BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022323
(299 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|B2G6W4|DNAJ_LACRJ Chaperone protein DnaJ OS=Lactobacillus reuteri (strain JCM 1112)
GN=dnaJ PE=3 SV=1
Length = 383
Score = 35.0 bits (79), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 45/130 (34%), Gaps = 34/130 (26%)
Query: 165 FGGLIAPTLELKLGLGGTSYEDFI-----RNMHLPMQLSQVDPIVASFSGGAVGVISALM 219
FGG G GG + D R++ M L +D +
Sbjct: 93 FGGGFDDIFSQFFGGGGRTRRDPTAPRQGRDLQYAMTLDFMDAVFG-------------- 138
Query: 220 LIEANNVEQQEKKRCKYCHGSGY------LACARCSSSGVCLSVDPISTSNASNGPLRVP 273
+ ++ CK CHG+G + C RC +GV SV N ++
Sbjct: 139 --KTTTIKYDRDAECKTCHGTGAKPGKSPITCPRCHGAGVITSVRQTPLGN-----MQTQ 191
Query: 274 TTQRCPNCSG 283
TT CP C+G
Sbjct: 192 TT--CPECNG 199
>sp|A5VJE8|DNAJ_LACRD Chaperone protein DnaJ OS=Lactobacillus reuteri (strain DSM 20016)
GN=dnaJ PE=3 SV=1
Length = 383
Score = 35.0 bits (79), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 45/130 (34%), Gaps = 34/130 (26%)
Query: 165 FGGLIAPTLELKLGLGGTSYEDFI-----RNMHLPMQLSQVDPIVASFSGGAVGVISALM 219
FGG G GG + D R++ M L +D +
Sbjct: 93 FGGGFDDIFSQFFGGGGRTRRDPTAPRQGRDLQYAMTLDFMDAVFG-------------- 138
Query: 220 LIEANNVEQQEKKRCKYCHGSGY------LACARCSSSGVCLSVDPISTSNASNGPLRVP 273
+ ++ CK CHG+G + C RC +GV SV N ++
Sbjct: 139 --KTTTIKYDRDAECKTCHGTGAKPGKSPITCPRCHGAGVITSVRQTPLGN-----MQTQ 191
Query: 274 TTQRCPNCSG 283
TT CP C+G
Sbjct: 192 TT--CPECNG 199
>sp|Q6YPM2|DNAJ_ONYPE Chaperone protein DnaJ OS=Onion yellows phytoplasma (strain OY-M)
GN=dnaJ PE=3 SV=1
Length = 257
Score = 33.5 bits (75), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 13/61 (21%)
Query: 234 CKYCHGSGYLA------CARCSSSGVCLSVDPISTSNASNGPLRVPTTQRCPNCSGDVPE 287
C+ CHG G ++ C RC +G ++ N + + Q CPNCSG E
Sbjct: 141 CRVCHGKGAVSNQDVITCKRCGGNGQIITEQRTFLGN-------IRSRQVCPNCSGKGQE 193
Query: 288 L 288
+
Sbjct: 194 I 194
>sp|B3WEQ6|DNAJ_LACCB Chaperone protein DnaJ OS=Lactobacillus casei (strain BL23) GN=dnaJ
PE=3 SV=1
Length = 387
Score = 33.5 bits (75), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/61 (26%), Positives = 26/61 (42%), Gaps = 4/61 (6%)
Query: 234 CKYCHGSGYLACARCSSSGVCLSVDPISTSNASNGPLRVPTTQRCPNCSGDVPELPLHRN 293
C CHGSGY+ R ++ G ++ + ++ ++CP C G E H
Sbjct: 173 CHKCHGSGYIQVQRNTAFGAMMTRQVCDVCGGTGKEIK----EKCPTCHGTGHEQERHTI 228
Query: 294 D 294
D
Sbjct: 229 D 229
>sp|Q038N5|DNAJ_LACC3 Chaperone protein DnaJ OS=Lactobacillus casei (strain ATCC 334)
GN=dnaJ PE=3 SV=1
Length = 387
Score = 33.5 bits (75), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/61 (26%), Positives = 26/61 (42%), Gaps = 4/61 (6%)
Query: 234 CKYCHGSGYLACARCSSSGVCLSVDPISTSNASNGPLRVPTTQRCPNCSGDVPELPLHRN 293
C CHGSGY+ R ++ G ++ + ++ ++CP C G E H
Sbjct: 173 CHKCHGSGYIQVQRNTAFGAMMTRQVCDVCGGTGKEIK----EKCPTCHGTGHEQERHTI 228
Query: 294 D 294
D
Sbjct: 229 D 229
