Query 022324
Match_columns 299
No_of_seqs 438 out of 2705
Neff 11.1
Searched_HMMs 29240
Date Mon Mar 25 03:38:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022324.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022324hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1vyh_C Platelet-activating fac 100.0 3.7E-37 1.3E-41 263.4 16.2 247 20-297 128-401 (410)
2 2ynn_A Coatomer subunit beta'; 100.0 2E-36 6.8E-41 248.8 18.0 256 11-296 24-292 (304)
3 1got_B GT-beta; complex (GTP-b 100.0 8.2E-36 2.8E-40 249.0 18.5 259 13-298 68-334 (340)
4 3ow8_A WD repeat-containing pr 100.0 5.2E-36 1.8E-40 248.2 15.6 255 12-297 48-311 (321)
5 2pbi_B Guanine nucleotide-bind 100.0 1.8E-34 6.1E-39 242.2 21.5 256 36-298 58-348 (354)
6 1vyh_C Platelet-activating fac 100.0 1.2E-34 4.3E-39 247.8 20.3 231 36-297 102-359 (410)
7 3ow8_A WD repeat-containing pr 100.0 3.7E-34 1.3E-38 237.0 22.4 231 37-297 27-269 (321)
8 2ynn_A Coatomer subunit beta'; 100.0 1.6E-34 5.5E-39 237.5 19.6 231 37-298 8-250 (304)
9 4gqb_B Methylosome protein 50; 100.0 5.2E-34 1.8E-38 238.1 21.6 230 40-297 80-321 (344)
10 3frx_A Guanine nucleotide-bind 100.0 1.3E-33 4.5E-38 233.6 23.3 233 37-296 12-257 (319)
11 3iz6_a 40S ribosomal protein R 100.0 1.2E-34 4.1E-39 245.5 13.4 264 11-298 77-366 (380)
12 3v7d_B Cell division control p 100.0 5.3E-32 1.8E-36 235.0 30.3 274 20-297 11-371 (464)
13 4g56_B MGC81050 protein; prote 100.0 9.1E-34 3.1E-38 238.1 17.5 247 22-297 70-333 (357)
14 1got_B GT-beta; complex (GTP-b 100.0 1.5E-32 5.2E-37 229.2 22.8 233 36-297 49-291 (340)
15 2pm7_B Protein transport prote 100.0 9.6E-33 3.3E-37 226.1 19.6 232 37-297 4-275 (297)
16 4ery_A WD repeat-containing pr 100.0 2E-33 6.8E-38 231.6 14.7 254 13-296 36-299 (312)
17 4gqb_B Methylosome protein 50; 100.0 1.2E-32 4E-37 230.0 19.0 238 39-297 27-279 (344)
18 1erj_A Transcriptional repress 100.0 3.2E-32 1.1E-36 231.6 18.0 223 44-297 125-379 (393)
19 2xzm_R RACK1; ribosome, transl 100.0 1.5E-31 5.1E-36 223.5 21.7 235 36-296 15-275 (343)
20 3bg1_A Protein SEC13 homolog; 100.0 3E-32 1E-36 225.1 16.9 229 39-297 10-283 (316)
21 1nr0_A Actin interacting prote 100.0 2.6E-32 9E-37 244.8 16.8 270 21-296 38-386 (611)
22 1erj_A Transcriptional repress 100.0 1.8E-31 6E-36 227.1 20.8 240 37-297 59-331 (393)
23 3fm0_A Protein CIAO1; WDR39,SG 100.0 3.6E-32 1.2E-36 227.3 15.7 258 10-297 26-325 (345)
24 3fm0_A Protein CIAO1; WDR39,SG 100.0 3.5E-31 1.2E-35 221.4 20.5 233 36-296 9-272 (345)
25 2ymu_A WD-40 repeat protein; u 100.0 9.3E-32 3.2E-36 239.5 18.0 246 16-297 319-570 (577)
26 2hes_X YDR267CP; beta-propelle 100.0 9E-32 3.1E-36 223.6 14.9 261 14-297 26-318 (330)
27 1p22_A F-BOX/WD-repeat protein 100.0 3.5E-29 1.2E-33 215.6 31.5 271 21-298 8-356 (435)
28 4g56_B MGC81050 protein; prote 100.0 1E-31 3.6E-36 225.5 15.2 248 21-297 25-291 (357)
29 4ery_A WD repeat-containing pr 100.0 4.6E-29 1.6E-33 205.5 29.3 192 104-297 15-213 (312)
