~~~tt~~~~~i~--~ 152 (299)
++..+|+|||||||+.+++.+++.+.+.+.+....... +.+++..+|+.+....... ...+|||++++++. +
T Consensus 8 ~~~~l~~VaDG~GG~~~g~~AS~~~~~~l~~~~~~~~~----~~~~~~~an~~l~~~~~~~~~~~~~GtT~~~~~i~~~~ 83 (211)
T 3rnr_A 8 GDKAYCVVVDGMGGMIRGDEAAQRALSASVGVLDAGGS----PLDAVLAAQAAVHRWASQGGILGRTGATMAVAAVNLRD 83 (211)
T ss_dssp TTEEEEEEEEECTTSTTHHHHHHHHHHHHHHHHHTTCC----HHHHHHHHHHHHHHHHHHTTCTTSCCEEEEEEEEETTT
T ss_pred CCccEEEEEeCCcCcHHHHHHHHHHHHHHHHHHhccCC----HHHHHHHHHHHHHHHHhhccCCCCcchhheeeeeeeCC
Confidence 56689999999999987777777766666543222222 3578888888887765432 34689999999999 8
Q ss_pred CeEEEEEccCceeEEEecCcccccccCCCChhHHHHHHHcCCeeecCCCCcCccCCcccccccccCcCccCccccCCce-
Q 022320 153 KDLWVANVGDSRAVVCERGSANQITVDHEPHAERRRIEKQGGFVTSLPGDVPRVNGQLAVARAFGDQSLKAHLSSEPDV- 231 (299)
Q Consensus 153 ~~l~~a~vGDsr~~l~r~~~~~~lt~dh~~~~e~~rl~~~gg~~~~~~~~~~~~~~~~~ltr~lG~~~~~~~v~~~p~~- 231 (299)
++++++|+||||+|++|++++.+||+||++.++ +.+.|. .. ..++. +..+||+||... ...|++
T Consensus 84 ~~~~~anvGDSr~yl~r~g~~~~lt~dh~~~~~---~~~~g~-~~---~~~~~---~~~ltralG~~~-----~~~~~~~ 148 (211)
T 3rnr_A 84 GTLEWASVGDCRVYLFKGGRLSRLSLDHNVSSE---MVLLGR-GP---VPGPA---GEMITSFIGIEN-----LTEISTS 148 (211)
T ss_dssp TEEEEEEESSCEEEEEETTEEEECCCCCBHHHH---HHHTTS-CC---CCSHH---HHCBSCCBTCSS-----CCCCEEC
T ss_pred CEEEEEEEccCeEEEEeCCEEEEECCCcHHHHH---HHHcCC-Ch---hhCCC---ccEEecccCCCC-----CcceeEe
Confidence 999999999999999999999999999999876 566665 32 33333 348999999877 678898
Q ss_pred -EEEEeCCCCeEEEEecCCCCCCCCCHHHHHHhhcCCCCHHHHHHHHHHHHHhCC--CCCCcEEEEEEe
Q 022320 232 -RHVPIDPSIEFLILASDGLWKQVMKNQEAVDLVKPIKDPQAAAKRLTTEALARK--SKDDISCIVIRF 297 (299)
Q Consensus 232 -~~~~l~~g~d~llL~SDGv~d~~l~~~~i~~i~~~~~~~~~~a~~L~~~a~~~~--~~DNiTvivv~~ 297 (299)
..+++.++ |+|||||||||+ +++++++.+++....+ |+.|++.|++++ +.||+|+|||+|
T Consensus 149 ~~~~~l~~g-d~llL~SDGl~d-~~~~~~i~~~l~~~~~----a~~L~~~a~~~g~~~~DNiTvivv~L 211 (211)
T 3rnr_A 149 EAPLPLEAG-EGVLVVSDGVYR-SLHEDRIAMALSRGSD----ARGILQEVEAQGRPYQDNATLALVIL 211 (211)
T ss_dssp SSCEECCTT-CEEEEEEC------CCTTEEEEEECTTSC----HHHHHHHHHHSCTTSCSSCEEEEEEC
T ss_pred cceecCCCC-CEEEEEcCCCCC-CcCHHHHHHHHhcCCh----HHHHHHHHHHcCCCCCCceEEEEEeC
Confidence 88999998 889999999999 9999999999977544 999999999999 999999999986
No 19
>3t91_A Stage II sporulation protein E; SPOIIE, phosphatase, manganese binding, PP2C PH domain; HET: GL0 MAN; 2.64A {Bacillus subtilis} PDB: 3t9q_A*
Probab=99.90 E-value=5.3e-23 Score=176.26 Aligned_cols=201 Identities=19% Similarity=0.214 Sum_probs=138.6
Q ss_pred CCceeEEEEeeccCCCCCCCceEEEEeeccCCceeEEEEEEcCCCCChHHHHH---HHHHHHHHHhccCCCccHHHHHHH
Q 022320 45 SNKVSHGYHLVEGQSGHDMEDYLVAEYRKKKNHVLGLFAIFDGHLGDRVPTYL---KDNLFNNILEESNFWKDPKAAITN 121 (299)
Q Consensus 45 ~~~~~~~~~s~~G~r~~~neD~~~~~~~~~~~~~~~l~~V~DG~GG~~~a~~~---~~~~~~~~~~~~~~~~~~~~~l~~ 121 (299)
+-.+.+++++..-.....+.|+|.+... .++..+++|+||+|++..|..+ +..++..+.... .. +..
