Query 022321
Match_columns 299
No_of_seqs 238 out of 1696
Neff 8.5
Searched_HMMs 46136
Date Fri Mar 29 02:39:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022321.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/022321hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02555 limonoid glucosyltran 100.0 1.4E-57 3.1E-62 433.9 30.9 285 1-290 179-471 (480)
2 PLN02410 UDP-glucoronosyl/UDP- 100.0 3.6E-57 7.9E-62 429.2 29.8 276 1-288 172-450 (451)
3 PLN02207 UDP-glycosyltransfera 100.0 3.9E-57 8.6E-62 429.3 29.7 275 2-290 182-467 (468)
4 PLN02173 UDP-glucosyl transfer 100.0 4.5E-56 9.7E-61 420.5 29.0 279 1-287 159-447 (449)
5 PLN03015 UDP-glucosyl transfer 100.0 1.1E-55 2.4E-60 418.3 28.4 272 1-287 172-467 (470)
6 PLN02992 coniferyl-alcohol glu 100.0 3.1E-55 6.6E-60 417.2 28.5 274 1-289 168-470 (481)
7 PLN02152 indole-3-acetate beta 100.0 8.4E-55 1.8E-59 412.4 29.0 281 1-286 160-454 (455)
8 PLN00164 glucosyltransferase; 100.0 8.9E-55 1.9E-59 416.4 29.4 279 1-291 174-476 (480)
9 PLN02562 UDP-glycosyltransfera 100.0 9.2E-55 2E-59 413.4 29.1 272 1-287 171-448 (448)
10 PLN02210 UDP-glucosyl transfer 100.0 2.8E-54 6.2E-59 410.5 29.8 281 1-287 166-454 (456)
11 PLN02167 UDP-glycosyltransfera 100.0 4.9E-54 1.1E-58 411.6 28.3 275 3-290 187-474 (475)
12 PLN02554 UDP-glycosyltransfera 100.0 6.6E-54 1.4E-58 411.3 27.7 273 3-289 182-479 (481)
13 PLN02863 UDP-glucoronosyl/UDP- 100.0 1.5E-53 3.2E-58 407.1 28.4 286 1-290 180-473 (477)
14 PLN03004 UDP-glycosyltransfera 100.0 1.4E-53 3.1E-58 403.6 24.9 263 1-277 176-450 (451)
15 PLN02764 glycosyltransferase f 100.0 1.3E-52 2.7E-57 396.2 28.8 272 4-291 166-448 (453)
16 PLN02534 UDP-glycosyltransfera 100.0 1.5E-52 3.3E-57 400.1 28.6 279 4-290 187-488 (491)
17 PLN02670 transferase, transfer 100.0 5.2E-52 1.1E-56 394.6 27.1 277 4-290 182-467 (472)
18 PLN02208 glycosyltransferase f 100.0 8.8E-52 1.9E-56 391.5 27.9 266 4-289 165-440 (442)
19 PLN03007 UDP-glucosyltransfera 100.0 4.4E-51 9.5E-56 392.1 29.5 268 20-289 202-481 (482)
20 PLN02448 UDP-glycosyltransfera 100.0 3.6E-51 7.8E-56 390.7 28.6 273 2-289 177-458 (459)
21 PLN00414 glycosyltransferase f 100.0 1.5E-50 3.2E-55 383.5 27.5 253 24-290 181-442 (446)
22 PF00201 UDPGT: UDP-glucoronos 100.0 5.5E-43 1.2E-47 338.6 10.9 200 34-268 225-426 (500)
23 PHA03392 egt ecdysteroid UDP-g 100.0 2E-40 4.4E-45 319.4 23.6 224 31-290 241-468 (507)
24 KOG1192 UDP-glucuronosyl and U 100.0 2E-35 4.4E-40 285.3 20.1 208 33-266 222-437 (496)
25 TIGR01426 MGT glycosyltransfer 100.0 6E-28 1.3E-32 226.8 21.5 206 38-286 182-389 (392)
26 COG1819 Glycosyl transferases, 100.0 1.7E-27 3.7E-32 224.1 18.3 166 102-289 235-401 (406)
27 cd03784 GT1_Gtf_like This fami 99.9 2.9E-25 6.2E-30 209.0 16.8 157 91-266 228-386 (401)
28 PRK12446 undecaprenyldiphospho 99.6 7.4E-15 1.6E-19 136.3 16.7 145 101-260 182-335 (352)
29 COG0707 MurG UDP-N-acetylgluco 99.5 3E-13 6.6E-18 125.0 14.5 147 103-261 182-338 (357)
30 PF04101 Glyco_tran_28_C: Glyc 99.5 1.2E-15 2.5E-20 126.8 -1.7 136 106-249 1-145 (167)
31 PF13528 Glyco_trans_1_3: Glyc 99.5 3.9E-13 8.4E-18 122.6 11.3 121 103-245 191-317 (318)
32 TIGR00661 MJ1255 conserved hyp 99.5 5.4E-13 1.2E-17 122.3 11.8 123 103-249 187-315 (321)
33 PRK00726 murG undecaprenyldiph 99.2 3.4E-10 7.4E-15 104.9 14.3 84 163-249 236-325 (357)
34 PLN02605 monogalactosyldiacylg 99.2 1.4E-08 3.1E-13 95.2 23.2 188 33-248 148-347 (382)
35 PRK13609 diacylglycerol glucos 99.2 1E-08 2.2E-13 95.9 22.1 133 103-249 201-339 (380)
36 cd03785 GT1_MurG MurG is an N- 99.1 1.3E-09 2.7E-14 100.5 15.0 136 103-249 180-325 (350)
37 PRK13608 diacylglycerol glucos 99.1 6.7E-09 1.4E-13 97.8 17.8 144 103-260 201-351 (391)
38 TIGR01133 murG undecaprenyldip 98.9 2E-08 4.4E-13 92.4 13.8 76 171-249 243-322 (348)
39 TIGR03492 conserved hypothetic 98.9 1.5E-07 3.3E-12 88.8 18.3 179 33-249 158-365 (396)
40 TIGR03590 PseG pseudaminic aci 98.8 3.1E-08 6.6E-13 89.2 10.1 103 105-218 171-278 (279)
41 COG4671 Predicted glycosyl tra 98.7 4.7E-07 1E-11 81.8 15.5 183 36-249 168-366 (400)
42 TIGR00215 lpxB lipid-A-disacch 98.6 2.8E-07 6E-12 86.7 11.7 165 101-278 188-378 (385)
43 PRK00025 lpxB lipid-A-disaccha 98.6 4.4E-07 9.6E-12 84.7 12.8 73 173-249 256-342 (380)
44 cd03814 GT1_like_2 This family 98.4 8.6E-05 1.9E-09 67.5 21.6 129 104-249 196-333 (364)
45 cd04946 GT1_AmsK_like This fam 98.3 0.00012 2.7E-09 69.3 20.5 112 161-283 288-406 (407)
46 cd03804 GT1_wbaZ_like This fam 98.2 4.3E-05 9.3E-10 70.3 14.9 126 108-249 198-327 (351)
47 KOG3349 Predicted glycosyltran 98.2 9.5E-06 2.1E-10 64.8 7.9 115 105-227 4-130 (170)
48 cd03801 GT1_YqgM_like This fam 98.2 0.00096 2.1E-08 59.9 22.1 82 160-249 254-342 (374)
49 cd03798 GT1_wlbH_like This fam 98.1 0.0015 3.2E-08 59.0 22.0 84 161-250 258-346 (377)
50 PRK05749 3-deoxy-D-manno-octul 98.0 0.0014 3E-08 62.4 21.7 92 164-261 304-402 (425)
51 cd03823 GT1_ExpE7_like This fa 98.0 0.0003 6.5E-09 63.7 16.4 133 103-249 189-330 (359)
52 cd03799 GT1_amsK_like This is 98.0 0.00085 1.8E-08 61.1 18.1 135 104-249 178-328 (355)
53 cd03808 GT1_cap1E_like This fa 98.0 0.0012 2.7E-08 59.2 18.9 134 103-249 186-330 (359)
54 PF13844 Glyco_transf_41: Glyc 98.0 0.00022 4.7E-09 68.2 14.2 140 103-249 283-431 (468)
55 PRK15484 lipopolysaccharide 1, 97.9 0.00079 1.7E-08 63.1 17.7 84 160-250 255-346 (380)
56 cd03817 GT1_UGDG_like This fam 97.9 0.00024 5.3E-09 64.5 13.7 144 104-264 201-360 (374)
57 cd03822 GT1_ecORF704_like This 97.9 0.003 6.6E-08 57.4 20.6 93 161-260 246-347 (366)
58 cd03795 GT1_like_4 This family 97.9 0.00046 9.9E-09 63.0 14.6 141 105-261 191-346 (357)
59 PRK15427 colanic acid biosynth 97.9 0.00099 2.1E-08 63.2 17.0 111 161-286 278-403 (406)
60 PF00534 Glycos_transf_1: Glyc 97.9 0.0004 8.7E-09 57.0 12.6 135 103-249 13-159 (172)
61 cd03794 GT1_wbuB_like This fam 97.9 0.00038 8.2E-09 63.4 13.7 145 103-261 218-379 (394)
62 cd05844 GT1_like_7 Glycosyltra 97.8 0.00037 8.1E-09 64.1 13.5 81 161-249 244-337 (367)
63 PLN02871 UDP-sulfoquinovose:DA 97.8 0.0052 1.1E-07 59.2 21.6 137 106-260 264-413 (465)
64 cd03820 GT1_amsD_like This fam 97.8 0.0028 6.2E-08 56.6 18.6 93 161-260 234-332 (348)
65 TIGR00236 wecB UDP-N-acetylglu 97.8 0.0004 8.8E-09 64.6 13.1 129 104-249 197-335 (365)
66 cd03800 GT1_Sucrose_synthase T 97.8 0.0012 2.6E-08 61.2 16.3 92 161-260 282-381 (398)
67 cd03821 GT1_Bme6_like This fam 97.8 0.00061 1.3E-08 61.7 14.0 93 161-261 261-359 (375)
68 cd03786 GT1_UDP-GlcNAc_2-Epime 97.8 0.00027 5.8E-09 65.4 11.4 134 103-249 197-338 (363)
69 cd04949 GT1_gtfA_like This fam 97.7 0.0034 7.5E-08 58.1 18.1 99 161-264 260-362 (372)
70 PRK09922 UDP-D-galactose:(gluc 97.7 0.0015 3.2E-08 60.6 15.1 147 105-264 180-343 (359)
71 PRK10307 putative glycosyl tra 97.7 0.0038 8.1E-08 59.0 18.1 114 162-288 284-407 (412)
72 cd03825 GT1_wcfI_like This fam 97.7 0.0027 5.9E-08 58.0 16.3 93 160-260 242-343 (365)
73 cd03807 GT1_WbnK_like This fam 97.7 0.0019 4E-08 58.3 14.9 79 161-249 250-333 (365)
74 KOG4626 O-linked N-acetylgluco 97.6 0.0015 3.2E-08 63.5 14.0 138 102-248 756-904 (966)
75 cd04962 GT1_like_5 This family 97.6 0.0036 7.9E-08 57.6 16.3 93 161-261 252-350 (371)
76 cd03809 GT1_mtfB_like This fam 97.6 0.0055 1.2E-07 55.7 17.1 82 160-249 251-337 (365)
77 TIGR03088 stp2 sugar transfera 97.5 0.0062 1.3E-07 56.5 16.1 80 162-249 255-339 (374)
78 cd03816 GT1_ALG1_like This fam 97.5 0.0037 8E-08 59.4 14.6 91 162-262 294-399 (415)
79 COG3980 spsG Spore coat polysa 97.4 0.0023 4.9E-08 56.7 11.7 132 106-249 160-294 (318)
80 TIGR02918 accessory Sec system 97.4 0.018 3.8E-07 56.2 19.2 98 161-264 375-483 (500)
81 PF13692 Glyco_trans_1_4: Glyc 97.4 0.00086 1.9E-08 52.8 8.2 80 161-248 52-135 (135)
82 cd04950 GT1_like_1 Glycosyltra 97.4 0.026 5.6E-07 52.7 19.1 183 30-249 148-341 (373)
83 PRK14089 ipid-A-disaccharide s 97.4 0.001 2.2E-08 61.6 9.4 216 30-265 71-332 (347)
84 cd04951 GT1_WbdM_like This fam 97.4 0.005 1.1E-07 56.1 13.8 128 104-249 187-327 (360)
85 TIGR02149 glgA_Coryne glycogen 97.4 0.0066 1.4E-07 56.4 14.7 142 106-260 202-365 (388)
86 TIGR03449 mycothiol_MshA UDP-N 97.4 0.0066 1.4E-07 57.0 14.8 92 161-260 282-381 (405)
87 TIGR02472 sucr_P_syn_N sucrose 97.3 0.035 7.6E-07 53.1 19.7 83 161-249 316-407 (439)
88 PRK09814 beta-1,6-galactofuran 97.3 0.002 4.3E-08 59.3 10.5 111 160-284 205-331 (333)
89 cd03819 GT1_WavL_like This fam 97.3 0.0053 1.1E-07 56.0 13.1 150 103-262 183-346 (355)
90 TIGR03087 stp1 sugar transfera 97.3 0.014 3E-07 54.9 16.3 90 161-260 279-375 (397)
91 COG5017 Uncharacterized conser 97.3 0.003 6.5E-08 49.9 9.3 108 107-230 2-122 (161)
92 cd03818 GT1_ExpC_like This fam 97.2 0.015 3.3E-07 54.6 15.7 82 162-249 281-367 (396)
93 cd03805 GT1_ALG2_like This fam 97.2 0.0073 1.6E-07 56.2 13.3 91 161-260 279-377 (392)
94 cd03811 GT1_WabH_like This fam 97.2 0.012 2.6E-07 52.5 14.2 136 103-249 187-333 (353)
95 PF02350 Epimerase_2: UDP-N-ac 97.2 0.0018 3.8E-08 60.2 8.6 184 34-248 121-318 (346)
96 PF02684 LpxB: Lipid-A-disacch 97.1 0.019 4E-07 53.8 14.9 206 44-277 140-366 (373)
97 cd03796 GT1_PIG-A_like This fa 97.0 0.031 6.7E-07 52.5 15.6 131 104-249 192-334 (398)
98 cd03792 GT1_Trehalose_phosphor 96.9 0.039 8.5E-07 51.2 15.5 90 161-260 251-350 (372)
99 cd03812 GT1_CapH_like This fam 96.9 0.026 5.6E-07 51.5 13.9 136 104-250 191-333 (358)
100 cd04955 GT1_like_6 This family 96.9 0.03 6.5E-07 51.1 14.0 124 108-249 196-331 (363)
101 COG1519 KdtA 3-deoxy-D-manno-o 96.9 0.0068 1.5E-07 56.7 9.3 210 34-266 176-405 (419)
102 cd03813 GT1_like_3 This family 96.8 0.063 1.4E-06 52.0 16.1 81 161-249 353-443 (475)
103 cd03802 GT1_AviGT4_like This f 96.7 0.028 6.1E-07 50.7 12.3 129 106-248 172-308 (335)
104 PLN02949 transferase, transfer 96.7 0.061 1.3E-06 52.0 14.6 92 161-260 334-436 (463)
105 COG3914 Spy Predicted O-linked 96.5 0.032 7E-07 54.1 11.6 136 102-243 427-573 (620)
106 PRK15179 Vi polysaccharide bio 96.5 0.12 2.6E-06 52.4 15.9 93 161-260 573-672 (694)
107 PRK10017 colanic acid biosynth 96.3 0.22 4.9E-06 47.5 15.6 162 96-264 226-410 (426)
108 PHA01633 putative glycosyl tra 96.2 0.21 4.5E-06 46.2 14.7 86 160-248 199-307 (335)
109 cd03806 GT1_ALG11_like This fa 96.2 0.48 1E-05 45.1 17.7 79 161-249 304-393 (419)
110 PRK01021 lpxB lipid-A-disaccha 96.2 0.4 8.6E-06 47.5 17.2 194 44-265 368-589 (608)
111 TIGR02468 sucrsPsyn_pln sucros 96.0 0.22 4.8E-06 52.3 15.2 95 161-261 547-651 (1050)
112 PRK15490 Vi polysaccharide bio 95.8 0.39 8.4E-06 47.3 15.1 114 161-288 454-575 (578)
113 PF06722 DUF1205: Protein of u 95.8 0.0094 2E-07 44.8 3.1 51 93-143 29-84 (97)
114 PRK14098 glycogen synthase; Pr 95.8 0.22 4.8E-06 48.5 13.5 133 106-247 308-450 (489)
115 PF13524 Glyco_trans_1_2: Glyc 95.7 0.11 2.4E-06 38.0 8.6 82 187-283 9-91 (92)
116 PLN02275 transferase, transfer 95.5 0.28 6E-06 45.8 12.8 75 162-246 286-371 (371)
117 PF04007 DUF354: Protein of un 95.5 0.56 1.2E-05 43.4 14.3 138 90-246 166-308 (335)
118 TIGR02095 glgA glycogen/starch 95.5 0.33 7.2E-06 46.8 13.6 132 105-247 291-436 (473)
119 TIGR03568 NeuC_NnaA UDP-N-acet 95.4 0.21 4.5E-06 46.7 11.5 130 104-247 201-338 (365)
120 TIGR03713 acc_sec_asp1 accesso 95.3 0.58 1.2E-05 45.9 14.5 91 162-265 409-506 (519)
121 cd03791 GT1_Glycogen_synthase_ 95.3 0.26 5.6E-06 47.4 11.9 133 105-247 296-441 (476)
122 PRK00654 glgA glycogen synthas 95.1 0.64 1.4E-05 44.8 14.0 136 105-247 282-427 (466)
123 PHA01630 putative group 1 glyc 94.4 0.88 1.9E-05 41.9 12.5 78 169-249 197-295 (331)
124 COG0763 LpxB Lipid A disacchar 94.3 1.3 2.8E-05 41.3 13.3 217 35-285 136-378 (381)
125 PLN02501 digalactosyldiacylgly 93.7 5.3 0.00011 40.6 16.9 76 163-249 602-682 (794)
126 TIGR02919 accessory Sec system 93.5 4.2 9E-05 39.1 15.6 189 22-264 226-425 (438)
127 PF06258 Mito_fiss_Elm1: Mitoc 92.7 1.3 2.9E-05 40.5 10.5 58 171-231 221-282 (311)
128 cd01635 Glycosyltransferase_GT 92.4 0.84 1.8E-05 38.0 8.4 48 161-210 160-215 (229)
129 PLN02316 synthase/transferase 92.2 11 0.00024 40.1 17.5 114 161-283 899-1028(1036)
130 PLN02846 digalactosyldiacylgly 92.1 3.2 6.9E-05 40.1 12.7 73 166-249 288-364 (462)
131 PLN02939 transferase, transfer 92.1 7.8 0.00017 40.7 16.1 84 161-247 836-930 (977)
132 TIGR02193 heptsyl_trn_I lipopo 91.7 1.3 2.8E-05 40.2 9.3 138 96-246 171-319 (319)
133 TIGR02400 trehalose_OtsA alpha 90.6 4.6 9.9E-05 39.0 12.2 103 168-287 342-455 (456)
134 COG0381 WecB UDP-N-acetylgluco 89.0 5.8 0.00013 37.2 11.0 87 162-261 262-351 (383)
135 PRK10125 putative glycosyl tra 88.8 16 0.00035 34.5 14.3 99 122-242 258-365 (405)
136 PLN00142 sucrose synthase 85.5 5.8 0.00013 41.0 9.7 57 184-246 670-730 (815)
137 cd03788 GT1_TPS Trehalose-6-Ph 85.3 7.7 0.00017 37.4 10.1 73 166-249 345-428 (460)
138 cd03789 GT1_LPS_heptosyltransf 84.3 3.5 7.6E-05 36.6 6.8 95 104-206 121-223 (279)
139 cd03793 GT1_Glycogen_synthase_ 83.6 4.4 9.6E-05 40.2 7.6 76 172-249 468-553 (590)
140 TIGR02470 sucr_synth sucrose s 83.0 7.9 0.00017 39.9 9.4 80 161-246 618-707 (784)
141 PRK14099 glycogen synthase; Pr 82.2 23 0.0005 34.4 12.1 86 161-249 349-448 (485)
142 PF05159 Capsule_synth: Capsul 80.7 9.5 0.00021 33.8 8.2 43 163-208 184-226 (269)
143 TIGR02195 heptsyl_trn_II lipop 77.0 14 0.0003 33.7 8.3 96 103-206 173-276 (334)
144 PLN03063 alpha,alpha-trehalose 76.2 15 0.00032 38.2 9.0 100 174-289 371-478 (797)
145 PF01075 Glyco_transf_9: Glyco 75.8 8 0.00017 33.4 6.1 98 103-206 104-208 (247)
146 TIGR02201 heptsyl_trn_III lipo 75.4 14 0.0003 33.9 7.9 98 103-206 180-285 (344)
147 COG0438 RfaG Glycosyltransfera 74.5 56 0.0012 28.2 15.8 80 162-249 257-343 (381)
148 PRK10422 lipopolysaccharide co 71.9 16 0.00035 33.6 7.5 98 103-206 182-287 (352)
149 PRK12446 undecaprenyldiphospho 71.7 17 0.00038 33.6 7.6 98 105-206 3-120 (352)
150 PRK10916 ADP-heptose:LPS hepto 70.1 19 0.00041 33.1 7.5 96 103-206 179-286 (348)
151 PRK10964 ADP-heptose:LPS hepto 68.4 25 0.00054 31.9 7.8 132 104-247 178-321 (322)
152 PF00731 AIRC: AIR carboxylase 68.1 64 0.0014 26.2 10.5 137 106-267 2-148 (150)
153 PF04464 Glyphos_transf: CDP-G 66.9 7.1 0.00015 36.2 4.0 108 161-277 251-362 (369)
154 PRK14501 putative bifunctional 65.5 29 0.00064 35.6 8.4 111 166-289 346-463 (726)
155 PF06506 PrpR_N: Propionate ca 65.3 8.4 0.00018 31.9 3.7 33 177-210 31-63 (176)
156 TIGR02398 gluc_glyc_Psyn gluco 62.8 1.6E+02 0.0034 28.8 15.7 109 164-289 364-483 (487)
157 COG0859 RfaF ADP-heptose:LPS h 62.6 28 0.00061 31.9 7.0 95 104-206 175-276 (334)
158 PF07429 Glyco_transf_56: 4-al 62.0 1.1E+02 0.0024 28.5 10.4 130 105-247 184-332 (360)
159 PRK02797 4-alpha-L-fucosyltran 60.7 43 0.00092 30.7 7.5 128 106-246 146-292 (322)
160 KOG2941 Beta-1,4-mannosyltrans 60.4 1.5E+02 0.0032 27.8 13.5 143 103-261 253-423 (444)
161 COG4370 Uncharacterized protei 56.8 34 0.00075 31.3 6.1 78 168-249 301-380 (412)
162 PLN02470 acetolactate synthase 54.8 1.6E+02 0.0035 29.3 11.3 78 122-207 16-109 (585)
163 COG0801 FolK 7,8-dihydro-6-hyd 53.9 28 0.0006 28.6 4.7 35 106-140 3-37 (160)
164 COG3660 Predicted nucleoside-d 53.7 1.7E+02 0.0037 26.4 11.4 113 107-230 165-298 (329)
165 cd07025 Peptidase_S66 LD-Carbo 51.3 29 0.00063 31.1 5.0 75 115-208 44-120 (282)
166 cd01840 SGNH_hydrolase_yrhL_li 50.4 52 0.0011 26.1 5.9 38 103-141 50-87 (150)
167 PF06180 CbiK: Cobalt chelatas 50.0 21 0.00045 31.8 3.7 39 105-143 2-43 (262)
168 cd03412 CbiK_N Anaerobic cobal 49.1 31 0.00067 27.0 4.2 37 105-141 2-40 (127)
169 PRK01231 ppnK inorganic polyph 47.5 1.5E+02 0.0032 26.9 8.9 54 178-249 62-119 (295)
170 PLN02929 NADH kinase 47.4 44 0.00095 30.5 5.4 66 178-249 64-138 (301)
171 PRK10353 3-methyl-adenine DNA 45.9 90 0.0019 26.3 6.7 45 205-249 22-83 (187)
172 COG3195 Uncharacterized protei 44.8 1.3E+02 0.0028 24.8 7.1 89 175-265 69-163 (176)
173 TIGR01761 thiaz-red thiazoliny 44.3 1.1E+02 0.0025 28.3 7.8 112 125-249 17-137 (343)
174 PRK06718 precorrin-2 dehydroge 43.6 70 0.0015 27.1 5.9 146 98-268 6-165 (202)
175 PRK06270 homoserine dehydrogen 42.0 2.7E+02 0.0058 25.7 9.9 59 171-230 80-150 (341)
176 PF08030 NAD_binding_6: Ferric 42.0 21 0.00045 28.4 2.3 39 105-143 3-46 (156)
177 PRK01911 ppnK inorganic polyph 40.1 79 0.0017 28.6 5.9 55 177-249 63-121 (292)
178 cd07062 Peptidase_S66_mccF_lik 39.6 56 0.0012 29.7 5.0 74 116-208 49-124 (308)
179 cd07038 TPP_PYR_PDC_IPDC_like 39.3 61 0.0013 26.3 4.7 28 181-208 60-93 (162)
180 cd07039 TPP_PYR_POX Pyrimidine 38.8 2.1E+02 0.0046 23.2 10.4 28 181-208 64-97 (164)
181 PRK04539 ppnK inorganic polyph 38.8 93 0.002 28.2 6.2 55 177-249 67-125 (296)
182 PRK06276 acetolactate synthase 37.7 1.9E+02 0.0041 28.8 8.8 27 181-207 64-96 (586)
183 PRK14077 pnk inorganic polypho 37.1 83 0.0018 28.4 5.6 55 177-249 63-121 (287)
184 PRK03372 ppnK inorganic polyph 37.0 89 0.0019 28.5 5.8 55 177-249 71-129 (306)
185 PRK07710 acetolactate synthase 36.4 1.7E+02 0.0038 28.9 8.3 27 181-207 79-111 (571)
186 PRK02155 ppnK NAD(+)/NADH kina 36.4 81 0.0018 28.5 5.4 54 178-249 63-120 (291)
187 PRK02649 ppnK inorganic polyph 36.3 71 0.0015 29.1 5.1 54 178-249 68-125 (305)
188 COG0041 PurE Phosphoribosylcar 35.7 2.4E+02 0.0053 23.0 12.0 139 106-271 4-154 (162)
189 PF05693 Glycogen_syn: Glycoge 35.7 41 0.00088 33.7 3.5 95 171-265 462-566 (633)
190 TIGR01470 cysG_Nterm siroheme 35.5 2.2E+02 0.0048 24.1 7.8 149 98-268 5-165 (205)
191 TIGR00118 acolac_lg acetolacta 34.6 3.6E+02 0.0078 26.6 10.2 27 181-207 65-97 (558)
192 PF05225 HTH_psq: helix-turn-h 34.5 80 0.0017 19.8 3.7 27 234-262 1-27 (45)
193 PLN03064 alpha,alpha-trehalose 34.4 5.8E+02 0.013 27.3 11.9 102 170-289 448-562 (934)
194 KOG0853 Glycosyltransferase [C 34.4 66 0.0014 31.4 4.7 51 192-249 381-434 (495)
195 COG2327 WcaK Polysaccharide py 34.0 2.2E+02 0.0047 27.0 7.9 70 173-249 280-351 (385)
196 PRK08322 acetolactate synthase 33.8 1.8E+02 0.0039 28.5 7.9 27 181-207 64-96 (547)
197 cd06533 Glyco_transf_WecG_TagA 33.7 2.7E+02 0.0057 22.8 9.1 87 35-142 46-133 (171)
198 PRK14092 2-amino-4-hydroxy-6-h 33.6 1E+02 0.0022 25.4 5.1 30 103-132 6-35 (163)
199 PRK03378 ppnK inorganic polyph 33.5 1E+02 0.0022 27.9 5.6 55 177-249 62-120 (292)
200 PF10093 DUF2331: Uncharacteri 32.9 70 0.0015 30.1 4.5 87 118-208 193-290 (374)
201 PRK14075 pnk inorganic polypho 32.8 1.5E+02 0.0032 26.2 6.5 53 179-249 42-95 (256)
202 PF02776 TPP_enzyme_N: Thiamin 32.2 1.1E+02 0.0024 24.9 5.3 27 182-208 66-98 (172)
203 TIGR03609 S_layer_CsaB polysac 32.1 3.6E+02 0.0078 23.9 9.6 112 104-225 172-290 (298)
204 PRK15062 hydrogenase isoenzyme 32.1 3E+02 0.0065 25.8 8.3 61 221-289 209-269 (364)
205 PRK06276 acetolactate synthase 31.5 3.1E+02 0.0068 27.2 9.2 59 184-247 470-531 (586)
206 COG1609 PurR Transcriptional r 30.9 3.3E+02 0.0071 24.9 8.6 40 96-135 168-207 (333)
207 cd07035 TPP_PYR_POX_like Pyrim 30.8 2.7E+02 0.0058 21.9 10.3 26 183-208 62-93 (155)
208 PLN02935 Bifunctional NADH kin 30.6 92 0.002 30.5 5.0 54 178-249 262-319 (508)
209 PF04558 tRNA_synt_1c_R1: Glut 30.2 54 0.0012 27.0 2.9 30 215-249 104-133 (164)
210 COG2230 Cfa Cyclopropane fatty 30.1 45 0.00098 30.0 2.7 39 188-226 81-121 (283)
211 COG4394 Uncharacterized protei 29.2 4.5E+02 0.0097 24.0 10.3 151 121-286 190-368 (370)
212 PRK07525 sulfoacetaldehyde ace 28.7 4.5E+02 0.0097 26.2 9.8 28 180-207 68-101 (588)
213 COG2159 Predicted metal-depend 28.7 2.8E+02 0.006 25.0 7.6 92 93-196 117-210 (293)
214 cd07037 TPP_PYR_MenD Pyrimidin 28.6 47 0.001 27.2 2.4 26 183-208 63-94 (162)
215 PRK04885 ppnK inorganic polyph 28.5 51 0.0011 29.4 2.7 53 179-249 36-94 (265)
216 PRK08199 thiamine pyrophosphat 28.4 3.4E+02 0.0074 26.7 8.8 27 181-207 72-104 (557)
217 PF00289 CPSase_L_chain: Carba 28.3 1.1E+02 0.0025 23.1 4.3 68 120-197 12-89 (110)
218 TIGR03845 sulfopyru_alph sulfo 28.2 1.2E+02 0.0027 24.5 4.8 25 183-207 62-91 (157)
219 PRK06546 pyruvate dehydrogenas 28.2 4.9E+02 0.011 25.9 9.9 58 184-247 459-518 (578)
220 PF03808 Glyco_tran_WecB: Glyc 27.2 3.5E+02 0.0075 22.1 9.3 87 35-141 48-134 (172)
221 COG0409 HypD Hydrogenase matur 27.1 2.6E+02 0.0056 25.9 6.8 61 221-289 210-270 (364)
222 PLN02948 phosphoribosylaminoim 27.0 6.5E+02 0.014 25.2 14.3 141 103-271 409-562 (577)
223 PRK00923 sirohydrochlorin coba 26.8 2.8E+02 0.0061 21.1 6.4 37 104-140 2-40 (126)
224 PRK04761 ppnK inorganic polyph 26.6 54 0.0012 28.9 2.5 28 179-208 26-57 (246)
225 PRK09107 acetolactate synthase 26.6 4.9E+02 0.011 26.0 9.6 59 184-247 481-542 (595)
226 PRK08155 acetolactate synthase 26.0 2.3E+02 0.0051 28.0 7.2 27 181-207 77-109 (564)
227 PRK14076 pnk inorganic polypho 26.0 1.1E+02 0.0023 30.6 4.7 53 181-249 349-405 (569)
228 cd03409 Chelatase_Class_II Cla 26.0 2.5E+02 0.0055 20.1 6.3 36 106-141 2-40 (101)
229 PRK08979 acetolactate synthase 25.4 4E+02 0.0087 26.4 8.7 59 184-247 472-533 (572)
230 TIGR02482 PFKA_ATP 6-phosphofr 25.1 73 0.0016 29.0 3.1 37 175-211 86-126 (301)
231 PRK03501 ppnK inorganic polyph 24.7 1.8E+02 0.004 25.8 5.6 54 179-249 40-98 (264)
232 TIGR00173 menD 2-succinyl-5-en 24.6 1.6E+02 0.0034 28.1 5.5 25 182-206 65-95 (432)
233 PF10083 DUF2321: Uncharacteri 24.3 1.9E+02 0.0042 23.6 5.0 74 206-288 78-151 (158)
234 TIGR01498 folK 2-amino-4-hydro 23.6 1E+02 0.0023 24.1 3.4 28 107-134 1-28 (127)
235 cd03784 GT1_Gtf_like This fami 23.6 3.4E+02 0.0074 25.0 7.6 37 105-143 2-38 (401)
236 PRK15424 propionate catabolism 23.3 2.3E+02 0.005 28.1 6.4 29 181-210 65-93 (538)
237 TIGR01133 murG undecaprenyldip 23.2 5E+02 0.011 23.1 8.4 34 107-141 3-36 (348)
238 PF06204 CBM_X: Putative carbo 23.1 35 0.00077 23.5 0.6 22 170-191 25-46 (66)
239 PRK03708 ppnK inorganic polyph 23.1 68 0.0015 28.8 2.5 52 182-249 59-113 (277)
240 TIGR02329 propionate_PrpR prop 22.6 2.6E+02 0.0056 27.7 6.6 30 180-210 54-83 (526)
241 TIGR00147 lipid kinase, YegS/R 22.4 1.9E+02 0.0041 25.7 5.3 27 182-208 59-91 (293)
242 PLN02859 glutamine-tRNA ligase 22.2 1.4E+02 0.0031 30.9 4.8 43 221-267 111-157 (788)
243 PRK11914 diacylglycerol kinase 22.1 4.9E+02 0.011 23.2 8.0 26 183-208 67-96 (306)
244 TIGR00624 tag DNA-3-methyladen 21.9 2.4E+02 0.0052 23.6 5.4 45 205-249 21-82 (179)
245 cd00763 Bacterial_PFK Phosphof 21.7 97 0.0021 28.4 3.3 38 174-211 86-126 (317)
246 TIGR00118 acolac_lg acetolacta 21.2 7E+02 0.015 24.5 9.5 59 184-247 463-524 (558)
247 PF11740 KfrA_N: Plasmid repli 21.2 2E+02 0.0042 21.7 4.5 49 233-291 1-49 (120)
248 TIGR03457 sulphoacet_xsc sulfo 21.1 6.2E+02 0.013 25.1 9.1 27 181-207 65-97 (579)
249 PF02826 2-Hacid_dh_C: D-isome 20.9 2.8E+02 0.006 22.7 5.7 103 103-244 36-143 (178)
250 TIGR02483 PFK_mixed phosphofru 20.8 1E+02 0.0023 28.3 3.3 38 174-211 88-128 (324)
251 PRK07092 benzoylformate decarb 20.5 3.4E+02 0.0073 26.6 7.1 25 183-207 76-106 (530)
252 PF08452 DNAP_B_exo_N: DNA pol 20.5 48 0.001 17.4 0.6 17 93-109 4-20 (22)
253 PRK08266 hypothetical protein; 20.5 6.9E+02 0.015 24.4 9.3 58 184-247 453-513 (542)
254 PRK01185 ppnK inorganic polyph 20.4 2E+02 0.0043 25.7 4.9 54 178-249 52-106 (271)
255 COG0855 Ppk Polyphosphate kina 20.3 4.1E+02 0.009 27.0 7.3 100 22-139 329-432 (696)
256 COG3340 PepE Peptidase E [Amin 20.1 5.8E+02 0.013 22.1 8.9 45 94-139 24-68 (224)
257 PRK14071 6-phosphofructokinase 20.0 1E+02 0.0022 28.8 3.1 38 174-211 101-142 (360)
No 1
>PLN02555 limonoid glucosyltransferase
Probab=100.00 E-value=1.4e-57 Score=433.86 Aligned_cols=285 Identities=34% Similarity=0.711 Sum_probs=244.1
Q ss_pred CCCCCCCCCCcccccCCCchhHHHHHHHHHhhccCccEEEEcCcccccHHHHHHHHhcCCCEEEeCcccCCccccccccc
Q 022321 1 MSNIRLRDLPSFIRTTDPNEIMFDFMGSEAQNCFRSSAIIFNTFDEFEHAALEVIASKFPNIYTVGPLPLLCKQVDETKF 80 (299)
Q Consensus 1 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~LE~~~~~~~r~~~p~v~~VGpl~~~~~~~~~~~~ 80 (299)
||+++.+|||++++..+..+.++..+.+.++.+.+++++|+|||++||+.+++.++...| ++.|||++....... .
T Consensus 179 lp~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~a~~vlvNTf~eLE~~~~~~l~~~~~-v~~iGPl~~~~~~~~-~-- 254 (480)
T PLN02555 179 MPLLKYDEIPSFLHPSSPYPFLRRAILGQYKNLDKPFCILIDTFQELEKEIIDYMSKLCP-IKPVGPLFKMAKTPN-S-- 254 (480)
T ss_pred CCCcCHhhCcccccCCCCchHHHHHHHHHHHhcccCCEEEEEchHHHhHHHHHHHhhCCC-EEEeCcccCcccccc-c--
Confidence 467899999988764434555667777888888999999999999999999999987555 999999975322100 0
Q ss_pred ccCCCCCcccchhhhHhhccCCCCceEEEeecCCcccCHHHHHHHHHHHHcCCCCEEEEEcCCCCC--CCCcCCChhhhh
Q 022321 81 RSFGSSLWKEDTDCLKWLDKRDANSVVYVNYGSVTVMSEQHLTEFAWGLANSKRPFLWILRPDVVM--GDSVVLPDEYFE 158 (299)
Q Consensus 81 ~~l~~~~~~~~~~~~~wl~~~~~~~vVyvsfGS~~~~~~~~~~~l~~al~~~~~~~iw~~~~~~~~--~~~~~l~~~~~~ 158 (299)
....+++..+++|.+|||++++++||||||||+..++.+++.+++.+|+.++++|||+++..... .....+|+++.+
T Consensus 255 -~~~~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~~~~~q~~ela~~l~~~~~~flW~~~~~~~~~~~~~~~lp~~~~~ 333 (480)
T PLN02555 255 -DVKGDISKPADDCIEWLDSKPPSSVVYISFGTVVYLKQEQIDEIAYGVLNSGVSFLWVMRPPHKDSGVEPHVLPEEFLE 333 (480)
T ss_pred -cccccccccchhHHHHHhCCCCCceeEEEeccccCCCHHHHHHHHHHHHhcCCeEEEEEecCcccccchhhcCChhhhh
Confidence 11122344556899999999888999999999999999999999999999999999999843111 112357888988
Q ss_pred hhcCCeEEEeecchhhhhcCCCcceEeeccCcchhhhhHhcCCcEEeccCcCCHHHHHHHHHHHhCceEEec-----C-C
Q 022321 159 EIKDRGLIVSWCNQEQVLLHPSVGAFLTHCGWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVN-----H-D 232 (299)
Q Consensus 159 ~~~~n~~v~~~~pq~~iL~~~~v~~fItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~-----~-~ 232 (299)
++++|+++++|+||.+||+|+++++|||||||||++||+++|||||+||+++||+.||+++++.+|+|+.+. . .
T Consensus 334 ~~~~~g~v~~W~PQ~~iL~H~~v~~FvtH~G~nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~l~~~~~~~~~ 413 (480)
T PLN02555 334 KAGDKGKIVQWCPQEKVLAHPSVACFVTHCGWNSTMEALSSGVPVVCFPQWGDQVTDAVYLVDVFKTGVRLCRGEAENKL 413 (480)
T ss_pred hcCCceEEEecCCHHHHhCCCccCeEEecCCcchHHHHHHcCCCEEeCCCccccHHHHHHHHHHhCceEEccCCccccCc
Confidence 889999999999999999999999999999999999999999999999999999999999977789999993 2 5
Q ss_pred CCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhcC
Q 022321 233 VKRGDIEALVKEMMEGDEGKKMRQKAWEWKKKAEAATAVGGQSYNNFDRLVKMVLHQG 290 (299)
Q Consensus 233 ~~~~~l~~av~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gg~s~~~l~~~v~~l~~~~ 290 (299)
+++++|.++|+++|++++|+++|+||++|++++++|+.+||||++++++||+++.+..
T Consensus 414 v~~~~v~~~v~~vm~~~~g~~~r~ra~~l~~~a~~A~~egGSS~~~l~~~v~~i~~~~ 471 (480)
T PLN02555 414 ITREEVAECLLEATVGEKAAELKQNALKWKEEAEAAVAEGGSSDRNFQEFVDKLVRKS 471 (480)
T ss_pred CcHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHhcc
Confidence 8999999999999998889999999999999999999999999999999999998763
No 2
>PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=100.00 E-value=3.6e-57 Score=429.19 Aligned_cols=276 Identities=37% Similarity=0.703 Sum_probs=236.2
Q ss_pred CCCCCCCCCCcccccCCCchhHHHHHHHHHhhccCccEEEEcCcccccHHHHHHHHhcC-CCEEEeCcccCCcccccccc
Q 022321 1 MSNIRLRDLPSFIRTTDPNEIMFDFMGSEAQNCFRSSAIIFNTFDEFEHAALEVIASKF-PNIYTVGPLPLLCKQVDETK 79 (299)
Q Consensus 1 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~LE~~~~~~~r~~~-p~v~~VGpl~~~~~~~~~~~ 79 (299)
+||++.+|+|.+.... .+.+..++.... .+.+++++|+|||+|||+.++++++... +++++|||++.....
T Consensus 172 ~~~~~~~dlp~~~~~~--~~~~~~~~~~~~-~~~~~~~vlvNTf~eLE~~~~~~l~~~~~~~v~~vGpl~~~~~~----- 243 (451)
T PLN02410 172 FHPLRCKDFPVSHWAS--LESIMELYRNTV-DKRTASSVIINTASCLESSSLSRLQQQLQIPVYPIGPLHLVASA----- 243 (451)
T ss_pred CCCCChHHCcchhcCC--cHHHHHHHHHHh-hcccCCEEEEeChHHhhHHHHHHHHhccCCCEEEecccccccCC-----
Confidence 3568888999765422 223444444433 4678999999999999999999998755 589999999854321
Q ss_pred cccCCCCCcccchhhhHhhccCCCCceEEEeecCCcccCHHHHHHHHHHHHcCCCCEEEEEcCCCCCC--CCcCCChhhh
Q 022321 80 FRSFGSSLWKEDTDCLKWLDKRDANSVVYVNYGSVTVMSEQHLTEFAWGLANSKRPFLWILRPDVVMG--DSVVLPDEYF 157 (299)
Q Consensus 80 ~~~l~~~~~~~~~~~~~wl~~~~~~~vVyvsfGS~~~~~~~~~~~l~~al~~~~~~~iw~~~~~~~~~--~~~~l~~~~~ 157 (299)
+.++++++.+|.+|||++++++||||||||...++.+++.+++.+|+.++++|||+++.....+ ....+|++|.
T Consensus 244 ----~~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~~~~~q~~ela~gLe~s~~~FlWv~r~~~~~~~~~~~~lp~~f~ 319 (451)
T PLN02410 244 ----PTSLLEENKSCIEWLNKQKKNSVIFVSLGSLALMEINEVMETASGLDSSNQQFLWVIRPGSVRGSEWIESLPKEFS 319 (451)
T ss_pred ----CccccccchHHHHHHHhCCCCcEEEEEccccccCCHHHHHHHHHHHHhcCCCeEEEEccCcccccchhhcCChhHH
Confidence 1122334457999999998899999999999999999999999999999999999998532111 1124899999
Q ss_pred hhhcCCeEEEeecchhhhhcCCCcceEeeccCcchhhhhHhcCCcEEeccCcCCHHHHHHHHHHHhCceEEecCCCCHHH
Q 022321 158 EEIKDRGLIVSWCNQEQVLLHPSVGAFLTHCGWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVKRGD 237 (299)
Q Consensus 158 ~~~~~n~~v~~~~pq~~iL~~~~v~~fItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~ 237 (299)
+++++|+++++|+||.+||+|+++++|||||||||++||+++|||||+||+++||+.||+++++.+|+|+.+...+++++
T Consensus 320 er~~~~g~v~~w~PQ~~iL~h~~v~~fvtH~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~~~ 399 (451)
T PLN02410 320 KIISGRGYIVKWAPQKEVLSHPAVGGFWSHCGWNSTLESIGEGVPMICKPFSSDQKVNARYLECVWKIGIQVEGDLDRGA 399 (451)
T ss_pred HhccCCeEEEccCCHHHHhCCCccCeeeecCchhHHHHHHHcCCCEEeccccccCHHHHHHHHHHhCeeEEeCCcccHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999667799999977899999
Q ss_pred HHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHh
Q 022321 238 IEALVKEMMEGDEGKKMRQKAWEWKKKAEAATAVGGQSYNNFDRLVKMVLH 288 (299)
Q Consensus 238 l~~av~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gg~s~~~l~~~v~~l~~ 288 (299)
|+++|+++|.++++++||++|+++++.+++|+.+||||+.++++||+.+..
T Consensus 400 v~~av~~lm~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~fv~~~~~ 450 (451)
T PLN02410 400 VERAVKRLMVEEEGEEMRKRAISLKEQLRASVISGGSSHNSLEEFVHFMRT 450 (451)
T ss_pred HHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHh
Confidence 999999999988889999999999999999999999999999999999864
No 3
>PLN02207 UDP-glycosyltransferase
Probab=100.00 E-value=3.9e-57 Score=429.26 Aligned_cols=275 Identities=28% Similarity=0.551 Sum_probs=234.5
Q ss_pred CCCCCCCCCcccccCCCchhHHHHHHHHHhhccCccEEEEcCcccccHHHHHHHHh--cCCCEEEeCcccCCcccccccc
Q 022321 2 SNIRLRDLPSFIRTTDPNEIMFDFMGSEAQNCFRSSAIIFNTFDEFEHAALEVIAS--KFPNIYTVGPLPLLCKQVDETK 79 (299)
Q Consensus 2 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~LE~~~~~~~r~--~~p~v~~VGpl~~~~~~~~~~~ 79 (299)
|+++.+|||+++...+. +..+.+.+..+.+++++|+|||++||+++++.++. ..|++++|||++.....
T Consensus 182 ~~l~~~dlp~~~~~~~~----~~~~~~~~~~~~~~~~vlvNtf~~LE~~~~~~~~~~~~~p~v~~VGPl~~~~~~----- 252 (468)
T PLN02207 182 NPVPANVLPSALFVEDG----YDAYVKLAILFTKANGILVNSSFDIEPYSVNHFLDEQNYPSVYAVGPIFDLKAQ----- 252 (468)
T ss_pred CCCChHHCcchhcCCcc----HHHHHHHHHhcccCCEEEEEchHHHhHHHHHHHHhccCCCcEEEecCCcccccC-----
Confidence 46999999987753332 33455666778999999999999999999999854 56899999999864321
Q ss_pred cccCCC-CCcccchhhhHhhccCCCCceEEEeecCCcccCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCcCCChhhhh
Q 022321 80 FRSFGS-SLWKEDTDCLKWLDKRDANSVVYVNYGSVTVMSEQHLTEFAWGLANSKRPFLWILRPDVVMGDSVVLPDEYFE 158 (299)
Q Consensus 80 ~~~l~~-~~~~~~~~~~~wl~~~~~~~vVyvsfGS~~~~~~~~~~~l~~al~~~~~~~iw~~~~~~~~~~~~~l~~~~~~ 158 (299)
+++. +.+ .+++|.+|||++++++||||||||...++.+++++++.+|+.++++|||+++.... ...+.+|++|.+
T Consensus 253 --~~~~~~~~-~~~~~~~WLd~~~~~sVVyvSfGS~~~~~~~q~~ela~~l~~~~~~flW~~r~~~~-~~~~~lp~~f~e 328 (468)
T PLN02207 253 --PHPEQDLA-RRDELMKWLDDQPEASVVFLCFGSMGRLRGPLVKEIAHGLELCQYRFLWSLRTEEV-TNDDLLPEGFLD 328 (468)
T ss_pred --CCCccccc-hhhHHHHHHhcCCCCcEEEEEeccCcCCCHHHHHHHHHHHHHCCCcEEEEEeCCCc-cccccCCHHHHh
Confidence 1211 111 34579999999988999999999999999999999999999999999999985321 123458899999
Q ss_pred hhcCCeEEEeecchhhhhcCCCcceEeeccCcchhhhhHhcCCcEEeccCcCCHHHHHHHHHHHhCceEEec------C-
Q 022321 159 EIKDRGLIVSWCNQEQVLLHPSVGAFLTHCGWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVN------H- 231 (299)
Q Consensus 159 ~~~~n~~v~~~~pq~~iL~~~~v~~fItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~------~- 231 (299)
++++|+++++|+||.+||+|+++++|||||||||++||+++|||||+||+++||+.||+++++++|+|+.+. .
T Consensus 329 r~~~~g~i~~W~PQ~~IL~H~~vg~FvTH~GwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~~~~~~~~~~~ 408 (468)
T PLN02207 329 RVSGRGMICGWSPQVEILAHKAVGGFVSHCGWNSIVESLWFGVPIVTWPMYAEQQLNAFLMVKELKLAVELKLDYRVHSD 408 (468)
T ss_pred hcCCCeEEEEeCCHHHHhcccccceeeecCccccHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEEecccccccC
Confidence 999999999999999999999999999999999999999999999999999999999998867799999773 1
Q ss_pred -CCCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhcC
Q 022321 232 -DVKRGDIEALVKEMMEGDEGKKMRQKAWEWKKKAEAATAVGGQSYNNFDRLVKMVLHQG 290 (299)
Q Consensus 232 -~~~~~~l~~av~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gg~s~~~l~~~v~~l~~~~ 290 (299)
.++.++|+++|+++|++ ++++||+||+++++.+++|+.+||||++++++||+++..-.
T Consensus 409 ~~v~~e~i~~av~~vm~~-~~~~~r~~a~~l~~~a~~A~~~GGSS~~~l~~~v~~~~~~~ 467 (468)
T PLN02207 409 EIVNANEIETAIRCVMNK-DNNVVRKRVMDISQMIQRATKNGGSSFAAIEKFIHDVIGIK 467 (468)
T ss_pred CcccHHHHHHHHHHHHhc-chHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHhcc
Confidence 36999999999999974 46799999999999999999999999999999999987643
No 4
>PLN02173 UDP-glucosyl transferase family protein
Probab=100.00 E-value=4.5e-56 Score=420.47 Aligned_cols=279 Identities=32% Similarity=0.637 Sum_probs=236.4
Q ss_pred CCCCCCCCCCcccccCCCchhHHHHHHHHHhhccCccEEEEcCcccccHHHHHHHHhcCCCEEEeCcccCCcc--ccccc
Q 022321 1 MSNIRLRDLPSFIRTTDPNEIMFDFMGSEAQNCFRSSAIIFNTFDEFEHAALEVIASKFPNIYTVGPLPLLCK--QVDET 78 (299)
Q Consensus 1 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~LE~~~~~~~r~~~p~v~~VGpl~~~~~--~~~~~ 78 (299)
||+++.+|||++++..+..+.++.++.+.++.+.+++++|+|||+|||++++++++.. ++++.|||+++... .....
T Consensus 159 ~p~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~-~~v~~VGPl~~~~~~~~~~~~ 237 (449)
T PLN02173 159 LPLLELQDLPTFVTPTGSHLAYFEMVLQQFTNFDKADFVLVNSFHDLDLHENELLSKV-CPVLTIGPTVPSMYLDQQIKS 237 (449)
T ss_pred CCCCChhhCChhhcCCCCchHHHHHHHHHHhhhccCCEEEEeCHHHhhHHHHHHHHhc-CCeeEEcccCchhhccccccc
Confidence 4678899999888754445556677778888899999999999999999999999865 46999999974311 00000
Q ss_pred ccccCCCCCc--ccchhhhHhhccCCCCceEEEeecCCcccCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCcCCChhh
Q 022321 79 KFRSFGSSLW--KEDTDCLKWLDKRDANSVVYVNYGSVTVMSEQHLTEFAWGLANSKRPFLWILRPDVVMGDSVVLPDEY 156 (299)
Q Consensus 79 ~~~~l~~~~~--~~~~~~~~wl~~~~~~~vVyvsfGS~~~~~~~~~~~l~~al~~~~~~~iw~~~~~~~~~~~~~l~~~~ 156 (299)
+ .....++| .+++.|.+||+.+++++||||||||...++.+++.+++.+| ++.+|+|+++.. ....+|+++
T Consensus 238 ~-~~~~~~~~~~~~~~~c~~WLd~~~~~svvyvsfGS~~~~~~~~~~ela~gL--s~~~flWvvr~~----~~~~lp~~~ 310 (449)
T PLN02173 238 D-NDYDLNLFDLKEAALCTDWLDKRPQGSVVYIAFGSMAKLSSEQMEEIASAI--SNFSYLWVVRAS----EESKLPPGF 310 (449)
T ss_pred c-ccccccccccccchHHHHHHhcCCCCceEEEEecccccCCHHHHHHHHHHh--cCCCEEEEEecc----chhcccchH
Confidence 0 01111333 23456999999998899999999999999999999999999 778899999853 123478888
Q ss_pred hhhh-cCCeEEEeecchhhhhcCCCcceEeeccCcchhhhhHhcCCcEEeccCcCCHHHHHHHHHHHhCceEEecC----
Q 022321 157 FEEI-KDRGLIVSWCNQEQVLLHPSVGAFLTHCGWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNH---- 231 (299)
Q Consensus 157 ~~~~-~~n~~v~~~~pq~~iL~~~~v~~fItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~---- 231 (299)
.+++ ++|+++++|+||.+||+|+++++|||||||||++||+++|||||+||+++||+.||+++++.+|+|+.+..
T Consensus 311 ~~~~~~~~~~i~~W~PQ~~iL~H~~v~~FvtHcGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~~g~Gv~v~~~~~~ 390 (449)
T PLN02173 311 LETVDKDKSLVLKWSPQLQVLSNKAIGCFMTHCGWNSTMEGLSLGVPMVAMPQWTDQPMNAKYIQDVWKVGVRVKAEKES 390 (449)
T ss_pred HHhhcCCceEEeCCCCHHHHhCCCccceEEecCccchHHHHHHcCCCEEecCchhcchHHHHHHHHHhCceEEEeecccC
Confidence 8887 57899999999999999999999999999999999999999999999999999999999777899999853
Q ss_pred -CCCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHH
Q 022321 232 -DVKRGDIEALVKEMMEGDEGKKMRQKAWEWKKKAEAATAVGGQSYNNFDRLVKMVL 287 (299)
Q Consensus 232 -~~~~~~l~~av~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gg~s~~~l~~~v~~l~ 287 (299)
.++.++|+++|+++|++++|+.+|+||+++++++++|+++||||++++++||+++.
T Consensus 391 ~~~~~e~v~~av~~vm~~~~~~~~r~~a~~~~~~a~~Av~~gGSS~~~l~~~v~~~~ 447 (449)
T PLN02173 391 GIAKREEIEFSIKEVMEGEKSKEMKENAGKWRDLAVKSLSEGGSTDININTFVSKIQ 447 (449)
T ss_pred CcccHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHhc
Confidence 26999999999999998889999999999999999999999999999999999875
No 5
>PLN03015 UDP-glucosyl transferase
Probab=100.00 E-value=1.1e-55 Score=418.33 Aligned_cols=272 Identities=29% Similarity=0.558 Sum_probs=232.4
Q ss_pred CCCCCCCCCCcccccCCCchhHHHHHHHHHhhccCccEEEEcCcccccHHHHHHHHhc-------CCCEEEeCcccCCcc
Q 022321 1 MSNIRLRDLPSFIRTTDPNEIMFDFMGSEAQNCFRSSAIIFNTFDEFEHAALEVIASK-------FPNIYTVGPLPLLCK 73 (299)
Q Consensus 1 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~LE~~~~~~~r~~-------~p~v~~VGpl~~~~~ 73 (299)
||+++.+|||.+++... ...+..+.+.++.+.+++++|+|||+|||+.+++.++.. .+++++|||++....
T Consensus 172 ~p~l~~~dlp~~~~~~~--~~~~~~~~~~~~~~~~a~gvlvNTf~eLE~~~~~~l~~~~~~~~~~~~~v~~VGPl~~~~~ 249 (470)
T PLN03015 172 CKPVGPKELMETMLDRS--DQQYKECVRSGLEVPMSDGVLVNTWEELQGNTLAALREDMELNRVMKVPVYPIGPIVRTNV 249 (470)
T ss_pred CCCCChHHCCHhhcCCC--cHHHHHHHHHHHhcccCCEEEEechHHHhHHHHHHHHhhcccccccCCceEEecCCCCCcc
Confidence 46799999997665433 222344457777889999999999999999999999874 256999999974211
Q ss_pred cccccccccCCCCCcccchhhhHhhccCCCCceEEEeecCCcccCHHHHHHHHHHHHcCCCCEEEEEcCCCC--------
Q 022321 74 QVDETKFRSFGSSLWKEDTDCLKWLDKRDANSVVYVNYGSVTVMSEQHLTEFAWGLANSKRPFLWILRPDVV-------- 145 (299)
Q Consensus 74 ~~~~~~~~~l~~~~~~~~~~~~~wl~~~~~~~vVyvsfGS~~~~~~~~~~~l~~al~~~~~~~iw~~~~~~~-------- 145 (299)
.. ..+++|.+|||++++++||||||||...++.+++.+++.+|+.++++|||+++....
T Consensus 250 ----------~~---~~~~~~~~WLd~~~~~sVvyvsFGS~~~~~~~q~~ela~gl~~s~~~FlWv~r~~~~~~~~~~~~ 316 (470)
T PLN03015 250 ----------HV---EKRNSIFEWLDKQGERSVVYVCLGSGGTLTFEQTVELAWGLELSGQRFVWVLRRPASYLGASSSD 316 (470)
T ss_pred ----------cc---cchHHHHHHHHhCCCCCEEEEECCcCCcCCHHHHHHHHHHHHhCCCcEEEEEecCcccccccccc
Confidence 00 123479999999988999999999999999999999999999999999999974210
Q ss_pred -CCCCcCCChhhhhhhcCCeEE-EeecchhhhhcCCCcceEeeccCcchhhhhHhcCCcEEeccCcCCHHHHHHHHHHHh
Q 022321 146 -MGDSVVLPDEYFEEIKDRGLI-VSWCNQEQVLLHPSVGAFLTHCGWNSTMESICGGVPVICWPFFAEQQTNCRYACTTW 223 (299)
Q Consensus 146 -~~~~~~l~~~~~~~~~~n~~v-~~~~pq~~iL~~~~v~~fItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~ 223 (299)
.+..+.+|++|.+++.+++++ .+|+||.+||+|+++++|||||||||++||+++|||||+||+++||+.||+++++.+
T Consensus 317 ~~~~~~~lp~~f~er~~~rGl~v~~W~PQ~~vL~h~~vg~fvtH~GwnS~~Eai~~GvP~v~~P~~~DQ~~na~~~~~~~ 396 (470)
T PLN03015 317 DDQVSASLPEGFLDRTRGVGLVVTQWAPQVEILSHRSIGGFLSHCGWSSVLESLTKGVPIVAWPLYAEQWMNATLLTEEI 396 (470)
T ss_pred ccchhhcCChHHHHhhccCceEEEecCCHHHHhccCccCeEEecCCchhHHHHHHcCCCEEecccccchHHHHHHHHHHh
Confidence 011235889999999888875 599999999999999999999999999999999999999999999999999998899
Q ss_pred CceEEecC-----CCCHHHHHHHHHHHhcC--ChhHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHH
Q 022321 224 GIGMEVNH-----DVKRGDIEALVKEMMEG--DEGKKMRQKAWEWKKKAEAATAVGGQSYNNFDRLVKMVL 287 (299)
Q Consensus 224 g~G~~l~~-----~~~~~~l~~av~~ll~~--~~~~~~r~~a~~l~~~~~~a~~~gg~s~~~l~~~v~~l~ 287 (299)
|+|+.+.. .+++++|+++|+++|++ ++|+++|+||++|++++++|+++||||++++++|++.+.
T Consensus 397 gvg~~~~~~~~~~~v~~e~i~~~v~~lm~~~~eeg~~~R~ra~~lk~~a~~Av~eGGSS~~nl~~~~~~~~ 467 (470)
T PLN03015 397 GVAVRTSELPSEKVIGREEVASLVRKIVAEEDEEGQKIRAKAEEVRVSSERAWSHGGSSYNSLFEWAKRCY 467 (470)
T ss_pred CeeEEecccccCCccCHHHHHHHHHHHHccCcccHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHhcc
Confidence 99999951 58999999999999963 678999999999999999999999999999999998863
No 6
>PLN02992 coniferyl-alcohol glucosyltransferase
Probab=100.00 E-value=3.1e-55 Score=417.21 Aligned_cols=274 Identities=34% Similarity=0.641 Sum_probs=233.6
Q ss_pred CCCCCCCCCCcccccCCCchhHHHHHHHHHhhccCccEEEEcCcccccHHHHHHHHhc-------CCCEEEeCcccCCcc
Q 022321 1 MSNIRLRDLPSFIRTTDPNEIMFDFMGSEAQNCFRSSAIIFNTFDEFEHAALEVIASK-------FPNIYTVGPLPLLCK 73 (299)
Q Consensus 1 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~LE~~~~~~~r~~-------~p~v~~VGpl~~~~~ 73 (299)
+|+++.+|+|.++... .+..+..+.+.+..+.+++++|+|||++||+.++++++.. .++++.|||++....
T Consensus 168 ~~~l~~~dlp~~~~~~--~~~~~~~~~~~~~~~~~a~gvlvNTf~eLE~~~l~~l~~~~~~~~~~~~~v~~VGPl~~~~~ 245 (481)
T PLN02992 168 CEPVRFEDTLDAYLVP--DEPVYRDFVRHGLAYPKADGILVNTWEEMEPKSLKSLQDPKLLGRVARVPVYPIGPLCRPIQ 245 (481)
T ss_pred CCccCHHHhhHhhcCC--CcHHHHHHHHHHHhcccCCEEEEechHHHhHHHHHHHhhccccccccCCceEEecCccCCcC
Confidence 3568888999655432 2245566677788888999999999999999999998752 256999999974211
Q ss_pred cccccccccCCCCCcccchhhhHhhccCCCCceEEEeecCCcccCHHHHHHHHHHHHcCCCCEEEEEcCCCCC-------
Q 022321 74 QVDETKFRSFGSSLWKEDTDCLKWLDKRDANSVVYVNYGSVTVMSEQHLTEFAWGLANSKRPFLWILRPDVVM------- 146 (299)
Q Consensus 74 ~~~~~~~~~l~~~~~~~~~~~~~wl~~~~~~~vVyvsfGS~~~~~~~~~~~l~~al~~~~~~~iw~~~~~~~~------- 146 (299)
. . .++++|.+|||++++++||||||||...++.+++++++.+|+.++++|||++++....
T Consensus 246 ~-----------~--~~~~~c~~wLd~~~~~sVvyvsfGS~~~l~~~q~~ela~gL~~s~~~flW~~r~~~~~~~~~~~~ 312 (481)
T PLN02992 246 S-----------S--KTDHPVLDWLNKQPNESVLYISFGSGGSLSAKQLTELAWGLEMSQQRFVWVVRPPVDGSACSAYF 312 (481)
T ss_pred C-----------C--cchHHHHHHHHcCCCCceEEEeecccccCCHHHHHHHHHHHHHcCCCEEEEEeCCcccccccccc
Confidence 0 0 1356799999999889999999999999999999999999999999999999742100
Q ss_pred --------C-CCcCCChhhhhhhcCCeEE-EeecchhhhhcCCCcceEeeccCcchhhhhHhcCCcEEeccCcCCHHHHH
Q 022321 147 --------G-DSVVLPDEYFEEIKDRGLI-VSWCNQEQVLLHPSVGAFLTHCGWNSTMESICGGVPVICWPFFAEQQTNC 216 (299)
Q Consensus 147 --------~-~~~~l~~~~~~~~~~n~~v-~~~~pq~~iL~~~~v~~fItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na 216 (299)
. ....+|++|.+++.+++++ .+|+||.+||+|+++++|||||||||++||+++|||||+||+++||+.||
T Consensus 313 ~~~~~~~~~~~~~~lp~~f~eR~~~rg~vv~~W~PQ~~iL~h~~vg~FitH~G~nS~~Eal~~GVP~l~~P~~~DQ~~na 392 (481)
T PLN02992 313 SANGGETRDNTPEYLPEGFVSRTHDRGFVVPSWAPQAEILAHQAVGGFLTHCGWSSTLESVVGGVPMIAWPLFAEQNMNA 392 (481)
T ss_pred cCcccccccchhhhCCHHHHHHhcCCCEEEeecCCHHHHhCCcccCeeEecCchhHHHHHHHcCCCEEecCccchhHHHH
Confidence 0 1235888999999877765 59999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCceEEecC---CCCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHh--cCCchHHHHHHHHHHHHhc
Q 022321 217 RYACTTWGIGMEVNH---DVKRGDIEALVKEMMEGDEGKKMRQKAWEWKKKAEAATA--VGGQSYNNFDRLVKMVLHQ 289 (299)
Q Consensus 217 ~~v~~~~g~G~~l~~---~~~~~~l~~av~~ll~~~~~~~~r~~a~~l~~~~~~a~~--~gg~s~~~l~~~v~~l~~~ 289 (299)
+++++++|+|+.+.. .++.++|+++|+++|++++|+++|++|+++++.+++|+. +||||++++++||+++.+.
T Consensus 393 ~~~~~~~g~gv~~~~~~~~~~~~~l~~av~~vm~~~~g~~~r~~a~~~~~~a~~Av~~~~GGSS~~~l~~~v~~~~~~ 470 (481)
T PLN02992 393 ALLSDELGIAVRSDDPKEVISRSKIEALVRKVMVEEEGEEMRRKVKKLRDTAEMSLSIDGGGVAHESLCRVTKECQRF 470 (481)
T ss_pred HHHHHHhCeeEEecCCCCcccHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHH
Confidence 999668999999964 489999999999999988888999999999999999994 5999999999999998654
No 7
>PLN02152 indole-3-acetate beta-glucosyltransferase
Probab=100.00 E-value=8.4e-55 Score=412.41 Aligned_cols=281 Identities=32% Similarity=0.611 Sum_probs=231.3
Q ss_pred CCCCCCCCCCcccccCCCchhHHHHHHHHHhhccC--ccEEEEcCcccccHHHHHHHHhcCCCEEEeCcccCCccccccc
Q 022321 1 MSNIRLRDLPSFIRTTDPNEIMFDFMGSEAQNCFR--SSAIIFNTFDEFEHAALEVIASKFPNIYTVGPLPLLCKQVDET 78 (299)
Q Consensus 1 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~ns~~~LE~~~~~~~r~~~p~v~~VGpl~~~~~~~~~~ 78 (299)
||+++.+|||++++..+.++.+..++.+.++.+.+ ++++|+|||++||+.++++++.. +++.|||+++........
T Consensus 160 lp~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~l~~~--~v~~VGPL~~~~~~~~~~ 237 (455)
T PLN02152 160 LPSLEIRDLPSFLSPSNTNKAAQAVYQELMEFLKEESNPKILVNTFDSLEPEFLTAIPNI--EMVAVGPLLPAEIFTGSE 237 (455)
T ss_pred CCCCchHHCchhhcCCCCchhHHHHHHHHHHHhhhccCCEEEEeChHHhhHHHHHhhhcC--CEEEEcccCccccccccc
Confidence 46788999999887555555555666677776643 57999999999999999998762 699999997532100000
Q ss_pred ccccCCCCCcccchhhhHhhccCCCCceEEEeecCCcccCHHHHHHHHHHHHcCCCCEEEEEcCCCCC-----CC-C--c
Q 022321 79 KFRSFGSSLWKEDTDCLKWLDKRDANSVVYVNYGSVTVMSEQHLTEFAWGLANSKRPFLWILRPDVVM-----GD-S--V 150 (299)
Q Consensus 79 ~~~~l~~~~~~~~~~~~~wl~~~~~~~vVyvsfGS~~~~~~~~~~~l~~al~~~~~~~iw~~~~~~~~-----~~-~--~ 150 (299)
..-..++++++.+|.+|||++++++||||||||...++.+++++++.+|+.++++|||++++.... .. . .
T Consensus 238 --~~~~~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~l~~~q~~ela~gL~~s~~~flWv~r~~~~~~~~~~~~~~~~~ 315 (455)
T PLN02152 238 --SGKDLSVRDQSSSYTLWLDSKTESSVIYVSFGTMVELSKKQIEELARALIEGKRPFLWVITDKLNREAKIEGEEETEI 315 (455)
T ss_pred --cCccccccccchHHHHHhhCCCCCceEEEEecccccCCHHHHHHHHHHHHHcCCCeEEEEecCccccccccccccccc
Confidence 000011233456899999999889999999999999999999999999999999999999853110 00 0 1
Q ss_pred CCChhhhhhhcCCeEEEeecchhhhhcCCCcceEeeccCcchhhhhHhcCCcEEeccCcCCHHHHHHHHHHHhCceEEec
Q 022321 151 VLPDEYFEEIKDRGLIVSWCNQEQVLLHPSVGAFLTHCGWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVN 230 (299)
Q Consensus 151 ~l~~~~~~~~~~n~~v~~~~pq~~iL~~~~v~~fItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~ 230 (299)
.++++|.+++++|+++++|+||.+||+|+++++|||||||||++||+++|||||+||+++||+.||+++++.+|+|+.+.
T Consensus 316 ~~~~~f~e~~~~~g~v~~W~PQ~~iL~h~~vg~fvtH~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~ 395 (455)
T PLN02152 316 EKIAGFRHELEEVGMIVSWCSQIEVLRHRAVGCFVTHCGWSSSLESLVLGVPVVAFPMWSDQPANAKLLEEIWKTGVRVR 395 (455)
T ss_pred ccchhHHHhccCCeEEEeeCCHHHHhCCcccceEEeeCCcccHHHHHHcCCCEEeccccccchHHHHHHHHHhCceEEee
Confidence 24678888899999999999999999999999999999999999999999999999999999999999966678888875
Q ss_pred C----CCCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHH
Q 022321 231 H----DVKRGDIEALVKEMMEGDEGKKMRQKAWEWKKKAEAATAVGGQSYNNFDRLVKMV 286 (299)
Q Consensus 231 ~----~~~~~~l~~av~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gg~s~~~l~~~v~~l 286 (299)
. .++.++|+++|+++|+++ +++||+||++|++.+++|+.+||+|++++++||+++
T Consensus 396 ~~~~~~~~~e~l~~av~~vm~~~-~~~~r~~a~~~~~~~~~a~~~ggsS~~nl~~li~~i 454 (455)
T PLN02152 396 ENSEGLVERGEIRRCLEAVMEEK-SVELRESAEKWKRLAIEAGGEGGSSDKNVEAFVKTL 454 (455)
T ss_pred cCcCCcCcHHHHHHHHHHHHhhh-HHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHh
Confidence 2 369999999999999854 668999999999999999999999999999999986
No 8
>PLN00164 glucosyltransferase; Provisional
Probab=100.00 E-value=8.9e-55 Score=416.43 Aligned_cols=279 Identities=32% Similarity=0.606 Sum_probs=235.6
Q ss_pred CCCCCCCCCCcccccCCCchhHHHHHHHHHhhccCccEEEEcCcccccHHHHHHHHhc-------CCCEEEeCcccCCcc
Q 022321 1 MSNIRLRDLPSFIRTTDPNEIMFDFMGSEAQNCFRSSAIIFNTFDEFEHAALEVIASK-------FPNIYTVGPLPLLCK 73 (299)
Q Consensus 1 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~LE~~~~~~~r~~-------~p~v~~VGpl~~~~~ 73 (299)
+|+++.+|||++++..+ +....++...++.+.+++++|+|||+|||+.+++.++.. .|+++.|||++....
T Consensus 174 lp~l~~~dlp~~~~~~~--~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~~~~~~~~~~~v~~vGPl~~~~~ 251 (480)
T PLN00164 174 LPPVPASSLPAPVMDKK--SPNYAWFVYHGRRFMEAAGIIVNTAAELEPGVLAAIADGRCTPGRPAPTVYPIGPVISLAF 251 (480)
T ss_pred CCCCChHHCCchhcCCC--cHHHHHHHHHHHhhhhcCEEEEechHHhhHHHHHHHHhccccccCCCCceEEeCCCccccc
Confidence 45689999998776432 233445566677788999999999999999999999864 258999999974321
Q ss_pred cccccccccCCCCCcccchhhhHhhccCCCCceEEEeecCCcccCHHHHHHHHHHHHcCCCCEEEEEcCCCCC-------
Q 022321 74 QVDETKFRSFGSSLWKEDTDCLKWLDKRDANSVVYVNYGSVTVMSEQHLTEFAWGLANSKRPFLWILRPDVVM------- 146 (299)
Q Consensus 74 ~~~~~~~~~l~~~~~~~~~~~~~wl~~~~~~~vVyvsfGS~~~~~~~~~~~l~~al~~~~~~~iw~~~~~~~~------- 146 (299)
.. ..+..+.+|.+|||++++++||||||||...++.+++.+++.+|+.++++|||+++.....
T Consensus 252 ~~----------~~~~~~~~~~~wLd~~~~~svvyvsfGS~~~~~~~q~~ela~gL~~s~~~flWv~~~~~~~~~~~~~~ 321 (480)
T PLN00164 252 TP----------PAEQPPHECVRWLDAQPPASVVFLCFGSMGFFDAPQVREIAAGLERSGHRFLWVLRGPPAAGSRHPTD 321 (480)
T ss_pred cC----------CCccchHHHHHHHHhCCCCceEEEEecccccCCHHHHHHHHHHHHHcCCCEEEEEcCCcccccccccc
Confidence 10 0112456799999999889999999999988999999999999999999999999853210
Q ss_pred -CCCcCCChhhhhhhcCCeEEE-eecchhhhhcCCCcceEeeccCcchhhhhHhcCCcEEeccCcCCHHHHHHHHHHHhC
Q 022321 147 -GDSVVLPDEYFEEIKDRGLIV-SWCNQEQVLLHPSVGAFLTHCGWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWG 224 (299)
Q Consensus 147 -~~~~~l~~~~~~~~~~n~~v~-~~~pq~~iL~~~~v~~fItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g 224 (299)
+....+|++|.+++.++++++ +|+||.+||+|+++++|||||||||++||+++|||||+||+++||+.||+++++++|
T Consensus 322 ~~~~~~lp~~~~~~~~~~g~~v~~w~PQ~~iL~h~~vg~fvtH~GwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~g 401 (480)
T PLN00164 322 ADLDELLPEGFLERTKGRGLVWPTWAPQKEILAHAAVGGFVTHCGWNSVLESLWHGVPMAPWPLYAEQHLNAFELVADMG 401 (480)
T ss_pred cchhhhCChHHHHHhcCCCeEEeecCCHHHHhcCcccCeEEeecccchHHHHHHcCCCEEeCCccccchhHHHHHHHHhC
Confidence 112247889988888887766 999999999999999999999999999999999999999999999999998867899
Q ss_pred ceEEecC------CCCHHHHHHHHHHHhcCC--hhHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhcCC
Q 022321 225 IGMEVNH------DVKRGDIEALVKEMMEGD--EGKKMRQKAWEWKKKAEAATAVGGQSYNNFDRLVKMVLHQGN 291 (299)
Q Consensus 225 ~G~~l~~------~~~~~~l~~av~~ll~~~--~~~~~r~~a~~l~~~~~~a~~~gg~s~~~l~~~v~~l~~~~~ 291 (299)
+|+.+.. .+++++|+++|+++|.++ +++.+|++|+++++.+++|+.+||||++++++||+++....-
T Consensus 402 vG~~~~~~~~~~~~~~~e~l~~av~~vm~~~~~~~~~~r~~a~~~~~~~~~a~~~gGSS~~~l~~~v~~~~~~~~ 476 (480)
T PLN00164 402 VAVAMKVDRKRDNFVEAAELERAVRSLMGGGEEEGRKAREKAAEMKAACRKAVEEGGSSYAALQRLAREIRHGAV 476 (480)
T ss_pred eEEEeccccccCCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHhccC
Confidence 9999852 379999999999999875 478999999999999999999999999999999999987643
No 9
>PLN02562 UDP-glycosyltransferase
Probab=100.00 E-value=9.2e-55 Score=413.35 Aligned_cols=272 Identities=31% Similarity=0.587 Sum_probs=231.2
Q ss_pred CCCCCCCCCCcccccCCCchhHHHHHHHHHhhccCccEEEEcCcccccHHHHHHHH-----hcCCCEEEeCcccCCcccc
Q 022321 1 MSNIRLRDLPSFIRTTDPNEIMFDFMGSEAQNCFRSSAIIFNTFDEFEHAALEVIA-----SKFPNIYTVGPLPLLCKQV 75 (299)
Q Consensus 1 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~LE~~~~~~~r-----~~~p~v~~VGpl~~~~~~~ 75 (299)
+|+++.+|+|++++........+..+.+.++.+.+++++++|||+|||+.+++..+ +..|++++|||++......
T Consensus 171 ~~~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~~~~~~~~~v~~iGpl~~~~~~~ 250 (448)
T PLN02562 171 QPLLSTEDLPWLIGTPKARKARFKFWTRTLERTKSLRWILMNSFKDEEYDDVKNHQASYNNGQNPQILQIGPLHNQEATT 250 (448)
T ss_pred CCCCChhhCcchhcCCCcchHHHHHHHHHHhccccCCEEEEcChhhhCHHHHHHHHhhhccccCCCEEEecCcccccccc
Confidence 35688999998776443333456777888888899999999999999999998765 3457899999998643210
Q ss_pred cccccccCCCCCcccchhhhHhhccCCCCceEEEeecCCc-ccCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCcCCCh
Q 022321 76 DETKFRSFGSSLWKEDTDCLKWLDKRDANSVVYVNYGSVT-VMSEQHLTEFAWGLANSKRPFLWILRPDVVMGDSVVLPD 154 (299)
Q Consensus 76 ~~~~~~~l~~~~~~~~~~~~~wl~~~~~~~vVyvsfGS~~-~~~~~~~~~l~~al~~~~~~~iw~~~~~~~~~~~~~l~~ 154 (299)
.-..+++..+.+|.+|||++++++||||||||+. .++.+++++++.+|+.++++|||+++... ...+|+
T Consensus 251 ------~~~~~~~~~~~~c~~wLd~~~~~svvyvsfGS~~~~~~~~~~~~l~~~l~~~g~~fiW~~~~~~----~~~l~~ 320 (448)
T PLN02562 251 ------ITKPSFWEEDMSCLGWLQEQKPNSVIYISFGSWVSPIGESNVRTLALALEASGRPFIWVLNPVW----REGLPP 320 (448)
T ss_pred ------cCCCccccchHHHHHHHhcCCCCceEEEEecccccCCCHHHHHHHHHHHHHCCCCEEEEEcCCc----hhhCCH
Confidence 0011223345679999999988899999999985 67899999999999999999999997531 224788
Q ss_pred hhhhhhcCCeEEEeecchhhhhcCCCcceEeeccCcchhhhhHhcCCcEEeccCcCCHHHHHHHHHHHhCceEEecCCCC
Q 022321 155 EYFEEIKDRGLIVSWCNQEQVLLHPSVGAFLTHCGWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVK 234 (299)
Q Consensus 155 ~~~~~~~~n~~v~~~~pq~~iL~~~~v~~fItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~ 234 (299)
+|.+++++|+++++|+||.+||+|+++++|||||||||++||+++|||||+||+++||+.||+++++.+|+|+.+. +++
T Consensus 321 ~~~~~~~~~~~v~~w~PQ~~iL~h~~v~~fvtH~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~-~~~ 399 (448)
T PLN02562 321 GYVERVSKQGKVVSWAPQLEVLKHQAVGCYLTHCGWNSTMEAIQCQKRLLCYPVAGDQFVNCAYIVDVWKIGVRIS-GFG 399 (448)
T ss_pred HHHHHhccCEEEEecCCHHHHhCCCccceEEecCcchhHHHHHHcCCCEEeCCcccchHHHHHHHHHHhCceeEeC-CCC
Confidence 8888899999999999999999999999999999999999999999999999999999999999955689999986 689
Q ss_pred HHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHH
Q 022321 235 RGDIEALVKEMMEGDEGKKMRQKAWEWKKKAEAATAVGGQSYNNFDRLVKMVL 287 (299)
Q Consensus 235 ~~~l~~av~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gg~s~~~l~~~v~~l~ 287 (299)
.++|+++|+++|+|+ +||+||+++++.++++ .+||||++++++||++++
T Consensus 400 ~~~l~~~v~~~l~~~---~~r~~a~~l~~~~~~~-~~gGSS~~nl~~~v~~~~ 448 (448)
T PLN02562 400 QKEVEEGLRKVMEDS---GMGERLMKLRERAMGE-EARLRSMMNFTTLKDELK 448 (448)
T ss_pred HHHHHHHHHHHhCCH---HHHHHHHHHHHHHHhc-CCCCCHHHHHHHHHHHhC
Confidence 999999999999887 8999999999999877 667999999999999863
No 10
>PLN02210 UDP-glucosyl transferase
Probab=100.00 E-value=2.8e-54 Score=410.55 Aligned_cols=281 Identities=30% Similarity=0.566 Sum_probs=230.2
Q ss_pred CCCCCCCCCCcccccCCCchhHHHHHHHHHhhccCccEEEEcCcccccHHHHHHHHhcCCCEEEeCcccCCcc--ccccc
Q 022321 1 MSNIRLRDLPSFIRTTDPNEIMFDFMGSEAQNCFRSSAIIFNTFDEFEHAALEVIASKFPNIYTVGPLPLLCK--QVDET 78 (299)
Q Consensus 1 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~LE~~~~~~~r~~~p~v~~VGpl~~~~~--~~~~~ 78 (299)
+|+++.+|||++++.... ..+..++.+......+++++++|||++||+++++.++.. +++++|||++.... .....
T Consensus 166 l~~~~~~dl~~~~~~~~~-~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~l~~~-~~v~~VGPl~~~~~~~~~~~~ 243 (456)
T PLN02210 166 LPLLEVRDLPSFMLPSGG-AHFNNLMAEFADCLRYVKWVLVNSFYELESEIIESMADL-KPVIPIGPLVSPFLLGDDEEE 243 (456)
T ss_pred CCCCChhhCChhhhcCCc-hHHHHHHHHHHHhcccCCEEEEeCHHHHhHHHHHHHhhc-CCEEEEcccCchhhcCccccc
Confidence 356888999987764322 223333334445667889999999999999999998874 68999999974210 00000
Q ss_pred ccccCCCCCcccchhhhHhhccCCCCceEEEeecCCcccCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCcCCChhhhh
Q 022321 79 KFRSFGSSLWKEDTDCLKWLDKRDANSVVYVNYGSVTVMSEQHLTEFAWGLANSKRPFLWILRPDVVMGDSVVLPDEYFE 158 (299)
Q Consensus 79 ~~~~l~~~~~~~~~~~~~wl~~~~~~~vVyvsfGS~~~~~~~~~~~l~~al~~~~~~~iw~~~~~~~~~~~~~l~~~~~~ 158 (299)
.......++|..+++|.+|||++++++||||||||....+.+++++++.+|+.++++|||+++.... ...+..+.+
T Consensus 244 ~~~~~~~~~~~~~~~~~~wld~~~~~svvyvsfGS~~~~~~~~~~e~a~~l~~~~~~flw~~~~~~~----~~~~~~~~~ 319 (456)
T PLN02210 244 TLDGKNLDMCKSDDCCMEWLDKQARSSVVYISFGSMLESLENQVETIAKALKNRGVPFLWVIRPKEK----AQNVQVLQE 319 (456)
T ss_pred ccccccccccccchHHHHHHhCCCCCceEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEEeCCcc----ccchhhHHh
Confidence 0001112355667789999999988999999999998889999999999999999999999985311 112344555
Q ss_pred hh-cCCeEEEeecchhhhhcCCCcceEeeccCcchhhhhHhcCCcEEeccCcCCHHHHHHHHHHHhCceEEecC-----C
Q 022321 159 EI-KDRGLIVSWCNQEQVLLHPSVGAFLTHCGWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNH-----D 232 (299)
Q Consensus 159 ~~-~~n~~v~~~~pq~~iL~~~~v~~fItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~-----~ 232 (299)
+. ++++++++|+||.+||+|+++++|||||||||++||+++|||||+||+++||+.||+++++.+|+|+.+.. .