>sp|Q8WGF6|CYB_LEPCU Cytochrome b OS=Leptonycteris curasoae GN=MT-CYB PE=3 SV=1
Length = 379
Score = 32.7 bits (73), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 116 LKVIDESGEEEASEMPEIPSSIPFLPYVTPKTLKQLYLTSLSFISGIILF 165
L + E+G + +P P IPF PY T K + +LT L+ +S ++LF
Sbjct: 197 LLFLHETGSNNPTGIPSDPDMIPFHPYYTIKDILG-FLTMLTALSALVLF 245
>sp|Q7YD12|CYB_PLAGE Cytochrome b OS=Platalina genovensium GN=MT-CYB PE=3 SV=1
Length = 379
Score = 32.3 bits (72), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Query: 91 KHRRNRIFFLMEELRRLRVQQRIKGLKVIDESGEEEASEMPEIPSSIPFLPYVTPKTLKQ 150
K R F L + V + L + E+G + +P P IPF PY T K +
Sbjct: 172 KATLTRFFAFHFMLPFIVVALVMIHLLFLHETGSNNPTGIPSDPDLIPFHPYYTIKDILG 231
Query: 151 LYLTSLSFISGIILF 165
+L L+ +S ++LF
Sbjct: 232 -FLVMLTILSTLVLF 245
>sp|P66148|RL28B_MYCTU 50S ribosomal protein L28-2 OS=Mycobacterium tuberculosis GN=rpmB2
PE=3 SV=1
Length = 78
Score = 32.3 bits (72), Expect = 4.5, Method: Composition-based stats.
Identities = 14/32 (43%), Positives = 21/32 (65%)
Query: 94 RNRIFFLMEELRRLRVQQRIKGLKVIDESGEE 125
+ R ++L E RR+R++ KG+KVID G E
Sbjct: 34 QQRTYYLPSEGRRIRLRVSTKGIKVIDRDGIE 65
>sp|P66149|RL28B_MYCBO 50S ribosomal protein L28-2 OS=Mycobacterium bovis (strain ATCC
BAA-935 / AF2122/97) GN=rpmB2 PE=3 SV=1
Length = 78
Score = 32.3 bits (72), Expect = 4.5, Method: Composition-based stats.
Identities = 14/32 (43%), Positives = 21/32 (65%)
Query: 94 RNRIFFLMEELRRLRVQQRIKGLKVIDESGEE 125
+ R ++L E RR+R++ KG+KVID G E
Sbjct: 34 QQRTYYLPSEGRRIRLRVSTKGIKVIDRDGIE 65
>sp|Q8R890|XERCL_THETN Tyrosine recombinase XerC-like OS=Thermoanaerobacter tengcongensis
(strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4)
GN=TTE2127 PE=3 SV=1
Length = 391
Score = 32.3 bits (72), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 36/79 (45%), Gaps = 20/79 (25%)
Query: 78 FVQMQLKEIEDNIKHRRNRIFFLME--------------------ELRRLRVQQRIKGLK 117
F ++K+I++ +K R + FL+ E + LRVQ+ IK +
Sbjct: 180 FSDEEIKKIKEALKGHRLKALFLLAFGTGLRQGELLGLKWTDIDFEKKELRVQRMIKQVT 239
Query: 118 VIDESGEEEASEMPEIPSS 136
+IDE G + + +IP +
Sbjct: 240 IIDEKGNRKYKTIEQIPKT 258
>sp|Q8C3L1|SSUH2_MOUSE Protein SSUH2 homolog OS=Mus musculus GN=Ssuh2 PE=2 SV=1
Length = 340
Score = 32.0 bits (71), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 23/52 (44%), Gaps = 6/52 (11%)
Query: 232 KRCKYCHGSGYLACARCSSSGVCLSVDPISTSNASNGPLRVPTTQRCPNCSG 283
K C CHG G C+ C +G+ + S+ S + +RC CSG
Sbjct: 176 KECHKCHGRGRYKCSGCHGAGM------VRCSSCSGTKRKAKQPRRCHLCSG 221
>sp|P45555|DNAJ_STAAU Chaperone protein DnaJ OS=Staphylococcus aureus GN=dnaJ PE=3 SV=1
Length = 379
Score = 31.6 bits (70), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 18/58 (31%)
Query: 231 KKRCKYCHGSGYLACARCSSSGVCLSVDPISTSNASNGPLRVPTTQRCPNCSGDVPEL 288
KK C YC+G+G++A + + G RV T Q CP C+G E
Sbjct: 163 KKTCSYCNGAGHVAVEQNTILG------------------RVRTEQVCPKCNGSGQEF 202