T Consensus 5 ~~~i~~~~~~~~~p~~~v~GD~y~~~~~---~~~~~~~~vaDg~G~G~~aa~~s~~~~~~l~~~~~~~---~~----~~~ 74 (242)
T 3t91_A 5 SYRVSTGAAHAAKGGGLVSGDSYSMMEL---GARKYAAAISDGMGNGARAHFESNETIKLLEKILESG---ID----EKI 74 (242)
T ss_dssp CCEEEEEEEEECTTSCSCCSCEEEEEEE---TTTEEEEEEECC-----CCSEEECHHHHHHHHHHHHT---CC----HHH
T ss_pred eEEEEEEeehhcCCccccCCcEEEEEEe---CCCeEEEEEEeeCCCCHHHHHHHHHHHHHHHHHHHhC---CC----HHH
Confidence 3458899999877776689999975432 2345789999999976433322 222333333221 12 445
Q ss_pred HHHHHHHHHHhhccccCCCCcceEEEEEEe--CCeEEEEEccCceeEEEecCcccccccCCCChhHHHHHHHcCCeeecC
Q 022320 122 AYRSTDQFILENSMQLGPGGSTAVTAIVID--GKDLWVANVGDSRAVVCERGSANQITVDHEPHAERRRIEKQGGFVTSL 199 (299)
Q Consensus 122 ~~~~~~~~l~~~~~~~~~~~~tt~~~~~i~--~~~l~~a~vGDsr~~l~r~~~~~~lt~dh~~~~e~~rl~~~gg~~~~~ 199 (299)
++..+|+.+..... ..+.+|+++++++ +++++++|+||+|+|++|++++.+++.++.
T Consensus 75 ~l~~~n~~l~~~~~---~~~~~T~~~~~id~~~~~l~~~~aG~~~~~l~r~g~~~~l~~~~~------------------ 133 (242)
T 3t91_A 75 AIKTINSILSLRTT---DEIYSTLDLSIIDLQDASCKFLKVGSTPSFIKRGDQVMKVQASNL------------------ 133 (242)
T ss_dssp HHHHHHHHHTTC-------CCCCEEEEEEETTTCEEEEEEESCCCEEEEETTEEEECCCC--------------------
T ss_pred HHHHHHHHHHhcCC---CCeEeEEEEEEEECCCCEEEEEcCCCCceEEEECCEEEEecCCCc------------------
Confidence 66777877765432 3466777777775 689999999999999999998887765432
Q ss_pred CCCcCccCCcccccccccCcCccCccccCCceEEEEeCCCCeEEEEecCCCCCCCCC-----HHHHHHhhcC--CCCHHH
Q 022320 200 PGDVPRVNGQLAVARAFGDQSLKAHLSSEPDVRHVPIDPSIEFLILASDGLWKQVMK-----NQEAVDLVKP--IKDPQA 272 (299)
Q Consensus 200 ~~~~~~~~~~~~ltr~lG~~~~~~~v~~~p~~~~~~l~~g~d~llL~SDGv~d~~l~-----~~~i~~i~~~--~~~~~~ 272 (299)
.+|... ...++...+++.+| |.|||||||||+ .++ +..+.+++.. ..++++
T Consensus 134 ---------------~lG~~~-----~~~~~~~~~~l~~G-D~lll~SDGl~e-~~~~~~~~~~~~~~ll~~~~~~~~~~ 191 (242)
T 3t91_A 134 ---------------PIGIIN-----EFDVEVVSEQLKAG-DLLIMMSDGIFE-GPKHVENHDLWMKRKMKGLKTNDPQE 191 (242)
T ss_dssp ------------------CCC-----TTCEEEEEEECCTT-CEEEEECHHHHT-CSTTCSCHHHHHHHHHHTCCCCCHHH
T ss_pred ---------------eeEecC-----CCcceEEEEEeCCC-CEEEEECCCccc-CCCcccchHHHHHHHHHHhcCCCHHH
Confidence 234322 34667888999998 999999999999 887 6677777763 478999
Q ss_pred HHHHHHHHHHhCC-C--CCCcEEEEEEeC
Q 022320 273 AAKRLTTEALARK-S--KDDISCIVIRFG 298 (299)
Q Consensus 273 ~a~~L~~~a~~~~-~--~DNiTvivv~~~ 298 (299)
+++.|++.+...+ . .||+|+|++++.
T Consensus 192 ~~~~l~~~~~~~~~~~~~DDiTvv~i~~~ 220 (242)
T 3t91_A 192 IADLLMEEVIRTRSGQIEDDMTVVVVRID 220 (242)
T ss_dssp HHHHHHHHHHHHTTSCCCSCEEEEEEEEE
T ss_pred HHHHHHHHHHHHcCCCCCCceEEEEEEEe
Confidence 9999999998865 3 699999999974
No 20
>3pu9_A Protein serine/threonine phosphatase; PSI-biology, MCSG, structural genomics; HET: MSE; 1.55A {Sphaerobacter thermophilus}
Probab=99.89 E-value=1.5e-21 Score=167.20 Aligned_cols=202 Identities=19% Similarity=0.160 Sum_probs=148.5
Q ss_pred ceeEEEEeeccCCCCCCCceEEEEeeccCCceeEEEEEEcCCCCChHHHHHHHHHHHHHHhccCCCccHHHHHHHHHHHH
Q 022320 47 KVSHGYHLVEGQSGHDMEDYLVAEYRKKKNHVLGLFAIFDGHLGDRVPTYLKDNLFNNILEESNFWKDPKAAITNAYRST 126 (299)
Q Consensus 47 ~~~~~~~s~~G~r~~~neD~~~~~~~~~~~~~~~l~~V~DG~GG~~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 126 (299)
.+.+++.+........+.|+|.+... ..+..+++|+||+|++..|..++..+...+......... +..++..+
T Consensus 10 ~~~~~~~~~~~~~~~vgGD~y~~~~~---~~~~~~~~vaD~~G~G~~aa~~s~~~~~~l~~~~~~~~~----~~~~l~~~ 82 (242)
T 3pu9_A 10 TIELAVAKTHKFGTRESGDTVELVER---PGGGFSAVLVDGQGSGAGAKRLSLLVAGAAVRLLNEGVR----DGAAARAA 82 (242)
T ss_dssp EEEEEEEEECCTTCSSCSEEEEEEEC---TTSEEEEEEEEESSSHHHHHHHHHHHHHHHHHHHHTTCC----HHHHHHHH
T ss_pred EEEEEEEecccCccccCCceEEEEEe---CCCEEEEEEEecCCCCHHHHHHHHHHHHHHHHHHHcCCC----HHHHHHHH
Confidence 37788888777766689999875422 234567999999999877777666443333221111112 34677778
Q ss_pred HHHHHhhccccCCCCcceEEEEEEe--CCeEEEEEccCceeEEEecCcccccccCCCChhHHHHHHHcCCeeecCCCCcC
Q 022320 127 DQFILENSMQLGPGGSTAVTAIVID--GKDLWVANVGDSRAVVCERGSANQITVDHEPHAERRRIEKQGGFVTSLPGDVP 204 (299)
Q Consensus 127 ~~~l~~~~~~~~~~~~tt~~~~~i~--~~~l~~a~vGDsr~~l~r~~~~~~lt~dh~~~~e~~rl~~~gg~~~~~~~~~~ 204 (299)
|+.+..... ..+.+|+++++++ .+.++++|+||+++|+++++++.+++.++.