T Consensus 320 ~~~~~~g~v~~w~PQ~~iL~h~~vg~FitH~G~nS~~Eai~~GVP~v~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~~~ 399 (456)
T PLN02210 320 MVKEGQGVVLEWSPQEKILSHMAISCFVTHCGWNSTIETVVAGVPVVAYPSWTDQPIDARLLVDVFGIGVRMRNDAVDGE 399 (456)
T ss_pred hccCCCeEEEecCCHHHHhcCcCcCeEEeeCCcccHHHHHHcCCCEEecccccccHHHHHHHHHHhCeEEEEeccccCCc
Confidence 55 48888999999999999999999999999999999999999999999999999999999555999999953 4
Q ss_pred CCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHH
Q 022321 233 VKRGDIEALVKEMMEGDEGKKMRQKAWEWKKKAEAATAVGGQSYNNFDRLVKMVL 287 (299)
Q Consensus 233 ~~~~~l~~av~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gg~s~~~l~~~v~~l~ 287 (299)
+++++|+++|+++|++++|+++|+||++|++.+++|+++||||++++++||+++.
T Consensus 400 ~~~~~l~~av~~~m~~~~g~~~r~~a~~l~~~a~~Av~~gGSS~~~l~~~v~~~~ 454 (456)
T PLN02210 400 LKVEEVERCIEAVTEGPAAADIRRRAAELKHVARLALAPGGSSARNLDLFISDIT 454 (456)
T ss_pred CCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHh
Confidence 8999999999999998889999999999999999999999999999999999875
No 11
>PLN02167 UDP-glycosyltransferase family protein
Probab=100.00 E-value=4.9e-54 Score=411.62 Aligned_cols=275 Identities=28% Similarity=0.564 Sum_probs=231.5
Q ss_pred CCCCCCCCcccccCCCchhHHHHHHHHHhhccCccEEEEcCcccccHHHHHHHHhc---CCCEEEeCcccCCcccccccc
Q 022321 3 NIRLRDLPSFIRTTDPNEIMFDFMGSEAQNCFRSSAIIFNTFDEFEHAALEVIASK---FPNIYTVGPLPLLCKQVDETK 79 (299)
Q Consensus 3 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~LE~~~~~~~r~~---~p~v~~VGpl~~~~~~~~~~~ 79 (299)
+++.+|+|.+++.... ...+.+.++.+.+++++|+|||++||++++++++.. .|++++|||+++......
T Consensus 187 ~l~~~dlp~~~~~~~~----~~~~~~~~~~~~~a~~vlvNTf~eLE~~~~~~l~~~~~~~p~v~~vGpl~~~~~~~~--- 259 (475)
T PLN02167 187 SVPTKVLPPGLFMKES----YEAWVEIAERFPEAKGILVNSFTELEPNAFDYFSRLPENYPPVYPVGPILSLKDRTS--- 259 (475)
T ss_pred CCChhhCchhhhCcch----HHHHHHHHHhhcccCEeeeccHHHHHHHHHHHHHhhcccCCeeEEeccccccccccC---
Confidence 4788888876654321 345556677788999999999999999999998764 478999999986432100
Q ss_pred cccCCCCCcccchhhhHhhccCCCCceEEEeecCCcccCHHHHHHHHHHHHcCCCCEEEEEcCCCCC--CCCcCCChhhh
Q 022321 80 FRSFGSSLWKEDTDCLKWLDKRDANSVVYVNYGSVTVMSEQHLTEFAWGLANSKRPFLWILRPDVVM--GDSVVLPDEYF 157 (299)
Q Consensus 80 ~~~l~~~~~~~~~~~~~wl~~~~~~~vVyvsfGS~~~~~~~~~~~l~~al~~~~~~~iw~~~~~~~~--~~~~~l~~~~~ 157 (299)
..++. ..+.+|.+|||.+++++||||||||+..++.+++.+++.+|+.++++|||+++..... .....+|++|.
T Consensus 260 -~~~~~---~~~~~~~~wld~~~~~svvyvsfGS~~~~~~~~~~ela~~l~~~~~~flw~~~~~~~~~~~~~~~lp~~~~ 335 (475)
T PLN02167 260 -PNLDS---SDRDRIMRWLDDQPESSVVFLCFGSLGSLPAPQIKEIAQALELVGCRFLWSIRTNPAEYASPYEPLPEGFM 335 (475)
T ss_pred -CCCCc---chhHHHHHHHhcCCCCceEEEeecccccCCHHHHHHHHHHHHhCCCcEEEEEecCcccccchhhhCChHHH
Confidence 01111 1335799999999889999999999988999999999999999999999999853210 11235888999
Q ss_pred hhhcCCeEEEeecchhhhhcCCCcceEeeccCcchhhhhHhcCCcEEeccCcCCHHHHHHHHHHHhCceEEecC------
Q 022321 158 EEIKDRGLIVSWCNQEQVLLHPSVGAFLTHCGWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNH------ 231 (299)
Q Consensus 158 ~~~~~n~~v~~~~pq~~iL~~~~v~~fItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~------ 231 (299)
+++.+++++++|+||.+||+|+++++|||||||||++||+++|||||+||+++||+.||+++++++|+|+.+..
T Consensus 336 er~~~rg~v~~w~PQ~~iL~h~~vg~fvtH~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~ 415 (475)
T PLN02167 336 DRVMGRGLVCGWAPQVEILAHKAIGGFVSHCGWNSVLESLWFGVPIATWPMYAEQQLNAFTMVKELGLAVELRLDYVSAY 415 (475)
T ss_pred HHhccCeeeeccCCHHHHhcCcccCeEEeeCCcccHHHHHHcCCCEEeccccccchhhHHHHHHHhCeeEEeeccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999875589999999852
Q ss_pred --CCCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhcC
Q 022321 232 --DVKRGDIEALVKEMMEGDEGKKMRQKAWEWKKKAEAATAVGGQSYNNFDRLVKMVLHQG 290 (299)
Q Consensus 232 --~~~~~~l~~av~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gg~s~~~l~~~v~~l~~~~ 290 (299)
.+++++|+++|+++|.++ ++||+||+++++.+++|+.+||||+.++++||+++...+
T Consensus 416 ~~~~~~~~l~~av~~~m~~~--~~~r~~a~~~~~~~~~av~~gGsS~~~l~~~v~~i~~~~ 474 (475)
T PLN02167 416 GEIVKADEIAGAVRSLMDGE--DVPRKKVKEIAEAARKAVMDGGSSFVAVKRFIDDLLGDH 474 (475)
T ss_pred CCcccHHHHHHHHHHHhcCC--HHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhcC
Confidence 369999999999999764 389999999999999999999999999999999998764
No 12
>PLN02554 UDP-glycosyltransferase family protein
Probab=100.00 E-value=6.6e-54 Score=411.32 Aligned_cols=273 Identities=31% Similarity=0.566 Sum_probs=230.3
Q ss_pred CCCCCCCCcccccCCCchhHHHHHHHHHhhccCccEEEEcCcccccHHHHHHHHh---cCCCEEEeCcccCCcccccccc
Q 022321 3 NIRLRDLPSFIRTTDPNEIMFDFMGSEAQNCFRSSAIIFNTFDEFEHAALEVIAS---KFPNIYTVGPLPLLCKQVDETK 79 (299)
Q Consensus 3 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~LE~~~~~~~r~---~~p~v~~VGpl~~~~~~~~~~~ 79 (299)
|++.+|||+++.. +.++.++.+....+.+++++++|||++||+.+.+.++. ..|++++|||++......
T Consensus 182 pl~~~dlp~~~~~----~~~~~~~~~~~~~~~~~~gvlvNt~~eLe~~~~~~l~~~~~~~~~v~~vGpl~~~~~~~---- 253 (481)
T PLN02554 182 PYPVKCLPSVLLS----KEWLPLFLAQARRFREMKGILVNTVAELEPQALKFFSGSSGDLPPVYPVGPVLHLENSG---- 253 (481)
T ss_pred CCCHHHCCCcccC----HHHHHHHHHHHHhcccCCEEEEechHHHhHHHHHHHHhcccCCCCEEEeCCCccccccc----
Confidence 6788899976652 23456777778888999999999999999999998875 457899999994322110
Q ss_pred cccCCCCCcccchhhhHhhccCCCCceEEEeecCCcccCHHHHHHHHHHHHcCCCCEEEEEcCCCC----------CCCC
Q 022321 80 FRSFGSSLWKEDTDCLKWLDKRDANSVVYVNYGSVTVMSEQHLTEFAWGLANSKRPFLWILRPDVV----------MGDS 149 (299)
Q Consensus 80 ~~~l~~~~~~~~~~~~~wl~~~~~~~vVyvsfGS~~~~~~~~~~~l~~al~~~~~~~iw~~~~~~~----------~~~~ 149 (299)
. ..+ ...+++|.+|||++++++||||||||+..++.+++.+++.+|+.++++|||+++.... .+..
T Consensus 254 --~-~~~-~~~~~~~~~wLd~~~~~svvyvsfGS~~~~~~~~~~~la~~l~~~~~~flW~~~~~~~~~~~~~~~~~~~~~ 329 (481)
T PLN02554 254 --D-DSK-DEKQSEILRWLDEQPPKSVVFLCFGSMGGFSEEQAREIAIALERSGHRFLWSLRRASPNIMKEPPGEFTNLE 329 (481)
T ss_pred --c-ccc-cccchHHHHHHhcCCCCcEEEEeccccccCCHHHHHHHHHHHHHcCCCeEEEEcCCcccccccccccccchh
Confidence 0 000 0123579999999988899999999998899999999999999999999999985210 0011
Q ss_pred cCCChhhhhhhcCCeEEEeecchhhhhcCCCcceEeeccCcchhhhhHhcCCcEEeccCcCCHHHHHHHHHHHhCceEEe
Q 022321 150 VVLPDEYFEEIKDRGLIVSWCNQEQVLLHPSVGAFLTHCGWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEV 229 (299)
Q Consensus 150 ~~l~~~~~~~~~~n~~v~~~~pq~~iL~~~~v~~fItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l 229 (299)
..+|++|.+++++|+++++|+||.+||+|+++++|||||||||++||+++|||||+||+++||+.||+++++++|+|+.+
T Consensus 330 ~~lp~~~~~r~~~~g~v~~W~PQ~~iL~H~~v~~FvtH~G~nS~~Ea~~~GVP~l~~P~~~DQ~~Na~~~v~~~g~Gv~l 409 (481)
T PLN02554 330 EILPEGFLDRTKDIGKVIGWAPQVAVLAKPAIGGFVTHCGWNSILESLWFGVPMAAWPLYAEQKFNAFEMVEELGLAVEI 409 (481)
T ss_pred hhCChHHHHHhccCceEEeeCCHHHHhCCcccCcccccCccchHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEe
Confidence 23688998899999999999999999999999999999999999999999999999999999999996654999999998
Q ss_pred cC------------CCCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhc
Q 022321 230 NH------------DVKRGDIEALVKEMMEGDEGKKMRQKAWEWKKKAEAATAVGGQSYNNFDRLVKMVLHQ 289 (299)
Q Consensus 230 ~~------------~~~~~~l~~av~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gg~s~~~l~~~v~~l~~~ 289 (299)
.. .+++++|+++|+++|+++ ++||+||+++++.+++|+++||||++++++||+++.+.
T Consensus 410 ~~~~~~~~~~~~~~~~~~e~l~~av~~vm~~~--~~~r~~a~~l~~~~~~av~~gGss~~~l~~lv~~~~~~ 479 (481)
T PLN02554 410 RKYWRGDLLAGEMETVTAEEIERGIRCLMEQD--SDVRKRVKEMSEKCHVALMDGGSSHTALKKFIQDVTKN 479 (481)
T ss_pred eccccccccccccCeEcHHHHHHHHHHHhcCC--HHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHhh
Confidence 52 579999999999999732 38999999999999999999999999999999999864
No 13
>PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=100.00 E-value=1.5e-53 Score=407.07 Aligned_cols=286 Identities=27% Similarity=0.499 Sum_probs=233.6
Q ss_pred CCCCCCCCCCcccccCCCchhHHHHHHHHHhhccCccEEEEcCcccccHHHHHHHHhcC--CCEEEeCcccCCccccccc
Q 022321 1 MSNIRLRDLPSFIRTTDPNEIMFDFMGSEAQNCFRSSAIIFNTFDEFEHAALEVIASKF--PNIYTVGPLPLLCKQVDET 78 (299)
Q Consensus 1 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~LE~~~~~~~r~~~--p~v~~VGpl~~~~~~~~~~ 78 (299)
||+++.+|||.+++.....+.+..++.+.+.....++++|+|||++||+.++++++... +++++|||++.........
T Consensus 180 ~~~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~~~~~~v~~IGPL~~~~~~~~~~ 259 (477)
T PLN02863 180 CPKYPWWQISSLYRSYVEGDPAWEFIKDSFRANIASWGLVVNSFTELEGIYLEHLKKELGHDRVWAVGPILPLSGEKSGL 259 (477)
T ss_pred CCCcChHhCchhhhccCccchHHHHHHHHHhhhccCCEEEEecHHHHHHHHHHHHHhhcCCCCeEEeCCCcccccccccc
Confidence 35688999998877543344566677777776778899999999999999999998754 6899999997532100000
Q ss_pred ccccCCCCCcccchhhhHhhccCCCCceEEEeecCCcccCHHHHHHHHHHHHcCCCCEEEEEcCCCCC-CCCcCCChhhh
Q 022321 79 KFRSFGSSLWKEDTDCLKWLDKRDANSVVYVNYGSVTVMSEQHLTEFAWGLANSKRPFLWILRPDVVM-GDSVVLPDEYF 157 (299)
Q Consensus 79 ~~~~l~~~~~~~~~~~~~wl~~~~~~~vVyvsfGS~~~~~~~~~~~l~~al~~~~~~~iw~~~~~~~~-~~~~~l~~~~~ 157 (299)
. ....+.+..+++|.+|||.+++++||||||||+..++.+++.+++.+|+.++++|||+++..... .....+|.+|.
T Consensus 260 ~--~~~~~~~~~~~~~~~WLd~~~~~svVyvsfGS~~~~~~~~~~ela~gL~~~~~~flw~~~~~~~~~~~~~~lp~~~~ 337 (477)
T PLN02863 260 M--ERGGPSSVSVDDVMTWLDTCEDHKVVYVCFGSQVVLTKEQMEALASGLEKSGVHFIWCVKEPVNEESDYSNIPSGFE 337 (477)
T ss_pred c--ccCCcccccHHHHHHHHhcCCCCceEEEEeeceecCCHHHHHHHHHHHHhCCCcEEEEECCCcccccchhhCCHHHH
Confidence 0 00111111346799999999889999999999998999999999999999999999999853211 11235788888
Q ss_pred hhhcCCe-EEEeecchhhhhcCCCcceEeeccCcchhhhhHhcCCcEEeccCcCCHHHHHHHHHHHhCceEEecC----C
Q 022321 158 EEIKDRG-LIVSWCNQEQVLLHPSVGAFLTHCGWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNH----D 232 (299)
Q Consensus 158 ~~~~~n~-~v~~~~pq~~iL~~~~v~~fItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~----~ 232 (299)
+++.++. ++.+|+||.+||+|+++++|||||||||++||+++|||||+||+++||+.||+++++++|+|+++.. .
T Consensus 338 ~r~~~~g~~v~~w~PQ~~vL~h~~v~~fvtH~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~~gvG~~~~~~~~~~ 417 (477)
T PLN02863 338 DRVAGRGLVIRGWAPQVAILSHRAVGAFLTHCGWNSVLEGLVAGVPMLAWPMAADQFVNASLLVDELKVAVRVCEGADTV 417 (477)
T ss_pred HHhccCCEEecCCCCHHHHhcCCCcCeEEecCCchHHHHHHHcCCCEEeCCccccchhhHHHHHHhhceeEEeccCCCCC
Confidence 7775544 5569999999999999999999999999999999999999999999999999998678999999943 3
Q ss_pred CCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhcC
Q 022321 233 VKRGDIEALVKEMMEGDEGKKMRQKAWEWKKKAEAATAVGGQSYNNFDRLVKMVLHQG 290 (299)
Q Consensus 233 ~~~~~l~~av~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gg~s~~~l~~~v~~l~~~~ 290 (299)
++.+++.++|+++|.+ +++||+||+++++.+++|+.+||||++++++||+++....
T Consensus 418 ~~~~~v~~~v~~~m~~--~~~~r~~a~~l~e~a~~Av~~gGSS~~~l~~~v~~i~~~~ 473 (477)
T PLN02863 418 PDSDELARVFMESVSE--NQVERERAKELRRAALDAIKERGSSVKDLDGFVKHVVELG 473 (477)
T ss_pred cCHHHHHHHHHHHhhc--cHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHhc
Confidence 6899999999999952 3599999999999999999999999999999999997653
No 14
>PLN03004 UDP-glycosyltransferase
Probab=100.00 E-value=1.4e-53 Score=403.61 Aligned_cols=263 Identities=33% Similarity=0.629 Sum_probs=221.7
Q ss_pred CCCCCCCCCCcccccCCCchhHHHHHHHHHhhccCccEEEEcCcccccHHHHHHHHhc--CCCEEEeCcccCCccccccc
Q 022321 1 MSNIRLRDLPSFIRTTDPNEIMFDFMGSEAQNCFRSSAIIFNTFDEFEHAALEVIASK--FPNIYTVGPLPLLCKQVDET 78 (299)
Q Consensus 1 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~LE~~~~~~~r~~--~p~v~~VGpl~~~~~~~~~~ 78 (299)
+|+++.+|||++++..+ +..+.++.+....+.+++++|+|||++||+.+++.++.. .++++.||||+......
T Consensus 176 ~p~l~~~dlp~~~~~~~--~~~~~~~~~~~~~~~~~~~vl~NTf~eLE~~~l~~l~~~~~~~~v~~vGPl~~~~~~~--- 250 (451)
T PLN03004 176 VPPMKGSDMPKAVLERD--DEVYDVFIMFGKQLSKSSGIIINTFDALENRAIKAITEELCFRNIYPIGPLIVNGRIE--- 250 (451)
T ss_pred CCCCChHHCchhhcCCc--hHHHHHHHHHHHhhcccCeeeeeeHHHhHHHHHHHHHhcCCCCCEEEEeeeccCcccc---
Confidence 46788999998876433 234566777778888999999999999999999999875 25899999997422100
Q ss_pred ccccCCCCCcccchhhhHhhccCCCCceEEEeecCCcccCHHHHHHHHHHHHcCCCCEEEEEcCCCCC-----CCCcCCC
Q 022321 79 KFRSFGSSLWKEDTDCLKWLDKRDANSVVYVNYGSVTVMSEQHLTEFAWGLANSKRPFLWILRPDVVM-----GDSVVLP 153 (299)
Q Consensus 79 ~~~~l~~~~~~~~~~~~~wl~~~~~~~vVyvsfGS~~~~~~~~~~~l~~al~~~~~~~iw~~~~~~~~-----~~~~~l~ 153 (299)
. . .. ..+.+|.+|||++++++||||||||...++.+++++|+.+|+.++++|||+++..... .....+|
T Consensus 251 ---~-~-~~-~~~~~c~~wLd~~~~~sVvyvsfGS~~~~~~~q~~ela~gL~~s~~~FlW~~r~~~~~~~~~~~~~~~lp 324 (451)
T PLN03004 251 ---D-R-ND-NKAVSCLNWLDSQPEKSVVFLCFGSLGLFSKEQVIEIAVGLEKSGQRFLWVVRNPPELEKTELDLKSLLP 324 (451)
T ss_pred ---c-c-cc-chhhHHHHHHHhCCCCceEEEEecccccCCHHHHHHHHHHHHHCCCCEEEEEcCCccccccccchhhhCC
Confidence 0 0 01 1345799999999889999999999999999999999999999999999999953110 0112378
Q ss_pred hhhhhhhcCCe-EEEeecchhhhhcCCCcceEeeccCcchhhhhHhcCCcEEeccCcCCHHHHHHHHHHHhCceEEecC-
Q 022321 154 DEYFEEIKDRG-LIVSWCNQEQVLLHPSVGAFLTHCGWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNH- 231 (299)
Q Consensus 154 ~~~~~~~~~n~-~v~~~~pq~~iL~~~~v~~fItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~- 231 (299)
++|.+++.++. ++.+|+||.+||+|+++++|||||||||++||+++|||||+||+++||+.||+++++++|+|+.+..
T Consensus 325 ~gf~er~~~~g~~v~~W~PQ~~iL~H~~v~~FvTH~G~nS~lEal~~GVP~v~~P~~~DQ~~na~~~~~~~g~g~~l~~~ 404 (451)
T PLN03004 325 EGFLSRTEDKGMVVKSWAPQVPVLNHKAVGGFVTHCGWNSILEAVCAGVPMVAWPLYAEQRFNRVMIVDEIKIAISMNES 404 (451)
T ss_pred hHHHHhccCCcEEEEeeCCHHHHhCCCccceEeccCcchHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEecCC
Confidence 89999987655 5669999999999999999999999999999999999999999999999999999567899999964
Q ss_pred ---CCCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHhcCCchHH
Q 022321 232 ---DVKRGDIEALVKEMMEGDEGKKMRQKAWEWKKKAEAATAVGGQSYN 277 (299)
Q Consensus 232 ---~~~~~~l~~av~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gg~s~~ 277 (299)
.+++++|+++|+++|+++ +||++|+++++++++|+++||||++
T Consensus 405 ~~~~~~~e~l~~av~~vm~~~---~~r~~a~~~~~~a~~Av~~GGSS~~ 450 (451)
T PLN03004 405 ETGFVSSTEVEKRVQEIIGEC---PVRERTMAMKNAAELALTETGSSHT 450 (451)
T ss_pred cCCccCHHHHHHHHHHHhcCH---HHHHHHHHHHHHHHHHhcCCCCCCC
Confidence 479999999999999886 8999999999999999999999864
No 15
>PLN02764 glycosyltransferase family protein
Probab=100.00 E-value=1.3e-52 Score=396.23 Aligned_cols=272 Identities=21% Similarity=0.399 Sum_probs=228.5
Q ss_pred CCCCCCCcccc--cCCCchhHHHHHHHHHhhccCccEEEEcCcccccHHHHHHHHhcC-CCEEEeCcccCCccccccccc
Q 022321 4 IRLRDLPSFIR--TTDPNEIMFDFMGSEAQNCFRSSAIIFNTFDEFEHAALEVIASKF-PNIYTVGPLPLLCKQVDETKF 80 (299)
Q Consensus 4 ~~~~~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~LE~~~~~~~r~~~-p~v~~VGpl~~~~~~~~~~~~ 80 (299)
++.+|+|++.. ..+..+.+..++.+....+.+++++|+|||+|||+.++++++... ++++.|||++.....
T Consensus 166 l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~vlvNTf~eLE~~~~~~~~~~~~~~v~~VGPL~~~~~~------ 239 (453)
T PLN02764 166 LRKQDAYTMKNLEPTNTIDVGPNLLERVTTSLMNSDVIAIRTAREIEGNFCDYIEKHCRKKVLLTGPVFPEPDK------ 239 (453)
T ss_pred CcHhhCcchhhcCCCccchhHHHHHHHHHHhhccCCEEEEeccHHhhHHHHHHHHhhcCCcEEEeccCccCccc------
Confidence 67788887533 223334455566665577889999999999999999999998753 579999999753211
Q ss_pred ccCCCCCcccchhhhHhhccCCCCceEEEeecCCcccCHHHHHHHHHHHHcCCCCEEEEEcCCCCC-CCCcCCChhhhhh
Q 022321 81 RSFGSSLWKEDTDCLKWLDKRDANSVVYVNYGSVTVMSEQHLTEFAWGLANSKRPFLWILRPDVVM-GDSVVLPDEYFEE 159 (299)
Q Consensus 81 ~~l~~~~~~~~~~~~~wl~~~~~~~vVyvsfGS~~~~~~~~~~~l~~al~~~~~~~iw~~~~~~~~-~~~~~l~~~~~~~ 159 (299)
. . ..+.+|.+|||++++++||||||||...++.+++.+++.+|+.++.+|+|+++..... .....+|++|.++
T Consensus 240 -~--~---~~~~~cl~WLD~q~~~sVvyvsfGS~~~~~~~q~~ela~gL~~s~~pflwv~r~~~~~~~~~~~lp~~f~~r 313 (453)
T PLN02764 240 -T--R---ELEERWVKWLSGYEPDSVVFCALGSQVILEKDQFQELCLGMELTGSPFLVAVKPPRGSSTIQEALPEGFEER 313 (453)
T ss_pred -c--c---cchhHHHHHHhCCCCCceEEEeecccccCCHHHHHHHHHHHHhCCCCeEEEEeCCCCCcchhhhCCcchHhh
Confidence 0 0 1235799999999999999999999998999999999999999999999999953211 1234689999999
Q ss_pred hcCCeEEE-eecchhhhhcCCCcceEeeccCcchhhhhHhcCCcEEeccCcCCHHHHHHHHHHHhCceEEecC----CCC
Q 022321 160 IKDRGLIV-SWCNQEQVLLHPSVGAFLTHCGWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNH----DVK 234 (299)
Q Consensus 160 ~~~n~~v~-~~~pq~~iL~~~~v~~fItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~----~~~ 234 (299)
+.++++++ +|+||.+||+|+++++|||||||||++||+++|||||+||++.||+.||+++++.+|+|+.+.. .++
T Consensus 314 ~~grG~v~~~W~PQ~~vL~h~~v~~FvtH~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~l~~~~g~gv~~~~~~~~~~~ 393 (453)
T PLN02764 314 VKGRGVVWGGWVQQPLILSHPSVGCFVSHCGFGSMWESLLSDCQIVLVPQLGDQVLNTRLLSDELKVSVEVAREETGWFS 393 (453)
T ss_pred hccCCcEEeCCCCHHHHhcCcccCeEEecCCchHHHHHHHcCCCEEeCCcccchHHHHHHHHHHhceEEEeccccCCccC
Confidence 88888765 9999999999999999999999999999999999999999999999999999667999999843 489
Q ss_pred HHHHHHHHHHHhcC--ChhHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhcCC
Q 022321 235 RGDIEALVKEMMEG--DEGKKMRQKAWEWKKKAEAATAVGGQSYNNFDRLVKMVLHQGN 291 (299)
Q Consensus 235 ~~~l~~av~~ll~~--~~~~~~r~~a~~l~~~~~~a~~~gg~s~~~l~~~v~~l~~~~~ 291 (299)
.++|+++|+++|++ ++++++|++++++++.++ ++|||+.++.+||+++.+...
T Consensus 394 ~e~i~~av~~vm~~~~~~g~~~r~~a~~~~~~~~----~~GSS~~~l~~lv~~~~~~~~ 448 (453)
T PLN02764 394 KESLRDAINSVMKRDSEIGNLVKKNHTKWRETLA----SPGLLTGYVDNFIESLQDLVS 448 (453)
T ss_pred HHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHH----hcCCHHHHHHHHHHHHHHhcc
Confidence 99999999999987 457889999999999984 589999999999999988644
No 16
>PLN02534 UDP-glycosyltransferase
Probab=100.00 E-value=1.5e-52 Score=400.06 Aligned_cols=279 Identities=34% Similarity=0.624 Sum_probs=225.4
Q ss_pred CCCCCCCcccccCCCchhHHHHHHHHHhh-ccCccEEEEcCcccccHHHHHHHHhcC-CCEEEeCcccCCcccccccccc
Q 022321 4 IRLRDLPSFIRTTDPNEIMFDFMGSEAQN-CFRSSAIIFNTFDEFEHAALEVIASKF-PNIYTVGPLPLLCKQVDETKFR 81 (299)
Q Consensus 4 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~ns~~~LE~~~~~~~r~~~-p~v~~VGpl~~~~~~~~~~~~~ 81 (299)
++.+|||++++.... + ..+.+.+.. ..+++++|+|||+|||+.++++++... ++++.|||++.......+
T Consensus 187 l~~~dlp~~~~~~~~---~-~~~~~~~~~~~~~a~~vlvNTf~eLE~~~l~~l~~~~~~~v~~VGPL~~~~~~~~~---- 258 (491)
T PLN02534 187 ITRAQLPGAFVSLPD---L-DDVRNKMREAESTAFGVVVNSFNELEHGCAEAYEKAIKKKVWCVGPVSLCNKRNLD---- 258 (491)
T ss_pred ccHHHCChhhcCccc---H-HHHHHHHHhhcccCCEEEEecHHHhhHHHHHHHHhhcCCcEEEECccccccccccc----
Confidence 788889876542211 2 223333443 346789999999999999999998755 589999999753211000
Q ss_pred cCC-CCCcc-cchhhhHhhccCCCCceEEEeecCCcccCHHHHHHHHHHHHcCCCCEEEEEcCCCC-CCC-CcCCChhhh
Q 022321 82 SFG-SSLWK-EDTDCLKWLDKRDANSVVYVNYGSVTVMSEQHLTEFAWGLANSKRPFLWILRPDVV-MGD-SVVLPDEYF 157 (299)
Q Consensus 82 ~l~-~~~~~-~~~~~~~wl~~~~~~~vVyvsfGS~~~~~~~~~~~l~~al~~~~~~~iw~~~~~~~-~~~-~~~l~~~~~ 157 (299)
... ..... ++++|.+|||++++++||||||||...+..+++.+++.+|+.++++|||+++.... .+. ...+|++|.
T Consensus 259 ~~~~~~~~~~~~~~cl~wLd~~~~~sVvyvsfGS~~~~~~~q~~e~a~gl~~~~~~flW~~r~~~~~~~~~~~~~p~gf~ 338 (491)
T PLN02534 259 KFERGNKASIDETQCLEWLDSMKPRSVIYACLGSLCRLVPSQLIELGLGLEASKKPFIWVIKTGEKHSELEEWLVKENFE 338 (491)
T ss_pred ccccCCccccchHHHHHHHhcCCCCceEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEEecCccccchhhhcCchhhH
Confidence 000 01111 23579999999988999999999999999999999999999999999999984311 111 123678888
Q ss_pred hhhc-CCeEEEeecchhhhhcCCCcceEeeccCcchhhhhHhcCCcEEeccCcCCHHHHHHHHHHHhCceEEecC-----
Q 022321 158 EEIK-DRGLIVSWCNQEQVLLHPSVGAFLTHCGWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNH----- 231 (299)
Q Consensus 158 ~~~~-~n~~v~~~~pq~~iL~~~~v~~fItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~----- 231 (299)
+++. .++++.+|+||..||+|+++++|||||||||++||+++|||||+||+++||+.||+++++.+|+|+++..
T Consensus 339 ~~~~~~g~~v~~w~pq~~iL~h~~v~~fvtH~G~ns~~ea~~~GvP~v~~P~~~dq~~na~~~~e~~~vGv~~~~~~~~~ 418 (491)
T PLN02534 339 ERIKGRGLLIKGWAPQVLILSHPAIGGFLTHCGWNSTIEGICSGVPMITWPLFAEQFLNEKLIVEVLRIGVRVGVEVPVR 418 (491)
T ss_pred HhhccCCeeccCCCCHHHHhcCCccceEEecCccHHHHHHHHcCCCEEeccccccHHHHHHHHHHhhcceEEeccccccc
Confidence 7764 4555669999999999999999999999999999999999999999999999999999899999998831
Q ss_pred ---------CCCHHHHHHHHHHHhc--CChhHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhcC
Q 022321 232 ---------DVKRGDIEALVKEMME--GDEGKKMRQKAWEWKKKAEAATAVGGQSYNNFDRLVKMVLHQG 290 (299)
Q Consensus 232 ---------~~~~~~l~~av~~ll~--~~~~~~~r~~a~~l~~~~~~a~~~gg~s~~~l~~~v~~l~~~~ 290 (299)
.+++++|+++|+++|. +++|+++|+||++|++++++|+.+||||++++++||+++.+..
T Consensus 419 ~~~~~~~~~~v~~eev~~~v~~~m~~~~eeg~~~R~rA~elk~~a~~Av~~GGSS~~nl~~fv~~i~~~~ 488 (491)
T PLN02534 419 WGDEERVGVLVKKDEVEKAVKTLMDDGGEEGERRRRRAQELGVMARKAMELGGSSHINLSILIQDVLKQQ 488 (491)
T ss_pred ccccccccCccCHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHh
Confidence 2799999999999997 5678899999999999999999999999999999999998654
No 17
>PLN02670 transferase, transferring glycosyl groups
Probab=100.00 E-value=5.2e-52 Score=394.64 Aligned_cols=277 Identities=30% Similarity=0.488 Sum_probs=226.1
Q ss_pred CCCCCCCcccccCCCchhHHHHHHHHHhhccCccEEEEcCcccccHHHHHHHHhcC-CCEEEeCcccCCccccccccccc
Q 022321 4 IRLRDLPSFIRTTDPNEIMFDFMGSEAQNCFRSSAIIFNTFDEFEHAALEVIASKF-PNIYTVGPLPLLCKQVDETKFRS 82 (299)
Q Consensus 4 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~LE~~~~~~~r~~~-p~v~~VGpl~~~~~~~~~~~~~~ 82 (299)
++.+|||++++...........+.+....+.+++++|+|||+|||+.++++++... +++++|||++......... .
T Consensus 182 ~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~gvlvNTf~eLE~~~l~~l~~~~~~~v~~VGPl~~~~~~~~~~---~ 258 (472)
T PLN02670 182 FRYHEVTKYVEKTEEDETGPSDSVRFGFAIGGSDVVIIRSSPEFEPEWFDLLSDLYRKPIIPIGFLPPVIEDDEED---D 258 (472)
T ss_pred ccHHHhhHHHhccCccchHHHHHHHHHhhcccCCEEEEeCHHHHhHHHHHHHHHhhCCCeEEEecCCccccccccc---c
Confidence 45679998775433332333444566667789999999999999999999998754 5899999997531110000 0
Q ss_pred CCCCCcccchhhhHhhccCCCCceEEEeecCCcccCHHHHHHHHHHHHcCCCCEEEEEcCCCC--CCCCcCCChhhhhhh
Q 022321 83 FGSSLWKEDTDCLKWLDKRDANSVVYVNYGSVTVMSEQHLTEFAWGLANSKRPFLWILRPDVV--MGDSVVLPDEYFEEI 160 (299)
Q Consensus 83 l~~~~~~~~~~~~~wl~~~~~~~vVyvsfGS~~~~~~~~~~~l~~al~~~~~~~iw~~~~~~~--~~~~~~l~~~~~~~~ 160 (299)
. .+. ...++|.+|||++++++||||||||...++.+++.+++.+|+.++++|||+++.... .+....+|++|.+++
T Consensus 259 ~-~~~-~~~~~~~~wLd~~~~~sVvyvsfGS~~~l~~~q~~ela~gl~~s~~~FlWv~r~~~~~~~~~~~~lp~~f~~~~ 336 (472)
T PLN02670 259 T-IDV-KGWVRIKEWLDKQRVNSVVYVALGTEASLRREEVTELALGLEKSETPFFWVLRNEPGTTQNALEMLPDGFEERV 336 (472)
T ss_pred c-ccc-chhHHHHHHHhcCCCCceEEEEecccccCCHHHHHHHHHHHHHCCCCEEEEEcCCcccccchhhcCChHHHHhc
Confidence 0 000 012579999999988999999999999999999999999999999999999985311 111235899999999
Q ss_pred cCCeEE-EeecchhhhhcCCCcceEeeccCcchhhhhHhcCCcEEeccCcCCHHHHHHHHHHHhCceEEecC-----CCC
Q 022321 161 KDRGLI-VSWCNQEQVLLHPSVGAFLTHCGWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNH-----DVK 234 (299)
Q Consensus 161 ~~n~~v-~~~~pq~~iL~~~~v~~fItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~-----~~~ 234 (299)
.+++++ .+|+||.+||+|+++++|||||||||++||+++|||||+||+++||+.||+++ +++|+|+.+.. .++
T Consensus 337 ~~rG~vv~~W~PQ~~IL~H~~v~~FvtHcGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v-~~~g~Gv~l~~~~~~~~~~ 415 (472)
T PLN02670 337 KGRGMIHVGWVPQVKILSHESVGGFLTHCGWNSVVEGLGFGRVLILFPVLNEQGLNTRLL-HGKKLGLEVPRDERDGSFT 415 (472)
T ss_pred cCCCeEEeCcCCHHHHhcCcccceeeecCCcchHHHHHHcCCCEEeCcchhccHHHHHHH-HHcCeeEEeeccccCCcCc
Confidence 888876 59999999999999999999999999999999999999999999999999999 78999999964 389
Q ss_pred HHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhcC
Q 022321 235 RGDIEALVKEMMEGDEGKKMRQKAWEWKKKAEAATAVGGQSYNNFDRLVKMVLHQG 290 (299)
Q Consensus 235 ~~~l~~av~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gg~s~~~l~~~v~~l~~~~ 290 (299)
.++|+++|+++|++++|++||+||+++++.+++ .+...+.+++|++.+.+..
T Consensus 416 ~e~i~~av~~vm~~~~g~~~r~~a~~l~~~~~~----~~~~~~~~~~~~~~l~~~~ 467 (472)
T PLN02670 416 SDSVAESVRLAMVDDAGEEIRDKAKEMRNLFGD----MDRNNRYVDELVHYLRENR 467 (472)
T ss_pred HHHHHHHHHHHhcCcchHHHHHHHHHHHHHHhC----cchhHHHHHHHHHHHHHhc
Confidence 999999999999988888999999999999863 5666777899999988765
No 18
>PLN02208 glycosyltransferase family protein
Probab=100.00 E-value=8.8e-52 Score=391.48 Aligned_cols=266 Identities=22% Similarity=0.361 Sum_probs=218.4
Q ss_pred CCCCCCCcccccCCCchhHHHHHHHHH-hhccCccEEEEcCcccccHHHHHHHHhc-CCCEEEeCcccCCcccccccccc
Q 022321 4 IRLRDLPSFIRTTDPNEIMFDFMGSEA-QNCFRSSAIIFNTFDEFEHAALEVIASK-FPNIYTVGPLPLLCKQVDETKFR 81 (299)
Q Consensus 4 ~~~~~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~ns~~~LE~~~~~~~r~~-~p~v~~VGpl~~~~~~~~~~~~~ 81 (299)
++.+|+|++ . ..+.++..+.+.+ ..+.+++++|+|||+|||+.++++++.. .|++++|||++.....
T Consensus 165 ~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~vl~Ntf~eLE~~~~~~~~~~~~~~v~~vGpl~~~~~~------- 233 (442)
T PLN02208 165 FRENDAHAL-A---TLSIFYKRLYHQITTGLKSCDVIALRTCKEIEGKFCDYISRQYHKKVLLTGPMFPEPDT------- 233 (442)
T ss_pred cCHHHcCcc-c---ccchHHHHHHHHHHhhhccCCEEEEECHHHHHHHHHHHHHhhcCCCEEEEeecccCcCC-------
Confidence 467778854 1 1223334444333 5677899999999999999999988764 4799999999854220
Q ss_pred cCCCCCcccchhhhHhhccCCCCceEEEeecCCcccCHHHHHHHHHHHHcCCCCEEEEEcCCCC-CCCCcCCChhhhhhh
Q 022321 82 SFGSSLWKEDTDCLKWLDKRDANSVVYVNYGSVTVMSEQHLTEFAWGLANSKRPFLWILRPDVV-MGDSVVLPDEYFEEI 160 (299)
Q Consensus 82 ~l~~~~~~~~~~~~~wl~~~~~~~vVyvsfGS~~~~~~~~~~~l~~al~~~~~~~iw~~~~~~~-~~~~~~l~~~~~~~~ 160 (299)
. .. .+.+|.+|||.+++++||||||||...++.+++.+++.+++..+.+|+|+++.... ......+|++|.+++
T Consensus 234 ~--~~---~~~~~~~wLd~~~~~sVvyvSfGS~~~l~~~q~~e~~~~l~~s~~pf~wv~r~~~~~~~~~~~lp~~f~~r~ 308 (442)
T PLN02208 234 S--KP---LEEQWSHFLSGFPPKSVVFCSLGSQIILEKDQFQELCLGMELTGLPFLIAVKPPRGSSTVQEGLPEGFEERV 308 (442)
T ss_pred C--CC---CHHHHHHHHhcCCCCcEEEEeccccccCCHHHHHHHHHHHHhCCCcEEEEEeCCCcccchhhhCCHHHHHHH
Confidence 0 00 24579999999988999999999999899999999999998899999999985311 111235888999888
Q ss_pred cCCeE-EEeecchhhhhcCCCcceEeeccCcchhhhhHhcCCcEEeccCcCCHHHHHHHHHHHhCceEEecC-C---CCH
Q 022321 161 KDRGL-IVSWCNQEQVLLHPSVGAFLTHCGWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNH-D---VKR 235 (299)
Q Consensus 161 ~~n~~-v~~~~pq~~iL~~~~v~~fItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~-~---~~~ 235 (299)
.++.+ +.+|+||.+||+|+++++|||||||||++||+++|||||+||+++||+.||+++++.+|+|+.+.. + +++
T Consensus 309 ~~~g~~v~~W~PQ~~iL~H~~v~~FvtHcG~nS~~Eai~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~~~~~~~~ 388 (442)
T PLN02208 309 KGRGVVWGGWVQQPLILDHPSIGCFVNHCGPGTIWESLVSDCQMVLIPFLSDQVLFTRLMTEEFEVSVEVSREKTGWFSK 388 (442)
T ss_pred hcCCcEeeccCCHHHHhcCCccCeEEccCCchHHHHHHHcCCCEEecCcchhhHHHHHHHHHHhceeEEeccccCCcCcH
Confidence 66555 559999999999999999999999999999999999999999999999999998567999999975 3 899
Q ss_pred HHHHHHHHHHhcCC--hhHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhc
Q 022321 236 GDIEALVKEMMEGD--EGKKMRQKAWEWKKKAEAATAVGGQSYNNFDRLVKMVLHQ 289 (299)
Q Consensus 236 ~~l~~av~~ll~~~--~~~~~r~~a~~l~~~~~~a~~~gg~s~~~l~~~v~~l~~~ 289 (299)
++|+++|+++|+++ +++.+|++|+++++.+. ++|||+.++.+||+++++.
T Consensus 389 ~~l~~ai~~~m~~~~e~g~~~r~~~~~~~~~~~----~~gsS~~~l~~~v~~l~~~ 440 (442)
T PLN02208 389 ESLSNAIKSVMDKDSDLGKLVRSNHTKLKEILV----SPGLLTGYVDKFVEELQEY 440 (442)
T ss_pred HHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHh----cCCcHHHHHHHHHHHHHHh
Confidence 99999999999864 48899999999999973 3789999999999998653
No 19
>PLN03007 UDP-glucosyltransferase family protein
Probab=100.00 E-value=4.4e-51 Score=392.13 Aligned_cols=268 Identities=30% Similarity=0.566 Sum_probs=222.1
Q ss_pred hhHHHHHHHHHhhccCccEEEEcCcccccHHHHHHHHhcC-CCEEEeCcccCCcccccccccccCCCCCcccchhhhHhh
Q 022321 20 EIMFDFMGSEAQNCFRSSAIIFNTFDEFEHAALEVIASKF-PNIYTVGPLPLLCKQVDETKFRSFGSSLWKEDTDCLKWL 98 (299)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~l~ns~~~LE~~~~~~~r~~~-p~v~~VGpl~~~~~~~~~~~~~~l~~~~~~~~~~~~~wl 98 (299)
..+..++.+..+.+.+++++++|||++||+++++.++... .++++|||+........... ..+.+.+..+.+|.+||
T Consensus 202 ~~~~~~~~~~~~~~~~~~~vl~Nt~~~le~~~~~~~~~~~~~~~~~VGPl~~~~~~~~~~~--~~~~~~~~~~~~~~~wL 279 (482)
T PLN03007 202 SPMGKFMKEVRESEVKSFGVLVNSFYELESAYADFYKSFVAKRAWHIGPLSLYNRGFEEKA--ERGKKANIDEQECLKWL 279 (482)
T ss_pred hhHHHHHHHHHhhcccCCEEEEECHHHHHHHHHHHHHhccCCCEEEEcccccccccccccc--ccCCccccchhHHHHHH
Confidence 4456677777777889999999999999999999998765 47999999865322100000 00111222346799999
Q ss_pred ccCCCCceEEEeecCCcccCHHHHHHHHHHHHcCCCCEEEEEcCCCCC-CCCcCCChhhhhhhc-CCeEEEeecchhhhh
Q 022321 99 DKRDANSVVYVNYGSVTVMSEQHLTEFAWGLANSKRPFLWILRPDVVM-GDSVVLPDEYFEEIK-DRGLIVSWCNQEQVL 176 (299)
Q Consensus 99 ~~~~~~~vVyvsfGS~~~~~~~~~~~l~~al~~~~~~~iw~~~~~~~~-~~~~~l~~~~~~~~~-~n~~v~~~~pq~~iL 176 (299)
+++++++||||||||+..++.+++.+++.+|+.++++|||+++..... +....+|++|.+++. .|+++.+|+||.+||
T Consensus 280 d~~~~~svvyvsfGS~~~~~~~~~~~~~~~l~~~~~~flw~~~~~~~~~~~~~~lp~~~~~r~~~~g~~v~~w~PQ~~iL 359 (482)
T PLN03007 280 DSKKPDSVIYLSFGSVASFKNEQLFEIAAGLEGSGQNFIWVVRKNENQGEKEEWLPEGFEERTKGKGLIIRGWAPQVLIL 359 (482)
T ss_pred hcCCCCceEEEeecCCcCCCHHHHHHHHHHHHHCCCCEEEEEecCCcccchhhcCCHHHHHHhccCCEEEecCCCHHHHh
Confidence 999889999999999988889999999999999999999999864211 112357888888764 556677999999999
Q ss_pred cCCCcceEeeccCcchhhhhHhcCCcEEeccCcCCHHHHHHHHHHHhCceEEec--------C-CCCHHHHHHHHHHHhc
Q 022321 177 LHPSVGAFLTHCGWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVN--------H-DVKRGDIEALVKEMME 247 (299)
Q Consensus 177 ~~~~v~~fItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~--------~-~~~~~~l~~av~~ll~ 247 (299)
+|+++++|||||||||++||+++|||||+||+++||+.||+++++.+++|+.+. . .+++++|+++|+++|+
T Consensus 360 ~h~~v~~fvtH~G~nS~~Eal~~GVP~v~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~l~~av~~~m~ 439 (482)
T PLN03007 360 DHQATGGFVTHCGWNSLLEGVAAGLPMVTWPVGAEQFYNEKLVTQVLRTGVSVGAKKLVKVKGDFISREKVEKAVREVIV 439 (482)
T ss_pred ccCccceeeecCcchHHHHHHHcCCCeeeccchhhhhhhHHHHHHhhcceeEeccccccccccCcccHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999866677777652 2 5899999999999999
Q ss_pred CChhHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhc
Q 022321 248 GDEGKKMRQKAWEWKKKAEAATAVGGQSYNNFDRLVKMVLHQ 289 (299)
Q Consensus 248 ~~~~~~~r~~a~~l~~~~~~a~~~gg~s~~~l~~~v~~l~~~ 289 (299)
+++|++||+||+++++.+++|+.+||||++++++||+++.+.
T Consensus 440 ~~~~~~~r~~a~~~~~~a~~a~~~gGsS~~~l~~~v~~~~~~ 481 (482)
T PLN03007 440 GEEAEERRLRAKKLAEMAKAAVEEGGSSFNDLNKFMEELNSR 481 (482)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhc
Confidence 988999999999999999999999999999999999998753
No 20
>PLN02448 UDP-glycosyltransferase family protein
Probab=100.00 E-value=3.6e-51 Score=390.73 Aligned_cols=273 Identities=35% Similarity=0.612 Sum_probs=226.7
Q ss_pred CCCCCCCCCcccccCCCchhHHHHHHHHHhhccCccEEEEcCcccccHHHHHHHHhcC-CCEEEeCcccCCccccccccc
Q 022321 2 SNIRLRDLPSFIRTTDPNEIMFDFMGSEAQNCFRSSAIIFNTFDEFEHAALEVIASKF-PNIYTVGPLPLLCKQVDETKF 80 (299)
Q Consensus 2 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~LE~~~~~~~r~~~-p~v~~VGpl~~~~~~~~~~~~ 80 (299)
|+++.+|+|.++... .......+.+.+..+.+++.+++|||+|||+.++++++... +++++|||+........ ..
T Consensus 177 ~~l~~~dlp~~~~~~--~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~l~~~~~~~~~~iGP~~~~~~~~~-~~- 252 (459)
T PLN02448 177 SSTRLSDLPPIFHGN--SRRVLKRILEAFSWVPKAQYLLFTSFYELEAQAIDALKSKFPFPVYPIGPSIPYMELKD-NS- 252 (459)
T ss_pred CCCChHHCchhhcCC--chHHHHHHHHHHhhcccCCEEEEccHHHhhHHHHHHHHhhcCCceEEecCcccccccCC-Cc-
Confidence 457888898766532 23445566777888889999999999999999999998765 48999999975321100 00
Q ss_pred ccCCCCCcccchhhhHhhccCCCCceEEEeecCCcccCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCcCCChhhhhhh
Q 022321 81 RSFGSSLWKEDTDCLKWLDKRDANSVVYVNYGSVTVMSEQHLTEFAWGLANSKRPFLWILRPDVVMGDSVVLPDEYFEEI 160 (299)
Q Consensus 81 ~~l~~~~~~~~~~~~~wl~~~~~~~vVyvsfGS~~~~~~~~~~~l~~al~~~~~~~iw~~~~~~~~~~~~~l~~~~~~~~ 160 (299)
...+ ....+.+|..||+.+++++||||||||....+.+++.+++.+|+.++++|||+++.. ..++.+..
T Consensus 253 ~~~~--~~~~~~~~~~wl~~~~~~~vvyvsfGs~~~~~~~~~~~~~~~l~~~~~~~lw~~~~~---------~~~~~~~~ 321 (459)
T PLN02448 253 SSSN--NEDNEPDYFQWLDSQPEGSVLYVSLGSFLSVSSAQMDEIAAGLRDSGVRFLWVARGE---------ASRLKEIC 321 (459)
T ss_pred cccc--cccchhHHHHHHcCCCCCceEEEeecccccCCHHHHHHHHHHHHhCCCCEEEEEcCc---------hhhHhHhc
Confidence 0000 111234799999999889999999999988889999999999999999999988632 12344445
Q ss_pred cCCeEEEeecchhhhhcCCCcceEeeccCcchhhhhHhcCCcEEeccCcCCHHHHHHHHHHHhCceEEecC------CCC
Q 022321 161 KDRGLIVSWCNQEQVLLHPSVGAFLTHCGWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNH------DVK 234 (299)
Q Consensus 161 ~~n~~v~~~~pq~~iL~~~~v~~fItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~------~~~ 234 (299)
++|+++++|+||.+||+|+++++|||||||||++||+++|||||+||+++||+.||+++++.+|+|+.+.. .++
T Consensus 322 ~~~~~v~~w~pQ~~iL~h~~v~~fvtHgG~nS~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~~~~ 401 (459)
T PLN02448 322 GDMGLVVPWCDQLKVLCHSSVGGFWTHCGWNSTLEAVFAGVPMLTFPLFWDQPLNSKLIVEDWKIGWRVKREVGEETLVG 401 (459)
T ss_pred cCCEEEeccCCHHHHhccCccceEEecCchhHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEEecccccCCcCc
Confidence 67899999999999999999999999999999999999999999999999999999999666899999852 479
Q ss_pred HHHHHHHHHHHhcC--ChhHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhc
Q 022321 235 RGDIEALVKEMMEG--DEGKKMRQKAWEWKKKAEAATAVGGQSYNNFDRLVKMVLHQ 289 (299)
Q Consensus 235 ~~~l~~av~~ll~~--~~~~~~r~~a~~l~~~~~~a~~~gg~s~~~l~~~v~~l~~~ 289 (299)
+++|+++|+++|++ +++++||+||++|++.+++|+.+||||++++++||+++.+.
T Consensus 402 ~~~l~~av~~vl~~~~~~~~~~r~~a~~~~~~~~~a~~~gGss~~~l~~~v~~~~~~ 458 (459)
T PLN02448 402 REEIAELVKRFMDLESEEGKEMRRRAKELQEICRGAIAKGGSSDTNLDAFIRDISQG 458 (459)
T ss_pred HHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhcc
Confidence 99999999999986 46889999999999999999999999999999999999753
No 21
>PLN00414 glycosyltransferase family protein
Probab=100.00 E-value=1.5e-50 Score=383.54 Aligned_cols=253 Identities=23% Similarity=0.399 Sum_probs=213.8
Q ss_pred HHHHHHHhhccCccEEEEcCcccccHHHHHHHHhcC-CCEEEeCcccCCcccccccccccCCCCCcccchhhhHhhccCC
Q 022321 24 DFMGSEAQNCFRSSAIIFNTFDEFEHAALEVIASKF-PNIYTVGPLPLLCKQVDETKFRSFGSSLWKEDTDCLKWLDKRD 102 (299)
Q Consensus 24 ~~~~~~~~~~~~~~~~l~ns~~~LE~~~~~~~r~~~-p~v~~VGpl~~~~~~~~~~~~~~l~~~~~~~~~~~~~wl~~~~ 102 (299)
..+.+.++.+.+++++|+|||+|||+.++++++... +++++|||+...... . . . ...+++|.+|||+++
T Consensus 181 ~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~~~~~v~~VGPl~~~~~~-~-----~-~---~~~~~~~~~WLD~q~ 250 (446)
T PLN00414 181 ELFGLITKGLKNCDVVSIRTCVELEGNLCDFIERQCQRKVLLTGPMLPEPQN-K-----S-G---KPLEDRWNHWLNGFE 250 (446)
T ss_pred HHHHHHHHhhccCCEEEEechHHHHHHHHHHHHHhcCCCeEEEcccCCCccc-c-----c-C---cccHHHHHHHHhcCC
Confidence 345556677788999999999999999999998754 579999999743211 0 0 0 012457999999999
Q ss_pred CCceEEEeecCCcccCHHHHHHHHHHHHcCCCCEEEEEcCCCCC-CCCcCCChhhhhhhcCCeEEE-eecchhhhhcCCC
Q 022321 103 ANSVVYVNYGSVTVMSEQHLTEFAWGLANSKRPFLWILRPDVVM-GDSVVLPDEYFEEIKDRGLIV-SWCNQEQVLLHPS 180 (299)
Q Consensus 103 ~~~vVyvsfGS~~~~~~~~~~~l~~al~~~~~~~iw~~~~~~~~-~~~~~l~~~~~~~~~~n~~v~-~~~pq~~iL~~~~ 180 (299)
++|||||||||...++.+++.+++.+|+.++.+|+|+++..... +..+.+|++|.+++.++++++ +|+||..||+|++
T Consensus 251 ~~sVvyvsfGS~~~~~~~q~~e~a~gL~~s~~~Flwvvr~~~~~~~~~~~lp~~f~~r~~~~g~vv~~w~PQ~~vL~h~~ 330 (446)
T PLN00414 251 PGSVVFCAFGTQFFFEKDQFQEFCLGMELTGLPFLIAVMPPKGSSTVQEALPEGFEERVKGRGIVWEGWVEQPLILSHPS 330 (446)
T ss_pred CCceEEEeecccccCCHHHHHHHHHHHHHcCCCeEEEEecCCCcccchhhCChhHHHHhcCCCeEEeccCCHHHHhcCCc
Confidence 99999999999999999999999999999999999999864211 123468999999999998876 8999999999999
Q ss_pred cceEeeccCcchhhhhHhcCCcEEeccCcCCHHHHHHHHHHHhCceEEecC----CCCHHHHHHHHHHHhcC--ChhHHH
Q 022321 181 VGAFLTHCGWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNH----DVKRGDIEALVKEMMEG--DEGKKM 254 (299)
Q Consensus 181 v~~fItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~----~~~~~~l~~av~~ll~~--~~~~~~ 254 (299)
+++|||||||||++||+++|||||+||++.||+.||+++++++|+|+.+.. .+++++|+++|+++|++ ++++++
T Consensus 331 v~~fvtH~G~nS~~Ea~~~GvP~l~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~i~~~v~~~m~~~~e~g~~~ 410 (446)
T PLN00414 331 VGCFVNHCGFGSMWESLVSDCQIVFIPQLADQVLITRLLTEELEVSVKVQREDSGWFSKESLRDTVKSVMDKDSEIGNLV 410 (446)
T ss_pred cceEEecCchhHHHHHHHcCCCEEecCcccchHHHHHHHHHHhCeEEEeccccCCccCHHHHHHHHHHHhcCChhhHHHH
Confidence 999999999999999999999999999999999999999668999999964 38999999999999986 347889
Q ss_pred HHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhcC
Q 022321 255 RQKAWEWKKKAEAATAVGGQSYNNFDRLVKMVLHQG 290 (299)
Q Consensus 255 r~~a~~l~~~~~~a~~~gg~s~~~l~~~v~~l~~~~ 290 (299)
|++|+++++.+ +++||++ ..+.+||+++.+..
T Consensus 411 r~~a~~~~~~~---~~~gg~s-s~l~~~v~~~~~~~ 442 (446)
T PLN00414 411 KRNHKKLKETL---VSPGLLS-GYADKFVEALENEV 442 (446)
T ss_pred HHHHHHHHHHH---HcCCCcH-HHHHHHHHHHHHhc
Confidence 99999999996 4667734 33899999996643
No 22
>PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule. This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A ....
Probab=100.00 E-value=5.5e-43 Score=338.61 Aligned_cols=200 Identities=28% Similarity=0.506 Sum_probs=159.7
Q ss_pred cCccEEEEcCcccccHHHHHHHHhcCCCEEEeCcccCCcccccccccccCCCCCcccchhhhHhhccCCCCceEEEeecC
Q 022321 34 FRSSAIIFNTFDEFEHAALEVIASKFPNIYTVGPLPLLCKQVDETKFRSFGSSLWKEDTDCLKWLDKRDANSVVYVNYGS 113 (299)
Q Consensus 34 ~~~~~~l~ns~~~LE~~~~~~~r~~~p~v~~VGpl~~~~~~~~~~~~~~l~~~~~~~~~~~~~wl~~~~~~~vVyvsfGS 113 (299)
.+++++++|+.+.++.| ||.+|++++||+++..... ++ ..++..|++...++++|||||||
T Consensus 225 ~~~~l~l~ns~~~ld~p-----rp~~p~v~~vGgl~~~~~~-------~l-------~~~~~~~~~~~~~~~vv~vsfGs 285 (500)
T PF00201_consen 225 SNASLVLINSHPSLDFP-----RPLLPNVVEVGGLHIKPAK-------PL-------PEELWNFLDSSGKKGVVYVSFGS 285 (500)
T ss_dssp HHHHHCCSSTEEE---------HHHHCTSTTGCGC-S-----------TC-------HHHHHHHTSTTTTTEEEEEE-TS
T ss_pred HHHHHHhhhccccCcCC-----cchhhcccccCcccccccc-------cc-------ccccchhhhccCCCCEEEEecCc
Confidence 45788999998888766 9999999999999875442 22 23568899885578999999999
Q ss_pred Ccc-cCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCcCCChhhhhhhcCCeEEEeecchhhhhcCCCcceEeeccCcch
Q 022321 114 VTV-MSEQHLTEFAWGLANSKRPFLWILRPDVVMGDSVVLPDEYFEEIKDRGLIVSWCNQEQVLLHPSVGAFLTHCGWNS 192 (299)
Q Consensus 114 ~~~-~~~~~~~~l~~al~~~~~~~iw~~~~~~~~~~~~~l~~~~~~~~~~n~~v~~~~pq~~iL~~~~v~~fItHgG~~s 192 (299)
... ++.+..+.++++|++++++|||++++. ....+++|+++++|+||.+||+||++++||||||+||
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~iW~~~~~------------~~~~l~~n~~~~~W~PQ~~lL~hp~v~~fitHgG~~s 353 (500)
T PF00201_consen 286 IVSSMPEEKLKEIAEAFENLPQRFIWKYEGE------------PPENLPKNVLIVKWLPQNDLLAHPRVKLFITHGGLNS 353 (500)
T ss_dssp SSTT-HHHHHHHHHHHHHCSTTEEEEEETCS------------HGCHHHTTEEEESS--HHHHHTSTTEEEEEES--HHH
T ss_pred ccchhHHHHHHHHHHHHhhCCCccccccccc------------ccccccceEEEeccccchhhhhcccceeeeeccccch
Confidence 864 555668899999999999999999842 1123578999999999999999999999999999999
Q ss_pred hhhhHhcCCcEEeccCcCCHHHHHHHHHHHhCceEEecC-CCCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHH
Q 022321 193 TMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNH-DVKRGDIEALVKEMMEGDEGKKMRQKAWEWKKKAEAA 268 (299)
Q Consensus 193 ~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~-~~~~~~l~~av~~ll~~~~~~~~r~~a~~l~~~~~~a 268 (299)
++||+++|||||++|+++||+.||+++ ++.|+|+.++. +++.+++.++|+++|+|+ +|++||+++++.+|..
T Consensus 354 ~~Ea~~~gvP~l~~P~~~DQ~~na~~~-~~~G~g~~l~~~~~~~~~l~~ai~~vl~~~---~y~~~a~~ls~~~~~~ 426 (500)
T PF00201_consen 354 TQEALYHGVPMLGIPLFGDQPRNAARV-EEKGVGVVLDKNDLTEEELRAAIREVLENP---SYKENAKRLSSLFRDR 426 (500)
T ss_dssp HHHHHHCT--EEE-GCSTTHHHHHHHH-HHTTSEEEEGGGC-SHHHHHHHHHHHHHSH---HHHHHHHHHHHTTT--
T ss_pred hhhhhhccCCccCCCCcccCCccceEE-EEEeeEEEEEecCCcHHHHHHHHHHHHhhh---HHHHHHHHHHHHHhcC
Confidence 999999999999999999999999999 99999999997 899999999999999998 9999999999999853
No 23
>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional
Probab=100.00 E-value=2e-40 Score=319.37 Aligned_cols=224 Identities=23% Similarity=0.301 Sum_probs=187.8
Q ss_pred hhccCccEEEEcCcccccHHHHHHHHhcCCCEEEeCcccCCcccccccccccCCCCCcccchhhhHhhccCCCCceEEEe
Q 022321 31 QNCFRSSAIIFNTFDEFEHAALEVIASKFPNIYTVGPLPLLCKQVDETKFRSFGSSLWKEDTDCLKWLDKRDANSVVYVN 110 (299)
Q Consensus 31 ~~~~~~~~~l~ns~~~LE~~~~~~~r~~~p~v~~VGpl~~~~~~~~~~~~~~l~~~~~~~~~~~~~wl~~~~~~~vVyvs 110 (299)
+..++++++|+||.+.||++ ||.+|++++|||++....... ++ ++++.+|++.. ++++||||
T Consensus 241 ~l~~~~~l~lvns~~~~d~~-----rp~~p~v~~vGgi~~~~~~~~-----~l-------~~~l~~fl~~~-~~g~V~vS 302 (507)
T PHA03392 241 ELRNRVQLLFVNVHPVFDNN-----RPVPPSVQYLGGLHLHKKPPQ-----PL-------DDYLEEFLNNS-TNGVVYVS 302 (507)
T ss_pred HHHhCCcEEEEecCccccCC-----CCCCCCeeeecccccCCCCCC-----CC-------CHHHHHHHhcC-CCcEEEEE
Confidence 33457889999998888776 999999999999987432110 22 34678999876 46899999
Q ss_pred ecCCc---ccCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCcCCChhhhhhhcCCeEEEeecchhhhhcCCCcceEeec
Q 022321 111 YGSVT---VMSEQHLTEFAWGLANSKRPFLWILRPDVVMGDSVVLPDEYFEEIKDRGLIVSWCNQEQVLLHPSVGAFLTH 187 (299)
Q Consensus 111 fGS~~---~~~~~~~~~l~~al~~~~~~~iw~~~~~~~~~~~~~l~~~~~~~~~~n~~v~~~~pq~~iL~~~~v~~fItH 187 (299)
|||.. .++.+.++.+++++++.+++|||+++... .+ ...|+|+++.+|+||.+||+|+++++||||
T Consensus 303 ~GS~~~~~~~~~~~~~~~l~a~~~l~~~viw~~~~~~-------~~----~~~p~Nv~i~~w~Pq~~lL~hp~v~~fItH 371 (507)
T PHA03392 303 FGSSIDTNDMDNEFLQMLLRTFKKLPYNVLWKYDGEV-------EA----INLPANVLTQKWFPQRAVLKHKNVKAFVTQ 371 (507)
T ss_pred CCCCCcCCCCCHHHHHHHHHHHHhCCCeEEEEECCCc-------Cc----ccCCCceEEecCCCHHHHhcCCCCCEEEec
Confidence 99984 36788999999999999999999997431 11 135789999999999999999999999999
Q ss_pred cCcchhhhhHhcCCcEEeccCcCCHHHHHHHHHHHhCceEEecC-CCCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHH
Q 022321 188 CGWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNH-DVKRGDIEALVKEMMEGDEGKKMRQKAWEWKKKAE 266 (299)
Q Consensus 188 gG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~-~~~~~~l~~av~~ll~~~~~~~~r~~a~~l~~~~~ 266 (299)
||+||++||+++|||||++|+++||+.||+++ +++|+|+.++. +++.++|.++|+++++|+ +||+||+++++.++
T Consensus 372 GG~~s~~Eal~~GvP~v~iP~~~DQ~~Na~rv-~~~G~G~~l~~~~~t~~~l~~ai~~vl~~~---~y~~~a~~ls~~~~ 447 (507)
T PHA03392 372 GGVQSTDEAIDALVPMVGLPMMGDQFYNTNKY-VELGIGRALDTVTVSAAQLVLAIVDVIENP---KYRKNLKELRHLIR 447 (507)
T ss_pred CCcccHHHHHHcCCCEEECCCCccHHHHHHHH-HHcCcEEEeccCCcCHHHHHHHHHHHhCCH---HHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999 89999999987 789999999999999998 99999999999997
Q ss_pred HHHhcCCchHHHHHHHHHHHHhcC
Q 022321 267 AATAVGGQSYNNFDRLVKMVLHQG 290 (299)
Q Consensus 267 ~a~~~gg~s~~~l~~~v~~l~~~~ 290 (299)
+ ..-+........++.+.+..
T Consensus 448 ~---~p~~~~~~av~~iE~v~r~~ 468 (507)
T PHA03392 448 H---QPMTPLHKAIWYTEHVIRNK 468 (507)
T ss_pred h---CCCCHHHHHHHHHHHHHhCC
Confidence 4 23334455567777776544
No 24
>KOG1192 consensus UDP-glucuronosyl and UDP-glucosyl transferase [Carbohydrate transport and metabolism; Energy production and conversion]
Probab=100.00 E-value=2e-35 Score=285.30 Aligned_cols=208 Identities=30% Similarity=0.562 Sum_probs=162.7
Q ss_pred ccCccEEEEcCcccccHHHHHHHHhcCCCEEEeCcccCCcccccccccccCCCCCcccchhhhHhhccCCCC--ceEEEe
Q 022321 33 CFRSSAIIFNTFDEFEHAALEVIASKFPNIYTVGPLPLLCKQVDETKFRSFGSSLWKEDTDCLKWLDKRDAN--SVVYVN 110 (299)
Q Consensus 33 ~~~~~~~l~ns~~~LE~~~~~~~r~~~p~v~~VGpl~~~~~~~~~~~~~~l~~~~~~~~~~~~~wl~~~~~~--~vVyvs 110 (299)
+.+++..++|+.+-++.. .++..+++++|||++...... ....+.+|++..+.. +|||||
T Consensus 222 ~~~~~~~~ln~~~~~~~~----~~~~~~~v~~IG~l~~~~~~~--------------~~~~~~~wl~~~~~~~~~vvyvS 283 (496)
T KOG1192|consen 222 IVNASFIFLNSNPLLDFE----PRPLLPKVIPIGPLHVKDSKQ--------------KSPLPLEWLDILDESRHSVVYIS 283 (496)
T ss_pred hhcCeEEEEccCcccCCC----CCCCCCCceEECcEEecCccc--------------cccccHHHHHHHhhccCCeEEEE
Confidence 345556666665544431 245568999999999763211 001367888877665 999999
Q ss_pred ecCCc---ccCHHHHHHHHHHHHcC-CCCEEEEEcCCCCCCCCcCCChhhhhhhcCCeEEEeecchhhh-hcCCCcceEe
Q 022321 111 YGSVT---VMSEQHLTEFAWGLANS-KRPFLWILRPDVVMGDSVVLPDEYFEEIKDRGLIVSWCNQEQV-LLHPSVGAFL 185 (299)
Q Consensus 111 fGS~~---~~~~~~~~~l~~al~~~-~~~~iw~~~~~~~~~~~~~l~~~~~~~~~~n~~v~~~~pq~~i-L~~~~v~~fI 185 (299)
|||+. .++.++..+++.+|+.+ +++|+|+++.... ..+++++.++-++|+.+.+|+||.++ |.|+++++||
T Consensus 284 fGS~~~~~~lp~~~~~~l~~~l~~~~~~~FiW~~~~~~~----~~~~~~~~~~~~~nV~~~~W~PQ~~lll~H~~v~~Fv 359 (496)
T KOG1192|consen 284 FGSMVNSADLPEEQKKELAKALESLQGVTFLWKYRPDDS----IYFPEGLPNRGRGNVVLSKWAPQNDLLLDHPAVGGFV 359 (496)
T ss_pred CCcccccccCCHHHHHHHHHHHHhCCCceEEEEecCCcc----hhhhhcCCCCCcCceEEecCCCcHHHhcCCCcCcEEE
Confidence 99997 79999999999999999 8899999986421 00223322212457888899999998 6999999999
Q ss_pred eccCcchhhhhHhcCCcEEeccCcCCHHHHHHHHHHHhCceEEecC-CCCHHHHHHHHHHHhcCChhHHHHHHHHHHHHH
Q 022321 186 THCGWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNH-DVKRGDIEALVKEMMEGDEGKKMRQKAWEWKKK 264 (299)
Q Consensus 186 tHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~-~~~~~~l~~av~~ll~~~~~~~~r~~a~~l~~~ 264 (299)
|||||||++|++++|||||++|+++||+.||+++ ++.|.|..+.. +.+.+.+..++.++++++ +|+++|+++++.
T Consensus 360 THgG~nSt~E~~~~GvP~v~~Plf~DQ~~Na~~i-~~~g~~~v~~~~~~~~~~~~~~~~~il~~~---~y~~~~~~l~~~ 435 (496)
T KOG1192|consen 360 THGGWNSTLESIYSGVPMVCVPLFGDQPLNARLL-VRHGGGGVLDKRDLVSEELLEAIKEILENE---EYKEAAKRLSEI 435 (496)
T ss_pred ECCcccHHHHHHhcCCceecCCccccchhHHHHH-HhCCCEEEEehhhcCcHHHHHHHHHHHcCh---HHHHHHHHHHHH
Confidence 9999999999999999999999999999999999 55555555544 666666999999999998 999999999999
Q ss_pred HH
Q 022321 265 AE 266 (299)
Q Consensus 265 ~~ 266 (299)
.+
T Consensus 436 ~~ 437 (496)
T KOG1192|consen 436 LR 437 (496)
T ss_pred HH
Confidence 86
No 25
>TIGR01426 MGT glycosyltransferase, MGT family. This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production.
Probab=99.96 E-value=6e-28 Score=226.84 Aligned_cols=206 Identities=19% Similarity=0.258 Sum_probs=162.2
Q ss_pred EEEEcCcccccHHHHHHHHh-cCCCEEEeCcccCCcccccccccccCCCCCcccchhhhHhhccCCCCceEEEeecCCcc
Q 022321 38 AIIFNTFDEFEHAALEVIAS-KFPNIYTVGPLPLLCKQVDETKFRSFGSSLWKEDTDCLKWLDKRDANSVVYVNYGSVTV 116 (299)
Q Consensus 38 ~~l~ns~~~LE~~~~~~~r~-~~p~v~~VGpl~~~~~~~~~~~~~~l~~~~~~~~~~~~~wl~~~~~~~vVyvsfGS~~~ 116 (299)
..+..+.+.|+++ .+ +++++++|||+...... ...|....+++++|||+|||...
T Consensus 182 ~~l~~~~~~l~~~-----~~~~~~~~~~~Gp~~~~~~~-------------------~~~~~~~~~~~~~v~vs~Gs~~~ 237 (392)
T TIGR01426 182 LNLVYTPKAFQPA-----GETFDDSFTFVGPCIGDRKE-------------------DGSWERPGDGRPVVLISLGTVFN 237 (392)
T ss_pred cEEEeCChHhCCC-----ccccCCCeEEECCCCCCccc-------------------cCCCCCCCCCCCEEEEecCccCC
Confidence 3555554444433 33 34689999997643211 12366655678999999999865
Q ss_pred cCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCcCCChhhhhhhcCCeEEEeecchhhhhcCCCcceEeeccCcchhhhh
Q 022321 117 MSEQHLTEFAWGLANSKRPFLWILRPDVVMGDSVVLPDEYFEEIKDRGLIVSWCNQEQVLLHPSVGAFLTHCGWNSTMES 196 (299)
Q Consensus 117 ~~~~~~~~l~~al~~~~~~~iw~~~~~~~~~~~~~l~~~~~~~~~~n~~v~~~~pq~~iL~~~~v~~fItHgG~~s~~Ea 196 (299)
...+.+..+++++.+.+++++|..+... ........++|+.+.+|+||.++|+++++ ||||||+||++|+
T Consensus 238 ~~~~~~~~~~~al~~~~~~~i~~~g~~~--------~~~~~~~~~~~v~~~~~~p~~~ll~~~~~--~I~hgG~~t~~Ea 307 (392)
T TIGR01426 238 NQPSFYRTCVEAFRDLDWHVVLSVGRGV--------DPADLGELPPNVEVRQWVPQLEILKKADA--FITHGGMNSTMEA 307 (392)
T ss_pred CCHHHHHHHHHHHhcCCCeEEEEECCCC--------ChhHhccCCCCeEEeCCCCHHHHHhhCCE--EEECCCchHHHHH
Confidence 5666888899999999999999886431 01112235789999999999999999988 9999999999999
Q ss_pred HhcCCcEEeccCcCCHHHHHHHHHHHhCceEEecC-CCCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHhcCCch
Q 022321 197 ICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNH-DVKRGDIEALVKEMMEGDEGKKMRQKAWEWKKKAEAATAVGGQS 275 (299)
Q Consensus 197 l~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~-~~~~~~l~~av~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gg~s 275 (299)
+++|+|+|++|...||+.||+++ ++.|+|+.+.. +++.++|.++|+++|+|+ +|+++++++++.++. .+|..
T Consensus 308 l~~G~P~v~~p~~~dq~~~a~~l-~~~g~g~~l~~~~~~~~~l~~ai~~~l~~~---~~~~~~~~l~~~~~~---~~~~~ 380 (392)
T TIGR01426 308 LFNGVPMVAVPQGADQPMTARRI-AELGLGRHLPPEEVTAEKLREAVLAVLSDP---RYAERLRKMRAEIRE---AGGAR 380 (392)
T ss_pred HHhCCCEEecCCcccHHHHHHHH-HHCCCEEEeccccCCHHHHHHHHHHHhcCH---HHHHHHHHHHHHHHH---cCCHH
Confidence 99999999999999999999999 89999999876 789999999999999988 899999999999873 34443
Q ss_pred HHHHHHHHHHH
Q 022321 276 YNNFDRLVKMV 286 (299)
Q Consensus 276 ~~~l~~~v~~l 286 (299)
...++|+.+
T Consensus 381 --~aa~~i~~~ 389 (392)
T TIGR01426 381 --RAADEIEGF 389 (392)
T ss_pred --HHHHHHHHh
Confidence 336666554
No 26
>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]
Probab=99.95 E-value=1.7e-27 Score=224.06 Aligned_cols=166 Identities=20% Similarity=0.296 Sum_probs=146.3
Q ss_pred CCCceEEEeecCCcccCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCcCCChhhhhhhcCCeEEEeecchhhhhcCCCc
Q 022321 102 DANSVVYVNYGSVTVMSEQHLTEFAWGLANSKRPFLWILRPDVVMGDSVVLPDEYFEEIKDRGLIVSWCNQEQVLLHPSV 181 (299)
Q Consensus 102 ~~~~vVyvsfGS~~~~~~~~~~~l~~al~~~~~~~iw~~~~~~~~~~~~~l~~~~~~~~~~n~~v~~~~pq~~iL~~~~v 181 (299)
.++++||+||||.... .+.+..+++++.+++.+||...+.. ..-...+|.|+.+.+|+||..+|.++++
T Consensus 235 ~d~~~vyvslGt~~~~-~~l~~~~~~a~~~l~~~vi~~~~~~----------~~~~~~~p~n~~v~~~~p~~~~l~~ad~ 303 (406)
T COG1819 235 ADRPIVYVSLGTVGNA-VELLAIVLEALADLDVRVIVSLGGA----------RDTLVNVPDNVIVADYVPQLELLPRADA 303 (406)
T ss_pred CCCCeEEEEcCCcccH-HHHHHHHHHHHhcCCcEEEEecccc----------ccccccCCCceEEecCCCHHHHhhhcCE
Confidence 3689999999999766 8889999999999999999988641 0112345889999999999999999999
Q ss_pred ceEeeccCcchhhhhHhcCCcEEeccCcCCHHHHHHHHHHHhCceEEecC-CCCHHHHHHHHHHHhcCChhHHHHHHHHH
Q 022321 182 GAFLTHCGWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNH-DVKRGDIEALVKEMMEGDEGKKMRQKAWE 260 (299)
Q Consensus 182 ~~fItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~-~~~~~~l~~av~~ll~~~~~~~~r~~a~~ 260 (299)
||||||+||++||+++|||+|++|...||+.||.++ ++.|+|+.+.. .++.+.++++|+++|+|+ .|++++++
T Consensus 304 --vI~hGG~gtt~eaL~~gvP~vv~P~~~DQ~~nA~rv-e~~G~G~~l~~~~l~~~~l~~av~~vL~~~---~~~~~~~~ 377 (406)
T COG1819 304 --VIHHGGAGTTSEALYAGVPLVVIPDGADQPLNAERV-EELGAGIALPFEELTEERLRAAVNEVLADD---SYRRAAER 377 (406)
T ss_pred --EEecCCcchHHHHHHcCCCEEEecCCcchhHHHHHH-HHcCCceecCcccCCHHHHHHHHHHHhcCH---HHHHHHHH
Confidence 999999999999999999999999999999999999 99999999987 799999999999999998 99999999
Q ss_pred HHHHHHHHHhcCCchHHHHHHHHHHHHhc
Q 022321 261 WKKKAEAATAVGGQSYNNFDRLVKMVLHQ 289 (299)
Q Consensus 261 l~~~~~~a~~~gg~s~~~l~~~v~~l~~~ 289 (299)
+++.+++. +| .+...+.++++...
T Consensus 378 ~~~~~~~~---~g--~~~~a~~le~~~~~ 401 (406)
T COG1819 378 LAEEFKEE---DG--PAKAADLLEEFARE 401 (406)
T ss_pred HHHHhhhc---cc--HHHHHHHHHHHHhc
Confidence 99999853 44 45568888876554
No 27
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.
Probab=99.93 E-value=2.9e-25 Score=208.97 Aligned_cols=157 Identities=18% Similarity=0.281 Sum_probs=131.5
Q ss_pred chhhhHhhccCCCCceEEEeecCCcccC-HHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCcCCChhhhhhhcCCeEEEee
Q 022321 91 DTDCLKWLDKRDANSVVYVNYGSVTVMS-EQHLTEFAWGLANSKRPFLWILRPDVVMGDSVVLPDEYFEEIKDRGLIVSW 169 (299)
Q Consensus 91 ~~~~~~wl~~~~~~~vVyvsfGS~~~~~-~~~~~~l~~al~~~~~~~iw~~~~~~~~~~~~~l~~~~~~~~~~n~~v~~~ 169 (299)
+.++..|++. .+++|||+|||+.... .+....+++++...+.++||+++.... .. ...++|+++.+|
T Consensus 228 ~~~~~~~~~~--~~~~v~v~~Gs~~~~~~~~~~~~~~~a~~~~~~~~i~~~g~~~~-------~~---~~~~~~v~~~~~ 295 (401)
T cd03784 228 PPELWLFLAA--GRPPVYVGFGSMVVRDPEALARLDVEAVATLGQRAILSLGWGGL-------GA---EDLPDNVRVVDF 295 (401)
T ss_pred CHHHHHHHhC--CCCcEEEeCCCCcccCHHHHHHHHHHHHHHcCCeEEEEccCccc-------cc---cCCCCceEEeCC
Confidence 3456778865 5689999999996544 456778999999899999999875421 01 234789999999
Q ss_pred cchhhhhcCCCcceEeeccCcchhhhhHhcCCcEEeccCcCCHHHHHHHHHHHhCceEEecC-CCCHHHHHHHHHHHhcC
Q 022321 170 CNQEQVLLHPSVGAFLTHCGWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNH-DVKRGDIEALVKEMMEG 248 (299)
Q Consensus 170 ~pq~~iL~~~~v~~fItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~-~~~~~~l~~av~~ll~~ 248 (299)
+||.++|.++++ ||||||+||++|++++|||+|++|+..||+.||+++ ++.|+|+.+.. .++.++|.++|++++++
T Consensus 296 ~p~~~ll~~~d~--~I~hgG~~t~~eal~~GvP~v~~P~~~dQ~~~a~~~-~~~G~g~~l~~~~~~~~~l~~al~~~l~~ 372 (401)
T cd03784 296 VPHDWLLPRCAA--VVHHGGAGTTAAALRAGVPQLVVPFFGDQPFWAARV-AELGAGPALDPRELTAERLAAALRRLLDP 372 (401)
T ss_pred CCHHHHhhhhhe--eeecCCchhHHHHHHcCCCEEeeCCCCCcHHHHHHH-HHCCCCCCCCcccCCHHHHHHHHHHHhCH
Confidence 999999999888 999999999999999999999999999999999999 99999999876 67999999999999985
Q ss_pred ChhHHHHHHHHHHHHHHH
Q 022321 249 DEGKKMRQKAWEWKKKAE 266 (299)
Q Consensus 249 ~~~~~~r~~a~~l~~~~~ 266 (299)
.++++++++.+.++
T Consensus 373 ----~~~~~~~~~~~~~~ 386 (401)
T cd03784 373 ----PSRRRAAALLRRIR 386 (401)
T ss_pred ----HHHHHHHHHHHHHH
Confidence 35566666666654
No 28
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=99.64 E-value=7.4e-15 Score=136.26 Aligned_cols=145 Identities=16% Similarity=0.168 Sum_probs=108.7
Q ss_pred CCCCceEEEeecCCcccCH-HHHHHHHHHHHcCCCCEEEEEcCCCCCCCCcCCChhhhhhhcCCeEEEeec-c-hhhhhc
Q 022321 101 RDANSVVYVNYGSVTVMSE-QHLTEFAWGLANSKRPFLWILRPDVVMGDSVVLPDEYFEEIKDRGLIVSWC-N-QEQVLL 177 (299)
Q Consensus 101 ~~~~~vVyvsfGS~~~~~~-~~~~~l~~al~~~~~~~iw~~~~~~~~~~~~~l~~~~~~~~~~n~~v~~~~-p-q~~iL~ 177 (299)
.+++++|+|..||++.... +.+.+++..+.. +++++|.++.+. + +...... .+..+.+|+ + ..++++
T Consensus 182 ~~~~~~iLv~GGS~Ga~~in~~~~~~l~~l~~-~~~vv~~~G~~~-------~-~~~~~~~-~~~~~~~f~~~~m~~~~~ 251 (352)
T PRK12446 182 SRKKPVITIMGGSLGAKKINETVREALPELLL-KYQIVHLCGKGN-------L-DDSLQNK-EGYRQFEYVHGELPDILA 251 (352)
T ss_pred CCCCcEEEEECCccchHHHHHHHHHHHHhhcc-CcEEEEEeCCch-------H-HHHHhhc-CCcEEecchhhhHHHHHH
Confidence 3467899999999975444 334445555532 488999988541 1 1111111 345566887 4 346999
Q ss_pred CCCcceEeeccCcchhhhhHhcCCcEEeccCc-----CCHHHHHHHHHHHhCceEEecC-CCCHHHHHHHHHHHhcCChh
Q 022321 178 HPSVGAFLTHCGWNSTMESICGGVPVICWPFF-----AEQQTNCRYACTTWGIGMEVNH-DVKRGDIEALVKEMMEGDEG 251 (299)
Q Consensus 178 ~~~v~~fItHgG~~s~~Eal~~GvP~i~~P~~-----~DQ~~na~~v~~~~g~G~~l~~-~~~~~~l~~av~~ll~~~~~ 251 (299)
++++ +|||||.+|+.|++++|+|+|.+|+. .||..||+.+ ++.|+|..+.. +++.+.+.+++.++++|++
T Consensus 252 ~adl--vIsr~G~~t~~E~~~~g~P~I~iP~~~~~~~~~Q~~Na~~l-~~~g~~~~l~~~~~~~~~l~~~l~~ll~~~~- 327 (352)
T PRK12446 252 ITDF--VISRAGSNAIFEFLTLQKPMLLIPLSKFASRGDQILNAESF-ERQGYASVLYEEDVTVNSLIKHVEELSHNNE- 327 (352)
T ss_pred hCCE--EEECCChhHHHHHHHcCCCEEEEcCCCCCCCchHHHHHHHH-HHCCCEEEcchhcCCHHHHHHHHHHHHcCHH-
Confidence 9998 99999999999999999999999984 4899999999 88999999876 7899999999999998752
Q ss_pred HHHHHHHHH
Q 022321 252 KKMRQKAWE 260 (299)
Q Consensus 252 ~~~r~~a~~ 260 (299)
.+++++++
T Consensus 328 -~~~~~~~~ 335 (352)
T PRK12446 328 -KYKTALKK 335 (352)
T ss_pred -HHHHHHHH
Confidence 45554444
No 29
>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=99.51 E-value=3e-13 Score=125.04 Aligned_cols=147 Identities=16% Similarity=0.218 Sum_probs=110.8
Q ss_pred CCceEEEeecCCcccCH-HHHHHHHHHHHcCCCCEEEEEcCCCCCCCCcCCChhhhhhhc-CC-eEEEeecchh-hhhcC
Q 022321 103 ANSVVYVNYGSVTVMSE-QHLTEFAWGLANSKRPFLWILRPDVVMGDSVVLPDEYFEEIK-DR-GLIVSWCNQE-QVLLH 178 (299)
Q Consensus 103 ~~~vVyvsfGS~~~~~~-~~~~~l~~al~~~~~~~iw~~~~~~~~~~~~~l~~~~~~~~~-~n-~~v~~~~pq~-~iL~~ 178 (299)
++++|+|..||++.... +.+..++..+.+ ++.+++.++.+. .+....... .+ ..+.+|..++ .+|+.