30 2ovr_B FBW7, F-BOX/WD repeat p 100.0 6.4E-29 2.2E-33 214.6 31.0 266 20-297 15-298 (445)
31 3dwl_C Actin-related protein 2 100.0 8.1E-32 2.8E-36 227.6 12.5 226 40-296 9-271 (377)
32 2pbi_B Guanine nucleotide-bind 100.0 3.6E-29 1.2E-33 209.9 28.0 191 104-297 56-261 (354)
33 3mmy_A MRNA export factor; mRN 100.0 8.5E-31 2.9E-35 219.9 18.0 244 26-297 23-336 (368)
34 3frx_A Guanine nucleotide-bind 100.0 7.3E-29 2.5E-33 205.1 28.0 189 105-297 10-217 (319)
35 2xzm_R RACK1; ribosome, transl 100.0 3.4E-31 1.2E-35 221.3 13.8 253 11-297 38-330 (343)
36 3dm0_A Maltose-binding peripla 100.0 6.8E-30 2.3E-34 232.4 21.9 233 38-296 378-622 (694)
37 1gxr_A ESG1, transducin-like e 100.0 1.7E-30 5.9E-35 215.5 15.6 271 23-297 32-327 (337)
38 3iz6_a 40S ribosomal protein R 100.0 4E-29 1.4E-33 211.6 22.7 191 104-297 58-270 (380)
39 2ymu_A WD-40 repeat protein; u 100.0 6.2E-30 2.1E-34 227.7 18.5 245 17-297 279-529 (577)
40 1nr0_A Actin interacting prote 100.0 9.4E-29 3.2E-33 221.7 26.2 207 88-297 23-260 (611)
41 4aow_A Guanine nucleotide-bind 100.0 6.9E-29 2.4E-33 206.3 23.3 232 37-295 33-275 (340)
42 2hes_X YDR267CP; beta-propelle 100.0 4.1E-28 1.4E-32 201.5 27.8 191 104-297 6-220 (330)
43 3odt_A Protein DOA1; ubiquitin 100.0 2E-30 6.7E-35 213.1 13.7 251 14-296 31-285 (313)
44 3zwl_B Eukaryotic translation 100.0 1.9E-29 6.5E-34 211.7 18.9 231 35-296 25-279 (369)
45 3jrp_A Fusion protein of prote 100.0 2.6E-29 8.7E-34 211.8 19.6 235 34-297 3-277 (379)
46 1k8k_C P40, ARP2/3 complex 41 100.0 5.4E-29 1.8E-33 209.5 21.4 227 40-295 6-263 (372)
47 4gga_A P55CDC, cell division c 100.0 1.3E-29 4.6E-34 217.3 17.9 246 20-297 123-385 (420)
48 3f3f_A Nucleoporin SEH1; struc 100.0 4.7E-29 1.6E-33 207.4 19.8 233 39-298 8-328 (351)
49 2pm7_B Protein transport prote 100.0 7.5E-28 2.6E-32 197.0 26.0 189 106-297 3-228 (297)
50 1r5m_A SIR4-interacting protei 100.0 1.5E-29 5E-34 216.4 16.5 252 14-297 60-351 (425)
51 4h5i_A Guanine nucleotide-exch 100.0 2.7E-28 9.1E-33 205.4 23.6 186 109-297 130-333 (365)
52 2j04_B YDR362CP, TAU91; beta p 100.0 1.3E-30 4.4E-35 228.3 9.0 231 14-262 175-427 (524)
53 1sq9_A Antiviral protein SKI8; 100.0 4.2E-30 1.4E-34 218.4 11.6 258 13-297 27-385 (397)
54 2pm9_A Protein WEB1, protein t 100.0 4.1E-30 1.4E-34 219.6 11.5 253 19-297 42-327 (416)
55 3vl1_A 26S proteasome regulato 100.0 4.9E-30 1.7E-34 219.6 11.0 251 16-297 72-355 (420)
56 3i2n_A WD repeat-containing pr 100.0 6E-30 2.1E-34 214.1 11.1 246 21-296 43-342 (357)
57 3mkq_A Coatomer beta'-subunit; 100.0 4.5E-29 1.6E-33 230.6 16.8 253 13-295 26-291 (814)
58 3vl1_A 26S proteasome regulato 100.0 4.9E-30 1.7E-34 219.6 9.5 252 13-295 110-407 (420)
59 4a11_B DNA excision repair pro 100.0 9.2E-29 3.2E-33 210.4 17.3 257 21-298 22-356 (408)
60 4aez_A CDC20, WD repeat-contai 100.0 5.3E-29 1.8E-33 212.3 15.7 245 21-297 112-370 (401)
61 2aq5_A Coronin-1A; WD40 repeat 100.0 2.8E-29 9.4E-34 214.1 13.1 257 18-295 53-332 (402)