>sp|A4XLW0|DEOC_CALS8 Deoxyribose-phosphate aldolase OS=Caldicellulosiruptor
saccharolyticus (strain ATCC 43494 / DSM 8903) GN=deoC
PE=3 SV=1
Length = 220
Score = 31.6 bits (70), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 60 DNIPNNFSIIEGPETLQDFVQMQLKEIEDNIKHRRNRIFFLMEELRRLRVQQRIKGLKVI 119
D + N +++EG D+V ++K I D + +N+I ++ E L QQ+I+ K++
Sbjct: 92 DMVINIGALLEGN---VDYVYEEIKNIVDIARGYKNKIVKVIIETSELSDQQKIEACKIV 148
Query: 120 DESGEE 125
++G +
Sbjct: 149 MDAGAD 154
>sp|Q7Y5X9|CYB_LIOSP Cytochrome b OS=Lionycteris spurrelli GN=MT-CYB PE=3 SV=1
Length = 379
Score = 31.6 bits (70), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 116 LKVIDESGEEEASEMPEIPSSIPFLPYVTPKTLKQLYLTSLSFISGIILF 165
L + E+G + +P P IPF PY T K + +L L+ +S ++LF
Sbjct: 197 LLFLHETGSNNPTGIPSDPDMIPFHPYYTIKDILG-FLMMLTVLSALVLF 245
>sp|Q2YT48|DNAJ_STAAB Chaperone protein DnaJ OS=Staphylococcus aureus (strain bovine
RF122 / ET3-1) GN=dnaJ PE=3 SV=1
Length = 379
Score = 31.6 bits (70), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 18/58 (31%)
Query: 231 KKRCKYCHGSGYLACARCSSSGVCLSVDPISTSNASNGPLRVPTTQRCPNCSGDVPEL 288
KK C YC+G+G++A + + G RV T Q CP C+G E
Sbjct: 163 KKTCSYCNGAGHVAVEQNTILG------------------RVRTEQVCPKCNGSGQEF 202
>sp|Q8U1I5|Y1222_PYRFU Putative antitoxin PF1222 OS=Pyrococcus furiosus (strain ATCC 43587
/ DSM 3638 / JCM 8422 / Vc1) GN=PF1222 PE=3 SV=2
Length = 78
Score = 31.6 bits (70), Expect = 7.4, Method: Composition-based stats.
Identities = 21/72 (29%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 59 SDNIPNNFSIIEGPETLQDFVQMQLKEIEDNIKHRRNRIFFLMEELRRLRVQQRIKGLKV 118
SD++ N I+G ++ + ++ LKE + N K RIF ++ E V++R+K L+
Sbjct: 8 SDDVYNELLRIKGNKSFSEVLRELLKERKGN-KEVLKRIFGILSEEEYQEVKKRLKELEG 66
Query: 119 IDESGEEEASEM 130
E E+ ++M
Sbjct: 67 EFEKWEQSLTQM 78
>sp|P63972|DNAJ_STAAW Chaperone protein DnaJ OS=Staphylococcus aureus (strain MW2)
GN=dnaJ PE=3 SV=1
Length = 379
Score = 31.6 bits (70), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 18/58 (31%)
Query: 231 KKRCKYCHGSGYLACARCSSSGVCLSVDPISTSNASNGPLRVPTTQRCPNCSGDVPEL 288
KK C YC+G+G++A + + G RV T Q CP C+G E
Sbjct: 163 KKTCSYCNGAGHVAVEQNTILG------------------RVRTEQVCPKCNGSGQEF 202
>sp|A8Z4B8|DNAJ_STAAT Chaperone protein DnaJ OS=Staphylococcus aureus (strain USA300 /
TCH1516) GN=dnaJ PE=3 SV=1
Length = 379
Score = 31.6 bits (70), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 18/58 (31%)
Query: 231 KKRCKYCHGSGYLACARCSSSGVCLSVDPISTSNASNGPLRVPTTQRCPNCSGDVPEL 288
KK C YC+G+G++A + + G RV T Q CP C+G E
Sbjct: 163 KKTCSYCNGAGHVAVEQNTILG------------------RVRTEQVCPKCNGSGQEF 202
>sp|Q6G8Y8|DNAJ_STAAS Chaperone protein DnaJ OS=Staphylococcus aureus (strain MSSA476)
GN=dnaJ PE=3 SV=1
Length = 379
Score = 31.6 bits (70), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 18/58 (31%)