T Consensus 182 ~~~~ilV~GGS~Ga~~ln~~v~~~~~~l~~-~~~v~~~~G~~~--------~~~~~~~~~~~~~~~v~~f~~dm~~~~~~ 252 (357)
T COG0707 182 DKKTILVTGGSQGAKALNDLVPEALAKLAN-RIQVIHQTGKND--------LEELKSAYNELGVVRVLPFIDDMAALLAA 252 (357)
T ss_pred CCcEEEEECCcchhHHHHHHHHHHHHHhhh-CeEEEEEcCcch--------HHHHHHHHhhcCcEEEeeHHhhHHHHHHh
Confidence 57899999999965443 334445555544 678888887541 122222222 22 6788998765 59999
Q ss_pred CCcceEeeccCcchhhhhHhcCCcEEeccC-c---CCHHHHHHHHHHHhCceEEecC-CCCHHHHHHHHHHHhcCCh-hH
Q 022321 179 PSVGAFLTHCGWNSTMESICGGVPVICWPF-F---AEQQTNCRYACTTWGIGMEVNH-DVKRGDIEALVKEMMEGDE-GK 252 (299)
Q Consensus 179 ~~v~~fItHgG~~s~~Eal~~GvP~i~~P~-~---~DQ~~na~~v~~~~g~G~~l~~-~~~~~~l~~av~~ll~~~~-~~ 252 (299)
+++ +||++|.+|+.|.+++|+|+|.+|+ . .||..||+.+ ++.|.|..+.. ++|.+.+.+.|.+++.+++ .+
T Consensus 253 ADL--vIsRaGa~Ti~E~~a~g~P~IliP~p~~~~~~Q~~NA~~l-~~~gaa~~i~~~~lt~~~l~~~i~~l~~~~~~l~ 329 (357)
T COG0707 253 ADL--VISRAGALTIAELLALGVPAILVPYPPGADGHQEYNAKFL-EKAGAALVIRQSELTPEKLAELILRLLSNPEKLK 329 (357)
T ss_pred ccE--EEeCCcccHHHHHHHhCCCEEEeCCCCCccchHHHHHHHH-HhCCCEEEeccccCCHHHHHHHHHHHhcCHHHHH
Confidence 999 9999999999999999999999998 3 3899999999 99999999987 7899999999999998742 23
Q ss_pred HHHHHHHHH
Q 022321 253 KMRQKAWEW 261 (299)
Q Consensus 253 ~~r~~a~~l 261 (299)
.|+++++++
T Consensus 330 ~m~~~a~~~ 338 (357)
T COG0707 330 AMAENAKKL 338 (357)
T ss_pred HHHHHHHhc
Confidence 444444443
No 30
>PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B.
Probab=99.50 E-value=1.2e-15 Score=126.79 Aligned_cols=136 Identities=13% Similarity=0.218 Sum_probs=95.8
Q ss_pred eEEEeecCCcccCH-HHHHHHHHHHHc--CCCCEEEEEcCCCCCCCCcCCChhhhhhhcCCeEEEeecc-hhhhhcCCCc
Q 022321 106 VVYVNYGSVTVMSE-QHLTEFAWGLAN--SKRPFLWILRPDVVMGDSVVLPDEYFEEIKDRGLIVSWCN-QEQVLLHPSV 181 (299)
Q Consensus 106 vVyvsfGS~~~~~~-~~~~~l~~al~~--~~~~~iw~~~~~~~~~~~~~l~~~~~~~~~~n~~v~~~~p-q~~iL~~~~v 181 (299)
+|+|+.||...... +.+..++..+.. ..+.|++.++...... .... ....+.++.+.+|.+ ...++..+++
T Consensus 1 tilv~gGs~g~~~l~~~v~~~~~~~~~~~~~~~viv~~G~~~~~~----~~~~-~~~~~~~v~~~~~~~~m~~~m~~aDl 75 (167)
T PF04101_consen 1 TILVTGGSQGARDLNRLVLKILELLAEKHKNIQVIVQTGKNNYEE----LKIK-VENFNPNVKVFGFVDNMAELMAAADL 75 (167)
T ss_dssp -EEEEETTTSHHHHHCCCCCHHHHHHHHHHHCCCCCCCTTCECHH----HCCC-HCCTTCCCEEECSSSSHHHHHHHHSE
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHhhcCCCcEEEEEECCCcHHH----HHHH-HhccCCcEEEEechhhHHHHHHHcCE
Confidence 48999998853211 112223333333 2578888888552100 0001 111236789999999 6679999999
Q ss_pred ceEeeccCcchhhhhHhcCCcEEeccCcC----CHHHHHHHHHHHhCceEEecC-CCCHHHHHHHHHHHhcCC
Q 022321 182 GAFLTHCGWNSTMESICGGVPVICWPFFA----EQQTNCRYACTTWGIGMEVNH-DVKRGDIEALVKEMMEGD 249 (299)
Q Consensus 182 ~~fItHgG~~s~~Eal~~GvP~i~~P~~~----DQ~~na~~v~~~~g~G~~l~~-~~~~~~l~~av~~ll~~~ 249 (299)
+|||||.+|++|++.+|+|+|++|... +|..||..+ ++.|+|..+.. ..+.+.|.++|.+++.++
T Consensus 76 --vIs~aG~~Ti~E~l~~g~P~I~ip~~~~~~~~q~~na~~~-~~~g~~~~~~~~~~~~~~L~~~i~~l~~~~ 145 (167)
T PF04101_consen 76 --VISHAGAGTIAEALALGKPAIVIPLPGAADNHQEENAKEL-AKKGAAIMLDESELNPEELAEAIEELLSDP 145 (167)
T ss_dssp --EEECS-CHHHHHHHHCT--EEEE--TTT-T-CHHHHHHHH-HHCCCCCCSECCC-SCCCHHHHHHCHCCCH
T ss_pred --EEeCCCccHHHHHHHcCCCeeccCCCCcchHHHHHHHHHH-HHcCCccccCcccCCHHHHHHHHHHHHcCc
Confidence 999999999999999999999999988 999999999 88999999876 567899999999999876
No 31
>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1
Probab=99.46 E-value=3.9e-13 Score=122.60 Aligned_cols=121 Identities=14% Similarity=0.290 Sum_probs=97.3
Q ss_pred CCceEEEeecCCcccCHHHHHHHHHHHHcCC-CCEEEEEcCCCCCCCCcCCChhhhhhhcCCeEEEeec--chhhhhcCC
Q 022321 103 ANSVVYVNYGSVTVMSEQHLTEFAWGLANSK-RPFLWILRPDVVMGDSVVLPDEYFEEIKDRGLIVSWC--NQEQVLLHP 179 (299)
Q Consensus 103 ~~~vVyvsfGS~~~~~~~~~~~l~~al~~~~-~~~iw~~~~~~~~~~~~~l~~~~~~~~~~n~~v~~~~--pq~~iL~~~ 179 (299)
+++.|+|+||..... .++++++..+ +.|++. +... .+..++|+.+.+|. ...++|..+
T Consensus 191 ~~~~iLv~~gg~~~~------~~~~~l~~~~~~~~~v~-g~~~------------~~~~~~ni~~~~~~~~~~~~~m~~a 251 (318)
T PF13528_consen 191 DEPKILVYFGGGGPG------DLIEALKALPDYQFIVF-GPNA------------ADPRPGNIHVRPFSTPDFAELMAAA 251 (318)
T ss_pred CCCEEEEEeCCCcHH------HHHHHHHhCCCCeEEEE-cCCc------------ccccCCCEEEeecChHHHHHHHHhC
Confidence 457899999987533 5566776665 676665 4321 01126789998876 345699888
Q ss_pred CcceEeeccCcchhhhhHhcCCcEEeccC--cCCHHHHHHHHHHHhCceEEecC-CCCHHHHHHHHHHH
Q 022321 180 SVGAFLTHCGWNSTMESICGGVPVICWPF--FAEQQTNCRYACTTWGIGMEVNH-DVKRGDIEALVKEM 245 (299)
Q Consensus 180 ~v~~fItHgG~~s~~Eal~~GvP~i~~P~--~~DQ~~na~~v~~~~g~G~~l~~-~~~~~~l~~av~~l 245 (299)
++ +|||||+||++|++++|+|+|++|. +.+|..||+.+ ++.|+|+.+.. +++++.|+++|+++
T Consensus 252 d~--vIs~~G~~t~~Ea~~~g~P~l~ip~~~~~EQ~~~a~~l-~~~G~~~~~~~~~~~~~~l~~~l~~~ 317 (318)
T PF13528_consen 252 DL--VISKGGYTTISEALALGKPALVIPRPGQDEQEYNARKL-EELGLGIVLSQEDLTPERLAEFLERL 317 (318)
T ss_pred CE--EEECCCHHHHHHHHHcCCCEEEEeCCCCchHHHHHHHH-HHCCCeEEcccccCCHHHHHHHHhcC
Confidence 88 9999999999999999999999999 78999999999 99999999976 79999999998764
No 32
>TIGR00661 MJ1255 conserved hypothetical protein. This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.
Probab=99.45 E-value=5.4e-13 Score=122.28 Aligned_cols=123 Identities=15% Similarity=0.191 Sum_probs=89.5
Q ss_pred CCceEEEeecCCcccCHHHHHHHHHHHHcCCC-CEEEEEcCCCCCCCCcCCChhhhhhhcCCeEEEeecc--hhhhhcCC
Q 022321 103 ANSVVYVNYGSVTVMSEQHLTEFAWGLANSKR-PFLWILRPDVVMGDSVVLPDEYFEEIKDRGLIVSWCN--QEQVLLHP 179 (299)
Q Consensus 103 ~~~vVyvsfGS~~~~~~~~~~~l~~al~~~~~-~~iw~~~~~~~~~~~~~l~~~~~~~~~~n~~v~~~~p--q~~iL~~~ 179 (299)
+++.|+|.+|+.. ...++++|.+.+. .|+ +.... ... ..+++|+.+.+|.| ....|..+
T Consensus 187 ~~~~iLv~~g~~~------~~~l~~~l~~~~~~~~i--~~~~~------~~~----~~~~~~v~~~~~~~~~~~~~l~~a 248 (321)
T TIGR00661 187 GEDYILVYIGFEY------RYKILELLGKIANVKFV--CYSYE------VAK----NSYNENVEIRRITTDNFKELIKNA 248 (321)
T ss_pred CCCcEEEECCcCC------HHHHHHHHHhCCCeEEE--EeCCC------CCc----cccCCCEEEEECChHHHHHHHHhC
Confidence 3467888888853 2345677766553 444 22110 011 12367899999997 34577777
Q ss_pred CcceEeeccCcchhhhhHhcCCcEEeccCcC--CHHHHHHHHHHHhCceEEecC-CCCHHHHHHHHHHHhcCC
Q 022321 180 SVGAFLTHCGWNSTMESICGGVPVICWPFFA--EQQTNCRYACTTWGIGMEVNH-DVKRGDIEALVKEMMEGD 249 (299)
Q Consensus 180 ~v~~fItHgG~~s~~Eal~~GvP~i~~P~~~--DQ~~na~~v~~~~g~G~~l~~-~~~~~~l~~av~~ll~~~ 249 (299)
++ ||||||++|++|++++|+|+|++|... ||..||+.+ ++.|+|+.+.. ++ ++.+++.++++|+
T Consensus 249 d~--vI~~~G~~t~~Ea~~~g~P~l~ip~~~~~eQ~~na~~l-~~~g~~~~l~~~~~---~~~~~~~~~~~~~ 315 (321)
T TIGR00661 249 EL--VITHGGFSLISEALSLGKPLIVIPDLGQFEQGNNAVKL-EDLGCGIALEYKEL---RLLEAILDIRNMK 315 (321)
T ss_pred CE--EEECCChHHHHHHHHcCCCEEEEcCCCcccHHHHHHHH-HHCCCEEEcChhhH---HHHHHHHhccccc
Confidence 77 999999999999999999999999954 899999999 89999999875 33 5566666666666
No 33
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=99.20 E-value=3.4e-10 Score=104.92 Aligned_cols=84 Identities=15% Similarity=0.279 Sum_probs=75.1
Q ss_pred CeEEEeecc-hhhhhcCCCcceEeeccCcchhhhhHhcCCcEEeccC----cCCHHHHHHHHHHHhCceEEecC-CCCHH
Q 022321 163 RGLIVSWCN-QEQVLLHPSVGAFLTHCGWNSTMESICGGVPVICWPF----FAEQQTNCRYACTTWGIGMEVNH-DVKRG 236 (299)
Q Consensus 163 n~~v~~~~p-q~~iL~~~~v~~fItHgG~~s~~Eal~~GvP~i~~P~----~~DQ~~na~~v~~~~g~G~~l~~-~~~~~ 236 (299)
++.+.+|.. ..++++.+++ +|+|+|.++++|++++|+|+|++|. ..+|..|+..+ .+.|.|..+.. +++.+
T Consensus 236 ~v~~~g~~~~~~~~~~~~d~--~i~~~g~~~~~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~~i-~~~~~g~~~~~~~~~~~ 312 (357)
T PRK00726 236 NAEVVPFIDDMAAAYAAADL--VICRAGASTVAELAAAGLPAILVPLPHAADDHQTANARAL-VDAGAALLIPQSDLTPE 312 (357)
T ss_pred cEEEeehHhhHHHHHHhCCE--EEECCCHHHHHHHHHhCCCEEEecCCCCCcCcHHHHHHHH-HHCCCEEEEEcccCCHH
Confidence 477889984 4579999999 9999999999999999999999997 46899999999 88999999975 67899
Q ss_pred HHHHHHHHHhcCC
Q 022321 237 DIEALVKEMMEGD 249 (299)
Q Consensus 237 ~l~~av~~ll~~~ 249 (299)
.+.+++.++++|+
T Consensus 313 ~l~~~i~~ll~~~ 325 (357)
T PRK00726 313 KLAEKLLELLSDP 325 (357)
T ss_pred HHHHHHHHHHcCH
Confidence 9999999999987
No 34
>PLN02605 monogalactosyldiacylglycerol synthase
Probab=99.15 E-value=1.4e-08 Score=95.24 Aligned_cols=188 Identities=12% Similarity=0.083 Sum_probs=115.9
Q ss_pred ccCccEEEEcCcccccHHHHHHHHhc-C--CCEEEeCcccCCcccccccccccCCCCCcccchhhhHhhccCCCCceEEE
Q 022321 33 CFRSSAIIFNTFDEFEHAALEVIASK-F--PNIYTVGPLPLLCKQVDETKFRSFGSSLWKEDTDCLKWLDKRDANSVVYV 109 (299)
Q Consensus 33 ~~~~~~~l~ns~~~LE~~~~~~~r~~-~--p~v~~VGpl~~~~~~~~~~~~~~l~~~~~~~~~~~~~wl~~~~~~~vVyv 109 (299)
.+.+|.+++.| ...-+.+... . .+++.+|.-....... +. .....+.+-+.-.+++++|++
T Consensus 148 ~~~~d~~~~~s-----~~~~~~l~~~g~~~~ki~v~g~~v~~~f~~------~~-----~~~~~~r~~~gl~~~~~~il~ 211 (382)
T PLN02605 148 HKGVTRCFCPS-----EEVAKRALKRGLEPSQIRVYGLPIRPSFAR------AV-----RPKDELRRELGMDEDLPAVLL 211 (382)
T ss_pred cCCCCEEEECC-----HHHHHHHHHcCCCHHHEEEECcccCHhhcc------CC-----CCHHHHHHHcCCCCCCcEEEE
Confidence 36788999888 3333333322 2 2678887432111000 00 011122332333345677777
Q ss_pred eecCCcccCHHH-HHHHHHHHH-----cCCCCEEEEEcCCCCCCCCcCCChhhhhh-hcCCeEEEeecchh-hhhcCCCc
Q 022321 110 NYGSVTVMSEQH-LTEFAWGLA-----NSKRPFLWILRPDVVMGDSVVLPDEYFEE-IKDRGLIVSWCNQE-QVLLHPSV 181 (299)
Q Consensus 110 sfGS~~~~~~~~-~~~l~~al~-----~~~~~~iw~~~~~~~~~~~~~l~~~~~~~-~~~n~~v~~~~pq~-~iL~~~~v 181 (299)
..|+........ +..+...+. ..+..+++.++.+. .+-+.+.+. ...++.+.+|+++. .+++.+++
T Consensus 212 ~Gg~~g~~~~~~li~~l~~~~~~~~~~~~~~~~~vi~G~~~------~~~~~L~~~~~~~~v~~~G~~~~~~~l~~aaDv 285 (382)
T PLN02605 212 MGGGEGMGPLEETARALGDSLYDKNLGKPIGQVVVICGRNK------KLQSKLESRDWKIPVKVRGFVTNMEEWMGACDC 285 (382)
T ss_pred ECCCcccccHHHHHHHHHHhhccccccCCCceEEEEECCCH------HHHHHHHhhcccCCeEEEeccccHHHHHHhCCE
Confidence 777665333332 233322221 23456677776431 011111111 13467788999865 59999999
Q ss_pred ceEeeccCcchhhhhHhcCCcEEeccCcCCHH-HHHHHHHHHhCceEEecCCCCHHHHHHHHHHHhcC
Q 022321 182 GAFLTHCGWNSTMESICGGVPVICWPFFAEQQ-TNCRYACTTWGIGMEVNHDVKRGDIEALVKEMMEG 248 (299)
Q Consensus 182 ~~fItHgG~~s~~Eal~~GvP~i~~P~~~DQ~-~na~~v~~~~g~G~~l~~~~~~~~l~~av~~ll~~ 248 (299)
||+.+|.+|+.||+++|+|+|+.+....|. .|+..+ .+.|.|+.+ -+.+++.++|.+++.+
T Consensus 286 --~V~~~g~~ti~EAma~g~PvI~~~~~pgqe~gn~~~i-~~~g~g~~~---~~~~~la~~i~~ll~~ 347 (382)
T PLN02605 286 --IITKAGPGTIAEALIRGLPIILNGYIPGQEEGNVPYV-VDNGFGAFS---ESPKEIARIVAEWFGD 347 (382)
T ss_pred --EEECCCcchHHHHHHcCCCEEEecCCCccchhhHHHH-HhCCceeec---CCHHHHHHHHHHHHcC
Confidence 999999999999999999999998777775 699888 778999876 3889999999999987
No 35
>PRK13609 diacylglycerol glucosyltransferase; Provisional
Probab=99.15 E-value=1e-08 Score=95.93 Aligned_cols=133 Identities=17% Similarity=0.253 Sum_probs=97.9
Q ss_pred CCceEEEeecCCcccCHHHHHHHHHHHHcC-CCCEEEEEcCCCCCCCCcCCChhh---hhhhcCCeEEEeecchh-hhhc
Q 022321 103 ANSVVYVNYGSVTVMSEQHLTEFAWGLANS-KRPFLWILRPDVVMGDSVVLPDEY---FEEIKDRGLIVSWCNQE-QVLL 177 (299)
Q Consensus 103 ~~~vVyvsfGS~~~~~~~~~~~l~~al~~~-~~~~iw~~~~~~~~~~~~~l~~~~---~~~~~~n~~v~~~~pq~-~iL~ 177 (299)
++++|++..|+.... +.+..+++++.+. +.+++++.+.+. .+.+.+ ....++|+.+.+|+++. .+++
T Consensus 201 ~~~~il~~~G~~~~~--k~~~~li~~l~~~~~~~~viv~G~~~------~~~~~l~~~~~~~~~~v~~~g~~~~~~~l~~ 272 (380)
T PRK13609 201 NKKILLIMAGAHGVL--GNVKELCQSLMSVPDLQVVVVCGKNE------ALKQSLEDLQETNPDALKVFGYVENIDELFR 272 (380)
T ss_pred CCcEEEEEcCCCCCC--cCHHHHHHHHhhCCCcEEEEEeCCCH------HHHHHHHHHHhcCCCcEEEEechhhHHHHHH
Confidence 456777777887532 2345667777653 567777766331 011111 12234578899999875 6999
Q ss_pred CCCcceEeeccCcchhhhhHhcCCcEEec-cCcCCHHHHHHHHHHHhCceEEecCCCCHHHHHHHHHHHhcCC
Q 022321 178 HPSVGAFLTHCGWNSTMESICGGVPVICW-PFFAEQQTNCRYACTTWGIGMEVNHDVKRGDIEALVKEMMEGD 249 (299)
Q Consensus 178 ~~~v~~fItHgG~~s~~Eal~~GvP~i~~-P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~l~~av~~ll~~~ 249 (299)
.+++ ||+..|..++.||+++|+|+|+. |..+.+..|+..+ ++.|+|+... +.+++.++|.++++|+
T Consensus 273 ~aD~--~v~~~gg~t~~EA~a~g~PvI~~~~~~g~~~~n~~~~-~~~G~~~~~~---~~~~l~~~i~~ll~~~ 339 (380)
T PRK13609 273 VTSC--MITKPGGITLSEAAALGVPVILYKPVPGQEKENAMYF-ERKGAAVVIR---DDEEVFAKTEALLQDD 339 (380)
T ss_pred hccE--EEeCCCchHHHHHHHhCCCEEECCCCCCcchHHHHHH-HhCCcEEEEC---CHHHHHHHHHHHHCCH
Confidence 9998 99999989999999999999995 6667778899888 7889988654 7899999999999886
No 36
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.14 E-value=1.3e-09 Score=100.47 Aligned_cols=136 Identities=13% Similarity=0.133 Sum_probs=97.6
Q ss_pred CCceEEEeecCCcccCH-HHHHHHHHHHHcCCCCEEEEEcCCCCCCCCcCCChhhhhhh---cCCeEEEeec-chhhhhc
Q 022321 103 ANSVVYVNYGSVTVMSE-QHLTEFAWGLANSKRPFLWILRPDVVMGDSVVLPDEYFEEI---KDRGLIVSWC-NQEQVLL 177 (299)
Q Consensus 103 ~~~vVyvsfGS~~~~~~-~~~~~l~~al~~~~~~~iw~~~~~~~~~~~~~l~~~~~~~~---~~n~~v~~~~-pq~~iL~ 177 (299)
++++|++..|+...... +.+..++..+.+.+..+++.++.. ..+.+.+.+ .+|+.+.+|. +...+|+
T Consensus 180 ~~~~i~~~~g~~~~~~~~~~l~~a~~~l~~~~~~~~~i~G~g--------~~~~l~~~~~~~~~~v~~~g~~~~~~~~l~ 251 (350)
T cd03785 180 GKPTLLVFGGSQGARAINEAVPEALAELLRKRLQVIHQTGKG--------DLEEVKKAYEELGVNYEVFPFIDDMAAAYA 251 (350)
T ss_pred CCeEEEEECCcHhHHHHHHHHHHHHHHhhccCeEEEEEcCCc--------cHHHHHHHHhccCCCeEEeehhhhHHHHHH
Confidence 45567676666642221 223344445544445566666643 112222222 3688899998 4556999
Q ss_pred CCCcceEeeccCcchhhhhHhcCCcEEeccC----cCCHHHHHHHHHHHhCceEEecC-CCCHHHHHHHHHHHhcCC
Q 022321 178 HPSVGAFLTHCGWNSTMESICGGVPVICWPF----FAEQQTNCRYACTTWGIGMEVNH-DVKRGDIEALVKEMMEGD 249 (299)
Q Consensus 178 ~~~v~~fItHgG~~s~~Eal~~GvP~i~~P~----~~DQ~~na~~v~~~~g~G~~l~~-~~~~~~l~~av~~ll~~~ 249 (299)
.+++ +|+++|.++++||+++|+|+|+.|. ..+|..|+..+ .+.|.|+.+.. +.+.+++.++++++++++
T Consensus 252 ~ad~--~v~~sg~~t~~Eam~~G~Pvv~~~~~~~~~~~~~~~~~~l-~~~g~g~~v~~~~~~~~~l~~~i~~ll~~~ 325 (350)
T cd03785 252 AADL--VISRAGASTVAELAALGLPAILIPLPYAADDHQTANARAL-VKAGAAVLIPQEELTPERLAAALLELLSDP 325 (350)
T ss_pred hcCE--EEECCCHhHHHHHHHhCCCEEEeecCCCCCCcHHHhHHHH-HhCCCEEEEecCCCCHHHHHHHHHHHhcCH
Confidence 9998 9999999999999999999999986 46788999999 77899999875 368999999999999876
No 37
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=99.09 E-value=6.7e-09 Score=97.84 Aligned_cols=144 Identities=14% Similarity=0.218 Sum_probs=101.2
Q ss_pred CCceEEEeecCCcccCHHHHHHHHHHHH-c-CCCCEEEEEcCCCCCCCCcCCChhhhhhh--cCCeEEEeecchh-hhhc
Q 022321 103 ANSVVYVNYGSVTVMSEQHLTEFAWGLA-N-SKRPFLWILRPDVVMGDSVVLPDEYFEEI--KDRGLIVSWCNQE-QVLL 177 (299)
Q Consensus 103 ~~~vVyvsfGS~~~~~~~~~~~l~~al~-~-~~~~~iw~~~~~~~~~~~~~l~~~~~~~~--~~n~~v~~~~pq~-~iL~ 177 (299)
++++|++..|+.+. .+.+..+++++. . .+.+++++.+.+. .+-+.+.+.. .+++.+.+|.++. .+++
T Consensus 201 ~~~~ilv~~G~lg~--~k~~~~li~~~~~~~~~~~~vvv~G~~~------~l~~~l~~~~~~~~~v~~~G~~~~~~~~~~ 272 (391)
T PRK13608 201 DKQTILMSAGAFGV--SKGFDTMITDILAKSANAQVVMICGKSK------ELKRSLTAKFKSNENVLILGYTKHMNEWMA 272 (391)
T ss_pred CCCEEEEECCCccc--chhHHHHHHHHHhcCCCceEEEEcCCCH------HHHHHHHHHhccCCCeEEEeccchHHHHHH
Confidence 56788888888752 133445555543 2 3567777666431 0111222211 3578888999765 5999
Q ss_pred CCCcceEeeccCcchhhhhHhcCCcEEec-cCcCCHHHHHHHHHHHhCceEEecCCCCHHHHHHHHHHHhcCCh-hHHHH
Q 022321 178 HPSVGAFLTHCGWNSTMESICGGVPVICW-PFFAEQQTNCRYACTTWGIGMEVNHDVKRGDIEALVKEMMEGDE-GKKMR 255 (299)
Q Consensus 178 ~~~v~~fItHgG~~s~~Eal~~GvP~i~~-P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~l~~av~~ll~~~~-~~~~r 255 (299)
.+++ ||+..|..|+.||+++|+|+|+. |.-++|..|+..+ .+.|+|+... +.+++.++|.++++|++ .++|+
T Consensus 273 ~aDl--~I~k~gg~tl~EA~a~G~PvI~~~~~pgqe~~N~~~~-~~~G~g~~~~---~~~~l~~~i~~ll~~~~~~~~m~ 346 (391)
T PRK13608 273 SSQL--MITKPGGITISEGLARCIPMIFLNPAPGQELENALYF-EEKGFGKIAD---TPEEAIKIVASLTNGNEQLTNMI 346 (391)
T ss_pred hhhE--EEeCCchHHHHHHHHhCCCEEECCCCCCcchhHHHHH-HhCCcEEEeC---CHHHHHHHHHHHhcCHHHHHHHH
Confidence 9999 99999889999999999999998 6666677899999 8999998765 78899999999998762 12344
Q ss_pred HHHHH
Q 022321 256 QKAWE 260 (299)
Q Consensus 256 ~~a~~ 260 (299)
+++++
T Consensus 347 ~~~~~ 351 (391)
T PRK13608 347 STMEQ 351 (391)
T ss_pred HHHHH
Confidence 44443
No 38
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=98.92 E-value=2e-08 Score=92.36 Aligned_cols=76 Identities=16% Similarity=0.331 Sum_probs=66.3
Q ss_pred chhhhhcCCCcceEeeccCcchhhhhHhcCCcEEeccCc---CCHHHHHHHHHHHhCceEEecC-CCCHHHHHHHHHHHh
Q 022321 171 NQEQVLLHPSVGAFLTHCGWNSTMESICGGVPVICWPFF---AEQQTNCRYACTTWGIGMEVNH-DVKRGDIEALVKEMM 246 (299)
Q Consensus 171 pq~~iL~~~~v~~fItHgG~~s~~Eal~~GvP~i~~P~~---~DQ~~na~~v~~~~g~G~~l~~-~~~~~~l~~av~~ll 246 (299)
+...+|+.+++ ||+++|.++++||+++|+|+|++|.- .+|..|+..+ ...+.|..+.. +.+.+++.+++.+++
T Consensus 243 ~~~~~l~~ad~--~v~~~g~~~l~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~i-~~~~~G~~~~~~~~~~~~l~~~i~~ll 319 (348)
T TIGR01133 243 NMAAAYAAADL--VISRAGASTVAELAAAGVPAILIPYPYAADDQYYNAKFL-EDLGAGLVIRQKELLPEKLLEALLKLL 319 (348)
T ss_pred CHHHHHHhCCE--EEECCChhHHHHHHHcCCCEEEeeCCCCccchhhHHHHH-HHCCCEEEEecccCCHHHHHHHHHHHH
Confidence 45679999998 99999988999999999999999863 4678899988 78899998865 568999999999999
Q ss_pred cCC
Q 022321 247 EGD 249 (299)
Q Consensus 247 ~~~ 249 (299)
+|+
T Consensus 320 ~~~ 322 (348)
T TIGR01133 320 LDP 322 (348)
T ss_pred cCH
Confidence 887
No 39
>TIGR03492 conserved hypothetical protein. This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown.
Probab=98.88 E-value=1.5e-07 Score=88.78 Aligned_cols=179 Identities=14% Similarity=0.097 Sum_probs=111.8
Q ss_pred ccCccEEEEcCcccccHHHHHHHHhcCCCEEEeC-cccCCcccccccccccCCCCCcccchhhhHhhccCCCCceEEEee
Q 022321 33 CFRSSAIIFNTFDEFEHAALEVIASKFPNIYTVG-PLPLLCKQVDETKFRSFGSSLWKEDTDCLKWLDKRDANSVVYVNY 111 (299)
Q Consensus 33 ~~~~~~~l~ns~~~LE~~~~~~~r~~~p~v~~VG-pl~~~~~~~~~~~~~~l~~~~~~~~~~~~~wl~~~~~~~vVyvsf 111 (299)
.+.|+.+++.. ...-++++...-++.+|| |+...-.. ... .-+ .+++++|.+--
T Consensus 158 ~~~a~~v~~~~-----~~t~~~l~~~g~k~~~vGnPv~d~l~~---------------~~~---~~l--~~~~~~lllLp 212 (396)
T TIGR03492 158 SRRCLAVFVRD-----RLTARDLRRQGVRASYLGNPMMDGLEP---------------PER---KPL--LTGRFRIALLP 212 (396)
T ss_pred chhhCEEeCCC-----HHHHHHHHHCCCeEEEeCcCHHhcCcc---------------ccc---ccc--CCCCCEEEEEC
Confidence 35777777777 333445555444899999 44321110 000 012 22456788888
Q ss_pred cCCcccCHHHHHHHHHHHHc----CCCCEEEEEcCCCCCCCCcCCChhhhhhh-------------------cCCeEEEe
Q 022321 112 GSVTVMSEQHLTEFAWGLAN----SKRPFLWILRPDVVMGDSVVLPDEYFEEI-------------------KDRGLIVS 168 (299)
Q Consensus 112 GS~~~~~~~~~~~l~~al~~----~~~~~iw~~~~~~~~~~~~~l~~~~~~~~-------------------~~n~~v~~ 168 (299)
||...--...+..+++++.. .+..|++.+.+... .+.+...+ .+++.+..
T Consensus 213 GSR~ae~~~~lp~~l~al~~L~~~~~~~~v~~~~~~~~-------~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~v~~ 285 (396)
T TIGR03492 213 GSRPPEAYRNLKLLLRALEALPDSQPFVFLAAIVPSLS-------LEKLQAILEDLGWQLEGSSEDQTSLFQKGTLEVLL 285 (396)
T ss_pred CCCHHHHHccHHHHHHHHHHHhhCCCeEEEEEeCCCCC-------HHHHHHHHHhcCceecCCccccchhhccCceEEEe
Confidence 99843222333445555443 36788888743210 01111111 12245555
Q ss_pred ecch-hhhhcCCCcceEeeccCcchhhhhHhcCCcEEeccCcCCHHHHHHHHHHHh----CceEEecCCCCHHHHHHHHH
Q 022321 169 WCNQ-EQVLLHPSVGAFLTHCGWNSTMESICGGVPVICWPFFAEQQTNCRYACTTW----GIGMEVNHDVKRGDIEALVK 243 (299)
Q Consensus 169 ~~pq-~~iL~~~~v~~fItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~----g~G~~l~~~~~~~~l~~av~ 243 (299)
+..+ ..+++.+++ +|+..|..| .|++..|+|+|.+|+-..|. |+..+ +.. |.++.+. +.+.+.+.+++.
T Consensus 286 ~~~~~~~~l~~ADl--vI~rSGt~T-~E~a~lg~P~Ilip~~~~q~-na~~~-~~~~~l~g~~~~l~-~~~~~~l~~~l~ 359 (396)
T TIGR03492 286 GRGAFAEILHWADL--GIAMAGTAT-EQAVGLGKPVIQLPGKGPQF-TYGFA-EAQSRLLGGSVFLA-SKNPEQAAQVVR 359 (396)
T ss_pred chHhHHHHHHhCCE--EEECcCHHH-HHHHHhCCCEEEEeCCCCHH-HHHHH-HhhHhhcCCEEecC-CCCHHHHHHHHH
Confidence 5543 569999999 999999766 99999999999999877786 98776 553 6666665 456699999999
Q ss_pred HHhcCC
Q 022321 244 EMMEGD 249 (299)
Q Consensus 244 ~ll~~~ 249 (299)
++++|+
T Consensus 360 ~ll~d~ 365 (396)
T TIGR03492 360 QLLADP 365 (396)
T ss_pred HHHcCH
Confidence 999886
No 40
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=98.80 E-value=3.1e-08 Score=89.15 Aligned_cols=103 Identities=16% Similarity=0.157 Sum_probs=76.8
Q ss_pred ceEEEeecCCcccCHHHHHHHHHHHHcC--CCCEEEEEcCCCCCCCCcCCChhhhhh--hcCCeEEEeecchh-hhhcCC
Q 022321 105 SVVYVNYGSVTVMSEQHLTEFAWGLANS--KRPFLWILRPDVVMGDSVVLPDEYFEE--IKDRGLIVSWCNQE-QVLLHP 179 (299)
Q Consensus 105 ~vVyvsfGS~~~~~~~~~~~l~~al~~~--~~~~iw~~~~~~~~~~~~~l~~~~~~~--~~~n~~v~~~~pq~-~iL~~~ 179 (299)
+.|+|+||...... ....++++|.+. +.++.+++++.. ...+.+.+. ..+|+.+..|+++. .+|..+
T Consensus 171 ~~iLi~~GG~d~~~--~~~~~l~~l~~~~~~~~i~vv~G~~~------~~~~~l~~~~~~~~~i~~~~~~~~m~~lm~~a 242 (279)
T TIGR03590 171 RRVLVSFGGADPDN--LTLKLLSALAESQINISITLVTGSSN------PNLDELKKFAKEYPNIILFIDVENMAELMNEA 242 (279)
T ss_pred CeEEEEeCCcCCcC--HHHHHHHHHhccccCceEEEEECCCC------cCHHHHHHHHHhCCCEEEEeCHHHHHHHHHHC
Confidence 56899999664322 345566777653 567788887542 111222221 24588899999986 699999
Q ss_pred CcceEeeccCcchhhhhHhcCCcEEeccCcCCHHHHHHH
Q 022321 180 SVGAFLTHCGWNSTMESICGGVPVICWPFFAEQQTNCRY 218 (299)
Q Consensus 180 ~v~~fItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~ 218 (299)
++ +||+|| +|++|+++.|+|+|++|...+|..||+.
T Consensus 243 Dl--~Is~~G-~T~~E~~a~g~P~i~i~~~~nQ~~~a~~ 278 (279)
T TIGR03590 243 DL--AIGAAG-STSWERCCLGLPSLAICLAENQQSNSQQ 278 (279)
T ss_pred CE--EEECCc-hHHHHHHHcCCCEEEEEecccHHHHhhh
Confidence 99 999999 9999999999999999999999999975
No 41
>COG4671 Predicted glycosyl transferase [General function prediction only]
Probab=98.74 E-value=4.7e-07 Score=81.77 Aligned_cols=183 Identities=12% Similarity=0.094 Sum_probs=124.3
Q ss_pred ccEEEEcCcccccHHHHHH--HHhcCCCEEEeCcccCCcccccccccccCCCCCcccchhhhHhhccCCCCceEEEeecC
Q 022321 36 SSAIIFNTFDEFEHAALEV--IASKFPNIYTVGPLPLLCKQVDETKFRSFGSSLWKEDTDCLKWLDKRDANSVVYVNYGS 113 (299)
Q Consensus 36 ~~~~l~ns~~~LE~~~~~~--~r~~~p~v~~VGpl~~~~~~~~~~~~~~l~~~~~~~~~~~~~wl~~~~~~~vVyvsfGS 113 (299)
-|.+++-..|++-.+.-.+ ......++.|+|=+ ..+-... ++| |... +++..|+||-|-
T Consensus 168 yD~V~v~GdP~f~d~~~~~~~~~~i~~k~~ytG~v-q~~~~~~-----~~p------------~~~~-pE~~~Ilvs~GG 228 (400)
T COG4671 168 YDLVLVYGDPDFYDPLTEFPFAPAIRAKMRYTGFV-QRSLPHL-----PLP------------PHEA-PEGFDILVSVGG 228 (400)
T ss_pred heEEEEecCccccChhhcCCccHhhhhheeEeEEe-eccCcCC-----CCC------------CcCC-CccceEEEecCC
Confidence 3778887766655442222 11122479999987 2221100 111 1111 344568888776
Q ss_pred CcccCHHHHHHHHHHHHc-CCCC--EEEEEcCCCCCCCCcCCChhhhhhh----c--CCeEEEeecchh-hhhcCCCcce
Q 022321 114 VTVMSEQHLTEFAWGLAN-SKRP--FLWILRPDVVMGDSVVLPDEYFEEI----K--DRGLIVSWCNQE-QVLLHPSVGA 183 (299)
Q Consensus 114 ~~~~~~~~~~~l~~al~~-~~~~--~iw~~~~~~~~~~~~~l~~~~~~~~----~--~n~~v~~~~pq~-~iL~~~~v~~ 183 (299)
.. ...+.+...+.|-.. .+.+ .+.++++. +|....+++ + +++.+..|-.+. .++..++.
T Consensus 229 G~-dG~eLi~~~l~A~~~l~~l~~~~~ivtGP~--------MP~~~r~~l~~~A~~~p~i~I~~f~~~~~~ll~gA~~-- 297 (400)
T COG4671 229 GA-DGAELIETALAAAQLLAGLNHKWLIVTGPF--------MPEAQRQKLLASAPKRPHISIFEFRNDFESLLAGARL-- 297 (400)
T ss_pred Ch-hhHHHHHHHHHHhhhCCCCCcceEEEeCCC--------CCHHHHHHHHHhcccCCCeEEEEhhhhHHHHHHhhhe--
Confidence 53 345666666665543 3443 55555654 555443332 3 678888998765 58888888
Q ss_pred EeeccCcchhhhhHhcCCcEEeccCcC---CHHHHHHHHHHHhCceEEecC-CCCHHHHHHHHHHHhcCC
Q 022321 184 FLTHCGWNSTMESICGGVPVICWPFFA---EQQTNCRYACTTWGIGMEVNH-DVKRGDIEALVKEMMEGD 249 (299)
Q Consensus 184 fItHgG~~s~~Eal~~GvP~i~~P~~~---DQ~~na~~v~~~~g~G~~l~~-~~~~~~l~~av~~ll~~~ 249 (299)
+|+-||+||++|-+++|+|.+++|... +|-.-|.|+ +++|+.-.+.. ++++..+.+++...++-+
T Consensus 298 vVSm~GYNTvCeILs~~k~aLivPr~~p~eEQliRA~Rl-~~LGL~dvL~pe~lt~~~La~al~~~l~~P 366 (400)
T COG4671 298 VVSMGGYNTVCEILSFGKPALIVPRAAPREEQLIRAQRL-EELGLVDVLLPENLTPQNLADALKAALARP 366 (400)
T ss_pred eeecccchhhhHHHhCCCceEEeccCCCcHHHHHHHHHH-HhcCcceeeCcccCChHHHHHHHHhcccCC
Confidence 999999999999999999999999854 899999999 99998888876 899999999999998843
No 42
>TIGR00215 lpxB lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA
Probab=98.64 E-value=2.8e-07 Score=86.72 Aligned_cols=165 Identities=10% Similarity=0.009 Sum_probs=102.9
Q ss_pred CCCCceEEEeecCCcccCHHHHHHHHHHHHc---C--CCCEEEEEcCCCCCCCCcCCChhhhhhh--cCCeEEEeecchh
Q 022321 101 RDANSVVYVNYGSVTVMSEQHLTEFAWGLAN---S--KRPFLWILRPDVVMGDSVVLPDEYFEEI--KDRGLIVSWCNQE 173 (299)
Q Consensus 101 ~~~~~vVyvsfGS~~~~~~~~~~~l~~al~~---~--~~~~iw~~~~~~~~~~~~~l~~~~~~~~--~~n~~v~~~~pq~ 173 (299)
.+++++|.+..||....-...+..+++++.. . +.++++....... ...+ +.+.+.. +.++.+..+ ...
T Consensus 188 ~~~~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~~~~p~~~~vi~~~~~~~---~~~~-~~~~~~~~~~~~v~~~~~-~~~ 262 (385)
T TIGR00215 188 DHNGETLALLPGSRGSEVEKLFPLFLKAAQLLEQQEPDLRRVLPVVNFKR---RLQF-EQIKAEYGPDLQLHLIDG-DAR 262 (385)
T ss_pred CCCCCEEEEECCCCHHHHHHhHHHHHHHHHHHHHhCCCeEEEEEeCCchh---HHHH-HHHHHHhCCCCcEEEECc-hHH
Confidence 3456788888888753222334445544432 2 3455554432210 0000 1112222 122333322 344
Q ss_pred hhhcCCCcceEeeccCcchhhhhHhcCCcEEec----cCcC---------CHHHHHHHHHHHhCceEEecC-CCCHHHHH
Q 022321 174 QVLLHPSVGAFLTHCGWNSTMESICGGVPVICW----PFFA---------EQQTNCRYACTTWGIGMEVNH-DVKRGDIE 239 (299)
Q Consensus 174 ~iL~~~~v~~fItHgG~~s~~Eal~~GvP~i~~----P~~~---------DQ~~na~~v~~~~g~G~~l~~-~~~~~~l~ 239 (299)
.+++.+++ ||+-.|..|+ |++++|+|+|++ |+.. .|..|+..+ ...++...+.. ++|++.|.
T Consensus 263 ~~l~aADl--~V~~SGt~tl-Ea~a~G~P~Vv~yk~~pl~~~~~~~~~~~~~~~~~nil-~~~~~~pel~q~~~~~~~l~ 338 (385)
T TIGR00215 263 KAMFAADA--ALLASGTAAL-EAALIKTPMVVGYRMKPLTFLIARRLVKTDYISLPNIL-ANRLLVPELLQEECTPHPLA 338 (385)
T ss_pred HHHHhCCE--EeecCCHHHH-HHHHcCCCEEEEEcCCHHHHHHHHHHHcCCeeeccHHh-cCCccchhhcCCCCCHHHHH
Confidence 68988888 9999999988 999999999999 7622 266789888 77788888764 89999999
Q ss_pred HHHHHHhcCC----h-hHHHHHHHHHHHHHHHHHHhcCCchHHH
Q 022321 240 ALVKEMMEGD----E-GKKMRQKAWEWKKKAEAATAVGGQSYNN 278 (299)
Q Consensus 240 ~av~~ll~~~----~-~~~~r~~a~~l~~~~~~a~~~gg~s~~~ 278 (299)
+.+.++++|+ + .+++++...++++.+ .++|.+.+.
T Consensus 339 ~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~l----~~~~~~~~~ 378 (385)
T TIGR00215 339 IALLLLLENGLKAYKEMHRERQFFEELRQRI----YCNADSERA 378 (385)
T ss_pred HHHHHHhcCCcccHHHHHHHHHHHHHHHHHh----cCCCHHHHH
Confidence 9999999987 3 245555555555554 445565543
No 43
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=98.63 E-value=4.4e-07 Score=84.72 Aligned_cols=73 Identities=8% Similarity=0.014 Sum_probs=51.2
Q ss_pred hhhhcCCCcceEeeccCcchhhhhHhcCCcEEeccCcCC--------HHHH-----HHHHHHHhCceEEecC-CCCHHHH
Q 022321 173 EQVLLHPSVGAFLTHCGWNSTMESICGGVPVICWPFFAE--------QQTN-----CRYACTTWGIGMEVNH-DVKRGDI 238 (299)
Q Consensus 173 ~~iL~~~~v~~fItHgG~~s~~Eal~~GvP~i~~P~~~D--------Q~~n-----a~~v~~~~g~G~~l~~-~~~~~~l 238 (299)
..+++.+++ +|+.+|.+++ |++++|+|+|+.|-... |..| +..+ ...+++..+.. ..+.+++
T Consensus 256 ~~~~~~aDl--~v~~sG~~~l-Ea~a~G~PvI~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~l 331 (380)
T PRK00025 256 REAMAAADA--ALAASGTVTL-ELALLKVPMVVGYKVSPLTFWIAKRLVKVPYVSLPNLL-AGRELVPELLQEEATPEKL 331 (380)
T ss_pred HHHHHhCCE--EEECccHHHH-HHHHhCCCEEEEEccCHHHHHHHHHHHcCCeeehHHHh-cCCCcchhhcCCCCCHHHH
Confidence 568999999 9999998887 99999999999864321 1111 1222 22222222322 6789999
Q ss_pred HHHHHHHhcCC
Q 022321 239 EALVKEMMEGD 249 (299)
Q Consensus 239 ~~av~~ll~~~ 249 (299)
.+++.++++|+
T Consensus 332 ~~~i~~ll~~~ 342 (380)
T PRK00025 332 ARALLPLLADG 342 (380)
T ss_pred HHHHHHHhcCH
Confidence 99999999987
No 44
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=98.41 E-value=8.6e-05 Score=67.51 Aligned_cols=129 Identities=12% Similarity=0.100 Sum_probs=85.9
Q ss_pred CceEEEeecCCcc-cCHHHHHHHHHHHHcC-CCCEEEEEcCCCCCCCCcCCChhhhhhhcCCeEEEeecchhh---hhcC
Q 022321 104 NSVVYVNYGSVTV-MSEQHLTEFAWGLANS-KRPFLWILRPDVVMGDSVVLPDEYFEEIKDRGLIVSWCNQEQ---VLLH 178 (299)
Q Consensus 104 ~~vVyvsfGS~~~-~~~~~~~~l~~al~~~-~~~~iw~~~~~~~~~~~~~l~~~~~~~~~~n~~v~~~~pq~~---iL~~ 178 (299)
++.+++..|+... ...+.+.+++..+... +..+++.-... ....+ .....|+.+.+|+++.+ +++.
T Consensus 196 ~~~~i~~~G~~~~~k~~~~~i~~~~~l~~~~~~~l~i~G~~~--------~~~~~-~~~~~~v~~~g~~~~~~~~~~~~~ 266 (364)
T cd03814 196 DRPVLLYVGRLAPEKNLEALLDADLPLRRRPPVRLVIVGDGP--------ARARL-EARYPNVHFLGFLDGEELAAAYAS 266 (364)
T ss_pred CCeEEEEEeccccccCHHHHHHHHHHhhhcCCceEEEEeCCc--------hHHHH-hccCCcEEEEeccCHHHHHHHHHh
Confidence 3456677787642 3334455555555432 45555443221 11111 13357889999998765 8989
Q ss_pred CCcceEeeccC----cchhhhhHhcCCcEEeccCcCCHHHHHHHHHHHhCceEEecCCCCHHHHHHHHHHHhcCC
Q 022321 179 PSVGAFLTHCG----WNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVKRGDIEALVKEMMEGD 249 (299)
Q Consensus 179 ~~v~~fItHgG----~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~l~~av~~ll~~~ 249 (299)
+++ +|..+. .++++||+++|+|+|+.+..+ +...+ +..+.|..+. .-+.+++.+++.+++.|+
T Consensus 267 ~d~--~l~~s~~e~~~~~~lEa~a~g~PvI~~~~~~----~~~~i-~~~~~g~~~~-~~~~~~l~~~i~~l~~~~ 333 (364)
T cd03814 267 ADV--FVFPSRTETFGLVVLEAMASGLPVVAPDAGG----PADIV-TDGENGLLVE-PGDAEAFAAALAALLADP 333 (364)
T ss_pred CCE--EEECcccccCCcHHHHHHHcCCCEEEcCCCC----chhhh-cCCcceEEcC-CCCHHHHHHHHHHHHcCH
Confidence 988 776654 478999999999999988654 44455 6668888776 467888999999999987
No 45
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=98.31 E-value=0.00012 Score=69.26 Aligned_cols=112 Identities=14% Similarity=0.148 Sum_probs=74.2
Q ss_pred cCCeEEEeecchhh---hhcCCCcceEeeccC----cchhhhhHhcCCcEEeccCcCCHHHHHHHHHHHhCceEEecCCC
Q 022321 161 KDRGLIVSWCNQEQ---VLLHPSVGAFLTHCG----WNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDV 233 (299)
Q Consensus 161 ~~n~~v~~~~pq~~---iL~~~~v~~fItHgG----~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~ 233 (299)
.+++.+.+|+++.+ ++..+++.+||...- -++++||+++|+|+|+....+ ....+ .+-+.|..+...-
T Consensus 288 ~~~V~f~G~v~~~e~~~~~~~~~~~v~v~~S~~Eg~p~~llEAma~G~PVIas~vgg----~~e~i-~~~~~G~l~~~~~ 362 (407)
T cd04946 288 NISVNFTGELSNSEVYKLYKENPVDVFVNLSESEGLPVSIMEAMSFGIPVIATNVGG----TPEIV-DNGGNGLLLSKDP 362 (407)
T ss_pred CceEEEecCCChHHHHHHHhhcCCCEEEeCCccccccHHHHHHHHcCCCEEeCCCCC----cHHHh-cCCCcEEEeCCCC
Confidence 35678889999764 555544445765443 468999999999999866433 44555 5545888886555
Q ss_pred CHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHH
Q 022321 234 KRGDIEALVKEMMEGDEGKKMRQKAWEWKKKAEAATAVGGQSYNNFDRLV 283 (299)
Q Consensus 234 ~~~~l~~av~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gg~s~~~l~~~v 283 (299)
+.+++.++|.++++|++ .+ .++++..++.+.+.-+......+|+
T Consensus 363 ~~~~la~~I~~ll~~~~---~~---~~m~~~ar~~~~~~f~~~~~~~~~~ 406 (407)
T cd04946 363 TPNELVSSLSKFIDNEE---EY---QTMREKAREKWEENFNASKNYREFA 406 (407)
T ss_pred CHHHHHHHHHHHHhCHH---HH---HHHHHHHHHHHHHHcCHHHhHHHhc
Confidence 88999999999998762 22 2233444444444556655555553
No 46
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=98.22 E-value=4.3e-05 Score=70.34 Aligned_cols=126 Identities=11% Similarity=0.109 Sum_probs=85.2
Q ss_pred EEeecCCcccCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCcCCChhhhhhhcCCeEEEeecchh---hhhcCCCcceE
Q 022321 108 YVNYGSVTVMSEQHLTEFAWGLANSKRPFLWILRPDVVMGDSVVLPDEYFEEIKDRGLIVSWCNQE---QVLLHPSVGAF 184 (299)
Q Consensus 108 yvsfGS~~~~~~~~~~~l~~al~~~~~~~iw~~~~~~~~~~~~~l~~~~~~~~~~n~~v~~~~pq~---~iL~~~~v~~f 184 (299)
++..|+.. ..+....+++++...+.+++++-.+. ..+.+.+...+|+.+.+++|+. .+++.+++-++
T Consensus 198 il~~G~~~--~~K~~~~li~a~~~~~~~l~ivG~g~--------~~~~l~~~~~~~V~~~g~~~~~~~~~~~~~ad~~v~ 267 (351)
T cd03804 198 YLSVGRLV--PYKRIDLAIEAFNKLGKRLVVIGDGP--------ELDRLRAKAGPNVTFLGRVSDEELRDLYARARAFLF 267 (351)
T ss_pred EEEEEcCc--cccChHHHHHHHHHCCCcEEEEECCh--------hHHHHHhhcCCCEEEecCCCHHHHHHHHHhCCEEEE
Confidence 44567764 22345667788877777766654322 1123333456899999999974 47889998333
Q ss_pred eeccCc-chhhhhHhcCCcEEeccCcCCHHHHHHHHHHHhCceEEecCCCCHHHHHHHHHHHhcCC
Q 022321 185 LTHCGW-NSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVKRGDIEALVKEMMEGD 249 (299)
Q Consensus 185 ItHgG~-~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~l~~av~~ll~~~ 249 (299)
-+.-|. .+++||+++|+|+|+....+ ....+ .+-+.|..+. .-+.+++.++|.++++|+
T Consensus 268 ps~e~~g~~~~Eama~G~Pvi~~~~~~----~~e~i-~~~~~G~~~~-~~~~~~la~~i~~l~~~~ 327 (351)
T cd03804 268 PAEEDFGIVPVEAMASGTPVIAYGKGG----ALETV-IDGVTGILFE-EQTVESLAAAVERFEKNE 327 (351)
T ss_pred CCcCCCCchHHHHHHcCCCEEEeCCCC----Cccee-eCCCCEEEeC-CCCHHHHHHHHHHHHhCc
Confidence 344444 46789999999999986543 23334 4556788776 357888999999999886
No 47
>KOG3349 consensus Predicted glycosyltransferase [General function prediction only]
Probab=98.16 E-value=9.5e-06 Score=64.77 Aligned_cols=115 Identities=14% Similarity=0.064 Sum_probs=76.1
Q ss_pred ceEEEeecCCcccCH---HHHHHHHHHHHcCCC-CEEEEEcCCCCCCCCcCCChhhhh-hhcCCe--EEEeecch-hhhh
Q 022321 105 SVVYVNYGSVTVMSE---QHLTEFAWGLANSKR-PFLWILRPDVVMGDSVVLPDEYFE-EIKDRG--LIVSWCNQ-EQVL 176 (299)
Q Consensus 105 ~vVyvsfGS~~~~~~---~~~~~l~~al~~~~~-~~iw~~~~~~~~~~~~~l~~~~~~-~~~~n~--~v~~~~pq-~~iL 176 (299)
..+||+-||...... -..+++.+.|.+.|+ +.+.-++.+.. ..++.... +..+.. ..++|-|. .+.+
T Consensus 4 ~~vFVTVGtT~Fd~LI~~Vl~~~~~~~L~k~G~~kLiiQ~Grg~~-----~~~d~~~~~~k~~gl~id~y~f~psl~e~I 78 (170)
T KOG3349|consen 4 MTVFVTVGTTSFDDLISCVLSEEFLQELQKRGFTKLIIQIGRGQP-----FFGDPIDLIRKNGGLTIDGYDFSPSLTEDI 78 (170)
T ss_pred eEEEEEeccccHHHHHHHHcCHHHHHHHHHcCccEEEEEecCCcc-----CCCCHHHhhcccCCeEEEEEecCccHHHHH
Confidence 468999999852111 112456777877776 56666765421 11222111 111222 23577886 5677
Q ss_pred cCCCcceEeeccCcchhhhhHhcCCcEEeccC----cCCHHHHHHHHHHHhCceE
Q 022321 177 LHPSVGAFLTHCGWNSTMESICGGVPVICWPF----FAEQQTNCRYACTTWGIGM 227 (299)
Q Consensus 177 ~~~~v~~fItHgG~~s~~Eal~~GvP~i~~P~----~~DQ~~na~~v~~~~g~G~ 227 (299)
+.+++ +|+|+|+||++|.+..|+|.|+++- ...|-.-|..+ ++.|-=.
T Consensus 79 ~~Adl--VIsHAGaGS~letL~l~KPlivVvNd~LMDNHQ~ELA~qL-~~egyL~ 130 (170)
T KOG3349|consen 79 RSADL--VISHAGAGSCLETLRLGKPLIVVVNDSLMDNHQLELAKQL-AEEGYLY 130 (170)
T ss_pred hhccE--EEecCCcchHHHHHHcCCCEEEEeChHhhhhHHHHHHHHH-HhcCcEE
Confidence 77888 9999999999999999999999995 45788889988 6656443
No 48
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=98.15 E-value=0.00096 Score=59.90 Aligned_cols=82 Identities=13% Similarity=0.174 Sum_probs=62.5
Q ss_pred hcCCeEEEeecchh---hhhcCCCcceEee----ccCcchhhhhHhcCCcEEeccCcCCHHHHHHHHHHHhCceEEecCC
Q 022321 160 IKDRGLIVSWCNQE---QVLLHPSVGAFLT----HCGWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHD 232 (299)
Q Consensus 160 ~~~n~~v~~~~pq~---~iL~~~~v~~fIt----HgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~ 232 (299)
.+.++.+.+++++. .++..+++ +|. -|.-+++.||+++|+|+|+.+. ......+ +..+.|..+. .
T Consensus 254 ~~~~v~~~g~~~~~~~~~~~~~~di--~i~~~~~~~~~~~~~Ea~~~g~pvI~~~~----~~~~~~~-~~~~~g~~~~-~ 325 (374)
T cd03801 254 LGDRVTFLGFVPDEDLPALYAAADV--FVLPSLYEGFGLVLLEAMAAGLPVVASDV----GGIPEVV-EDGETGLLVP-P 325 (374)
T ss_pred CCcceEEEeccChhhHHHHHHhcCE--EEecchhccccchHHHHHHcCCcEEEeCC----CChhHHh-cCCcceEEeC-C
Confidence 35788899999754 38888888 552 2456799999999999999776 3345555 5557777776 4
Q ss_pred CCHHHHHHHHHHHhcCC
Q 022321 233 VKRGDIEALVKEMMEGD 249 (299)
Q Consensus 233 ~~~~~l~~av~~ll~~~ 249 (299)
.+.+++.+++.++++++
T Consensus 326 ~~~~~l~~~i~~~~~~~ 342 (374)
T cd03801 326 GDPEALAEAILRLLDDP 342 (374)
T ss_pred CCHHHHHHHHHHHHcCh
Confidence 56899999999999887
No 49
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=98.09 E-value=0.0015 Score=58.98 Aligned_cols=84 Identities=13% Similarity=0.035 Sum_probs=62.2
Q ss_pred cCCeEEEeecchh---hhhcCCCcceEee--ccCcchhhhhHhcCCcEEeccCcCCHHHHHHHHHHHhCceEEecCCCCH
Q 022321 161 KDRGLIVSWCNQE---QVLLHPSVGAFLT--HCGWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVKR 235 (299)
Q Consensus 161 ~~n~~v~~~~pq~---~iL~~~~v~~fIt--HgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~ 235 (299)
.+++.+.+++++. .++..+++..+.+ -|.-++++||+++|+|+|+.+..+ ....+ ...+.|..+. .-+.
T Consensus 258 ~~~v~~~g~~~~~~~~~~~~~ad~~i~~~~~~~~~~~~~Ea~~~G~pvI~~~~~~----~~~~~-~~~~~g~~~~-~~~~ 331 (377)
T cd03798 258 EDRVTFLGAVPHEEVPAYYAAADVFVLPSLREGFGLVLLEAMACGLPVVATDVGG----IPEII-TDGENGLLVP-PGDP 331 (377)
T ss_pred cceEEEeCCCCHHHHHHHHHhcCeeecchhhccCChHHHHHHhcCCCEEEecCCC----hHHHh-cCCcceeEEC-CCCH
Confidence 4688899999875 4788888833222 245678999999999999876543 34445 5556677665 4689
Q ss_pred HHHHHHHHHHhcCCh
Q 022321 236 GDIEALVKEMMEGDE 250 (299)
Q Consensus 236 ~~l~~av~~ll~~~~ 250 (299)
+++.+++.+++++++
T Consensus 332 ~~l~~~i~~~~~~~~ 346 (377)
T cd03798 332 EALAEAILRLLADPW 346 (377)
T ss_pred HHHHHHHHHHhcCcH
Confidence 999999999999873
No 50
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=98.04 E-value=0.0014 Score=62.35 Aligned_cols=92 Identities=14% Similarity=0.164 Sum_probs=64.5
Q ss_pred eEEEeecch-hhhhcCCCcceEeec-----cCcchhhhhHhcCCcEEeccCcCCHHHHHHHHHHHhCceEEecCCCCHHH
Q 022321 164 GLIVSWCNQ-EQVLLHPSVGAFLTH-----CGWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVKRGD 237 (299)
Q Consensus 164 ~~v~~~~pq-~~iL~~~~v~~fItH-----gG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~ 237 (299)
+.+.+.... ..+++.+++ ++.. +|..+++||+++|+|+|+-|...++......+ .+.|+++... +.++
T Consensus 304 v~l~~~~~el~~~y~~aDi--~~v~~S~~e~~g~~~lEAma~G~PVI~g~~~~~~~e~~~~~-~~~g~~~~~~---d~~~ 377 (425)
T PRK05749 304 VLLGDTMGELGLLYAIADI--AFVGGSLVKRGGHNPLEPAAFGVPVISGPHTFNFKEIFERL-LQAGAAIQVE---DAED 377 (425)
T ss_pred EEEEecHHHHHHHHHhCCE--EEECCCcCCCCCCCHHHHHHhCCCEEECCCccCHHHHHHHH-HHCCCeEEEC---CHHH
Confidence 444444333 357888887 4431 34446999999999999999988888877776 6668777654 7899
Q ss_pred HHHHHHHHhcCChh-HHHHHHHHHH
Q 022321 238 IEALVKEMMEGDEG-KKMRQKAWEW 261 (299)
Q Consensus 238 l~~av~~ll~~~~~-~~~r~~a~~l 261 (299)
+.+++.++++|++. +.|.+++++.
T Consensus 378 La~~l~~ll~~~~~~~~m~~~a~~~ 402 (425)
T PRK05749 378 LAKAVTYLLTDPDARQAYGEAGVAF 402 (425)
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 99999999987632 3344444433
No 51
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=98.03 E-value=0.0003 Score=63.67 Aligned_cols=133 Identities=15% Similarity=0.091 Sum_probs=82.2
Q ss_pred CCceEEEeecCCcc-cCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCcCCChhhhhhhcCCeEEEeecchhh---hhcC
Q 022321 103 ANSVVYVNYGSVTV-MSEQHLTEFAWGLANSKRPFLWILRPDVVMGDSVVLPDEYFEEIKDRGLIVSWCNQEQ---VLLH 178 (299)
Q Consensus 103 ~~~vVyvsfGS~~~-~~~~~~~~l~~al~~~~~~~iw~~~~~~~~~~~~~l~~~~~~~~~~n~~v~~~~pq~~---iL~~ 178 (299)
+.+.+++.+|+... ...+.+.+.+..+...++++++.-.... ............++.+.+|+++.+ +++.
T Consensus 189 ~~~~~i~~~G~~~~~k~~~~li~~~~~l~~~~~~l~i~G~~~~------~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ 262 (359)
T cd03823 189 GGRLRFGFIGQLTPHKGVDLLLEAFKRLPRGDIELVIVGNGLE------LEEESYELEGDPRVEFLGAYPQEEIDDFYAE 262 (359)
T ss_pred CCceEEEEEecCccccCHHHHHHHHHHHHhcCcEEEEEcCchh------hhHHHHhhcCCCeEEEeCCCCHHHHHHHHHh
Confidence 44566777888742 2333333444444333566555432210 000000012347888899997654 7888
Q ss_pred CCcceEe--ec--cCc-chhhhhHhcCCcEEeccCcCCHHHHHHHHHHHhCceEEecCCCCHHHHHHHHHHHhcCC
Q 022321 179 PSVGAFL--TH--CGW-NSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVKRGDIEALVKEMMEGD 249 (299)
Q Consensus 179 ~~v~~fI--tH--gG~-~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~l~~av~~ll~~~ 249 (299)
+++ +| ++ .|+ .++.||+++|+|+|+.+.. .+...+ ...+.|..+. .-+.+++.+++.++++|+
T Consensus 263 ad~--~i~ps~~~e~~~~~~~Ea~a~G~Pvi~~~~~----~~~e~i-~~~~~g~~~~-~~d~~~l~~~i~~l~~~~ 330 (359)
T cd03823 263 IDV--LVVPSIWPENFPLVIREALAAGVPVIASDIG----GMAELV-RDGVNGLLFP-PGDAEDLAAALERLIDDP 330 (359)
T ss_pred CCE--EEEcCcccCCCChHHHHHHHCCCCEEECCCC----CHHHHh-cCCCcEEEEC-CCCHHHHHHHHHHHHhCh
Confidence 888 55 32 333 4799999999999997653 345555 5555787776 346899999999999976
No 52
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=97.97 E-value=0.00085 Score=61.13 Aligned_cols=135 Identities=14% Similarity=0.083 Sum_probs=81.0
Q ss_pred CceEEEeecCCc-ccCHHHHHHHHHHHHcC--CCCEEEEEcCCCCCCCCcCCChhhhhh--hcCCeEEEeecchh---hh
Q 022321 104 NSVVYVNYGSVT-VMSEQHLTEFAWGLANS--KRPFLWILRPDVVMGDSVVLPDEYFEE--IKDRGLIVSWCNQE---QV 175 (299)
Q Consensus 104 ~~vVyvsfGS~~-~~~~~~~~~l~~al~~~--~~~~iw~~~~~~~~~~~~~l~~~~~~~--~~~n~~v~~~~pq~---~i 175 (299)
+++.++.+|+.. ....+.+.+.+..+... +..++++-.... ...+ ..+.+. .++++.+.+++|+. .+
T Consensus 178 ~~~~i~~~g~~~~~k~~~~l~~~~~~l~~~~~~~~l~i~G~~~~----~~~~-~~~~~~~~~~~~v~~~g~~~~~~l~~~ 252 (355)
T cd03799 178 EPLRILSVGRLVEKKGLDYLLEALALLKDRGIDFRLDIVGDGPL----RDEL-EALIAELGLEDRVTLLGAKSQEEVREL 252 (355)
T ss_pred CCeEEEEEeeeccccCHHHHHHHHHHHhhcCCCeEEEEEECCcc----HHHH-HHHHHHcCCCCeEEECCcCChHHHHHH
Confidence 345666778763 22334444444444443 444444432210 0000 111122 35788899999754 37
Q ss_pred hcCCCcceEeec--------cCcchhhhhHhcCCcEEeccCcCCHHHHHHHHHHHhCceEEecCCCCHHHHHHHHHHHhc
Q 022321 176 LLHPSVGAFLTH--------CGWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVKRGDIEALVKEMME 247 (299)
Q Consensus 176 L~~~~v~~fItH--------gG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~l~~av~~ll~ 247 (299)
++++++.++-+. |.-++++||+++|+|+|+.+... ....+ +....|..+. .-+.+++.++|.++++
T Consensus 253 ~~~adi~l~~s~~~~~~~~e~~~~~~~Ea~a~G~Pvi~~~~~~----~~~~i-~~~~~g~~~~-~~~~~~l~~~i~~~~~ 326 (355)
T cd03799 253 LRAADLFVLPSVTAADGDREGLPVVLMEAMAMGLPVISTDVSG----IPELV-EDGETGLLVP-PGDPEALADAIERLLD 326 (355)
T ss_pred HHhCCEEEecceecCCCCccCccHHHHHHHHcCCCEEecCCCC----cchhh-hCCCceEEeC-CCCHHHHHHHHHHHHh
Confidence 888888333222 33478999999999999976532 22344 4444787775 3488999999999998
Q ss_pred CC
Q 022321 248 GD 249 (299)
Q Consensus 248 ~~ 249 (299)
++
T Consensus 327 ~~ 328 (355)
T cd03799 327 DP 328 (355)
T ss_pred CH
Confidence 76
No 53
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=97.96 E-value=0.0012 Score=59.20 Aligned_cols=134 Identities=15% Similarity=0.108 Sum_probs=81.5
Q ss_pred CCceEEEeecCCcc-cCHHHHHHHHHHHHc--CCCCEEEEEcCCCCCCCCcCCChhh-hhh--hcCCeEEEeecch-hhh
Q 022321 103 ANSVVYVNYGSVTV-MSEQHLTEFAWGLAN--SKRPFLWILRPDVVMGDSVVLPDEY-FEE--IKDRGLIVSWCNQ-EQV 175 (299)
Q Consensus 103 ~~~vVyvsfGS~~~-~~~~~~~~l~~al~~--~~~~~iw~~~~~~~~~~~~~l~~~~-~~~--~~~n~~v~~~~pq-~~i 175 (299)
+++++++..|+... ...+.+.+.+..+.+ .+..++++-..... ...... ... ...++.+.++..+ ..+
T Consensus 186 ~~~~~i~~~G~~~~~k~~~~li~~~~~l~~~~~~~~l~i~G~~~~~-----~~~~~~~~~~~~~~~~v~~~g~~~~~~~~ 260 (359)
T cd03808 186 EDDPVFLFVARLLKDKGIDELLEAARILKAKGPNVRLLLVGDGDEE-----NPAAILEIEKLGLEGRVEFLGFRDDVPEL 260 (359)
T ss_pred CCCcEEEEEeccccccCHHHHHHHHHHHHhcCCCeEEEEEcCCCcc-----hhhHHHHHHhcCCcceEEEeeccccHHHH
Confidence 34567778888742 334444455555543 34555544332210 000000 111 2356777777544 358
Q ss_pred hcCCCcceEeeccC----cchhhhhHhcCCcEEeccCcCCHHHHHHHHHHHhCceEEecCCCCHHHHHHHHHHHhcCC
Q 022321 176 LLHPSVGAFLTHCG----WNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVKRGDIEALVKEMMEGD 249 (299)
Q Consensus 176 L~~~~v~~fItHgG----~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~l~~av~~ll~~~ 249 (299)
++.+++ +|.-.. .++++||+++|+|+|+.+..+ +...+ +..+.|..+. .-+.+++.+++.+++.++
T Consensus 261 ~~~adi--~i~ps~~e~~~~~~~Ea~~~G~Pvi~s~~~~----~~~~i-~~~~~g~~~~-~~~~~~~~~~i~~l~~~~ 330 (359)
T cd03808 261 LAAADV--FVLPSYREGLPRVLLEAMAMGRPVIATDVPG----CREAV-IDGVNGFLVP-PGDAEALADAIERLIEDP 330 (359)
T ss_pred HHhccE--EEecCcccCcchHHHHHHHcCCCEEEecCCC----chhhh-hcCcceEEEC-CCCHHHHHHHHHHHHhCH
Confidence 888888 664332 578999999999999976543 33445 5556777765 357899999999999876
No 54
>PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A.
Probab=97.95 E-value=0.00022 Score=68.15 Aligned_cols=140 Identities=16% Similarity=0.208 Sum_probs=78.2
Q ss_pred CCceEEEeecCCcccCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCcCCChhhhh-h-hcCCeEEEeecchhh---hhc
Q 022321 103 ANSVVYVNYGSVTVMSEQHLTEFAWGLANSKRPFLWILRPDVVMGDSVVLPDEYFE-E-IKDRGLIVSWCNQEQ---VLL 177 (299)
Q Consensus 103 ~~~vVyvsfGS~~~~~~~~~~~l~~al~~~~~~~iw~~~~~~~~~~~~~l~~~~~~-~-~~~n~~v~~~~pq~~---iL~ 177 (299)
+..++|.||.+.....++.+..-.+-|++.+...+|..+..... ...+-..+.+ . -++++.+.++.|+.+ .+.
T Consensus 283 ~d~vvF~~fn~~~KI~p~~l~~W~~IL~~vP~S~L~L~~~~~~~--~~~l~~~~~~~Gv~~~Ri~f~~~~~~~ehl~~~~ 360 (468)
T PF13844_consen 283 EDAVVFGSFNNLFKISPETLDLWARILKAVPNSRLWLLRFPASG--EARLRRRFAAHGVDPDRIIFSPVAPREEHLRRYQ 360 (468)
T ss_dssp SSSEEEEE-S-GGG--HHHHHHHHHHHHHSTTEEEEEEETSTTH--HHHHHHHHHHTTS-GGGEEEEE---HHHHHHHGG
T ss_pred CCceEEEecCccccCCHHHHHHHHHHHHhCCCcEEEEeeCCHHH--HHHHHHHHHHcCCChhhEEEcCCCCHHHHHHHhh
Confidence 55799999999999999999888899998888899987643110 0001111111 0 147788888887655 334
Q ss_pred CCCcceE---eeccCcchhhhhHhcCCcEEeccCcCCHHH-HHHHHHHHhCceEEecCCCCHHHHHHHHHHHhcCC
Q 022321 178 HPSVGAF---LTHCGWNSTMESICGGVPVICWPFFAEQQT-NCRYACTTWGIGMEVNHDVKRGDIEALVKEMMEGD 249 (299)
Q Consensus 178 ~~~v~~f---ItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~-na~~v~~~~g~G~~l~~~~~~~~l~~av~~ll~~~ 249 (299)
..++ + ...+|.+|++||++.|||+|++|--.=.-. -+..+ ...|+.-.+- .+.++-.+..-++-+|.
T Consensus 361 ~~DI--~LDT~p~nG~TTt~dALwmGVPvVTl~G~~~~sR~~aSiL-~~lGl~ElIA--~s~~eYv~~Av~La~D~ 431 (468)
T PF13844_consen 361 LADI--CLDTFPYNGGTTTLDALWMGVPVVTLPGETMASRVGASIL-RALGLPELIA--DSEEEYVEIAVRLATDP 431 (468)
T ss_dssp G-SE--EE--SSS--SHHHHHHHHHT--EEB---SSGGGSHHHHHH-HHHT-GGGB---SSHHHHHHHHHHHHH-H
T ss_pred hCCE--EeeCCCCCCcHHHHHHHHcCCCEEeccCCCchhHHHHHHH-HHcCCchhcC--CCHHHHHHHHHHHhCCH
Confidence 4555 5 356789999999999999999996433333 34445 7778776554 34555544444566665
No 55
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=97.94 E-value=0.00079 Score=63.15 Aligned_cols=84 Identities=13% Similarity=0.159 Sum_probs=61.9
Q ss_pred hcCCeEEEeecchhh---hhcCCCcceEeec----cCc-chhhhhHhcCCcEEeccCcCCHHHHHHHHHHHhCceEEecC
Q 022321 160 IKDRGLIVSWCNQEQ---VLLHPSVGAFLTH----CGW-NSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNH 231 (299)
Q Consensus 160 ~~~n~~v~~~~pq~~---iL~~~~v~~fItH----gG~-~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~ 231 (299)
.+.++.+.+++|+.+ +++.+++ ||.- -|. .+++||+++|+|+|+....+ +...+ +.-..|..+..
T Consensus 255 l~~~v~~~G~~~~~~l~~~~~~aDv--~v~pS~~~E~f~~~~lEAma~G~PVI~s~~gg----~~Eiv-~~~~~G~~l~~ 327 (380)
T PRK15484 255 IGDRCIMLGGQPPEKMHNYYPLADL--VVVPSQVEEAFCMVAVEAMAAGKPVLASTKGG----ITEFV-LEGITGYHLAE 327 (380)
T ss_pred cCCcEEEeCCCCHHHHHHHHHhCCE--EEeCCCCccccccHHHHHHHcCCCEEEeCCCC----cHhhc-ccCCceEEEeC
Confidence 456788889998644 6888998 6642 333 57889999999999987632 34445 55557875543
Q ss_pred CCCHHHHHHHHHHHhcCCh
Q 022321 232 DVKRGDIEALVKEMMEGDE 250 (299)
Q Consensus 232 ~~~~~~l~~av~~ll~~~~ 250 (299)
..+.+++.++|.++++|++
T Consensus 328 ~~d~~~la~~I~~ll~d~~ 346 (380)
T PRK15484 328 PMTSDSIISDINRTLADPE 346 (380)
T ss_pred CCCHHHHHHHHHHHHcCHH
Confidence 5689999999999999873
No 56
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=97.93 E-value=0.00024 Score=64.45 Aligned_cols=144 Identities=13% Similarity=0.121 Sum_probs=86.9
Q ss_pred CceEEEeecCCcc-cCHHHHHHHHHHHHc--CCCCEEEEEcCCCCCCCCcCCChhhhh-----hhcCCeEEEeecchhh-
Q 022321 104 NSVVYVNYGSVTV-MSEQHLTEFAWGLAN--SKRPFLWILRPDVVMGDSVVLPDEYFE-----EIKDRGLIVSWCNQEQ- 174 (299)
Q Consensus 104 ~~vVyvsfGS~~~-~~~~~~~~l~~al~~--~~~~~iw~~~~~~~~~~~~~l~~~~~~-----~~~~n~~v~~~~pq~~- 174 (299)
++.+++..|+... ...+.+..++..+.. .+..+++.-+.. ..+.+.+ ...+++.+.+++|+.+
T Consensus 201 ~~~~i~~~G~~~~~k~~~~l~~~~~~~~~~~~~~~l~i~G~~~--------~~~~~~~~~~~~~~~~~v~~~g~~~~~~~ 272 (374)
T cd03817 201 DEPVLLYVGRLAKEKNIDFLIRAFARLLKEEPDVKLVIVGDGP--------EREELEELARELGLADRVIFTGFVPREEL 272 (374)
T ss_pred CCeEEEEEeeeecccCHHHHHHHHHHHHHhCCCeEEEEEeCCc--------hHHHHHHHHHHcCCCCcEEEeccCChHHH
Confidence 3455667787642 233444444444443 345555543321 1111111 2356888999998764
Q ss_pred --hhcCCCcceEeec----cCcchhhhhHhcCCcEEeccCcCCHHHHHHHHHHHhCceEEecCCCCHHHHHHHHHHHhcC
Q 022321 175 --VLLHPSVGAFLTH----CGWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVKRGDIEALVKEMMEG 248 (299)
Q Consensus 175 --iL~~~~v~~fItH----gG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~l~~av~~ll~~ 248 (299)
++..+++ +|.- +..+++.||+++|+|+|+.+.. ..+..+ +..+.|..+.. -+. ++.+++.+++++
T Consensus 273 ~~~~~~ad~--~l~~s~~e~~~~~~~Ea~~~g~PvI~~~~~----~~~~~i-~~~~~g~~~~~-~~~-~~~~~i~~l~~~ 343 (374)
T cd03817 273 PDYYKAADL--FVFASTTETQGLVLLEAMAAGLPVVAVDAP----GLPDLV-ADGENGFLFPP-GDE-ALAEALLRLLQD 343 (374)
T ss_pred HHHHHHcCE--EEecccccCcChHHHHHHHcCCcEEEeCCC----Chhhhe-ecCceeEEeCC-CCH-HHHHHHHHHHhC
Confidence 7888888 6533 3347899999999999997653 344555 55577887764 222 899999999987
Q ss_pred Chh-HHHHHHHHHHHHH
Q 022321 249 DEG-KKMRQKAWEWKKK 264 (299)
Q Consensus 249 ~~~-~~~r~~a~~l~~~ 264 (299)
++. ..+.+++++..+.
T Consensus 344 ~~~~~~~~~~~~~~~~~ 360 (374)
T cd03817 344 PELRRRLSKNAEESAEK 360 (374)
T ss_pred hHHHHHHHHHHHHHHHH
Confidence 631 2344444444433
No 57
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=97.90 E-value=0.003 Score=57.38 Aligned_cols=93 Identities=18% Similarity=0.231 Sum_probs=62.5
Q ss_pred cCCeEEEe-ecchh---hhhcCCCcceEeec----cCcchhhhhHhcCCcEEeccCcCCHHHHHHHHHHHhCceEEecCC
Q 022321 161 KDRGLIVS-WCNQE---QVLLHPSVGAFLTH----CGWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHD 232 (299)
Q Consensus 161 ~~n~~v~~-~~pq~---~iL~~~~v~~fItH----gG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~ 232 (299)
.+++.+.+ |+|+. .+++.+++-.+-++ |..++++||+++|+|+|+.+..+ ...+ ...+.|..+. .
T Consensus 246 ~~~v~~~~~~~~~~~~~~~~~~ad~~v~ps~~e~~~~~~~~~Ea~a~G~PvI~~~~~~-----~~~i-~~~~~g~~~~-~ 318 (366)
T cd03822 246 ADRVIFINRYLPDEELPELFSAADVVVLPYRSADQTQSGVLAYAIGFGKPVISTPVGH-----AEEV-LDGGTGLLVP-P 318 (366)
T ss_pred CCcEEEecCcCCHHHHHHHHhhcCEEEecccccccccchHHHHHHHcCCCEEecCCCC-----hhee-eeCCCcEEEc-C
Confidence 46777774 58764 48888888332232 33468999999999999988654 2233 4456777665 3
Q ss_pred CCHHHHHHHHHHHhcCCh-hHHHHHHHHH
Q 022321 233 VKRGDIEALVKEMMEGDE-GKKMRQKAWE 260 (299)
Q Consensus 233 ~~~~~l~~av~~ll~~~~-~~~~r~~a~~ 260 (299)
-+.+++.+++.+++++++ ..++++++++
T Consensus 319 ~d~~~~~~~l~~l~~~~~~~~~~~~~~~~ 347 (366)
T cd03822 319 GDPAALAEAIRRLLADPELAQALRARARE 347 (366)
T ss_pred CCHHHHHHHHHHHHcChHHHHHHHHHHHH
Confidence 468999999999999852 2334444443
No 58
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=97.87 E-value=0.00046 Score=62.95 Aligned_cols=141 Identities=16% Similarity=0.146 Sum_probs=87.7
Q ss_pred ceEEEeecCCcccCHHHHHHHHHHHHcCC-CCEEEEEcCCCCCCCCcCCChhhhh-----hhcCCeEEEeecchh---hh
Q 022321 105 SVVYVNYGSVTVMSEQHLTEFAWGLANSK-RPFLWILRPDVVMGDSVVLPDEYFE-----EIKDRGLIVSWCNQE---QV 175 (299)
Q Consensus 105 ~vVyvsfGS~~~~~~~~~~~l~~al~~~~-~~~iw~~~~~~~~~~~~~l~~~~~~-----~~~~n~~v~~~~pq~---~i 175 (299)
..+++..|+.. ..+....+++++.... ..+++.-.+. ....+.+ ...+|+.+.+|+|+. .+
T Consensus 191 ~~~i~~~G~~~--~~K~~~~li~a~~~l~~~~l~i~G~g~--------~~~~~~~~~~~~~~~~~V~~~g~v~~~~~~~~ 260 (357)
T cd03795 191 RPFFLFVGRLV--YYKGLDVLLEAAAALPDAPLVIVGEGP--------LEAELEALAAALGLLDRVRFLGRLDDEEKAAL 260 (357)
T ss_pred CcEEEEecccc--cccCHHHHHHHHHhccCcEEEEEeCCh--------hHHHHHHHHHhcCCcceEEEcCCCCHHHHHHH
Confidence 44666777764 2233455667776655 5555443221 1111111 224689999999975 48
Q ss_pred hcCCCcceEeec---cCc-chhhhhHhcCCcEEeccCcCCHHHHHHHHHHH-hCceEEecCCCCHHHHHHHHHHHhcCCh
Q 022321 176 LLHPSVGAFLTH---CGW-NSTMESICGGVPVICWPFFAEQQTNCRYACTT-WGIGMEVNHDVKRGDIEALVKEMMEGDE 250 (299)
Q Consensus 176 L~~~~v~~fItH---gG~-~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~-~g~G~~l~~~~~~~~l~~av~~ll~~~~ 250 (299)
++.+++..+.++ -|. .+++||+++|+|+|+....+.... + .. -+.|..+. .-+.+++.++|.++++|++
T Consensus 261 ~~~ad~~i~ps~~~~e~~g~~~~Ea~~~g~Pvi~~~~~~~~~~----i-~~~~~~g~~~~-~~d~~~~~~~i~~l~~~~~ 334 (357)
T cd03795 261 LAACDVFVFPSVERSEAFGIVLLEAMAFGKPVISTEIGTGGSY----V-NLHGVTGLVVP-PGDPAALAEAIRRLLEDPE 334 (357)
T ss_pred HHhCCEEEeCCcccccccchHHHHHHHcCCCEEecCCCCchhH----H-hhCCCceEEeC-CCCHHHHHHHHHHHHHCHH
Confidence 888888444443 343 479999999999999766554433 2 32 46777665 3579999999999999863
Q ss_pred -hHHHHHHHHHH
Q 022321 251 -GKKMRQKAWEW 261 (299)
Q Consensus 251 -~~~~r~~a~~l 261 (299)
..++++++++.