T Consensus 83 n~~l~~~~~---~~~~~T~~~~~id~~~~~l~~~~aG~~~~~l~r~g~~~~l~~~~~----------------------- 136 (242)
T 3pu9_A 83 HDFLYAMRD---GKVSAALDILSVDLASRSVLVTRNSEVPMLLGRNGEFEQISESGG----------------------- 136 (242)
T ss_dssp HHHHHHHTT---TCCCEEEEEEEEETTTTEEEEEEESCCCEEEEETTEEEEECCCCC-----------------------
T ss_pred HHHHHhccC---CCcEEEEEEEEEECCCCEEEEEeCCCCcEEEEECCEEEEeCCCCc-----------------------
Confidence 888865542 3456788877775 579999999999999999999998887753
Q ss_pred ccCCcccccccccCcCccCccccCCceEEEEeCCCCeEEEEecCCCCCCCC-------CHHHHHHhhc-CCCCHHHHHHH
Q 022320 205 RVNGQLAVARAFGDQSLKAHLSSEPDVRHVPIDPSIEFLILASDGLWKQVM-------KNQEAVDLVK-PIKDPQAAAKR 276 (299)
Q Consensus 205 ~~~~~~~ltr~lG~~~~~~~v~~~p~~~~~~l~~g~d~llL~SDGv~d~~l-------~~~~i~~i~~-~~~~~~~~a~~ 276 (299)
.+|... ...++...+++.+| |.|+||||||++ .. ..+++..++. ...+++++++.
T Consensus 137 ----------~lG~~~-----~~~~~~~~~~l~~G-d~lll~TDGl~e-~~~~~~~~~g~~~l~~l~~~~~~~~~~~~~~ 199 (242)
T 3pu9_A 137 ----------RIGIYR-----HTRPRVLEFPAEPG-LTVILVSDGIIG-AGGRRGQPLEFLATGGRVAGPETPAQAIADE 199 (242)
T ss_dssp ----------CBSSCT-----TCCCEEEEEECCTT-CEEEEECHHHHT-TTTTTTCCCCHHHHHHHHCCTTCCHHHHHHH
T ss_pred ----------cccccC-----CCCceEEEEEeCCC-CEEEEECcCccc-CCCCccccccHHHHHHHHhccCCCHHHHHHH
Confidence 234333 34677888999998 999999999997 54 4577876665 34689999999
Q ss_pred HHHHHHhCC---CCCCcEEEEEEeC
Q 022320 277 LTTEALARK---SKDDISCIVIRFG 298 (299)
Q Consensus 277 L~~~a~~~~---~~DNiTvivv~~~ 298 (299)
|++.+...+ ..||+|++++++.
T Consensus 200 l~~~~~~~~~~~~~DDiTvlvv~~~ 224 (242)
T 3pu9_A 200 LLEAALVADDGRAGDDMTVVVLRLR 224 (242)
T ss_dssp HHHHHHHHTTTSCSSCEEEEEEEEE
T ss_pred HHHHHHHhcCCCCCCCeEEEEEEEe
Confidence 999998765 5799999999974
No 21
>3zt9_A Serine phosphatase; hydrolase, signal transduction, protein protein interaction,; HET: PEG; 1.75A {Moorella thermoacetica}
Probab=99.84 E-value=7.6e-19 Score=145.24 Aligned_cols=189 Identities=11% Similarity=0.062 Sum_probs=137.8
Q ss_pred ceeEEEEeeccCCCCCCCceEEEEeeccCCceeEEEEEEcCCCCChHHHHHHHHHHHHHHhccCCCccHHHHHHHHHHHH
Q 022320 47 KVSHGYHLVEGQSGHDMEDYLVAEYRKKKNHVLGLFAIFDGHLGDRVPTYLKDNLFNNILEESNFWKDPKAAITNAYRST 126 (299)
Q Consensus 47 ~~~~~~~s~~G~r~~~neD~~~~~~~~~~~~~~~l~~V~DG~GG~~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 126 (299)
.+++|..+........+.|.|.+... ++..+++|+||+|.+..|..++..+...+.+.. ...+ ...+..+
T Consensus 3 ~~~~~~~~~p~~~~~v~GD~y~~~~~----~~~~~~~v~Dv~GhG~~Aa~~s~~~~~~l~~~~--~~~p----~~il~~l 72 (193)
T 3zt9_A 3 KLEVGIYTRAREGEIACGDACLVKRV----EGVIFLAVGDGIGHGPEAARAAEIAIASMESSM--NTGL----VNIFQLC 72 (193)
T ss_dssp CCCEEEEEECCTTCSSCSEEEEEEEE----TTEEEEEEEEESSSHHHHHHHHHHHHHHHHHHT--TSCH----HHHHHHH
T ss_pred ccEEEEEEeccCCCCCCCCeEEEEEe----CCEEEEEEEeCCCCCHHHHHHHHHHHHHHHHcc--cCCH----HHHHHHH
Confidence 47899999887776689999976432 345899999999988777777766666555432 2233 3455567
Q ss_pred HHHHHhhccccCCCCcceEEEEEEe--CCeEEEEEccCceeEEEecCcccccccCCCChhHHHHHHHcCCeeecCCCCcC