Query: 231 KKRCKYCHGSGYLACARCSSSGVCLSVDPISTSNASNGPLRVPTTQRCPNCSGDVPEL 288
KK C YC+G+G++A + + G RV T Q CP C+G E
Sbjct: 163 KKTCSYCNGAGHVAVEQNTILG------------------RVRTEQVCPKCNGSGQEF 202
>sp|P63971|DNAJ_STAAN Chaperone protein DnaJ OS=Staphylococcus aureus (strain N315)
GN=dnaJ PE=1 SV=1
Length = 379
Score = 31.6 bits (70), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 18/58 (31%)
Query: 231 KKRCKYCHGSGYLACARCSSSGVCLSVDPISTSNASNGPLRVPTTQRCPNCSGDVPEL 288
KK C YC+G+G++A + + G RV T Q CP C+G E
Sbjct: 163 KKTCSYCNGAGHVAVEQNTILG------------------RVRTEQVCPKCNGSGQEF 202
>sp|P63970|DNAJ_STAAM Chaperone protein DnaJ OS=Staphylococcus aureus (strain Mu50 / ATCC
700699) GN=dnaJ PE=1 SV=1
Length = 379
Score = 31.6 bits (70), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 18/58 (31%)
Query: 231 KKRCKYCHGSGYLACARCSSSGVCLSVDPISTSNASNGPLRVPTTQRCPNCSGDVPEL 288
KK C YC+G+G++A + + G RV T Q CP C+G E
Sbjct: 163 KKTCSYCNGAGHVAVEQNTILG------------------RVRTEQVCPKCNGSGQEF 202
>sp|A6QHC2|DNAJ_STAAE Chaperone protein DnaJ OS=Staphylococcus aureus (strain Newman)
GN=dnaJ PE=3 SV=1
Length = 379
Score = 31.6 bits (70), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 18/58 (31%)
Query: 231 KKRCKYCHGSGYLACARCSSSGVCLSVDPISTSNASNGPLRVPTTQRCPNCSGDVPEL 288
KK C YC+G+G++A + + G RV T Q CP C+G E
Sbjct: 163 KKTCSYCNGAGHVAVEQNTILG------------------RVRTEQVCPKCNGSGQEF 202
>sp|Q5HFI1|DNAJ_STAAC Chaperone protein DnaJ OS=Staphylococcus aureus (strain COL)
GN=dnaJ PE=3 SV=1
Length = 379
Score = 31.6 bits (70), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 18/58 (31%)
Query: 231 KKRCKYCHGSGYLACARCSSSGVCLSVDPISTSNASNGPLRVPTTQRCPNCSGDVPEL 288
KK C YC+G+G++A + + G RV T Q CP C+G E
Sbjct: 163 KKTCSYCNGAGHVAVEQNTILG------------------RVRTEQVCPKCNGSGQEF 202
>sp|A5ITA7|DNAJ_STAA9 Chaperone protein DnaJ OS=Staphylococcus aureus (strain JH9)
GN=dnaJ PE=3 SV=1
Length = 379
Score = 31.6 bits (70), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 18/58 (31%)
Query: 231 KKRCKYCHGSGYLACARCSSSGVCLSVDPISTSNASNGPLRVPTTQRCPNCSGDVPEL 288
KK C YC+G+G++A + + G RV T Q CP C+G E
Sbjct: 163 KKTCSYCNGAGHVAVEQNTILG------------------RVRTEQVCPKCNGSGQEF 202
>sp|Q2FXZ3|DNAJ_STAA8 Chaperone protein DnaJ OS=Staphylococcus aureus (strain NCTC 8325)
GN=dnaJ PE=3 SV=1
Length = 379
Score = 31.6 bits (70), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 18/58 (31%)
Query: 231 KKRCKYCHGSGYLACARCSSSGVCLSVDPISTSNASNGPLRVPTTQRCPNCSGDVPEL 288
KK C YC+G+G++A + + G RV T Q CP C+G E
Sbjct: 163 KKTCSYCNGAGHVAVEQNTILG------------------RVRTEQVCPKCNGSGQEF 202
>sp|Q2FGE4|DNAJ_STAA3 Chaperone protein DnaJ OS=Staphylococcus aureus (strain USA300)
GN=dnaJ PE=3 SV=1
Length = 379
Score = 31.6 bits (70), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 18/58 (31%)
Query: 231 KKRCKYCHGSGYLACARCSSSGVCLSVDPISTSNASNGPLRVPTTQRCPNCSGDVPEL 288