T Consensus 335 ~~~~~~~~~~~~ 346 (357)
T cd03795 335 LRERLGEAARER 346 (357)
T ss_pred HHHHHHHHHHHH
Confidence 23444454443
No 59
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=97.86 E-value=0.00099 Score=63.16 Aligned_cols=111 Identities=14% Similarity=0.104 Sum_probs=73.7
Q ss_pred cCCeEEEeecchhh---hhcCCCcceEee--c-------cCc-chhhhhHhcCCcEEeccCcCCHHHHHHHHHHHhCceE
Q 022321 161 KDRGLIVSWCNQEQ---VLLHPSVGAFLT--H-------CGW-NSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGM 227 (299)
Q Consensus 161 ~~n~~v~~~~pq~~---iL~~~~v~~fIt--H-------gG~-~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~ 227 (299)
.+++.+.+|+|+.+ ++..+++ ||. + =|. ++++||+++|+|+|+....+ ....+ +.-..|.
T Consensus 278 ~~~V~~~G~~~~~el~~~l~~aDv--~v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~t~~~g----~~E~v-~~~~~G~ 350 (406)
T PRK15427 278 EDVVEMPGFKPSHEVKAMLDDADV--FLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHSG----IPELV-EADKSGW 350 (406)
T ss_pred CCeEEEeCCCCHHHHHHHHHhCCE--EEECCccCCCCCccCccHHHHHHHhCCCCEEEeCCCC----chhhh-cCCCceE
Confidence 46788999999764 7888888 653 3 243 57899999999999976533 33344 4545787
Q ss_pred EecCCCCHHHHHHHHHHHhc-CCh-hHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHH
Q 022321 228 EVNHDVKRGDIEALVKEMME-GDE-GKKMRQKAWEWKKKAEAATAVGGQSYNNFDRLVKMV 286 (299)
Q Consensus 228 ~l~~~~~~~~l~~av~~ll~-~~~-~~~~r~~a~~l~~~~~~a~~~gg~s~~~l~~~v~~l 286 (299)
.+. .-+.+++.++|.++++ |++ .+++.+++++ .+...-+......++.+.+
T Consensus 351 lv~-~~d~~~la~ai~~l~~~d~~~~~~~~~~ar~-------~v~~~f~~~~~~~~l~~~~ 403 (406)
T PRK15427 351 LVP-ENDAQALAQRLAAFSQLDTDELAPVVKRARE-------KVETDFNQQVINRELASLL 403 (406)
T ss_pred EeC-CCCHHHHHHHHHHHHhCCHHHHHHHHHHHHH-------HHHHhcCHHHHHHHHHHHH
Confidence 775 4589999999999998 763 2334444433 3333445555555555444
No 60
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=97.85 E-value=0.0004 Score=57.03 Aligned_cols=135 Identities=13% Similarity=0.143 Sum_probs=82.8
Q ss_pred CCceEEEeecCCcc-cCHHHHHHHHHHHHc--CCCCEEEEEcCCCCCCCCcCCChhhhh--hhcCCeEEEeecch---hh
Q 022321 103 ANSVVYVNYGSVTV-MSEQHLTEFAWGLAN--SKRPFLWILRPDVVMGDSVVLPDEYFE--EIKDRGLIVSWCNQ---EQ 174 (299)
Q Consensus 103 ~~~vVyvsfGS~~~-~~~~~~~~l~~al~~--~~~~~iw~~~~~~~~~~~~~l~~~~~~--~~~~n~~v~~~~pq---~~ 174 (299)
+++.+++.+|+... ...+.+..++.-+.. .+.-.++.++.... ...+ ....+ ....++.+.++.++ ..
T Consensus 13 ~~~~~il~~g~~~~~K~~~~li~a~~~l~~~~~~~~~l~i~G~~~~---~~~~-~~~~~~~~~~~~i~~~~~~~~~~l~~ 88 (172)
T PF00534_consen 13 DKKKIILFIGRLDPEKGIDLLIEAFKKLKEKKNPNYKLVIVGDGEY---KKEL-KNLIEKLNLKENIIFLGYVPDDELDE 88 (172)
T ss_dssp TTSEEEEEESESSGGGTHHHHHHHHHHHHHHHHTTEEEEEESHCCH---HHHH-HHHHHHTTCGTTEEEEESHSHHHHHH
T ss_pred CCCeEEEEEecCccccCHHHHHHHHHHHHhhcCCCeEEEEEccccc---cccc-cccccccccccccccccccccccccc
Confidence 45667777888743 334444444443332 22233444441100 0000 11111 23578889999883 34
Q ss_pred hhcCCCcceEeec----cCcchhhhhHhcCCcEEeccCcCCHHHHHHHHHHHhCceEEecCCCCHHHHHHHHHHHhcCC
Q 022321 175 VLLHPSVGAFLTH----CGWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVKRGDIEALVKEMMEGD 249 (299)
Q Consensus 175 iL~~~~v~~fItH----gG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~l~~av~~ll~~~ 249 (299)
++..+++ +|+. +...++.||+++|+|+|+.. ...+...+ ...+.|..+.. .+.+++.++|.++++++
T Consensus 89 ~~~~~di--~v~~s~~e~~~~~~~Ea~~~g~pvI~~~----~~~~~e~~-~~~~~g~~~~~-~~~~~l~~~i~~~l~~~ 159 (172)
T PF00534_consen 89 LYKSSDI--FVSPSRNEGFGLSLLEAMACGCPVIASD----IGGNNEII-NDGVNGFLFDP-NDIEELADAIEKLLNDP 159 (172)
T ss_dssp HHHHTSE--EEE-BSSBSS-HHHHHHHHTT-EEEEES----STHHHHHS-GTTTSEEEEST-TSHHHHHHHHHHHHHHH
T ss_pred cccccee--ccccccccccccccccccccccceeecc----ccCCceee-ccccceEEeCC-CCHHHHHHHHHHHHCCH
Confidence 8888888 7765 55679999999999999855 34555666 66677988874 49999999999999876
No 61
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=97.85 E-value=0.00038 Score=63.36 Aligned_cols=145 Identities=19% Similarity=0.169 Sum_probs=86.3
Q ss_pred CCceEEEeecCCcc-cCHHHHHHHHHHHHcC-CCCEEEEEcCCCCCCCCcCCChhhhh----hhcCCeEEEeecchhh--
Q 022321 103 ANSVVYVNYGSVTV-MSEQHLTEFAWGLANS-KRPFLWILRPDVVMGDSVVLPDEYFE----EIKDRGLIVSWCNQEQ-- 174 (299)
Q Consensus 103 ~~~vVyvsfGS~~~-~~~~~~~~l~~al~~~-~~~~iw~~~~~~~~~~~~~l~~~~~~----~~~~n~~v~~~~pq~~-- 174 (299)
.++.+++..|+... ...+.+.+.+..+.+. +.++++. +... ..+.+.+ ...+++.+.+++++.+
T Consensus 218 ~~~~~i~~~G~~~~~k~~~~l~~~~~~l~~~~~~~l~i~-G~~~-------~~~~~~~~~~~~~~~~v~~~g~~~~~~~~ 289 (394)
T cd03794 218 DDKFVVLYAGNIGRAQGLDTLLEAAALLKDRPDIRFLIV-GDGP-------EKEELKELAKALGLDNVTFLGRVPKEELP 289 (394)
T ss_pred CCcEEEEEecCcccccCHHHHHHHHHHHhhcCCeEEEEe-CCcc-------cHHHHHHHHHHcCCCcEEEeCCCChHHHH
Confidence 34567777888742 3334444444444443 5555443 3221 1112211 1236788889998654
Q ss_pred -hhcCCCcceEeeccC-------cchhhhhHhcCCcEEeccCcCCHHHHHHHHHHHhCceEEecCCCCHHHHHHHHHHHh
Q 022321 175 -VLLHPSVGAFLTHCG-------WNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVKRGDIEALVKEMM 246 (299)
Q Consensus 175 -iL~~~~v~~fItHgG-------~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~l~~av~~ll 246 (299)
++..+++..+-++.+ -+++.||+++|+|+|+.+..+.+... ...+.|..+. .-+.+++.++|.+++
T Consensus 290 ~~~~~~di~i~~~~~~~~~~~~~p~~~~Ea~~~G~pvi~~~~~~~~~~~-----~~~~~g~~~~-~~~~~~l~~~i~~~~ 363 (394)
T cd03794 290 ELLAAADVGLVPLKPGPAFEGVSPSKLFEYMAAGKPVLASVDGESAELV-----EEAGAGLVVP-PGDPEALAAAILELL 363 (394)
T ss_pred HHHHhhCeeEEeccCcccccccCchHHHHHHHCCCcEEEecCCCchhhh-----ccCCcceEeC-CCCHHHHHHHHHHHH
Confidence 788888833323321 23479999999999999886654432 3336777665 348899999999999
Q ss_pred cCCh-hHHHHHHHHHH
Q 022321 247 EGDE-GKKMRQKAWEW 261 (299)
Q Consensus 247 ~~~~-~~~~r~~a~~l 261 (299)
+|++ ...+++++++.
T Consensus 364 ~~~~~~~~~~~~~~~~ 379 (394)
T cd03794 364 DDPEERAEMGENGRRY 379 (394)
T ss_pred hChHHHHHHHHHHHHH
Confidence 7763 23344444433
No 62
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=97.84 E-value=0.00037 Score=64.10 Aligned_cols=81 Identities=14% Similarity=0.103 Sum_probs=62.2
Q ss_pred cCCeEEEeecchhh---hhcCCCcceEeec----------cCcchhhhhHhcCCcEEeccCcCCHHHHHHHHHHHhCceE
Q 022321 161 KDRGLIVSWCNQEQ---VLLHPSVGAFLTH----------CGWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGM 227 (299)
Q Consensus 161 ~~n~~v~~~~pq~~---iL~~~~v~~fItH----------gG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~ 227 (299)
.+++.+.+++|+.+ +++.+++ ||.- |-.+++.||+++|+|+|+-+..+ ++..+ ...+.|.
T Consensus 244 ~~~v~~~g~~~~~~l~~~~~~ad~--~v~ps~~~~~~~~E~~~~~~~EA~a~G~PvI~s~~~~----~~e~i-~~~~~g~ 316 (367)
T cd05844 244 GGRVTFLGAQPHAEVRELMRRARI--FLQPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHGG----IPEAV-EDGETGL 316 (367)
T ss_pred CCeEEECCCCCHHHHHHHHHhCCE--EEECcccCCCCCccCCchHHHHHHHcCCCEEEeCCCC----chhhe-ecCCeeE
Confidence 56788889998654 6888888 5532 23578999999999999877643 55555 5667888
Q ss_pred EecCCCCHHHHHHHHHHHhcCC
Q 022321 228 EVNHDVKRGDIEALVKEMMEGD 249 (299)
Q Consensus 228 ~l~~~~~~~~l~~av~~ll~~~ 249 (299)
.+. .-+.+++.++|.++++|+
T Consensus 317 ~~~-~~d~~~l~~~i~~l~~~~ 337 (367)
T cd05844 317 LVP-EGDVAALAAALGRLLADP 337 (367)
T ss_pred EEC-CCCHHHHHHHHHHHHcCH
Confidence 776 457899999999999876
No 63
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=97.82 E-value=0.0052 Score=59.21 Aligned_cols=137 Identities=13% Similarity=0.110 Sum_probs=85.4
Q ss_pred eEEEeecCCcccCHHHHHHHHHHHHcC-CCCEEEEEcCCCCCCCCcCCChhhhhhh-cCCeEEEeecchhh---hhcCCC
Q 022321 106 VVYVNYGSVTVMSEQHLTEFAWGLANS-KRPFLWILRPDVVMGDSVVLPDEYFEEI-KDRGLIVSWCNQEQ---VLLHPS 180 (299)
Q Consensus 106 vVyvsfGS~~~~~~~~~~~l~~al~~~-~~~~iw~~~~~~~~~~~~~l~~~~~~~~-~~n~~v~~~~pq~~---iL~~~~ 180 (299)
.+++..|+.. ..+.+..++++++.. +.+++++-.+. ..+.+.+.. ..++.+.+|+++.+ +++.++
T Consensus 264 ~~i~~vGrl~--~~K~~~~li~a~~~~~~~~l~ivG~G~--------~~~~l~~~~~~~~V~f~G~v~~~ev~~~~~~aD 333 (465)
T PLN02871 264 PLIVYVGRLG--AEKNLDFLKRVMERLPGARLAFVGDGP--------YREELEKMFAGTPTVFTGMLQGDELSQAYASGD 333 (465)
T ss_pred eEEEEeCCCc--hhhhHHHHHHHHHhCCCcEEEEEeCCh--------HHHHHHHHhccCCeEEeccCCHHHHHHHHHHCC
Confidence 3455667764 233455677777664 55655443221 112222211 24688889997544 888889
Q ss_pred cceEeeccC----cchhhhhHhcCCcEEeccCcCCHHHHHHHHHHH---hCceEEecCCCCHHHHHHHHHHHhcCCh-hH
Q 022321 181 VGAFLTHCG----WNSTMESICGGVPVICWPFFAEQQTNCRYACTT---WGIGMEVNHDVKRGDIEALVKEMMEGDE-GK 252 (299)
Q Consensus 181 v~~fItHgG----~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~---~g~G~~l~~~~~~~~l~~av~~ll~~~~-~~ 252 (299)
+ ||.-.. .++++||+++|+|+|+....+ ....+ +. -+.|..+. .-+.+++.++|.++++|++ .+
T Consensus 334 v--~V~pS~~E~~g~~vlEAmA~G~PVI~s~~gg----~~eiv-~~~~~~~~G~lv~-~~d~~~la~~i~~ll~~~~~~~ 405 (465)
T PLN02871 334 V--FVMPSESETLGFVVLEAMASGVPVVAARAGG----IPDII-PPDQEGKTGFLYT-PGDVDDCVEKLETLLADPELRE 405 (465)
T ss_pred E--EEECCcccccCcHHHHHHHcCCCEEEcCCCC----cHhhh-hcCCCCCceEEeC-CCCHHHHHHHHHHHHhCHHHHH
Confidence 8 774332 357899999999999876532 23334 44 57788776 3578999999999998763 13
Q ss_pred HHHHHHHH
Q 022321 253 KMRQKAWE 260 (299)
Q Consensus 253 ~~r~~a~~ 260 (299)
++.+++++
T Consensus 406 ~~~~~a~~ 413 (465)
T PLN02871 406 RMGAAARE 413 (465)
T ss_pred HHHHHHHH
Confidence 44555544
No 64
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=97.82 E-value=0.0028 Score=56.59 Aligned_cols=93 Identities=20% Similarity=0.244 Sum_probs=61.8
Q ss_pred cCCeEEEeecc-hhhhhcCCCcceEeecc----CcchhhhhHhcCCcEEeccCcCCHHHHHHHHHHHhCceEEecCCCCH
Q 022321 161 KDRGLIVSWCN-QEQVLLHPSVGAFLTHC----GWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVKR 235 (299)
Q Consensus 161 ~~n~~v~~~~p-q~~iL~~~~v~~fItHg----G~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~ 235 (299)
..++.+.++.. -..++..+++ +|.-. .-++++||+++|+|+|+.+..+.+.. +......|..++ ..+.
T Consensus 234 ~~~v~~~g~~~~~~~~~~~ad~--~i~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~~----~~~~~~~g~~~~-~~~~ 306 (348)
T cd03820 234 EDRVILLGFTKNIEEYYAKASI--FVLTSRFEGFPMVLLEAMAFGLPVISFDCPTGPSE----IIEDGVNGLLVP-NGDV 306 (348)
T ss_pred CCeEEEcCCcchHHHHHHhCCE--EEeCccccccCHHHHHHHHcCCCEEEecCCCchHh----hhccCcceEEeC-CCCH
Confidence 35666667633 3458888888 66443 24789999999999999876544332 212223777776 4578
Q ss_pred HHHHHHHHHHhcCChh-HHHHHHHHH
Q 022321 236 GDIEALVKEMMEGDEG-KKMRQKAWE 260 (299)
Q Consensus 236 ~~l~~av~~ll~~~~~-~~~r~~a~~ 260 (299)
+++.++|.++++|++. ..+++++++
T Consensus 307 ~~~~~~i~~ll~~~~~~~~~~~~~~~ 332 (348)
T cd03820 307 EALAEALLRLMEDEELRKRMGANARE 332 (348)
T ss_pred HHHHHHHHHHHcCHHHHHHHHHHHHH
Confidence 9999999999998732 234444433
No 65
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=97.80 E-value=0.0004 Score=64.55 Aligned_cols=129 Identities=12% Similarity=0.127 Sum_probs=80.1
Q ss_pred CceEEEeecCCcccCHHHHHHHHHHHHcC-----CCCEEEEEcCCCCCCCCcCCChhhhhh--hcCCeEEEeecchh---
Q 022321 104 NSVVYVNYGSVTVMSEQHLTEFAWGLANS-----KRPFLWILRPDVVMGDSVVLPDEYFEE--IKDRGLIVSWCNQE--- 173 (299)
Q Consensus 104 ~~vVyvsfGS~~~~~~~~~~~l~~al~~~-----~~~~iw~~~~~~~~~~~~~l~~~~~~~--~~~n~~v~~~~pq~--- 173 (299)
+.+|+++++-.... .+.+..+++++... +.++++...++.. ....+.+. ..+++.+.+.+++.
T Consensus 197 ~~~vl~~~hr~~~~-~k~~~~ll~a~~~l~~~~~~~~~vi~~~~~~~------~~~~~~~~~~~~~~v~~~~~~~~~~~~ 269 (365)
T TIGR00236 197 KRYILLTLHRRENV-GEPLENIFKAIREIVEEFEDVQIVYPVHLNPV------VREPLHKHLGDSKRVHLIEPLEYLDFL 269 (365)
T ss_pred CCEEEEecCchhhh-hhHHHHHHHHHHHHHHHCCCCEEEEECCCChH------HHHHHHHHhCCCCCEEEECCCChHHHH
Confidence 34566654432111 13456667766542 4566665443210 00111121 23578887766543
Q ss_pred hhhcCCCcceEeeccCcchhhhhHhcCCcEEeccCcCCHHHHHHHHHHHhCceEEecCCCCHHHHHHHHHHHhcCC
Q 022321 174 QVLLHPSVGAFLTHCGWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVKRGDIEALVKEMMEGD 249 (299)
Q Consensus 174 ~iL~~~~v~~fItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~l~~av~~ll~~~ 249 (299)
.+++++++ +|+-.|. .+.||+++|+|+|.++-.++++. + ...|.+..+. .+.++|.+++.++++|+
T Consensus 270 ~~l~~ad~--vv~~Sg~-~~~EA~a~g~PvI~~~~~~~~~e----~-~~~g~~~lv~--~d~~~i~~ai~~ll~~~ 335 (365)
T TIGR00236 270 NLAANSHL--ILTDSGG-VQEEAPSLGKPVLVLRDTTERPE----T-VEAGTNKLVG--TDKENITKAAKRLLTDP 335 (365)
T ss_pred HHHHhCCE--EEECChh-HHHHHHHcCCCEEECCCCCCChH----H-HhcCceEEeC--CCHHHHHHHHHHHHhCh
Confidence 57778887 9987764 47999999999999976665542 2 2357776663 48899999999999876
No 66
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=97.79 E-value=0.0012 Score=61.24 Aligned_cols=92 Identities=13% Similarity=0.164 Sum_probs=66.4
Q ss_pred cCCeEEEeecchhh---hhcCCCcceEeec----cCcchhhhhHhcCCcEEeccCcCCHHHHHHHHHHHhCceEEecCCC
Q 022321 161 KDRGLIVSWCNQEQ---VLLHPSVGAFLTH----CGWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDV 233 (299)
Q Consensus 161 ~~n~~v~~~~pq~~---iL~~~~v~~fItH----gG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~ 233 (299)
.+++.+.+|+|+.+ +++.+++ ++.. +--.+++||+++|+|+|+.+..+ ....+ +..+.|..++ .-
T Consensus 282 ~~~v~~~g~~~~~~~~~~~~~adi--~l~ps~~e~~~~~l~Ea~a~G~Pvi~s~~~~----~~e~i-~~~~~g~~~~-~~ 353 (398)
T cd03800 282 IDRVDFPGRVSREDLPALYRAADV--FVNPALYEPFGLTALEAMACGLPVVATAVGG----PRDIV-VDGVTGLLVD-PR 353 (398)
T ss_pred CceEEEeccCCHHHHHHHHHhCCE--EEecccccccCcHHHHHHhcCCCEEECCCCC----HHHHc-cCCCCeEEeC-CC
Confidence 46788999999765 6888888 6643 22368999999999999877543 44455 6667888776 34
Q ss_pred CHHHHHHHHHHHhcCCh-hHHHHHHHHH
Q 022321 234 KRGDIEALVKEMMEGDE-GKKMRQKAWE 260 (299)
Q Consensus 234 ~~~~l~~av~~ll~~~~-~~~~r~~a~~ 260 (299)
+.+++.++|.+++++++ ...+.+++++
T Consensus 354 ~~~~l~~~i~~l~~~~~~~~~~~~~a~~ 381 (398)
T cd03800 354 DPEALAAALRRLLTDPALRRRLSRAGLR 381 (398)
T ss_pred CHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 79999999999998752 2334444443
No 67
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=97.79 E-value=0.00061 Score=61.74 Aligned_cols=93 Identities=17% Similarity=0.135 Sum_probs=63.5
Q ss_pred cCCeEEEeecchhh---hhcCCCcceEeec--cCcchhhhhHhcCCcEEeccCcCCHHHHHHHHHHHhCceEEecCCCCH
Q 022321 161 KDRGLIVSWCNQEQ---VLLHPSVGAFLTH--CGWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVKR 235 (299)
Q Consensus 161 ~~n~~v~~~~pq~~---iL~~~~v~~fItH--gG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~ 235 (299)
.+++.+.+|+++.+ ++..+++-.+-++ |-.+++.||+++|+|+|+.+.. .....+ .. +.|..... +.
T Consensus 261 ~~~v~~~g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~PvI~~~~~----~~~~~~-~~-~~~~~~~~--~~ 332 (375)
T cd03821 261 EDRVTFTGMLYGEDKAAALADADLFVLPSHSENFGIVVAEALACGTPVVTTDKV----PWQELI-EY-GCGWVVDD--DV 332 (375)
T ss_pred cceEEEcCCCChHHHHHHHhhCCEEEeccccCCCCcHHHHHHhcCCCEEEcCCC----CHHHHh-hc-CceEEeCC--Ch
Confidence 47888899999544 6888888333333 2246899999999999997643 234444 44 77777653 45
Q ss_pred HHHHHHHHHHhcCCh-hHHHHHHHHHH
Q 022321 236 GDIEALVKEMMEGDE-GKKMRQKAWEW 261 (299)
Q Consensus 236 ~~l~~av~~ll~~~~-~~~~r~~a~~l 261 (299)
+++.++|.+++++++ .+.+.+++++.
T Consensus 333 ~~~~~~i~~l~~~~~~~~~~~~~~~~~ 359 (375)
T cd03821 333 DALAAALRRALELPQRLKAMGENGRAL 359 (375)
T ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 999999999998862 22344444443
No 68
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st
Probab=97.77 E-value=0.00027 Score=65.36 Aligned_cols=134 Identities=17% Similarity=0.133 Sum_probs=82.9
Q ss_pred CCceEEEeecCCccc-CHHHHHHHHHHHHcCCC-CEEEEEcCCCCCCCCcCCChhhhhhh---cCCeEEEeecchh---h
Q 022321 103 ANSVVYVNYGSVTVM-SEQHLTEFAWGLANSKR-PFLWILRPDVVMGDSVVLPDEYFEEI---KDRGLIVSWCNQE---Q 174 (299)
Q Consensus 103 ~~~vVyvsfGS~~~~-~~~~~~~l~~al~~~~~-~~iw~~~~~~~~~~~~~l~~~~~~~~---~~n~~v~~~~pq~---~ 174 (299)
++++|++.+|..... ..+.+..+++++..... .+.+++..+.. ....+ .....+. .+++.+.+..++. .
T Consensus 197 ~~~~vlv~~~r~~~~~~~k~~~~l~~al~~l~~~~~~vi~~~~~~--~~~~l-~~~~~~~~~~~~~v~~~~~~~~~~~~~ 273 (363)
T cd03786 197 PKKYILVTLHRVENVDDGEQLEEILEALAELAEEDVPVVFPNHPR--TRPRI-REAGLEFLGHHPNVLLISPLGYLYFLL 273 (363)
T ss_pred CCCEEEEEeCCccccCChHHHHHHHHHHHHHHhcCCEEEEECCCC--hHHHH-HHHHHhhccCCCCEEEECCcCHHHHHH
Confidence 456777788876433 35567778888765422 23333321100 00111 1111122 3577776655443 4
Q ss_pred hhcCCCcceEeeccCcchhhhhHhcCCcEEeccCcCCHHHHHHHHHHHhCceEEecCCCCHHHHHHHHHHHhcCC
Q 022321 175 VLLHPSVGAFLTHCGWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVKRGDIEALVKEMMEGD 249 (299)
Q Consensus 175 iL~~~~v~~fItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~l~~av~~ll~~~ 249 (299)
++..+++ ||+-.| +.+.|++++|+|+|.++.. |. +..+ .+.|++..+. -+.++|.+++.++++++
T Consensus 274 l~~~ad~--~v~~Sg-gi~~Ea~~~g~PvI~~~~~--~~--~~~~-~~~g~~~~~~--~~~~~i~~~i~~ll~~~ 338 (363)
T cd03786 274 LLKNADL--VLTDSG-GIQEEASFLGVPVLNLRDR--TE--RPET-VESGTNVLVG--TDPEAILAAIEKLLSDE 338 (363)
T ss_pred HHHcCcE--EEEcCc-cHHhhhhhcCCCEEeeCCC--Cc--cchh-hheeeEEecC--CCHHHHHHHHHHHhcCc
Confidence 6778888 999999 7778999999999998743 22 3333 4567776654 25899999999999876
No 69
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=97.73 E-value=0.0034 Score=58.08 Aligned_cols=99 Identities=15% Similarity=0.179 Sum_probs=69.1
Q ss_pred cCCeEEEeecchh-hhhcCCCcceEeecc--CcchhhhhHhcCCcEEeccCcCCHHHHHHHHHHHhCceEEecCCCCHHH
Q 022321 161 KDRGLIVSWCNQE-QVLLHPSVGAFLTHC--GWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVKRGD 237 (299)
Q Consensus 161 ~~n~~v~~~~pq~-~iL~~~~v~~fItHg--G~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~ 237 (299)
++++.+.++.++. .++..+++-++.++. ...+++||+++|+|+|+.....- ....+ ..-..|..+. .-+.++
T Consensus 260 ~~~v~~~g~~~~~~~~~~~ad~~v~~S~~Eg~~~~~lEAma~G~PvI~~~~~~g---~~~~v-~~~~~G~lv~-~~d~~~ 334 (372)
T cd04949 260 EDYVFLKGYTRDLDEVYQKAQLSLLTSQSEGFGLSLMEALSHGLPVISYDVNYG---PSEII-EDGENGYLVP-KGDIEA 334 (372)
T ss_pred cceEEEcCCCCCHHHHHhhhhEEEecccccccChHHHHHHhCCCCEEEecCCCC---cHHHc-ccCCCceEeC-CCcHHH
Confidence 4567777776654 489999985555653 35689999999999999754311 23344 5556777775 468999
Q ss_pred HHHHHHHHhcCCh-hHHHHHHHHHHHHH
Q 022321 238 IEALVKEMMEGDE-GKKMRQKAWEWKKK 264 (299)
Q Consensus 238 l~~av~~ll~~~~-~~~~r~~a~~l~~~ 264 (299)
+.++|.+++++++ ..++.+++.+..+.
T Consensus 335 la~~i~~ll~~~~~~~~~~~~a~~~~~~ 362 (372)
T cd04949 335 LAEAIIELLNDPKLLQKFSEAAYENAER 362 (372)
T ss_pred HHHHHHHHHcCHHHHHHHHHHHHHHHHH
Confidence 9999999999862 34566666655444
No 70
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=97.69 E-value=0.0015 Score=60.65 Aligned_cols=147 Identities=14% Similarity=0.156 Sum_probs=87.1
Q ss_pred ceEEEeecCCcccCHHHHHHHHHHHHcC--CCCEEEEEcCCCCCCCCcCCChhhhh--hhcCCeEEEeecch--h---hh
Q 022321 105 SVVYVNYGSVTVMSEQHLTEFAWGLANS--KRPFLWILRPDVVMGDSVVLPDEYFE--EIKDRGLIVSWCNQ--E---QV 175 (299)
Q Consensus 105 ~vVyvsfGS~~~~~~~~~~~l~~al~~~--~~~~iw~~~~~~~~~~~~~l~~~~~~--~~~~n~~v~~~~pq--~---~i 175 (299)
+.+++.+|.......+.+..+++++... +.+++. ++... ..+.+ ....+ .+++++.+.+|.++ . ..
T Consensus 180 ~~~i~~~Grl~~~~~k~~~~l~~a~~~~~~~~~l~i-vG~g~---~~~~l-~~~~~~~~l~~~v~f~G~~~~~~~~~~~~ 254 (359)
T PRK09922 180 PAVFLYVGRLKFEGQKNVKELFDGLSQTTGEWQLHI-IGDGS---DFEKC-KAYSRELGIEQRIIWHGWQSQPWEVVQQK 254 (359)
T ss_pred CcEEEEEEEEecccCcCHHHHHHHHHhhCCCeEEEE-EeCCc---cHHHH-HHHHHHcCCCCeEEEecccCCcHHHHHHH
Confidence 4556677776432233455667777654 344443 33221 00111 11111 23578888998754 2 24
Q ss_pred hcCCCcceEee--c--cCcchhhhhHhcCCcEEecc-CcCCHHHHHHHHHHHhCceEEecCCCCHHHHHHHHHHHhcCCh
Q 022321 176 LLHPSVGAFLT--H--CGWNSTMESICGGVPVICWP-FFAEQQTNCRYACTTWGIGMEVNHDVKRGDIEALVKEMMEGDE 250 (299)
Q Consensus 176 L~~~~v~~fIt--H--gG~~s~~Eal~~GvP~i~~P-~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~l~~av~~ll~~~~ 250 (299)
++.+++ ||. + |--.++.||+++|+|+|+.- ..+ ....+ +.-..|..+. .-+.+++.++|.++++|++
T Consensus 255 ~~~~d~--~v~~s~~Egf~~~~lEAma~G~Pvv~s~~~~g----~~eiv-~~~~~G~lv~-~~d~~~la~~i~~l~~~~~ 326 (359)
T PRK09922 255 IKNVSA--LLLTSKFEGFPMTLLEAMSYGIPCISSDCMSG----PRDII-KPGLNGELYT-PGNIDEFVGKLNKVISGEV 326 (359)
T ss_pred HhcCcE--EEECCcccCcChHHHHHHHcCCCEEEeCCCCC----hHHHc-cCCCceEEEC-CCCHHHHHHHHHHHHhCcc
Confidence 555676 553 3 22579999999999999976 432 22344 5555787775 4689999999999999885
Q ss_pred ---hHHHHHHHHHHHHH
Q 022321 251 ---GKKMRQKAWEWKKK 264 (299)
Q Consensus 251 ---~~~~r~~a~~l~~~ 264 (299)
...++++++++.+.
T Consensus 327 ~~~~~~~~~~~~~~~~~ 343 (359)
T PRK09922 327 KYQHDAIPNSIERFYEV 343 (359)
T ss_pred cCCHHHHHHHHHHhhHH
Confidence 23455555555554
No 71
>PRK10307 putative glycosyl transferase; Provisional
Probab=97.69 E-value=0.0038 Score=58.97 Aligned_cols=114 Identities=11% Similarity=0.080 Sum_probs=74.4
Q ss_pred CCeEEEeecchhh---hhcCCCcceEeeccCc------chhhhhHhcCCcEEeccCcCCHHHHHHHHHHHhCceEEecCC
Q 022321 162 DRGLIVSWCNQEQ---VLLHPSVGAFLTHCGW------NSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHD 232 (299)
Q Consensus 162 ~n~~v~~~~pq~~---iL~~~~v~~fItHgG~------~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~ 232 (299)
+|+.+.+|+|+.+ +++.+++..+.+..+. +.+.|++++|+|+|+....+.. ....+ + +.|+.+. .
T Consensus 284 ~~v~f~G~~~~~~~~~~~~~aDi~v~ps~~e~~~~~~p~kl~eama~G~PVi~s~~~g~~--~~~~i-~--~~G~~~~-~ 357 (412)
T PRK10307 284 PNVHFLPLQPYDRLPALLKMADCHLLPQKAGAADLVLPSKLTNMLASGRNVVATAEPGTE--LGQLV-E--GIGVCVE-P 357 (412)
T ss_pred CceEEeCCCCHHHHHHHHHhcCEeEEeeccCcccccCcHHHHHHHHcCCCEEEEeCCCch--HHHHH-h--CCcEEeC-C
Confidence 4788889998654 7889998666555442 2468999999999998754321 12233 3 7788776 3
Q ss_pred CCHHHHHHHHHHHhcCCh-hHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHh
Q 022321 233 VKRGDIEALVKEMMEGDE-GKKMRQKAWEWKKKAEAATAVGGQSYNNFDRLVKMVLH 288 (299)
Q Consensus 233 ~~~~~l~~av~~ll~~~~-~~~~r~~a~~l~~~~~~a~~~gg~s~~~l~~~v~~l~~ 288 (299)
-+.+++.++|.++++|++ ...+++++++..+ +.-+......++++.+.+
T Consensus 358 ~d~~~la~~i~~l~~~~~~~~~~~~~a~~~~~-------~~fs~~~~~~~~~~~~~~ 407 (412)
T PRK10307 358 ESVEALVAAIAALARQALLRPKLGTVAREYAE-------RTLDKENVLRQFIADIRG 407 (412)
T ss_pred CCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH-------HHcCHHHHHHHHHHHHHH
Confidence 578999999999998762 2345555554333 233444445555555443
No 72
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=97.66 E-value=0.0027 Score=57.99 Aligned_cols=93 Identities=14% Similarity=0.127 Sum_probs=63.4
Q ss_pred hcCCeEEEeecc-hh---hhhcCCCcceEeecc----CcchhhhhHhcCCcEEeccCcCCHHHHHHHHHHHhCceEEecC
Q 022321 160 IKDRGLIVSWCN-QE---QVLLHPSVGAFLTHC----GWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNH 231 (299)
Q Consensus 160 ~~~n~~v~~~~p-q~---~iL~~~~v~~fItHg----G~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~ 231 (299)
...++.+.+|++ +. .+++.+++ +|.-. ..++++||+++|+|+|+....+ ....+ ...+.|..+.
T Consensus 242 ~~~~v~~~g~~~~~~~~~~~~~~ad~--~l~ps~~e~~g~~~~Eam~~g~PvI~~~~~~----~~e~~-~~~~~g~~~~- 313 (365)
T cd03825 242 LPFPVHYLGSLNDDESLALIYSAADV--FVVPSLQENFPNTAIEALACGTPVVAFDVGG----IPDIV-DHGVTGYLAK- 313 (365)
T ss_pred CCCceEecCCcCCHHHHHHHHHhCCE--EEeccccccccHHHHHHHhcCCCEEEecCCC----Chhhe-eCCCceEEeC-
Confidence 356778889988 43 47888888 76643 3579999999999999876532 22233 3435676665
Q ss_pred CCCHHHHHHHHHHHhcCCh-hHHHHHHHHH
Q 022321 232 DVKRGDIEALVKEMMEGDE-GKKMRQKAWE 260 (299)
Q Consensus 232 ~~~~~~l~~av~~ll~~~~-~~~~r~~a~~ 260 (299)
..+.+++.+++.+++++++ ...+.+++++
T Consensus 314 ~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~ 343 (365)
T cd03825 314 PGDPEDLAEGIEWLLADPDEREELGEAARE 343 (365)
T ss_pred CCCHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 3578999999999998773 2233444433
No 73
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=97.65 E-value=0.0019 Score=58.31 Aligned_cols=79 Identities=15% Similarity=0.228 Sum_probs=55.7
Q ss_pred cCCeEEEeecch-hhhhcCCCcceEeeccC----cchhhhhHhcCCcEEeccCcCCHHHHHHHHHHHhCceEEecCCCCH
Q 022321 161 KDRGLIVSWCNQ-EQVLLHPSVGAFLTHCG----WNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVKR 235 (299)
Q Consensus 161 ~~n~~v~~~~pq-~~iL~~~~v~~fItHgG----~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~ 235 (299)
..++.+.+.... ..+++.+++ +|.... -+++.||+++|+|+|+... ..+...+ .+ .|..+. .-+.
T Consensus 250 ~~~v~~~g~~~~~~~~~~~adi--~v~ps~~e~~~~~~~Ea~a~g~PvI~~~~----~~~~e~~-~~--~g~~~~-~~~~ 319 (365)
T cd03807 250 EDKVILLGERSDVPALLNALDV--FVLSSLSEGFPNVLLEAMACGLPVVATDV----GDNAELV-GD--TGFLVP-PGDP 319 (365)
T ss_pred CceEEEccccccHHHHHHhCCE--EEeCCccccCCcHHHHHHhcCCCEEEcCC----CChHHHh-hc--CCEEeC-CCCH
Confidence 355666554443 458888888 765443 4799999999999998654 3345555 44 555554 3478
Q ss_pred HHHHHHHHHHhcCC
Q 022321 236 GDIEALVKEMMEGD 249 (299)
Q Consensus 236 ~~l~~av~~ll~~~ 249 (299)
+++.+++.++++++
T Consensus 320 ~~l~~~i~~l~~~~ 333 (365)
T cd03807 320 EALAEAIEALLADP 333 (365)
T ss_pred HHHHHHHHHHHhCh
Confidence 99999999999876
No 74
>KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=97.63 E-value=0.0015 Score=63.51 Aligned_cols=138 Identities=19% Similarity=0.282 Sum_probs=91.9
Q ss_pred CCCceEEEeecCCcccCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCcCCChhhhhh------hcCCeEEEeecchhh-
Q 022321 102 DANSVVYVNYGSVTVMSEQHLTEFAWGLANSKRPFLWILRPDVVMGDSVVLPDEYFEE------IKDRGLIVSWCNQEQ- 174 (299)
Q Consensus 102 ~~~~vVyvsfGS~~~~~~~~~~~l~~al~~~~~~~iw~~~~~~~~~~~~~l~~~~~~~------~~~n~~v~~~~pq~~- 174 (299)
++..|||.+|--...++++.++.-++-|+..+-.++|..+....-+ ..|... -|+++.+.+-++..+
T Consensus 756 p~d~vvf~~FNqLyKidP~~l~~W~~ILk~VPnS~LwllrfPa~ge------~rf~ty~~~~Gl~p~riifs~va~k~eH 829 (966)
T KOG4626|consen 756 PEDAVVFCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAVGE------QRFRTYAEQLGLEPDRIIFSPVAAKEEH 829 (966)
T ss_pred CCCeEEEeechhhhcCCHHHHHHHHHHHHhCCcceeEEEeccccch------HHHHHHHHHhCCCccceeeccccchHHH
Confidence 3567999999998889999999999999999999999998553211 122111 156777666655433
Q ss_pred ----hhcCCCcceEeeccCcchhhhhHhcCCcEEeccCcCCHHHHHHHHHHHhCceEEecCCCCHHHHHHHHHHHhcC
Q 022321 175 ----VLLHPSVGAFLTHCGWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVKRGDIEALVKEMMEG 248 (299)
Q Consensus 175 ----iL~~~~v~~fItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~l~~av~~ll~~ 248 (299)
.|..-.+.-+.+. |+.|.++.++.|||||.+|.-.--...|..+....|+|..+-+ +.++-.+.--++-.|
T Consensus 830 vrr~~LaDv~LDTplcn-GhTTg~dvLw~GvPmVTmpge~lAsrVa~Sll~~~Gl~hliak--~~eEY~~iaV~Latd 904 (966)
T KOG4626|consen 830 VRRGQLADVCLDTPLCN-GHTTGMDVLWAGVPMVTMPGETLASRVAASLLTALGLGHLIAK--NREEYVQIAVRLATD 904 (966)
T ss_pred HHhhhhhhhcccCcCcC-CcccchhhhccCCceeecccHHHHHHHHHHHHHHcccHHHHhh--hHHHHHHHHHHhhcC
Confidence 3433334446665 7889999999999999999865544544444477888886653 444433333334334
No 75
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=97.60 E-value=0.0036 Score=57.58 Aligned_cols=93 Identities=17% Similarity=0.159 Sum_probs=64.5
Q ss_pred cCCeEEEeecchh-hhhcCCCcceEe--e--ccCcchhhhhHhcCCcEEeccCcCCHHHHHHHHHHHhCceEEecCCCCH
Q 022321 161 KDRGLIVSWCNQE-QVLLHPSVGAFL--T--HCGWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVKR 235 (299)
Q Consensus 161 ~~n~~v~~~~pq~-~iL~~~~v~~fI--t--HgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~ 235 (299)
.+++.+.++.++. .+++.+++ +| + -|.-.++.||+++|+|+|+.... ..+..+ ++-..|..++ .-+.
T Consensus 252 ~~~v~~~g~~~~~~~~~~~~d~--~v~ps~~E~~~~~~~EAma~g~PvI~s~~~----~~~e~i-~~~~~G~~~~-~~~~ 323 (371)
T cd04962 252 QDDVLFLGKQDHVEELLSIADL--FLLPSEKESFGLAALEAMACGVPVVASNAG----GIPEVV-KHGETGFLVD-VGDV 323 (371)
T ss_pred CceEEEecCcccHHHHHHhcCE--EEeCCCcCCCccHHHHHHHcCCCEEEeCCC----Cchhhh-cCCCceEEcC-CCCH
Confidence 4577788877654 58888888 55 2 23346999999999999996553 344455 5545676665 3478
Q ss_pred HHHHHHHHHHhcCCh-hHHHHHHHHHH
Q 022321 236 GDIEALVKEMMEGDE-GKKMRQKAWEW 261 (299)
Q Consensus 236 ~~l~~av~~ll~~~~-~~~~r~~a~~l 261 (299)
+++.+++.++++++. ..++++++++.
T Consensus 324 ~~l~~~i~~l~~~~~~~~~~~~~~~~~ 350 (371)
T cd04962 324 EAMAEYALSLLEDDELWQEFSRAARNR 350 (371)
T ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 999999999998763 23455555554
No 76
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=97.59 E-value=0.0055 Score=55.67 Aligned_cols=82 Identities=15% Similarity=0.169 Sum_probs=55.8
Q ss_pred hcCCeEEEeecchh---hhhcCCCcceEeec--cCcchhhhhHhcCCcEEeccCcCCHHHHHHHHHHHhCceEEecCCCC
Q 022321 160 IKDRGLIVSWCNQE---QVLLHPSVGAFLTH--CGWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVK 234 (299)
Q Consensus 160 ~~~n~~v~~~~pq~---~iL~~~~v~~fItH--gG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~ 234 (299)
.++++.+.+++|+. .+++.+++-.+-+. +..++++||+++|+|+|+....+ ....+ .. .|..+. .-+
T Consensus 251 ~~~~v~~~g~~~~~~~~~~~~~~d~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~----~~e~~-~~--~~~~~~-~~~ 322 (365)
T cd03809 251 LGDRVRFLGYVSDEELAALYRGARAFVFPSLYEGFGLPVLEAMACGTPVIASNISS----LPEVA-GD--AALYFD-PLD 322 (365)
T ss_pred CCCeEEECCCCChhHHHHHHhhhhhhcccchhccCCCCHHHHhcCCCcEEecCCCC----cccee-cC--ceeeeC-CCC
Confidence 45788889999875 47888887333222 23468999999999999965421 12222 22 344443 347
Q ss_pred HHHHHHHHHHHhcCC
Q 022321 235 RGDIEALVKEMMEGD 249 (299)
Q Consensus 235 ~~~l~~av~~ll~~~ 249 (299)
.+++.+++.++++|+
T Consensus 323 ~~~~~~~i~~l~~~~ 337 (365)
T cd03809 323 PEALAAAIERLLEDP 337 (365)
T ss_pred HHHHHHHHHHHhcCH
Confidence 899999999999887
No 77
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=97.48 E-value=0.0062 Score=56.47 Aligned_cols=80 Identities=13% Similarity=0.084 Sum_probs=57.3
Q ss_pred CCeEEEeecch-hhhhcCCCcceEe--ec--cCcchhhhhHhcCCcEEeccCcCCHHHHHHHHHHHhCceEEecCCCCHH
Q 022321 162 DRGLIVSWCNQ-EQVLLHPSVGAFL--TH--CGWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVKRG 236 (299)
Q Consensus 162 ~n~~v~~~~pq-~~iL~~~~v~~fI--tH--gG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~ 236 (299)
.++.+.++..+ ..+++.+++ || |+ |--++++||+++|+|+|+....+ +...+ +.-..|..+. .-+.+
T Consensus 255 ~~v~~~g~~~~~~~~~~~adi--~v~pS~~Eg~~~~~lEAma~G~Pvv~s~~~g----~~e~i-~~~~~g~~~~-~~d~~ 326 (374)
T TIGR03088 255 HLVWLPGERDDVPALMQALDL--FVLPSLAEGISNTILEAMASGLPVIATAVGG----NPELV-QHGVTGALVP-PGDAV 326 (374)
T ss_pred ceEEEcCCcCCHHHHHHhcCE--EEeccccccCchHHHHHHHcCCCEEEcCCCC----cHHHh-cCCCceEEeC-CCCHH
Confidence 45556565443 458999998 65 43 33579999999999999977533 34444 4445677765 35789
Q ss_pred HHHHHHHHHhcCC
Q 022321 237 DIEALVKEMMEGD 249 (299)
Q Consensus 237 ~l~~av~~ll~~~ 249 (299)
++.++|.++++++
T Consensus 327 ~la~~i~~l~~~~ 339 (374)
T TIGR03088 327 ALARALQPYVSDP 339 (374)
T ss_pred HHHHHHHHHHhCH
Confidence 9999999999876
No 78
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=97.46 E-value=0.0037 Score=59.39 Aligned_cols=91 Identities=13% Similarity=0.196 Sum_probs=63.8
Q ss_pred CCeEEE-eecchhh---hhcCCCcceEee----ccC---cchhhhhHhcCCcEEeccCcCCHHHHHHHHHHHhCceEEec
Q 022321 162 DRGLIV-SWCNQEQ---VLLHPSVGAFLT----HCG---WNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVN 230 (299)
Q Consensus 162 ~n~~v~-~~~pq~~---iL~~~~v~~fIt----HgG---~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~ 230 (299)
+++.+. +|+|..+ +|+.+++ ++. .-| -+.++||+++|+|+|+.... .....+ ++-+.|..+.
T Consensus 294 ~~~~~~~g~~~~~~~~~~l~~aDv--~v~~~~~~~~~~~p~~~~Eama~G~PVI~s~~~----~~~eiv-~~~~~G~lv~ 366 (415)
T cd03816 294 KKVTIRTPWLSAEDYPKLLASADL--GVSLHTSSSGLDLPMKVVDMFGCGLPVCALDFK----CIDELV-KHGENGLVFG 366 (415)
T ss_pred CcEEEEcCcCCHHHHHHHHHhCCE--EEEccccccccCCcHHHHHHHHcCCCEEEeCCC----CHHHHh-cCCCCEEEEC
Confidence 355544 6887554 7888998 663 112 34799999999999996542 344555 6667888874
Q ss_pred CCCCHHHHHHHHHHHhcC---C-hhHHHHHHHHHHH
Q 022321 231 HDVKRGDIEALVKEMMEG---D-EGKKMRQKAWEWK 262 (299)
Q Consensus 231 ~~~~~~~l~~av~~ll~~---~-~~~~~r~~a~~l~ 262 (299)
+.+++.++|.++++| + ..+.|++++++..
T Consensus 367 ---d~~~la~~i~~ll~~~~~~~~~~~m~~~~~~~~ 399 (415)
T cd03816 367 ---DSEELAEQLIDLLSNFPNRGKLNSLKKGAQEES 399 (415)
T ss_pred ---CHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhh
Confidence 799999999999998 4 2345666665554
No 79
>COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=97.44 E-value=0.0023 Score=56.72 Aligned_cols=132 Identities=10% Similarity=0.079 Sum_probs=94.8
Q ss_pred eEEEeecCCcccCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCcCCChhhhhhh--cCCeEEEeecc-hhhhhcCCCcc
Q 022321 106 VVYVNYGSVTVMSEQHLTEFAWGLANSKRPFLWILRPDVVMGDSVVLPDEYFEEI--KDRGLIVSWCN-QEQVLLHPSVG 182 (299)
Q Consensus 106 vVyvsfGS~~~~~~~~~~~l~~al~~~~~~~iw~~~~~~~~~~~~~l~~~~~~~~--~~n~~v~~~~p-q~~iL~~~~v~ 182 (299)
-|+|++|-. .+.....+++..|.+.++.+-.+++... .-.+....+. .+|..+..... ...++..+++
T Consensus 160 ~ilI~lGGs--Dpk~lt~kvl~~L~~~~~nl~iV~gs~~------p~l~~l~k~~~~~~~i~~~~~~~dma~LMke~d~- 230 (318)
T COG3980 160 DILITLGGS--DPKNLTLKVLAELEQKNVNLHIVVGSSN------PTLKNLRKRAEKYPNINLYIDTNDMAELMKEADL- 230 (318)
T ss_pred eEEEEccCC--ChhhhHHHHHHHhhccCeeEEEEecCCC------cchhHHHHHHhhCCCeeeEecchhHHHHHHhcch-
Confidence 488999865 2345567788888887777666766221 1112222222 35666655554 4469999998
Q ss_pred eEeeccCcchhhhhHhcCCcEEeccCcCCHHHHHHHHHHHhCceEEecCCCCHHHHHHHHHHHhcCC
Q 022321 183 AFLTHCGWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVKRGDIEALVKEMMEGD 249 (299)
Q Consensus 183 ~fItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~l~~av~~ll~~~ 249 (299)
.|+-+|. |++|++.-|+|.+++|+...|-.-|+.. +..|+-..+.-.++.+....-+.+++.|.
T Consensus 231 -aI~AaGs-tlyEa~~lgvP~l~l~~a~NQ~~~a~~f-~~lg~~~~l~~~l~~~~~~~~~~~i~~d~ 294 (318)
T COG3980 231 -AISAAGS-TLYEALLLGVPSLVLPLAENQIATAKEF-EALGIIKQLGYHLKDLAKDYEILQIQKDY 294 (318)
T ss_pred -heeccch-HHHHHHHhcCCceEEeeeccHHHHHHHH-HhcCchhhccCCCchHHHHHHHHHhhhCH
Confidence 9998775 8999999999999999999999999999 88888877754456666666677777765
No 80
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=97.44 E-value=0.018 Score=56.21 Aligned_cols=98 Identities=12% Similarity=0.134 Sum_probs=66.8
Q ss_pred cCCeEEEeecchhhhhcCCCcceEee---ccC-cchhhhhHhcCCcEEeccCcCCHHHHHHHHHHHhCceEEecC---CC
Q 022321 161 KDRGLIVSWCNQEQVLLHPSVGAFLT---HCG-WNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNH---DV 233 (299)
Q Consensus 161 ~~n~~v~~~~pq~~iL~~~~v~~fIt---HgG-~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~---~~ 233 (299)
.+++.+.++.+...++..+++ ||. .=| ..+++||+++|+|+|+..... .+...+ +.-..|..+.. .-
T Consensus 375 ~~~V~f~G~~~~~~~~~~adv--~v~pS~~Egfgl~~lEAma~G~PVI~~dv~~---G~~eiI-~~g~nG~lv~~~~~~~ 448 (500)
T TIGR02918 375 QDYIHLKGHRNLSEVYKDYEL--YLSASTSEGFGLTLMEAVGSGLGMIGFDVNY---GNPTFI-EDNKNGYLIPIDEEED 448 (500)
T ss_pred CCeEEEcCCCCHHHHHHhCCE--EEEcCccccccHHHHHHHHhCCCEEEecCCC---CCHHHc-cCCCCEEEEeCCcccc
Confidence 456777888877889999988 654 233 368999999999999976531 123344 44456777752 12
Q ss_pred C----HHHHHHHHHHHhcCChhHHHHHHHHHHHHH
Q 022321 234 K----RGDIEALVKEMMEGDEGKKMRQKAWEWKKK 264 (299)
Q Consensus 234 ~----~~~l~~av~~ll~~~~~~~~r~~a~~l~~~ 264 (299)
+ .+.++++|.++++++....|.++|.+.++.
T Consensus 449 d~~~~~~~la~~I~~ll~~~~~~~~~~~a~~~a~~ 483 (500)
T TIGR02918 449 DEDQIITALAEKIVEYFNSNDIDAFHEYSYQIAEG 483 (500)
T ss_pred chhHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHh
Confidence 2 788999999999654445566666665444
No 81
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A.
Probab=97.41 E-value=0.00086 Score=52.75 Aligned_cols=80 Identities=16% Similarity=0.232 Sum_probs=50.9
Q ss_pred cCCeEEEeecchh-hhhcCCCcceEeecc--C-cchhhhhHhcCCcEEeccCcCCHHHHHHHHHHHhCceEEecCCCCHH
Q 022321 161 KDRGLIVSWCNQE-QVLLHPSVGAFLTHC--G-WNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVKRG 236 (299)
Q Consensus 161 ~~n~~v~~~~pq~-~iL~~~~v~~fItHg--G-~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~ 236 (299)
.+|+.+.+|++.. .+++.+++....+.. | -+++.|++++|+|+|+.+.. ..... +..+.|..+. -+.+
T Consensus 52 ~~~v~~~g~~~e~~~~l~~~dv~l~p~~~~~~~~~k~~e~~~~G~pvi~~~~~-----~~~~~-~~~~~~~~~~--~~~~ 123 (135)
T PF13692_consen 52 RPNVRFHGFVEELPEILAAADVGLIPSRFNEGFPNKLLEAMAAGKPVIASDNG-----AEGIV-EEDGCGVLVA--NDPE 123 (135)
T ss_dssp HCTEEEE-S-HHHHHHHHC-SEEEE-BSS-SCC-HHHHHHHCTT--EEEEHHH-----CHCHS----SEEEE-T--T-HH
T ss_pred CCCEEEcCCHHHHHHHHHhCCEEEEEeeCCCcCcHHHHHHHHhCCCEEECCcc-----hhhhe-eecCCeEEEC--CCHH
Confidence 5699999998643 489999997765532 2 48999999999999998771 12223 4467787773 4999
Q ss_pred HHHHHHHHHhcC
Q 022321 237 DIEALVKEMMEG 248 (299)
Q Consensus 237 ~l~~av~~ll~~ 248 (299)
++.+++.++++|
T Consensus 124 ~l~~~i~~l~~d 135 (135)
T PF13692_consen 124 ELAEAIERLLND 135 (135)
T ss_dssp HHHHHHHHHHH-
T ss_pred HHHHHHHHHhcC
Confidence 999999999875
No 82
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=97.39 E-value=0.026 Score=52.72 Aligned_cols=183 Identities=14% Similarity=0.040 Sum_probs=97.0
Q ss_pred HhhccCccEEEEcCcccccHHHHHHHHhcCCCEEEeCcccCCcccccccccccCCCCCcccchhhhHhhccCCCCceEEE
Q 022321 30 AQNCFRSSAIIFNTFDEFEHAALEVIASKFPNIYTVGPLPLLCKQVDETKFRSFGSSLWKEDTDCLKWLDKRDANSVVYV 109 (299)
Q Consensus 30 ~~~~~~~~~~l~ns~~~LE~~~~~~~r~~~p~v~~VGpl~~~~~~~~~~~~~~l~~~~~~~~~~~~~wl~~~~~~~vVyv 109 (299)
...++++|.++..| ....+..+...++++.|..-.....-. +.+. ...... .+... +..+.+
T Consensus 148 ~~~~~~ad~vi~~S-----~~l~~~~~~~~~~i~~i~ngvd~~~f~------~~~~----~~~~~~-~~~~~--~~~~i~ 209 (373)
T cd04950 148 RRLLKRADLVFTTS-----PSLYEAKRRLNPNVVLVPNGVDYEHFA------AARD----PPPPPA-DLAAL--PRPVIG 209 (373)
T ss_pred HHHHHhCCEEEECC-----HHHHHHHhhCCCCEEEcccccCHHHhh------cccc----cCCChh-HHhcC--CCCEEE
Confidence 33457899999988 444455555546777765432211000 0000 000001 11121 233556
Q ss_pred eecCCcc-cCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCcCCChhhhhhhcCCeEEEeecchhh---hhcCCCcceEe
Q 022321 110 NYGSVTV-MSEQHLTEFAWGLANSKRPFLWILRPDVVMGDSVVLPDEYFEEIKDRGLIVSWCNQEQ---VLLHPSVGAFL 185 (299)
Q Consensus 110 sfGS~~~-~~~~~~~~l~~al~~~~~~~iw~~~~~~~~~~~~~l~~~~~~~~~~n~~v~~~~pq~~---iL~~~~v~~fI 185 (299)
.+|++.. ...+.+..+++. ..+..|+++-..... .....+ ...+|+.+.+++|+.+ .++++++..+-
T Consensus 210 y~G~l~~~~d~~ll~~la~~--~p~~~~vliG~~~~~-----~~~~~~--~~~~nV~~~G~~~~~~l~~~l~~~Dv~l~P 280 (373)
T cd04950 210 YYGAIAEWLDLELLEALAKA--RPDWSFVLIGPVDVS-----IDPSAL--LRLPNVHYLGPKPYKELPAYLAGFDVAILP 280 (373)
T ss_pred EEeccccccCHHHHHHHHHH--CCCCEEEEECCCcCc-----cChhHh--ccCCCEEEeCCCCHHHHHHHHHhCCEEecC
Confidence 6788853 333334333332 245665554322000 000111 1137899999998654 78888884432
Q ss_pred ------eccCc-chhhhhHhcCCcEEeccCcCCHHHHHHHHHHHhCceEEecCCCCHHHHHHHHHHHhcCC
Q 022321 186 ------THCGW-NSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVKRGDIEALVKEMMEGD 249 (299)
Q Consensus 186 ------tHgG~-~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~l~~av~~ll~~~ 249 (299)
+.++. +.++|++++|+|+|+.++ .... +..+.+.... -+.+++.++|.+++.++
T Consensus 281 ~~~~~~~~~~~P~Kl~EylA~G~PVVat~~-------~~~~-~~~~~~~~~~--~d~~~~~~ai~~~l~~~ 341 (373)
T cd04950 281 FRLNELTRATSPLKLFEYLAAGKPVVATPL-------PEVR-RYEDEVVLIA--DDPEEFVAAIEKALLED 341 (373)
T ss_pred CccchhhhcCCcchHHHHhccCCCEEecCc-------HHHH-hhcCcEEEeC--CCHHHHHHHHHHHHhcC
Confidence 22332 458999999999998764 1222 3333333333 37999999999987654
No 83
>PRK14089 ipid-A-disaccharide synthase; Provisional
Probab=97.38 E-value=0.001 Score=61.63 Aligned_cols=216 Identities=13% Similarity=0.073 Sum_probs=120.5
Q ss_pred HhhccCccEEEEcCcccccHHHHHHHHhc---CCCEEEeCcccCCcc--ccc------ccccccCC--CCCc------cc
Q 022321 30 AQNCFRSSAIIFNTFDEFEHAALEVIASK---FPNIYTVGPLPLLCK--QVD------ETKFRSFG--SSLW------KE 90 (299)
Q Consensus 30 ~~~~~~~~~~l~ns~~~LE~~~~~~~r~~---~p~v~~VGpl~~~~~--~~~------~~~~~~l~--~~~~------~~ 90 (299)
.+...+-|++++=.+|++-.......+.. .|-+|||.|-.+-=+ ... +.-+.-+| .+++ ..
T Consensus 71 ~~~~~~pd~~i~iD~p~Fnl~lak~~k~~~~~i~viyyi~PqvWAWr~~R~~~i~k~~d~vl~ifPFE~~~yg~~~~~VG 150 (347)
T PRK14089 71 VELAKQADKVLLMDSSSFNIPLAKKIKKAYPKKEIIYYILPQVWAWKKGRAKILEKYCDFLASILPFEVQFYQSKATYVG 150 (347)
T ss_pred HHHhcCCCEEEEeCCCCCCHHHHHHHHhcCCCCCEEEEECccceeeCcchHHHHHHHHhhhhccCCCCHHHhCCCCEEEC
Confidence 33346889999988899998888888876 567999999865311 100 00000011 0000 00
Q ss_pred c---hhhhHhhccCCCCceEEEeecCCcccCHHHHHHHHHHHHc---CCCCEEEEEcCCCCCCCCcCCChhhhhhhcC--
Q 022321 91 D---TDCLKWLDKRDANSVVYVNYGSVTVMSEQHLTEFAWGLAN---SKRPFLWILRPDVVMGDSVVLPDEYFEEIKD-- 162 (299)
Q Consensus 91 ~---~~~~~wl~~~~~~~vVyvsfGS~~~~~~~~~~~l~~al~~---~~~~~iw~~~~~~~~~~~~~l~~~~~~~~~~-- 162 (299)
. +.+...-+..+++++|.+--||...--...+-.++++... ....|++. .... . +.+.+...+
T Consensus 151 hPl~d~~~~~~~~~~~~~~I~llPGSR~~Ei~~llP~~~~aa~~L~~~~~~~~i~-~a~~-------~-~~i~~~~~~~~ 221 (347)
T PRK14089 151 HPLLDEIKEFKKDLDKEGTIAFMPGSRKSEIKRLMPIFKELAKKLEGKEKILVVP-SFFK-------G-KDLKEIYGDIS 221 (347)
T ss_pred CcHHHhhhhhhhhcCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHhhcCcEEEEe-CCCc-------H-HHHHHHHhcCC
Confidence 0 0111010111234789999999853323444434444432 22223222 2110 0 122222211
Q ss_pred CeEEEeecchhhhhcCCCcceEeeccCcchhhhhHhcCCcEEeccC--cCCHHHHHHHHHH---HhCceEEe------c-
Q 022321 163 RGLIVSWCNQEQVLLHPSVGAFLTHCGWNSTMESICGGVPVICWPF--FAEQQTNCRYACT---TWGIGMEV------N- 230 (299)
Q Consensus 163 n~~v~~~~pq~~iL~~~~v~~fItHgG~~s~~Eal~~GvP~i~~P~--~~DQ~~na~~v~~---~~g~G~~l------~- 230 (299)
...+.+ .-.++++.+++ .|+-.|..|+ |++.+|+|||+ ++ ..-|+.||+++ . ..|+.-.+ +
T Consensus 222 ~~~~~~--~~~~~m~~aDl--al~~SGT~TL-E~al~g~P~Vv-~Yk~~~lty~iak~l-v~~~~igL~Nii~~~~~~~~ 294 (347)
T PRK14089 222 EFEISY--DTHKALLEAEF--AFICSGTATL-EAALIGTPFVL-AYKAKAIDYFIAKMF-VKLKHIGLANIFFDFLGKEP 294 (347)
T ss_pred CcEEec--cHHHHHHhhhH--HHhcCcHHHH-HHHHhCCCEEE-EEeCCHHHHHHHHHH-HcCCeeehHHHhcCCCcccc
Confidence 222232 33468999999 9999999999 99999999998 55 33678899998 6 55555444 1
Q ss_pred -------CCCCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHH
Q 022321 231 -------HDVKRGDIEALVKEMMEGDEGKKMRQKAWEWKKKA 265 (299)
Q Consensus 231 -------~~~~~~~l~~av~~ll~~~~~~~~r~~a~~l~~~~ 265 (299)
.+.|++.|.+++.+. . .+++++...++++.+
T Consensus 295 vvPEllQ~~~t~~~la~~i~~~-~---~~~~~~~~~~l~~~l 332 (347)
T PRK14089 295 LHPELLQEFVTVENLLKAYKEM-D---REKFFKKSKELREYL 332 (347)
T ss_pred cCchhhcccCCHHHHHHHHHHH-H---HHHHHHHHHHHHHHh
Confidence 158999999988771 1 124555555555553
No 84
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=97.37 E-value=0.005 Score=56.13 Aligned_cols=128 Identities=11% Similarity=0.056 Sum_probs=75.0
Q ss_pred CceEEEeecCCcc-cCHHHHHHHHHHHHc--CCCCEEEEEcCCCCCCCCcCCChhhh---hh--hcCCeEEEeecch-hh
Q 022321 104 NSVVYVNYGSVTV-MSEQHLTEFAWGLAN--SKRPFLWILRPDVVMGDSVVLPDEYF---EE--IKDRGLIVSWCNQ-EQ 174 (299)
Q Consensus 104 ~~vVyvsfGS~~~-~~~~~~~~l~~al~~--~~~~~iw~~~~~~~~~~~~~l~~~~~---~~--~~~n~~v~~~~pq-~~ 174 (299)
+..+++..|+... ...+.+.+.+..+.+ .+.+++++-.+. ..+.+. +. ..+++.+.++..+ ..
T Consensus 187 ~~~~~l~~g~~~~~kg~~~li~a~~~l~~~~~~~~l~i~G~g~--------~~~~~~~~~~~~~~~~~v~~~g~~~~~~~ 258 (360)
T cd04951 187 DTFVILAVGRLVEAKDYPNLLKAFAKLLSDYLDIKLLIAGDGP--------LRATLERLIKALGLSNRVKLLGLRDDIAA 258 (360)
T ss_pred CCEEEEEEeeCchhcCcHHHHHHHHHHHhhCCCeEEEEEcCCC--------cHHHHHHHHHhcCCCCcEEEecccccHHH
Confidence 3456777777632 222333333333332 256666654322 111221 11 2457888887654 45
Q ss_pred hhcCCCcceEeecc----CcchhhhhHhcCCcEEeccCcCCHHHHHHHHHHHhCceEEecCCCCHHHHHHHHHHHhcCC
Q 022321 175 VLLHPSVGAFLTHC----GWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVKRGDIEALVKEMMEGD 249 (299)
Q Consensus 175 iL~~~~v~~fItHg----G~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~l~~av~~ll~~~ 249 (299)
+++.+++ ||.-. ..++++||+++|+|+|+.. ...+...+ +.. |..+. .-+.+++.+++.++++++
T Consensus 259 ~~~~ad~--~v~~s~~e~~~~~~~Ea~a~G~PvI~~~----~~~~~e~i-~~~--g~~~~-~~~~~~~~~~i~~ll~~~ 327 (360)
T cd04951 259 YYNAADL--FVLSSAWEGFGLVVAEAMACELPVVATD----AGGVREVV-GDS--GLIVP-ISDPEALANKIDEILKMS 327 (360)
T ss_pred HHHhhce--EEecccccCCChHHHHHHHcCCCEEEec----CCChhhEe-cCC--ceEeC-CCCHHHHHHHHHHHHhCC
Confidence 8888888 54432 2578999999999999854 34455555 443 44443 358899999999998543
No 85
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=97.36 E-value=0.0066 Score=56.39 Aligned_cols=142 Identities=12% Similarity=0.074 Sum_probs=80.5
Q ss_pred eEEEeecCCcccCHHHHHHHHHHHHcC--CCCEEEEEcCCCCCCCCcCCChhhhh---hhc---CCeEE-Eeecchh---
Q 022321 106 VVYVNYGSVTVMSEQHLTEFAWGLANS--KRPFLWILRPDVVMGDSVVLPDEYFE---EIK---DRGLI-VSWCNQE--- 173 (299)
Q Consensus 106 vVyvsfGS~~~~~~~~~~~l~~al~~~--~~~~iw~~~~~~~~~~~~~l~~~~~~---~~~---~n~~v-~~~~pq~--- 173 (299)
.+++..|.... .+.+..+++++... +..+++..+... ...+.+.+.+ ..+ .++.. .+++++.
T Consensus 202 ~~i~~~Grl~~--~Kg~~~li~a~~~l~~~~~l~i~g~g~~----~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 275 (388)
T TIGR02149 202 PYILFVGRITR--QKGVPHLLDAVHYIPKDVQVVLCAGAPD----TPEVAEEVRQAVALLDRNRTGIIWINKMLPKEELV 275 (388)
T ss_pred eEEEEEccccc--ccCHHHHHHHHHHHhhcCcEEEEeCCCC----cHHHHHHHHHHHHHhccccCceEEecCCCCHHHHH
Confidence 45556677642 23345566666553 556665544321 0001111111 111 23443 4667654
Q ss_pred hhhcCCCcceEeec----cCcchhhhhHhcCCcEEeccCcCCHHHHHHHHHHHhCceEEecC-CCC----HHHHHHHHHH
Q 022321 174 QVLLHPSVGAFLTH----CGWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNH-DVK----RGDIEALVKE 244 (299)
Q Consensus 174 ~iL~~~~v~~fItH----gG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~-~~~----~~~l~~av~~ 244 (299)
.++.++++ ||.= +...+++||+++|+|+|+.... .....+ +.-+.|..+.. +.+ .+++.++|.+
T Consensus 276 ~~~~~aDv--~v~ps~~e~~g~~~lEA~a~G~PvI~s~~~----~~~e~i-~~~~~G~~~~~~~~~~~~~~~~l~~~i~~ 348 (388)
T TIGR02149 276 ELLSNAEV--FVCPSIYEPLGIVNLEAMACGTPVVASATG----GIPEVV-VDGETGFLVPPDNSDADGFQAELAKAINI 348 (388)
T ss_pred HHHHhCCE--EEeCCccCCCChHHHHHHHcCCCEEEeCCC----CHHHHh-hCCCceEEcCCCCCcccchHHHHHHHHHH
Confidence 47888998 6642 2245789999999999997653 344555 55567888764 221 2889999999
Q ss_pred HhcCChh-HHHHHHHHH
Q 022321 245 MMEGDEG-KKMRQKAWE 260 (299)
Q Consensus 245 ll~~~~~-~~~r~~a~~ 260 (299)
+++|++. ..+.+++++
T Consensus 349 l~~~~~~~~~~~~~a~~ 365 (388)
T TIGR02149 349 LLADPELAKKMGIAGRK 365 (388)
T ss_pred HHhCHHHHHHHHHHHHH
Confidence 9987631 234444443
No 86
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=97.35 E-value=0.0066 Score=56.97 Aligned_cols=92 Identities=17% Similarity=0.104 Sum_probs=64.6
Q ss_pred cCCeEEEeecchh---hhhcCCCcceEee---ccC-cchhhhhHhcCCcEEeccCcCCHHHHHHHHHHHhCceEEecCCC
Q 022321 161 KDRGLIVSWCNQE---QVLLHPSVGAFLT---HCG-WNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDV 233 (299)
Q Consensus 161 ~~n~~v~~~~pq~---~iL~~~~v~~fIt---HgG-~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~ 233 (299)
.+++.+.+++|.. .+|+.+++ ||. +-| -.+++||+++|+|+|+....+ ....+ ..-+.|..+. .-
T Consensus 282 ~~~v~~~g~~~~~~~~~~l~~ad~--~v~ps~~E~~g~~~lEAma~G~Pvi~~~~~~----~~e~i-~~~~~g~~~~-~~ 353 (405)
T TIGR03449 282 ADRVRFLPPRPPEELVHVYRAADV--VAVPSYNESFGLVAMEAQACGTPVVAARVGG----LPVAV-ADGETGLLVD-GH 353 (405)
T ss_pred CceEEECCCCCHHHHHHHHHhCCE--EEECCCCCCcChHHHHHHHcCCCEEEecCCC----cHhhh-ccCCceEECC-CC
Confidence 4678888998865 47989988 653 223 358999999999999976533 33344 5556777765 35
Q ss_pred CHHHHHHHHHHHhcCCh-hHHHHHHHHH
Q 022321 234 KRGDIEALVKEMMEGDE-GKKMRQKAWE 260 (299)
Q Consensus 234 ~~~~l~~av~~ll~~~~-~~~~r~~a~~ 260 (299)
+.+++.++|.+++++++ ...+++++++
T Consensus 354 d~~~la~~i~~~l~~~~~~~~~~~~~~~ 381 (405)
T TIGR03449 354 DPADWADALARLLDDPRTRIRMGAAAVE 381 (405)
T ss_pred CHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 78999999999998763 2344444444
No 87
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=97.33 E-value=0.035 Score=53.07 Aligned_cols=83 Identities=11% Similarity=0.108 Sum_probs=58.2
Q ss_pred cCCeEEEeecchhh---hhcCC--CcceEeecc---C-cchhhhhHhcCCcEEeccCcCCHHHHHHHHHHHhCceEEecC
Q 022321 161 KDRGLIVSWCNQEQ---VLLHP--SVGAFLTHC---G-WNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNH 231 (299)
Q Consensus 161 ~~n~~v~~~~pq~~---iL~~~--~v~~fItHg---G-~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~ 231 (299)
.+++.+.+++++.+ +++.+ +..+||.-. | -.+++||+++|+|+|+....+ +...+ ..-..|+.+.
T Consensus 316 ~~~V~f~g~~~~~~~~~~~~~a~~~~Dv~v~pS~~E~fg~~~lEAma~G~PvV~s~~gg----~~eiv-~~~~~G~lv~- 389 (439)
T TIGR02472 316 YGKVAYPKHHRPDDVPELYRLAARSRGIFVNPALTEPFGLTLLEAAACGLPIVATDDGG----PRDII-ANCRNGLLVD- 389 (439)
T ss_pred CceEEecCCCCHHHHHHHHHHHhhcCCEEecccccCCcccHHHHHHHhCCCEEEeCCCC----cHHHh-cCCCcEEEeC-
Confidence 46777778877655 46544 123377543 3 469999999999999987633 33444 4445687775
Q ss_pred CCCHHHHHHHHHHHhcCC
Q 022321 232 DVKRGDIEALVKEMMEGD 249 (299)
Q Consensus 232 ~~~~~~l~~av~~ll~~~ 249 (299)
.-+.+++.++|.++++|+
T Consensus 390 ~~d~~~la~~i~~ll~~~ 407 (439)
T TIGR02472 390 VLDLEAIASALEDALSDS 407 (439)
T ss_pred CCCHHHHHHHHHHHHhCH
Confidence 357899999999999876
No 88
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional
Probab=97.31 E-value=0.002 Score=59.33 Aligned_cols=111 Identities=15% Similarity=0.273 Sum_probs=78.4
Q ss_pred hcCCeEEEeecchhhh---hcCCCcceEeecc-------Cc------chhhhhHhcCCcEEeccCcCCHHHHHHHHHHHh
Q 022321 160 IKDRGLIVSWCNQEQV---LLHPSVGAFLTHC-------GW------NSTMESICGGVPVICWPFFAEQQTNCRYACTTW 223 (299)
Q Consensus 160 ~~~n~~v~~~~pq~~i---L~~~~v~~fItHg-------G~------~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~ 223 (299)
..+|+.+.+|+|+.++ |+. +.+++...- .+ +-+.+.+++|+|+|+++. ...+..+ ++.
T Consensus 205 ~~~~V~f~G~~~~eel~~~l~~-~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G~PVI~~~~----~~~~~~V-~~~ 278 (333)
T PRK09814 205 NSANISYKGWFDPEELPNELSK-GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAGLPVIVWSK----AAIADFI-VEN 278 (333)
T ss_pred cCCCeEEecCCCHHHHHHHHhc-CcCeEEcCCCCCccchhhhhccchHHHHHHHHCCCCEEECCC----ccHHHHH-HhC
Confidence 3578999999998764 444 443332211 11 226778999999999754 5567777 888
Q ss_pred CceEEecCCCCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHH
Q 022321 224 GIGMEVNHDVKRGDIEALVKEMMEGDEGKKMRQKAWEWKKKAEAATAVGGQSYNNFDRLVK 284 (299)
Q Consensus 224 g~G~~l~~~~~~~~l~~av~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gg~s~~~l~~~v~ 284 (299)
++|+.++ +.+++.+++.++ ++++...|++|++++++.+|. |.--...+.+++.
T Consensus 279 ~~G~~v~---~~~el~~~l~~~-~~~~~~~m~~n~~~~~~~~~~----g~~~~~~~~~~~~ 331 (333)
T PRK09814 279 GLGFVVD---SLEELPEIIDNI-TEEEYQEMVENVKKISKLLRN----GYFTKKALVDAIK 331 (333)
T ss_pred CceEEeC---CHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHhc----chhHHHHHHHHHh
Confidence 9999987 677899999885 445577899999999999863 5555555555543
No 89
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=97.30 E-value=0.0053 Score=56.01 Aligned_cols=150 Identities=15% Similarity=0.091 Sum_probs=84.8
Q ss_pred CCceEEEeecCCcc-cCHHHHHHHHHHHHc--CCCCEEEEEcCCCCCCCCcCCChhh---hh--hhcCCeEEEeecch-h
Q 022321 103 ANSVVYVNYGSVTV-MSEQHLTEFAWGLAN--SKRPFLWILRPDVVMGDSVVLPDEY---FE--EIKDRGLIVSWCNQ-E 173 (299)
Q Consensus 103 ~~~vVyvsfGS~~~-~~~~~~~~l~~al~~--~~~~~iw~~~~~~~~~~~~~l~~~~---~~--~~~~n~~v~~~~pq-~ 173 (299)
++..+++..|.... ...+.+.+.+..+.+ .+..++++-.... ...+...+ .. ...+++.+.+|.+. .
T Consensus 183 ~~~~~i~~~Gr~~~~Kg~~~li~~~~~l~~~~~~~~l~ivG~~~~----~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~ 258 (355)
T cd03819 183 KGKPVILLPGRLTRWKGQEVFIEALARLKKDDPDVHLLIVGDAQG----RRFYYAELLELIKRLGLQDRVTFVGHCSDMP 258 (355)
T ss_pred CCceEEEEeeccccccCHHHHHHHHHHHHhcCCCeEEEEEECCcc----cchHHHHHHHHHHHcCCcceEEEcCCcccHH
Confidence 34456667777642 334555555555555 3445444432211 00111111 11 22467888888543 3
Q ss_pred hhhcCCCcceEeec--cC-cchhhhhHhcCCcEEeccCcCCHHHHHHHHHHHhCceEEecCCCCHHHHHHHHHHHhc-CC
Q 022321 174 QVLLHPSVGAFLTH--CG-WNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVKRGDIEALVKEMME-GD 249 (299)
Q Consensus 174 ~iL~~~~v~~fItH--gG-~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~l~~av~~ll~-~~ 249 (299)
.+++.+++-.+-++ -| .++++||+++|+|+|+....+ ....+ ..-+.|..+. .-+.+++.++|..++. ++
T Consensus 259 ~~l~~ad~~i~ps~~~e~~~~~l~EA~a~G~PvI~~~~~~----~~e~i-~~~~~g~~~~-~~~~~~l~~~i~~~~~~~~ 332 (355)
T cd03819 259 AAYALADIVVSASTEPEAFGRTAVEAQAMGRPVIASDHGG----ARETV-RPGETGLLVP-PGDAEALAQALDQILSLLP 332 (355)
T ss_pred HHHHhCCEEEecCCCCCCCchHHHHHHhcCCCEEEcCCCC----cHHHH-hCCCceEEeC-CCCHHHHHHHHHHHHhhCH
Confidence 58888998443342 23 369999999999999876532 33344 4545777775 4588999999976654 43
Q ss_pred h-hHHHHHHHHHHH
Q 022321 250 E-GKKMRQKAWEWK 262 (299)
Q Consensus 250 ~-~~~~r~~a~~l~ 262 (299)
+ ..+++++|++..
T Consensus 333 ~~~~~~~~~a~~~~ 346 (355)
T cd03819 333 EGRAKMFAKARMCV 346 (355)
T ss_pred HHHHHHHHHHHHHH
Confidence 1 234444444443
No 90
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=97.30 E-value=0.014 Score=54.86 Aligned_cols=90 Identities=19% Similarity=0.187 Sum_probs=62.9
Q ss_pred cCCeEEEeecchh-hhhcCCCcceEe--ec--cCc-chhhhhHhcCCcEEeccCcCCHHHHHHHHHHHhCceEEecCCCC
Q 022321 161 KDRGLIVSWCNQE-QVLLHPSVGAFL--TH--CGW-NSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVK 234 (299)
Q Consensus 161 ~~n~~v~~~~pq~-~iL~~~~v~~fI--tH--gG~-~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~ 234 (299)
..++.+.+++++. .+++++++ || ++ .|. +.++||+++|+|+|+.+...+. +.+..|.|+.+. -+
T Consensus 279 ~~~V~~~G~v~~~~~~~~~adv--~v~Ps~~~eG~~~~~lEAma~G~PVV~t~~~~~~------i~~~~~~g~lv~--~~ 348 (397)
T TIGR03087 279 LPGVTVTGSVADVRPYLAHAAV--AVAPLRIARGIQNKVLEAMAMAKPVVASPEAAEG------IDALPGAELLVA--AD 348 (397)
T ss_pred CCCeEEeeecCCHHHHHHhCCE--EEecccccCCcccHHHHHHHcCCCEEecCccccc------ccccCCcceEeC--CC
Confidence 3578888999864 48888998 55 43 354 4699999999999998864321 112346677664 48
Q ss_pred HHHHHHHHHHHhcCCh-hHHHHHHHHH
Q 022321 235 RGDIEALVKEMMEGDE-GKKMRQKAWE 260 (299)
Q Consensus 235 ~~~l~~av~~ll~~~~-~~~~r~~a~~ 260 (299)
.+++.++|.++++|++ ...+.+++++
T Consensus 349 ~~~la~ai~~ll~~~~~~~~~~~~ar~ 375 (397)
T TIGR03087 349 PADFAAAILALLANPAEREELGQAARR 375 (397)
T ss_pred HHHHHHHHHHHHcCHHHHHHHHHHHHH
Confidence 9999999999998863 1234444443
No 91
>COG5017 Uncharacterized conserved protein [Function unknown]
Probab=97.27 E-value=0.003 Score=49.85 Aligned_cols=108 Identities=11% Similarity=0.088 Sum_probs=65.0
Q ss_pred EEEeecCCcccCHHHHH--HHHHHHHcCCCCEEEEEcCCCCCCCCcCCChhhhhhhcCCeEEEee--cch-hhhhcCCCc
Q 022321 107 VYVNYGSVTVMSEQHLT--EFAWGLANSKRPFLWILRPDVVMGDSVVLPDEYFEEIKDRGLIVSW--CNQ-EQVLLHPSV 181 (299)
Q Consensus 107 VyvsfGS~~~~~~~~~~--~l~~al~~~~~~~iw~~~~~~~~~~~~~l~~~~~~~~~~n~~v~~~--~pq-~~iL~~~~v 181 (299)
|||+-||....-...+. ++..-.+....++|.-++... ..| +.+ ..+.+| .+- +.+...+++
T Consensus 2 ifVTvGstf~~f~rlv~k~e~~el~~~i~e~lIvQyGn~d------~kp------vag-l~v~~F~~~~kiQsli~darI 68 (161)
T COG5017 2 IFVTVGSTFYPFNRLVLKIEVLELTELIQEELIVQYGNGD------IKP------VAG-LRVYGFDKEEKIQSLIHDARI 68 (161)
T ss_pred eEEEecCccchHHHHHhhHHHHHHHHHhhhheeeeecCCC------ccc------ccc-cEEEeechHHHHHHHhhcceE
Confidence 68888887221111111 111211223447788887431 111 112 245544 343 457777777
Q ss_pred ceEeeccCcchhhhhHhcCCcEEeccCcC--------CHHHHHHHHHHHhCceEEec
Q 022321 182 GAFLTHCGWNSTMESICGGVPVICWPFFA--------EQQTNCRYACTTWGIGMEVN 230 (299)
Q Consensus 182 ~~fItHgG~~s~~Eal~~GvP~i~~P~~~--------DQ~~na~~v~~~~g~G~~l~ 230 (299)
+|+|||.||++.++..++|.|++|-.. .|-.-|..+ .+.+.=....