62 1sq9_A Antiviral protein SKI8; 100.0 1.5E-28 5.1E-33 208.8 16.6 233 37-297 11-312 (397)
63 3k26_A Polycomb protein EED; W 100.0 1.9E-29 6.5E-34 211.6 10.6 246 21-297 43-356 (366)
64 4gq1_A NUP37; propeller, trans 100.0 1.1E-28 3.7E-33 209.8 15.1 212 78-298 109-381 (393)
65 2j04_B YDR362CP, TAU91; beta p 100.0 7.3E-28 2.5E-32 210.9 20.6 247 40-297 131-418 (524)
66 3ei3_B DNA damage-binding prot 100.0 7E-29 2.4E-33 210.1 13.6 250 13-295 87-371 (383)
67 1r5m_A SIR4-interacting protei 100.0 3.6E-29 1.2E-33 214.0 11.5 253 15-298 123-416 (425)
68 2pm9_A Protein WEB1, protein t 100.0 1E-29 3.5E-34 217.2 7.8 260 15-296 82-403 (416)
69 4aow_A Guanine nucleotide-bind 100.0 4.2E-26 1.4E-30 189.5 28.3 191 105-297 31-236 (340)
70 4ggc_A P55CDC, cell division c 100.0 8.7E-28 3E-32 197.8 18.0 246 20-297 43-305 (318)
71 3bg1_A Protein SEC13 homolog; 100.0 2.1E-27 7.1E-32 196.1 20.2 188 107-297 8-237 (316)
72 4e54_B DNA damage-binding prot 100.0 1.8E-28 6.1E-33 211.2 14.4 229 40-295 117-363 (435)
73 2ovr_B FBW7, F-BOX/WD repeat p 100.0 3.3E-28 1.1E-32 210.1 16.0 188 105-298 232-429 (445)
74 3mkq_A Coatomer beta'-subunit; 100.0 5.1E-28 1.7E-32 223.6 18.1 230 37-297 8-249 (814)
75 1yfq_A Cell cycle arrest prote 100.0 3.3E-29 1.1E-33 208.5 9.2 248 16-298 27-314 (342)
76 3sfz_A APAF-1, apoptotic pepti 100.0 1.2E-29 4.2E-34 244.3 7.3 277 16-295 856-1197(1249)
77 3jro_A Fusion protein of prote 100.0 3.8E-28 1.3E-32 222.5 16.7 234 36-298 3-276 (753)
78 3v7d_B Cell division control p 100.0 5.6E-28 1.9E-32 209.6 15.1 246 15-295 135-410 (464)
79 4e54_B DNA damage-binding prot 100.0 4.6E-27 1.6E-31 202.4 20.6 188 107-297 114-317 (435)
80 3dm0_A Maltose-binding peripla 100.0 5.2E-26 1.8E-30 206.9 28.6 190 105-297 375-582 (694)
81 3dw8_B Serine/threonine-protei 100.0 5.8E-28 2E-32 208.3 14.9 239 39-297 25-363 (447)
82 1p22_A F-BOX/WD-repeat protein 100.0 9.5E-29 3.2E-33 212.9 9.8 241 17-297 148-404 (435)
83 3vu4_A KMHSV2; beta-propeller 100.0 4E-27 1.4E-31 197.5 19.4 231 28-297 5-261 (355)
84 3gre_A Serine/threonine-protei 100.0 6.3E-28 2.2E-32 207.7 14.2 266 12-298 76-431 (437)
85 3zwl_B Eukaryotic translation 100.0 9.7E-26 3.3E-30 189.1 27.1 191 105-297 25-239 (369)
86 2xyi_A Probable histone-bindin 100.0 3.9E-27 1.3E-31 202.6 18.8 240 36-296 122-399 (430)
87 3sfz_A APAF-1, apoptotic pepti 100.0 8.5E-28 2.9E-32 231.5 15.8 254 13-297 628-903 (1249)
88 3ei3_B DNA damage-binding prot 100.0 9.8E-26 3.3E-30 190.8 26.2 189 105-297 66-272 (383)
89 3i2n_A WD repeat-containing pr 100.0 8.8E-28 3E-32 200.9 13.3 230 39-297 15-281 (357)
90 3jrp_A Fusion protein of prote 100.0 6.7E-26 2.3E-30 190.8 24.9 191 105-298 4-231 (379)
91 2oaj_A Protein SNI1; WD40 repe 99.9 7.3E-27 2.5E-31 217.3 20.0 228 38-296 13-296 (902)
92 3dwl_C Actin-related protein 2 99.9 4.1E-27 1.4E-31 198.7 16.6 187 107-297 6-226 (377)
93 3gre_A Serine/threonine-protei 99.9 2.3E-26 7.8E-31 198.0 21.3 191 104-297 54-282 (437)