Q 022320 127 DQFILENSMQLGPGGSTAVTAIVID--GKDLWVANVGDSRAVVCERGSANQITVDHEPHAERRRIEKQGGFVTSLPGDVP 204 (299)
Q Consensus 127 ~~~l~~~~~~~~~~~~tt~~~~~i~--~~~l~~a~vGDsr~~l~r~~~~~~lt~dh~~~~e~~rl~~~gg~~~~~~~~~~ 204 (299)
|+.+... .++|++++.++ .+++.++|+|+++.|++|++++..+...+
T Consensus 73 n~~l~~~-------~~~t~~~~~id~~~~~l~~~~aGh~~~~l~~~~~~~~l~~~~------------------------ 121 (193)
T 3zt9_A 73 HRELRGT-------RGAVAALCRVDRRQGLWQAAIVGNIHVKILSAKGIITPLATP------------------------ 121 (193)
T ss_dssp HHHHTTS-------SCEEEEEEEEETTTTEEEEEEESSCEEEEEETTEEECCCCBC------------------------
T ss_pred HHHHhcc-------CceEEEEEEEECCCCEEEEEecCCceEEEEcCCcEEEecCCC------------------------
Confidence 7776431 23455555555 57999999999999999988655433211
Q ss_pred ccCCcccccccccCcCccCccccCCceEEEEeCCCCeEEEEecCCCCCCCCCHHHHHHhhcCCCCHHHHHHHHHHHHHhC
Q 022320 205 RVNGQLAVARAFGDQSLKAHLSSEPDVRHVPIDPSIEFLILASDGLWKQVMKNQEAVDLVKPIKDPQAAAKRLTTEALAR 284 (299)
Q Consensus 205 ~~~~~~~ltr~lG~~~~~~~v~~~p~~~~~~l~~g~d~llL~SDGv~d~~l~~~~i~~i~~~~~~~~~~a~~L~~~a~~~ 284 (299)
..+|... ...++...+++.+| |.|+||||||++ .++.+++..++. .+|+++|+.|++.+ .
T Consensus 122 ---------g~lG~~~-----~~~~~~~~~~l~~g-d~l~l~sDGl~e-~~~~~~~~~~~~--~~~~~~a~~l~~~~--~ 181 (193)
T 3zt9_A 122 ---------GILGYNY-----PHQLLIAKGSYQEG-DLFLIHSDGIQE-GAVPLALLANYR--LTAEELVRLIGEKY--G 181 (193)
T ss_dssp ---------CBBTTBC-----CSSCCCEEEECCTT-CEEEEECTTSCT-TCSCGGGGGCTT--SCHHHHHHHHHHHH--C
T ss_pred ---------CceeccC-----CccceeEEeccCCC-CEEEEECCCCCC-ccChhhhhchhc--CCHHHHHHHHHHHh--C
Confidence 0234322 22566778999998 999999999999 999988887763 58999999999998 3
Q ss_pred CCCCCcEEEEEE
Q 022320 285 KSKDDISCIVIR 296 (299)
Q Consensus 285 ~~~DNiTvivv~ 296 (299)
+..||+|++|++
T Consensus 182 ~~~Dd~tvlv~r 193 (193)
T 3zt9_A 182 RRDDDVAVIVAR 193 (193)
T ss_dssp CTTSCEEEEEEC
T ss_pred cCCCCeEEEEEC
Confidence 478999999985
No 22
>3f79_A Probable two-component response regulator; adaptor, signaling protein; 2.80A {Pseudomonas aeruginosa} PDB: 3es2_A
Probab=99.81 E-value=2.1e-18 Score=148.68 Aligned_cols=202 Identities=17% Similarity=0.108 Sum_probs=130.1
Q ss_pred ceeEEEEeeccCCCCCCCceEEEEeeccCCceeEEEEEEcCCCCChHHHHHHHH---HHHHHHhccC-CCccHHHHHHHH
Q 022320 47 KVSHGYHLVEGQSGHDMEDYLVAEYRKKKNHVLGLFAIFDGHLGDRVPTYLKDN---LFNNILEESN-FWKDPKAAITNA 122 (299)
Q Consensus 47 ~~~~~~~s~~G~r~~~neD~~~~~~~~~~~~~~~l~~V~DG~GG~~~a~~~~~~---~~~~~~~~~~-~~~~~~~~l~~~ 122 (299)
.+.+++...... ...-|+|-+... +++..+++|+||+|++..|..++.. ++..+..... ........+..+
T Consensus 37 ~~~~~~~~~p~~--~vgGD~yd~~~~---~~~~~~~~vaD~~GhG~~aa~~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 111 (255)
T 3f79_A 37 GLEFSHRIIPSL--YLSGDFVDYFRV---DERRVAFYLADVSGHGASSAFVTVLLKFMTTRLLYESRRNGTLPEFKPSEV 111 (255)
T ss_dssp TEEEEEEEECSS--SSCSEEEEEEEE---TTTEEEEEEEEESSCSHHHHHHHHHHHHHHHHHHHHHTTCCC----CHHHH
T ss_pred CEEEEEEEeEhh--hcCceEEeEEEe---CCCEEEEEEEEecCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCHHHH
Confidence 377888777764 368998853322 2345789999999987666555443 3333332211 011122336677
Q ss_pred HHHHHHHHHhhccccCCCCcceEEEEEEe--CCeEEEEEccCc-eeEEEecCcccccccCCCChhHHHHHHHcCCeeecC
Q 022320 123 YRSTDQFILENSMQLGPGGSTAVTAIVID--GKDLWVANVGDS-RAVVCERGSANQITVDHEPHAERRRIEKQGGFVTSL 199 (299)
Q Consensus 123 ~~~~~~~l~~~~~~~~~~~~tt~~~~~i~--~~~l~~a~vGDs-r~~l~r~~~~~~lt~dh~~~~e~~rl~~~gg~~~~~ 199 (299)
+..+|+.+... ...+.+|+++++++ .+.++++|+|++ +.|++++|++.+++.+|.+
T Consensus 112 l~~ln~~l~~~----~~~~~~T~~~~~id~~~~~l~~~~aGh~p~~~l~~~g~~~~l~~~~~~----------------- 170 (255)
T 3f79_A 112 LAHINRGLINT----KLGKHVTMLGGVIDLEKNSLTYSIGGHLPLPVLFVEGQAGYLEGRGLP----------------- 170 (255)
T ss_dssp HHHHHHHHBTT----BSSCCEEEEEEEEETTTTEEEEEECSCSCCCEEEC--CEEECCC---------------------
T ss_pred HHHHHHHHHhc----CCCCEEEEEEEEEECCCCEEEEEeCCCCCceEEEeCCeEEEeCCCCce-----------------
Confidence 78888888653 24578888888885 679999999995 6899999988888766531
Q ss_pred CCCcCccCCcccccccccCcCccCccccCCceEEEEeCCCCeEEEEecCCCCCCCCCHHH-------HHHhhcC-CCCHH
Q 022320 200 PGDVPRVNGQLAVARAFGDQSLKAHLSSEPDVRHVPIDPSIEFLILASDGLWKQVMKNQE-------AVDLVKP-IKDPQ 271 (299)
Q Consensus 200 ~~~~~~~~~~~~ltr~lG~~~~~~~v~~~p~~~~~~l~~g~d~llL~SDGv~d~~l~~~~-------i~~i~~~-~~~~~ 271 (299)
||... ...++...+++.+| |.|+||||||++ .++.++ +.+++.. ..+++
T Consensus 171 ----------------lG~~~-----~~~~~~~~~~l~~g-d~lll~TDGl~e-~~~~~~~~~g~~~l~~~l~~~~~~~~ 227 (255)
T 3f79_A 171 ----------------VGLFD-----DATYDDRVMELPPS-FSLSLFSDGILD-VLPGATLKEKEASLPEQVAAAGGTLD 227 (255)
T ss_dssp -----------------CCSS-----CCCCCC---BCCSS-EEEEEECSCCCC-CSCC---CCTTTSSHHHHHHHSCSSH
T ss_pred ----------------EEEcC-----CCceEEEEEEECCC-CEEEEECCCcCc-ccCCCcchhhHHHHHHHHHhcCCCHH
Confidence 44333 34566778889998 999999999999 887766 7777754 34678
Q ss_pred HHHHHHHHHHHhCCCCCCcEEEEEEeC
Q 022320 272 AAAKRLTTEALARKSKDDISCIVIRFG 298 (299)
Q Consensus 272 ~~a~~L~~~a~~~~~~DNiTvivv~~~ 298 (299)
.+++.|. .+...+..||+|+++|+..
T Consensus 228 ~~~~~l~-~~~~~~~~DDiTvl~v~~~ 253 (255)
T 3f79_A 228 GLRQVFG-LANLAEMPDDIALLVLSRN 253 (255)
T ss_dssp HHHHHC------CCSSSCEEEEEEEEC
T ss_pred HHHHHHH-hccCCCCCCCEEEEEEEec
Confidence 8888887 5667788999999999864
No 23
>3ke6_A Protein RV1364C/MT1410; anti-sigma factor, anti-sigma factor antagonist, phosphatase serine kinase, ATPase, unknown function; 2.60A {Mycobacterium tuberculosis}
Probab=99.38 E-value=2.5e-10 Score=104.32 Aligned_cols=200 Identities=14% Similarity=0.115 Sum_probs=121.5
Q ss_pred CceeEEEEeeccCCC-CCCCceEEEEeeccCCceeEEEEEEcCCCCChHHHHHHHHHHHHHHhccCCCccHHHHHHHHHH
Q 022320 46 NKVSHGYHLVEGQSG-HDMEDYLVAEYRKKKNHVLGLFAIFDGHLGDRVPTYLKDNLFNNILEESNFWKDPKAAITNAYR 124 (299)
Q Consensus 46 ~~~~~~~~s~~G~r~-~~neD~~~~~~~~~~~~~~~l~~V~DG~GG~~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 124 (299)
..+++++........ ...-|.|.+... ++..+++|+|++|.+-.|..++..+...+........++. ..+.