T Consensus 69 --VISHaG~GSIL~~~rl~kplIv~pr~s~y~elvDdHQvela~kl-ae~~~vv~~s 122 (161)
T COG5017 69 --VISHAGEGSILLLLRLDKPLIVVPRSSQYQELVDDHQVELALKL-AEINYVVACS 122 (161)
T ss_pred --EEeccCcchHHHHhhcCCcEEEEECchhHHHhhhhHHHHHHHHH-HhcCceEEEc
Confidence 999999999999999999999999633 455667777 5666555554
No 92
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=97.23 E-value=0.015 Score=54.55 Aligned_cols=82 Identities=20% Similarity=0.135 Sum_probs=59.7
Q ss_pred CCeEEEeecchhh---hhcCCCcceEeec-cC-cchhhhhHhcCCcEEeccCcCCHHHHHHHHHHHhCceEEecCCCCHH
Q 022321 162 DRGLIVSWCNQEQ---VLLHPSVGAFLTH-CG-WNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVKRG 236 (299)
Q Consensus 162 ~n~~v~~~~pq~~---iL~~~~v~~fItH-gG-~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~ 236 (299)
+++.+.+++|+.+ +|+.+++-++.+. .| .++++||+++|+|+|+... ......+ ..-..|..+. .-+.+
T Consensus 281 ~~V~f~G~v~~~~~~~~l~~adv~v~~s~~e~~~~~llEAmA~G~PVIas~~----~g~~e~i-~~~~~G~lv~-~~d~~ 354 (396)
T cd03818 281 SRVHFLGRVPYDQYLALLQVSDVHVYLTYPFVLSWSLLEAMACGCLVVGSDT----APVREVI-TDGENGLLVD-FFDPD 354 (396)
T ss_pred ceEEEeCCCCHHHHHHHHHhCcEEEEcCcccccchHHHHHHHCCCCEEEcCC----CCchhhc-ccCCceEEcC-CCCHH
Confidence 5788899998764 6788888333333 22 2489999999999998654 3344555 4445677665 35799
Q ss_pred HHHHHHHHHhcCC
Q 022321 237 DIEALVKEMMEGD 249 (299)
Q Consensus 237 ~l~~av~~ll~~~ 249 (299)
++.++|.++++|+
T Consensus 355 ~la~~i~~ll~~~ 367 (396)
T cd03818 355 ALAAAVIELLDDP 367 (396)
T ss_pred HHHHHHHHHHhCH
Confidence 9999999999886
No 93
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=97.21 E-value=0.0073 Score=56.20 Aligned_cols=91 Identities=11% Similarity=0.116 Sum_probs=64.0
Q ss_pred cCCeEEEeecchh---hhhcCCCcceEeec---cC-cchhhhhHhcCCcEEeccCcCCHHHHHHHHHHHhCceEEecCCC
Q 022321 161 KDRGLIVSWCNQE---QVLLHPSVGAFLTH---CG-WNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDV 233 (299)
Q Consensus 161 ~~n~~v~~~~pq~---~iL~~~~v~~fItH---gG-~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~ 233 (299)
.+++.+.+++|+. .++..+++ ++.. -| -.+++||+++|+|+|+.-..+ ....+ ...+.|..+. .
T Consensus 279 ~~~V~f~g~~~~~~~~~~l~~ad~--~l~~s~~E~~g~~~lEAma~G~PvI~s~~~~----~~e~i-~~~~~g~~~~--~ 349 (392)
T cd03805 279 EDQVIFLPSISDSQKELLLSSARA--LLYTPSNEHFGIVPLEAMYAGKPVIACNSGG----PLETV-VDGETGFLCE--P 349 (392)
T ss_pred CceEEEeCCCChHHHHHHHhhCeE--EEECCCcCCCCchHHHHHHcCCCEEEECCCC----cHHHh-ccCCceEEeC--C
Confidence 4688899999876 47888888 6532 12 357899999999999975433 33345 4546777765 3
Q ss_pred CHHHHHHHHHHHhcCCh-hHHHHHHHHH
Q 022321 234 KRGDIEALVKEMMEGDE-GKKMRQKAWE 260 (299)
Q Consensus 234 ~~~~l~~av~~ll~~~~-~~~~r~~a~~ 260 (299)
+.+++.++|.+++++++ ..++.+++++
T Consensus 350 ~~~~~a~~i~~l~~~~~~~~~~~~~a~~ 377 (392)
T cd03805 350 TPEEFAEAMLKLANDPDLADRMGAAGRK 377 (392)
T ss_pred CHHHHHHHHHHHHhChHHHHHHHHHHHH
Confidence 88999999999998873 2345455444
No 94
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=97.20 E-value=0.012 Score=52.51 Aligned_cols=136 Identities=12% Similarity=0.056 Sum_probs=77.0
Q ss_pred CCceEEEeecCCcc-cCHHHHHHHHHHHHcC--CCCEEEEEcCCCCCCCCcCCChhhhhh--hcCCeEEEeecchh-hhh
Q 022321 103 ANSVVYVNYGSVTV-MSEQHLTEFAWGLANS--KRPFLWILRPDVVMGDSVVLPDEYFEE--IKDRGLIVSWCNQE-QVL 176 (299)
Q Consensus 103 ~~~vVyvsfGS~~~-~~~~~~~~l~~al~~~--~~~~iw~~~~~~~~~~~~~l~~~~~~~--~~~n~~v~~~~pq~-~iL 176 (299)
++..+++..|+... ...+.+.+.+..+... +.+++++-.... ...+ .....+ ..+++.+.++.+.. .++
T Consensus 187 ~~~~~i~~~g~~~~~k~~~~~i~~~~~l~~~~~~~~l~i~G~~~~----~~~~-~~~~~~~~~~~~v~~~g~~~~~~~~~ 261 (353)
T cd03811 187 PDGPVILAVGRLSPQKGFDTLIRAFALLRKEGPDARLVILGDGPL----REEL-EALAKELGLADRVHFLGFQSNPYPYL 261 (353)
T ss_pred CCceEEEEEecchhhcChHHHHHHHHHhhhcCCCceEEEEcCCcc----HHHH-HHHHHhcCCCccEEEecccCCHHHHH
Confidence 34567777888742 2233333444444432 455554432110 0000 111122 24677888887654 588
Q ss_pred cCCCcceEeec--cCcchhhhhHhcCCcEEeccCcCCHHHHHHHHHHHhCceEEecCCCCHHHH---HHHHHHHhcCC
Q 022321 177 LHPSVGAFLTH--CGWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVKRGDI---EALVKEMMEGD 249 (299)
Q Consensus 177 ~~~~v~~fItH--gG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~l---~~av~~ll~~~ 249 (299)
..+++-++-++ |.-++++||+++|+|+|+.... .....+ +..+.|..+. .-+.+.+ .+++..+++++
T Consensus 262 ~~~d~~i~ps~~e~~~~~~~Ea~~~G~PvI~~~~~----~~~e~i-~~~~~g~~~~-~~~~~~~~~~~~~i~~~~~~~ 333 (353)
T cd03811 262 KAADLFVLSSRYEGFPNVLLEAMALGTPVVATDCP----GPREIL-EDGENGLLVP-VGDEAALAAAALALLDLLLDP 333 (353)
T ss_pred HhCCEEEeCcccCCCCcHHHHHHHhCCCEEEcCCC----ChHHHh-cCCCceEEEC-CCCHHHHHHHHHHHHhccCCh
Confidence 88888333232 3357899999999999986553 445556 6667888776 4566676 45555555554
No 95
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=97.17 E-value=0.0018 Score=60.16 Aligned_cols=184 Identities=15% Similarity=0.118 Sum_probs=98.5
Q ss_pred cCccEEEEcCcccccHHHHHHHHhcC---CCEEEeCcccCCcccccccccccCCCCCcccchhh--hHhhccCCCCceEE
Q 022321 34 FRSSAIIFNTFDEFEHAALEVIASKF---PNIYTVGPLPLLCKQVDETKFRSFGSSLWKEDTDC--LKWLDKRDANSVVY 108 (299)
Q Consensus 34 ~~~~~~l~ns~~~LE~~~~~~~r~~~---p~v~~VGpl~~~~~~~~~~~~~~l~~~~~~~~~~~--~~wl~~~~~~~vVy 108 (299)
+-|++.++.| ..+.+.+.... .+++.||......-... .+. ..... ...+.. .+++.++
T Consensus 121 ~la~lhf~~t-----~~~~~~L~~~G~~~~rI~~vG~~~~D~l~~~----~~~------~~~~~~~~~i~~~-~~~~~iL 184 (346)
T PF02350_consen 121 KLAHLHFAPT-----EEARERLLQEGEPPERIFVVGNPGIDALLQN----KEE------IEEKYKNSGILQD-APKPYIL 184 (346)
T ss_dssp HH-SEEEESS-----HHHHHHHHHTT--GGGEEE---HHHHHHHHH----HHT------TCC-HHHHHHHHC-TTSEEEE
T ss_pred hhhhhhccCC-----HHHHHHHHhcCCCCCeEEEEChHHHHHHHHh----HHH------HhhhhhhHHHHhc-cCCCEEE
Confidence 3468888888 44444444432 38999997543211000 000 00011 122222 4678999
Q ss_pred EeecCCcccC----HHHHHHHHHHHHcC-CCCEEEEEcCCCCCCCCcCCChhhhhhhcCCeEEEeecch---hhhhcCCC
Q 022321 109 VNYGSVTVMS----EQHLTEFAWGLANS-KRPFLWILRPDVVMGDSVVLPDEYFEEIKDRGLIVSWCNQ---EQVLLHPS 180 (299)
Q Consensus 109 vsfGS~~~~~----~~~~~~l~~al~~~-~~~~iw~~~~~~~~~~~~~l~~~~~~~~~~n~~v~~~~pq---~~iL~~~~ 180 (299)
|++=...... ...+..++++|.+. ++++||.+..... ....+ .....+. +|+.+.+-+++ ..+|.+++
T Consensus 185 vt~H~~t~~~~~~~~~~i~~~l~~L~~~~~~~vi~~~hn~p~--~~~~i-~~~l~~~-~~v~~~~~l~~~~~l~ll~~a~ 260 (346)
T PF02350_consen 185 VTLHPVTNEDNPERLEQILEALKALAERQNVPVIFPLHNNPR--GSDII-IEKLKKY-DNVRLIEPLGYEEYLSLLKNAD 260 (346)
T ss_dssp EE-S-CCCCTHH--HHHHHHHHHHHHHHTTEEEEEE--S-HH--HHHHH-HHHHTT--TTEEEE----HHHHHHHHHHES
T ss_pred EEeCcchhcCChHHHHHHHHHHHHHHhcCCCcEEEEecCCch--HHHHH-HHHhccc-CCEEEECCCCHHHHHHHHhcce
Confidence 9985544333 34566677777665 7889998873210 00001 1112233 48888765554 55888999
Q ss_pred cceEeeccCcchhh-hhHhcCCcEEeccCcCCHHHHHHHHHHHhCceEEecCCCCHHHHHHHHHHHhcC
Q 022321 181 VGAFLTHCGWNSTM-ESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVKRGDIEALVKEMMEG 248 (299)
Q Consensus 181 v~~fItHgG~~s~~-Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~l~~av~~ll~~ 248 (299)
+ +||..| +++ ||.+.|+|.|.+=..++.+.- ...|..+.+. .+.++|.+++++++.+
T Consensus 261 ~--vvgdSs--GI~eEa~~lg~P~v~iR~~geRqe~-----r~~~~nvlv~--~~~~~I~~ai~~~l~~ 318 (346)
T PF02350_consen 261 L--VVGDSS--GIQEEAPSLGKPVVNIRDSGERQEG-----RERGSNVLVG--TDPEAIIQAIEKALSD 318 (346)
T ss_dssp E--EEESSH--HHHHHGGGGT--EEECSSS-S-HHH-----HHTTSEEEET--SSHHHHHHHHHHHHH-
T ss_pred E--EEEcCc--cHHHHHHHhCCeEEEecCCCCCHHH-----HhhcceEEeC--CCHHHHHHHHHHHHhC
Confidence 9 999999 677 999999999999332332222 2346666643 7999999999999976
No 96
>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process
Probab=97.13 E-value=0.019 Score=53.78 Aligned_cols=206 Identities=19% Similarity=0.141 Sum_probs=109.7
Q ss_pred cccccHHHHHHHHhcCCCEEEeC-cccCCcccccccccccCCCCCcccchhhhHhhccCCCCceEEEeecCCcccCHHHH
Q 022321 44 FDEFEHAALEVIASKFPNIYTVG-PLPLLCKQVDETKFRSFGSSLWKEDTDCLKWLDKRDANSVVYVNYGSVTVMSEQHL 122 (299)
Q Consensus 44 ~~~LE~~~~~~~r~~~p~v~~VG-pl~~~~~~~~~~~~~~l~~~~~~~~~~~~~wl~~~~~~~vVyvsfGS~~~~~~~~~ 122 (299)
..-+|.+++ +...-++.||| |+...-.... .+....+.+ -.+++++|.+--||-..--...+
T Consensus 140 ifPFE~~~y---~~~g~~~~~VGHPl~d~~~~~~-------------~~~~~~~~~-l~~~~~iIaLLPGSR~~EI~rll 202 (373)
T PF02684_consen 140 IFPFEPEFY---KKHGVPVTYVGHPLLDEVKPEP-------------DRAEAREKL-LDPDKPIIALLPGSRKSEIKRLL 202 (373)
T ss_pred CCcccHHHH---hccCCCeEEECCcchhhhccCC-------------CHHHHHHhc-CCCCCcEEEEeCCCCHHHHHHHH
Confidence 455777754 45555799999 6654322100 111122222 23367899999999742212223
Q ss_pred HHHHHHH---Hc--CCCCEEEEEcCCCCCCCCcCCChhhhhhhcCCeEEEee-cchhhhhcCCCcceEeeccCcchhhhh
Q 022321 123 TEFAWGL---AN--SKRPFLWILRPDVVMGDSVVLPDEYFEEIKDRGLIVSW-CNQEQVLLHPSVGAFLTHCGWNSTMES 196 (299)
Q Consensus 123 ~~l~~al---~~--~~~~~iw~~~~~~~~~~~~~l~~~~~~~~~~n~~v~~~-~pq~~iL~~~~v~~fItHgG~~s~~Ea 196 (299)
-.++++. .+ .+.+|++...+... ...-.......+.++.+.-. -.-.+++..+++ .+.-.|. .++|+
T Consensus 203 P~~l~aa~~l~~~~p~l~fvvp~a~~~~----~~~i~~~~~~~~~~~~~~~~~~~~~~~m~~ad~--al~~SGT-aTLE~ 275 (373)
T PF02684_consen 203 PIFLEAAKLLKKQRPDLQFVVPVAPEVH----EELIEEILAEYPPDVSIVIIEGESYDAMAAADA--ALAASGT-ATLEA 275 (373)
T ss_pred HHHHHHHHHHHHhCCCeEEEEecCCHHH----HHHHHHHHHhhCCCCeEEEcCCchHHHHHhCcc--hhhcCCH-HHHHH
Confidence 3334443 32 35666665443210 00000111122233333222 234568888887 6665554 67899
Q ss_pred HhcCCcEEeccCcC-CHHHHHHHHHHHhCc-eE-------Eec-----CCCCHHHHHHHHHHHhcCChhHHHHHHHHHHH
Q 022321 197 ICGGVPVICWPFFA-EQQTNCRYACTTWGI-GM-------EVN-----HDVKRGDIEALVKEMMEGDEGKKMRQKAWEWK 262 (299)
Q Consensus 197 l~~GvP~i~~P~~~-DQ~~na~~v~~~~g~-G~-------~l~-----~~~~~~~l~~av~~ll~~~~~~~~r~~a~~l~ 262 (299)
...|+|||++=-.. =-+.-|+++ ..... |+ .+- .+.|++.|.+++.++++|+ ..++..+...
T Consensus 276 Al~g~P~Vv~Yk~~~lt~~iak~l-vk~~~isL~Niia~~~v~PEliQ~~~~~~~i~~~~~~ll~~~---~~~~~~~~~~ 351 (373)
T PF02684_consen 276 ALLGVPMVVAYKVSPLTYFIAKRL-VKVKYISLPNIIAGREVVPELIQEDATPENIAAELLELLENP---EKRKKQKELF 351 (373)
T ss_pred HHhCCCEEEEEcCcHHHHHHHHHh-hcCCEeechhhhcCCCcchhhhcccCCHHHHHHHHHHHhcCH---HHHHHHHHHH
Confidence 99999998864332 234456665 33222 11 111 1589999999999999987 3344444455
Q ss_pred HHHHHHHhcCCchHH
Q 022321 263 KKAEAATAVGGQSYN 277 (299)
Q Consensus 263 ~~~~~a~~~gg~s~~ 277 (299)
+.+++....|.++..
T Consensus 352 ~~~~~~~~~~~~~~~ 366 (373)
T PF02684_consen 352 REIRQLLGPGASSRA 366 (373)
T ss_pred HHHHHhhhhccCCHH
Confidence 555555555665554
No 97
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=97.02 E-value=0.031 Score=52.53 Aligned_cols=131 Identities=14% Similarity=0.113 Sum_probs=75.5
Q ss_pred CceEEEeecCCcc-cCHHHHHHHHHHHHc--CCCCEEEEEcCCCCCCCCcCCChhhhhh--hcCCeEEEeecchhh---h
Q 022321 104 NSVVYVNYGSVTV-MSEQHLTEFAWGLAN--SKRPFLWILRPDVVMGDSVVLPDEYFEE--IKDRGLIVSWCNQEQ---V 175 (299)
Q Consensus 104 ~~vVyvsfGS~~~-~~~~~~~~l~~al~~--~~~~~iw~~~~~~~~~~~~~l~~~~~~~--~~~n~~v~~~~pq~~---i 175 (299)
+..+++..|.... ...+.+.+.+..+.+ .+..++++-.+.. ...+ ....++ +.+++.+.+|+|+.+ +
T Consensus 192 ~~~~i~~~grl~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~g~~----~~~l-~~~~~~~~l~~~v~~~G~~~~~~~~~~ 266 (398)
T cd03796 192 DKITIVVISRLVYRKGIDLLVGIIPEICKKHPNVRFIIGGDGPK----RILL-EEMREKYNLQDRVELLGAVPHERVRDV 266 (398)
T ss_pred CceEEEEEeccchhcCHHHHHHHHHHHHhhCCCEEEEEEeCCch----HHHH-HHHHHHhCCCCeEEEeCCCCHHHHHHH
Confidence 4566777777632 233333333344432 3445544432110 0001 111122 246688899998643 8
Q ss_pred hcCCCcceEee---ccCc-chhhhhHhcCCcEEeccCcCCHHHHHHHHHHHhCceEEecCCCCHHHHHHHHHHHhcCC
Q 022321 176 LLHPSVGAFLT---HCGW-NSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVKRGDIEALVKEMMEGD 249 (299)
Q Consensus 176 L~~~~v~~fIt---HgG~-~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~l~~av~~ll~~~ 249 (299)
++.+++ ||. +-|. .+++||+++|+|+|+.+..+- ...+ .+ |.+.... .+.+++.+++.+++++.
T Consensus 267 l~~ad~--~v~pS~~E~~g~~~~EAma~G~PVI~s~~gg~----~e~i-~~-~~~~~~~--~~~~~l~~~l~~~l~~~ 334 (398)
T cd03796 267 LVQGHI--FLNTSLTEAFCIAIVEAASCGLLVVSTRVGGI----PEVL-PP-DMILLAE--PDVESIVRKLEEAISIL 334 (398)
T ss_pred HHhCCE--EEeCChhhccCHHHHHHHHcCCCEEECCCCCc----hhhe-eC-CceeecC--CCHHHHHHHHHHHHhCh
Confidence 888888 553 2243 499999999999999877532 2333 33 4343332 37899999999999864
No 98
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=96.95 E-value=0.039 Score=51.23 Aligned_cols=90 Identities=18% Similarity=0.149 Sum_probs=58.8
Q ss_pred cCCeEEEeec--chh---hhhcCCCcceEeecc---C-cchhhhhHhcCCcEEeccCcCCHHHHHHHHHHHhCceEEecC
Q 022321 161 KDRGLIVSWC--NQE---QVLLHPSVGAFLTHC---G-WNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNH 231 (299)
Q Consensus 161 ~~n~~v~~~~--pq~---~iL~~~~v~~fItHg---G-~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~ 231 (299)
.+++.+.++. +.. .+++.+++ |+.-. | -.+++||+++|+|+|+....+ ....+ ..-..|..+.
T Consensus 251 ~~~v~~~~~~~~~~~~~~~~~~~ad~--~v~~s~~Eg~g~~~lEA~a~G~Pvv~s~~~~----~~~~i-~~~~~g~~~~- 322 (372)
T cd03792 251 DPDIHVLTLPPVSDLEVNALQRASTV--VLQKSIREGFGLTVTEALWKGKPVIAGPVGG----IPLQI-EDGETGFLVD- 322 (372)
T ss_pred CCCeEEEecCCCCHHHHHHHHHhCeE--EEeCCCccCCCHHHHHHHHcCCCEEEcCCCC----chhhc-ccCCceEEeC-
Confidence 4567777776 332 47888888 77533 2 359999999999999976532 22334 4545677654
Q ss_pred CCCHHHHHHHHHHHhcCCh-hHHHHHHHHH
Q 022321 232 DVKRGDIEALVKEMMEGDE-GKKMRQKAWE 260 (299)
Q Consensus 232 ~~~~~~l~~av~~ll~~~~-~~~~r~~a~~ 260 (299)
+.+.+..+|.+++++++ .+++.+++++
T Consensus 323 --~~~~~a~~i~~ll~~~~~~~~~~~~a~~ 350 (372)
T cd03792 323 --TVEEAAVRILYLLRDPELRRKMGANARE 350 (372)
T ss_pred --CcHHHHHHHHHHHcCHHHHHHHHHHHHH
Confidence 46678889999998762 1344444444
No 99
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=96.93 E-value=0.026 Score=51.50 Aligned_cols=136 Identities=13% Similarity=0.057 Sum_probs=78.2
Q ss_pred CceEEEeecCCc-ccCHHHHHHHHHHHHcC--CCCEEEEEcCCCCCCCCcCCChhhh-hhhcCCeEEEeecch-hhhhcC
Q 022321 104 NSVVYVNYGSVT-VMSEQHLTEFAWGLANS--KRPFLWILRPDVVMGDSVVLPDEYF-EEIKDRGLIVSWCNQ-EQVLLH 178 (299)
Q Consensus 104 ~~vVyvsfGS~~-~~~~~~~~~l~~al~~~--~~~~iw~~~~~~~~~~~~~l~~~~~-~~~~~n~~v~~~~pq-~~iL~~ 178 (299)
+..+.+..|+.. ....+.+.+.+..+.+. +.+++++ +.... ...+-.... ....+++.+.++..+ ..++..
T Consensus 191 ~~~~i~~vGr~~~~Kg~~~li~a~~~l~~~~~~~~l~iv-G~g~~---~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~ 266 (358)
T cd03812 191 DKFVIGHVGRFSEQKNHEFLIEIFAELLKKNPNAKLLLV-GDGEL---EEEIKKKVKELGLEDKVIFLGVRNDVPELLQA 266 (358)
T ss_pred CCEEEEEEeccccccChHHHHHHHHHHHHhCCCeEEEEE-eCCch---HHHHHHHHHhcCCCCcEEEecccCCHHHHHHh
Confidence 345666677763 23334444445555433 4454443 32110 000100010 123467888887544 458888
Q ss_pred CCcceEeec--cCcchhhhhHhcCCcEEeccCcCCHHHHHHHHHHHhCceEEecCCCCHHHHHHHHHHHhcCCh
Q 022321 179 PSVGAFLTH--CGWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVKRGDIEALVKEMMEGDE 250 (299)
Q Consensus 179 ~~v~~fItH--gG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~l~~av~~ll~~~~ 250 (299)
+++-.+-+. |--++++||+++|+|+|+....+ ....+ .. +.|.... .-+.+++.++|.++++|++
T Consensus 267 adi~v~ps~~E~~~~~~lEAma~G~PvI~s~~~~----~~~~i-~~-~~~~~~~-~~~~~~~a~~i~~l~~~~~ 333 (358)
T cd03812 267 MDVFLFPSLYEGLPLVLIEAQASGLPCILSDTIT----KEVDL-TD-LVKFLSL-DESPEIWAEEILKLKSEDR 333 (358)
T ss_pred cCEEEecccccCCCHHHHHHHHhCCCEEEEcCCc----hhhhh-cc-CccEEeC-CCCHHHHHHHHHHHHhCcc
Confidence 888332222 44679999999999999876644 23334 44 5555544 3467999999999999883
No 100
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=96.88 E-value=0.03 Score=51.07 Aligned_cols=124 Identities=15% Similarity=0.164 Sum_probs=69.8
Q ss_pred EEeecCCcccCHHHHHHHHHHHHcC--CCCEEEEEcCCCCCCCCcCCChhhh--hhhcCCeEEEeecchhh---hhcCCC
Q 022321 108 YVNYGSVTVMSEQHLTEFAWGLANS--KRPFLWILRPDVVMGDSVVLPDEYF--EEIKDRGLIVSWCNQEQ---VLLHPS 180 (299)
Q Consensus 108 yvsfGS~~~~~~~~~~~l~~al~~~--~~~~iw~~~~~~~~~~~~~l~~~~~--~~~~~n~~v~~~~pq~~---iL~~~~ 180 (299)
++.+|+... .+.+..+++++... +.+++++ +.... ...+...+. ....+++.+.+++|+.+ .+..++
T Consensus 196 i~~~G~~~~--~Kg~~~li~a~~~l~~~~~l~iv-G~~~~---~~~~~~~~~~~~~~~~~V~~~g~~~~~~~~~~~~~ad 269 (363)
T cd04955 196 YLLVGRIVP--ENNIDDLIEAFSKSNSGKKLVIV-GNADH---NTPYGKLLKEKAAADPRIIFVGPIYDQELLELLRYAA 269 (363)
T ss_pred EEEEecccc--cCCHHHHHHHHHhhccCceEEEE-cCCCC---cchHHHHHHHHhCCCCcEEEccccChHHHHHHHHhCC
Confidence 345777642 23344556666554 3555443 32210 001111111 12357888999998864 666677
Q ss_pred cceEeeccCc-----chhhhhHhcCCcEEeccCcCCHHHHHHHHHHHhCceEEecCCCCHHHHHHHHHHHhcCC
Q 022321 181 VGAFLTHCGW-----NSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVKRGDIEALVKEMMEGD 249 (299)
Q Consensus 181 v~~fItHgG~-----~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~l~~av~~ll~~~ 249 (299)
+ ++.+.-. ++++||+++|+|+|+..... +...+ +. .|..+.. .+.+.+++.++++++
T Consensus 270 ~--~v~ps~~~e~~~~~~~EAma~G~PvI~s~~~~----~~e~~-~~--~g~~~~~---~~~l~~~i~~l~~~~ 331 (363)
T cd04955 270 L--FYLHGHSVGGTNPSLLEAMAYGCPVLASDNPF----NREVL-GD--KAIYFKV---GDDLASLLEELEADP 331 (363)
T ss_pred E--EEeCCccCCCCChHHHHHHHcCCCEEEecCCc----cceee-cC--CeeEecC---chHHHHHHHHHHhCH
Confidence 7 5544322 57999999999999976532 22222 22 3333331 122999999999875
No 101
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=96.86 E-value=0.0068 Score=56.70 Aligned_cols=210 Identities=13% Similarity=0.110 Sum_probs=118.1
Q ss_pred cCccEEEEcCcccccHHHHHHHHhcC-CCEEEeCcccCCcccccccccccCCCCCcccchhhhHhhccCCCCceEEEeec
Q 022321 34 FRSSAIIFNTFDEFEHAALEVIASKF-PNIYTVGPLPLLCKQVDETKFRSFGSSLWKEDTDCLKWLDKRDANSVVYVNYG 112 (299)
Q Consensus 34 ~~~~~~l~ns~~~LE~~~~~~~r~~~-p~v~~VGpl~~~~~~~~~~~~~~l~~~~~~~~~~~~~wl~~~~~~~vVyvsfG 112 (299)
.+.++++..|-.+- +-++... ++|.-.|-+-...... + .....-+.+...++.. ++ +.|.-+
T Consensus 176 ~~i~li~aQse~D~-----~Rf~~LGa~~v~v~GNlKfd~~~~--------~-~~~~~~~~~r~~l~~~--r~-v~iaaS 238 (419)
T COG1519 176 KNIDLILAQSEEDA-----QRFRSLGAKPVVVTGNLKFDIEPP--------P-QLAAELAALRRQLGGH--RP-VWVAAS 238 (419)
T ss_pred HhcceeeecCHHHH-----HHHHhcCCcceEEecceeecCCCC--------h-hhHHHHHHHHHhcCCC--Cc-eEEEec
Confidence 45677888773222 2223333 4577777765432211 0 0000112233334332 33 455555
Q ss_pred CCcccCHHHHHHHHHHHHcC--CCCEEEEEcCCCCC-C-----CCcCCChhhhhh-----hcCCeEEEeecchh-hhhcC
Q 022321 113 SVTVMSEQHLTEFAWGLANS--KRPFLWILRPDVVM-G-----DSVVLPDEYFEE-----IKDRGLIVSWCNQE-QVLLH 178 (299)
Q Consensus 113 S~~~~~~~~~~~l~~al~~~--~~~~iw~~~~~~~~-~-----~~~~l~~~~~~~-----~~~n~~v~~~~pq~-~iL~~ 178 (299)
| -.-..+.+.+...+|.+. +..+||+=+..... . ....+.-...++ ...++.+.+-+--+ .+++-
T Consensus 239 T-H~GEeei~l~~~~~l~~~~~~~llIlVPRHpERf~~v~~l~~~~gl~~~~rS~~~~~~~~tdV~l~DtmGEL~l~y~~ 317 (419)
T COG1519 239 T-HEGEEEIILDAHQALKKQFPNLLLILVPRHPERFKAVENLLKRKGLSVTRRSQGDPPFSDTDVLLGDTMGELGLLYGI 317 (419)
T ss_pred C-CCchHHHHHHHHHHHHhhCCCceEEEecCChhhHHHHHHHHHHcCCeEEeecCCCCCCCCCcEEEEecHhHHHHHHhh
Confidence 5 333445566677777653 46677775532100 0 000000000000 01245555555433 34444
Q ss_pred CCc----ceEeeccCcchhhhhHhcCCcEEeccCcCCHHHHHHHHHHHhCceEEecCCCCHHHHHHHHHHHhcCChh-HH
Q 022321 179 PSV----GAFLTHCGWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVKRGDIEALVKEMMEGDEG-KK 253 (299)
Q Consensus 179 ~~v----~~fItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~l~~av~~ll~~~~~-~~ 253 (299)
+++ |-|+-+||+| .+|++++|+|+|.=|+..-|..-++++ ...|.|+.++ +.+.+.+++..+++|+.. ..
T Consensus 318 adiAFVGGSlv~~GGHN-~LEpa~~~~pvi~Gp~~~Nf~ei~~~l-~~~ga~~~v~---~~~~l~~~v~~l~~~~~~r~~ 392 (419)
T COG1519 318 ADIAFVGGSLVPIGGHN-PLEPAAFGTPVIFGPYTFNFSDIAERL-LQAGAGLQVE---DADLLAKAVELLLADEDKREA 392 (419)
T ss_pred ccEEEECCcccCCCCCC-hhhHHHcCCCEEeCCccccHHHHHHHH-HhcCCeEEEC---CHHHHHHHHHHhcCCHHHHHH
Confidence 443 1256799998 789999999999999999999999999 8999999998 488899999888887532 34
Q ss_pred HHHHHHHHHHHHH
Q 022321 254 MRQKAWEWKKKAE 266 (299)
Q Consensus 254 ~r~~a~~l~~~~~ 266 (299)
|.+++.++-+..+
T Consensus 393 ~~~~~~~~v~~~~ 405 (419)
T COG1519 393 YGRAGLEFLAQNR 405 (419)
T ss_pred HHHHHHHHHHHhh
Confidence 5555555554443
No 102
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=96.81 E-value=0.063 Score=51.95 Aligned_cols=81 Identities=14% Similarity=0.171 Sum_probs=58.2
Q ss_pred cCCeEEEeecchhhhhcCCCcceEeec----cCcchhhhhHhcCCcEEeccCcCCHHHHHHHHHHHh-----C-ceEEec
Q 022321 161 KDRGLIVSWCNQEQVLLHPSVGAFLTH----CGWNSTMESICGGVPVICWPFFAEQQTNCRYACTTW-----G-IGMEVN 230 (299)
Q Consensus 161 ~~n~~v~~~~pq~~iL~~~~v~~fItH----gG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~-----g-~G~~l~ 230 (299)
.+++.+.+...-..+++.+++ ||.- |--++++||+++|+|+|+... ......+ +.. | .|..+.
T Consensus 353 ~~~V~f~G~~~v~~~l~~aDv--~vlpS~~Eg~p~~vlEAma~G~PVVatd~----g~~~elv-~~~~~~~~g~~G~lv~ 425 (475)
T cd03813 353 EDNVKFTGFQNVKEYLPKLDV--LVLTSISEGQPLVILEAMAAGIPVVATDV----GSCRELI-EGADDEALGPAGEVVP 425 (475)
T ss_pred CCeEEEcCCccHHHHHHhCCE--EEeCchhhcCChHHHHHHHcCCCEEECCC----CChHHHh-cCCcccccCCceEEEC
Confidence 467888885555678888888 5533 334789999999999999543 3334444 442 2 677665
Q ss_pred CCCCHHHHHHHHHHHhcCC
Q 022321 231 HDVKRGDIEALVKEMMEGD 249 (299)
Q Consensus 231 ~~~~~~~l~~av~~ll~~~ 249 (299)
.-+.+++.++|.++++|+
T Consensus 426 -~~d~~~la~ai~~ll~~~ 443 (475)
T cd03813 426 -PADPEALARAILRLLKDP 443 (475)
T ss_pred -CCCHHHHHHHHHHHhcCH
Confidence 468999999999999886
No 103
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=96.72 E-value=0.028 Score=50.74 Aligned_cols=129 Identities=13% Similarity=-0.013 Sum_probs=79.3
Q ss_pred eEEEeecCCcccCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCcCCChhhhhh--hcCCeEEEeecchh---hhhcCCC
Q 022321 106 VVYVNYGSVTVMSEQHLTEFAWGLANSKRPFLWILRPDVVMGDSVVLPDEYFEE--IKDRGLIVSWCNQE---QVLLHPS 180 (299)
Q Consensus 106 vVyvsfGS~~~~~~~~~~~l~~al~~~~~~~iw~~~~~~~~~~~~~l~~~~~~~--~~~n~~v~~~~pq~---~iL~~~~ 180 (299)
.+.+..|... ..+....++++++..+.++++.-.... ...+....... ..+++.+.+++++. .+++.++
T Consensus 172 ~~i~~~Gr~~--~~Kg~~~li~~~~~~~~~l~i~G~~~~----~~~~~~~~~~~~~~~~~v~~~G~~~~~~~~~~~~~~d 245 (335)
T cd03802 172 DYLLFLGRIS--PEKGPHLAIRAARRAGIPLKLAGPVSD----PDYFYREIAPELLDGPDIEYLGEVGGAEKAELLGNAR 245 (335)
T ss_pred CEEEEEEeec--cccCHHHHHHHHHhcCCeEEEEeCCCC----HHHHHHHHHHhcccCCcEEEeCCCCHHHHHHHHHhCc
Confidence 3445567662 223345577777778877766543221 00000111111 25788899999875 4688888
Q ss_pred cceEeec--cCc-chhhhhHhcCCcEEeccCcCCHHHHHHHHHHHhCceEEecCCCCHHHHHHHHHHHhcC
Q 022321 181 VGAFLTH--CGW-NSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVKRGDIEALVKEMMEG 248 (299)
Q Consensus 181 v~~fItH--gG~-~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~l~~av~~ll~~ 248 (299)
+-++-+. -|. .+++||+++|+|+|+....+ +...+ +.-..|..+.. .+++.+++.+++..
T Consensus 246 ~~v~ps~~~E~~~~~~lEAma~G~PvI~~~~~~----~~e~i-~~~~~g~l~~~---~~~l~~~l~~l~~~ 308 (335)
T cd03802 246 ALLFPILWEEPFGLVMIEAMACGTPVIAFRRGA----VPEVV-EDGVTGFLVDS---VEELAAAVARADRL 308 (335)
T ss_pred EEEeCCcccCCcchHHHHHHhcCCCEEEeCCCC----chhhe-eCCCcEEEeCC---HHHHHHHHHHHhcc
Confidence 8333332 343 58999999999999887632 23344 44336777762 99999999988654
No 104
>PLN02949 transferase, transferring glycosyl groups
Probab=96.65 E-value=0.061 Score=51.98 Aligned_cols=92 Identities=10% Similarity=-0.005 Sum_probs=57.9
Q ss_pred cCCeEEEeecchhh---hhcCCCcceEee---ccCc-chhhhhHhcCCcEEeccCcCCHHHHHHHHHHH-hC-ceEEecC
Q 022321 161 KDRGLIVSWCNQEQ---VLLHPSVGAFLT---HCGW-NSTMESICGGVPVICWPFFAEQQTNCRYACTT-WG-IGMEVNH 231 (299)
Q Consensus 161 ~~n~~v~~~~pq~~---iL~~~~v~~fIt---HgG~-~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~-~g-~G~~l~~ 231 (299)
.+++.+.+++|+.+ +|+.+++ +|. +=|. .++.||+++|+|+|+....+--. ..+.+. .| .|....
T Consensus 334 ~~~V~f~g~v~~~el~~ll~~a~~--~v~~s~~E~FGivvlEAMA~G~PVIa~~~gGp~~---eIV~~~~~g~tG~l~~- 407 (463)
T PLN02949 334 DGDVEFHKNVSYRDLVRLLGGAVA--GLHSMIDEHFGISVVEYMAAGAVPIAHNSAGPKM---DIVLDEDGQQTGFLAT- 407 (463)
T ss_pred CCcEEEeCCCCHHHHHHHHHhCcE--EEeCCccCCCChHHHHHHHcCCcEEEeCCCCCcc---eeeecCCCCcccccCC-
Confidence 57888889998654 7888887 652 2233 37999999999999987543100 011010 12 344332
Q ss_pred CCCHHHHHHHHHHHhcCC-h-hHHHHHHHHH
Q 022321 232 DVKRGDIEALVKEMMEGD-E-GKKMRQKAWE 260 (299)
Q Consensus 232 ~~~~~~l~~av~~ll~~~-~-~~~~r~~a~~ 260 (299)
+.+++.++|.++++++ + .+++.+++++
T Consensus 408 --~~~~la~ai~~ll~~~~~~r~~m~~~ar~ 436 (463)
T PLN02949 408 --TVEEYADAILEVLRMRETERLEIAAAARK 436 (463)
T ss_pred --CHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 8899999999999853 1 2244555544
No 105
>COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]
Probab=96.55 E-value=0.032 Score=54.05 Aligned_cols=136 Identities=18% Similarity=0.151 Sum_probs=88.7
Q ss_pred CCCceEEEeecCCcccCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCcCCChhhhhhh---cCCeEEEeecchhh---h
Q 022321 102 DANSVVYVNYGSVTVMSEQHLTEFAWGLANSKRPFLWILRPDVVMGDSVVLPDEYFEEI---KDRGLIVSWCNQEQ---V 175 (299)
Q Consensus 102 ~~~~vVyvsfGS~~~~~~~~~~~l~~al~~~~~~~iw~~~~~~~~~~~~~l~~~~~~~~---~~n~~v~~~~pq~~---i 175 (299)
+++.+||+||+......++.+..=++-|+..+-.++|..+.....+....+ .+..++. .++.++.+-.|... =
T Consensus 427 p~~avVf~c~~n~~K~~pev~~~wmqIL~~vP~Svl~L~~~~~~~~~~~~l-~~la~~~Gv~~eRL~f~p~~~~~~h~a~ 505 (620)
T COG3914 427 PEDAVVFCCFNNYFKITPEVFALWMQILSAVPNSVLLLKAGGDDAEINARL-RDLAEREGVDSERLRFLPPAPNEDHRAR 505 (620)
T ss_pred CCCeEEEEecCCcccCCHHHHHHHHHHHHhCCCcEEEEecCCCcHHHHHHH-HHHHHHcCCChhheeecCCCCCHHHHHh
Confidence 356899999999999999998888888888899999998753100000000 0111111 35556656555443 3
Q ss_pred hcCCCcceEe---eccCcchhhhhHhcCCcEEeccCcCCHHH--HHHHHHHHhCceEEecCCCCHHHHHHHHH
Q 022321 176 LLHPSVGAFL---THCGWNSTMESICGGVPVICWPFFAEQQT--NCRYACTTWGIGMEVNHDVKRGDIEALVK 243 (299)
Q Consensus 176 L~~~~v~~fI---tHgG~~s~~Eal~~GvP~i~~P~~~DQ~~--na~~v~~~~g~G~~l~~~~~~~~l~~av~ 243 (299)
++-+++ |+ --||+.|..|+++.|||+|.++ ++||. |+.-++...|+-..+- .-..+-++++|+
T Consensus 506 ~~iADl--vLDTyPY~g~TTa~daLwm~vPVlT~~--G~~FasR~~~si~~~agi~e~vA-~s~~dYV~~av~ 573 (620)
T COG3914 506 YGIADL--VLDTYPYGGHTTASDALWMGVPVLTRV--GEQFASRNGASIATNAGIPELVA-DSRADYVEKAVA 573 (620)
T ss_pred hchhhe--eeecccCCCccchHHHHHhcCceeeec--cHHHHHhhhHHHHHhcCCchhhc-CCHHHHHHHHHH
Confidence 344455 65 4799999999999999999876 57775 5555546666655443 345556666664
No 106
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=96.49 E-value=0.12 Score=52.36 Aligned_cols=93 Identities=18% Similarity=0.138 Sum_probs=63.4
Q ss_pred cCCeEEEeecchh-hhhcCCCcceEee---ccC-cchhhhhHhcCCcEEeccCcCCHHHHHHHHHHHhCceEEecC-CCC
Q 022321 161 KDRGLIVSWCNQE-QVLLHPSVGAFLT---HCG-WNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNH-DVK 234 (299)
Q Consensus 161 ~~n~~v~~~~pq~-~iL~~~~v~~fIt---HgG-~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~-~~~ 234 (299)
.+++.+.+|.+.. .+|..+++ ||. +-| -++++||+++|+|+|+.... .....+ +.-..|+.+.. +.+
T Consensus 573 ~~~V~flG~~~dv~~ll~aaDv--~VlpS~~Egfp~vlLEAMA~G~PVVat~~g----G~~EiV-~dg~~GlLv~~~d~~ 645 (694)
T PRK15179 573 GERILFTGLSRRVGYWLTQFNA--FLLLSRFEGLPNVLIEAQFSGVPVVTTLAG----GAGEAV-QEGVTGLTLPADTVT 645 (694)
T ss_pred CCcEEEcCCcchHHHHHHhcCE--EEeccccccchHHHHHHHHcCCeEEEECCC----ChHHHc-cCCCCEEEeCCCCCC
Confidence 4778888888754 48888888 654 445 47999999999999998753 244445 55457888865 566
Q ss_pred HHHHHHHHHHHhcCCh-hHHHHHHHHH
Q 022321 235 RGDIEALVKEMMEGDE-GKKMRQKAWE 260 (299)
Q Consensus 235 ~~~l~~av~~ll~~~~-~~~~r~~a~~ 260 (299)
.+++.+++.+++.+.. ...+++++++
T Consensus 646 ~~~La~aL~~ll~~l~~~~~l~~~ar~ 672 (694)
T PRK15179 646 APDVAEALARIHDMCAADPGIARKAAD 672 (694)
T ss_pred hHHHHHHHHHHHhChhccHHHHHHHHH
Confidence 7778888877765321 1245555444
No 107
>PRK10017 colanic acid biosynthesis protein; Provisional
Probab=96.26 E-value=0.22 Score=47.54 Aligned_cols=162 Identities=10% Similarity=0.176 Sum_probs=90.5
Q ss_pred HhhccCCCCceEEEeecCCccc------CH----HHHHHHHHHHHcCCCCEEEEEcCCCCCC-CCc--CCChhhhhhhc-
Q 022321 96 KWLDKRDANSVVYVNYGSVTVM------SE----QHLTEFAWGLANSKRPFLWILRPDVVMG-DSV--VLPDEYFEEIK- 161 (299)
Q Consensus 96 ~wl~~~~~~~vVyvsfGS~~~~------~~----~~~~~l~~al~~~~~~~iw~~~~~~~~~-~~~--~l~~~~~~~~~- 161 (299)
.|+.....+++|-|+.-..... .. +.+.++++.|.+.|+++++.---..... ... .....+.+.++
T Consensus 226 ~~~~~~~~~~~Vgisvr~~~~~~~~~~~~~~~Y~~~la~~i~~Li~~g~~Vv~lp~~~~~~~~~~dD~~~~~~l~~~~~~ 305 (426)
T PRK10017 226 HWLDVAAQQKTVAITLRELAPFDKRLGTTQQAYEKAFAGVVNRIIDEGYQVIALSTCTGIDSYNKDDRMVALNLRQHVSD 305 (426)
T ss_pred hhhcccccCCEEEEEecccccccccccccHHHHHHHHHHHHHHHHHCCCeEEEEecccCccCCCCchHHHHHHHHHhccc
Confidence 4554333456777776544211 11 2344555666566888887643211000 000 00112223333
Q ss_pred -CCeEE-E-eecchh--hhhcCCCcceEeeccCcchhhhhHhcCCcEEeccCcCCHHHHHHHHHHHhCceEE-ecC-CCC
Q 022321 162 -DRGLI-V-SWCNQE--QVLLHPSVGAFLTHCGWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGME-VNH-DVK 234 (299)
Q Consensus 162 -~n~~v-~-~~~pq~--~iL~~~~v~~fItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~-l~~-~~~ 234 (299)
.+..+ . ++-|.. .+++++++ +|.. =.-++.=|+..|||.+++++ | +.....+ +.+|.... ++. .++
T Consensus 306 ~~~~~vi~~~~~~~e~~~iIs~~dl--~ig~-RlHa~I~a~~~gvP~i~i~Y--~-~K~~~~~-~~lg~~~~~~~~~~l~ 378 (426)
T PRK10017 306 PARYHVVMDELNDLEMGKILGACEL--TVGT-RLHSAIISMNFGTPAIAINY--E-HKSAGIM-QQLGLPEMAIDIRHLL 378 (426)
T ss_pred ccceeEecCCCChHHHHHHHhhCCE--EEEe-cchHHHHHHHcCCCEEEeee--h-HHHHHHH-HHcCCccEEechhhCC
Confidence 23333 2 233433 68888887 8764 34466778999999999999 3 4444455 77887765 333 688
Q ss_pred HHHHHHHHHHHhcCChh--HHHHHHHHHHHHH
Q 022321 235 RGDIEALVKEMMEGDEG--KKMRQKAWEWKKK 264 (299)
Q Consensus 235 ~~~l~~av~~ll~~~~~--~~~r~~a~~l~~~ 264 (299)
.+++.+.+.++++|.+. +.+++++.++++.
T Consensus 379 ~~~Li~~v~~~~~~r~~~~~~l~~~v~~~r~~ 410 (426)
T PRK10017 379 DGSLQAMVADTLGQLPALNARLAEAVSRERQT 410 (426)
T ss_pred HHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHH
Confidence 89999999999987531 2334444444443
No 108
>PHA01633 putative glycosyl transferase group 1
Probab=96.21 E-value=0.21 Score=46.17 Aligned_cols=86 Identities=15% Similarity=0.101 Sum_probs=56.9
Q ss_pred hcCCeEEE---eecchh---hhhcCCCcceEeec---cC-cchhhhhHhcCCcEEeccC------cCCH------HHHHH
Q 022321 160 IKDRGLIV---SWCNQE---QVLLHPSVGAFLTH---CG-WNSTMESICGGVPVICWPF------FAEQ------QTNCR 217 (299)
Q Consensus 160 ~~~n~~v~---~~~pq~---~iL~~~~v~~fItH---gG-~~s~~Eal~~GvP~i~~P~------~~DQ------~~na~ 217 (299)
+++++.+. +++++. .+++.+++ |+.- =| -++++||+++|+|+|+.-. .+|+ ..+..
T Consensus 199 l~~~V~f~g~~G~~~~~dl~~~y~~aDi--fV~PS~~EgfGlvlLEAMA~G~PVVas~~~~l~Ei~g~~~~~Li~~~~v~ 276 (335)
T PHA01633 199 VPANVHFVAEFGHNSREYIFAFYGAMDF--TIVPSGTEGFGMPVLESMAMGTPVIHQLMPPLDEFTSWQWNLLIKSSKVE 276 (335)
T ss_pred CCCcEEEEecCCCCCHHHHHHHHHhCCE--EEECCccccCCHHHHHHHHcCCCEEEccCCCceeecCCccceeeCCCCHH
Confidence 45778877 444543 57888888 7752 24 3578999999999999633 2332 22232
Q ss_pred HHHH-HhCceEEecCCCCHHHHHHHHHHHhcC
Q 022321 218 YACT-TWGIGMEVNHDVKRGDIEALVKEMMEG 248 (299)
Q Consensus 218 ~v~~-~~g~G~~l~~~~~~~~l~~av~~ll~~ 248 (299)
.... ..|.|..++ ..+++++.+++.+++..
T Consensus 277 ~~~~~~~g~g~~~~-~~d~~~la~ai~~~~~~ 307 (335)
T PHA01633 277 EYYDKEHGQKWKIH-KFQIEDMANAIILAFEL 307 (335)
T ss_pred HhcCcccCceeeec-CCCHHHHHHHHHHHHhc
Confidence 2211 346676665 57999999999998654
No 109
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=96.21 E-value=0.48 Score=45.07 Aligned_cols=79 Identities=14% Similarity=0.108 Sum_probs=56.2
Q ss_pred cCCeEEEeecchhh---hhcCCCcceEee-----ccCcchhhhhHhcCCcEEeccCcCCHHHHHHHHHH---HhCceEEe
Q 022321 161 KDRGLIVSWCNQEQ---VLLHPSVGAFLT-----HCGWNSTMESICGGVPVICWPFFAEQQTNCRYACT---TWGIGMEV 229 (299)
Q Consensus 161 ~~n~~v~~~~pq~~---iL~~~~v~~fIt-----HgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~---~~g~G~~l 229 (299)
.+++.+.+++|+.+ +|+.+++ +|+ |-| .++.||+++|+|+|+.-..+.- ...+ + .-..|...
T Consensus 304 ~~~V~f~g~v~~~~l~~~l~~adv--~v~~s~~E~Fg-i~~lEAMa~G~pvIa~~~ggp~---~~iv-~~~~~g~~G~l~ 376 (419)
T cd03806 304 EDKVEFVVNAPFEELLEELSTASI--GLHTMWNEHFG-IGVVEYMAAGLIPLAHASGGPL---LDIV-VPWDGGPTGFLA 376 (419)
T ss_pred CCeEEEecCCCHHHHHHHHHhCeE--EEECCccCCcc-cHHHHHHHcCCcEEEEcCCCCc---hhee-eccCCCCceEEe
Confidence 56888889988654 8888888 553 222 4889999999999986543311 1112 2 33567765
Q ss_pred cCCCCHHHHHHHHHHHhcCC
Q 022321 230 NHDVKRGDIEALVKEMMEGD 249 (299)
Q Consensus 230 ~~~~~~~~l~~av~~ll~~~ 249 (299)
. +.+++.++|.++++++
T Consensus 377 ~---d~~~la~ai~~ll~~~ 393 (419)
T cd03806 377 S---TAEEYAEAIEKILSLS 393 (419)
T ss_pred C---CHHHHHHHHHHHHhCC
Confidence 3 8999999999999875
No 110
>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=96.20 E-value=0.4 Score=47.51 Aligned_cols=194 Identities=14% Similarity=0.126 Sum_probs=100.7
Q ss_pred cccccHHHHHHHHhcCCCEEEeC-cccCCcccccccccccCCCCCcccchhhhHhhccCCCCceEEEeecCCcccCHHHH
Q 022321 44 FDEFEHAALEVIASKFPNIYTVG-PLPLLCKQVDETKFRSFGSSLWKEDTDCLKWLDKRDANSVVYVNYGSVTVMSEQHL 122 (299)
Q Consensus 44 ~~~LE~~~~~~~r~~~p~v~~VG-pl~~~~~~~~~~~~~~l~~~~~~~~~~~~~wl~~~~~~~vVyvsfGS~~~~~~~~~ 122 (299)
...+|.+++ +...-++.+|| |+...-... ....+..+-+.-.+++++|-+--||-.+--...+
T Consensus 368 IfPFE~~~y---~~~gv~v~yVGHPL~d~i~~~-------------~~~~~~r~~lgl~~~~~iIaLLPGSR~~EI~rll 431 (608)
T PRK01021 368 ILPFEQNLF---KDSPLRTVYLGHPLVETISSF-------------SPNLSWKEQLHLPSDKPIVAAFPGSRRGDILRNL 431 (608)
T ss_pred cCccCHHHH---HhcCCCeEEECCcHHhhcccC-------------CCHHHHHHHcCCCCCCCEEEEECCCCHHHHHHHH
Confidence 456787755 45556899999 665321100 0111122223333466899999999743222334
Q ss_pred HHHHHHHH--c--CCCCEEEEEcCCCCCCCCcCCChhhhhhhcC----CeEEEeecchhhhhcCCCcceEeeccCcchhh
Q 022321 123 TEFAWGLA--N--SKRPFLWILRPDVVMGDSVVLPDEYFEEIKD----RGLIVSWCNQEQVLLHPSVGAFLTHCGWNSTM 194 (299)
Q Consensus 123 ~~l~~al~--~--~~~~~iw~~~~~~~~~~~~~l~~~~~~~~~~----n~~v~~~~pq~~iL~~~~v~~fItHgG~~s~~ 194 (299)
-.++++.+ . .+.+|+....+.. ..+.+.+.+.+ .+.+..--...++++.+++ .+.-+|. .++
T Consensus 432 Pv~l~aa~~~~l~~~l~fvvp~a~~~-------~~~~i~~~~~~~~~~~~~ii~~~~~~~~m~aaD~--aLaaSGT-aTL 501 (608)
T PRK01021 432 TIQVQAFLASSLASTHQLLVSSANPK-------YDHLILEVLQQEGCLHSHIVPSQFRYELMRECDC--ALAKCGT-IVL 501 (608)
T ss_pred HHHHHHHHHHHhccCeEEEEecCchh-------hHHHHHHHHhhcCCCCeEEecCcchHHHHHhcCe--eeecCCH-HHH
Confidence 44555554 2 2455655432210 11112221211 1222210012578888888 7777775 568
Q ss_pred hhHhcCCcEEeccCcC-CHHHHHHHHHHHh-----C-----ceEEe----c---CCCCHHHHHHHHHHHhcCCh-hHHHH
Q 022321 195 ESICGGVPVICWPFFA-EQQTNCRYACTTW-----G-----IGMEV----N---HDVKRGDIEALVKEMMEGDE-GKKMR 255 (299)
Q Consensus 195 Eal~~GvP~i~~P~~~-DQ~~na~~v~~~~-----g-----~G~~l----~---~~~~~~~l~~av~~ll~~~~-~~~~r 255 (299)
|+...|+||+++=... =-+.-++++ ... + +|..+ - .+.|++.|.+++ ++|.|+. .++++
T Consensus 502 EaAL~g~PmVV~YK~s~Lty~Iak~L-vki~i~yIsLpNIIagr~VvPEllqgQ~~~tpe~La~~l-~lL~d~~~r~~~~ 579 (608)
T PRK01021 502 ETALNQTPTIVTCQLRPFDTFLAKYI-FKIILPAYSLPNIILGSTIFPEFIGGKKDFQPEEVAAAL-DILKTSQSKEKQK 579 (608)
T ss_pred HHHHhCCCEEEEEecCHHHHHHHHHH-HhccCCeeehhHHhcCCCcchhhcCCcccCCHHHHHHHH-HHhcCHHHHHHHH
Confidence 9999999999853322 122345555 221 0 11111 1 257899999997 7787762 23445
Q ss_pred HHHHHHHHHH
Q 022321 256 QKAWEWKKKA 265 (299)
Q Consensus 256 ~~a~~l~~~~ 265 (299)
+..+++++.+
T Consensus 580 ~~l~~lr~~L 589 (608)
T PRK01021 580 DACRDLYQAM 589 (608)
T ss_pred HHHHHHHHHh
Confidence 5555554443
No 111
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=96.01 E-value=0.22 Score=52.34 Aligned_cols=95 Identities=12% Similarity=0.103 Sum_probs=63.3
Q ss_pred cCCeEEEeecchhh---hhcCCC--cceEeec---cC-cchhhhhHhcCCcEEeccCcCCHHHHHHHHHHHhCceEEecC
Q 022321 161 KDRGLIVSWCNQEQ---VLLHPS--VGAFLTH---CG-WNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNH 231 (299)
Q Consensus 161 ~~n~~v~~~~pq~~---iL~~~~--v~~fItH---gG-~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~ 231 (299)
.+++.+.+++++.+ ++..++ .++||.- =| -.+++||+++|+|+|+....+ ....+ +.-..|+.++
T Consensus 547 ~g~V~FlG~v~~edvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAcGlPVVASdvGG----~~EII-~~g~nGlLVd- 620 (1050)
T TIGR02468 547 YGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPMVATKNGG----PVDIH-RVLDNGLLVD- 620 (1050)
T ss_pred CCeEEecCCCCHHHHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHhCCCEEEeCCCC----cHHHh-ccCCcEEEEC-
Confidence 46777788887754 565552 1237653 23 368999999999999987643 22233 4445687776
Q ss_pred CCCHHHHHHHHHHHhcCCh-hHHHHHHHHHH
Q 022321 232 DVKRGDIEALVKEMMEGDE-GKKMRQKAWEW 261 (299)
Q Consensus 232 ~~~~~~l~~av~~ll~~~~-~~~~r~~a~~l 261 (299)
.-+.+.|.++|.++++|++ .++|.+++.+.
T Consensus 621 P~D~eaLA~AL~~LL~Dpelr~~m~~~gr~~ 651 (1050)
T TIGR02468 621 PHDQQAIADALLKLVADKQLWAECRQNGLKN 651 (1050)
T ss_pred CCCHHHHHHHHHHHhhCHHHHHHHHHHHHHH
Confidence 4578999999999999873 23455555443
No 112
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=95.82 E-value=0.39 Score=47.28 Aligned_cols=114 Identities=16% Similarity=0.082 Sum_probs=67.8
Q ss_pred cCCeEEEeecchh-hhhcCCCcceEee---ccC-cchhhhhHhcCCcEEeccCcCCHHHHHHHHHHHhCceEEecCCCCH
Q 022321 161 KDRGLIVSWCNQE-QVLLHPSVGAFLT---HCG-WNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVKR 235 (299)
Q Consensus 161 ~~n~~v~~~~pq~-~iL~~~~v~~fIt---HgG-~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~ 235 (299)
.+++.+.+|.... .+|+.+++ ||. +-| -++++||+++|+|+|+.... .+...+ .+-..|..+.. -+.
T Consensus 454 ~d~V~FlG~~~Dv~~~LaaADV--fVlPS~~EGfp~vlLEAMA~GlPVVATdvG----G~~EiV-~dG~nG~LVp~-~D~ 525 (578)
T PRK15490 454 LERILFVGASRDVGYWLQKMNV--FILFSRYEGLPNVLIEAQMVGVPVISTPAG----GSAECF-IEGVSGFILDD-AQT 525 (578)
T ss_pred CCcEEECCChhhHHHHHHhCCE--EEEcccccCccHHHHHHHHhCCCEEEeCCC----CcHHHc-ccCCcEEEECC-CCh
Confidence 4778888886543 48888888 875 234 56999999999999988763 344555 55567888764 344
Q ss_pred HHHHHHH---HHHhcCChhHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHh
Q 022321 236 GDIEALV---KEMMEGDEGKKMRQKAWEWKKKAEAATAVGGQSYNNFDRLVKMVLH 288 (299)
Q Consensus 236 ~~l~~av---~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gg~s~~~l~~~v~~l~~ 288 (299)
+.+.+++ ..+.... +...++++..++.+.+..+...-+.+..+.+.+
T Consensus 526 ~aLa~ai~lA~aL~~ll------~~~~~mg~~ARe~V~e~FS~e~Mv~~y~ki~~~ 575 (578)
T PRK15490 526 VNLDQACRYAEKLVNLW------RSRTGICQQTQSFLQERFTVEHMVGTFVKTIAS 575 (578)
T ss_pred hhHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHh
Confidence 4455444 2223211 111223334444444455655555555554443
No 113
>PF06722 DUF1205: Protein of unknown function (DUF1205); InterPro: IPR010610 This entry represents a conserved region of unknown function within bacterial glycosyl transferases. Many proteins containing this domain are members of the glycosyl transferase family 28 IPR004276 from INTERPRO.; PDB: 3OTH_A 3OTG_A 3OTI_A 3D0R_A 3D0Q_B 2P6P_A 3UYK_A 3UYL_B 3TSA_B 2YJN_A.
Probab=95.78 E-value=0.0094 Score=44.76 Aligned_cols=51 Identities=20% Similarity=0.182 Sum_probs=42.2
Q ss_pred hhhHhhccCCCCceEEEeecCCccc---CH--HHHHHHHHHHHcCCCCEEEEEcCC
Q 022321 93 DCLKWLDKRDANSVVYVNYGSVTVM---SE--QHLTEFAWGLANSKRPFLWILRPD 143 (299)
Q Consensus 93 ~~~~wl~~~~~~~vVyvsfGS~~~~---~~--~~~~~l~~al~~~~~~~iw~~~~~ 143 (299)
.+..|+...+.++.|+|++||.... .. ..+..++++++..+..++.++...
T Consensus 29 ~~P~Wl~~~~~RpRVcvT~G~~~~~~~g~~~~~~l~~ll~ala~ldvEvV~a~~~~ 84 (97)
T PF06722_consen 29 VVPDWLLEPPGRPRVCVTLGTSVRMFFGPGGVPLLRRLLEALAGLDVEVVVALPAA 84 (97)
T ss_dssp EEEGGGSSSTSSEEEEEEETHHHCHHHSCHHHCHHHHHHHHHHTSSSEEEEEETTC
T ss_pred CCCcccccCCCCCEEEEEcCCCccccccccchHHHHHHHHHHhhCCcEEEEECCHH
Confidence 4567999888999999999998543 22 478899999999999999998854
No 114
>PRK14098 glycogen synthase; Provisional
Probab=95.78 E-value=0.22 Score=48.46 Aligned_cols=133 Identities=11% Similarity=0.007 Sum_probs=74.9
Q ss_pred eEEEeecCCcc-cCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCcCCChhhhhhhcCCeEEEeecchh---hhhcCCCc
Q 022321 106 VVYVNYGSVTV-MSEQHLTEFAWGLANSKRPFLWILRPDVVMGDSVVLPDEYFEEIKDRGLIVSWCNQE---QVLLHPSV 181 (299)
Q Consensus 106 vVyvsfGS~~~-~~~~~~~~l~~al~~~~~~~iw~~~~~~~~~~~~~l~~~~~~~~~~n~~v~~~~pq~---~iL~~~~v 181 (299)
.++...|.... ...+.+.+.+..+.+.+.+++.+-.+... ....+ ..+..+.++++.+..+++.. .+++.+++
T Consensus 308 ~~i~~vgRl~~~KG~d~li~a~~~l~~~~~~lvivG~G~~~--~~~~l-~~l~~~~~~~V~~~g~~~~~~~~~~~a~aDi 384 (489)
T PRK14098 308 PLVGVIINFDDFQGAELLAESLEKLVELDIQLVICGSGDKE--YEKRF-QDFAEEHPEQVSVQTEFTDAFFHLAIAGLDM 384 (489)
T ss_pred CEEEEeccccccCcHHHHHHHHHHHHhcCcEEEEEeCCCHH--HHHHH-HHHHHHCCCCEEEEEecCHHHHHHHHHhCCE
Confidence 45556666632 23344444444444446665554321100 00001 12223446788888888764 58888888
Q ss_pred ceEeecc---Cc-chhhhhHhcCCcEEeccCcC--CHHHHHHHHHHHhCceEEecCCCCHHHHHHHHHHHhc
Q 022321 182 GAFLTHC---GW-NSTMESICGGVPVICWPFFA--EQQTNCRYACTTWGIGMEVNHDVKRGDIEALVKEMME 247 (299)
Q Consensus 182 ~~fItHg---G~-~s~~Eal~~GvP~i~~P~~~--DQ~~na~~v~~~~g~G~~l~~~~~~~~l~~av~~ll~ 247 (299)
|+.-. |. .+.+||+++|+|.|+....+ |.-.+ .. +.-+.|..+. .-+.+++.++|.+++.
T Consensus 385 --~l~PS~~E~~Gl~~lEAma~G~ppVv~~~GGl~d~v~~--~~-~~~~~G~l~~-~~d~~~la~ai~~~l~ 450 (489)
T PRK14098 385 --LLMPGKIESCGMLQMFAMSYGTIPVAYAGGGIVETIEE--VS-EDKGSGFIFH-DYTPEALVAKLGEALA 450 (489)
T ss_pred --EEeCCCCCCchHHHHHHHhCCCCeEEecCCCCceeeec--CC-CCCCceeEeC-CCCHHHHHHHHHHHHH
Confidence 66432 21 37889999999888876532 21111 01 1236777775 4678999999998763
No 115
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1
Probab=95.69 E-value=0.11 Score=38.00 Aligned_cols=82 Identities=15% Similarity=0.099 Sum_probs=50.1
Q ss_pred ccCcchhhhhHhcCCcEEeccCcCCHHHHHHHHHHHhC-ceEEecCCCCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHH
Q 022321 187 HCGWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWG-IGMEVNHDVKRGDIEALVKEMMEGDEGKKMRQKAWEWKKKA 265 (299)
Q Consensus 187 HgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g-~G~~l~~~~~~~~l~~av~~ll~~~~~~~~r~~a~~l~~~~ 265 (299)
+|-..-+.|++++|+|+|+-+. ......+ . .| -++... +.+++.++|..+++|++ ..++ +++..
T Consensus 9 ~~~~~r~~E~~a~G~~vi~~~~----~~~~~~~-~-~~~~~~~~~---~~~el~~~i~~ll~~~~--~~~~----ia~~a 73 (92)
T PF13524_consen 9 DGPNMRIFEAMACGTPVISDDS----PGLREIF-E-DGEHIITYN---DPEELAEKIEYLLENPE--ERRR----IAKNA 73 (92)
T ss_pred CCCchHHHHHHHCCCeEEECCh----HHHHHHc-C-CCCeEEEEC---CHHHHHHHHHHHHCCHH--HHHH----HHHHH
Confidence 4445689999999999999766 3333333 2 24 344333 89999999999999872 2222 23333
Q ss_pred HHHHhcCCchHHHHHHHH
Q 022321 266 EAATAVGGQSYNNFDRLV 283 (299)
Q Consensus 266 ~~a~~~gg~s~~~l~~~v 283 (299)
++-+....+...-+.+|+
T Consensus 74 ~~~v~~~~t~~~~~~~il 91 (92)
T PF13524_consen 74 RERVLKRHTWEHRAEQIL 91 (92)
T ss_pred HHHHHHhCCHHHHHHHHH
Confidence 333344555544444443
No 116
>PLN02275 transferase, transferring glycosyl groups
Probab=95.55 E-value=0.28 Score=45.77 Aligned_cols=75 Identities=11% Similarity=0.153 Sum_probs=53.5
Q ss_pred CCeEEEe-ecchhh---hhcCCCcceEee----c--cC-cchhhhhHhcCCcEEeccCcCCHHHHHHHHHHHhCceEEec
Q 022321 162 DRGLIVS-WCNQEQ---VLLHPSVGAFLT----H--CG-WNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVN 230 (299)
Q Consensus 162 ~n~~v~~-~~pq~~---iL~~~~v~~fIt----H--gG-~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~ 230 (299)
+|+.+.. |+|+.+ +|+.+++ ||. . -| -++++||+++|+|+|+.... .+...+ +.-+.|..+.
T Consensus 286 ~~v~~~~~~~~~~~~~~~l~~aDv--~v~~~~s~~~e~~p~~llEAmA~G~PVVa~~~g----g~~eiv-~~g~~G~lv~ 358 (371)
T PLN02275 286 RHVAFRTMWLEAEDYPLLLGSADL--GVSLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS----CIGELV-KDGKNGLLFS 358 (371)
T ss_pred CceEEEcCCCCHHHHHHHHHhCCE--EEEeccccccccccHHHHHHHHCCCCEEEecCC----ChHHHc-cCCCCeEEEC
Confidence 4555544 788755 5989999 763 1 12 35799999999999997542 255555 6666898876
Q ss_pred CCCCHHHHHHHHHHHh
Q 022321 231 HDVKRGDIEALVKEMM 246 (299)
Q Consensus 231 ~~~~~~~l~~av~~ll 246 (299)
+.+++.++|.+++
T Consensus 359 ---~~~~la~~i~~l~ 371 (371)
T PLN02275 359 ---SSSELADQLLELL 371 (371)
T ss_pred ---CHHHHHHHHHHhC
Confidence 5888998888764
No 117
>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length. They are found in archaea and some bacteria and have no known function.
Probab=95.50 E-value=0.56 Score=43.35 Aligned_cols=138 Identities=19% Similarity=0.169 Sum_probs=80.8
Q ss_pred cchhhhHhhccCCCCceEEEeecCCc----ccCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCcCCChhhhhhhcCCeE
Q 022321 90 EDTDCLKWLDKRDANSVVYVNYGSVT----VMSEQHLTEFAWGLANSKRPFLWILRPDVVMGDSVVLPDEYFEEIKDRGL 165 (299)
Q Consensus 90 ~~~~~~~wl~~~~~~~vVyvsfGS~~----~~~~~~~~~l~~al~~~~~~~iw~~~~~~~~~~~~~l~~~~~~~~~~n~~ 165 (299)
++.+..+-+... +.+.|++-+-+.. ......+.++++.|++.+..++..-+... .+ ...++. ++.
T Consensus 166 Pd~~vl~~lg~~-~~~yIvvR~~~~~A~y~~~~~~i~~~ii~~L~~~~~~vV~ipr~~~-------~~-~~~~~~--~~~ 234 (335)
T PF04007_consen 166 PDPEVLKELGLD-DEPYIVVRPEAWKASYDNGKKSILPEIIEELEKYGRNVVIIPRYED-------QR-ELFEKY--GVI 234 (335)
T ss_pred CChhHHHHcCCC-CCCEEEEEeccccCeeecCccchHHHHHHHHHhhCceEEEecCCcc-------hh-hHHhcc--Ccc
Confidence 344444445432 5678888887752 12335567889999888776444433210 11 111111 222
Q ss_pred EE-eecchhhhhcCCCcceEeeccCcchhhhhHhcCCcEEeccCcCCHHHHHHHHHHHhCceEEecCCCCHHHHHHHHHH
Q 022321 166 IV-SWCNQEQVLLHPSVGAFLTHCGWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVKRGDIEALVKE 244 (299)
Q Consensus 166 v~-~~~pq~~iL~~~~v~~fItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~l~~av~~ 244 (299)
+- .-+.-.++|.++++ +|+-|| ....||..-|+|.|.+ +-++-...-+.+ .+.|.-.. ..+.+++.+.|.+
T Consensus 235 i~~~~vd~~~Ll~~a~l--~Ig~gg-TMa~EAA~LGtPaIs~-~~g~~~~vd~~L-~~~Gll~~---~~~~~ei~~~v~~ 306 (335)
T PF04007_consen 235 IPPEPVDGLDLLYYADL--VIGGGG-TMAREAALLGTPAISC-FPGKLLAVDKYL-IEKGLLYH---STDPDEIVEYVRK 306 (335)
T ss_pred ccCCCCCHHHHHHhcCE--EEeCCc-HHHHHHHHhCCCEEEe-cCCcchhHHHHH-HHCCCeEe---cCCHHHHHHHHHH
Confidence 22 33455589999999 999777 7889999999999974 222222233445 45566332 3477777776655
Q ss_pred Hh
Q 022321 245 MM 246 (299)
Q Consensus 245 ll 246 (299)
.+
T Consensus 307 ~~ 308 (335)
T PF04007_consen 307 NL 308 (335)
T ss_pred hh
Confidence 44
No 118
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=95.49 E-value=0.33 Score=46.79 Aligned_cols=132 Identities=11% Similarity=0.004 Sum_probs=74.3
Q ss_pred ceEEEeecCCcc-cCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCcCCChhhhhhhcCCeEEEeecchh---hhhcCCC
Q 022321 105 SVVYVNYGSVTV-MSEQHLTEFAWGLANSKRPFLWILRPDVVMGDSVVLPDEYFEEIKDRGLIVSWCNQE---QVLLHPS 180 (299)
Q Consensus 105 ~vVyvsfGS~~~-~~~~~~~~l~~al~~~~~~~iw~~~~~~~~~~~~~l~~~~~~~~~~n~~v~~~~pq~---~iL~~~~ 180 (299)
..+++..|.... ...+.+.+.+..+.+.+.+++++-.... ...+.+ ..+..+.+.++.+....+.. .+++.++
T Consensus 291 ~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~lvi~G~g~~--~~~~~l-~~~~~~~~~~v~~~~~~~~~~~~~~~~~aD 367 (473)
T TIGR02095 291 VPLFGVISRLTQQKGVDLLLAALPELLELGGQLVVLGTGDP--ELEEAL-RELAERYPGNVRVIIGYDEALAHLIYAGAD 367 (473)
T ss_pred CCEEEEEecCccccChHHHHHHHHHHHHcCcEEEEECCCCH--HHHHHH-HHHHHHCCCcEEEEEcCCHHHHHHHHHhCC
Confidence 345556677642 3334444444444444566665432210 000000 11222345666665545543 4788888
Q ss_pred cceEee--c-cCc-chhhhhHhcCCcEEeccCcCCHHHHHHHHHHHh------CceEEecCCCCHHHHHHHHHHHhc
Q 022321 181 VGAFLT--H-CGW-NSTMESICGGVPVICWPFFAEQQTNCRYACTTW------GIGMEVNHDVKRGDIEALVKEMME 247 (299)
Q Consensus 181 v~~fIt--H-gG~-~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~------g~G~~l~~~~~~~~l~~av~~ll~ 247 (299)
+ |+. + -|. .+++||+++|+|.|+....+ ....+ ... +.|..+. .-+.+++.++|.+++.
T Consensus 368 v--~l~pS~~E~~gl~~lEAma~G~pvI~s~~gg----~~e~v-~~~~~~~~~~~G~l~~-~~d~~~la~~i~~~l~ 436 (473)
T TIGR02095 368 F--ILMPSRFEPCGLTQLYAMRYGTVPIVRRTGG----LADTV-VDGDPEAESGTGFLFE-EYDPGALLAALSRALR 436 (473)
T ss_pred E--EEeCCCcCCcHHHHHHHHHCCCCeEEccCCC----ccceE-ecCCCCCCCCceEEeC-CCCHHHHHHHHHHHHH
Confidence 8 663 2 233 37899999999999876532 11122 222 6787776 4688899999999886
No 119
>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing. This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.
Probab=95.43 E-value=0.21 Score=46.74 Aligned_cols=130 Identities=12% Similarity=0.164 Sum_probs=78.8
Q ss_pred CceEEEeecCC---cccCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCcCCChhhhhhh--cCCeEEEeecc---hhhh
Q 022321 104 NSVVYVNYGSV---TVMSEQHLTEFAWGLANSKRPFLWILRPDVVMGDSVVLPDEYFEEI--KDRGLIVSWCN---QEQV 175 (299)
Q Consensus 104 ~~vVyvsfGS~---~~~~~~~~~~l~~al~~~~~~~iw~~~~~~~~~~~~~l~~~~~~~~--~~n~~v~~~~p---q~~i 175 (299)
+++|+|.+=.. ...+.+.+..++++|.+.+..+++++.... ... ....+.+.... .+++.+.+-++ ...+
T Consensus 201 ~~~vlvt~Hp~~~~~~~~~~~l~~li~~L~~~~~~~~vi~P~~~-p~~-~~i~~~i~~~~~~~~~v~l~~~l~~~~~l~L 278 (365)
T TIGR03568 201 KPYALVTFHPVTLEKESAEEQIKELLKALDELNKNYIFTYPNAD-AGS-RIINEAIEEYVNEHPNFRLFKSLGQERYLSL 278 (365)
T ss_pred CCEEEEEeCCCcccccCchHHHHHHHHHHHHhccCCEEEEeCCC-CCc-hHHHHHHHHHhcCCCCEEEECCCChHHHHHH
Confidence 46777877543 234467789999999887766666543210 000 00111111111 35788776544 4568
Q ss_pred hcCCCcceEeeccCcchhhhhHhcCCcEEeccCcCCHHHHHHHHHHHhCceEEecCCCCHHHHHHHHHHHhc
Q 022321 176 LLHPSVGAFLTHCGWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVKRGDIEALVKEMME 247 (299)
Q Consensus 176 L~~~~v~~fItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~l~~av~~ll~ 247 (299)
+.++++ +||-.+.+- .||.+.|+|.|.+- +-+ .- .+.|..+.+- ..+.++|.+++.++++
T Consensus 279 l~~a~~--vitdSSggi-~EA~~lg~Pvv~l~---~R~---e~--~~~g~nvl~v-g~~~~~I~~a~~~~~~ 338 (365)
T TIGR03568 279 LKNADA--VIGNSSSGI-IEAPSFGVPTINIG---TRQ---KG--RLRADSVIDV-DPDKEEIVKAIEKLLD 338 (365)
T ss_pred HHhCCE--EEEcChhHH-HhhhhcCCCEEeec---CCc---hh--hhhcCeEEEe-CCCHHHHHHHHHHHhC
Confidence 989999 998875554 99999999999764 211 11 1234333311 4688999999999553
No 120
>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1. This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=95.32 E-value=0.58 Score=45.95 Aligned_cols=91 Identities=10% Similarity=0.121 Sum_probs=65.1
Q ss_pred CCeEEEeecc--hh-hhhcCCCcceEeecc---CcchhhhhHhcCCcEEeccCcCCHHHHHHHHHHHhCceEEecCCCCH
Q 022321 162 DRGLIVSWCN--QE-QVLLHPSVGAFLTHC---GWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVKR 235 (299)
Q Consensus 162 ~n~~v~~~~p--q~-~iL~~~~v~~fItHg---G~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~ 235 (299)
.++.+.++.. +. .++.+..+ +|.=+ |.++.+||+++|+|+| .......+ +...-|..+. +.
T Consensus 409 ~~v~f~gy~~e~dl~~~~~~arl--~id~s~~eg~~~~ieAiS~GiPqI-------nyg~~~~V-~d~~NG~li~---d~ 475 (519)
T TIGR03713 409 ERIAFTTLTNEEDLISALDKLRL--IIDLSKEPDLYTQISGISAGIPQI-------NKVETDYV-EHNKNGYIID---DI 475 (519)
T ss_pred cEEEEEecCCHHHHHHHHhhheE--EEECCCCCChHHHHHHHHcCCCee-------ecCCceee-EcCCCcEEeC---CH
Confidence 4677788877 33 47877777 87655 6779999999999999 22334455 6667787774 88
Q ss_pred HHHHHHHHHHhcCC-hhHHHHHHHHHHHHHH
Q 022321 236 GDIEALVKEMMEGD-EGKKMRQKAWEWKKKA 265 (299)
Q Consensus 236 ~~l~~av~~ll~~~-~~~~~r~~a~~l~~~~ 265 (299)
.++.+++..+|.+. .+..+...|-+.++..
T Consensus 476 ~~l~~al~~~L~~~~~wn~~~~~sy~~~~~y 506 (519)
T TIGR03713 476 SELLKALDYYLDNLKNWNYSLAYSIKLIDDY 506 (519)
T ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHHHHHh
Confidence 99999999999986 3344555555544443
No 121
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=95.25 E-value=0.26 Score=47.39 Aligned_cols=133 Identities=12% Similarity=0.047 Sum_probs=72.7
Q ss_pred ceEEEeecCCc-ccCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCcCCChh---hhhhhcCCeEEEeecchh---hhhc
Q 022321 105 SVVYVNYGSVT-VMSEQHLTEFAWGLANSKRPFLWILRPDVVMGDSVVLPDE---YFEEIKDRGLIVSWCNQE---QVLL 177 (299)
Q Consensus 105 ~vVyvsfGS~~-~~~~~~~~~l~~al~~~~~~~iw~~~~~~~~~~~~~l~~~---~~~~~~~n~~v~~~~pq~---~iL~ 177 (299)
..+++..|... ....+.+.+.+..+.+.+.+|+++-... ..+.+. +..+.++|+.+..-.++. .+++
T Consensus 296 ~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~lvi~G~g~------~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 369 (476)
T cd03791 296 APLFGFVGRLTEQKGIDLLLEALPELLELGGQLVILGSGD------PEYEEALRELAARYPGRVAVLIGYDEALAHLIYA 369 (476)
T ss_pred CCEEEEEeeccccccHHHHHHHHHHHHHcCcEEEEEecCC------HHHHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHH
Confidence 34566677764 2233444444444444456665543321 001111 122235677654333432 3778
Q ss_pred CCCcceEeec---cCc-chhhhhHhcCCcEEeccCcC--CHHHHHHHHHHHhCceEEecCCCCHHHHHHHHHHHhc
Q 022321 178 HPSVGAFLTH---CGW-NSTMESICGGVPVICWPFFA--EQQTNCRYACTTWGIGMEVNHDVKRGDIEALVKEMME 247 (299)
Q Consensus 178 ~~~v~~fItH---gG~-~s~~Eal~~GvP~i~~P~~~--DQ~~na~~v~~~~g~G~~l~~~~~~~~l~~av~~ll~ 247 (299)
.+++ |+.- -|. .+.+||+++|+|+|+....+ |--.+...- ...|.|..+. .-+.+++.+++.++++
T Consensus 370 ~aDv--~l~pS~~E~~gl~~lEAma~G~pvI~~~~gg~~e~v~~~~~~-~~~~~G~~~~-~~~~~~l~~~i~~~l~ 441 (476)
T cd03791 370 GADF--FLMPSRFEPCGLTQMYAMRYGTVPIVRATGGLADTVIDYNED-TGEGTGFVFE-GYNADALLAALRRALA 441 (476)
T ss_pred hCCE--EECCCCCCCCcHHHHHHhhCCCCCEECcCCCccceEeCCcCC-CCCCCeEEeC-CCCHHHHHHHHHHHHH
Confidence 8888 6632 122 47899999999999876532 211111100 1234788876 4578999999999886
No 122
>PRK00654 glgA glycogen synthase; Provisional
Probab=95.08 E-value=0.64 Score=44.83 Aligned_cols=136 Identities=9% Similarity=0.045 Sum_probs=72.1
Q ss_pred ceEEEeecCCcc-cCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCcCCChhhhhhhcCCeEE-Eeecch--hhhhcCCC
Q 022321 105 SVVYVNYGSVTV-MSEQHLTEFAWGLANSKRPFLWILRPDVVMGDSVVLPDEYFEEIKDRGLI-VSWCNQ--EQVLLHPS 180 (299)
Q Consensus 105 ~vVyvsfGS~~~-~~~~~~~~l~~al~~~~~~~iw~~~~~~~~~~~~~l~~~~~~~~~~n~~v-~~~~pq--~~iL~~~~ 180 (299)
..+++..|.... ...+.+.+.+..+.+.+.+++++-.+... ....+ ..+..+.+.++.+ .+|-.. ..+++.++
T Consensus 282 ~~~i~~vGRl~~~KG~~~li~a~~~l~~~~~~lvivG~g~~~--~~~~l-~~l~~~~~~~v~~~~g~~~~~~~~~~~~aD 358 (466)
T PRK00654 282 APLFAMVSRLTEQKGLDLVLEALPELLEQGGQLVLLGTGDPE--LEEAF-RALAARYPGKVGVQIGYDEALAHRIYAGAD 358 (466)
T ss_pred CcEEEEeeccccccChHHHHHHHHHHHhcCCEEEEEecCcHH--HHHHH-HHHHHHCCCcEEEEEeCCHHHHHHHHhhCC
Confidence 345566677632 23333333333333346777665322100 00000 1122334556553 456322 24788888
Q ss_pred cceEee---ccCc-chhhhhHhcCCcEEeccCcC--CHHHHHHHHHHHhCceEEecCCCCHHHHHHHHHHHhc
Q 022321 181 VGAFLT---HCGW-NSTMESICGGVPVICWPFFA--EQQTNCRYACTTWGIGMEVNHDVKRGDIEALVKEMME 247 (299)
Q Consensus 181 v~~fIt---HgG~-~s~~Eal~~GvP~i~~P~~~--DQ~~na~~v~~~~g~G~~l~~~~~~~~l~~av~~ll~ 247 (299)
+ ||. +-|. .+.+||+++|+|.|+....+ |.-.+...- ...+.|..+. .-+.+++.+++.++++
T Consensus 359 v--~v~PS~~E~~gl~~lEAma~G~p~V~~~~gG~~e~v~~~~~~-~~~~~G~lv~-~~d~~~la~~i~~~l~ 427 (466)
T PRK00654 359 M--FLMPSRFEPCGLTQLYALRYGTLPIVRRTGGLADTVIDYNPE-DGEATGFVFD-DFNAEDLLRALRRALE 427 (466)
T ss_pred E--EEeCCCCCCchHHHHHHHHCCCCEEEeCCCCccceeecCCCC-CCCCceEEeC-CCCHHHHHHHHHHHHH
Confidence 8 653 2233 48999999999999875432 211110000 1126788776 4678999999999886
No 123
>PHA01630 putative group 1 glycosyl transferase
Probab=94.40 E-value=0.88 Score=41.94 Aligned_cols=78 Identities=10% Similarity=0.012 Sum_probs=47.0
Q ss_pred ecchhh---hhcCCCcceEeecc-C-cchhhhhHhcCCcEEeccCcC--CHHH---HHHHHHHH-----------hCceE
Q 022321 169 WCNQEQ---VLLHPSVGAFLTHC-G-WNSTMESICGGVPVICWPFFA--EQQT---NCRYACTT-----------WGIGM 227 (299)
Q Consensus 169 ~~pq~~---iL~~~~v~~fItHg-G-~~s~~Eal~~GvP~i~~P~~~--DQ~~---na~~v~~~-----------~g~G~ 227 (299)
++|..+ +++.+++-++-++. | -.+++||+++|+|+|+.-..+ |.-. |+-.+ +. .++|.