KK C YC+G+G++A + + G RV T Q CP C+G E
Sbjct: 163 KKTCSYCNGAGHVAVEQNTILG------------------RVRTEQVCPKCNGSGQEF 202
>sp|A6U251|DNAJ_STAA2 Chaperone protein DnaJ OS=Staphylococcus aureus (strain JH1)
GN=dnaJ PE=3 SV=1
Length = 379
Score = 31.6 bits (70), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 18/58 (31%)
Query: 231 KKRCKYCHGSGYLACARCSSSGVCLSVDPISTSNASNGPLRVPTTQRCPNCSGDVPEL 288
KK C YC+G+G++A + + G RV T Q CP C+G E
Sbjct: 163 KKTCSYCNGAGHVAVEQNTILG------------------RVRTEQVCPKCNGSGQEF 202
>sp|A7X2Y0|DNAJ_STAA1 Chaperone protein DnaJ OS=Staphylococcus aureus (strain Mu3 / ATCC
700698) GN=dnaJ PE=3 SV=1
Length = 379
Score = 31.6 bits (70), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 18/58 (31%)
Query: 231 KKRCKYCHGSGYLACARCSSSGVCLSVDPISTSNASNGPLRVPTTQRCPNCSGDVPEL 288
KK C YC+G+G++A + + G RV T Q CP C+G E
Sbjct: 163 KKTCSYCNGAGHVAVEQNTILG------------------RVRTEQVCPKCNGSGQEF 202
>sp|Q6GGC1|DNAJ_STAAR Chaperone protein DnaJ OS=Staphylococcus aureus (strain MRSA252)
GN=dnaJ PE=3 SV=1
Length = 379
Score = 31.6 bits (70), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 18/58 (31%)
Query: 231 KKRCKYCHGSGYLACARCSSSGVCLSVDPISTSNASNGPLRVPTTQRCPNCSGDVPEL 288
KK C YC+G+G++A + + G RV T Q CP C+G E
Sbjct: 163 KKTCSYCNGAGHVAVEQNTILG------------------RVRTEQVCPKCNGSGQEF 202
>sp|Q597E7|CYB_TRINC Cytochrome b OS=Trinycteris nicefori GN=MT-CYB PE=3 SV=1
Length = 379
Score = 31.2 bits (69), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 116 LKVIDESGEEEASEMPEIPSSIPFLPYVTPKTLKQLYLTSLSFISGIILF 165
L + E+G + +P P IPF PY T K + +L L+ +S ++LF
Sbjct: 197 LLFLHETGSNNPTGIPSDPDMIPFHPYYTIKDILG-FLIMLTVLSALVLF 245
>sp|Q6YDL6|CYB_VAMCA Cytochrome b OS=Vampyrodes caraccioli GN=MT-CYB PE=3 SV=1
Length = 379
Score = 31.2 bits (69), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 38/94 (40%), Gaps = 2/94 (2%)
Query: 72 PETLQDFVQMQLKEIEDNIKHRRNRIFFLMEELRRLRVQQRIKGLKVIDESGEEEASEMP 131
P D VQ + K R F L + + L + E+G + +P
Sbjct: 154 PYIGTDLVQWIWGGFSVD-KATLTRFFAFHFLLPFIVAALVMVHLLFLHETGSNNPTGIP 212
Query: 132 EIPSSIPFLPYVTPKTLKQLYLTSLSFISGIILF 165
P IPF PY T K + +L L+ +S ++LF
Sbjct: 213 SDPDMIPFHPYYTIKDILG-FLVMLTALSALVLF 245
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.135 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 113,086,659
Number of Sequences: 539616
Number of extensions: 4684546
Number of successful extensions: 16997
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 67
Number of HSP's that attempted gapping in prelim test: 16940
Number of HSP's gapped (non-prelim): 103
length of query: 299
length of database: 191,569,459
effective HSP length: 117
effective length of query: 182
effective length of database: 128,434,387
effective search space: 23375058434
effective search space used: 23375058434
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)