T Consensus 34 ~~~~~~~~y~P~~~~~~vgGD~y~~~~~----~~~~~~~v~Dv~GhGv~AA~~~~~~~~~l~~~~~~~~~p~----~il~ 105 (399)
T 3ke6_A 34 PGADIAAEYLVAAEDTAAGGDWFDALAL----GDRLVLVVGDVVGHGVEAAAVMSQLRTALRMQISAGYTVV----EALE 105 (399)
T ss_dssp TTEEEEEEEECSSSSCSCCSEEEEEEEC----SSEEEEEEEECSSCSHHHHHHHHHHHHHHHHHHHTTCCHH----HHHH
T ss_pred CCeEEEEEEEECCCCCCCCCceEEEEEE----CCEEEEEEEEecCCCHHHHHHHHHHHHHHHHHHhcCCCHH----HHHH
Confidence 347788777766532 256798865432 2268999999999665555444433333322111112333 3445
Q ss_pred HHHHHHHhhccccCCCCcceEEEEEEe--CCeEEEEEccCceeEEEe-cCcccccccCCCChhHHHHHHHcCCeeecCCC
Q 022320 125 STDQFILENSMQLGPGGSTAVTAIVID--GKDLWVANVGDSRAVVCE-RGSANQITVDHEPHAERRRIEKQGGFVTSLPG 201 (299)
Q Consensus 125 ~~~~~l~~~~~~~~~~~~tt~~~~~i~--~~~l~~a~vGDsr~~l~r-~~~~~~lt~dh~~~~e~~rl~~~gg~~~~~~~ 201 (299)
.+|+ +.... .....+|++++.++ .+.+.++++|..+.|+++ +|++..+..++.
T Consensus 106 ~ln~-~~~~~---~~~~~~t~~~~~id~~~~~l~~~~aGh~~~~l~~~~g~~~~l~~~~~-------------------- 161 (399)
T 3ke6_A 106 AVDR-FHKQV---PGSKSATMCVGSLDFTSGEFQYCTAGHPPPLLVTADASARYVEPTGA-------------------- 161 (399)
T ss_dssp HHHH-HGGGS---TTCTTCEEEEEEEETTTCEEEEEEESSCCCEEECTTSCEEECCCCSC--------------------
T ss_pred HHHH-HHHhc---CCCcEEEEEEEEEECCCCEEEEECCCCChhEEEeCCCCEEEeecCCC--------------------
Confidence 5565 33222 23455666666664 578999999999999998 666665554321
Q ss_pred CcCccCCcccccccccCcCccCccccCCceEEEEeCCCCeEEEEecCCCCCCCCCH------HHHHHhhcCC--C-----
Q 022320 202 DVPRVNGQLAVARAFGDQSLKAHLSSEPDVRHVPIDPSIEFLILASDGLWKQVMKN------QEAVDLVKPI--K----- 268 (299)
Q Consensus 202 ~~~~~~~~~~ltr~lG~~~~~~~v~~~p~~~~~~l~~g~d~llL~SDGv~d~~l~~------~~i~~i~~~~--~----- 268 (299)
..+|.. ...+...+++.+| |.|+|+||||.+ ..+. +.+.+++... .
T Consensus 162 ------------~plG~~-------~~~~~~~~~l~~G-d~l~l~TDGl~e-~~~~~~~~g~~~l~~~l~~~~~~~~~~~ 220 (399)
T 3ke6_A 162 ------------GPLGSG-------TGFPVRSEVLNIG-DAILFYTDGLIE-RPGRPLEASTAEFADLAASIASGSGGFV 220 (399)
T ss_dssp ------------CCTTSS-------CCCCCEEEECCTT-CEEEEECTTTTS-CTTCCHHHHHHHHHHHHHHHTC------
T ss_pred ------------cceECC-------CCceeEEEEECCC-CEEEEECCCccc-CCCCCcchhHHHHHHHHHHhhccccccc
Confidence 023331 1344567899998 999999999999 7654 5566666431 1
Q ss_pred --CHHHHHHHHHHHHHh-----CCCCCCcEEEEEEeC
Q 022320 269 --DPQAAAKRLTTEALA-----RKSKDDISCIVIRFG 298 (299)
Q Consensus 269 --~~~~~a~~L~~~a~~-----~~~~DNiTvivv~~~ 298 (299)
++...++.|++.+++ .+..||+|++++++.
T Consensus 221 ~~~~~~~~~~l~~~~~~~~~~~~~~~DDitvl~vr~~ 257 (399)
T 3ke6_A 221 LDAPARPIDRLCSDTLELLLRSTGYNDDVTLLAMQRR 257 (399)
T ss_dssp ----CCHHHHHHHHHHHHHHHTTCCSSCEEEEEEEEC
T ss_pred ccChhhHHHHHHHHHHHHhccCCCCCCceEEEEEEee
Confidence 233344444444433 457899999999975
No 24
>3eq2_A Probable two-component response regulator; adaptor sigmas, signaling protein; 3.40A {Pseudomonas aeruginosa} PDB: 3f7a_A
Probab=98.90 E-value=2.7e-08 Score=90.55 Aligned_cols=196 Identities=17% Similarity=0.089 Sum_probs=106.1
Q ss_pred ceeEEEEeeccCCCCCCCceEEEEeeccCCceeEEEEEEcCCCCC-hHHH--HHHHHHHHHHHhccC-----CCccHHHH
Q 022320 47 KVSHGYHLVEGQSGHDMEDYLVAEYRKKKNHVLGLFAIFDGHLGD-RVPT--YLKDNLFNNILEESN-----FWKDPKAA 118 (299)
Q Consensus 47 ~~~~~~~s~~G~r~~~neD~~~~~~~~~~~~~~~l~~V~DG~GG~-~~a~--~~~~~~~~~~~~~~~-----~~~~~~~~ 118 (299)
.+.+++...... ...-|.|-+... +++..+++|+|+.|-+ .+|- .....++..+..... ...+
T Consensus 176 ~~~~~~~~~p~~--~vgGD~yd~~~~---~~~~~~~~i~Dv~GhGv~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 246 (394)
T 3eq2_A 176 GLEFSHRIIPSL--YLSGDFVDYFRV---DERRVAFYLADVSGHGASSAFVTVLLKFMTTRLLYESRRNGTLPEFK---- 246 (394)
T ss_dssp TEEEEEEEC-------CCCEEECCEE---TTTEEEEEEEEESSCSTTTHHHHHHHHHHHHHHHHHSCSSCSSSSCC----
T ss_pred CeEEEEEeccch--hcCccEEeEEEe---CCCcEEEEEEECCCCChHHHHHHHHHHHHHHHHHHhhhccCCcccCC----
Confidence 367777666553 257888853221 2445789999988844 3332 223334444433211 1113
Q ss_pred HHHHHHHHHHHHHhhccccCCCCcceEEEEEEe--CCeEEEEEccCce-eEEEecCcccccccCCCChhHHHHHHHcCCe
Q 022320 119 ITNAYRSTDQFILENSMQLGPGGSTAVTAIVID--GKDLWVANVGDSR-AVVCERGSANQITVDHEPHAERRRIEKQGGF 195 (299)
Q Consensus 119 l~~~~~~~~~~l~~~~~~~~~~~~tt~~~~~i~--~~~l~~a~vGDsr-~~l~r~~~~~~lt~dh~~~~e~~rl~~~gg~ 195 (299)
....+..+|+.+.... .....|++++.++ .+.+.++++|... .++.++|++..+.....