T Consensus 197 ~v~~~~l~~~y~~aDv~v~pS~~E~fgl~~lEAMA~G~PVIas~~gg~~E~i~~~~ng~lv-~~~~~~~~~~~~~~~~G~ 275 (331)
T PHA01630 197 PLPDDDIYSLFAGCDILFYPVRGGAFEIPVIEALALGLDVVVTEKGAWSEWVLSNLDVYWI-KSGRKPKLWYTNPIHVGY 275 (331)
T ss_pred cCCHHHHHHHHHhCCEEEECCccccCChHHHHHHHcCCCEEEeCCCCchhhccCCCceEEe-eecccccccccCCccccc
Confidence 366443 78888883332332 2 468999999999999977543 3211 11111 00 23455
Q ss_pred EecCCCCHHHHHHHHHHHhcCC
Q 022321 228 EVNHDVKRGDIEALVKEMMEGD 249 (299)
Q Consensus 228 ~l~~~~~~~~l~~av~~ll~~~ 249 (299)
.+. .+.+++.+++.+++.|.
T Consensus 276 ~v~--~~~~~~~~~ii~~l~~~ 295 (331)
T PHA01630 276 FLD--PDIEDAYQKLLEALANW 295 (331)
T ss_pred ccC--CCHHHHHHHHHHHHhCC
Confidence 443 36778888888888763
No 124
>COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane]
Probab=94.34 E-value=1.3 Score=41.28 Aligned_cols=217 Identities=13% Similarity=0.071 Sum_probs=111.2
Q ss_pred CccEEEEcCcccccHHHHHHHHhcCCCEEEeC-cccCCcccccccccccCCCCCcccchhhhHhhccCCCCceEEEeecC
Q 022321 35 RSSAIIFNTFDEFEHAALEVIASKFPNIYTVG-PLPLLCKQVDETKFRSFGSSLWKEDTDCLKWLDKRDANSVVYVNYGS 113 (299)
Q Consensus 35 ~~~~~l~ns~~~LE~~~~~~~r~~~p~v~~VG-pl~~~~~~~~~~~~~~l~~~~~~~~~~~~~wl~~~~~~~vVyvsfGS 113 (299)
-+|.+|. +.-+|.++++ ...-++.||| |+...-+- ........+-+....++.++.+--||
T Consensus 136 ~~D~lLa--ilPFE~~~y~---k~g~~~~yVGHpl~d~i~~-------------~~~r~~ar~~l~~~~~~~~lalLPGS 197 (381)
T COG0763 136 YVDHLLA--ILPFEPAFYD---KFGLPCTYVGHPLADEIPL-------------LPDREAAREKLGIDADEKTLALLPGS 197 (381)
T ss_pred HhhHeee--ecCCCHHHHH---hcCCCeEEeCChhhhhccc-------------cccHHHHHHHhCCCCCCCeEEEecCC
Confidence 3455543 4557887654 3332489999 45422110 00111233334444467899999999
Q ss_pred CcccCH---HHHHHHHHHHHc--CCCCEEEEEcCCCCCCCCcCCChhhh-hhhcCCe-EEEeec-ch--hhhhcCCCcce
Q 022321 114 VTVMSE---QHLTEFAWGLAN--SKRPFLWILRPDVVMGDSVVLPDEYF-EEIKDRG-LIVSWC-NQ--EQVLLHPSVGA 183 (299)
Q Consensus 114 ~~~~~~---~~~~~l~~al~~--~~~~~iw~~~~~~~~~~~~~l~~~~~-~~~~~n~-~v~~~~-pq--~~iL~~~~v~~ 183 (299)
-.+--. ..+...++.|.. .+.+|+.-+..... +... +....+. ...-++ ++ ..++..+++
T Consensus 198 R~sEI~rl~~~f~~a~~~l~~~~~~~~~vlp~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~aD~-- 267 (381)
T COG0763 198 RRSEIRRLLPPFVQAAQELKARYPDLKFVLPLVNAKY--------RRIIEEALKWEVAGLSLILIDGEKRKAFAAADA-- 267 (381)
T ss_pred cHHHHHHHHHHHHHHHHHHHhhCCCceEEEecCcHHH--------HHHHHHHhhccccCceEEecCchHHHHHHHhhH--
Confidence 743212 223333444442 35677765543210 1111 1111111 111222 22 237777777
Q ss_pred EeeccCcchhhhhHhcCCcEEeccCcC-CHHHHHHHHHHHhCc--------eEEecC-----CCCHHHHHHHHHHHhcCC
Q 022321 184 FLTHCGWNSTMESICGGVPVICWPFFA-EQQTNCRYACTTWGI--------GMEVNH-----DVKRGDIEALVKEMMEGD 249 (299)
Q Consensus 184 fItHgG~~s~~Eal~~GvP~i~~P~~~-DQ~~na~~v~~~~g~--------G~~l~~-----~~~~~~l~~av~~ll~~~ 249 (299)
.+.-+|. -++|+..+|+|||+.=-.. =-+.-+++. ..... |..+-+ +++++.|.+++..++.|+
T Consensus 268 al~aSGT-~tLE~aL~g~P~Vv~Yk~~~it~~iak~l-vk~~yisLpNIi~~~~ivPEliq~~~~pe~la~~l~~ll~~~ 345 (381)
T COG0763 268 ALAASGT-ATLEAALAGTPMVVAYKVKPITYFIAKRL-VKLPYVSLPNILAGREIVPELIQEDCTPENLARALEELLLNG 345 (381)
T ss_pred HHHhccH-HHHHHHHhCCCEEEEEeccHHHHHHHHHh-ccCCcccchHHhcCCccchHHHhhhcCHHHHHHHHHHHhcCh
Confidence 7777765 4689999999998753211 112234443 22111 111111 589999999999999987
Q ss_pred -hhHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHH
Q 022321 250 -EGKKMRQKAWEWKKKAEAATAVGGQSYNNFDRLVKM 285 (299)
Q Consensus 250 -~~~~~r~~a~~l~~~~~~a~~~gg~s~~~l~~~v~~ 285 (299)
+.+.+++...++++.++ .++++......+++.
T Consensus 346 ~~~~~~~~~~~~l~~~l~----~~~~~e~aA~~vl~~ 378 (381)
T COG0763 346 DRREALKEKFRELHQYLR----EDPASEIAAQAVLEL 378 (381)
T ss_pred HhHHHHHHHHHHHHHHHc----CCcHHHHHHHHHHHH
Confidence 33466666666666653 444555544444443
No 125
>PLN02501 digalactosyldiacylglycerol synthase
Probab=93.72 E-value=5.3 Score=40.61 Aligned_cols=76 Identities=17% Similarity=0.134 Sum_probs=52.2
Q ss_pred CeEEEeecchh-hhhcCCCcceEeec---cC-cchhhhhHhcCCcEEeccCcCCHHHHHHHHHHHhCceEEecCCCCHHH
Q 022321 163 RGLIVSWCNQE-QVLLHPSVGAFLTH---CG-WNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVKRGD 237 (299)
Q Consensus 163 n~~v~~~~pq~-~iL~~~~v~~fItH---gG-~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~ 237 (299)
++.+.++.+.. .+++..++ ||.= =| -++++||+++|+|+|+.-.-+... + ...+.|. +. -+.++
T Consensus 602 ~V~FLG~~dd~~~lyasaDV--FVlPS~sEgFGlVlLEAMA~GlPVVATd~pG~e~-----V-~~g~nGl-l~--~D~Ea 670 (794)
T PLN02501 602 NLNFLKGRDHADDSLHGYKV--FINPSISDVLCTATAEALAMGKFVVCADHPSNEF-----F-RSFPNCL-TY--KTSED 670 (794)
T ss_pred EEEecCCCCCHHHHHHhCCE--EEECCCcccchHHHHHHHHcCCCEEEecCCCCce-----E-eecCCeE-ec--CCHHH
Confidence 34555666654 48888888 7642 22 468999999999999987754321 2 2223333 32 37899
Q ss_pred HHHHHHHHhcCC
Q 022321 238 IEALVKEMMEGD 249 (299)
Q Consensus 238 l~~av~~ll~~~ 249 (299)
+.++|.++|.++
T Consensus 671 fAeAI~~LLsd~ 682 (794)
T PLN02501 671 FVAKVKEALANE 682 (794)
T ss_pred HHHHHHHHHhCc
Confidence 999999999887
No 126
>TIGR02919 accessory Sec system glycosyltransferase GtfB. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus.
Probab=93.51 E-value=4.2 Score=39.08 Aligned_cols=189 Identities=11% Similarity=0.089 Sum_probs=109.4
Q ss_pred HHHHHHHHHhhccCccEEEEcCcccccHHHHHHHHhcCC-----CEEEeCcccCCcccccccccccCCCCCcccchhhhH
Q 022321 22 MFDFMGSEAQNCFRSSAIIFNTFDEFEHAALEVIASKFP-----NIYTVGPLPLLCKQVDETKFRSFGSSLWKEDTDCLK 96 (299)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~l~ns~~~LE~~~~~~~r~~~p-----~v~~VGpl~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 96 (299)
+-..+.-.+....+.+.+++.|- .-.+-++..++ .+.++|=+...+
T Consensus 226 l~~ny~~~l~~~~~~~~iIv~T~-----~q~~di~~r~~~~~~~~~ip~g~i~~~~------------------------ 276 (438)
T TIGR02919 226 IPGNMKLLLDNETRNKKIIIPNK-----NEYEKIKELLDNEYQEQISQLGYLYPFK------------------------ 276 (438)
T ss_pred CchHHHHHhcCccccCeEEeCCH-----HHHHHHHHHhCcccCceEEEEEEEEeec------------------------
Confidence 44444445555678899999993 22222232232 456677663210
Q ss_pred hhccCCCCceEEEeecCCcccCHHHHHHHHHHHHc-CCCCEEEEEcCCCCCCCCcCCChhhhhhhcCCeEEE-eecc-h-
Q 022321 97 WLDKRDANSVVYVNYGSVTVMSEQHLTEFAWGLAN-SKRPFLWILRPDVVMGDSVVLPDEYFEEIKDRGLIV-SWCN-Q- 172 (299)
Q Consensus 97 wl~~~~~~~vVyvsfGS~~~~~~~~~~~l~~al~~-~~~~~iw~~~~~~~~~~~~~l~~~~~~~~~~n~~v~-~~~p-q- 172 (299)
.+.+..+.+++++ +.+.++.+....++ +++.|-....... ...+ ..+ ++. +|+.+. ++.+ .
T Consensus 277 -~~~r~~~~~l~~t-------~s~~I~~i~~Lv~~lPd~~f~Iga~te~----s~kL-~~L-~~y-~nvvly~~~~~~~l 341 (438)
T TIGR02919 277 -KDNKYRKQALILT-------NSDQIEHLEEIVQALPDYHFHIAALTEM----SSKL-MSL-DKY-DNVKLYPNITTQKI 341 (438)
T ss_pred -cccCCcccEEEEC-------CHHHHHHHHHHHHhCCCcEEEEEecCcc----cHHH-HHH-Hhc-CCcEEECCcChHHH
Confidence 1122245577766 25555555555555 3555544333210 0011 122 333 566654 6677 3
Q ss_pred hhhhcCCCcceEeeccC--cchhhhhHhcCCcEEeccCcCCHHHHHHHHHHHhCceEEecCCCCHHHHHHHHHHHhcCCh
Q 022321 173 EQVLLHPSVGAFLTHCG--WNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVKRGDIEALVKEMMEGDE 250 (299)
Q Consensus 173 ~~iL~~~~v~~fItHgG--~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~l~~av~~ll~~~~ 250 (299)
..++..+++-+-|+|+. ..++.||+.+|+|+++.=..... ...+ .. |..+. .-+.+++.++|.++|.+++
T Consensus 342 ~~ly~~~dlyLdin~~e~~~~al~eA~~~G~pI~afd~t~~~---~~~i-~~---g~l~~-~~~~~~m~~~i~~lL~d~~ 413 (438)
T TIGR02919 342 QELYQTCDIYLDINHGNEILNAVRRAFEYNLLILGFEETAHN---RDFI-AS---ENIFE-HNEVDQLISKLKDLLNDPN 413 (438)
T ss_pred HHHHHhccEEEEccccccHHHHHHHHHHcCCcEEEEecccCC---cccc-cC---Cceec-CCCHHHHHHHHHHHhcCHH
Confidence 35999999988899987 58999999999999987653221 1222 22 44333 4578999999999998873
Q ss_pred hHHHHHHHHHHHHH
Q 022321 251 GKKMRQKAWEWKKK 264 (299)
Q Consensus 251 ~~~~r~~a~~l~~~ 264 (299)
.++++..+-++.
T Consensus 414 --~~~~~~~~q~~~ 425 (438)
T TIGR02919 414 --QFRELLEQQREH 425 (438)
T ss_pred --HHHHHHHHHHHH
Confidence 455555544444
No 127
>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins. The function of this family is unknown.
Probab=92.70 E-value=1.3 Score=40.47 Aligned_cols=58 Identities=12% Similarity=0.042 Sum_probs=41.5
Q ss_pred chhhhhcCCCcceEeeccC-cchhhhhHhcCCcEEeccCcCCHHH---HHHHHHHHhCceEEecC
Q 022321 171 NQEQVLLHPSVGAFLTHCG-WNSTMESICGGVPVICWPFFAEQQT---NCRYACTTWGIGMEVNH 231 (299)
Q Consensus 171 pq~~iL~~~~v~~fItHgG-~~s~~Eal~~GvP~i~~P~~~DQ~~---na~~v~~~~g~G~~l~~ 231 (299)
|...+|+.++. |+.-+. .+.+.||+..|+|+.++|+-.-... ..+.+ ++.|.-..+..
T Consensus 221 Py~~~La~ad~--i~VT~DSvSMvsEA~~tG~pV~v~~l~~~~~r~~r~~~~L-~~~g~~r~~~~ 282 (311)
T PF06258_consen 221 PYLGFLAAADA--IVVTEDSVSMVSEAAATGKPVYVLPLPGRSGRFRRFHQSL-EERGAVRPFTG 282 (311)
T ss_pred cHHHHHHhCCE--EEEcCccHHHHHHHHHcCCCEEEecCCCcchHHHHHHHHH-HHCCCEEECCC
Confidence 67789999887 665555 6889999999999999998651111 23345 56677666654
No 128
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=92.39 E-value=0.84 Score=38.01 Aligned_cols=48 Identities=23% Similarity=0.249 Sum_probs=36.0
Q ss_pred cCCeEEEeecch-h--h-hhcCCCcceEeeccC----cchhhhhHhcCCcEEeccCcC
Q 022321 161 KDRGLIVSWCNQ-E--Q-VLLHPSVGAFLTHCG----WNSTMESICGGVPVICWPFFA 210 (299)
Q Consensus 161 ~~n~~v~~~~pq-~--~-iL~~~~v~~fItHgG----~~s~~Eal~~GvP~i~~P~~~ 210 (299)
.+|+.+.++++. . . ++..+++ +|+-.. .+++.||+++|+|+|+.+...
T Consensus 160 ~~~v~~~~~~~~~~~~~~~~~~~di--~l~~~~~e~~~~~~~Eam~~g~pvi~s~~~~ 215 (229)
T cd01635 160 LDRVIFLGGLDPEELLALLLAAADV--FVLPSLREGFGLVVLEAMACGLPVIATDVGG 215 (229)
T ss_pred cccEEEeCCCCcHHHHHHHhhcCCE--EEecccccCcChHHHHHHhCCCCEEEcCCCC
Confidence 578888888632 2 2 4444777 776665 689999999999999988754
No 129
>PLN02316 synthase/transferase
Probab=92.21 E-value=11 Score=40.13 Aligned_cols=114 Identities=4% Similarity=-0.055 Sum_probs=67.7
Q ss_pred cCCeEEEeecchh---hhhcCCCcceEeec----cCcchhhhhHhcCCcEEeccCcC--CHHHH-------HHHHHHHhC
Q 022321 161 KDRGLIVSWCNQE---QVLLHPSVGAFLTH----CGWNSTMESICGGVPVICWPFFA--EQQTN-------CRYACTTWG 224 (299)
Q Consensus 161 ~~n~~v~~~~pq~---~iL~~~~v~~fItH----gG~~s~~Eal~~GvP~i~~P~~~--DQ~~n-------a~~v~~~~g 224 (299)
++++.+....+.. .+++.+++ |+.- +=-.+.+||+.+|+|.|+....+ |.-.. ++.. ..-+
T Consensus 899 ~~rV~f~g~~de~lah~iyaaADi--flmPS~~EP~GLvqLEAMa~GtppVvs~vGGL~DtV~d~d~~~~~~~~~-g~~~ 975 (1036)
T PLN02316 899 HDRARLCLTYDEPLSHLIYAGADF--ILVPSIFEPCGLTQLTAMRYGSIPVVRKTGGLFDTVFDVDHDKERAQAQ-GLEP 975 (1036)
T ss_pred CCeEEEEecCCHHHHHHHHHhCcE--EEeCCcccCccHHHHHHHHcCCCeEEEcCCCcHhhcccccccccccccc-ccCC
Confidence 4566665444543 58888888 7742 22358999999999888765532 22111 1100 1125
Q ss_pred ceEEecCCCCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHH
Q 022321 225 IGMEVNHDVKRGDIEALVKEMMEGDEGKKMRQKAWEWKKKAEAATAVGGQSYNNFDRLV 283 (299)
Q Consensus 225 ~G~~l~~~~~~~~l~~av~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gg~s~~~l~~~v 283 (299)
.|..+. ..+++.+..+|.+++.+ |......+++..+.++...-+-.....+.+
T Consensus 976 tGflf~-~~d~~aLa~AL~raL~~-----~~~~~~~~~~~~r~~m~~dFSW~~~A~~Y~ 1028 (1036)
T PLN02316 976 NGFSFD-GADAAGVDYALNRAISA-----WYDGRDWFNSLCKRVMEQDWSWNRPALDYM 1028 (1036)
T ss_pred ceEEeC-CCCHHHHHHHHHHHHhh-----hhhhHHHHHHHHHHHHHhhCCHHHHHHHHH
Confidence 677776 56889999999999874 333344455555555555555444444433
No 130
>PLN02846 digalactosyldiacylglycerol synthase
Probab=92.12 E-value=3.2 Score=40.13 Aligned_cols=73 Identities=12% Similarity=0.136 Sum_probs=52.3
Q ss_pred EEeecchhhhhcCCCcceEeecc----CcchhhhhHhcCCcEEeccCcCCHHHHHHHHHHHhCceEEecCCCCHHHHHHH
Q 022321 166 IVSWCNQEQVLLHPSVGAFLTHC----GWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVKRGDIEAL 241 (299)
Q Consensus 166 v~~~~pq~~iL~~~~v~~fItHg----G~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~l~~a 241 (299)
+.++.+..+++...++ ||.=+ =-++++||+++|+|+|+.-.-. | ..+ .+-+.|.... +.+++.++
T Consensus 288 f~G~~~~~~~~~~~Dv--Fv~pS~~Et~g~v~lEAmA~G~PVVa~~~~~----~-~~v-~~~~ng~~~~---~~~~~a~a 356 (462)
T PLN02846 288 YPGRDHADPLFHDYKV--FLNPSTTDVVCTTTAEALAMGKIVVCANHPS----N-EFF-KQFPNCRTYD---DGKGFVRA 356 (462)
T ss_pred ECCCCCHHHHHHhCCE--EEECCCcccchHHHHHHHHcCCcEEEecCCC----c-cee-ecCCceEecC---CHHHHHHH
Confidence 3455566678888887 87653 3478999999999999986543 2 333 4445555443 78899999
Q ss_pred HHHHhcCC
Q 022321 242 VKEMMEGD 249 (299)
Q Consensus 242 v~~ll~~~ 249 (299)
+.++|.++
T Consensus 357 i~~~l~~~ 364 (462)
T PLN02846 357 TLKALAEE 364 (462)
T ss_pred HHHHHccC
Confidence 99999865
No 131
>PLN02939 transferase, transferring glycosyl groups
Probab=92.12 E-value=7.8 Score=40.70 Aligned_cols=84 Identities=6% Similarity=-0.006 Sum_probs=55.0
Q ss_pred cCCeEEEeecchh---hhhcCCCcceEeec----cCcchhhhhHhcCCcEEeccCcC--CHHHH--HHHHHHHhCceEEe
Q 022321 161 KDRGLIVSWCNQE---QVLLHPSVGAFLTH----CGWNSTMESICGGVPVICWPFFA--EQQTN--CRYACTTWGIGMEV 229 (299)
Q Consensus 161 ~~n~~v~~~~pq~---~iL~~~~v~~fItH----gG~~s~~Eal~~GvP~i~~P~~~--DQ~~n--a~~v~~~~g~G~~l 229 (299)
.+++.+..+.+.. .+++.+++ ||.- +--.+++||+.+|+|.|+....+ |--.+ ...+.+.-+.|..+
T Consensus 836 ~drV~FlG~~de~lah~IYAaADI--FLmPSr~EPfGLvqLEAMAyGtPPVVs~vGGL~DtV~d~d~e~i~~eg~NGfLf 913 (977)
T PLN02939 836 NNNIRLILKYDEALSHSIYAASDM--FIIPSMFEPCGLTQMIAMRYGSVPIVRKTGGLNDSVFDFDDETIPVELRNGFTF 913 (977)
T ss_pred CCeEEEEeccCHHHHHHHHHhCCE--EEECCCccCCcHHHHHHHHCCCCEEEecCCCCcceeecCCccccccCCCceEEe
Confidence 3568887877754 48888888 7742 12357999999999999876643 22111 11110223567776
Q ss_pred cCCCCHHHHHHHHHHHhc
Q 022321 230 NHDVKRGDIEALVKEMME 247 (299)
Q Consensus 230 ~~~~~~~~l~~av~~ll~ 247 (299)
. ..+.+.+..+|.+++.
T Consensus 914 ~-~~D~eaLa~AL~rAL~ 930 (977)
T PLN02939 914 L-TPDEQGLNSALERAFN 930 (977)
T ss_pred c-CCCHHHHHHHHHHHHH
Confidence 5 3588889999988775
No 132
>TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I. This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=91.65 E-value=1.3 Score=40.19 Aligned_cols=138 Identities=10% Similarity=0.078 Sum_probs=78.5
Q ss_pred HhhccCCCCceEEEeecCC---cccCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCcCCChhhhhhhcCCeEEEee--c
Q 022321 96 KWLDKRDANSVVYVNYGSV---TVMSEQHLTEFAWGLANSKRPFLWILRPDVVMGDSVVLPDEYFEEIKDRGLIVSW--C 170 (299)
Q Consensus 96 ~wl~~~~~~~vVyvsfGS~---~~~~~~~~~~l~~al~~~~~~~iw~~~~~~~~~~~~~l~~~~~~~~~~n~~v~~~--~ 170 (299)
.++....+++.|.+.-|+. ...+.+.+.++++.|.+.++++++..+... +......+.+..+.. .+.+- +
T Consensus 171 ~~~~~~~~~~~i~i~~gas~~~K~wp~e~~~~l~~~l~~~~~~~vl~~g~~~----e~~~~~~i~~~~~~~-~l~g~~sL 245 (319)
T TIGR02193 171 AFLGHALPAPYAVLLHATSRDDKTWPEERWRELARLLLARGLQIVLPWGNDA----EKQRAERIAEALPGA-VVLPKMSL 245 (319)
T ss_pred hhhhccCCCCEEEEEeCCCcccCCCCHHHHHHHHHHHHHCCCeEEEeCCCHH----HHHHHHHHHhhCCCC-eecCCCCH
Confidence 3444333456666666653 457888999999999776888776645321 000111222222322 33332 3
Q ss_pred ch-hhhhcCCCcceEeeccCcchhhhhHhcCCcEEeccCcCCHHHHHHHHHHHhCceE-EecC----CCCHHHHHHHHHH
Q 022321 171 NQ-EQVLLHPSVGAFLTHCGWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGM-EVNH----DVKRGDIEALVKE 244 (299)
Q Consensus 171 pq-~~iL~~~~v~~fItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~-~l~~----~~~~~~l~~av~~ 244 (299)
++ ..+++++++ ||+. -.|-++=|.+.|+|+|++ ++ +.+..+. .=+|-.. .+.. .++++++.+++++
T Consensus 246 ~el~ali~~a~l--~I~~-DSgp~HlAaa~g~P~i~l--fg--~t~p~~~-~P~~~~~~~~~~~~~~~I~~~~V~~ai~~ 317 (319)
T TIGR02193 246 AEVAALLAGADA--VVGV-DTGLTHLAAALDKPTVTL--YG--ATDPGRT-GGYGKPNVALLGESGANPTPDEVLAALEE 317 (319)
T ss_pred HHHHHHHHcCCE--EEeC-CChHHHHHHHcCCCEEEE--EC--CCCHhhc-ccCCCCceEEccCccCCCCHHHHHHHHHh
Confidence 33 358888988 9986 567888889999999985 22 0111111 1112111 1111 6899999999987
Q ss_pred Hh
Q 022321 245 MM 246 (299)
Q Consensus 245 ll 246 (299)
+|
T Consensus 318 ~~ 319 (319)
T TIGR02193 318 LL 319 (319)
T ss_pred hC
Confidence 64
No 133
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
Probab=90.60 E-value=4.6 Score=39.01 Aligned_cols=103 Identities=11% Similarity=0.042 Sum_probs=65.9
Q ss_pred eecchhh---hhcCCCcceEee---ccCc-chhhhhHhcCCc----EEeccCcCCHHHHHHHHHHHhCceEEecCCCCHH
Q 022321 168 SWCNQEQ---VLLHPSVGAFLT---HCGW-NSTMESICGGVP----VICWPFFAEQQTNCRYACTTWGIGMEVNHDVKRG 236 (299)
Q Consensus 168 ~~~pq~~---iL~~~~v~~fIt---HgG~-~s~~Eal~~GvP----~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~ 236 (299)
..+++.+ +++.+++ |+. +=|+ .++.||+++|+| +|+--+.+- +..+ +-|+.++ ..+.+
T Consensus 342 ~~~~~~el~aly~aaDv--~vv~S~~EG~~Lv~lEamA~g~P~~g~vVlS~~~G~----~~~l----~~gllVn-P~d~~ 410 (456)
T TIGR02400 342 RSYDREELMALYRAADV--GLVTPLRDGMNLVAKEYVAAQDPKDGVLILSEFAGA----AQEL----NGALLVN-PYDID 410 (456)
T ss_pred CCCCHHHHHHHHHhCcE--EEECccccccCccHHHHHHhcCCCCceEEEeCCCCC----hHHh----CCcEEEC-CCCHH
Confidence 4556654 6788888 764 3364 588899999999 666655432 1222 3577776 46899
Q ss_pred HHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHH
Q 022321 237 DIEALVKEMMEGDEGKKMRQKAWEWKKKAEAATAVGGQSYNNFDRLVKMVL 287 (299)
Q Consensus 237 ~l~~av~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gg~s~~~l~~~v~~l~ 287 (299)
++.++|.++++.+.. +.+++.+++++.+. ..+...=..+|++.|.
T Consensus 411 ~lA~aI~~aL~~~~~-er~~r~~~~~~~v~-----~~~~~~W~~~~l~~l~ 455 (456)
T TIGR02400 411 GMADAIARALTMPLE-EREERHRAMMDKLR-----KNDVQRWREDFLSDLN 455 (456)
T ss_pred HHHHHHHHHHcCCHH-HHHHHHHHHHHHHh-----hCCHHHHHHHHHHHhh
Confidence 999999999986522 44555555555543 2355454566666553
No 134
>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]
Probab=89.02 E-value=5.8 Score=37.15 Aligned_cols=87 Identities=16% Similarity=0.208 Sum_probs=66.5
Q ss_pred CCeEEE---eecchhhhhcCCCcceEeeccCcchhhhhHhcCCcEEeccCcCCHHHHHHHHHHHhCceEEecCCCCHHHH
Q 022321 162 DRGLIV---SWCNQEQVLLHPSVGAFLTHCGWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVKRGDI 238 (299)
Q Consensus 162 ~n~~v~---~~~pq~~iL~~~~v~~fItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~l 238 (299)
.|+.+. +|.+...++.++-+ ++|-.|. -.-||-..|+|.+++=...+++. . .+.|.-+.+. .+.+.|
T Consensus 262 ~~v~li~pl~~~~f~~L~~~a~~--iltDSGg-iqEEAp~lg~Pvl~lR~~TERPE---~--v~agt~~lvg--~~~~~i 331 (383)
T COG0381 262 ERVKLIDPLGYLDFHNLMKNAFL--ILTDSGG-IQEEAPSLGKPVLVLRDTTERPE---G--VEAGTNILVG--TDEENI 331 (383)
T ss_pred CcEEEeCCcchHHHHHHHHhceE--EEecCCc-hhhhHHhcCCcEEeeccCCCCcc---c--eecCceEEeC--ccHHHH
Confidence 346654 67788889999987 9998764 46789999999999999999987 2 3456666664 688999
Q ss_pred HHHHHHHhcCChhHHHHHHHHHH
Q 022321 239 EALVKEMMEGDEGKKMRQKAWEW 261 (299)
Q Consensus 239 ~~av~~ll~~~~~~~~r~~a~~l 261 (299)
.+++.++++++ +..++.+..
T Consensus 332 ~~~~~~ll~~~---~~~~~m~~~ 351 (383)
T COG0381 332 LDAATELLEDE---EFYERMSNA 351 (383)
T ss_pred HHHHHHHhhCh---HHHHHHhcc
Confidence 99999999987 555554433
No 135
>PRK10125 putative glycosyl transferase; Provisional
Probab=88.77 E-value=16 Score=34.52 Aligned_cols=99 Identities=12% Similarity=-0.040 Sum_probs=58.9
Q ss_pred HHHHHHHHHcCCCCE-EEEEcCCCCCCCCcCCChhhhhhhcCCeEEEeecc-h---hhhhcCCCcceEeec----cCcch
Q 022321 122 LTEFAWGLANSKRPF-LWILRPDVVMGDSVVLPDEYFEEIKDRGLIVSWCN-Q---EQVLLHPSVGAFLTH----CGWNS 192 (299)
Q Consensus 122 ~~~l~~al~~~~~~~-iw~~~~~~~~~~~~~l~~~~~~~~~~n~~v~~~~p-q---~~iL~~~~v~~fItH----gG~~s 192 (299)
...+++++...+..+ ++.++... .. ...++...++.. + ..+++.+++ ||.- |--++
T Consensus 258 ~~~li~A~~~l~~~~~L~ivG~g~---------~~----~~~~v~~~g~~~~~~~l~~~y~~aDv--fV~pS~~Egfp~v 322 (405)
T PRK10125 258 DQQLVREMMALGDKIELHTFGKFS---------PF----TAGNVVNHGFETDKRKLMSALNQMDA--LVFSSRVDNYPLI 322 (405)
T ss_pred HHHHHHHHHhCCCCeEEEEEcCCC---------cc----cccceEEecCcCCHHHHHHHHHhCCE--EEECCccccCcCH
Confidence 466788887754333 44455320 00 123455455542 2 346767777 6643 23468
Q ss_pred hhhhHhcCCcEEeccCcCCHHHHHHHHHHHhCceEEecCCCCHHHHHHHH
Q 022321 193 TMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVKRGDIEALV 242 (299)
Q Consensus 193 ~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~l~~av 242 (299)
++||+++|+|+|+....+ ....+ .. +.|+.+.. -+.+++.+++
T Consensus 323 ilEAmA~G~PVVat~~gG----~~Eiv-~~-~~G~lv~~-~d~~~La~~~ 365 (405)
T PRK10125 323 LCEALSIGVPVIATHSDA----AREVL-QK-SGGKTVSE-EEVLQLAQLS 365 (405)
T ss_pred HHHHHHcCCCEEEeCCCC----hHHhE-eC-CcEEEECC-CCHHHHHhcc
Confidence 999999999999998864 22233 33 57887763 4667777643
No 136
>PLN00142 sucrose synthase
Probab=85.52 E-value=5.8 Score=41.00 Aligned_cols=57 Identities=9% Similarity=0.155 Sum_probs=39.7
Q ss_pred Eeec---cCc-chhhhhHhcCCcEEeccCcCCHHHHHHHHHHHhCceEEecCCCCHHHHHHHHHHHh
Q 022321 184 FLTH---CGW-NSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVKRGDIEALVKEMM 246 (299)
Q Consensus 184 fItH---gG~-~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~l~~av~~ll 246 (299)
||.= =|. .+++||+++|+|+|+....+ ....+ +.-..|..++. -+.+++.++|.+++
T Consensus 670 fVlPS~~EgFGLvvLEAMA~GlPVVATdvGG----~~EIV-~dG~tG~LV~P-~D~eaLA~aI~~lL 730 (815)
T PLN00142 670 FVQPALYEAFGLTVVEAMTCGLPTFATCQGG----PAEII-VDGVSGFHIDP-YHGDEAANKIADFF 730 (815)
T ss_pred EEeCCcccCCCHHHHHHHHcCCCEEEcCCCC----HHHHh-cCCCcEEEeCC-CCHHHHHHHHHHHH
Confidence 6642 344 48999999999999976533 44445 55457888763 57788888887654
No 137
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.
Probab=85.35 E-value=7.7 Score=37.43 Aligned_cols=73 Identities=14% Similarity=0.083 Sum_probs=48.6
Q ss_pred EEeecchhh---hhcCCCcceEee---ccCc-chhhhhHhcCCc----EEeccCcCCHHHHHHHHHHHhCceEEecCCCC
Q 022321 166 IVSWCNQEQ---VLLHPSVGAFLT---HCGW-NSTMESICGGVP----VICWPFFAEQQTNCRYACTTWGIGMEVNHDVK 234 (299)
Q Consensus 166 v~~~~pq~~---iL~~~~v~~fIt---HgG~-~s~~Eal~~GvP----~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~ 234 (299)
+.+++++.+ +++.+++ ||. +-|+ .+++||+++|+| +|+--..+- . +...-|+.++ ..+
T Consensus 345 ~~g~v~~~el~~~y~~aDv--~v~pS~~Eg~~lv~lEAma~g~p~~g~vV~S~~~G~-------~-~~~~~g~lv~-p~d 413 (460)
T cd03788 345 LYRSLPREELAALYRAADV--ALVTPLRDGMNLVAKEYVACQDDDPGVLILSEFAGA-------A-EELSGALLVN-PYD 413 (460)
T ss_pred EeCCCCHHHHHHHHHhccE--EEeCccccccCcccceeEEEecCCCceEEEeccccc-------h-hhcCCCEEEC-CCC
Confidence 346667654 6888888 663 3454 577999999999 554433211 1 1123466665 468
Q ss_pred HHHHHHHHHHHhcCC
Q 022321 235 RGDIEALVKEMMEGD 249 (299)
Q Consensus 235 ~~~l~~av~~ll~~~ 249 (299)
.+++.++|.++++++
T Consensus 414 ~~~la~ai~~~l~~~ 428 (460)
T cd03788 414 IDEVADAIHRALTMP 428 (460)
T ss_pred HHHHHHHHHHHHcCC
Confidence 899999999999876
No 138
>cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS). Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=84.25 E-value=3.5 Score=36.61 Aligned_cols=95 Identities=14% Similarity=0.133 Sum_probs=59.5
Q ss_pred CceEEEeecCC---cccCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCcCCChhhhhhh-cCCeE-EEee--cc-hhhh
Q 022321 104 NSVVYVNYGSV---TVMSEQHLTEFAWGLANSKRPFLWILRPDVVMGDSVVLPDEYFEEI-KDRGL-IVSW--CN-QEQV 175 (299)
Q Consensus 104 ~~vVyvsfGS~---~~~~~~~~~~l~~al~~~~~~~iw~~~~~~~~~~~~~l~~~~~~~~-~~n~~-v~~~--~p-q~~i 175 (299)
++.|.+..|+. ...+.+.+.++++.|.+.++++++..+++. ......+.+.. ..++. +.+- +. ...+
T Consensus 121 ~~~i~i~~~~~~~~k~w~~~~~~~l~~~l~~~~~~ivl~g~~~e-----~~~~~~i~~~~~~~~~~~~~~~~~l~e~~~l 195 (279)
T cd03789 121 KPVVVLPPGASGPAKRWPAERFAALADRLLARGARVVLTGGPAE-----RELAEEIAAALGGPRVVNLAGKTSLRELAAL 195 (279)
T ss_pred CCEEEECCCCCCccccCCHHHHHHHHHHHHHCCCEEEEEechhh-----HHHHHHHHHhcCCCccccCcCCCCHHHHHHH
Confidence 46677777765 457788999999999877888887654321 00111122222 12222 2222 12 2458
Q ss_pred hcCCCcceEeeccCcchhhhhHhcCCcEEec
Q 022321 176 LLHPSVGAFLTHCGWNSTMESICGGVPVICW 206 (299)
Q Consensus 176 L~~~~v~~fItHgG~~s~~Eal~~GvP~i~~ 206 (299)
++++++ ||+.-. |.++=|.+.|+|++++
T Consensus 196 i~~~~l--~I~~Ds-g~~HlA~a~~~p~i~l 223 (279)
T cd03789 196 LARADL--VVTNDS-GPMHLAAALGTPTVAL 223 (279)
T ss_pred HHhCCE--EEeeCC-HHHHHHHHcCCCEEEE
Confidence 888888 999853 6777778999999886
No 139
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.
Probab=83.61 E-value=4.4 Score=40.16 Aligned_cols=76 Identities=14% Similarity=0.151 Sum_probs=47.5
Q ss_pred hhhhhcCCCcceEee-ccCc-chhhhhHhcCCcEEeccCcC-CHHHHHHHHHHHh-CceEEecC------CCCHHHHHHH
Q 022321 172 QEQVLLHPSVGAFLT-HCGW-NSTMESICGGVPVICWPFFA-EQQTNCRYACTTW-GIGMEVNH------DVKRGDIEAL 241 (299)
Q Consensus 172 q~~iL~~~~v~~fIt-HgG~-~s~~Eal~~GvP~i~~P~~~-DQ~~na~~v~~~~-g~G~~l~~------~~~~~~l~~a 241 (299)
..+++..+++.+|-| +=|+ .+++||+++|+|+|+....+ ..... ..+ ..- ..|+.+.. ..+.++|.++
T Consensus 468 y~E~~~g~dl~v~PS~yE~fG~~~lEAma~G~PvI~t~~~gf~~~v~-E~v-~~~~~~gi~V~~r~~~~~~e~v~~La~~ 545 (590)
T cd03793 468 YEEFVRGCHLGVFPSYYEPWGYTPAECTVMGIPSITTNLSGFGCFME-EHI-EDPESYGIYIVDRRFKSPDESVQQLTQY 545 (590)
T ss_pred hHHHhhhceEEEeccccCCCCcHHHHHHHcCCCEEEccCcchhhhhH-HHh-ccCCCceEEEecCCccchHHHHHHHHHH
Confidence 445666777744433 4454 58999999999999988743 22222 112 111 25777753 2467778888
Q ss_pred HHHHhcCC
Q 022321 242 VKEMMEGD 249 (299)
Q Consensus 242 v~~ll~~~ 249 (299)
+.++++.+
T Consensus 546 m~~~~~~~ 553 (590)
T cd03793 546 MYEFCQLS 553 (590)
T ss_pred HHHHhCCc
Confidence 88888554
No 140
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=83.00 E-value=7.9 Score=39.94 Aligned_cols=80 Identities=10% Similarity=0.118 Sum_probs=51.7
Q ss_pred cCCeEEEeec-ch---hhhhcC-CC-cceEeec---cC-cchhhhhHhcCCcEEeccCcCCHHHHHHHHHHHhCceEEec
Q 022321 161 KDRGLIVSWC-NQ---EQVLLH-PS-VGAFLTH---CG-WNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVN 230 (299)
Q Consensus 161 ~~n~~v~~~~-pq---~~iL~~-~~-v~~fItH---gG-~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~ 230 (299)
.+++.+.++. +. ..++.+ ++ .++||.= =| -.+++||+++|+|+|+.-..+ .+..+ +.-..|..++
T Consensus 618 ~g~V~flG~~~~~~~~~elyr~iAd~adVfV~PS~~EpFGLvvLEAMAcGlPVVAT~~GG----~~EiV-~dg~tGfLVd 692 (784)
T TIGR02470 618 HGQIRWIGAQLNRVRNGELYRYIADTKGIFVQPALYEAFGLTVLEAMTCGLPTFATRFGG----PLEII-QDGVSGFHID 692 (784)
T ss_pred CCeEEEccCcCCcccHHHHHHHhhccCcEEEECCcccCCCHHHHHHHHcCCCEEEcCCCC----HHHHh-cCCCcEEEeC
Confidence 4677776664 32 234442 21 1236632 22 358999999999999966543 44455 5556788887
Q ss_pred CCCCHHHHHHHHHHHh
Q 022321 231 HDVKRGDIEALVKEMM 246 (299)
Q Consensus 231 ~~~~~~~l~~av~~ll 246 (299)
.-+.+++.++|.+++
T Consensus 693 -p~D~eaLA~aL~~ll 707 (784)
T TIGR02470 693 -PYHGEEAAEKIVDFF 707 (784)
T ss_pred -CCCHHHHHHHHHHHH
Confidence 357889999999876
No 141
>PRK14099 glycogen synthase; Provisional
Probab=82.24 E-value=23 Score=34.40 Aligned_cols=86 Identities=6% Similarity=0.087 Sum_probs=47.8
Q ss_pred cCCe-EEEeecchhh-hh-cCCCcceEee---ccC-cchhhhhHhcCCcEEeccCcC--CHHHHHHHHHHH--hCceEEe
Q 022321 161 KDRG-LIVSWCNQEQ-VL-LHPSVGAFLT---HCG-WNSTMESICGGVPVICWPFFA--EQQTNCRYACTT--WGIGMEV 229 (299)
Q Consensus 161 ~~n~-~v~~~~pq~~-iL-~~~~v~~fIt---HgG-~~s~~Eal~~GvP~i~~P~~~--DQ~~na~~v~~~--~g~G~~l 229 (299)
++++ .+.+|-.... ++ +.+++ |+. +=| ..+.+||+++|+|.|+....+ |--.+.....+. -+.|+.+
T Consensus 349 ~~~v~~~~G~~~~l~~~~~a~aDi--fv~PS~~E~fGl~~lEAma~G~ppVvs~~GGl~d~V~~~~~~~~~~~~~~G~l~ 426 (485)
T PRK14099 349 PGQIGVVIGYDEALAHLIQAGADA--LLVPSRFEPCGLTQLCALRYGAVPVVARVGGLADTVVDANEMAIATGVATGVQF 426 (485)
T ss_pred CCCEEEEeCCCHHHHHHHHhcCCE--EEECCccCCCcHHHHHHHHCCCCcEEeCCCCccceeecccccccccCCCceEEe
Confidence 4555 3556633322 33 45666 764 233 347889999997666654322 221111000011 1568777
Q ss_pred cCCCCHHHHHHHHHH---HhcCC
Q 022321 230 NHDVKRGDIEALVKE---MMEGD 249 (299)
Q Consensus 230 ~~~~~~~~l~~av~~---ll~~~ 249 (299)
. .-+.+++.+++.+ +++|+
T Consensus 427 ~-~~d~~~La~ai~~a~~l~~d~ 448 (485)
T PRK14099 427 S-PVTADALAAALRKTAALFADP 448 (485)
T ss_pred C-CCCHHHHHHHHHHHHHHhcCH
Confidence 6 4688999999987 55554
No 142
>PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT. Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport
Probab=80.70 E-value=9.5 Score=33.76 Aligned_cols=43 Identities=21% Similarity=0.200 Sum_probs=33.9
Q ss_pred CeEEEeecchhhhhcCCCcceEeeccCcchhhhhHhcCCcEEeccC
Q 022321 163 RGLIVSWCNQEQVLLHPSVGAFLTHCGWNSTMESICGGVPVICWPF 208 (299)
Q Consensus 163 n~~v~~~~pq~~iL~~~~v~~fItHgG~~s~~Eal~~GvP~i~~P~ 208 (299)
.+.+.+-.+-.++|.+++. +||-.+ ..-+||+.+|+|++++..
T Consensus 184 ~~~~~~~~~~~~Ll~~s~~--VvtinS-tvGlEAll~gkpVi~~G~ 226 (269)
T PF05159_consen 184 VVIIDDDVNLYELLEQSDA--VVTINS-TVGLEALLHGKPVIVFGR 226 (269)
T ss_pred eEEECCCCCHHHHHHhCCE--EEEECC-HHHHHHHHcCCceEEecC
Confidence 3445566777889999998 888754 477899999999999765
No 143
>TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II. This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=76.98 E-value=14 Score=33.73 Aligned_cols=96 Identities=8% Similarity=0.029 Sum_probs=60.1
Q ss_pred CCceEEEeecCC----cccCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCcCCChhhhhhhcCCeE-EEee--cch-hh
Q 022321 103 ANSVVYVNYGSV----TVMSEQHLTEFAWGLANSKRPFLWILRPDVVMGDSVVLPDEYFEEIKDRGL-IVSW--CNQ-EQ 174 (299)
Q Consensus 103 ~~~vVyvsfGS~----~~~~~~~~~~l~~al~~~~~~~iw~~~~~~~~~~~~~l~~~~~~~~~~n~~-v~~~--~pq-~~ 174 (299)
+++.|.+.-|+. ...+.+.+.++++.|.+.+++++..-++.. ....+.+.+..+.++. +.+- +.+ ..
T Consensus 173 ~~~~i~i~pga~~~~~K~Wp~e~~~~li~~l~~~~~~ivl~G~~~e-----~~~~~~i~~~~~~~~~~l~g~~sL~el~a 247 (334)
T TIGR02195 173 ERPIIAFCPGAEFGPAKRWPHEHYAELAKRLIDQGYQVVLFGSAKD-----HPAGNEIEALLPGELRNLAGETSLDEAVD 247 (334)
T ss_pred CCCEEEEcCCCCCCccCCCCHHHHHHHHHHHHHCCCEEEEEEChhh-----HHHHHHHHHhCCcccccCCCCCCHHHHHH
Confidence 467788877763 347888999999999777777766533220 0111222222233322 2222 233 34
Q ss_pred hhcCCCcceEeeccCcchhhhhHhcCCcEEec
Q 022321 175 VLLHPSVGAFLTHCGWNSTMESICGGVPVICW 206 (299)
Q Consensus 175 iL~~~~v~~fItHgG~~s~~Eal~~GvP~i~~ 206 (299)
+++++++ ||+. -.|-++=|.+.|+|+|++
T Consensus 248 li~~a~l--~I~~-DSGp~HlAaA~~~P~i~l 276 (334)
T TIGR02195 248 LIALAKA--VVTN-DSGLMHVAAALNRPLVAL 276 (334)
T ss_pred HHHhCCE--EEee-CCHHHHHHHHcCCCEEEE
Confidence 8888888 9986 567788889999999875
No 144
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=76.20 E-value=15 Score=38.23 Aligned_cols=100 Identities=14% Similarity=0.119 Sum_probs=60.1
Q ss_pred hhhcCCCcceEee---ccCcc-hhhhhHhcCCc---EEeccCcCCHHHHHHHHHHHhC-ceEEecCCCCHHHHHHHHHHH
Q 022321 174 QVLLHPSVGAFLT---HCGWN-STMESICGGVP---VICWPFFAEQQTNCRYACTTWG-IGMEVNHDVKRGDIEALVKEM 245 (299)
Q Consensus 174 ~iL~~~~v~~fIt---HgG~~-s~~Eal~~GvP---~i~~P~~~DQ~~na~~v~~~~g-~G~~l~~~~~~~~l~~av~~l 245 (299)
.+++.+++ |+. +-|+| .++|++++|.| ++++.-++ ..+ +..| .|+.++ ..+.+++.++|.++
T Consensus 371 aly~~ADv--fvvtSlrEGmnLv~lEamA~g~p~~gvlVlSe~~---G~~----~~l~~~allVn-P~D~~~lA~AI~~a 440 (797)
T PLN03063 371 ALYAITDV--MLVTSLRDGMNLVSYEFVACQKAKKGVLVLSEFA---GAG----QSLGAGALLVN-PWNITEVSSAIKEA 440 (797)
T ss_pred HHHHhCCE--EEeCccccccCcchhhHheeecCCCCCEEeeCCc---Cch----hhhcCCeEEEC-CCCHHHHHHHHHHH
Confidence 47888888 764 34765 77899999999 33333221 111 1234 577776 47899999999999
Q ss_pred hcCChhHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhc
Q 022321 246 MEGDEGKKMRQKAWEWKKKAEAATAVGGQSYNNFDRLVKMVLHQ 289 (299)
Q Consensus 246 l~~~~~~~~r~~a~~l~~~~~~a~~~gg~s~~~l~~~v~~l~~~ 289 (299)
|+.+.. +.+++.+++.+.++ ..+...=...|++.+...
T Consensus 441 L~m~~~-er~~r~~~~~~~v~-----~~~~~~Wa~~fl~~l~~~ 478 (797)
T PLN03063 441 LNMSDE-ERETRHRHNFQYVK-----THSAQKWADDFMSELNDI 478 (797)
T ss_pred HhCCHH-HHHHHHHHHHHhhh-----hCCHHHHHHHHHHHHHHH
Confidence 984321 34444555555543 223334345566665443
No 145
>PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A.
Probab=75.82 E-value=8 Score=33.45 Aligned_cols=98 Identities=8% Similarity=0.104 Sum_probs=53.2
Q ss_pred CCceEEEeecCC---cccCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCcCCChhhhhhhcCC-eEEEee--cch-hhh
Q 022321 103 ANSVVYVNYGSV---TVMSEQHLTEFAWGLANSKRPFLWILRPDVVMGDSVVLPDEYFEEIKDR-GLIVSW--CNQ-EQV 175 (299)
Q Consensus 103 ~~~vVyvsfGS~---~~~~~~~~~~l~~al~~~~~~~iw~~~~~~~~~~~~~l~~~~~~~~~~n-~~v~~~--~pq-~~i 175 (299)
+++.|.+..|+. ...+.+.+.++++.|.+.+++++...++... ....-..+.+..+.+ +.+.+- +.+ ..+
T Consensus 104 ~~~~i~i~~~a~~~~k~wp~e~~~~l~~~l~~~~~~vvl~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~e~~al 180 (247)
T PF01075_consen 104 DKPYIGINPGASWPSKRWPAEKWAELIERLKERGYRVVLLGGPEEQ---EKEIADQIAAGLQNPVINLAGKTSLRELAAL 180 (247)
T ss_dssp TSSEEEEE---SSGGGS--HHHHHHHHHHHCCCT-EEEE--SSHHH---HHHHHHHHHTTHTTTTEEETTTS-HHHHHHH
T ss_pred cCCeEEEeecCCCccccCCHHHHHHHHHHHHhhCceEEEEccchHH---HHHHHHHHHHhcccceEeecCCCCHHHHHHH
Confidence 557777777776 3567889999999999888776655442200 000000111112222 223222 222 358
Q ss_pred hcCCCcceEeeccCcchhhhhHhcCCcEEec
Q 022321 176 LLHPSVGAFLTHCGWNSTMESICGGVPVICW 206 (299)
Q Consensus 176 L~~~~v~~fItHgG~~s~~Eal~~GvP~i~~ 206 (299)
++++++ ||+. -.|.++=|.+.|+|+|++
T Consensus 181 i~~a~~--~I~~-Dtg~~HlA~a~~~p~v~l 208 (247)
T PF01075_consen 181 ISRADL--VIGN-DTGPMHLAAALGTPTVAL 208 (247)
T ss_dssp HHTSSE--EEEE-SSHHHHHHHHTT--EEEE
T ss_pred HhcCCE--EEec-CChHHHHHHHHhCCEEEE
Confidence 889988 8886 567888899999999998
No 146
>TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative. This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II.
Probab=75.38 E-value=14 Score=33.93 Aligned_cols=98 Identities=11% Similarity=0.132 Sum_probs=61.6
Q ss_pred CCceEEEeecCC---cccCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCcCCChhhhhhhcC-CeE-EEee--cch-hh
Q 022321 103 ANSVVYVNYGSV---TVMSEQHLTEFAWGLANSKRPFLWILRPDVVMGDSVVLPDEYFEEIKD-RGL-IVSW--CNQ-EQ 174 (299)
Q Consensus 103 ~~~vVyvsfGS~---~~~~~~~~~~l~~al~~~~~~~iw~~~~~~~~~~~~~l~~~~~~~~~~-n~~-v~~~--~pq-~~ 174 (299)
+++.|.+..|+. ...+.+.+.++++.|...++++++.-++... +......+.+..+. ++. +.+- +.+ ..
T Consensus 180 ~~~~i~i~p~a~~~~K~Wp~e~~~~l~~~l~~~~~~ivl~g~p~~~---e~~~~~~i~~~~~~~~~~~l~g~~sL~el~a 256 (344)
T TIGR02201 180 GQNYIVIQPTSRWFFKCWDNDRFSALIDALHARGYEVVLTSGPDKD---ELAMVNEIAQGCQTPRVTSLAGKLTLPQLAA 256 (344)
T ss_pred CCCEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEecCCCHH---HHHHHHHHHhhCCCCcccccCCCCCHHHHHH
Confidence 456777777775 3467888999999998778887766442200 00011122222221 221 2222 233 34
Q ss_pred hhcCCCcceEeeccCcchhhhhHhcCCcEEec
Q 022321 175 VLLHPSVGAFLTHCGWNSTMESICGGVPVICW 206 (299)
Q Consensus 175 iL~~~~v~~fItHgG~~s~~Eal~~GvP~i~~ 206 (299)
+++++++ ||+. -.|-++=|.+.|+|.|++
T Consensus 257 li~~a~l--~Vs~-DSGp~HlAaA~g~p~v~L 285 (344)
T TIGR02201 257 LIDHARL--FIGV-DSVPMHMAAALGTPLVAL 285 (344)
T ss_pred HHHhCCE--EEec-CCHHHHHHHHcCCCEEEE
Confidence 8989998 9998 788899999999999985
No 147
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=74.48 E-value=56 Score=28.16 Aligned_cols=80 Identities=15% Similarity=0.236 Sum_probs=52.1
Q ss_pred CCeEEEeecc---hhhhhcCCCcceEeec---cCcc-hhhhhHhcCCcEEeccCcCCHHHHHHHHHHHhCceEEecCCCC
Q 022321 162 DRGLIVSWCN---QEQVLLHPSVGAFLTH---CGWN-STMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVK 234 (299)
Q Consensus 162 ~n~~v~~~~p---q~~iL~~~~v~~fItH---gG~~-s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~ 234 (299)
+++.+.++++ ...+++.+++ ++.- .|.+ ++.||+++|+|+|+.... .....+ ...+.|. +....+
T Consensus 257 ~~v~~~g~~~~~~~~~~~~~~~~--~v~ps~~e~~~~~~~Ea~a~g~pvi~~~~~----~~~e~~-~~~~~g~-~~~~~~ 328 (381)
T COG0438 257 DNVKFLGYVPDEELAELLASADV--FVLPSLSEGFGLVLLEAMAAGTPVIASDVG----GIPEVV-EDGETGL-LVPPGD 328 (381)
T ss_pred CcEEEecccCHHHHHHHHHhCCE--EEeccccccchHHHHHHHhcCCcEEECCCC----ChHHHh-cCCCceE-ecCCCC
Confidence 5677788888 2346776766 5444 3553 469999999999776653 222222 2222466 333336
Q ss_pred HHHHHHHHHHHhcCC
Q 022321 235 RGDIEALVKEMMEGD 249 (299)
Q Consensus 235 ~~~l~~av~~ll~~~ 249 (299)
.+++..++..++++.
T Consensus 329 ~~~~~~~i~~~~~~~ 343 (381)
T COG0438 329 VEELADALEQLLEDP 343 (381)
T ss_pred HHHHHHHHHHHhcCH
Confidence 899999999999875
No 148
>PRK10422 lipopolysaccharide core biosynthesis protein; Provisional
Probab=71.86 E-value=16 Score=33.62 Aligned_cols=98 Identities=10% Similarity=0.119 Sum_probs=61.2
Q ss_pred CCceEEEeecCC---cccCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCcCCChhhhhhhc-CCe-EEEee--cch-hh
Q 022321 103 ANSVVYVNYGSV---TVMSEQHLTEFAWGLANSKRPFLWILRPDVVMGDSVVLPDEYFEEIK-DRG-LIVSW--CNQ-EQ 174 (299)
Q Consensus 103 ~~~vVyvsfGS~---~~~~~~~~~~l~~al~~~~~~~iw~~~~~~~~~~~~~l~~~~~~~~~-~n~-~v~~~--~pq-~~ 174 (299)
+++.|.+.-|+. ...+.+.+.++++.|.+.++++++..++... +......+.+... .++ -+.+- +.+ ..
T Consensus 182 ~~~~i~i~pga~~~~K~Wp~e~fa~l~~~L~~~~~~vvl~ggp~e~---e~~~~~~i~~~~~~~~~~~l~g~~sL~el~a 258 (352)
T PRK10422 182 TQNYVVIQPTARQIFKCWDNDKFSAVIDALQARGYEVVLTSGPDKD---DLACVNEIAQGCQTPPVTALAGKTTFPELGA 258 (352)
T ss_pred CCCeEEEecCCCccccCCCHHHHHHHHHHHHHCCCeEEEEcCCChH---HHHHHHHHHHhcCCCccccccCCCCHHHHHH
Confidence 356777888875 4578889999999998778887776543210 0000011211111 122 12332 233 35
Q ss_pred hhcCCCcceEeeccCcchhhhhHhcCCcEEec
Q 022321 175 VLLHPSVGAFLTHCGWNSTMESICGGVPVICW 206 (299)
Q Consensus 175 iL~~~~v~~fItHgG~~s~~Eal~~GvP~i~~ 206 (299)
+++++++ ||+. -.|-++=|.+.|+|+|++
T Consensus 259 li~~a~l--~v~n-DSGp~HlAaA~g~P~v~l 287 (352)
T PRK10422 259 LIDHAQL--FIGV-DSAPAHIAAAVNTPLICL 287 (352)
T ss_pred HHHhCCE--EEec-CCHHHHHHHHcCCCEEEE
Confidence 8889998 9986 567788889999999875
No 149
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=71.65 E-value=17 Score=33.62 Aligned_cols=98 Identities=12% Similarity=0.108 Sum_probs=54.6
Q ss_pred ceEEEeecCCcccCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCcCCCh-hhh-hhhcCCeEEE--ee-----------
Q 022321 105 SVVYVNYGSVTVMSEQHLTEFAWGLANSKRPFLWILRPDVVMGDSVVLPD-EYF-EEIKDRGLIV--SW----------- 169 (299)
Q Consensus 105 ~vVyvsfGS~~~~~~~~~~~l~~al~~~~~~~iw~~~~~~~~~~~~~l~~-~~~-~~~~~n~~v~--~~----------- 169 (299)
.+++.+.||.+..-+. ..+++.|++.++.++|+....... .+.+|. ++. ..++...+-. .|
T Consensus 3 ~i~~~~GGTGGHi~Pa--la~a~~l~~~g~~v~~vg~~~~~e--~~l~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 78 (352)
T PRK12446 3 KIVFTGGGSAGHVTPN--LAIIPYLKEDNWDISYIGSHQGIE--KTIIEKENIPYYSISSGKLRRYFDLKNIKDPFLVMK 78 (352)
T ss_pred eEEEEcCCcHHHHHHH--HHHHHHHHhCCCEEEEEECCCccc--cccCcccCCcEEEEeccCcCCCchHHHHHHHHHHHH
Confidence 4788888887654443 456777777899999997654221 111121 110 0011000000 11
Q ss_pred --cchhhhhcCCCcceEeeccCcch---hhhhHhcCCcEEec
Q 022321 170 --CNQEQVLLHPSVGAFLTHCGWNS---TMESICGGVPVICW 206 (299)
Q Consensus 170 --~pq~~iL~~~~v~~fItHgG~~s---~~Eal~~GvP~i~~ 206 (299)
.--..++..-+-.++|++||+-| ++.|...|+|+++.
T Consensus 79 ~~~~~~~i~~~~kPdvvi~~Ggy~s~p~~~aa~~~~~p~~i~ 120 (352)
T PRK12446 79 GVMDAYVRIRKLKPDVIFSKGGFVSVPVVIGGWLNRVPVLLH 120 (352)
T ss_pred HHHHHHHHHHhcCCCEEEecCchhhHHHHHHHHHcCCCEEEE
Confidence 01112344433334999999987 89999999999874
No 150
>PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional
Probab=70.13 E-value=19 Score=33.14 Aligned_cols=96 Identities=9% Similarity=0.031 Sum_probs=59.8
Q ss_pred CCceEEEeecCC----cccCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCcCCChhhhhhhcC----Ce-EEEee--cc
Q 022321 103 ANSVVYVNYGSV----TVMSEQHLTEFAWGLANSKRPFLWILRPDVVMGDSVVLPDEYFEEIKD----RG-LIVSW--CN 171 (299)
Q Consensus 103 ~~~vVyvsfGS~----~~~~~~~~~~l~~al~~~~~~~iw~~~~~~~~~~~~~l~~~~~~~~~~----n~-~v~~~--~p 171 (299)
+++.|.+.-|+. ...+.+.+.++++.|.+.++++++.-++.. ......+.+..+. ++ -+.+- +.
T Consensus 179 ~~~~i~i~pga~~~~~K~Wp~e~~a~l~~~l~~~~~~vvl~Gg~~e-----~~~~~~i~~~~~~~~~~~~~~l~g~~sL~ 253 (348)
T PRK10916 179 ERPIIGFCPGAEFGPAKRWPHYHYAELAQQLIDEGYQVVLFGSAKD-----HEAGNEILAALNTEQQAWCRNLAGETQLE 253 (348)
T ss_pred CCCEEEEeCCCCCccccCCCHHHHHHHHHHHHHCCCeEEEEeCHHh-----HHHHHHHHHhcccccccceeeccCCCCHH
Confidence 567788888773 357888999999998776788766533220 0011122222221 11 12222 23
Q ss_pred h-hhhhcCCCcceEeeccCcchhhhhHhcCCcEEec
Q 022321 172 Q-EQVLLHPSVGAFLTHCGWNSTMESICGGVPVICW 206 (299)
Q Consensus 172 q-~~iL~~~~v~~fItHgG~~s~~Eal~~GvP~i~~ 206 (299)
+ ..+++++++ ||+. -.|-++=|.+.|+|+|++
T Consensus 254 el~ali~~a~l--~I~n-DTGp~HlAaA~g~P~val 286 (348)
T PRK10916 254 QAVILIAACKA--IVTN-DSGLMHVAAALNRPLVAL 286 (348)
T ss_pred HHHHHHHhCCE--EEec-CChHHHHHHHhCCCEEEE
Confidence 3 248889988 8885 567888899999999874
No 151
>PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional
Probab=68.41 E-value=25 Score=31.91 Aligned_cols=132 Identities=11% Similarity=-0.011 Sum_probs=73.8
Q ss_pred CceEEEeec-CC--cccCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCcCCChhhhhhhcCCeEEEee--cch-hhhhc
Q 022321 104 NSVVYVNYG-SV--TVMSEQHLTEFAWGLANSKRPFLWILRPDVVMGDSVVLPDEYFEEIKDRGLIVSW--CNQ-EQVLL 177 (299)
Q Consensus 104 ~~vVyvsfG-S~--~~~~~~~~~~l~~al~~~~~~~iw~~~~~~~~~~~~~l~~~~~~~~~~n~~v~~~--~pq-~~iL~ 177 (299)
++.|.+..| |. ...+.+.+.++++.|.+.++++++..+... +....+.+.+.. .++.+.+- +.+ ..+++
T Consensus 178 ~~~i~~~~~~s~~~k~Wp~e~~a~li~~l~~~~~~ivl~~G~~~----e~~~~~~i~~~~-~~~~l~g~~sL~elaali~ 252 (322)
T PRK10964 178 GPYLVFLHATTRDDKHWPEAHWRELIGLLAPSGLRIKLPWGAEH----EEQRAKRLAEGF-PYVEVLPKLSLEQVARVLA 252 (322)
T ss_pred CCeEEEEeCCCcccccCCHHHHHHHHHHHHHCCCeEEEeCCCHH----HHHHHHHHHccC-CcceecCCCCHHHHHHHHH
Confidence 455544444 43 347888999999999877888765544321 000111111111 12333322 333 34899
Q ss_pred CCCcceEeeccCcchhhhhHhcCCcEEeccCcCCHHH------HHHHHHHHhCceEEecCCCCHHHHHHHHHHHhc
Q 022321 178 HPSVGAFLTHCGWNSTMESICGGVPVICWPFFAEQQT------NCRYACTTWGIGMEVNHDVKRGDIEALVKEMME 247 (299)
Q Consensus 178 ~~~v~~fItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~------na~~v~~~~g~G~~l~~~~~~~~l~~av~~ll~ 247 (299)
++++ ||+. ..|.++=|.+.|+|+|++=--.+... |...+ .-. ...+. +++++++-++++++|.
T Consensus 253 ~a~l--~I~n-DSGp~HlA~A~g~p~valfGpt~p~~~~p~~~~~~~~-~~~--~~cm~-~I~~e~V~~~~~~~l~ 321 (322)
T PRK10964 253 GAKA--VVSV-DTGLSHLTAALDRPNITLYGPTDPGLIGGYGKNQHAC-RSP--GKSMA-DLSAETVFQKLETLIS 321 (322)
T ss_pred hCCE--EEec-CCcHHHHHHHhCCCEEEEECCCCcccccCCCCCceee-cCC--Ccccc-cCCHHHHHHHHHHHhh
Confidence 9998 9986 46788889999999998521111111 11111 100 11121 6899999999888763
No 152
>PF00731 AIRC: AIR carboxylase; InterPro: IPR000031 Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. PurK, N5-carboxyaminoimidazole ribonucleotide (N5_CAIR) synthetase, catalyzes the conversion of 5-aminoimidazole ribonucleotide (AIR), ATP, and bicarbonate to N5-CAIR, ADP, and Pi. PurE converts N5-CAIR to CAIR, the sixth step of de novo purine biosynthesis. In the presence of high concentrations of bicarbonate, PurE is reported able to convert AIR to CAIR directly and without ATP. Some members of this family contain two copies of this domain []. The crystal structure of PurE indicates a unique quaternary structure that confirms the octameric nature of the enzyme [].; GO: 0004638 phosphoribosylaminoimidazole carboxylase activity, 0006189 'de novo' IMP biosynthetic process; PDB: 3TRH_O 2YWX_A 2NSL_A 1D7A_A 2NSJ_A 1QCZ_A 2ATE_A 2NSH_A 3RG8_C 3RGG_D ....
Probab=68.12 E-value=64 Score=26.18 Aligned_cols=137 Identities=14% Similarity=0.159 Sum_probs=65.9
Q ss_pred eEEEeecCCcccCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCcCCChhhhhhhcCCeEEEeecchhhhhcCCCcceEe
Q 022321 106 VVYVNYGSVTVMSEQHLTEFAWGLANSKRPFLWILRPDVVMGDSVVLPDEYFEEIKDRGLIVSWCNQEQVLLHPSVGAFL 185 (299)
Q Consensus 106 vVyvsfGS~~~~~~~~~~~l~~al~~~~~~~iw~~~~~~~~~~~~~l~~~~~~~~~~n~~v~~~~pq~~iL~~~~v~~fI 185 (299)
.|-|-+||.. +...+++....|++.++.+-..+-.. ...|+.+.+.+ .-+.+..++.||
T Consensus 2 ~V~Ii~gs~S--D~~~~~~a~~~L~~~gi~~~~~V~sa------HR~p~~l~~~~-------------~~~~~~~~~viI 60 (150)
T PF00731_consen 2 KVAIIMGSTS--DLPIAEEAAKTLEEFGIPYEVRVASA------HRTPERLLEFV-------------KEYEARGADVII 60 (150)
T ss_dssp EEEEEESSGG--GHHHHHHHHHHHHHTT-EEEEEE--T------TTSHHHHHHHH-------------HHTTTTTESEEE
T ss_pred eEEEEeCCHH--HHHHHHHHHHHHHHcCCCEEEEEEec------cCCHHHHHHHH-------------HHhccCCCEEEE
Confidence 3556677764 56778888888888886655444321 11233322111 112222334488
Q ss_pred eccCcchhhhhHh---cCCcEEeccCcCCHHH----HHHHHHHHhCceEEecC-CCCHHHHHHHHHHHhc--CChhHHHH
Q 022321 186 THCGWNSTMESIC---GGVPVICWPFFAEQQT----NCRYACTTWGIGMEVNH-DVKRGDIEALVKEMME--GDEGKKMR 255 (299)
Q Consensus 186 tHgG~~s~~Eal~---~GvP~i~~P~~~DQ~~----na~~v~~~~g~G~~l~~-~~~~~~l~~av~~ll~--~~~~~~~r 255 (299)
.=.|...-+-++. .-.|+|++|....+.. ....+.--.|+++..-. + +...-.-..-++|. |+ +++
T Consensus 61 a~AG~~a~Lpgvva~~t~~PVIgvP~~~~~~~g~d~l~S~vqMp~g~pvatv~i~-~~~nAA~~A~~ILa~~d~---~l~ 136 (150)
T PF00731_consen 61 AVAGMSAALPGVVASLTTLPVIGVPVSSGYLGGLDSLLSIVQMPSGVPVATVGIN-NGFNAALLAARILALKDP---ELR 136 (150)
T ss_dssp EEEESS--HHHHHHHHSSS-EEEEEE-STTTTTHHHHHHHHT--TTS--EE-SST-HHHHHHHHHHHHHHTT-H---HHH
T ss_pred EECCCcccchhhheeccCCCEEEeecCcccccCcccHHHHHhccCCCCceEEEcc-CchHHHHHHHHHHhcCCH---HHH
Confidence 8888654333322 3679999998766432 12222112355544332 1 22322223334443 44 788
Q ss_pred HHHHHHHHHHHH
Q 022321 256 QKAWEWKKKAEA 267 (299)
Q Consensus 256 ~~a~~l~~~~~~ 267 (299)
++.+..++.+++
T Consensus 137 ~kl~~~~~~~~~ 148 (150)
T PF00731_consen 137 EKLRAYREKMKE 148 (150)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHc
Confidence 888877777654
No 153
>PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria. They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D.
Probab=66.89 E-value=7.1 Score=36.17 Aligned_cols=108 Identities=13% Similarity=0.087 Sum_probs=60.9
Q ss_pred cCCeEEE-eecchhhhhcCCCcceEeeccCcchhhhhHhcCCcEEeccCcCCHHHHHHHHH---HHhCceEEecCCCCHH
Q 022321 161 KDRGLIV-SWCNQEQVLLHPSVGAFLTHCGWNSTMESICGGVPVICWPFFAEQQTNCRYAC---TTWGIGMEVNHDVKRG 236 (299)
Q Consensus 161 ~~n~~v~-~~~pq~~iL~~~~v~~fItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~---~~~g~G~~l~~~~~~~ 236 (299)
.+++... +..+-.++|..+++ .||-- .+.+.|.+..+.|+|....-.|.+...+-+. +....|..+ -+.+
T Consensus 251 ~~~i~~~~~~~~~~~ll~~aDi--LITDy-SSi~fD~~~l~KPiify~~D~~~Y~~~rg~~~~~~~~~pg~~~---~~~~ 324 (369)
T PF04464_consen 251 NSNIIFVSDNEDIYDLLAAADI--LITDY-SSIIFDFLLLNKPIIFYQPDLEEYEKERGFYFDYEEDLPGPIV---YNFE 324 (369)
T ss_dssp TTTEEE-TT-S-HHHHHHT-SE--EEESS--THHHHHGGGT--EEEE-TTTTTTTTTSSBSS-TTTSSSS-EE---SSHH
T ss_pred CCcEEECCCCCCHHHHHHhcCE--EEEec-hhHHHHHHHhCCCEEEEeccHHHHhhccCCCCchHhhCCCcee---CCHH
Confidence 4566644 44567789999999 99987 4578899999999998887666553211100 122223333 4789
Q ss_pred HHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHhcCCchHH
Q 022321 237 DIEALVKEMMEGDEGKKMRQKAWEWKKKAEAATAVGGQSYN 277 (299)
Q Consensus 237 ~l~~av~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gg~s~~ 277 (299)
+|.++|..+++++. .++++.++..+.+-. ...|.++.+
T Consensus 325 eL~~~i~~~~~~~~--~~~~~~~~~~~~~~~-~~Dg~s~er 362 (369)
T PF04464_consen 325 ELIEAIENIIENPD--EYKEKREKFRDKFFK-YNDGNSSER 362 (369)
T ss_dssp HHHHHHTTHHHHHH--HTHHHHHHHHHHHST-T--S-HHHH
T ss_pred HHHHHHHhhhhCCH--HHHHHHHHHHHHhCC-CCCchHHHH
Confidence 99999999887542 445555555555532 133444433
No 154
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=65.45 E-value=29 Score=35.57 Aligned_cols=111 Identities=13% Similarity=0.028 Sum_probs=63.8
Q ss_pred EEeecchhh---hhcCCCcceEeec---cCc-chhhhhHhcCCcEEeccCcCCHHHHHHHHHHHhCceEEecCCCCHHHH
Q 022321 166 IVSWCNQEQ---VLLHPSVGAFLTH---CGW-NSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVKRGDI 238 (299)
Q Consensus 166 v~~~~pq~~---iL~~~~v~~fItH---gG~-~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~l 238 (299)
+.+++++.+ +++.+++ |+.- -|+ ..+.|++++|+|-.+.|+..+--.-+. +..-|+.++ ..+.+++
T Consensus 346 ~~~~~~~~~l~~ly~~aDv--~v~~S~~EG~~lv~~Eama~~~~~~g~~vls~~~G~~~----~l~~~llv~-P~d~~~l 418 (726)
T PRK14501 346 FYRSLPFEELVALYRAADV--ALVTPLRDGMNLVAKEYVASRTDGDGVLILSEMAGAAA----ELAEALLVN-PNDIEGI 418 (726)
T ss_pred EeCCCCHHHHHHHHHhccE--EEecccccccCcccceEEEEcCCCCceEEEecccchhH----HhCcCeEEC-CCCHHHH
Confidence 446777664 7778888 6543 354 588999999775322332222111111 222367766 4689999
Q ss_pred HHHHHHHhcCChhHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhc
Q 022321 239 EALVKEMMEGDEGKKMRQKAWEWKKKAEAATAVGGQSYNNFDRLVKMVLHQ 289 (299)
Q Consensus 239 ~~av~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gg~s~~~l~~~v~~l~~~ 289 (299)
.++|.++++.+.. +.+++.+++.+.++ ..+...-.++|++.+...
T Consensus 419 a~ai~~~l~~~~~-e~~~r~~~~~~~v~-----~~~~~~w~~~~l~~l~~~ 463 (726)
T PRK14501 419 AAAIKRALEMPEE-EQRERMQAMQERLR-----RYDVHKWASDFLDELREA 463 (726)
T ss_pred HHHHHHHHcCCHH-HHHHHHHHHHHHHH-----hCCHHHHHHHHHHHHHHH
Confidence 9999999986521 33334444433332 335555556666666544
No 155
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=65.30 E-value=8.4 Score=31.90 Aligned_cols=33 Identities=12% Similarity=0.234 Sum_probs=22.7
Q ss_pred cCCCcceEeeccCcchhhhhHhcCCcEEeccCcC
Q 022321 177 LHPSVGAFLTHCGWNSTMESICGGVPVICWPFFA 210 (299)
Q Consensus 177 ~~~~v~~fItHgG~~s~~Eal~~GvP~i~~P~~~ 210 (299)
.+..+..||++||...+..... ++|+|-+|..+
T Consensus 31 ~~~g~dViIsRG~ta~~lr~~~-~iPVV~I~~s~ 63 (176)
T PF06506_consen 31 ESEGADVIISRGGTAELLRKHV-SIPVVEIPISG 63 (176)
T ss_dssp TTTT-SEEEEEHHHHHHHHCC--SS-EEEE---H
T ss_pred HhcCCeEEEECCHHHHHHHHhC-CCCEEEECCCH
Confidence 4566666999999999988887 99999999843
No 156
>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase. Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise.
Probab=62.78 E-value=1.6e+02 Score=28.84 Aligned_cols=109 Identities=10% Similarity=0.014 Sum_probs=67.5
Q ss_pred eEEEeecchhh---hhcCCCcceEee---ccCcch-hhhhHhcCC----cEEeccCcCCHHHHHHHHHHHhCceEEecCC
Q 022321 164 GLIVSWCNQEQ---VLLHPSVGAFLT---HCGWNS-TMESICGGV----PVICWPFFAEQQTNCRYACTTWGIGMEVNHD 232 (299)
Q Consensus 164 ~~v~~~~pq~~---iL~~~~v~~fIt---HgG~~s-~~Eal~~Gv----P~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~ 232 (299)
.++.+.+|+.+ +++.+++ ++. .-|+|- ..|.++++. |+|.--+.+ |. +.+.-++.++ .
T Consensus 364 ~~~~~~v~~~el~alYr~ADV--~lvT~lrDGmNLVa~Eyva~~~~~~GvLILSefaG-----aa---~~l~~AllVN-P 432 (487)
T TIGR02398 364 QFFTRSLPYEEVSAWFAMADV--MWITPLRDGLNLVAKEYVAAQGLLDGVLVLSEFAG-----AA---VELKGALLTN-P 432 (487)
T ss_pred EEEcCCCCHHHHHHHHHhCCE--EEECccccccCcchhhHHhhhcCCCCCEEEecccc-----ch---hhcCCCEEEC-C
Confidence 34567778765 6667777 543 347874 459999877 555544322 11 3445577776 4
Q ss_pred CCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhc
Q 022321 233 VKRGDIEALVKEMMEGDEGKKMRQKAWEWKKKAEAATAVGGQSYNNFDRLVKMVLHQ 289 (299)
Q Consensus 233 ~~~~~l~~av~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gg~s~~~l~~~v~~l~~~ 289 (299)
.+.++++++|.+.|+.+.. +-++|.+++.+.++ . .....=...|++.|...
T Consensus 433 ~d~~~~A~ai~~AL~m~~~-Er~~R~~~l~~~v~---~--~d~~~W~~~fl~~l~~~ 483 (487)
T TIGR02398 433 YDPVRMDETIYVALAMPKA-EQQARMREMFDAVN---Y--YDVQRWADEFLAAVSPQ 483 (487)
T ss_pred CCHHHHHHHHHHHHcCCHH-HHHHHHHHHHHHHh---h--CCHHHHHHHHHHHhhhc
Confidence 7999999999999997632 34555555555544 1 23333346677776543
No 157
>COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=62.61 E-value=28 Score=31.94 Aligned_cols=95 Identities=14% Similarity=0.145 Sum_probs=60.0
Q ss_pred CceEEEeec-CC---cccCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCcCCChhhhhhhcCCeEEEee--cch-hhhh
Q 022321 104 NSVVYVNYG-SV---TVMSEQHLTEFAWGLANSKRPFLWILRPDVVMGDSVVLPDEYFEEIKDRGLIVSW--CNQ-EQVL 176 (299)
Q Consensus 104 ~~vVyvsfG-S~---~~~~~~~~~~l~~al~~~~~~~iw~~~~~~~~~~~~~l~~~~~~~~~~n~~v~~~--~pq-~~iL 176 (299)
++.|.++-| |. ...+.+.+.++++.|.+.++++++..+.. +....+.+.+..+....+.+- +.+ ..++
T Consensus 175 ~~~i~i~pg~s~~~~K~wp~e~~~~l~~~l~~~~~~Vvl~g~~~-----e~e~~~~i~~~~~~~~~l~~k~sL~e~~~li 249 (334)
T COG0859 175 RPYIVINPGASRGSAKRWPLEHYAELAELLIAKGYQVVLFGGPD-----EEERAEEIAKGLPNAVILAGKTSLEELAALI 249 (334)
T ss_pred CCeEEEeccccccccCCCCHHHHHHHHHHHHHCCCEEEEecChH-----HHHHHHHHHHhcCCccccCCCCCHHHHHHHH
Confidence 578888888 44 45788999999999999886655544321 111112222233322223332 233 3477
Q ss_pred cCCCcceEeeccCcchhhhhHhcCCcEEec
Q 022321 177 LHPSVGAFLTHCGWNSTMESICGGVPVICW 206 (299)
Q Consensus 177 ~~~~v~~fItHgG~~s~~Eal~~GvP~i~~ 206 (299)
+++++ ||+. -.|-++=|.+.|+|.|++
T Consensus 250 ~~a~l--~I~~-DSg~~HlAaA~~~P~I~i 276 (334)
T COG0859 250 AGADL--VIGN-DSGPMHLAAALGTPTIAL 276 (334)
T ss_pred hcCCE--EEcc-CChHHHHHHHcCCCEEEE
Confidence 78887 7764 567778888899999985
No 158
>PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long). This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall
Probab=62.00 E-value=1.1e+02 Score=28.53 Aligned_cols=130 Identities=11% Similarity=0.102 Sum_probs=81.2
Q ss_pred ceEEEeecCCcccCHHHHHHHHHHHHc---CCCCEEEEEcCCCCCCCCcCCChhhhhh--------hc-CCeE-EEeecc
Q 022321 105 SVVYVNYGSVTVMSEQHLTEFAWGLAN---SKRPFLWILRPDVVMGDSVVLPDEYFEE--------IK-DRGL-IVSWCN 171 (299)
Q Consensus 105 ~vVyvsfGS~~~~~~~~~~~l~~al~~---~~~~~iw~~~~~~~~~~~~~l~~~~~~~--------~~-~n~~-v~~~~p 171 (299)
+-+.|-.|..+..+..+++ ++++|.+ .+.+++.-++-+ +. .+.+.++ .+ +++. +.+++|
T Consensus 184 ~~ltILvGNSgd~sNnHie-aL~~L~~~~~~~~kIivPLsYg---~~----n~~Yi~~V~~~~~~lF~~~~~~iL~e~mp 255 (360)
T PF07429_consen 184 GKLTILVGNSGDPSNNHIE-ALEALKQQFGDDVKIIVPLSYG---AN----NQAYIQQVIQAGKELFGAENFQILTEFMP 255 (360)
T ss_pred CceEEEEcCCCCCCccHHH-HHHHHHHhcCCCeEEEEECCCC---Cc----hHHHHHHHHHHHHHhcCccceeEhhhhCC
Confidence 4566677877655554443 2333332 356666554421 00 0112111 13 4665 467887
Q ss_pred hh---hhhcCCCcceEeec--cCcchhhhhHhcCCcEEeccCcCCHHHHHHHHHHHhCceEEecC-CCCHHHHHHHHHHH
Q 022321 172 QE---QVLLHPSVGAFLTH--CGWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNH-DVKRGDIEALVKEM 245 (299)
Q Consensus 172 q~---~iL~~~~v~~fItH--gG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~-~~~~~~l~~av~~l 245 (299)
-. .+|+.++++.|.+. =|.|+++-.++.|+|+..-- +..--+.+ .+.|+-+.... +++...|.++=+++
T Consensus 256 f~eYl~lL~~cDl~if~~~RQQgiGnI~lLl~~G~~v~L~~----~np~~~~l-~~~~ipVlf~~d~L~~~~v~ea~rql 330 (360)
T PF07429_consen 256 FDEYLALLSRCDLGIFNHNRQQGIGNICLLLQLGKKVFLSR----DNPFWQDL-KEQGIPVLFYGDELDEALVREAQRQL 330 (360)
T ss_pred HHHHHHHHHhCCEEEEeechhhhHhHHHHHHHcCCeEEEec----CChHHHHH-HhCCCeEEeccccCCHHHHHHHHHHH
Confidence 54 59999999887764 68999999999999997642 22233344 55677776654 78999999988887
Q ss_pred hc
Q 022321 246 ME 247 (299)
Q Consensus 246 l~ 247 (299)
..
T Consensus 331 ~~ 332 (360)
T PF07429_consen 331 AN 332 (360)
T ss_pred hh
Confidence 65
No 159
>PRK02797 4-alpha-L-fucosyltransferase; Provisional
Probab=60.72 E-value=43 Score=30.67 Aligned_cols=128 Identities=14% Similarity=0.102 Sum_probs=76.9
Q ss_pred eEEEeecCCcccCHHHHHHHHHHHH---cCCCCEEEEEcCCCCCCCCcCCChhhhhh--------hc-CCeE-EEeecch
Q 022321 106 VVYVNYGSVTVMSEQHLTEFAWGLA---NSKRPFLWILRPDVVMGDSVVLPDEYFEE--------IK-DRGL-IVSWCNQ 172 (299)
Q Consensus 106 vVyvsfGS~~~~~~~~~~~l~~al~---~~~~~~iw~~~~~~~~~~~~~l~~~~~~~--------~~-~n~~-v~~~~pq 172 (299)
-+-|-.|..+..+..+++ +++++. ..+.+++.-++-+. +. +.+.++ .+ +++. +.+++|-
T Consensus 146 ~~tIlvGNSgd~SN~Hie-~L~~l~~~~~~~v~ii~PlsYp~--gn-----~~Yi~~V~~~~~~lF~~~~~~~L~e~l~f 217 (322)
T PRK02797 146 KMTILVGNSGDRSNRHIE-ALRALHQQFGDNVKIIVPMGYPA--NN-----QAYIEEVRQAGLALFGAENFQILTEKLPF 217 (322)
T ss_pred ceEEEEeCCCCCcccHHH-HHHHHHHHhCCCeEEEEECCcCC--CC-----HHHHHHHHHHHHHhcCcccEEehhhhCCH
Confidence 355567777655554433 344443 34556665554210 00 112211 13 6776 4577774
Q ss_pred ---hhhhcCCCcceEeec--cCcchhhhhHhcCCcEEeccCcCCHHHHHHHHHHHhCceEEecC-CCCHHHHHHHHHHHh
Q 022321 173 ---EQVLLHPSVGAFLTH--CGWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNH-DVKRGDIEALVKEMM 246 (299)
Q Consensus 173 ---~~iL~~~~v~~fItH--gG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~-~~~~~~l~~av~~ll 246 (299)
..+|+.++++.|+++ =|.|+++-.++.|+|+++--. -+.+.. + .+.|+-+..+. .++...+.++=+++.
T Consensus 218 ~eYl~lL~~~Dl~~f~~~RQQgiGnl~lLi~~G~~v~l~r~---n~fwqd-l-~e~gv~Vlf~~d~L~~~~v~e~~rql~ 292 (322)
T PRK02797 218 DDYLALLRQCDLGYFIFARQQGIGTLCLLIQLGKPVVLSRD---NPFWQD-L-TEQGLPVLFTGDDLDEDIVREAQRQLA 292 (322)
T ss_pred HHHHHHHHhCCEEEEeechhhHHhHHHHHHHCCCcEEEecC---CchHHH-H-HhCCCeEEecCCcccHHHHHHHHHHHH
Confidence 459999999998886 589999999999999987532 222322 3 45577775544 677777776655443
No 160
>KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=60.40 E-value=1.5e+02 Score=27.80 Aligned_cols=143 Identities=14% Similarity=0.216 Sum_probs=84.9
Q ss_pred CCceEEEeecCCcccCHHHHHHHHHHHHc---------CCC-CEEEEEcCCCCCCCCcCCChhhhhhhc----CCeE-EE
Q 022321 103 ANSVVYVNYGSVTVMSEQHLTEFAWGLAN---------SKR-PFLWILRPDVVMGDSVVLPDEYFEEIK----DRGL-IV 167 (299)
Q Consensus 103 ~~~vVyvsfGS~~~~~~~~~~~l~~al~~---------~~~-~~iw~~~~~~~~~~~~~l~~~~~~~~~----~n~~-v~ 167 (299)
+++.++|| |.+..+.+.+..+++||.. .++ .++..+.+. +.+.+.+...+. .++. ..
T Consensus 253 ~~pallvs--STswTpDEdf~ILL~AL~~y~~~~~~~~~~lP~llciITGK------GPlkE~Y~~~I~~~~~~~v~~~t 324 (444)
T KOG2941|consen 253 ERPALLVS--STSWTPDEDFGILLEALVIYEEQLYDKTHNLPSLLCIITGK------GPLKEKYSQEIHEKNLQHVQVCT 324 (444)
T ss_pred CCCeEEEe--cCCCCCcccHHHHHHHHHhhhhhhhhccCCCCcEEEEEcCC------CchhHHHHHHHHHhcccceeeee
Confidence 56778887 4444566777888888861 222 344444432 223344433332 3444 35
Q ss_pred eec---chhhhhcCCCcceEeeccCcc-----hhhhhHhcCCcEEeccCcCCHHHHHHHHHHHhCceEEecCCCCHHHHH
Q 022321 168 SWC---NQEQVLLHPSVGAFLTHCGWN-----STMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVKRGDIE 239 (299)
Q Consensus 168 ~~~---pq~~iL~~~~v~~fItHgG~~-----s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~l~ 239 (299)
.|+ +...+|+.+++|..+|-.-.| -+..-.-+|+|++.+-+- ---..+ +.-.-|+... +.+++.
T Consensus 325 pWL~aEDYP~ll~saDlGVcLHtSSSGLDLPMKVVDMFGcglPvcA~~fk----cl~ELV-kh~eNGlvF~---Ds~eLa 396 (444)
T KOG2941|consen 325 PWLEAEDYPKLLASADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVNFK----CLDELV-KHGENGLVFE---DSEELA 396 (444)
T ss_pred cccccccchhHhhccccceEeeecCcccCcchhHHHhhcCCCceeeecch----hHHHHH-hcCCCceEec---cHHHHH
Confidence 887 456699999998887765444 355666788888776552 112233 4444566654 789999
Q ss_pred HHHHHHhcC---C--hhHHHHHHHHHH
Q 022321 240 ALVKEMMEG---D--EGKKMRQKAWEW 261 (299)
Q Consensus 240 ~av~~ll~~---~--~~~~~r~~a~~l 261 (299)
+.+.-++.| + +..++|+|+++-
T Consensus 397 ~ql~~lf~~fp~~a~~l~~lkkn~~e~ 423 (444)
T KOG2941|consen 397 EQLQMLFKNFPDNADELNQLKKNLREE 423 (444)
T ss_pred HHHHHHHhcCCCCHHHHHHHHHhhHHH
Confidence 999888873 1 123566666554
No 161
>COG4370 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=56.82 E-value=34 Score=31.25 Aligned_cols=78 Identities=18% Similarity=0.159 Sum_probs=47.5
Q ss_pred eecchhhhhcCCCcceEeeccCcchhhhhHhcCCcEEeccCcCCHHH--HHHHHHHHhCceEEecCCCCHHHHHHHHHHH
Q 022321 168 SWCNQEQVLLHPSVGAFLTHCGWNSTMESICGGVPVICWPFFAEQQT--NCRYACTTWGIGMEVNHDVKRGDIEALVKEM 245 (299)
Q Consensus 168 ~~~pq~~iL~~~~v~~fItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~--na~~v~~~~g~G~~l~~~~~~~~l~~av~~l 245 (299)
.|-...++|.++++ .|--.|. .+-.++--|+|+|.+|-.+-|+. .|.+=..-+|..+.+-. -....-..+++++
T Consensus 301 sqqsfadiLH~ada--algmAGT-AtEQavGLGkPvi~fPg~GPQy~pgFA~rQ~rLLG~sltlv~-~~aq~a~~~~q~l 376 (412)
T COG4370 301 SQQSFADILHAADA--ALGMAGT-ATEQAVGLGKPVIGFPGQGPQYNPGFAERQQRLLGASLTLVR-PEAQAAAQAVQEL 376 (412)
T ss_pred eHHHHHHHHHHHHH--HHHhccc-hHHHhhccCCceeecCCCCCCcChHHHHHHHHHhcceeeecC-CchhhHHHHHHHH
Confidence 55555567777776 4433332 22335678999999999999965 45443233566665543 2333334455559
Q ss_pred hcCC
Q 022321 246 MEGD 249 (299)
Q Consensus 246 l~~~ 249 (299)
+.|+
T Consensus 377 l~dp 380 (412)
T COG4370 377 LGDP 380 (412)
T ss_pred hcCh
Confidence 9988
No 162
>PLN02470 acetolactate synthase
Probab=54.81 E-value=1.6e+02 Score=29.31 Aligned_cols=78 Identities=12% Similarity=0.099 Sum_probs=45.2
Q ss_pred HHHHHHHHHcCCCCEEEEEcCCCCCCCCcCCChhhhhhh-c-CCeEEEeec-chhh-------hhcCCCcceEeeccCc-
Q 022321 122 LTEFAWGLANSKRPFLWILRPDVVMGDSVVLPDEYFEEI-K-DRGLIVSWC-NQEQ-------VLLHPSVGAFLTHCGW- 190 (299)
Q Consensus 122 ~~~l~~al~~~~~~~iw~~~~~~~~~~~~~l~~~~~~~~-~-~n~~v~~~~-pq~~-------iL~~~~v~~fItHgG~- 190 (299)
.+.+++.|++.|++.++-+.+... ..+.+.+ . +++.++.-- -+.. -..+..++++++|.|-
T Consensus 16 a~~l~~~L~~~GV~~vFg~pG~~~--------~~l~dal~~~~~i~~i~~rhE~~A~~~Adgyar~tg~~gv~~~t~GPG 87 (585)
T PLN02470 16 ADILVEALEREGVDTVFAYPGGAS--------MEIHQALTRSNCIRNVLCRHEQGEVFAAEGYAKASGKVGVCIATSGPG 87 (585)
T ss_pred HHHHHHHHHHcCCCEEEEcCCccc--------HHHHHHHhccCCceEEEeccHHHHHHHHHHHHHHhCCCEEEEECCCcc
Confidence 466778888888888877764421 1122222 1 123222111 1111 1123355668999884
Q ss_pred -----chhhhhHhcCCcEEecc
Q 022321 191 -----NSTMESICGGVPVICWP 207 (299)
Q Consensus 191 -----~s~~Eal~~GvP~i~~P 207 (299)
+.+.+|...++|||++.
T Consensus 88 ~~N~l~gia~A~~~~~Pvl~I~ 109 (585)
T PLN02470 88 ATNLVTGLADALLDSVPLVAIT 109 (585)
T ss_pred HHHHHHHHHHHHhcCCcEEEEe
Confidence 48899999999999995
No 163
>COG0801 FolK 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase [Coenzyme metabolism]
Probab=53.85 E-value=28 Score=28.58 Aligned_cols=35 Identities=17% Similarity=0.024 Sum_probs=26.7
Q ss_pred eEEEeecCCcccCHHHHHHHHHHHHcCCCCEEEEE
Q 022321 106 VVYVNYGSVTVMSEQHLTEFAWGLANSKRPFLWIL 140 (299)
Q Consensus 106 vVyvsfGS~~~~~~~~~~~l~~al~~~~~~~iw~~ 140 (299)
.+|+|+||....+.++++..+.+|.+.+..-++..
T Consensus 3 ~vyl~LGSNlgd~~~~l~~A~~~L~~~~~~~v~~~ 37 (160)
T COG0801 3 RVYLGLGSNLGDRLKQLRAALAALDALADIRVVAV 37 (160)
T ss_pred EEEEEecCCCCCHHHHHHHHHHHHHhCCCceEEEe
Confidence 58999999987777888889999988764334433
No 164
>COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane]
Probab=53.66 E-value=1.7e+02 Score=26.35 Aligned_cols=113 Identities=18% Similarity=0.189 Sum_probs=64.9
Q ss_pred EEEeecCCc--ccCHHHHHH----HHHHHHcCCCCEEEEEcCCCCCCCCcCCChhhhhhhcC-----CeEE-----Eeec
Q 022321 107 VYVNYGSVT--VMSEQHLTE----FAWGLANSKRPFLWILRPDVVMGDSVVLPDEYFEEIKD-----RGLI-----VSWC 170 (299)
Q Consensus 107 VyvsfGS~~--~~~~~~~~~----l~~al~~~~~~~iw~~~~~~~~~~~~~l~~~~~~~~~~-----n~~v-----~~~~ 170 (299)
..+-.|+.. ....++... +.+.+++.|.+|+.++... .|+.....+.. -+.+ .++-
T Consensus 165 AVlVGg~nk~f~~~~d~a~q~~~~l~k~l~~~g~~~lisfSRR--------Tp~~~~s~l~~~l~s~~~i~w~~~d~g~N 236 (329)
T COG3660 165 AVLVGGNNKAFVFQEDKAHQFASLLVKILENQGGSFLISFSRR--------TPDTVKSILKNNLNSSPGIVWNNEDTGYN 236 (329)
T ss_pred EEEecCCCCCCccCHHHHHHHHHHHHHHHHhCCceEEEEeecC--------CcHHHHHHHHhccccCceeEeCCCCCCCC
Confidence 333445552 333444444 4455567888999887654 22222222221 1222 2566
Q ss_pred chhhhhcCCCcceEeeccC-cchhhhhHhcCCcEEe--ccCc-CCHHH-HHHHHHHHhCceEEec
Q 022321 171 NQEQVLLHPSVGAFLTHCG-WNSTMESICGGVPVIC--WPFF-AEQQT-NCRYACTTWGIGMEVN 230 (299)
Q Consensus 171 pq~~iL~~~~v~~fItHgG-~~s~~Eal~~GvP~i~--~P~~-~DQ~~-na~~v~~~~g~G~~l~ 230 (299)
|+.++|+.++. +|+-.. .|.+.||.+.|+|+-+ .|.+ .+.+. .-+.+ ++.|++.-..
T Consensus 237 PY~~~La~Ady--ii~TaDSinM~sEAasTgkPv~~~~~~~~~s~K~r~Fi~~L-~eq~~AR~f~ 298 (329)
T COG3660 237 PYIDMLAAADY--IISTADSINMCSEAASTGKPVFILEPPNFNSLKFRIFIEQL-VEQKIARPFE 298 (329)
T ss_pred chHHHHhhcce--EEEecchhhhhHHHhccCCCeEEEecCCcchHHHHHHHHHH-HHhhhccccC
Confidence 99999988887 877766 5788999999999755 3444 34433 33444 4456655443
No 165
>cd07025 Peptidase_S66 LD-Carboxypeptidase, a serine protease, includes microcin C7 self immunity protein. LD-carboxypeptidase (Muramoyltetrapeptide carboxypeptidase; EC 3.4.17.13; Merops family S66; initially described as Carboxypeptidase II) family also includes the microcin c7 self-immunity protein (MccF) as well as uncharacterized proteins including hypothetical proteins. LD-carboxypeptidase hydrolyzes the amide bond that links the dibasic amino acids to C-terminal D-amino acids. The physiological substrates of LD-carboxypeptidase are tetrapeptide fragments (such as UDP-MurNAc-tetrapeptides) that are produced when bacterial cell walls are degraded; they contain an L-configured residue (L-lysine or meso-diaminopimelic acid residue) as the penultimate residue and D-alanine as the ultimate residue. A possible role of LD-carboxypeptidase is in peptidoglycan recycling whereby the resulting tripeptide (precursor for murein synthesis) can be reconverted into peptidoglycan by attachment o
Probab=51.27 E-value=29 Score=31.12 Aligned_cols=75 Identities=11% Similarity=0.243 Sum_probs=44.4
Q ss_pred cccCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCcCCChhhhhhhcCCeEEEeecchhhhhcCCCcceEeeccCcchhh
Q 022321 115 TVMSEQHLTEFAWGLANSKRPFLWILRPDVVMGDSVVLPDEYFEEIKDRGLIVSWCNQEQVLLHPSVGAFLTHCGWNSTM 194 (299)
Q Consensus 115 ~~~~~~~~~~l~~al~~~~~~~iw~~~~~~~~~~~~~l~~~~~~~~~~n~~v~~~~pq~~iL~~~~v~~fItHgG~~s~~ 194 (299)
+..+.+..+++.+++.+.+++.||..++..- -..+.++++...+-.+|.+ ||=+.-..+++
T Consensus 44 a~s~~~Ra~dL~~a~~d~~i~aI~~~rGG~g-----------------a~rlL~~ld~~~~~~~pK~--~iGySDiTaL~ 104 (282)
T cd07025 44 AGTDEERAADLNAAFADPEIKAIWCARGGYG-----------------ANRLLPYLDYDLIRANPKI--FVGYSDITALH 104 (282)
T ss_pred CCCHHHHHHHHHHHhhCCCCCEEEEcCCcCC-----------------HHHhhhhCCHHHHhhCCeE--EEEecHHHHHH
Confidence 3445677889999999999999999886420 1122233333333345544 55555555555
Q ss_pred hhHhc--CCcEEeccC
Q 022321 195 ESICG--GVPVICWPF 208 (299)
Q Consensus 195 Eal~~--GvP~i~~P~ 208 (299)
-+++. |++.+--|.
T Consensus 105 ~~l~~~~g~~t~hGp~ 120 (282)
T cd07025 105 LALYAKTGLVTFHGPM 120 (282)
T ss_pred HHHHHhcCceEEECcc
Confidence 55542 555555554
No 166
>cd01840 SGNH_hydrolase_yrhL_like yrhL-like subfamily of SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Most members of this sub-family appear to co-occur with N-terminal acyltransferase domains. Might be involved in lipid metabolism.
Probab=50.42 E-value=52 Score=26.07 Aligned_cols=38 Identities=16% Similarity=0.235 Sum_probs=30.2
Q ss_pred CCceEEEeecCCcccCHHHHHHHHHHHHcCCCCEEEEEc
Q 022321 103 ANSVVYVNYGSVTVMSEQHLTEFAWGLANSKRPFLWILR 141 (299)
Q Consensus 103 ~~~vVyvsfGS~~~~~~~~~~~l~~al~~~~~~~iw~~~ 141 (299)
...+|.+++||......+.++++++.+. .+.+++++..
T Consensus 50 ~~d~vvi~lGtNd~~~~~nl~~ii~~~~-~~~~ivlv~~ 87 (150)
T cd01840 50 LRKTVVIGLGTNGPFTKDQLDELLDALG-PDRQVYLVNP 87 (150)
T ss_pred CCCeEEEEecCCCCCCHHHHHHHHHHcC-CCCEEEEEEC
Confidence 4578999999997777888899998884 4678877654
No 167
>PF06180 CbiK: Cobalt chelatase (CbiK); InterPro: IPR010388 This group, typified by Salmonella typhimurium CbiK, contains anaerobic cobalt chelatases that act in the anaerobic cobalamin biosynthesis pathway [, ]. Cobalamin (vitamin B12) can be complexed with metal via ATP-dependent reactions (aerobic pathway) (e.g., in Pseudomonas denitrificans) or via ATP-independent reactions (anaerobic pathway) (e.g., in S. typhimurium) [, ]. The corresponding cobalt chelatases are not homologous. This group belongs to the class of ATP-independent, single-subunit chelatases that also includes distantly related protoporphyrin IX (PPIX) ferrochelatase (HemH) (Class II chelatases) []. The structure of S. typhimurium CbiK shows that it has a remarkably similar topology to Bacillus subtilis ferrochelatase despite only weak sequence conservation []. Both enzymes contain a histidine residue identified as the metal ion ligand, but CbiK contains a second histidine in place of the glutamic acid residue identified as a general base in PPIX ferrochelatase []. Site-directed mutagenesis has confirmed a role for this histidine and a nearby glutamic acid in cobalt binding, modulating metal ion specificity as well as catalytic efficiency []. It should be noted that CysG and Met8p, which are multifunctional proteins associated with siroheme biosynthesis, include chelatase activity and can therefore be considered as the third class of chelatases []. As with the class II chelatases, they do not require ATP for activity. However, they are not structurally similar to HemH or CbiK, and it is likely that they have arisen by the acquisition of a chelatase function within a dehydrogenase catalytic framework [, ].; GO: 0016852 sirohydrochlorin cobaltochelatase activity; PDB: 1QGO_A 2XWP_A 2XVZ_A 2XVX_A 2XVY_A.
Probab=49.96 E-value=21 Score=31.83 Aligned_cols=39 Identities=5% Similarity=0.159 Sum_probs=25.2
Q ss_pred ceEEEeecCCcccCHH-HHHHHHHHHHc--CCCCEEEEEcCC
Q 022321 105 SVVYVNYGSVTVMSEQ-HLTEFAWGLAN--SKRPFLWILRPD 143 (299)
Q Consensus 105 ~vVyvsfGS~~~~~~~-~~~~l~~al~~--~~~~~iw~~~~~ 143 (299)
.+++|||||...-..+ -+..+-+.+++ .++.|.|++.+.
T Consensus 2 AIllvsFGTs~~~ar~~ti~~ie~~~~~~fp~~~V~~AfTS~ 43 (262)
T PF06180_consen 2 AILLVSFGTSYPEAREKTIDAIEKAVREAFPDYDVRRAFTSR 43 (262)
T ss_dssp EEEEEE---S-CCCCHHHHHHHHHHHHHCSTTSEEEEEES-H
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHHHHHHHCCCCcEEEEchHH
Confidence 4799999998654444 67777777765 588999998753
No 168
>cd03412 CbiK_N Anaerobic cobalamin biosynthetic cobalt chelatase (CbiK), N-terminal domain. CbiK is part of the cobalt-early path for cobalamin biosynthesis. It catalyzes the insertion of cobalt into the oxidized form of precorrin-2, factor II (sirohydrochlorin), the second step of the anaerobic branch of vitamin B12 biosynthesis. CbiK belongs to the class II family of chelatases and is a homomeric enzyme that does not require ATP for its enzymatic activity.
Probab=49.13 E-value=31 Score=26.95 Aligned_cols=37 Identities=11% Similarity=0.310 Sum_probs=27.5
Q ss_pred ceEEEeecCCcccCHHHHHHHHHHHHc--CCCCEEEEEc
Q 022321 105 SVVYVNYGSVTVMSEQHLTEFAWGLAN--SKRPFLWILR 141 (299)
Q Consensus 105 ~vVyvsfGS~~~~~~~~~~~l~~al~~--~~~~~iw~~~ 141 (299)
.+++++|||...-..+.+..+.+.+++ .++.+-|.+.
T Consensus 2 aillv~fGS~~~~~~~~~~~i~~~l~~~~p~~~V~~aft 40 (127)
T cd03412 2 AILLVSFGTSYPTAEKTIDAIEDKVRAAFPDYEVRWAFT 40 (127)
T ss_pred eEEEEeCCCCCHHHHHHHHHHHHHHHHHCCCCeEEEEec
Confidence 589999999965445567778888864 4667778765
No 169
>PRK01231 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=47.47 E-value=1.5e+02 Score=26.89 Aligned_cols=54 Identities=19% Similarity=0.263 Sum_probs=39.6
Q ss_pred CCCcceEeeccCcchhhhhHh----cCCcEEeccCcCCHHHHHHHHHHHhCceEEecCCCCHHHHHHHHHHHhcCC
Q 022321 178 HPSVGAFLTHCGWNSTMESIC----GGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVKRGDIEALVKEMMEGD 249 (299)
Q Consensus 178 ~~~v~~fItHgG~~s~~Eal~----~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~l~~av~~ll~~~ 249 (299)
.+++ +|+=||-||+++++. .++|++++... .+|.. ..++.+++.++|.++++++
T Consensus 62 ~~d~--vi~~GGDGt~l~~~~~~~~~~~Pvlgin~G--------------~lGFl--~~~~~~~~~~~l~~~~~g~ 119 (295)
T PRK01231 62 VCDL--VIVVGGDGSLLGAARALARHNVPVLGINRG--------------RLGFL--TDIRPDELEFKLAEVLDGH 119 (295)
T ss_pred CCCE--EEEEeCcHHHHHHHHHhcCCCCCEEEEeCC--------------ccccc--ccCCHHHHHHHHHHHHcCC
Confidence 3455 999999999999875 47788887762 12221 1567899999999998764
No 170
>PLN02929 NADH kinase
Probab=47.44 E-value=44 Score=30.45 Aligned_cols=66 Identities=12% Similarity=0.151 Sum_probs=44.6
Q ss_pred CCCcceEeeccCcchhhhhHh---cCCcEEeccCcC------CHHHHHHHHHHHhCceEEecCCCCHHHHHHHHHHHhcC
Q 022321 178 HPSVGAFLTHCGWNSTMESIC---GGVPVICWPFFA------EQQTNCRYACTTWGIGMEVNHDVKRGDIEALVKEMMEG 248 (299)
Q Consensus 178 ~~~v~~fItHgG~~s~~Eal~---~GvP~i~~P~~~------DQ~~na~~v~~~~g~G~~l~~~~~~~~l~~av~~ll~~ 248 (299)
.+++ +|+-||-||++.+.. .++|++++-... .+++|.-- +..-.|..- .++.+++.+++.+++++
T Consensus 64 ~~Dl--vi~lGGDGT~L~aa~~~~~~iPvlGIN~Gp~~~~~~~~~~~~~~--~~r~lGfL~--~~~~~~~~~~L~~il~g 137 (301)
T PLN02929 64 DVDL--VVAVGGDGTLLQASHFLDDSIPVLGVNSDPTQKDEVEEYSDEFD--ARRSTGHLC--AATAEDFEQVLDDVLFG 137 (301)
T ss_pred CCCE--EEEECCcHHHHHHHHHcCCCCcEEEEECCCcccccccccccccc--cccCccccc--cCCHHHHHHHHHHHHcC
Confidence 3455 999999999999844 578999987642 22333311 112344433 46889999999999986
Q ss_pred C
Q 022321 249 D 249 (299)
Q Consensus 249 ~ 249 (299)
+
T Consensus 138 ~ 138 (301)
T PLN02929 138 R 138 (301)
T ss_pred C
Confidence 4
No 171
>PRK10353 3-methyl-adenine DNA glycosylase I; Provisional
Probab=45.87 E-value=90 Score=26.33 Aligned_cols=45 Identities=7% Similarity=-0.034 Sum_probs=33.9
Q ss_pred eccCcCCHHHHHHHHHHHhCceEEecC-------------CCCHHHHH----HHHHHHhcCC
Q 022321 205 CWPFFAEQQTNCRYACTTWGIGMEVNH-------------DVKRGDIE----ALVKEMMEGD 249 (299)
Q Consensus 205 ~~P~~~DQ~~na~~v~~~~g~G~~l~~-------------~~~~~~l~----~av~~ll~~~ 249 (299)
+.|.+.||...-..+.|...+|+.-.. .++.+.+. +-|.++|.|+
T Consensus 22 G~P~~dd~~LFE~L~Le~~QAGLSW~tIL~Kre~fr~aF~~Fd~~~VA~~~e~die~Ll~d~ 83 (187)
T PRK10353 22 GVPETDSKKLFEMICLEGQQAGLSWITVLKKRENYRACFHQFDPVKVAAMQEEDVERLVQDA 83 (187)
T ss_pred CCcCCCcHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHcCCCHHHHhCCCHHHHHHHhcCc
Confidence 567799999988777688899987632 46666664 6677888887
No 172
>COG3195 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=44.83 E-value=1.3e+02 Score=24.83 Aligned_cols=89 Identities=18% Similarity=0.237 Sum_probs=58.2
Q ss_pred hhcCCCcceEeeccC---cchhhhhHhcCCcEEeccCcC--CHHHHHHHHHHHhCceEEecC-CCCHHHHHHHHHHHhcC
Q 022321 175 VLLHPSVGAFLTHCG---WNSTMESICGGVPVICWPFFA--EQQTNCRYACTTWGIGMEVNH-DVKRGDIEALVKEMMEG 248 (299)
Q Consensus 175 iL~~~~v~~fItHgG---~~s~~Eal~~GvP~i~~P~~~--DQ~~na~~v~~~~g~G~~l~~-~~~~~~l~~av~~ll~~ 248 (299)
|-.||++.+-+--.| .-|..|--.+|.=-+. |.-. =+..|+++. +.+|.=..+.- ..+.++|.++..+-|+|
T Consensus 69 iraHPdLAgk~a~a~elta~S~~EQasAGLd~Ls-~~E~a~f~~LN~aY~-~rFgfPfI~aVkg~~k~~Il~a~~~Rl~n 146 (176)
T COG3195 69 IRAHPDLAGKAAIAGELTAESTSEQASAGLDRLS-PEEFARFTELNAAYV-ERFGFPFIIAVKGNTKDTILAAFERRLDN 146 (176)
T ss_pred HHhChhhHHHHHHHHHhhhhhHHHHHhcCcccCC-HHHHHHHHHHHHHHH-HhcCCceEEeecCCCHHHHHHHHHHHhcc
Confidence 445777743222222 4567777777764432 1111 134699998 99998777654 57899999999999998
Q ss_pred ChhHHHHHHHHHHHHHH
Q 022321 249 DEGKKMRQKAWEWKKKA 265 (299)
Q Consensus 249 ~~~~~~r~~a~~l~~~~ 265 (299)
.+..+++..+.++.+.+
T Consensus 147 ~~e~E~~tAl~eI~rIA 163 (176)
T COG3195 147 DREQEFATALAEIERIA 163 (176)
T ss_pred cHHHHHHHHHHHHHHHH
Confidence 86666776666665554
No 173
>TIGR01761 thiaz-red thiazolinyl imide reductase. This reductase is found associated with gene clusters for the biosynthesis of various non-ribosomal peptide derived natural products in which cysteine is cyclized to a thiazoline ring containing an imide double bond. Examples include yersiniabactin (irp3/YbtU) and pyochelin (PchG).
Probab=44.30 E-value=1.1e+02 Score=28.30 Aligned_cols=112 Identities=13% Similarity=0.127 Sum_probs=64.7
Q ss_pred HHHHHHcC--CCCEEEEEcCCCCCCCCcCCChhhhhhhcCCeEEEeecchhhhhcCCCcceEee------ccCcchhhhh
Q 022321 125 FAWGLANS--KRPFLWILRPDVVMGDSVVLPDEYFEEIKDRGLIVSWCNQEQVLLHPSVGAFLT------HCGWNSTMES 196 (299)
Q Consensus 125 l~~al~~~--~~~~iw~~~~~~~~~~~~~l~~~~~~~~~~n~~v~~~~pq~~iL~~~~v~~fIt------HgG~~s~~Ea 196 (299)
.+.++.+. +..++.++..+.. -...+.++.+ +.-|-...+++..+++.++.+ +-+.--+.++
T Consensus 17 h~~al~~~~~~~eLvaV~d~~~e------rA~~~A~~~g----i~~y~~~eell~d~Di~~V~ipt~~P~~~H~e~a~~a 86 (343)
T TIGR01761 17 YLAAFAAAPERFELAGILAQGSE------RSRALAHRLG----VPLYCEVEELPDDIDIACVVVRSAIVGGQGSALARAL 86 (343)
T ss_pred HHHHHHhCCCCcEEEEEEcCCHH------HHHHHHHHhC----CCccCCHHHHhcCCCEEEEEeCCCCCCccHHHHHHHH
Confidence 45566554 4677777664310 0112222222 123556677888888877764 2335667889
Q ss_pred HhcCCcEEe-ccCcCCHHHHHHHHHHHhCceEEecCCCCHHHHHHHHHHHhcCC
Q 022321 197 ICGGVPVIC-WPFFAEQQTNCRYACTTWGIGMEVNHDVKRGDIEALVKEMMEGD 249 (299)
Q Consensus 197 l~~GvP~i~-~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~l~~av~~ll~~~ 249 (299)
+.+|+.++| -|+..++-.-...++++.|+=+.+.. +. .-..++++++++.
T Consensus 87 L~aGkHVL~EKPla~~Ea~el~~~A~~~g~~l~v~~-f~--p~~~~vr~~i~~~ 137 (343)
T TIGR01761 87 LARGIHVLQEHPLHPRDIQDLLRLAERQGRRYLVNT-FY--PHLPAVRRFIEYA 137 (343)
T ss_pred HhCCCeEEEcCCCCHHHHHHHHHHHHHcCCEEEEEe-cC--HHHHHHHHHHHcc
Confidence 999999999 88876555544445466676666542 22 2344555665543
No 174
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=43.62 E-value=70 Score=27.11 Aligned_cols=146 Identities=11% Similarity=0.063 Sum_probs=73.4
Q ss_pred hccCCCCceEEEeecCCcccCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCcCCChhhhhhhc-CCeEEEeecchhhhh
Q 022321 98 LDKRDANSVVYVNYGSVTVMSEQHLTEFAWGLANSKRPFLWILRPDVVMGDSVVLPDEYFEEIK-DRGLIVSWCNQEQVL 176 (299)
Q Consensus 98 l~~~~~~~vVyvsfGS~~~~~~~~~~~l~~al~~~~~~~iw~~~~~~~~~~~~~l~~~~~~~~~-~n~~v~~~~pq~~iL 176 (299)
++-. .+.++.|..|.++ ...++.|.+.+..+.++ .+. ..+.+.+..+ +++.......+..-+
T Consensus 6 l~l~-~k~vLVIGgG~va-------~~ka~~Ll~~ga~V~VI-s~~--------~~~~l~~l~~~~~i~~~~~~~~~~~l 68 (202)
T PRK06718 6 IDLS-NKRVVIVGGGKVA-------GRRAITLLKYGAHIVVI-SPE--------LTENLVKLVEEGKIRWKQKEFEPSDI 68 (202)
T ss_pred EEcC-CCEEEEECCCHHH-------HHHHHHHHHCCCeEEEE-cCC--------CCHHHHHHHhCCCEEEEecCCChhhc
Confidence 4433 4677887777664 33455566667776554 322 1122222222 234444433444556
Q ss_pred cCCCcceEeeccCcchhhhhHh----cCCcEEeccCcCCHHHHH-----HHHHHHhCceEEecC----CCCHHHHHHHHH
Q 022321 177 LHPSVGAFLTHCGWNSTMESIC----GGVPVICWPFFAEQQTNC-----RYACTTWGIGMEVNH----DVKRGDIEALVK 243 (299)
Q Consensus 177 ~~~~v~~fItHgG~~s~~Eal~----~GvP~i~~P~~~DQ~~na-----~~v~~~~g~G~~l~~----~~~~~~l~~av~ 243 (299)
..+++ +|.--+.-.+.+.++ .++++-+ .|.+..+ ..+ ..-++-+.+.. ..-...|++.|.
T Consensus 69 ~~adl--ViaaT~d~elN~~i~~~a~~~~lvn~----~d~~~~~~f~~Pa~~-~~g~l~iaIsT~G~sP~la~~lr~~ie 141 (202)
T PRK06718 69 VDAFL--VIAATNDPRVNEQVKEDLPENALFNV----ITDAESGNVVFPSAL-HRGKLTISVSTDGASPKLAKKIRDELE 141 (202)
T ss_pred CCceE--EEEcCCCHHHHHHHHHHHHhCCcEEE----CCCCccCeEEEeeEE-EcCCeEEEEECCCCChHHHHHHHHHHH
Confidence 66666 887777666655554 3444333 3433322 222 22233333332 123344566666
Q ss_pred HHhcCChhHHHHHHHHHHHHHHHHH
Q 022321 244 EMMEGDEGKKMRQKAWEWKKKAEAA 268 (299)
Q Consensus 244 ~ll~~~~~~~~r~~a~~l~~~~~~a 268 (299)
.++ .+++..+-+.+.++++.+++.
T Consensus 142 ~~~-~~~~~~~~~~~~~~R~~~k~~ 165 (202)
T PRK06718 142 ALY-DESYESYIDFLYECRQKIKEL 165 (202)
T ss_pred HHc-chhHHHHHHHHHHHHHHHHHh
Confidence 655 344556777777777777653
No 175
>PRK06270 homoserine dehydrogenase; Provisional
Probab=42.00 E-value=2.7e+02 Score=25.68 Aligned_cols=59 Identities=10% Similarity=0.130 Sum_probs=37.3
Q ss_pred chhhhhcCCCcceEee------ccC---cchhhhhHhcCCcEEe---ccCcCCHHHHHHHHHHHhCceEEec
Q 022321 171 NQEQVLLHPSVGAFLT------HCG---WNSTMESICGGVPVIC---WPFFAEQQTNCRYACTTWGIGMEVN 230 (299)
Q Consensus 171 pq~~iL~~~~v~~fIt------HgG---~~s~~Eal~~GvP~i~---~P~~~DQ~~na~~v~~~~g~G~~l~ 230 (299)
.-.++|.++++..+|- |+| ..-+.+++.+|+++|+ -|+...-..-.+. +++.|+.+...
T Consensus 80 d~~ell~~~~~DvVvd~T~s~~~~~~~a~~~~~~aL~~GkhVVtaNK~pla~~~~eL~~~-A~~~g~~~~~e 150 (341)
T PRK06270 80 SGLEVIRSVDADVVVEATPTNIETGEPALSHCRKALERGKHVVTSNKGPLALAYKELKEL-AKKNGVRFRYE 150 (341)
T ss_pred CHHHHhhccCCCEEEECCcCcccccchHHHHHHHHHHCCCEEEcCCcHHHHhhHHHHHHH-HHHcCCEEEEe
Confidence 4456777666665665 443 3455899999999999 5775432222233 36678777654
No 176
>PF08030 NAD_binding_6: Ferric reductase NAD binding domain; InterPro: IPR013121 This entry contains ferric reductase NAD binding proteins.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3A1F_A.
Probab=41.96 E-value=21 Score=28.37 Aligned_cols=39 Identities=21% Similarity=0.263 Sum_probs=29.0
Q ss_pred ceEEEeecCCcccCHHHHHHHHHHHH-----cCCCCEEEEEcCC
Q 022321 105 SVVYVNYGSVTVMSEQHLTEFAWGLA-----NSKRPFLWILRPD 143 (299)
Q Consensus 105 ~vVyvsfGS~~~~~~~~~~~l~~al~-----~~~~~~iw~~~~~ 143 (299)
.||+|+.|+........+..++.... .....|+|+++..
T Consensus 3 ~vvlvAGG~GIt~~l~~l~~l~~~~~~~~~~~~~i~lvW~vR~~ 46 (156)
T PF08030_consen 3 NVVLVAGGSGITPILPILRDLLQRQNRGSSRTRRIKLVWVVRDA 46 (156)
T ss_dssp EEEEEEEGGGHHHHHHHHHHHHHHHHTT-----EEEEEEEES-T
T ss_pred EEEEEecCcCHHHHHHHHHHHHHhhccccccccceEEEEeeCch
Confidence 58999999997766677777777776 2356899999954
No 177
>PRK01911 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=40.14 E-value=79 Score=28.64 Aligned_cols=55 Identities=16% Similarity=0.334 Sum_probs=40.1
Q ss_pred cCCCcceEeeccCcchhhhhHh----cCCcEEeccCcCCHHHHHHHHHHHhCceEEecCCCCHHHHHHHHHHHhcCC
Q 022321 177 LHPSVGAFLTHCGWNSTMESIC----GGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVKRGDIEALVKEMMEGD 249 (299)
Q Consensus 177 ~~~~v~~fItHgG~~s~~Eal~----~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~l~~av~~ll~~~ 249 (299)
..+++ +|+=||-||++.+.. .++|++++-... +|..- +++.+++.+++.+++++.
T Consensus 63 ~~~dl--vi~lGGDGT~L~aa~~~~~~~~PilGIN~G~--------------lGFLt--~~~~~~~~~~l~~i~~g~ 121 (292)
T PRK01911 63 GSADM--VISIGGDGTFLRTATYVGNSNIPILGINTGR--------------LGFLA--TVSKEEIEETIDELLNGD 121 (292)
T ss_pred cCCCE--EEEECCcHHHHHHHHHhcCCCCCEEEEecCC--------------CCccc--ccCHHHHHHHHHHHHcCC
Confidence 34556 999999999999876 478888876521 22211 567888999999988764
No 178
>cd07062 Peptidase_S66_mccF_like Microcin C7 self-immunity protein determines resistance to exogenous microcin C7. Microcin C7 self-immunity protein (mccF): MccF, a homolog of the LD-carboxypeptidase family, mediates resistance against exogenously added microcin C7 (MccC7), a ribosomally-encoded peptide antibiotic that contains a phosphoramidate linkage to adenosine monophosphate at its C-terminus. The plasmid-encoded mccF gene is transcribed in the opposite direction to the other five genes (mccA-E) and is required for the full expression of immunity but not for production. The catalytic triad residues (Ser, His, Glu) of LD-carboxypeptidase are also conserved in MccF, strongly suggesting that MccF shares the hydrolytic activity with LD-carboxypeptidases. Substrates of MccF have not been deduced, but could likely be microcin C7 precursors. The possible role of MccF is to defend producer cells against exogenous microcin from re-entering after having been exported. It is suggested that M
Probab=39.63 E-value=56 Score=29.69 Aligned_cols=74 Identities=14% Similarity=0.143 Sum_probs=44.9
Q ss_pred ccCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCcCCChhhhhhhcCCeEEEeecchhhhhcCCCcceEeeccCcchhhh
Q 022321 116 VMSEQHLTEFAWGLANSKRPFLWILRPDVVMGDSVVLPDEYFEEIKDRGLIVSWCNQEQVLLHPSVGAFLTHCGWNSTME 195 (299)
Q Consensus 116 ~~~~~~~~~l~~al~~~~~~~iw~~~~~~~~~~~~~l~~~~~~~~~~n~~v~~~~pq~~iL~~~~v~~fItHgG~~s~~E 195 (299)
..+.+..+.|.+++.+.+++.||.+++.. +-..+.++++...+-.||.+ ||=..-..+++-
T Consensus 49 g~~~~Ra~dL~~a~~Dp~i~aI~~~rGG~-----------------g~~rlL~~lD~~~i~~~PK~--fiGySDiTaL~~ 109 (308)
T cd07062 49 ASPEERAEELMAAFADPSIKAIIPTIGGD-----------------DSNELLPYLDYELIKKNPKI--FIGYSDITALHL 109 (308)
T ss_pred CCHHHHHHHHHHHhcCCCCCEEEECCccc-----------------CHhhhhhhcCHHHHhhCCCE--EEeccHHHHHHH
Confidence 34567788999999999999999988541 11123334444444455554 665555555555
Q ss_pred hHh--cCCcEEeccC
Q 022321 196 SIC--GGVPVICWPF 208 (299)
Q Consensus 196 al~--~GvP~i~~P~ 208 (299)
+++ +|++.+--|.
T Consensus 110 al~~~~g~~t~hGp~ 124 (308)
T cd07062 110 AIYKKTGLVTYYGPN 124 (308)
T ss_pred HHHHhcCCeEEECcc
Confidence 553 2555554454
No 179
>cd07038 TPP_PYR_PDC_IPDC_like Pyrimidine (PYR) binding domain of pyruvate decarboxylase (PDC), indolepyruvate decarboxylase (IPDC) and related proteins. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of pyruvate decarboxylase (PDC) and indolepyruvate decarboxylase (IPDC) subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. The PYR and PP domains have a common fold, but do not share strong sequence conservation. The PP domain is not included in this sub-family. Most TPP-dependent enzymes have the PYR and PP domains on the same subunit although these domains can be alternatively arranged in the primary structure. TPP-dependent enzymes are multisubunit proteins, the smallest catalytic unit being a dimer-of-active sites, for many
Probab=39.34 E-value=61 Score=26.33 Aligned_cols=28 Identities=29% Similarity=0.341 Sum_probs=21.4
Q ss_pred cceEeeccCc------chhhhhHhcCCcEEeccC
Q 022321 181 VGAFLTHCGW------NSTMESICGGVPVICWPF 208 (299)
Q Consensus 181 v~~fItHgG~------~s~~Eal~~GvP~i~~P~ 208 (299)
.+++++|.|- +.+.+|...++|+|++.-
T Consensus 60 ~gv~~~t~GpG~~n~~~gl~~A~~~~~Pvl~i~g 93 (162)
T cd07038 60 LGALVTTYGVGELSALNGIAGAYAEHVPVVHIVG 93 (162)
T ss_pred CEEEEEcCCccHHHHHHHHHHHHHcCCCEEEEec
Confidence 3347777763 478899999999999964
No 180
>cd07039 TPP_PYR_POX Pyrimidine (PYR) binding domain of POX. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of pyruvate oxidase (POX) subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. The PYR and PP domains have a common fold, but do not share strong sequence conservation. The PP domain is not included in this sub-family. Most TPP-dependent enzymes have the PYR and PP domains on the same subunit although these domains can be alternatively arranged in the primary structure. TPP-dependent enzymes are multisubunit proteins, the smallest catalytic unit being a dimer-of-active sites. Lactobacillus plantarum POX is a homotetramer (dimer-of-homodimers), having two active sites per homodimer lying between PYR and PP domains of differ
Probab=38.85 E-value=2.1e+02 Score=23.18 Aligned_cols=28 Identities=21% Similarity=0.253 Sum_probs=22.3
Q ss_pred cceEeeccCc------chhhhhHhcCCcEEeccC
Q 022321 181 VGAFLTHCGW------NSTMESICGGVPVICWPF 208 (299)
Q Consensus 181 v~~fItHgG~------~s~~Eal~~GvP~i~~P~ 208 (299)
.+++++|+|- +++.+|...++|||++.-
T Consensus 64 ~~v~~~t~GpG~~n~~~~l~~A~~~~~Pvl~I~g 97 (164)
T cd07039 64 LGVCLGSSGPGAIHLLNGLYDAKRDRAPVLAIAG 97 (164)
T ss_pred CEEEEECCCCcHHHHHHHHHHHHhcCCCEEEEec
Confidence 3348888884 478899999999999963
No 181
>PRK04539 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=38.77 E-value=93 Score=28.22 Aligned_cols=55 Identities=15% Similarity=0.131 Sum_probs=40.5
Q ss_pred cCCCcceEeeccCcchhhhhHh----cCCcEEeccCcCCHHHHHHHHHHHhCceEEecCCCCHHHHHHHHHHHhcCC
Q 022321 177 LHPSVGAFLTHCGWNSTMESIC----GGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVKRGDIEALVKEMMEGD 249 (299)
Q Consensus 177 ~~~~v~~fItHgG~~s~~Eal~----~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~l~~av~~ll~~~ 249 (299)
..+++ +|+=||-||++.+.. .++|++++-.. .+|..- +++.+++.+++.++++++
T Consensus 67 ~~~D~--vi~lGGDGT~L~aa~~~~~~~~PilGIN~G--------------~lGFL~--~~~~~~~~~~l~~i~~g~ 125 (296)
T PRK04539 67 QYCDL--VAVLGGDGTFLSVAREIAPRAVPIIGINQG--------------HLGFLT--QIPREYMTDKLLPVLEGK 125 (296)
T ss_pred cCCCE--EEEECCcHHHHHHHHHhcccCCCEEEEecC--------------CCeEee--ccCHHHHHHHHHHHHcCC
Confidence 34555 999999999999864 47898887642 133332 467888999999998764
No 182
>PRK06276 acetolactate synthase catalytic subunit; Reviewed
Probab=37.65 E-value=1.9e+02 Score=28.81 Aligned_cols=27 Identities=22% Similarity=0.375 Sum_probs=22.0
Q ss_pred cceEeeccC------cchhhhhHhcCCcEEecc
Q 022321 181 VGAFLTHCG------WNSTMESICGGVPVICWP 207 (299)
Q Consensus 181 v~~fItHgG------~~s~~Eal~~GvP~i~~P 207 (299)
.+++++|.| .+++.+|.+.++|+|++-
T Consensus 64 ~gv~~~t~GPG~~n~l~~i~~A~~~~~Pvl~I~ 96 (586)
T PRK06276 64 VGVCVATSGPGATNLVTGIATAYADSSPVIALT 96 (586)
T ss_pred CEEEEECCCccHHHHHHHHHHHHhcCCCEEEEe
Confidence 344888887 458899999999999984
No 183
>PRK14077 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=37.12 E-value=83 Score=28.41 Aligned_cols=55 Identities=11% Similarity=0.118 Sum_probs=38.2
Q ss_pred cCCCcceEeeccCcchhhhhHh----cCCcEEeccCcCCHHHHHHHHHHHhCceEEecCCCCHHHHHHHHHHHhcCC
Q 022321 177 LHPSVGAFLTHCGWNSTMESIC----GGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVKRGDIEALVKEMMEGD 249 (299)
Q Consensus 177 ~~~~v~~fItHgG~~s~~Eal~----~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~l~~av~~ll~~~ 249 (299)
..+++ +|+-||-||++.++. .++|++++-... +|..- +++.+++.+++.++++++
T Consensus 63 ~~~Dl--vi~iGGDGT~L~aa~~~~~~~~PilGIN~G~--------------lGFLt--~~~~~~~~~~l~~i~~g~ 121 (287)
T PRK14077 63 KISDF--LISLGGDGTLISLCRKAAEYDKFVLGIHAGH--------------LGFLT--DITVDEAEKFFQAFFQGE 121 (287)
T ss_pred cCCCE--EEEECCCHHHHHHHHHhcCCCCcEEEEeCCC--------------cccCC--cCCHHHHHHHHHHHHcCC
Confidence 34556 999999999997755 477888775421 22211 467788888888888764
No 184
>PRK03372 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=36.96 E-value=89 Score=28.51 Aligned_cols=55 Identities=16% Similarity=0.241 Sum_probs=40.3
Q ss_pred cCCCcceEeeccCcchhhhhHh----cCCcEEeccCcCCHHHHHHHHHHHhCceEEecCCCCHHHHHHHHHHHhcCC
Q 022321 177 LHPSVGAFLTHCGWNSTMESIC----GGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVKRGDIEALVKEMMEGD 249 (299)
Q Consensus 177 ~~~~v~~fItHgG~~s~~Eal~----~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~l~~av~~ll~~~ 249 (299)
..+++ +|+=||-||++.+.. .++|++++... .+|... ++..+++.+++.++++++
T Consensus 71 ~~~D~--vi~lGGDGT~L~aar~~~~~~~PilGIN~G--------------~lGFL~--~~~~~~~~~~l~~i~~g~ 129 (306)
T PRK03372 71 DGCEL--VLVLGGDGTILRAAELARAADVPVLGVNLG--------------HVGFLA--EAEAEDLDEAVERVVDRD 129 (306)
T ss_pred cCCCE--EEEEcCCHHHHHHHHHhccCCCcEEEEecC--------------CCceec--cCCHHHHHHHHHHHHcCC
Confidence 34555 999999999999865 48899888762 123322 467888889999988765
No 185
>PRK07710 acetolactate synthase catalytic subunit; Reviewed
Probab=36.42 E-value=1.7e+02 Score=28.93 Aligned_cols=27 Identities=11% Similarity=0.400 Sum_probs=22.0
Q ss_pred cceEeeccCcc------hhhhhHhcCCcEEecc
Q 022321 181 VGAFLTHCGWN------STMESICGGVPVICWP 207 (299)
Q Consensus 181 v~~fItHgG~~------s~~Eal~~GvP~i~~P 207 (299)
.+++++|.|-| .+.+|...++|+|++-
T Consensus 79 ~gv~~~t~GPG~~N~~~gl~~A~~~~~Pvl~It 111 (571)
T PRK07710 79 PGVVIATSGPGATNVVTGLADAMIDSLPLVVFT 111 (571)
T ss_pred CeEEEECCCccHHHHHHHHHHHhhcCCCEEEEe
Confidence 44488998855 6889999999999984
No 186
>PRK02155 ppnK NAD(+)/NADH kinase family protein; Provisional
Probab=36.36 E-value=81 Score=28.49 Aligned_cols=54 Identities=19% Similarity=0.260 Sum_probs=38.6
Q ss_pred CCCcceEeeccCcchhhhhHh----cCCcEEeccCcCCHHHHHHHHHHHhCceEEecCCCCHHHHHHHHHHHhcCC
Q 022321 178 HPSVGAFLTHCGWNSTMESIC----GGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVKRGDIEALVKEMMEGD 249 (299)
Q Consensus 178 ~~~v~~fItHgG~~s~~Eal~----~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~l~~av~~ll~~~ 249 (299)
.+++ +|+-||-||+++++. .++|++++-.. . +|... +++.+++.+++.++++++
T Consensus 63 ~~d~--vi~~GGDGt~l~~~~~~~~~~~pilGIn~G------------~--lGFL~--~~~~~~~~~~l~~~~~g~ 120 (291)
T PRK02155 63 RADL--AVVLGGDGTMLGIGRQLAPYGVPLIGINHG------------R--LGFIT--DIPLDDMQETLPPMLAGN 120 (291)
T ss_pred CCCE--EEEECCcHHHHHHHHHhcCCCCCEEEEcCC------------C--ccccc--cCCHHHHHHHHHHHHcCC
Confidence 4555 999999999999976 36788876531 1 22222 467788888888888764
No 187
>PRK02649 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=36.35 E-value=71 Score=29.12 Aligned_cols=54 Identities=9% Similarity=0.230 Sum_probs=38.9
Q ss_pred CCCcceEeeccCcchhhhhHhc----CCcEEeccCcCCHHHHHHHHHHHhCceEEecCCCCHHHHHHHHHHHhcCC
Q 022321 178 HPSVGAFLTHCGWNSTMESICG----GVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVKRGDIEALVKEMMEGD 249 (299)
Q Consensus 178 ~~~v~~fItHgG~~s~~Eal~~----GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~l~~av~~ll~~~ 249 (299)
.+++ +|+=||-||++.+... ++|++++-.. .+|..- +++.+++.+++.++++++
T Consensus 68 ~~Dl--vi~iGGDGTlL~aar~~~~~~iPilGIN~G--------------~lGFLt--~~~~~~~~~~l~~l~~g~ 125 (305)
T PRK02649 68 SMKF--AIVLGGDGTVLSAARQLAPCGIPLLTINTG--------------HLGFLT--EAYLNQLDEAIDQVLAGQ 125 (305)
T ss_pred CcCE--EEEEeCcHHHHHHHHHhcCCCCcEEEEeCC--------------CCcccc--cCCHHHHHHHHHHHHcCC
Confidence 3455 9999999999999763 7898887541 122211 467888889999988765
No 188
>COG0041 PurE Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase [Nucleotide transport and metabolism]
Probab=35.71 E-value=2.4e+02 Score=23.00 Aligned_cols=139 Identities=14% Similarity=0.121 Sum_probs=76.0
Q ss_pred eEEEeecCCcccCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCcCCChhhhhhhcCCeEEEeecchhhhhcCCCcceEe
Q 022321 106 VVYVNYGSVTVMSEQHLTEFAWGLANSKRPFLWILRPDVVMGDSVVLPDEYFEEIKDRGLIVSWCNQEQVLLHPSVGAFL 185 (299)
Q Consensus 106 vVyvsfGS~~~~~~~~~~~l~~al~~~~~~~iw~~~~~~~~~~~~~l~~~~~~~~~~n~~v~~~~pq~~iL~~~~v~~fI 185 (299)
.|-|-+||.+ +.+.++..++.|+++++.+-..+-+. ...|+.+.+... =.....++.||
T Consensus 4 ~V~IIMGS~S--D~~~mk~Aa~~L~~fgi~ye~~VvSA------HRTPe~m~~ya~-------------~a~~~g~~viI 62 (162)
T COG0041 4 KVGIIMGSKS--DWDTMKKAAEILEEFGVPYEVRVVSA------HRTPEKMFEYAE-------------EAEERGVKVII 62 (162)
T ss_pred eEEEEecCcc--hHHHHHHHHHHHHHcCCCeEEEEEec------cCCHHHHHHHHH-------------HHHHCCCeEEE
Confidence 4677799975 56778888999999888765443321 123333222110 11234455577
Q ss_pred eccCcc----hhhhhHhcCCcEEeccCcCCHH---HHHHHHHHHhCceEEecC-----CCCHHHHHHHHHHHhcCChhHH
Q 022321 186 THCGWN----STMESICGGVPVICWPFFAEQQ---TNCRYACTTWGIGMEVNH-----DVKRGDIEALVKEMMEGDEGKK 253 (299)
Q Consensus 186 tHgG~~----s~~Eal~~GvP~i~~P~~~DQ~---~na~~v~~~~g~G~~l~~-----~~~~~~l~~av~~ll~~~~~~~ 253 (299)
.-.|.- .+. |...-+|+|++|....-. +----+ .++-.|+-+-. -.+..-+...|-. +.|+ .
T Consensus 63 AgAGgAAHLPGmv-Aa~T~lPViGVPv~s~~L~GlDSL~Si-VQMP~GvPVaTvaIg~a~NAallAa~ILa-~~d~---~ 136 (162)
T COG0041 63 AGAGGAAHLPGMV-AAKTPLPVIGVPVQSKALSGLDSLLSI-VQMPAGVPVATVAIGNAANAALLAAQILA-IKDP---E 136 (162)
T ss_pred ecCcchhhcchhh-hhcCCCCeEeccCccccccchHHHHHH-hcCCCCCeeEEEeecchhhHHHHHHHHHc-CCCH---H
Confidence 766632 222 233468999999863221 222223 34455554432 2333333332221 2355 7
Q ss_pred HHHHHHHHHHHHHHHHhc
Q 022321 254 MRQKAWEWKKKAEAATAV 271 (299)
Q Consensus 254 ~r~~a~~l~~~~~~a~~~ 271 (299)
++++..++++..++.+.+
T Consensus 137 l~~kl~~~r~~~~~~V~~ 154 (162)
T COG0041 137 LAEKLAEFREAQTEEVLE 154 (162)
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 999999999888766543
No 189
>PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3. Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D.
Probab=35.66 E-value=41 Score=33.68 Aligned_cols=95 Identities=14% Similarity=0.144 Sum_probs=52.8
Q ss_pred chhhhhcCCCcceEeeccC-cc-hhhhhHhcCCcEEeccCcC-CHHHHHHHH-HHHhCceEEecCCCCHHHHHHHHHHHh
Q 022321 171 NQEQVLLHPSVGAFLTHCG-WN-STMESICGGVPVICWPFFA-EQQTNCRYA-CTTWGIGMEVNHDVKRGDIEALVKEMM 246 (299)
Q Consensus 171 pq~~iL~~~~v~~fItHgG-~~-s~~Eal~~GvP~i~~P~~~-DQ~~na~~v-~~~~g~G~~l~~~~~~~~l~~av~~ll 246 (299)
+..+++.-++++.|-|-== || |-+|++.+|||.|+-=+.+ -++.+-..- ....|+-+.=+..-+.++..+.+.+.|
T Consensus 462 ~Y~dfv~GcdLgvFPSYYEPWGYTPlE~~a~gVPsITTnLsGFG~~~~~~~~~~~~~GV~VvdR~~~n~~e~v~~la~~l 541 (633)
T PF05693_consen 462 DYYDFVRGCDLGVFPSYYEPWGYTPLECTAFGVPSITTNLSGFGCWMQEHIEDPEEYGVYVVDRRDKNYDESVNQLADFL 541 (633)
T ss_dssp -HHHHHHHSSEEEE--SSBSS-HHHHHHHHTT--EEEETTBHHHHHHHTTS-HHGGGTEEEE-SSSS-HHHHHHHHHHHH
T ss_pred CHHHHhccCceeeeccccccccCChHHHhhcCCceeeccchhHHHHHHHhhccCcCCcEEEEeCCCCCHHHHHHHHHHHH
Confidence 5566777788877777322 43 8899999999999987733 233221110 134566655454667777776666665
Q ss_pred cC----C--hhHHHHHHHHHHHHHH
Q 022321 247 EG----D--EGKKMRQKAWEWKKKA 265 (299)
Q Consensus 247 ~~----~--~~~~~r~~a~~l~~~~ 265 (299)
.+ . +....|++|+++++.+
T Consensus 542 ~~f~~~~~rqri~~Rn~ae~LS~~~ 566 (633)
T PF05693_consen 542 YKFCQLSRRQRIIQRNRAERLSDLA 566 (633)
T ss_dssp HHHHT--HHHHHHHHHHHHHHGGGG
T ss_pred HHHHhCCHHHHHHHHHHHHHHHHhC
Confidence 31 1 2235777777776653
No 190
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=35.50 E-value=2.2e+02 Score=24.10 Aligned_cols=149 Identities=13% Similarity=0.084 Sum_probs=71.8
Q ss_pred hccCCCCceEEEeecCCcccCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCcCCChhhhhhh-cCCeEEEeecchhhhh
Q 022321 98 LDKRDANSVVYVNYGSVTVMSEQHLTEFAWGLANSKRPFLWILRPDVVMGDSVVLPDEYFEEI-KDRGLIVSWCNQEQVL 176 (299)
Q Consensus 98 l~~~~~~~vVyvsfGS~~~~~~~~~~~l~~al~~~~~~~iw~~~~~~~~~~~~~l~~~~~~~~-~~n~~v~~~~pq~~iL 176 (299)
++-. .+.++.|..|.++ ..-++.|.+.|..+.++-. . ..+.+.+-. .+++....--.+...+
T Consensus 5 l~l~-gk~vlVvGgG~va-------~rk~~~Ll~~ga~VtVvsp-~--------~~~~l~~l~~~~~i~~~~~~~~~~dl 67 (205)
T TIGR01470 5 ANLE-GRAVLVVGGGDVA-------LRKARLLLKAGAQLRVIAE-E--------LESELTLLAEQGGITWLARCFDADIL 67 (205)
T ss_pred EEcC-CCeEEEECcCHHH-------HHHHHHHHHCCCEEEEEcC-C--------CCHHHHHHHHcCCEEEEeCCCCHHHh
Confidence 4433 4567777776654 2234555567777654432 2 112221111 1345443212234456
Q ss_pred cCCCcceEeeccCcchhhhh-----HhcCCcEEe--ccCcCCHHHHHHHHHHHhCceEEecC----CCCHHHHHHHHHHH
Q 022321 177 LHPSVGAFLTHCGWNSTMES-----ICGGVPVIC--WPFFAEQQTNCRYACTTWGIGMEVNH----DVKRGDIEALVKEM 245 (299)
Q Consensus 177 ~~~~v~~fItHgG~~s~~Ea-----l~~GvP~i~--~P~~~DQ~~na~~v~~~~g~G~~l~~----~~~~~~l~~av~~l 245 (299)
..+.+ +|..-|...+.+. -..|+|+-+ -|-..| +..-..+ ..-++-+.+.. ..-...|++.|.++
T Consensus 68 ~~~~l--Vi~at~d~~ln~~i~~~a~~~~ilvn~~d~~e~~~-f~~pa~~-~~g~l~iaisT~G~sP~la~~lr~~ie~~ 143 (205)
T TIGR01470 68 EGAFL--VIAATDDEELNRRVAHAARARGVPVNVVDDPELCS-FIFPSIV-DRSPVVVAISSGGAAPVLARLLRERIETL 143 (205)
T ss_pred CCcEE--EEECCCCHHHHHHHHHHHHHcCCEEEECCCcccCe-EEEeeEE-EcCCEEEEEECCCCCcHHHHHHHHHHHHh
Confidence 66666 7777776644443 346777733 232222 2222222 22223333332 23345566777776
Q ss_pred hcCChhHHHHHHHHHHHHHHHHH
Q 022321 246 MEGDEGKKMRQKAWEWKKKAEAA 268 (299)
Q Consensus 246 l~~~~~~~~r~~a~~l~~~~~~a 268 (299)
+.. ++..+-+...++++.+++.
T Consensus 144 l~~-~~~~~~~~~~~~R~~~k~~ 165 (205)
T TIGR01470 144 LPP-SLGDLATLAATWRDAVKKR 165 (205)
T ss_pred cch-hHHHHHHHHHHHHHHHHhh
Confidence 643 3345666666777766643
No 191
>TIGR00118 acolac_lg acetolactate synthase, large subunit, biosynthetic type. Several isozymes of this enzyme are found in E. coli K12, one of which contains a frameshift in the large subunit gene and is not expressed.
Probab=34.64 E-value=3.6e+02 Score=26.56 Aligned_cols=27 Identities=19% Similarity=0.423 Sum_probs=22.1
Q ss_pred cceEeeccCc------chhhhhHhcCCcEEecc
Q 022321 181 VGAFLTHCGW------NSTMESICGGVPVICWP 207 (299)
Q Consensus 181 v~~fItHgG~------~s~~Eal~~GvP~i~~P 207 (299)
.+++++|.|- +++.+|...++|+|++-
T Consensus 65 ~gv~~~t~GpG~~n~l~~i~~A~~~~~Pvl~i~ 97 (558)
T TIGR00118 65 VGVVLVTSGPGATNLVTGIATAYMDSIPMVVFT 97 (558)
T ss_pred CEEEEECCCCcHHHHHHHHHHHHhcCCCEEEEe
Confidence 4448888884 58899999999999994
No 192
>PF05225 HTH_psq: helix-turn-helix, Psq domain; InterPro: IPR007889 This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster []. In pipsqueak this domain binds to GAGA sequence []. The pipsqueak family, which includes proteins from fungi, sea urchins, nematodes, insects, and vertebrates appear to be proteins essential for sequence-specific targeting of a polycomb group protein complex [].; GO: 0003677 DNA binding; PDB: 2COB_A.
Probab=34.48 E-value=80 Score=19.76 Aligned_cols=27 Identities=15% Similarity=0.371 Sum_probs=19.3
Q ss_pred CHHHHHHHHHHHhcCChhHHHHHHHHHHH
Q 022321 234 KRGDIEALVKEMMEGDEGKKMRQKAWEWK 262 (299)
Q Consensus 234 ~~~~l~~av~~ll~~~~~~~~r~~a~~l~ 262 (299)
+.++|.+||..+.++. .++++.|+++.
T Consensus 1 tee~l~~Ai~~v~~g~--~S~r~AA~~yg 27 (45)
T PF05225_consen 1 TEEDLQKAIEAVKNGK--MSIRKAAKKYG 27 (45)
T ss_dssp -HHHHHHHHHHHHTTS--S-HHHHHHHHT
T ss_pred CHHHHHHHHHHHHhCC--CCHHHHHHHHC
Confidence 4788999999998763 37887777643
No 193
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=34.42 E-value=5.8e+02 Score=27.28 Aligned_cols=102 Identities=13% Similarity=0.087 Sum_probs=57.7
Q ss_pred cchh---hhhcCCCcceEee---ccCcc-hhhhhHhcCC-----cEEeccCcCCHHHHHHHHHHHhC-ceEEecCCCCHH
Q 022321 170 CNQE---QVLLHPSVGAFLT---HCGWN-STMESICGGV-----PVICWPFFAEQQTNCRYACTTWG-IGMEVNHDVKRG 236 (299)
Q Consensus 170 ~pq~---~iL~~~~v~~fIt---HgG~~-s~~Eal~~Gv-----P~i~~P~~~DQ~~na~~v~~~~g-~G~~l~~~~~~~ 236 (299)
+|+. .++..+++ |+- .-|+| ..+|+++++. +++ +-+. -|. ..+| -|+.++ ..+.+
T Consensus 448 l~~eeL~AlY~~ADV--~lvTslrDGmNLva~Eyva~~~~~~GvLIL--SEfa----Gaa---~~L~~~AllVN-P~D~~ 515 (934)
T PLN03064 448 LDFHALCALYAVTDV--ALVTSLRDGMNLVSYEFVACQDSKKGVLIL--SEFA----GAA---QSLGAGAILVN-PWNIT 515 (934)
T ss_pred CCHHHHHHHHHhCCE--EEeCccccccCchHHHHHHhhcCCCCCeEE--eCCC----chH---HHhCCceEEEC-CCCHH
Confidence 5554 36677777 543 44776 5569999944 443 3222 111 3344 466666 47899
Q ss_pred HHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhc
Q 022321 237 DIEALVKEMMEGDEGKKMRQKAWEWKKKAEAATAVGGQSYNNFDRLVKMVLHQ 289 (299)
Q Consensus 237 ~l~~av~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gg~s~~~l~~~v~~l~~~ 289 (299)
++.++|.+.|+-+.. +-+++.+++.+.++ ..+...=...|++.|...
T Consensus 516 ~vA~AI~~AL~M~~~-Er~~r~~~~~~~V~-----~~d~~~Wa~~fl~~L~~~ 562 (934)
T PLN03064 516 EVAASIAQALNMPEE-EREKRHRHNFMHVT-----THTAQEWAETFVSELNDT 562 (934)
T ss_pred HHHHHHHHHHhCCHH-HHHHHHHHHHhhcc-----cCCHHHHHHHHHHHHHHH
Confidence 999999999873211 33444444444432 224444446667666544
No 194
>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=34.41 E-value=66 Score=31.39 Aligned_cols=51 Identities=10% Similarity=0.169 Sum_probs=35.9
Q ss_pred hhhhhHhcCCcEEeccCcCCHHHHHHHHHHHhCceEEecCCCCHH---HHHHHHHHHhcCC
Q 022321 192 STMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVKRG---DIEALVKEMMEGD 249 (299)
Q Consensus 192 s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~---~l~~av~~ll~~~ 249 (299)
++.||+++|.|+++.=-.+ =+..+ +..-.|..++. +.+ .+..++.++..|+
T Consensus 381 v~IEAMa~glPvvAt~~GG----P~EiV-~~~~tG~l~dp--~~e~~~~~a~~~~kl~~~p 434 (495)
T KOG0853|consen 381 VPIEAMACGLPVVATNNGG----PAEIV-VHGVTGLLIDP--GQEAVAELADALLKLRRDP 434 (495)
T ss_pred eeHHHHhcCCCEEEecCCC----ceEEE-EcCCcceeeCC--chHHHHHHHHHHHHHhcCH
Confidence 7899999999999864322 22333 44455666654 555 6999999999988
No 195
>COG2327 WcaK Polysaccharide pyruvyl transferase family protein [Cell wall/membrane/envelope biogenesis]
Probab=34.01 E-value=2.2e+02 Score=26.98 Aligned_cols=70 Identities=14% Similarity=0.134 Sum_probs=50.1
Q ss_pred hhhhcCCCcceEeeccCcchhhhhHhcCCcEEeccCcCCHHHHHHHHHHHhCceEEecC--CCCHHHHHHHHHHHhcCC
Q 022321 173 EQVLLHPSVGAFLTHCGWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNH--DVKRGDIEALVKEMMEGD 249 (299)
Q Consensus 173 ~~iL~~~~v~~fItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~--~~~~~~l~~av~~ll~~~ 249 (299)
..+++++++ +|. .=+-|+.=|++.|+|.|++-+ |+.+...+ +++|+--.... ..+.+.+...+.+.+++.
T Consensus 280 ~~~l~~~dl--~Vg-~R~HsaI~al~~g~p~i~i~Y---~~K~~~l~-~~~gl~~~~~~i~~~~~~~l~~~~~e~~~~~ 351 (385)
T COG2327 280 GGILAACDL--IVG-MRLHSAIMALAFGVPAIAIAY---DPKVRGLM-QDLGLPGFAIDIDPLDAEILSAVVLERLTKL 351 (385)
T ss_pred HHHhccCce--EEe-ehhHHHHHHHhcCCCeEEEee---cHHHHHHH-HHcCCCcccccCCCCchHHHHHHHHHHHhcc
Confidence 447777776 554 235578889999999999877 35555555 77786533322 689999999999888764
No 196
>PRK08322 acetolactate synthase; Reviewed
Probab=33.84 E-value=1.8e+02 Score=28.52 Aligned_cols=27 Identities=22% Similarity=0.401 Sum_probs=22.1
Q ss_pred cceEeeccCc------chhhhhHhcCCcEEecc
Q 022321 181 VGAFLTHCGW------NSTMESICGGVPVICWP 207 (299)
Q Consensus 181 v~~fItHgG~------~s~~Eal~~GvP~i~~P 207 (299)
.+++++|.|- +++.+|...++|+|++-
T Consensus 64 ~gv~~~t~GpG~~N~~~~i~~A~~~~~Pll~i~ 96 (547)
T PRK08322 64 AGVCLSTLGPGATNLVTGVAYAQLGGMPMVAIT 96 (547)
T ss_pred CEEEEECCCccHhHHHHHHHHHhhcCCCEEEEe
Confidence 4448888874 58899999999999984
No 197
>cd06533 Glyco_transf_WecG_TagA The glycosyltransferase WecG/TagA superfamily contains Escherichia coli WecG, Bacillus subtilis TagA and related proteins. E. coli WecG is believed to be a UDP-N-acetyl-D-mannosaminuronic acid transferase, and is involved in enterobacterial common antigen (eca) synthesis. B. subtilis TagA plays a key role in the Wall Teichoic Acid (WTA) biosynthetic pathway, catalyzing the transfer of N-acetylmannosamine to the C4 hydroxyl of a membrane-anchored N-acetylglucosaminyl diphospholipid to make ManNAc-beta-(1,4)-GlcNAc-pp-undecaprenyl. This is the first committed step in this pathway. Also included in this group is Xanthomonas campestris pv. campestris GumM, a glycosyltransferase participating in the biosynthesis of the exopolysaccharide xanthan.
Probab=33.68 E-value=2.7e+02 Score=22.79 Aligned_cols=87 Identities=13% Similarity=0.185 Sum_probs=51.5
Q ss_pred CccEEEEcCcccccHHHHHHHHhcCCCEEEeCcccCCcccccccccccCCCCCcccchhhhHhhccCCCCceEEEeecCC
Q 022321 35 RSSAIIFNTFDEFEHAALEVIASKFPNIYTVGPLPLLCKQVDETKFRSFGSSLWKEDTDCLKWLDKRDANSVVYVNYGSV 114 (299)
Q Consensus 35 ~~~~~l~ns~~~LE~~~~~~~r~~~p~v~~VGpl~~~~~~~~~~~~~~l~~~~~~~~~~~~~wl~~~~~~~vVyvsfGS~ 114 (299)
.....|+-+-++--..+.+.++...|++..+|-.+..-.. .++.++.+.+.... ..+|+|++|+=
T Consensus 46 ~~~v~llG~~~~~~~~~~~~l~~~yp~l~i~g~~~g~~~~--------------~~~~~i~~~I~~~~-pdiv~vglG~P 110 (171)
T cd06533 46 GLRVFLLGAKPEVLEKAAERLRARYPGLKIVGYHHGYFGP--------------EEEEEIIERINASG-ADILFVGLGAP 110 (171)
T ss_pred CCeEEEECCCHHHHHHHHHHHHHHCCCcEEEEecCCCCCh--------------hhHHHHHHHHHHcC-CCEEEEECCCC
Confidence 4567777777665555556678888998888854432211 02334667777653 45999999873
Q ss_pred cccCHHHHHHHHHHH-HcCCCCEEEEEcC
Q 022321 115 TVMSEQHLTEFAWGL-ANSKRPFLWILRP 142 (299)
Q Consensus 115 ~~~~~~~~~~l~~al-~~~~~~~iw~~~~ 142 (299)
.+ +.++... ...+..++..++.
T Consensus 111 ----kQ--E~~~~~~~~~l~~~v~~~vG~ 133 (171)
T cd06533 111 ----KQ--ELWIARHKDRLPVPVAIGVGG 133 (171)
T ss_pred ----HH--HHHHHHHHHHCCCCEEEEece
Confidence 21 1222223 2346676666664
No 198
>PRK14092 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
Probab=33.57 E-value=1e+02 Score=25.36 Aligned_cols=30 Identities=23% Similarity=0.247 Sum_probs=22.0
Q ss_pred CCceEEEeecCCcccCHHHHHHHHHHHHcC
Q 022321 103 ANSVVYVNYGSVTVMSEQHLTEFAWGLANS 132 (299)
Q Consensus 103 ~~~vVyvsfGS~~~~~~~~~~~l~~al~~~ 132 (299)
.+..+|+++||......+.+...++.|.+.
T Consensus 6 ~~~~v~i~LGSNlg~~~~~l~~A~~~L~~~ 35 (163)
T PRK14092 6 ASALAYVGLGANLGDAAATLRSVLAELAAA 35 (163)
T ss_pred cCCEEEEEecCchHhHHHHHHHHHHHHHhC
Confidence 445789999999655566777777777664
No 199
>PRK03378 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=33.53 E-value=1e+02 Score=27.91 Aligned_cols=55 Identities=13% Similarity=0.149 Sum_probs=39.0
Q ss_pred cCCCcceEeeccCcchhhhhHh----cCCcEEeccCcCCHHHHHHHHHHHhCceEEecCCCCHHHHHHHHHHHhcCC
Q 022321 177 LHPSVGAFLTHCGWNSTMESIC----GGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVKRGDIEALVKEMMEGD 249 (299)
Q Consensus 177 ~~~~v~~fItHgG~~s~~Eal~----~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~l~~av~~ll~~~ 249 (299)
..+++ +|+=||-||++.++. +++|++++-... +|..- .++.+++.+++++++++.
T Consensus 62 ~~~d~--vi~lGGDGT~L~aa~~~~~~~~Pilgin~G~--------------lGFl~--~~~~~~~~~~l~~i~~g~ 120 (292)
T PRK03378 62 QQADL--AIVVGGDGNMLGAARVLARYDIKVIGINRGN--------------LGFLT--DLDPDNALQQLSDVLEGH 120 (292)
T ss_pred CCCCE--EEEECCcHHHHHHHHHhcCCCCeEEEEECCC--------------CCccc--ccCHHHHHHHHHHHHcCC
Confidence 34555 999999999999974 377888776521 12211 456888899999988764
No 200
>PF10093 DUF2331: Uncharacterized protein conserved in bacteria (DUF2331); InterPro: IPR016633 This entry describes a conserved hypothetical protein that typically is encoded next to the gene efp for translation elongation factor P. The function is unknown.
Probab=32.85 E-value=70 Score=30.07 Aligned_cols=87 Identities=13% Similarity=0.153 Sum_probs=54.7
Q ss_pred CHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCC-cCCC-----hhhhhhhcCCeE--EEeecchhh---hhcCCCcceEee
Q 022321 118 SEQHLTEFAWGLANSKRPFLWILRPDVVMGDS-VVLP-----DEYFEEIKDRGL--IVSWCNQEQ---VLLHPSVGAFLT 186 (299)
Q Consensus 118 ~~~~~~~l~~al~~~~~~~iw~~~~~~~~~~~-~~l~-----~~~~~~~~~n~~--v~~~~pq~~---iL~~~~v~~fIt 186 (299)
+...+..+++++++.+.++...+......... ..+. .+- ....+++. +.+|+||.+ +|-.+++ =+=
T Consensus 193 e~~~l~~ll~~~~~~~~pv~llvp~g~~~~~~~~~~~~~~~~~g~-~~~~g~l~l~~lPF~~Q~~yD~LLw~cD~--NfV 269 (374)
T PF10093_consen 193 ENAALASLLDAWAASPKPVHLLVPEGRALNSLAAWLGDALLQAGD-SWQRGNLTLHVLPFVPQDDYDRLLWACDF--NFV 269 (374)
T ss_pred CchHHHHHHHHHhcCCCCeEEEecCCccHHHHHHHhccccccCcc-ccccCCeEEEECCCCCHHHHHHHHHhCcc--ceE
Confidence 45558889999998888877766543211100 0011 000 01124444 569999975 8888887 333
Q ss_pred ccCcchhhhhHhcCCcEEeccC
Q 022321 187 HCGWNSTMESICGGVPVICWPF 208 (299)
Q Consensus 187 HgG~~s~~Eal~~GvP~i~~P~ 208 (299)
+ |==|..-|..+|+|+|==.+
T Consensus 270 R-GEDSfVRAqwAgkPFvWhIY 290 (374)
T PF10093_consen 270 R-GEDSFVRAQWAGKPFVWHIY 290 (374)
T ss_pred e-cchHHHHHHHhCCCceEecC
Confidence 3 67799999999999985433
No 201
>PRK14075 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=32.79 E-value=1.5e+02 Score=26.19 Aligned_cols=53 Identities=9% Similarity=0.232 Sum_probs=37.3
Q ss_pred CCcceEeeccCcchhhhhHh-cCCcEEeccCcCCHHHHHHHHHHHhCceEEecCCCCHHHHHHHHHHHhcCC
Q 022321 179 PSVGAFLTHCGWNSTMESIC-GGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVKRGDIEALVKEMMEGD 249 (299)
Q Consensus 179 ~~v~~fItHgG~~s~~Eal~-~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~l~~av~~ll~~~ 249 (299)
+++ +|+=||-||++.++. .++|++++-... +|... ..+.+++.+++.++++++
T Consensus 42 ~d~--vi~iGGDGT~L~a~~~~~~Pilgin~G~--------------lGfl~--~~~~~~~~~~l~~~~~g~ 95 (256)
T PRK14075 42 ADL--IIVVGGDGTVLKAAKKVGTPLVGFKAGR--------------LGFLS--SYTLEEIDRFLEDLKNWN 95 (256)
T ss_pred CCE--EEEECCcHHHHHHHHHcCCCEEEEeCCC--------------Ccccc--ccCHHHHHHHHHHHHcCC
Confidence 445 999999999999876 578877765321 22222 467788888888887754
No 202
>PF02776 TPP_enzyme_N: Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; InterPro: IPR012001 A number of enzymes require thiamine pyrophosphate (TPP) (vitamin B1) as a cofactor. It has been shown [] that some of these enzymes are structurally related. This represents the N-terminal TPP binding domain of TPP enzymes.; GO: 0030976 thiamine pyrophosphate binding; PDB: 3HWX_1 3FLM_B 3HWW_A 2JLC_A 2JLA_A 2VBG_A 2VBF_B 2Q29_A 2Q27_B 2Q28_B ....
Probab=32.20 E-value=1.1e+02 Score=24.86 Aligned_cols=27 Identities=15% Similarity=0.311 Sum_probs=20.5
Q ss_pred ceEeeccC------cchhhhhHhcCCcEEeccC
Q 022321 182 GAFLTHCG------WNSTMESICGGVPVICWPF 208 (299)
Q Consensus 182 ~~fItHgG------~~s~~Eal~~GvP~i~~P~ 208 (299)
+++++|.| .+++.+|...++|+|++.-
T Consensus 66 ~v~~~~~GpG~~n~~~~l~~A~~~~~Pvl~i~g 98 (172)
T PF02776_consen 66 GVVIVTSGPGATNALTGLANAYADRIPVLVITG 98 (172)
T ss_dssp EEEEEETTHHHHTTHHHHHHHHHTT-EEEEEEE
T ss_pred eEEEeecccchHHHHHHHhhcccceeeEEEEec
Confidence 33888887 4578889999999999864
No 203
>TIGR03609 S_layer_CsaB polysaccharide pyruvyl transferase CsaB. The CsaB protein (cell surface anchoring B) of Bacillus anthracis adds a pyruvoyl group to peptidoglycan-associated polysaccharide. This addition is required for proteins with an S-layer homology domain (pfam00395) to bind. Within the larger group of proteins described by Pfam model pfam04230, this model represents a distinct clade that nearly exactly follows the phylogenetic distribution of the S-layer homology domain (pfam00395).