T Consensus 247 p~~~l~~ln~~l~~~~----~~~~~t~~~~~~d~~~~~l~~~~aGh~p~~~~~~~g~~~~l~~~~~-------------- 308 (394)
T 3eq2_A 247 PSEVLAHINRGLINTK----LGKHVTMLGGVIDLEKNSLTYSIGGHLPLPVLFVEGQAGYLEGRGL-------------- 308 (394)
T ss_dssp HHHHHHHHHHHHHHTT----CCCCEEEEEEEEETTTTEEEEEECSSSCCCEEEETTEEEECCCC----------------
T ss_pred HHHHHHHHHHHHhccC----cCcEEEEEEEEEECCCCEEEEEcCCCCCCcEEecCCceEecCCCCc--------------
Confidence 3445566777776431 2344556666665 5789999999865 66677777655542211
Q ss_pred eecCCCCcCccCCcccccccccCcCccCccccCCceEEEEeCCCCeEEEEecCCCCCCCCCH-------HHHHHhhcCCC
Q 022320 196 VTSLPGDVPRVNGQLAVARAFGDQSLKAHLSSEPDVRHVPIDPSIEFLILASDGLWKQVMKN-------QEAVDLVKPIK 268 (299)
Q Consensus 196 ~~~~~~~~~~~~~~~~ltr~lG~~~~~~~v~~~p~~~~~~l~~g~d~llL~SDGv~d~~l~~-------~~i~~i~~~~~ 268 (299)
.||... ........+++.+| |.|+|+|||+.| ..+. +.+.+++....
T Consensus 309 -------------------plG~~~-----~~~~~~~~~~l~~g-d~l~l~TDG~~e-~~~~~~~~~~~~~l~~~l~~~~ 362 (394)
T 3eq2_A 309 -------------------PVGLFD-----DATYDDRVMELPPS-FSLSLFSDGILD-VLPGATLKEKEASLPEQVAAAG 362 (394)
T ss_dssp -------------------CCSCCC-----CC--CCEEEECCSS-CEEEECSSCCCC------CCSTTTTTSHHHHHTTC
T ss_pred -------------------eeEecC-----CCceEEEEEEeCCC-CEEEEECCCccc-ccCcccchhhHHHHHHHHHhcc
Confidence 233322 23445667899998 999999999999 6433 34555554422
Q ss_pred CHHHHHHHHHHHHHh---CCCCCCcEEEEEEeC
Q 022320 269 DPQAAAKRLTTEALA---RKSKDDISCIVIRFG 298 (299)
Q Consensus 269 ~~~~~a~~L~~~a~~---~~~~DNiTvivv~~~ 298 (299)
.+ .+.|.+.... ....||+|+++++.+
T Consensus 363 ~~---~~~l~~~~~~~~~~~~~DDit~l~i~~~ 392 (394)
T 3eq2_A 363 GT---LDGLRQVFGLANLAEMPDDIALLVLSRN 392 (394)
T ss_dssp -----CHHHHHHHSCCCSCC--CCCEEEEEC--
T ss_pred hh---HHHHHHHhcccCCCCCCCceEEEEEecc
Confidence 21 2334333332 234699999999864
No 25
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=58.86 E-value=0.12 Score=48.56 Aligned_cols=73 Identities=7% Similarity=-0.039 Sum_probs=56.5
Q ss_pred cccccccCcCccCccccCCceEEEEeCC--CCe----EEEEecCCCCCCCCCHHHHHHhhcC-----CCCHHHHHHHHHH
Q 022320 211 AVARAFGDQSLKAHLSSEPDVRHVPIDP--SIE----FLILASDGLWKQVMKNQEAVDLVKP-----IKDPQAAAKRLTT 279 (299)
Q Consensus 211 ~ltr~lG~~~~~~~v~~~p~~~~~~l~~--g~d----~llL~SDGv~d~~l~~~~i~~i~~~-----~~~~~~~a~~L~~ 279 (299)
.++||+|-.. ..+.++..+.+.+ | + .+++++ |+ ++...++.+++.. ..+.+..++.|++
T Consensus 43 ~l~~~~~l~~-----~~~~d~~~~~~~~~ig-~~~~~~f~~t~---~~-~~~~~~~~~~i~e~~~~~~~~~~~~~~~l~~ 112 (543)
T 3c4z_A 43 PLSKCEALRE-----SLDLGFEGMCLEQPIG-KRLFQQFLRTH---EQ-HGPALQLWKDIEDYDTADDALRPQKAQALRA 112 (543)
T ss_dssp CGGGGHHHHH-----HSCCCHHHHHTSSHHH-HHHHHHHHHHC---GG-GHHHHHHHHHHHHHHTSCTTTHHHHHHHHHH
T ss_pred CchHHHHHHh-----ccccCHHHhhccCccc-HHHHHHHHhcC---Cc-hhHHHHHHhhhhhhccCchhhHHHHHHHHHH
Confidence 6889999766 6778888888887 7 5 444565 78 8888666665544 2477889999999
Q ss_pred HHHhCCCCCCcEEE
Q 022320 280 EALARKSKDDISCI 293 (299)
Q Consensus 280 ~a~~~~~~DNiTvi 293 (299)
.+...++.||++.+
T Consensus 113 ~~~~~~~~d~~~~~ 126 (543)
T 3c4z_A 113 AYLEPQAQLFCSFL 126 (543)