Probab=32.12 E-value=3.6e+02 Score=23.87 Aligned_cols=112 Identities=11% Similarity=0.188 Sum_probs=55.2
Q ss_pred CceEEEeecCCcccCHHHHHHH---HHHHH-cCCCCEEEEEcCCCCCCCCcCCChhhhhhhcCCeEEE-eecchh--hhh
Q 022321 104 NSVVYVNYGSVTVMSEQHLTEF---AWGLA-NSKRPFLWILRPDVVMGDSVVLPDEYFEEIKDRGLIV-SWCNQE--QVL 176 (299)
Q Consensus 104 ~~vVyvsfGS~~~~~~~~~~~l---~~al~-~~~~~~iw~~~~~~~~~~~~~l~~~~~~~~~~n~~v~-~~~pq~--~iL 176 (299)
++.|.|++-.......+..+.+ ++.+. +.++++++.--... ........+.+.++++..+. ..-|+. .++
T Consensus 172 ~~~i~i~~r~~~~~~~~~~~~l~~~l~~l~~~~g~~v~~i~~~~~---~D~~~~~~l~~~~~~~~~i~~~~~~~e~~~~i 248 (298)
T TIGR03609 172 EPVIVVSLRPWPLLDVSRLLRLLRALDRLQRDTGAFVLFLPFQQP---QDLPLARALRDQLLGPAEVLSPLDPEELLGLF 248 (298)
T ss_pred CCeEEEEECCCCcCCHHHHHHHHHHHHHHHHhhCCeEEEEeCCcc---hhHHHHHHHHHhcCCCcEEEecCCHHHHHHHH
Confidence 4577777755322333333334 44443 34888776542110 00001112222333333333 222332 477
Q ss_pred cCCCcceEeeccCcchhhhhHhcCCcEEeccCcCCHHHHHHHHHHHhCc
Q 022321 177 LHPSVGAFLTHCGWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGI 225 (299)
Q Consensus 177 ~~~~v~~fItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~ 225 (299)
+++++ +|+-== -++.-|+.+|||.+++++ |. .....+ +..|.
T Consensus 249 ~~~~~--vI~~Rl-H~~I~A~~~gvP~i~i~y--~~-K~~~~~-~~~g~ 290 (298)
T TIGR03609 249 ASARL--VIGMRL-HALILAAAAGVPFVALSY--DP-KVRAFA-ADAGV 290 (298)
T ss_pred hhCCE--EEEech-HHHHHHHHcCCCEEEeec--cH-HHHHHH-HHhCC
Confidence 78887 887433 345568889999998854 32 333334 55554
No 204
>PRK15062 hydrogenase isoenzymes formation protein HypD; Provisional
Probab=32.06 E-value=3e+02 Score=25.79 Aligned_cols=61 Identities=15% Similarity=0.177 Sum_probs=38.6
Q ss_pred HHhCceEEecCCCCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhc
Q 022321 221 TTWGIGMEVNHDVKRGDIEALVKEMMEGDEGKKMRQKAWEWKKKAEAATAVGGQSYNNFDRLVKMVLHQ 289 (299)
Q Consensus 221 ~~~g~G~~l~~~~~~~~l~~av~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gg~s~~~l~~~v~~l~~~ 289 (299)
+++|+-..+. .+++.+|..+|..++. .+.+.-.++.....+++...|+..+ .++++++...
T Consensus 209 ~~y~~P~VVa-GFEp~DiL~ai~~lv~-----q~~~g~~~v~N~Y~r~V~~eGN~~A--~~~i~~vFe~ 269 (364)
T PRK15062 209 EEYGIPVVVA-GFEPLDILQSILMLVR-----QLEEGRAEVENQYTRVVKEEGNLKA--QELIAEVFEV 269 (364)
T ss_pred HHcCCCeEEe-ccCHHHHHHHHHHHHH-----HHHCCCceEEEccceeeCcccCHHH--HHHHHHHcCc
Confidence 6777777776 4778888888777764 2333333344445555677777766 7777776543
No 205
>PRK06276 acetolactate synthase catalytic subunit; Reviewed
Probab=31.47 E-value=3.1e+02 Score=27.25 Aligned_cols=59 Identities=15% Similarity=0.188 Sum_probs=34.6
Q ss_pred EeeccCcchhhhh--HhcCCcEEeccCcCCHHHHHHHHHHHhCc-eEEecCCCCHHHHHHHHHHHhc
Q 022321 184 FLTHCGWNSTMES--ICGGVPVICWPFFAEQQTNCRYACTTWGI-GMEVNHDVKRGDIEALVKEMME 247 (299)
Q Consensus 184 fItHgG~~s~~Ea--l~~GvP~i~~P~~~DQ~~na~~v~~~~g~-G~~l~~~~~~~~l~~av~~ll~ 247 (299)
++..+|++.+... +.++-+....-+ ......++.+ +.+|+ |.++ -+.++|.+++++.++
T Consensus 470 V~NN~~~g~~~~~~~~~~~~~~~~~~~-~~~~d~~~la-~a~G~~~~~v---~~~~el~~al~~a~~ 531 (586)
T PRK06276 470 IFDNRTLGMVYQWQNLYYGKRQSEVHL-GETPDFVKLA-ESYGVKADRV---EKPDEIKEALKEAIK 531 (586)
T ss_pred EEeCCchHHHHHHHHHHhCCCcccccC-CCCCCHHHHH-HHCCCeEEEE---CCHHHHHHHHHHHHh
Confidence 7888888866432 334443322211 0124455555 77775 4444 378999999998864
No 206
>COG1609 PurR Transcriptional regulators [Transcription]
Probab=30.85 E-value=3.3e+02 Score=24.87 Aligned_cols=40 Identities=13% Similarity=0.161 Sum_probs=20.8
Q ss_pred HhhccCCCCceEEEeecCCcccCHHHHHHHHHHHHcCCCC
Q 022321 96 KWLDKRDANSVVYVNYGSVTVMSEQHLTEFAWGLANSKRP 135 (299)
Q Consensus 96 ~wl~~~~~~~vVyvsfGS~~~~~~~~~~~l~~al~~~~~~ 135 (299)
++|-+.+.+.+.|++.+.......+....+.+++++.+..
T Consensus 168 ~~L~~~G~~~i~~i~~~~~~~~~~~R~~Gf~~al~~~~~~ 207 (333)
T COG1609 168 EHLIELGHRRIAFIGGPLDSSASRERLEGYRAALREAGLP 207 (333)
T ss_pred HHHHHCCCceEEEEeCCCccccHhHHHHHHHHHHHHCCCC
Confidence 3444444555666655542223344556666666665554
No 207
>cd07035 TPP_PYR_POX_like Pyrimidine (PYR) binding domain of POX and related proteins. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of pyruvate oxidase (POX) and related protiens subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. A polar interaction between the conserved glutamate of the PYR domain and the N1' of the TPP aminopyrimidine ring is shared by most TPP-dependent enzymes, and participates in the activation of TPP. For glyoxylate carboligase, which belongs to this subfamily, but lacks this conserved glutamate, the rate of the initial TPP activation step is reduced but the ensuing steps of the enzymic reaction proceed efficiently. The PYR and PP domains have a common fold, but do not share strong sequence conservatio
Probab=30.78 E-value=2.7e+02 Score=21.91 Aligned_cols=26 Identities=12% Similarity=0.202 Sum_probs=21.0
Q ss_pred eEeeccC------cchhhhhHhcCCcEEeccC
Q 022321 183 AFLTHCG------WNSTMESICGGVPVICWPF 208 (299)
Q Consensus 183 ~fItHgG------~~s~~Eal~~GvP~i~~P~ 208 (299)
++++|+| .+.+.+|...++|+|++.-
T Consensus 62 v~~~~~gpG~~n~~~~l~~A~~~~~Pll~i~~ 93 (155)
T cd07035 62 VVLVTSGPGLTNAVTGLANAYLDSIPLLVITG 93 (155)
T ss_pred EEEEcCCCcHHHHHHHHHHHHhhCCCEEEEeC
Confidence 3888866 3578889999999999964
No 208
>PLN02935 Bifunctional NADH kinase/NAD(+) kinase
Probab=30.60 E-value=92 Score=30.52 Aligned_cols=54 Identities=11% Similarity=0.219 Sum_probs=38.7
Q ss_pred CCCcceEeeccCcchhhhhHhc----CCcEEeccCcCCHHHHHHHHHHHhCceEEecCCCCHHHHHHHHHHHhcCC
Q 022321 178 HPSVGAFLTHCGWNSTMESICG----GVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVKRGDIEALVKEMMEGD 249 (299)
Q Consensus 178 ~~~v~~fItHgG~~s~~Eal~~----GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~l~~av~~ll~~~ 249 (299)
.+++ +|+=||-||++.+... ++|++++-+ -. +|.. . .++.+++.+++.++++++
T Consensus 262 ~~Dl--VIsiGGDGTlL~Aar~~~~~~iPILGIN~------------G~--LGFL-t-~i~~~e~~~~Le~il~G~ 319 (508)
T PLN02935 262 KVDL--VITLGGDGTVLWAASMFKGPVPPVVPFSM------------GS--LGFM-T-PFHSEQYRDCLDAILKGP 319 (508)
T ss_pred CCCE--EEEECCcHHHHHHHHHhccCCCcEEEEeC------------CC--ccee-c-ccCHHHHHHHHHHHHcCC
Confidence 4555 9999999999999763 567776632 11 3332 1 578899999999998765
No 209
>PF04558 tRNA_synt_1c_R1: Glutaminyl-tRNA synthetase, non-specific RNA binding region part 1 ; InterPro: IPR007639 The aminoacyl-tRNA synthetases (6.1.1. from EC) catalyse the attachment of an amino acid to its cognate transfer RNA molecule in a highly specific two-step reaction. These proteins differ widely in size and oligomeric state, and have limited sequence homology []. The 20 aminoacyl-tRNA synthetases are divided into two classes, I and II. Class I aminoacyl-tRNA synthetases contain a characteristic Rossman fold catalytic domain and are mostly monomeric []. Class II aminoacyl-tRNA synthetases share an anti-parallel beta-sheet fold flanked by alpha-helices [], and are mostly dimeric or multimeric, containing at least three conserved regions [, , ]. However, tRNA binding involves an alpha-helical structure that is conserved between class I and class II synthetases. In reactions catalysed by the class I aminoacyl-tRNA synthetases, the aminoacyl group is coupled to the 2'-hydroxyl of the tRNA, while, in class II reactions, the 3'-hydroxyl site is preferred. The synthetases specific for arginine, cysteine, glutamic acid, glutamine, isoleucine, leucine, methionine, tyrosine, tryptophan and valine belong to class I synthetases. The synthetases specific for alanine, asparagine, aspartic acid, glycine, histidine, lysine, phenylalanine, proline, serine, and threonine belong to class-II synthetases []. Based on their mode of binding to the tRNA acceptor stem, both classes of tRNA synthetases have been subdivided into three subclasses, designated 1a, 1b, 1c and 2a, 2b, 2c. This is a domain found N-terminal to the catalytic domain of glutaminyl-tRNA synthetase (6.1.1.18 from EC) in eukaryotes but not in Escherichia coli. This domain is thought to bind RNA in a non-specific manner, enhancing interactions between the tRNA and enzyme, but is not essential for enzyme function [].; GO: 0000166 nucleotide binding, 0004812 aminoacyl-tRNA ligase activity, 0005524 ATP binding, 0006418 tRNA aminoacylation for protein translation, 0005737 cytoplasm; PDB: 3TL4_X.
Probab=30.21 E-value=54 Score=27.01 Aligned_cols=30 Identities=27% Similarity=0.491 Sum_probs=20.7
Q ss_pred HHHHHHHHhCceEEecCCCCHHHHHHHHHHHhcCC
Q 022321 215 NCRYACTTWGIGMEVNHDVKRGDIEALVKEMMEGD 249 (299)
Q Consensus 215 na~~v~~~~g~G~~l~~~~~~~~l~~av~~ll~~~ 249 (299)
.+..- ++.|+|+.+ |+++|.++|.++++..
T Consensus 104 ~~~Fe-~~cGVGV~V----T~E~I~~~V~~~i~~~ 133 (164)
T PF04558_consen 104 VAEFE-KACGVGVVV----TPEQIEAAVEKYIEEN 133 (164)
T ss_dssp HHHHH-HTTTTT--------HHHHHHHHHHHHHHT
T ss_pred HHHHH-HHcCCCeEE----CHHHHHHHHHHHHHHh
Confidence 34443 889999965 8999999999999743
No 210
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=30.14 E-value=45 Score=30.05 Aligned_cols=39 Identities=23% Similarity=0.369 Sum_probs=31.8
Q ss_pred cCcchhh--hhHhcCCcEEeccCcCCHHHHHHHHHHHhCce
Q 022321 188 CGWNSTM--ESICGGVPVICWPFFAEQQTNCRYACTTWGIG 226 (299)
Q Consensus 188 gG~~s~~--Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G 226 (299)
||||+++ -|-.+||-++++-+...|..+++......|+.
T Consensus 81 CGWG~l~~~aA~~y~v~V~GvTlS~~Q~~~~~~r~~~~gl~ 121 (283)
T COG2230 81 CGWGGLAIYAAEEYGVTVVGVTLSEEQLAYAEKRIAARGLE 121 (283)
T ss_pred CChhHHHHHHHHHcCCEEEEeeCCHHHHHHHHHHHHHcCCC
Confidence 6888654 45667999999999999999998743778888
No 211
>COG4394 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=29.24 E-value=4.5e+02 Score=24.04 Aligned_cols=151 Identities=14% Similarity=0.228 Sum_probs=77.8
Q ss_pred HHHHHHHHHHcCCCCEEEEEcCCCCCC-CCcC--CC----hhhhhhhcCCeEEEeecchhh---hhcCCCcceEeeccCc
Q 022321 121 HLTEFAWGLANSKRPFLWILRPDVVMG-DSVV--LP----DEYFEEIKDRGLIVSWCNQEQ---VLLHPSVGAFLTHCGW 190 (299)
Q Consensus 121 ~~~~l~~al~~~~~~~iw~~~~~~~~~-~~~~--l~----~~~~~~~~~n~~v~~~~pq~~---iL~~~~v~~fItHgG~ 190 (299)
.+...++.+++.+.+++..+....... ..+. .+ .+...+-+=++.+.+|+||.+ +|--|++ -+-+ |-
T Consensus 190 a~~s~ieq~r~a~~p~llL~~e~~~~~~~~~~~~~~~~a~Gdv~~~~~lrvvklPFvpqddyd~LL~lcD~--n~VR-GE 266 (370)
T COG4394 190 ALPSWIEQLRKADKPILLLIPEGKTQANFAKYFDNNNNADGDVFQTAKLRVVKLPFVPQDDYDELLWLCDF--NLVR-GE 266 (370)
T ss_pred chHHHHHHHHhcCCCEEEEcccchHHHHHHHHcCCCcccccchhcccceEEEEecCCcHhHHHHHHHhccc--ceee-cc
Confidence 455677777778888777665331100 0000 00 000011122345679999975 8877887 3333 67
Q ss_pred chhhhhHhcCCcEEe--ccCcCCHHHHHHHHHHHhCceEEecC--CCCHHHHHHHHHHHhc----CC---h-------hH
Q 022321 191 NSTMESICGGVPVIC--WPFFAEQQTNCRYACTTWGIGMEVNH--DVKRGDIEALVKEMME----GD---E-------GK 252 (299)
Q Consensus 191 ~s~~Eal~~GvP~i~--~P~~~DQ~~na~~v~~~~g~G~~l~~--~~~~~~l~~av~~ll~----~~---~-------~~ 252 (299)
-|...|..+|.|.+= .|. |....-+.+ +.+ +++ ..-+.+..+++++... ++ . -+
T Consensus 267 DSFVRAq~agkPflWHIYpQ--dentHl~KL-eaF-----ldky~~~lp~~~a~alrt~~~~~N~~~ls~~w~~f~~~~~ 338 (370)
T COG4394 267 DSFVRAQLAGKPFLWHIYPQ--DENTHLAKL-EAF-----LDKYCPFLPPNTAKALRTFWIAWNAGRLSDDWSYFFKNLK 338 (370)
T ss_pred hHHHHHHHcCCCcEEEecCC--ccccHHHHH-HHH-----HHHhCCCCCHHHHHHHHHHHHHhcCCcccccHHHHHHhhH
Confidence 899999999999863 333 222222222 221 111 1122233344444321 11 1 12
Q ss_pred HHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHH
Q 022321 253 KMRQKAWEWKKKAEAATAVGGQSYNNFDRLVKMV 286 (299)
Q Consensus 253 ~~r~~a~~l~~~~~~a~~~gg~s~~~l~~~v~~l 286 (299)
..|+.|++++...- ..++..+++..|++..
T Consensus 339 ~~r~~a~~wa~~l~----~~~dlaekLvaF~ek~ 368 (370)
T COG4394 339 EWREHAKKWANHLI----KNPDLAEKLVAFIEKI 368 (370)
T ss_pred HHHHHHHHHHHHHc----cCccHHHHHHHHHHHh
Confidence 56777777777753 3556666777777653
No 212
>PRK07525 sulfoacetaldehyde acetyltransferase; Validated
Probab=28.75 E-value=4.5e+02 Score=26.17 Aligned_cols=28 Identities=14% Similarity=0.234 Sum_probs=22.6
Q ss_pred CcceEeeccCc------chhhhhHhcCCcEEecc
Q 022321 180 SVGAFLTHCGW------NSTMESICGGVPVICWP 207 (299)
Q Consensus 180 ~v~~fItHgG~------~s~~Eal~~GvP~i~~P 207 (299)
..+++++|.|- +.+.+|...++|+|++.
T Consensus 68 ~~gv~~~t~GPG~~n~~~gi~~A~~~~~Pvl~I~ 101 (588)
T PRK07525 68 RMGMVIGQNGPGITNFVTAVATAYWAHTPVVLVT 101 (588)
T ss_pred CCEEEEEcCCccHHHHHHHHHHHhhcCCCEEEEe
Confidence 34448999884 47888999999999995
No 213
>COG2159 Predicted metal-dependent hydrolase of the TIM-barrel fold [General function prediction only]
Probab=28.66 E-value=2.8e+02 Score=25.01 Aligned_cols=92 Identities=11% Similarity=-0.001 Sum_probs=49.2
Q ss_pred hhhHhhccCCCCceEEEeecCCcccCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCcCCChhhhhhhcCCeEEEeecch
Q 022321 93 DCLKWLDKRDANSVVYVNYGSVTVMSEQHLTEFAWGLANSKRPFLWILRPDVVMGDSVVLPDEYFEEIKDRGLIVSWCNQ 172 (299)
Q Consensus 93 ~~~~wl~~~~~~~vVyvsfGS~~~~~~~~~~~l~~al~~~~~~~iw~~~~~~~~~~~~~l~~~~~~~~~~n~~v~~~~pq 172 (299)
++..+.....-+++-.-............+..+.+++++.|.++++-++.... +.+.. . ....++.=.
T Consensus 117 E~er~v~~~gf~g~~l~p~~~~~~~~~~~~~pi~~~a~~~gvpv~ihtG~~~~-------~~~~~---~--~~~~p~~~~ 184 (293)
T COG2159 117 ELERRVRELGFVGVKLHPVAQGFYPDDPRLYPIYEAAEELGVPVVIHTGAGPG-------GAGLE---K--GHSDPLYLD 184 (293)
T ss_pred HHHHHHHhcCceEEEecccccCCCCCChHHHHHHHHHHHcCCCEEEEeCCCCC-------Ccccc---c--CCCCchHHH
Confidence 44555544322333222222223344556788999999999999997664311 00000 0 000111112
Q ss_pred hhhhcCCCcceEeeccC--cchhhhh
Q 022321 173 EQVLLHPSVGAFLTHCG--WNSTMES 196 (299)
Q Consensus 173 ~~iL~~~~v~~fItHgG--~~s~~Ea 196 (299)
.-+-..|+++.++.|+| ..=..|+
T Consensus 185 ~va~~fP~l~IVl~H~G~~~p~~~~a 210 (293)
T COG2159 185 DVARKFPELKIVLGHMGEDYPWELEA 210 (293)
T ss_pred HHHHHCCCCcEEEEecCCCCchhHHH
Confidence 23556789999999999 5555555
No 214
>cd07037 TPP_PYR_MenD Pyrimidine (PYR) binding domain of 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexadiene-1-carboxylate synthase (MenD) and related proteins. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexadiene-1-carboxylate (SEPHCHC) synthase (MenD) subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. The PYR and PP domains have a common fold, but do not share strong sequence conservation. The PP domain is not included in this sub-family. Most TPP-dependent enzymes have the PYR and PP domains on the same subunit although these domains can be alternatively arranged in the primary structure. TPP-dependent enzymes are multisubunit proteins, the smallest catalytic unit being a dim
Probab=28.57 E-value=47 Score=27.16 Aligned_cols=26 Identities=23% Similarity=0.408 Sum_probs=21.4
Q ss_pred eEeeccCc------chhhhhHhcCCcEEeccC
Q 022321 183 AFLTHCGW------NSTMESICGGVPVICWPF 208 (299)
Q Consensus 183 ~fItHgG~------~s~~Eal~~GvP~i~~P~ 208 (299)
++++|+|- +.+.||...++|||++.-
T Consensus 63 v~~~t~GpG~~n~~~gl~~A~~~~~Pvl~i~g 94 (162)
T cd07037 63 AVVCTSGTAVANLLPAVVEAYYSGVPLLVLTA 94 (162)
T ss_pred EEEECCchHHHHHhHHHHHHHhcCCCEEEEEC
Confidence 38888874 478899999999999954
No 215
>PRK04885 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=28.51 E-value=51 Score=29.40 Aligned_cols=53 Identities=13% Similarity=0.195 Sum_probs=37.5
Q ss_pred CCcceEeeccCcchhhhhHh------cCCcEEeccCcCCHHHHHHHHHHHhCceEEecCCCCHHHHHHHHHHHhcCC
Q 022321 179 PSVGAFLTHCGWNSTMESIC------GGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVKRGDIEALVKEMMEGD 249 (299)
Q Consensus 179 ~~v~~fItHgG~~s~~Eal~------~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~l~~av~~ll~~~ 249 (299)
+++ +|+-||-||++.++. .++|++++... .+|..- +++.+++.+++.++++++
T Consensus 36 ~Dl--vi~iGGDGT~L~a~~~~~~~~~~iPilGIN~G--------------~lGFL~--~~~~~~~~~~l~~i~~g~ 94 (265)
T PRK04885 36 PDI--VISVGGDGTLLSAFHRYENQLDKVRFVGVHTG--------------HLGFYT--DWRPFEVDKLVIALAKDP 94 (265)
T ss_pred CCE--EEEECCcHHHHHHHHHhcccCCCCeEEEEeCC--------------Cceecc--cCCHHHHHHHHHHHHcCC
Confidence 445 999999999999975 48898887641 122221 456777888888887754
No 216
>PRK08199 thiamine pyrophosphate protein; Validated
Probab=28.42 E-value=3.4e+02 Score=26.73 Aligned_cols=27 Identities=15% Similarity=0.177 Sum_probs=22.0
Q ss_pred cceEeeccCc------chhhhhHhcCCcEEecc
Q 022321 181 VGAFLTHCGW------NSTMESICGGVPVICWP 207 (299)
Q Consensus 181 v~~fItHgG~------~s~~Eal~~GvP~i~~P 207 (299)
.+++++|.|- +.+.+|...++|+|++-
T Consensus 72 ~gv~~~t~GpG~~N~~~gi~~A~~~~~Pvl~i~ 104 (557)
T PRK08199 72 PGICFVTRGPGATNASIGVHTAFQDSTPMILFV 104 (557)
T ss_pred CEEEEeCCCccHHHHHHHHHHHhhcCCCEEEEe
Confidence 4448999884 47899999999999883
No 217
>PF00289 CPSase_L_chain: Carbamoyl-phosphate synthase L chain, N-terminal domain; InterPro: IPR005481 Carbamoyl phosphate synthase (CPSase) is a heterodimeric enzyme composed of a small and a large subunit (with the exception of CPSase III, see below). CPSase catalyses the synthesis of carbamoyl phosphate from biocarbonate, ATP and glutamine (6.3.5.5 from EC) or ammonia (6.3.4.16 from EC), and represents the first committed step in pyrimidine and arginine biosynthesis in prokaryotes and eukaryotes, and in the urea cycle in most terrestrial vertebrates [, ]. CPSase has three active sites, one in the small subunit and two in the large subunit. The small subunit contains the glutamine binding site and catalyses the hydrolysis of glutamine to glutamate and ammonia. The large subunit has two homologous carboxy phosphate domains, both of which have ATP-binding sites; however, the N-terminal carboxy phosphate domain catalyses the phosphorylation of biocarbonate, while the C-terminal domain catalyses the phosphorylation of the carbamate intermediate []. The carboxy phosphate domain found duplicated in the large subunit of CPSase is also present as a single copy in the biotin-dependent enzymes acetyl-CoA carboxylase (6.4.1.2 from EC) (ACC), propionyl-CoA carboxylase (6.4.1.3 from EC) (PCCase), pyruvate carboxylase (6.4.1.1 from EC) (PC) and urea carboxylase (6.3.4.6 from EC). Most prokaryotes carry one form of CPSase that participates in both arginine and pyrimidine biosynthesis, however certain bacteria can have separate forms. The large subunit in bacterial CPSase has four structural domains: the carboxy phosphate domain 1, the oligomerisation domain, the carbamoyl phosphate domain 2 and the allosteric domain []. CPSase heterodimers from Escherichia coli contain two molecular tunnels: an ammonia tunnel and a carbamate tunnel. These inter-domain tunnels connect the three distinct active sites, and function as conduits for the transport of unstable reaction intermediates (ammonia and carbamate) between successive active sites []. The catalytic mechanism of CPSase involves the diffusion of carbamate through the interior of the enzyme from the site of synthesis within the N-terminal domain of the large subunit to the site of phosphorylation within the C-terminal domain. Eukaryotes have two distinct forms of CPSase: a mitochondrial enzyme (CPSase I) that participates in both arginine biosynthesis and the urea cycle; and a cytosolic enzyme (CPSase II) involved in pyrimidine biosynthesis. CPSase II occurs as part of a multi-enzyme complex along with aspartate transcarbamoylase and dihydroorotase; this complex is referred to as the CAD protein []. The hepatic expression of CPSase is transcriptionally regulated by glucocorticoids and/or cAMP []. There is a third form of the enzyme, CPSase III, found in fish, which uses glutamine as a nitrogen source instead of ammonia []. CPSase III is closely related to CPSase I, and is composed of a single polypeptide that may have arisen from gene fusion of the glutaminase and synthetase domains []. This entry represents the N-terminal domain of the large subunit of carbamoyl phosphate synthase. This domain can also be found in certain other related proteins. ; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 3VA7_A 3OUU_A 3OUZ_B 1W96_B 1W93_A 1ULZ_A 3HB9_C 3HO8_A 3BG5_C 3HBL_A ....
Probab=28.29 E-value=1.1e+02 Score=23.14 Aligned_cols=68 Identities=13% Similarity=0.068 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHcCCCCEEEEEcCCCCCCCCcCCChhhhhhhcCCeEEEe-------ecchhh---hhcCCCcceEeeccC
Q 022321 120 QHLTEFAWGLANSKRPFLWILRPDVVMGDSVVLPDEYFEEIKDRGLIVS-------WCNQEQ---VLLHPSVGAFLTHCG 189 (299)
Q Consensus 120 ~~~~~l~~al~~~~~~~iw~~~~~~~~~~~~~l~~~~~~~~~~n~~v~~-------~~pq~~---iL~~~~v~~fItHgG 189 (299)
+....+++++++.|++++.+...... ....-+..+..+..+ |+.... +.... ++...|+|
T Consensus 12 eia~r~~ra~r~~Gi~tv~v~s~~d~--------~s~~~~~ad~~~~~~~~~~~~~yl~~e~I~~ia~~~--g~~~i~pG 81 (110)
T PF00289_consen 12 EIAVRIIRALRELGIETVAVNSNPDT--------VSTHVDMADEAYFEPPGPSPESYLNIEAIIDIARKE--GADAIHPG 81 (110)
T ss_dssp HHHHHHHHHHHHTTSEEEEEEEGGGT--------TGHHHHHSSEEEEEESSSGGGTTTSHHHHHHHHHHT--TESEEEST
T ss_pred HHHHHHHHHHHHhCCcceeccCchhc--------ccccccccccceecCcchhhhhhccHHHHhhHhhhh--cCcccccc
Confidence 44677899999999999988764310 111122345555444 555444 33333 34889999
Q ss_pred cchhhhhH
Q 022321 190 WNSTMESI 197 (299)
Q Consensus 190 ~~s~~Eal 197 (299)
+|-+.|..
T Consensus 82 yg~lse~~ 89 (110)
T PF00289_consen 82 YGFLSENA 89 (110)
T ss_dssp SSTTTTHH
T ss_pred cchhHHHH
Confidence 99877764
No 218
>TIGR03845 sulfopyru_alph sulfopyruvate decarboxylase, alpha subunit. This model represents the alpha subunit, or the N-terminal region, of sulfopyruvate decarboxylase, an enzyme of coenzyme M biosynthesis. Coenzyme M is found almost exclusively in the methanogenic archaea. However, the enzyme also occurs in Roseovarius nubinhibens ISM in a degradative pathway, where the resulting sulfoacetaldehyde is desulfonated to acetyl phosphate, then converted to acetyl-CoA (see PubMed:19581363).
Probab=28.23 E-value=1.2e+02 Score=24.52 Aligned_cols=25 Identities=16% Similarity=0.248 Sum_probs=18.8
Q ss_pred eEeeccCc----chhhhhH-hcCCcEEecc
Q 022321 183 AFLTHCGW----NSTMESI-CGGVPVICWP 207 (299)
Q Consensus 183 ~fItHgG~----~s~~Eal-~~GvP~i~~P 207 (299)
.+..+.|. |.+.++. ..++|+|++=
T Consensus 62 v~~~~sG~gn~~~~l~~a~~~~~~Pvl~i~ 91 (157)
T TIGR03845 62 ILMQSSGLGNSINALASLNKTYGIPLPILA 91 (157)
T ss_pred EEEeCCcHHHHHHHHHHHHHcCCCCEEEEE
Confidence 36667774 5667777 9999999976
No 219
>PRK06546 pyruvate dehydrogenase; Provisional
Probab=28.20 E-value=4.9e+02 Score=25.87 Aligned_cols=58 Identities=16% Similarity=0.226 Sum_probs=35.1
Q ss_pred EeeccCcchhh-hhHhcCCcEEeccCcCCHHHHHHHHHHHhCc-eEEecCCCCHHHHHHHHHHHhc
Q 022321 184 FLTHCGWNSTM-ESICGGVPVICWPFFAEQQTNCRYACTTWGI-GMEVNHDVKRGDIEALVKEMME 247 (299)
Q Consensus 184 fItHgG~~s~~-Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~-G~~l~~~~~~~~l~~av~~ll~ 247 (299)
++..+|++.+. +....|.+-... .....+.++.. +.+|+ +..++ +.++|.+++++.++
T Consensus 459 V~NN~~~g~i~~~q~~~~~~~~~~--~~~~~df~~lA-~a~G~~~~~v~---~~~el~~al~~a~~ 518 (578)
T PRK06546 459 VFNNSTLGMVKLEMLVDGLPDFGT--DHPPVDYAAIA-AALGIHAVRVE---DPKDVRGALREAFA 518 (578)
T ss_pred EEECCccccHHHHHHhcCCCcccc--cCCCCCHHHHH-HHCCCeeEEeC---CHHHHHHHHHHHHh
Confidence 78888888764 222233232111 12235566666 77786 44443 79999999999874
No 220
>PF03808 Glyco_tran_WecB: Glycosyl transferase WecB/TagA/CpsF family; InterPro: IPR004629 The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in Enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.; GO: 0009058 biosynthetic process
Probab=27.21 E-value=3.5e+02 Score=22.09 Aligned_cols=87 Identities=11% Similarity=0.179 Sum_probs=53.7
Q ss_pred CccEEEEcCcccccHHHHHHHHhcCCCEEEeCcccCCcccccccccccCCCCCcccchhhhHhhccCCCCceEEEeecCC
Q 022321 35 RSSAIIFNTFDEFEHAALEVIASKFPNIYTVGPLPLLCKQVDETKFRSFGSSLWKEDTDCLKWLDKRDANSVVYVNYGSV 114 (299)
Q Consensus 35 ~~~~~l~ns~~~LE~~~~~~~r~~~p~v~~VGpl~~~~~~~~~~~~~~l~~~~~~~~~~~~~wl~~~~~~~vVyvsfGS~ 114 (299)
+....|+-+.++.-..+...++...|++..+|-.+..-.. .+++.+.+.+.... ..+|+|++|+-
T Consensus 48 ~~~ifllG~~~~~~~~~~~~l~~~yP~l~ivg~~~g~f~~--------------~~~~~i~~~I~~~~-pdiv~vglG~P 112 (172)
T PF03808_consen 48 GKRIFLLGGSEEVLEKAAANLRRRYPGLRIVGYHHGYFDE--------------EEEEAIINRINASG-PDIVFVGLGAP 112 (172)
T ss_pred CCeEEEEeCCHHHHHHHHHHHHHHCCCeEEEEecCCCCCh--------------hhHHHHHHHHHHcC-CCEEEEECCCC
Confidence 3467888887766666667888888999888865432211 13456777777663 46999999874
Q ss_pred cccCHHHHHHHHHHHHcCCCCEEEEEc
Q 022321 115 TVMSEQHLTEFAWGLANSKRPFLWILR 141 (299)
Q Consensus 115 ~~~~~~~~~~l~~al~~~~~~~iw~~~ 141 (299)
. .+. -+.+-....+..++..++
T Consensus 113 k---QE~--~~~~~~~~l~~~v~i~vG 134 (172)
T PF03808_consen 113 K---QER--WIARHRQRLPAGVIIGVG 134 (172)
T ss_pred H---HHH--HHHHHHHHCCCCEEEEEC
Confidence 2 121 122233346667555555
No 221
>COG0409 HypD Hydrogenase maturation factor [Posttranslational modification, protein turnover, chaperones]
Probab=27.13 E-value=2.6e+02 Score=25.86 Aligned_cols=61 Identities=13% Similarity=0.116 Sum_probs=37.9
Q ss_pred HHhCceEEecCCCCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhc
Q 022321 221 TTWGIGMEVNHDVKRGDIEALVKEMMEGDEGKKMRQKAWEWKKKAEAATAVGGQSYNNFDRLVKMVLHQ 289 (299)
Q Consensus 221 ~~~g~G~~l~~~~~~~~l~~av~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gg~s~~~l~~~v~~l~~~ 289 (299)
++.++-+.+. .+.+.+|..+|.-++. ...++..++-...++++...|+..+ .++++++...
T Consensus 210 ~ky~~P~VVa-GFEP~DiL~~i~~ll~-----q~~~g~akv~NeY~RaV~~eGN~~A--q~~i~~vFev 270 (364)
T COG0409 210 EKYKFPIVVA-GFEPLDILLGVLMLLK-----QIIRGEAKVENEYKRAVKDEGNVKA--QELINEVFEV 270 (364)
T ss_pred HhcCCCeEEe-cCCHHHHHHHHHHHHH-----HHhcCceEEEecceeecCCCcCHHH--HHHHHHHhcc
Confidence 5556665555 4667777777766654 3444444555556666777777766 7777776544
No 222
>PLN02948 phosphoribosylaminoimidazole carboxylase
Probab=26.96 E-value=6.5e+02 Score=25.17 Aligned_cols=141 Identities=12% Similarity=0.149 Sum_probs=71.3
Q ss_pred CCceEEEeecCCcccCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCcCCChhhhhhhcCCeEEEeecchhhhhcCCCcc
Q 022321 103 ANSVVYVNYGSVTVMSEQHLTEFAWGLANSKRPFLWILRPDVVMGDSVVLPDEYFEEIKDRGLIVSWCNQEQVLLHPSVG 182 (299)
Q Consensus 103 ~~~vVyvsfGS~~~~~~~~~~~l~~al~~~~~~~iw~~~~~~~~~~~~~l~~~~~~~~~~n~~v~~~~pq~~iL~~~~v~ 182 (299)
..+.|-|-+||.+ +...+++....|+..|+.+-..+.+. ...|+.+.+-. -+. ....++
T Consensus 409 ~~~~v~i~~gs~s--d~~~~~~~~~~l~~~g~~~~~~v~sa------hr~~~~~~~~~----------~~~---~~~~~~ 467 (577)
T PLN02948 409 GTPLVGIIMGSDS--DLPTMKDAAEILDSFGVPYEVTIVSA------HRTPERMFSYA----------RSA---HSRGLQ 467 (577)
T ss_pred CCCeEEEEECchh--hHHHHHHHHHHHHHcCCCeEEEEECC------ccCHHHHHHHH----------HHH---HHCCCC
Confidence 3456777788774 55667888888888887765444321 12333322110 000 011233
Q ss_pred eEeeccCcchhhhhHhc---CCcEEeccCcCCH--HHHHH-HHHHHh--CceEEecC---CCCHHHHHHHHHHHh--cCC
Q 022321 183 AFLTHCGWNSTMESICG---GVPVICWPFFAEQ--QTNCR-YACTTW--GIGMEVNH---DVKRGDIEALVKEMM--EGD 249 (299)
Q Consensus 183 ~fItHgG~~s~~Eal~~---GvP~i~~P~~~DQ--~~na~-~v~~~~--g~G~~l~~---~~~~~~l~~av~~ll--~~~ 249 (299)
.||.=.|.-.-+-.+.+ -+|+|++|.-..- -..+- -+ .+. |+.+..-. ..+..-+. .+++ .|+
T Consensus 468 v~i~~ag~~~~l~~~~a~~t~~pvi~vp~~~~~~~g~~~l~s~-~~~p~g~pv~~v~i~~~~~aa~~a---~~i~~~~~~ 543 (577)
T PLN02948 468 VIIAGAGGAAHLPGMVASMTPLPVIGVPVKTSHLDGLDSLLSI-VQMPRGVPVATVAIGNATNAGLLA---VRMLGASDP 543 (577)
T ss_pred EEEEEcCccccchHHHhhccCCCEEEcCCCCCCCCcHHHHHHH-hcCCCCCeEEEEecCChHHHHHHH---HHHHhcCCH
Confidence 48887776544444333 4699999984321 12221 12 334 43222211 12333222 2333 344
Q ss_pred hhHHHHHHHHHHHHHHHHHHhc
Q 022321 250 EGKKMRQKAWEWKKKAEAATAV 271 (299)
Q Consensus 250 ~~~~~r~~a~~l~~~~~~a~~~ 271 (299)
.++++.+..++.+++.+.+
T Consensus 544 ---~~~~~~~~~~~~~~~~~~~ 562 (577)
T PLN02948 544 ---DLLDKMEAYQEDMRDMVLE 562 (577)
T ss_pred ---HHHHHHHHHHHHHHHHHHh
Confidence 6777777777777655443
No 223
>PRK00923 sirohydrochlorin cobaltochelatase; Reviewed
Probab=26.85 E-value=2.8e+02 Score=21.14 Aligned_cols=37 Identities=14% Similarity=-0.004 Sum_probs=24.6
Q ss_pred CceEEEeecCCcccCHHHHHHHHHHHHcC--CCCEEEEE
Q 022321 104 NSVVYVNYGSVTVMSEQHLTEFAWGLANS--KRPFLWIL 140 (299)
Q Consensus 104 ~~vVyvsfGS~~~~~~~~~~~l~~al~~~--~~~~iw~~ 140 (299)
..+|+++.||......+.+..+...+++. +..+-+.+
T Consensus 2 ~~lvlv~hGS~~~~~~~~~~~~~~~l~~~~~~~~v~~af 40 (126)
T PRK00923 2 LGLLLVGHGSRLPYNKEVVTKIAEKIKEKHPFYIVEVGF 40 (126)
T ss_pred cEEEEEeCCCCChHHHHHHHHHHHHHHHhCCCCeEEEEE
Confidence 36899999997543446678888888753 33454553
No 224
>PRK04761 ppnK inorganic polyphosphate/ATP-NAD kinase; Reviewed
Probab=26.64 E-value=54 Score=28.91 Aligned_cols=28 Identities=18% Similarity=0.217 Sum_probs=22.5
Q ss_pred CCcceEeeccCcchhhhhHh----cCCcEEeccC
Q 022321 179 PSVGAFLTHCGWNSTMESIC----GGVPVICWPF 208 (299)
Q Consensus 179 ~~v~~fItHgG~~s~~Eal~----~GvP~i~~P~ 208 (299)
+++ +|+-||-||++.++. .++|++++-.
T Consensus 26 ~Dl--vi~iGGDGTlL~a~~~~~~~~~PvlGIN~ 57 (246)
T PRK04761 26 ADV--IVALGGDGFMLQTLHRYMNSGKPVYGMNR 57 (246)
T ss_pred CCE--EEEECCCHHHHHHHHHhcCCCCeEEEEeC
Confidence 455 999999999998855 4689888765
No 225
>PRK09107 acetolactate synthase 3 catalytic subunit; Validated
Probab=26.55 E-value=4.9e+02 Score=26.02 Aligned_cols=59 Identities=17% Similarity=0.304 Sum_probs=35.0
Q ss_pred EeeccCcchhhhh--HhcCCcEEeccCcCCHHHHHHHHHHHhCc-eEEecCCCCHHHHHHHHHHHhc
Q 022321 184 FLTHCGWNSTMES--ICGGVPVICWPFFAEQQTNCRYACTTWGI-GMEVNHDVKRGDIEALVKEMME 247 (299)
Q Consensus 184 fItHgG~~s~~Ea--l~~GvP~i~~P~~~DQ~~na~~v~~~~g~-G~~l~~~~~~~~l~~av~~ll~ 247 (299)
++..+||+.+... +.+|-+.-.. .....++.++.. +.+|+ |.++. +.++|.+++++.+.
T Consensus 481 V~NN~~y~~i~~~q~~~~~~~~~~~-~~~~~~d~~~lA-~a~G~~~~~v~---~~~el~~al~~a~~ 542 (595)
T PRK09107 481 ILNNQYMGMVRQWQQLLHGNRLSHS-YTEAMPDFVKLA-EAYGAVGIRCE---KPGDLDDAIQEMID 542 (595)
T ss_pred EEeCCccHHHHHHHHHHhCCccccc-cCCCCCCHHHHH-HHCCCeEEEEC---CHHHHHHHHHHHHh
Confidence 7888888876533 3344321111 111134566666 76664 44444 78999999999874
No 226
>PRK08155 acetolactate synthase catalytic subunit; Validated
Probab=26.01 E-value=2.3e+02 Score=27.96 Aligned_cols=27 Identities=11% Similarity=0.346 Sum_probs=21.8
Q ss_pred cceEeeccCc------chhhhhHhcCCcEEecc
Q 022321 181 VGAFLTHCGW------NSTMESICGGVPVICWP 207 (299)
Q Consensus 181 v~~fItHgG~------~s~~Eal~~GvP~i~~P 207 (299)
.+++++|.|- +++.+|...++|+|++-
T Consensus 77 ~gv~~~t~GpG~~N~l~gl~~A~~~~~Pvl~i~ 109 (564)
T PRK08155 77 PAVCMACSGPGATNLVTAIADARLDSIPLVCIT 109 (564)
T ss_pred CeEEEECCCCcHHHHHHHHHHHHhcCCCEEEEe
Confidence 3448888774 47899999999999985
No 227
>PRK14076 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=26.01 E-value=1.1e+02 Score=30.64 Aligned_cols=53 Identities=13% Similarity=0.421 Sum_probs=38.7
Q ss_pred cceEeeccCcchhhhhHh----cCCcEEeccCcCCHHHHHHHHHHHhCceEEecCCCCHHHHHHHHHHHhcCC
Q 022321 181 VGAFLTHCGWNSTMESIC----GGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVKRGDIEALVKEMMEGD 249 (299)
Q Consensus 181 v~~fItHgG~~s~~Eal~----~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~l~~av~~ll~~~ 249 (299)
+..+|+-||-||++.+.. .++|++++-+.. +|. +. +++.+++.+++.++++++
T Consensus 349 ~dlvi~lGGDGT~L~aa~~~~~~~~PilGin~G~--------------lGF-L~-~~~~~~~~~~l~~~~~g~ 405 (569)
T PRK14076 349 ISHIISIGGDGTVLRASKLVNGEEIPIICINMGT--------------VGF-LT-EFSKEEIFKAIDSIISGE 405 (569)
T ss_pred CCEEEEECCcHHHHHHHHHhcCCCCCEEEEcCCC--------------CCc-Cc-ccCHHHHHHHHHHHHcCC
Confidence 344999999999999966 478888876521 222 11 567888899999988764
No 228
>cd03409 Chelatase_Class_II Class II Chelatase: a family of ATP-independent monomeric or homodimeric enzymes that catalyze the insertion of metal into protoporphyrin rings. This family includes protoporphyrin IX ferrochelatase (HemH), sirohydrochlorin ferrochelatase (SirB) and the cobaltochelatases, CbiK and CbiX. HemH and SirB are involved in heme and siroheme biosynthesis, respectively, while the cobaltochelatases are associated with cobalamin biosynthesis. Excluded from this family are the ATP-dependent heterotrimeric chelatases (class I) and the multifunctional homodimeric enzymes with dehydrogenase and chelatase activities (class III).
Probab=26.00 E-value=2.5e+02 Score=20.09 Aligned_cols=36 Identities=22% Similarity=0.227 Sum_probs=23.9
Q ss_pred eEEEeecCCcc-cCHHHHHHHHHHHHcC--CCCEEEEEc
Q 022321 106 VVYVNYGSVTV-MSEQHLTEFAWGLANS--KRPFLWILR 141 (299)
Q Consensus 106 vVyvsfGS~~~-~~~~~~~~l~~al~~~--~~~~iw~~~ 141 (299)
+|+++.||-.. ...+.+..+++.+++. +..+.+.+.
T Consensus 2 lllv~HGs~~~s~~~~~~~~~~~~l~~~~~~~~v~~a~~ 40 (101)
T cd03409 2 LLVVGHGSPYKDPYKKDIEAQAHNLAESLPDFPYYVGFQ 40 (101)
T ss_pred EEEEECCCCCCccHHHHHHHHHHHHHHHCCCCCEEEEEE
Confidence 78999999854 4456677788887653 345555544
No 229
>PRK08979 acetolactate synthase 3 catalytic subunit; Validated
Probab=25.43 E-value=4e+02 Score=26.41 Aligned_cols=59 Identities=8% Similarity=0.089 Sum_probs=34.8
Q ss_pred EeeccCcchhhhh--HhcCCcEEeccCcCCHHHHHHHHHHHhCc-eEEecCCCCHHHHHHHHHHHhc
Q 022321 184 FLTHCGWNSTMES--ICGGVPVICWPFFAEQQTNCRYACTTWGI-GMEVNHDVKRGDIEALVKEMME 247 (299)
Q Consensus 184 fItHgG~~s~~Ea--l~~GvP~i~~P~~~DQ~~na~~v~~~~g~-G~~l~~~~~~~~l~~av~~ll~ 247 (299)
++..+|++.+... ..++-+.... .+...++.++.. +.+|+ |.++. +.++|..++++.+.
T Consensus 472 V~NN~~y~~i~~~q~~~~~~~~~~~-~~~~~~d~~~~A-~a~G~~~~~v~---~~~eL~~al~~a~~ 533 (572)
T PRK08979 472 NLNNRFLGMVKQWQDMIYQGRHSHS-YMDSVPDFAKIA-EAYGHVGIRIS---DPDELESGLEKALA 533 (572)
T ss_pred EEeCCccHHHHHHHHHHhCCccccc-CCCCCCCHHHHH-HHCCCeEEEEC---CHHHHHHHHHHHHh
Confidence 7788888876532 2223222111 111124566666 77776 55554 78999999998875
No 230
>TIGR02482 PFKA_ATP 6-phosphofructokinase. 6-phosphofructokinase (EC 2.7.1.11) catalyzes the addition of phosphate from ATP to fructose 6-phosphate to give fructose 1,6-bisphosphate. This represents a key control step in glycolysis. This model hits bacterial ATP-dependent 6-phosphofructokinases which lack a beta-hairpin loop present in TIGR02483 family members. TIGR02483 contains members that are ATP-dependent as well as members that are pyrophosphate-dependent. TIGR02477 represents the pyrophosphate-dependent phosphofructokinase, diphosphate--fructose-6-phosphate 1-phosphotransferase (EC 2.7.1.90).
Probab=25.05 E-value=73 Score=28.98 Aligned_cols=37 Identities=24% Similarity=0.259 Sum_probs=30.4
Q ss_pred hhcCCCcceEeeccCcchhhhhHh----cCCcEEeccCcCC
Q 022321 175 VLLHPSVGAFLTHCGWNSTMESIC----GGVPVICWPFFAE 211 (299)
Q Consensus 175 iL~~~~v~~fItHgG~~s~~Eal~----~GvP~i~~P~~~D 211 (299)
.|..-++..+|.=||.+|..-+.. .++|+|++|-.-|
T Consensus 86 ~l~~~~Id~Li~IGGdgs~~~a~~L~e~~~i~vigiPkTID 126 (301)
T TIGR02482 86 NLKKLGIEGLVVIGGDGSYTGAQKLYEEGGIPVIGLPGTID 126 (301)
T ss_pred HHHHcCCCEEEEeCCchHHHHHHHHHHhhCCCEEeeccccc
Confidence 567778888999999999876643 7999999998655
No 231
>PRK03501 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=24.69 E-value=1.8e+02 Score=25.84 Aligned_cols=54 Identities=7% Similarity=0.180 Sum_probs=37.1
Q ss_pred CCcceEeeccCcchhhhhHhc-----CCcEEeccCcCCHHHHHHHHHHHhCceEEecCCCCHHHHHHHHHHHhcCC
Q 022321 179 PSVGAFLTHCGWNSTMESICG-----GVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVKRGDIEALVKEMMEGD 249 (299)
Q Consensus 179 ~~v~~fItHgG~~s~~Eal~~-----GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~l~~av~~ll~~~ 249 (299)
+++ +|+=||-||++.++.. .+|++++-..+ .+|.. .+++.+++.+++.++++++
T Consensus 40 ~D~--vi~lGGDGT~L~a~~~~~~~~~~pilgIn~~G-------------~lGFL--~~~~~~~~~~~l~~i~~g~ 98 (264)
T PRK03501 40 ANI--IVSIGGDGTFLQAVRKTGFREDCLYAGISTKD-------------QLGFY--CDFHIDDLDKMIQAITKEE 98 (264)
T ss_pred ccE--EEEECCcHHHHHHHHHhcccCCCeEEeEecCC-------------CCeEc--ccCCHHHHHHHHHHHHcCC
Confidence 455 9999999999999863 56766655410 12322 1567788888888888764
No 232
>TIGR00173 menD 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase. 2-oxoglutarate decarboxylase/SHCHC synthase (menD) is a thiamine pyrophosphate enzyme involved in menaquinone biosynthesis.
Probab=24.56 E-value=1.6e+02 Score=28.07 Aligned_cols=25 Identities=28% Similarity=0.423 Sum_probs=20.9
Q ss_pred ceEeeccCc------chhhhhHhcCCcEEec
Q 022321 182 GAFLTHCGW------NSTMESICGGVPVICW 206 (299)
Q Consensus 182 ~~fItHgG~------~s~~Eal~~GvP~i~~ 206 (299)
+++++|+|- +.+.+|.+.++|+|++
T Consensus 65 gv~~~t~GpG~~N~l~gl~~A~~~~~Pvl~i 95 (432)
T TIGR00173 65 VAVVCTSGTAVANLLPAVIEASYSGVPLIVL 95 (432)
T ss_pred EEEEECCcchHhhhhHHHHHhcccCCcEEEE
Confidence 338888884 4788999999999999
No 233
>PF10083 DUF2321: Uncharacterized protein conserved in bacteria (DUF2321); InterPro: IPR016891 This entry is represented by Bacteriophage 'Lactobacillus prophage Lj928', Orf-Ljo1454. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=24.32 E-value=1.9e+02 Score=23.56 Aligned_cols=74 Identities=11% Similarity=0.141 Sum_probs=47.7
Q ss_pred ccCcCCHHHHHHHHHHHhCceEEecCCCCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHH
Q 022321 206 WPFFAEQQTNCRYACTTWGIGMEVNHDVKRGDIEALVKEMMEGDEGKKMRQKAWEWKKKAEAATAVGGQSYNNFDRLVKM 285 (299)
Q Consensus 206 ~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~l~~av~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gg~s~~~l~~~v~~ 285 (299)
.|+...+-.+|+.++++ .-++ . .-..+.+.+.+.+++.|. .+-+..+.++++.+.++ |......+.+++-+
T Consensus 78 yPWt~~~L~aa~el~ee-~eeL--s-~deke~~~~sl~dL~~d~--PkT~vA~~rfKk~~~K~---g~~v~~~~~dIlVd 148 (158)
T PF10083_consen 78 YPWTENALEAANELIEE-DEEL--S-PDEKEQFKESLPDLTKDT--PKTKVAATRFKKILSKA---GSIVGDAIRDILVD 148 (158)
T ss_pred CchHHHHHHHHHHHHHH-hhcC--C-HHHHHHHHhhhHHHhhcC--CccHHHHHHHHHHHHHH---hHHHHHHHHHHHHH
Confidence 67777788888877332 1111 1 235678889999988753 26777888888887655 44445555666655
Q ss_pred HHh
Q 022321 286 VLH 288 (299)
Q Consensus 286 l~~ 288 (299)
+.+
T Consensus 149 v~S 151 (158)
T PF10083_consen 149 VAS 151 (158)
T ss_pred HHH
Confidence 544
No 234
>TIGR01498 folK 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase. This model describes the folate biosynthesis enzyme 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase. Alternate names include 6-hydroxymethyl-7,8-dihydropterin diphosphokinase and 7,8-dihydro-6-hydroxymethylpterin pyrophosphokinase (HPPK). The extreme C-terminal region, of typically eight to thirty residues, is not included in the model. This enzyme may be found as a fusion protein with other enzymes of folate biosynthesis.
Probab=23.63 E-value=1e+02 Score=24.06 Aligned_cols=28 Identities=21% Similarity=0.097 Sum_probs=20.0
Q ss_pred EEEeecCCcccCHHHHHHHHHHHHcCCC
Q 022321 107 VYVNYGSVTVMSEQHLTEFAWGLANSKR 134 (299)
Q Consensus 107 VyvsfGS~~~~~~~~~~~l~~al~~~~~ 134 (299)
+|+++||....+.+.+...+..|.+.+.
T Consensus 1 ~~i~lGSN~g~~~~~l~~A~~~L~~~~~ 28 (127)
T TIGR01498 1 AYIALGSNLGDRLKNLRAALAALAALPV 28 (127)
T ss_pred CEEEEeCCcHhHHHHHHHHHHHHhcCCc
Confidence 5899999875555667777777766543
No 235
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.
Probab=23.61 E-value=3.4e+02 Score=25.00 Aligned_cols=37 Identities=24% Similarity=0.321 Sum_probs=27.9
Q ss_pred ceEEEeecCCcccCHHHHHHHHHHHHcCCCCEEEEEcCC
Q 022321 105 SVVYVNYGSVTVMSEQHLTEFAWGLANSKRPFLWILRPD 143 (299)
Q Consensus 105 ~vVyvsfGS~~~~~~~~~~~l~~al~~~~~~~iw~~~~~ 143 (299)
.|+++++|+.+. ..-+..++++|.+.|++|.+.....
T Consensus 2 rIl~~~~p~~GH--v~P~l~la~~L~~rGh~V~~~t~~~ 38 (401)
T cd03784 2 RVLITTIGSRGD--VQPLVALAWALRAAGHEVRVATPPE 38 (401)
T ss_pred eEEEEeCCCcch--HHHHHHHHHHHHHCCCeEEEeeCHh
Confidence 378888887653 3446678899999999999887753
No 236
>PRK15424 propionate catabolism operon regulatory protein PrpR; Provisional
Probab=23.26 E-value=2.3e+02 Score=28.08 Aligned_cols=29 Identities=21% Similarity=0.105 Sum_probs=23.6
Q ss_pred cceEeeccCcchhhhhHhcCCcEEeccCcC
Q 022321 181 VGAFLTHCGWNSTMESICGGVPVICWPFFA 210 (299)
Q Consensus 181 v~~fItHgG~~s~~Eal~~GvP~i~~P~~~ 210 (299)
++++|+.||....... ...+|+|-++..+
T Consensus 65 ~dviIsrG~ta~~i~~-~~~iPVv~i~~s~ 93 (538)
T PRK15424 65 CDAIIAAGSNGAYLKS-RLSVPVILIKPSG 93 (538)
T ss_pred CcEEEECchHHHHHHh-hCCCCEEEecCCH
Confidence 3449999999998888 4579999999843
No 237
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=23.22 E-value=5e+02 Score=23.13 Aligned_cols=34 Identities=18% Similarity=0.093 Sum_probs=21.7
Q ss_pred EEEeecCCcccCHHHHHHHHHHHHcCCCCEEEEEc
Q 022321 107 VYVNYGSVTVMSEQHLTEFAWGLANSKRPFLWILR 141 (299)
Q Consensus 107 VyvsfGS~~~~~~~~~~~l~~al~~~~~~~iw~~~ 141 (299)
||++-|.... .......+++.|.+.|+.+.+..+
T Consensus 3 i~~~~g~~~g-~~~~~~~La~~L~~~g~eV~vv~~ 36 (348)
T TIGR01133 3 VVLAAGGTGG-HIFPALAVAEELIKRGVEVLWLGT 36 (348)
T ss_pred EEEEeCccHH-HHhHHHHHHHHHHhCCCEEEEEeC
Confidence 5555555431 122345789999998888777665
No 238
>PF06204 CBM_X: Putative carbohydrate binding domain ; InterPro: IPR009342 This domain is conserved in enzymes that have carbohydrates as substrate, and may be a carbohydrate-binding domain.; PDB: 3ACT_B 2CQT_A 3QFY_B 3QFZ_A 2CQS_A 3QG0_B 3AFJ_A 3ACS_A 1V7V_A 1V7X_A ....
Probab=23.13 E-value=35 Score=23.49 Aligned_cols=22 Identities=27% Similarity=0.294 Sum_probs=17.0
Q ss_pred cchhhhhcCCCcceEeeccCcc
Q 022321 170 CNQEQVLLHPSVGAFLTHCGWN 191 (299)
Q Consensus 170 ~pq~~iL~~~~v~~fItHgG~~ 191 (299)
.|...+|+....+.+||+.|.|
T Consensus 25 ~P~~n~LsNg~y~~mvt~~G~G 46 (66)
T PF06204_consen 25 APWVNVLSNGSYGVMVTNSGSG 46 (66)
T ss_dssp S--EEEE-SSSEEEEEETTSBE
T ss_pred CCEEEEeeCCcEEEEEcCCCce
Confidence 4677799999999999999986
No 239
>PRK03708 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=23.09 E-value=68 Score=28.77 Aligned_cols=52 Identities=13% Similarity=0.209 Sum_probs=35.2
Q ss_pred ceEeeccCcchhhhhH---hcCCcEEeccCcCCHHHHHHHHHHHhCceEEecCCCCHHHHHHHHHHHhcCC
Q 022321 182 GAFLTHCGWNSTMESI---CGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVKRGDIEALVKEMMEGD 249 (299)
Q Consensus 182 ~~fItHgG~~s~~Eal---~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~l~~av~~ll~~~ 249 (299)
..+|+-||-||+++++ ..++|++++|... . |..- .++.+++.+++.++++++
T Consensus 59 d~vi~iGGDGTlL~a~~~~~~~~pi~gIn~G~------------l--GFl~--~~~~~~~~~~l~~i~~g~ 113 (277)
T PRK03708 59 DFIIAIGGDGTILRIEHKTKKDIPILGINMGT------------L--GFLT--EVEPEETFFALSRLLEGD 113 (277)
T ss_pred CEEEEEeCcHHHHHHHHhcCCCCeEEEEeCCC------------C--Cccc--cCCHHHHHHHHHHHHcCC
Confidence 3499999999999987 3467888888632 1 1111 345677777777777654
No 240
>TIGR02329 propionate_PrpR propionate catabolism operon regulatory protein PrpR. At least five distinct pathways exists for the catabolism of propionate by way of propionyl-CoA. Members of this family represent the transcriptional regulatory protein PrpR, whose gene is found in most cases divergently transcribed from an operon for the methylcitric acid cycle of propionate catabolism. 2-methylcitric acid, a catabolite by this pathway, is a coactivator of PrpR.
Probab=22.58 E-value=2.6e+02 Score=27.66 Aligned_cols=30 Identities=13% Similarity=0.051 Sum_probs=23.7
Q ss_pred CcceEeeccCcchhhhhHhcCCcEEeccCcC
Q 022321 180 SVGAFLTHCGWNSTMESICGGVPVICWPFFA 210 (299)
Q Consensus 180 ~v~~fItHgG~~s~~Eal~~GvP~i~~P~~~ 210 (299)
.++++|+.||....... ...+|+|-++..+
T Consensus 54 ~~dviIsrG~ta~~i~~-~~~iPVv~i~~s~ 83 (526)
T TIGR02329 54 RCDVVVAGGSNGAYLKS-RLSLPVIVIKPTG 83 (526)
T ss_pred CCcEEEECchHHHHHHH-hCCCCEEEecCCh
Confidence 34449999999888887 4579999999843
No 241
>TIGR00147 lipid kinase, YegS/Rv2252/BmrU family. The E. coli member of this family, YegS has been purified and shown to have phosphatidylglycerol kinase activity. The member from M. tuberculosis, Rv2252, has diacylglycerol kinase activity. BmrU from B. subtilis is in an operon with multidrug efflux transporter Bmr, but is uncharacterized.
Probab=22.45 E-value=1.9e+02 Score=25.72 Aligned_cols=27 Identities=15% Similarity=0.326 Sum_probs=20.1
Q ss_pred ceEeeccCcchhhhhHhc-----CCcEEe-ccC
Q 022321 182 GAFLTHCGWNSTMESICG-----GVPVIC-WPF 208 (299)
Q Consensus 182 ~~fItHgG~~s~~Eal~~-----GvP~i~-~P~ 208 (299)
+.+|.-||-||+.|++.. ..|.++ +|.
T Consensus 59 d~ivv~GGDGTl~~v~~~l~~~~~~~~lgiiP~ 91 (293)
T TIGR00147 59 DTVIAGGGDGTINEVVNALIQLDDIPALGILPL 91 (293)
T ss_pred CEEEEECCCChHHHHHHHHhcCCCCCcEEEEcC
Confidence 349999999999996542 455555 897
No 242
>PLN02859 glutamine-tRNA ligase
Probab=22.20 E-value=1.4e+02 Score=30.90 Aligned_cols=43 Identities=26% Similarity=0.414 Sum_probs=31.6
Q ss_pred HHhCceEEecCCCCHHHHHHHHHHHhcCCh----hHHHHHHHHHHHHHHHH
Q 022321 221 TTWGIGMEVNHDVKRGDIEALVKEMMEGDE----GKKMRQKAWEWKKKAEA 267 (299)
Q Consensus 221 ~~~g~G~~l~~~~~~~~l~~av~~ll~~~~----~~~~r~~a~~l~~~~~~ 267 (299)
++.|+|+.+ |+++|.++|.++++... .+.|+.|...+-..+|+
T Consensus 111 k~CGVGV~V----T~EqI~~~V~~~i~~~k~~il~~RY~~n~g~ll~~~r~ 157 (788)
T PLN02859 111 EACGVGVVV----SPEDIEAAVNEVFEENKEKILEQRYRTNVGDLLGQVRK 157 (788)
T ss_pred HhCCCCEEE----CHHHHHHHHHHHHHhhHHHHHHhcccccHHHHHHHHHh
Confidence 778999976 79999999999987542 13566666666666664
No 243
>PRK11914 diacylglycerol kinase; Reviewed
Probab=22.12 E-value=4.9e+02 Score=23.24 Aligned_cols=26 Identities=15% Similarity=0.171 Sum_probs=22.2
Q ss_pred eEeeccCcchhhhhH----hcCCcEEeccC
Q 022321 183 AFLTHCGWNSTMESI----CGGVPVICWPF 208 (299)
Q Consensus 183 ~fItHgG~~s~~Eal----~~GvP~i~~P~ 208 (299)
.+|--||-||+.|++ ..++|+-++|.
T Consensus 67 ~vvv~GGDGTi~evv~~l~~~~~~lgiiP~ 96 (306)
T PRK11914 67 ALVVVGGDGVISNALQVLAGTDIPLGIIPA 96 (306)
T ss_pred EEEEECCchHHHHHhHHhccCCCcEEEEeC
Confidence 399999999999987 34789999997
No 244
>TIGR00624 tag DNA-3-methyladenine glycosylase I. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=21.93 E-value=2.4e+02 Score=23.59 Aligned_cols=45 Identities=13% Similarity=0.135 Sum_probs=32.5
Q ss_pred eccCcCCHHHHHHHHHHHhCceEEecC-------------CCCHHHH----HHHHHHHhcCC
Q 022321 205 CWPFFAEQQTNCRYACTTWGIGMEVNH-------------DVKRGDI----EALVKEMMEGD 249 (299)
Q Consensus 205 ~~P~~~DQ~~na~~v~~~~g~G~~l~~-------------~~~~~~l----~~av~~ll~~~ 249 (299)
+.|.+.||.......-+-+.+|+.-.. .++.+.+ .+-|.++|.|+
T Consensus 21 G~p~~dd~~LFE~L~Le~fQAGLSW~tIL~Kr~~fr~aF~~Fd~~~VA~~~e~~ie~L~~d~ 82 (179)
T TIGR00624 21 GVPLRDSVALFERMSLEGFQAGLSWITVLRKRENYRRAFSGFDIVKVARMTDADVERLLQDD 82 (179)
T ss_pred CCcCcCCHHHHHHHHHHHHhCcCCHHHHHHhHHHHHHHHcCCCHHHHhCCCHHHHHHHhcCc
Confidence 567789999988777688888887632 3566555 35677788887
No 245
>cd00763 Bacterial_PFK Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate. The members belong to a subfamily of the PFKA family (cd00363) and include bacterial ATP-dependent phosphofructokinases. These are allosrterically regulated homotetramers; the subunits are of about 320 amino acids.
Probab=21.68 E-value=97 Score=28.42 Aligned_cols=38 Identities=21% Similarity=0.261 Sum_probs=30.8
Q ss_pred hhhcCCCcceEeeccCcchhhhhHh---cCCcEEeccCcCC
Q 022321 174 QVLLHPSVGAFLTHCGWNSTMESIC---GGVPVICWPFFAE 211 (299)
Q Consensus 174 ~iL~~~~v~~fItHgG~~s~~Eal~---~GvP~i~~P~~~D 211 (299)
+.|..-++..+|.=||-+|..-|.. +|+|+|++|-.-|
T Consensus 86 ~~l~~~~Id~Li~IGGdgs~~~a~~L~e~~i~vigiPkTID 126 (317)
T cd00763 86 EQLKKHGIDALVVIGGDGSYMGAMRLTEHGFPCVGLPGTID 126 (317)
T ss_pred HHHHHcCCCEEEEECCchHHHHHHHHHHcCCCEEEeccccc
Confidence 3577788888999999998877644 5999999998554
No 246
>TIGR00118 acolac_lg acetolactate synthase, large subunit, biosynthetic type. Several isozymes of this enzyme are found in E. coli K12, one of which contains a frameshift in the large subunit gene and is not expressed.
Probab=21.19 E-value=7e+02 Score=24.49 Aligned_cols=59 Identities=14% Similarity=0.182 Sum_probs=32.8
Q ss_pred EeeccCcchhhhh--HhcCCcEEeccCcCCHHHHHHHHHHHhCc-eEEecCCCCHHHHHHHHHHHhc
Q 022321 184 FLTHCGWNSTMES--ICGGVPVICWPFFAEQQTNCRYACTTWGI-GMEVNHDVKRGDIEALVKEMME 247 (299)
Q Consensus 184 fItHgG~~s~~Ea--l~~GvP~i~~P~~~DQ~~na~~v~~~~g~-G~~l~~~~~~~~l~~av~~ll~ 247 (299)
++..+|++++... ..++-+.... .+..+++.++.+ +.+|+ |..+. +.+++.+++++.++
T Consensus 463 v~NN~~~~~~~~~q~~~~~~~~~~~-~~~~~~d~~~~a-~a~G~~~~~v~---~~~~l~~al~~a~~ 524 (558)
T TIGR00118 463 ILNNRYLGMVRQWQELFYEERYSHT-HMGSLPDFVKLA-EAYGIKGIRIE---KPEELDEKLKEALS 524 (558)
T ss_pred EEeCCchHHHHHHHHHhcCCceeec-cCCCCCCHHHHH-HHCCCeEEEEC---CHHHHHHHHHHHHh
Confidence 6778888766422 1122222221 111245566665 77775 33333 68889999888774
No 247
>PF11740 KfrA_N: Plasmid replication region DNA-binding N-term; InterPro: IPR021104 The KfrA family of protiens are encoded on plasmids, generally in or near gene clusters invloved in stable inheritance functions. These proteins are thought to form an all-helical structure, consisting of an N-terminal helix-turn-helix DNA binding domain and an extended coiled-coil tail. The best-characterised KfrA protein, encoded on the broad host-range Plasmid RK2, is a site-specific DNA-binding protein whose operator overlaps its own promoter. The DNA-binding domain is essential for function, while the coiled-coil domain is probably responsible for formation of multimers, and may provide an example of a bridge to host structures required for plasmid partitioning []. This entry represents the N-terminal DNA-binding domain.
Probab=21.17 E-value=2e+02 Score=21.75 Aligned_cols=49 Identities=12% Similarity=0.261 Sum_probs=29.5
Q ss_pred CCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhcCC
Q 022321 233 VKRGDIEALVKEMMEGDEGKKMRQKAWEWKKKAEAATAVGGQSYNNFDRLVKMVLHQGN 291 (299)
Q Consensus 233 ~~~~~l~~av~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gg~s~~~l~~~v~~l~~~~~ 291 (299)
+|.+.|..+..+++.... +-.+..+++.+ |+.|...+..+++.+.....
T Consensus 1 IT~e~V~~Aa~~L~~~G~----~pT~~~Vr~~l------G~GS~~ti~~~l~~w~~~~~ 49 (120)
T PF11740_consen 1 ITYEDVIEAADELLAAGK----KPTVRAVRERL------GGGSMSTISKHLKEWREERE 49 (120)
T ss_pred CcHHHHHHHHHHHHHcCC----CCCHHHHHHHH------CCCCHHHHHHHHHHHHHhhh
Confidence 466777778777775431 33555555554 44556667777777665543
No 248
>TIGR03457 sulphoacet_xsc sulfoacetaldehyde acetyltransferase. Members of this protein family are sulfoacetaldehyde acetyltransferase, an enzyme of taurine utilization. Taurine, or 2-aminoethanesulfonate, can be used by bacteria as a source of carbon, nitrogen, and sulfur.
Probab=21.06 E-value=6.2e+02 Score=25.09 Aligned_cols=27 Identities=11% Similarity=0.166 Sum_probs=22.0
Q ss_pred cceEeeccCcc------hhhhhHhcCCcEEecc
Q 022321 181 VGAFLTHCGWN------STMESICGGVPVICWP 207 (299)
Q Consensus 181 v~~fItHgG~~------s~~Eal~~GvP~i~~P 207 (299)
.+++++|.|-| .+.+|...++|+|++.
T Consensus 65 ~gv~~~t~GPG~~N~~~gla~A~~~~~Pvl~I~ 97 (579)
T TIGR03457 65 MSMVIGQNGPGVTNCVTAIAAAYWAHTPVVIVT 97 (579)
T ss_pred CEEEEECCCchHHHHHHHHHHHhhcCCCEEEEe
Confidence 34488888854 7789999999999995
No 249
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=20.89 E-value=2.8e+02 Score=22.68 Aligned_cols=103 Identities=14% Similarity=0.115 Sum_probs=58.4
Q ss_pred CCceEEEeecCCcccCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCcCCChhhhhhhcCCeEEEeecchhhhhcCCCcc
Q 022321 103 ANSVVYVNYGSVTVMSEQHLTEFAWGLANSKRPFLWILRPDVVMGDSVVLPDEYFEEIKDRGLIVSWCNQEQVLLHPSVG 182 (299)
Q Consensus 103 ~~~vVyvsfGS~~~~~~~~~~~l~~al~~~~~~~iw~~~~~~~~~~~~~l~~~~~~~~~~n~~v~~~~pq~~iL~~~~v~ 182 (299)
.+.+..+.+|.++ +.+++.++..|.+++..-+.. .... ..... ...+.+-.++++.+++
T Consensus 36 g~tvgIiG~G~IG-------~~vA~~l~~fG~~V~~~d~~~----------~~~~-~~~~~--~~~~~~l~ell~~aDi- 94 (178)
T PF02826_consen 36 GKTVGIIGYGRIG-------RAVARRLKAFGMRVIGYDRSP----------KPEE-GADEF--GVEYVSLDELLAQADI- 94 (178)
T ss_dssp TSEEEEESTSHHH-------HHHHHHHHHTT-EEEEEESSC----------HHHH-HHHHT--TEEESSHHHHHHH-SE-
T ss_pred CCEEEEEEEcCCc-------CeEeeeeecCCceeEEecccC----------Chhh-hcccc--cceeeehhhhcchhhh-
Confidence 4567888888875 456666777888876654422 1100 00111 1256677889999998
Q ss_pred eEeeccCcchhhhhHhcCCcEEeccCcCCHHHHHHHHHHHhCceEE-ecC----CCCHHHHHHHHHH
Q 022321 183 AFLTHCGWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGME-VNH----DVKRGDIEALVKE 244 (299)
Q Consensus 183 ~fItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~-l~~----~~~~~~l~~av~~ 244 (299)
++.|+-.+. ...+..|+..+ ..++-|.. ++. .++.+.+.++++.
T Consensus 95 -v~~~~plt~----------------~T~~li~~~~l-~~mk~ga~lvN~aRG~~vde~aL~~aL~~ 143 (178)
T PF02826_consen 95 -VSLHLPLTP----------------ETRGLINAEFL-AKMKPGAVLVNVARGELVDEDALLDALES 143 (178)
T ss_dssp -EEE-SSSST----------------TTTTSBSHHHH-HTSTTTEEEEESSSGGGB-HHHHHHHHHT
T ss_pred -hhhhhcccc----------------ccceeeeeeee-eccccceEEEeccchhhhhhhHHHHHHhh
Confidence 888764331 12455677777 66665533 332 4677777766653
No 250
>TIGR02483 PFK_mixed phosphofructokinase. Members of this family that are characterized, save one, are phosphofructokinases dependent on pyrophosphate (EC 2.7.1.90) rather than ATP (EC 2.7.1.11). The exception is one of three phosphofructokinases from Streptomyces coelicolor. Family members are both bacterial and archaeal.
Probab=20.76 E-value=1e+02 Score=28.29 Aligned_cols=38 Identities=18% Similarity=0.148 Sum_probs=30.8
Q ss_pred hhhcCCCcceEeeccCcchhhhhHh---cCCcEEeccCcCC
Q 022321 174 QVLLHPSVGAFLTHCGWNSTMESIC---GGVPVICWPFFAE 211 (299)
Q Consensus 174 ~iL~~~~v~~fItHgG~~s~~Eal~---~GvP~i~~P~~~D 211 (299)
+.|..-++..+|.=||-+|..-|.. .|+|+|++|-..|
T Consensus 88 ~~l~~~~Id~LivIGGdgS~~~a~~L~~~gi~vigiPkTID 128 (324)
T TIGR02483 88 ANLKELGLDALIAIGGDGTLGIARRLADKGLPVVGVPKTID 128 (324)
T ss_pred HHHHHcCCCEEEEECCchHHHHHHHHHhcCCCEEeeccccC
Confidence 3566778888999999999877744 6999999998554
No 251
>PRK07092 benzoylformate decarboxylase; Reviewed
Probab=20.55 E-value=3.4e+02 Score=26.58 Aligned_cols=25 Identities=8% Similarity=0.062 Sum_probs=21.3
Q ss_pred eEeeccCcc------hhhhhHhcCCcEEecc
Q 022321 183 AFLTHCGWN------STMESICGGVPVICWP 207 (299)
Q Consensus 183 ~fItHgG~~------s~~Eal~~GvP~i~~P 207 (299)
++++|+|-| ++.+|...++|+|++.
T Consensus 76 v~~vt~gpG~~N~~~gia~A~~~~~Pvl~i~ 106 (530)
T PRK07092 76 FVNLHSAAGVGNAMGNLFTAFKNHTPLVITA 106 (530)
T ss_pred EEEeccCchHHHHHHHHHHHhhcCCCEEEEe
Confidence 388888855 8999999999999984
No 252
>PF08452 DNAP_B_exo_N: DNA polymerase family B exonuclease domain, N-terminal; InterPro: IPR013660 This domain is found in viral DNA polymerases to the N terminus of DNA polymerase family B exonuclease domains (IPR006133 from INTERPRO). ; GO: 0003887 DNA-directed DNA polymerase activity
Probab=20.50 E-value=48 Score=17.36 Aligned_cols=17 Identities=24% Similarity=1.011 Sum_probs=13.1
Q ss_pred hhhHhhccCCCCceEEE
Q 022321 93 DCLKWLDKRDANSVVYV 109 (299)
Q Consensus 93 ~~~~wl~~~~~~~vVyv 109 (299)
.|..|.+..+++..+|.
T Consensus 4 kCiNWFE~~ge~r~lyL 20 (22)
T PF08452_consen 4 KCINWFESRGEERFLYL 20 (22)
T ss_pred EEeehhhhCCceeEEEE
Confidence 47889998887777774
No 253
>PRK08266 hypothetical protein; Provisional
Probab=20.48 E-value=6.9e+02 Score=24.43 Aligned_cols=58 Identities=10% Similarity=0.222 Sum_probs=32.5
Q ss_pred EeeccCcchhhh--hHhcCCcEEeccCcCCHHHHHHHHHHHhCc-eEEecCCCCHHHHHHHHHHHhc
Q 022321 184 FLTHCGWNSTME--SICGGVPVICWPFFAEQQTNCRYACTTWGI-GMEVNHDVKRGDIEALVKEMME 247 (299)
Q Consensus 184 fItHgG~~s~~E--al~~GvP~i~~P~~~DQ~~na~~v~~~~g~-G~~l~~~~~~~~l~~av~~ll~ 247 (299)
++..+|++.+.. -..++-......+ ..++.++.+ +.+|+ +..+. +.+++..++++.++
T Consensus 453 v~NN~~y~~~~~~~~~~~~~~~~~~~~--~~~d~~~la-~a~G~~~~~v~---~~~el~~al~~a~~ 513 (542)
T PRK08266 453 VFNNNAYGNVRRDQKRRFGGRVVASDL--VNPDFVKLA-ESFGVAAFRVD---SPEELRAALEAALA 513 (542)
T ss_pred EEeCCcchHHHHHHHHhcCCCcccCCC--CCCCHHHHH-HHcCCeEEEeC---CHHHHHHHHHHHHh
Confidence 678888876532 1223222222221 124455555 77776 44443 68888888888765
No 254
>PRK01185 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=20.44 E-value=2e+02 Score=25.75 Aligned_cols=54 Identities=15% Similarity=0.393 Sum_probs=38.2
Q ss_pred CCCcceEeeccCcchhhhhHh-cCCcEEeccCcCCHHHHHHHHHHHhCceEEecCCCCHHHHHHHHHHHhcCC
Q 022321 178 HPSVGAFLTHCGWNSTMESIC-GGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVKRGDIEALVKEMMEGD 249 (299)
Q Consensus 178 ~~~v~~fItHgG~~s~~Eal~-~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~l~~av~~ll~~~ 249 (299)
.+++ +|+=||-||++.+.. ...|++++-.. .+|..- +++.+++.+++.++++++
T Consensus 52 ~~D~--vi~lGGDGT~L~a~~~~~~PilGIN~G--------------~lGFL~--~~~~~~~~~~l~~i~~g~ 106 (271)
T PRK01185 52 NADV--IITIGGDGTILRTLQRAKGPILGINMG--------------GLGFLT--EIEIDEVGSAIKKLIRGE 106 (271)
T ss_pred CCCE--EEEEcCcHHHHHHHHHcCCCEEEEECC--------------CCccCc--ccCHHHHHHHHHHHHcCC
Confidence 4555 999999999999887 35677666441 122211 567888999999998864
No 255
>COG0855 Ppk Polyphosphate kinase [Inorganic ion transport and metabolism]
Probab=20.29 E-value=4.1e+02 Score=26.97 Aligned_cols=100 Identities=11% Similarity=0.171 Sum_probs=63.2
Q ss_pred HHHHHHHHHhhccCccEEEEcCcccccHHHHHHHHhcC--CCEEEeCcccCCcccccccccccCCCCCcccchhhhHhhc
Q 022321 22 MFDFMGSEAQNCFRSSAIIFNTFDEFEHAALEVIASKF--PNIYTVGPLPLLCKQVDETKFRSFGSSLWKEDTDCLKWLD 99 (299)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~l~ns~~~LE~~~~~~~r~~~--p~v~~VGpl~~~~~~~~~~~~~~l~~~~~~~~~~~~~wl~ 99 (299)
+.+...+.|..+++.|.++.--++.+++ .+++++..- |+|..|---.-+... ..+-+.+-++
T Consensus 329 ~~e~~~~~F~aIre~DiLlhHPYeSF~~-Vv~fl~qAA~DP~VLAIKqTLYRt~~---------------dSpIV~ALi~ 392 (696)
T COG0855 329 FREKGGNIFDAIREGDILLHHPYESFEP-VVEFLRQAAADPDVLAIKQTLYRTSK---------------DSPIVRALID 392 (696)
T ss_pred hhhccchHHHHHhhcCeEEECchhhhHH-HHHHHHHhhcCCCeEEEEEEEEecCC---------------CCHHHHHHHH
Confidence 4455556789999999999999999997 889998754 788887653322221 1112233344
Q ss_pred cCCC--CceEEEeecCCcccCHHHHHHHHHHHHcCCCCEEEE
Q 022321 100 KRDA--NSVVYVNYGSVTVMSEQHLTEFAWGLANSKRPFLWI 139 (299)
Q Consensus 100 ~~~~--~~vVyvsfGS~~~~~~~~~~~l~~al~~~~~~~iw~ 139 (299)
...+ .-+|+|=+ .+..+.+.-..-++.|++.|+.|+.-
T Consensus 393 AA~nGKqVtvlVEL--kARFDEE~NI~WAk~LE~AGvhVvyG 432 (696)
T COG0855 393 AAENGKQVTVLVEL--KARFDEEANIHWAKRLERAGVHVVYG 432 (696)
T ss_pred HHHcCCeEEEEEEE--hhhcChhhhhHHHHHHHhCCcEEEec
Confidence 3322 22344432 23456665566788899899888753
No 256
>COG3340 PepE Peptidase E [Amino acid transport and metabolism]
Probab=20.11 E-value=5.8e+02 Score=22.13 Aligned_cols=45 Identities=11% Similarity=0.132 Sum_probs=33.9
Q ss_pred hhHhhccCCCCceEEEeecCCcccCHHHHHHHHHHHHcCCCCEEEE
Q 022321 94 CLKWLDKRDANSVVYVNYGSVTVMSEQHLTEFAWGLANSKRPFLWI 139 (299)
Q Consensus 94 ~~~wl~~~~~~~vVyvsfGS~~~~~~~~~~~l~~al~~~~~~~iw~ 139 (299)
+..++... .++|.||-+-|...-....+++..++|++.|+.+.-.
T Consensus 24 i~n~l~g~-~~~i~FIPtAs~~~~~~~Yv~k~~~~l~~lg~~v~~L 68 (224)
T COG3340 24 IANFLQGK-RKTIAFIPTASVDSEDDFYVEKVRNALAKLGLEVSEL 68 (224)
T ss_pred HHHHhcCC-CceEEEEecCccccchHHHHHHHHHHHHHcCCeeeee
Confidence 34455443 4589999999987766778889999999999876543
No 257
>PRK14071 6-phosphofructokinase; Provisional
Probab=20.04 E-value=1e+02 Score=28.78 Aligned_cols=38 Identities=16% Similarity=0.094 Sum_probs=29.9
Q ss_pred hhhcCCCcceEeeccCcchhhhhHh----cCCcEEeccCcCC
Q 022321 174 QVLLHPSVGAFLTHCGWNSTMESIC----GGVPVICWPFFAE 211 (299)
Q Consensus 174 ~iL~~~~v~~fItHgG~~s~~Eal~----~GvP~i~~P~~~D 211 (299)
..|..-.+..+|.=||.+|..-+.. .|+|+|++|-.-|
T Consensus 101 ~~l~~~~Id~Li~IGGdgS~~~a~~L~~~~~i~vIgiPkTID 142 (360)
T PRK14071 101 DGYHSLGLDALIGIGGDGSLAILRRLAQQGGINLVGIPKTID 142 (360)
T ss_pred HHHHHcCCCEEEEECChhHHHHHHHHHHhcCCcEEEeccccc
Confidence 3567778889999999998755532 4999999998554
Done!