T ss_dssp HHTSTTCTTCCTTS
T ss_pred HhhCchhhhhhccC
Confidence 99999999998875
No 26
>1dgn_A Iceberg (protease inhibitor); antiparallel six-helix bundle, greek-KEY, hydrolase inhibitor; NMR {Homo sapiens} SCOP: a.77.1.3
Probab=26.73 E-value=97 Score=20.94 Aligned_cols=32 Identities=9% Similarity=0.078 Sum_probs=27.2
Q ss_pred CCCHHHHHHhhcCCCCHHHHHHHHHHHHHhCC
Q 022320 254 VMKNQEAVDLVKPIKDPQAAAKRLTTEALARK 285 (299)
Q Consensus 254 ~l~~~~i~~i~~~~~~~~~~a~~L~~~a~~~~ 285 (299)
+++++|...+-.....++..++.|++...+.|
T Consensus 33 VLn~~E~e~i~~~~~t~~dkar~LiD~V~~KG 64 (89)
T 1dgn_A 33 VISQEDMNKVRDENDTVMDKARVLIDLVTGKG 64 (89)
T ss_dssp CSCHHHHHHHHTCCSSHHHHHHHHHHHHHHTC
T ss_pred cccHHHHHHHHhccCchHHHHHHHHHHHHHHh
Confidence 78899999998877777899999999887655
No 27
>3ugs_B Undecaprenyl pyrophosphate synthase; niaid, csgid, structural genomics, center for structural GEN infectious diseases; HET: FFT; 2.46A {Campylobacter jejuni} SCOP: c.101.1.0
Probab=21.37 E-value=3.3e+02 Score=22.01 Aligned_cols=29 Identities=21% Similarity=0.235 Sum_probs=21.8
Q ss_pred eEEEEEEcCCC------------CChHHHHHHHHHHHHHHh
Q 022320 79 LGLFAIFDGHL------------GDRVPTYLKDNLFNNILE 107 (299)
Q Consensus 79 ~~l~~V~DG~G------------G~~~a~~~~~~~~~~~~~ 107 (299)
..+.+|.||-| ||.++......++....+
T Consensus 8 ~HVAiIMDGNrRwAk~rgl~r~~GH~~G~~~~~~i~~~c~~ 48 (225)
T 3ugs_B 8 KHLAVVMDGNRRWARAKGFLAKLGYSQGVKTMQKLMEVCME 48 (225)
T ss_dssp CEEEEEECCCC--------------CHHHHHHHHHHHHHHH
T ss_pred CeEEEeccCcHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 47999999977 777887788888777766
No 28
>4e9m_A Nucleotide-binding oligomerization domain-contain protein 1; innate immunity, RIPK2, protein binding; HET: FLC; 2.15A {Homo sapiens} PDB: 2b1w_A 2dbd_A
Probab=20.62 E-value=1.1e+02 Score=22.81 Aligned_cols=31 Identities=6% Similarity=0.175 Sum_probs=24.2
Q ss_pred CCCHHHHHHhhcCCCCHHHHHHHHHHHHHhCC
Q 022320 254 VMKNQEAVDLVKPIKDPQAAAKRLTTEALARK 285 (299)
Q Consensus 254 ~l~~~~i~~i~~~~~~~~~~a~~L~~~a~~~~ 285 (299)
+++.+|. +++....++.+-+++|++.+..+|
T Consensus 55 vLs~EE~-EiV~~~~T~~dKaRrLLDlV~sKG 85 (144)
T 4e9m_A 55 YFSAEDA-EIVCACPTQPDKVRKILDLVQSKG 85 (144)
T ss_dssp SSCHHHH-HHHHTSSSHHHHHHHHHHHHHHHC
T ss_pred CCCHHHH-HHHhccCChHHHHHHHHHHHHHhh
Confidence 6677888 555667889999999999887654
No 29
>2nz7_A NOD1, caspase recruitment domain-containing protein 4, CARD4; helix swapped, disulfide bond, apoptosis; 1.90A {Homo sapiens} PDB: 2nsn_A
Probab=20.54 E-value=1.2e+02 Score=20.89 Aligned_cols=31 Identities=3% Similarity=0.151 Sum_probs=25.1
Q ss_pred CCCHHHHHHhhcCCCCHHHHHHHHHHHHHhCC
Q 022320 254 VMKNQEAVDLVKPIKDPQAAAKRLTTEALARK 285 (299)
Q Consensus 254 ~l~~~~i~~i~~~~~~~~~~a~~L~~~a~~~~ 285 (299)
++++++ .++......+..-++.|++.+..+|
T Consensus 41 VL~~ee-~~I~~~~~T~~~kaR~Lld~v~~KG 71 (98)
T 2nz7_A 41 YFSAED-AEIVCACPTQPDKVRKILDLVQSKG 71 (98)
T ss_dssp SSCHHH-HHHHHTCCSHHHHHHHHHHHHHHHC
T ss_pred CCCHHH-HHHHccCCCcHHHHHHHHHHHHHHh
Confidence 667888 8888766888899999999887655
Done!