94 1gxr_A ESG1, transducin-like e 99.9 1.3E-25 4.3E-30 186.2 24.8 186 107-297 46-245 (337)
95 4aez_A CDC20, WD repeat-contai 99.9 5E-26 1.7E-30 193.9 21.9 180 110-295 132-322 (401)
96 1k8k_C P40, ARP2/3 complex 41 99.9 2.9E-25 1E-29 186.7 26.2 188 107-297 3-223 (372)
97 3k26_A Polycomb protein EED; W 99.9 2.5E-27 8.7E-32 198.6 13.6 231 40-298 16-309 (366)
98 3odt_A Protein DOA1; ubiquitin 99.9 2.3E-26 8E-31 188.8 18.8 224 36-296 12-244 (313)
99 4a11_B DNA excision repair pro 99.9 2E-25 6.8E-30 189.8 23.9 190 106-297 37-266 (408)
100 2aq5_A Coronin-1A; WD40 repeat 99.9 2.6E-25 8.8E-30 189.5 23.3 188 105-295 74-286 (402)
101 1pgu_A Actin interacting prote 99.9 5.6E-26 1.9E-30 203.3 19.5 229 40-297 16-273 (615)
102 1pgu_A Actin interacting prote 99.9 1.4E-26 4.8E-31 207.2 15.3 264 21-296 38-355 (615)
103 2oaj_A Protein SNI1; WD40 repe 99.9 5.8E-25 2E-29 204.6 26.4 184 109-297 14-232 (902)
104 1yfq_A Cell cycle arrest prote 99.9 8.4E-26 2.9E-30 187.9 18.7 229 39-297 8-272 (342)
105 3dw8_B Serine/threonine-protei 99.9 1.4E-24 4.7E-29 187.1 24.3 185 110-296 26-305 (447)
106 2j04_A TAU60, YPL007P, hypothe 99.9 4.9E-26 1.7E-30 196.3 15.0 177 110-296 83-287 (588)
107 3f3f_A Nucleoporin SEH1; struc 99.9 3.6E-24 1.2E-28 177.8 25.3 189 107-298 6-240 (351)
108 3jro_A Fusion protein of prote 99.9 9.1E-25 3.1E-29 200.2 23.0 190 106-298 3-229 (753)
109 4h5i_A Guanine nucleotide-exch 99.9 1.9E-25 6.6E-30 187.9 16.6 196 40-264 131-344 (365)
110 3lrv_A PRE-mRNA-splicing facto 99.9 8.1E-26 2.8E-30 188.6 13.1 250 16-296 52-322 (343)
111 2w18_A PALB2, fancn, partner a 99.9 2.5E-24 8.7E-29 174.9 21.0 199 88-298 116-348 (356)
112 2vdu_B TRNA (guanine-N(7)-)-me 99.9 7.3E-24 2.5E-28 183.2 24.8 185 109-295 99-326 (450)
113 2w18_A PALB2, fancn, partner a 99.9 1.4E-24 4.7E-29 176.5 18.8 156 106-261 172-355 (356)
114 2xyi_A Probable histone-bindin 99.9 6.4E-24 2.2E-28 182.5 24.0 189 105-296 121-342 (430)
115 3mmy_A MRNA export factor; mRN 99.9 6.8E-24 2.3E-28 177.8 23.0 193 105-298 32-295 (368)
116 2vdu_B TRNA (guanine-N(7)-)-me 99.9 5.3E-25 1.8E-29 190.4 15.9 225 39-294 99-372 (450)
117 3lrv_A PRE-mRNA-splicing facto 99.9 3.9E-24 1.3E-28 178.4 19.7 180 113-296 77-280 (343)
118 1l0q_A Surface layer protein; 99.9 2E-24 6.9E-29 183.0 17.1 242 19-294 9-261 (391)
119 3bws_A Protein LP49; two-domai 99.9 2.1E-24 7.1E-29 185.4 16.9 244 20-296 142-420 (433)
120 4gga_A P55CDC, cell division c 99.9 7.6E-23 2.6E-27 175.3 26.5 183 108-295 143-339 (420)
121 2j04_A TAU60, YPL007P, hypothe 99.9 2.3E-24 7.9E-29 186.0 13.7 202 82-296 14-244 (588)
122 4ggc_A P55CDC, cell division c 99.9 2.6E-24 8.8E-29 177.0 10.3 225 12-265 79-317 (318)
123 1l0q_A Surface layer protein; 99.9 2.3E-21 7.9E-26 164.2 25.2 186 105-295 25-218 (391)
124 3bws_A Protein LP49; two-domai 99.9 3.8E-22 1.3E-26 171.3 18.5 185 108-296 165-364 (433)
125 3vu4_A KMHSV2; beta-propeller 99.9 2.2E-21 7.5E-26 162.6 21.8 240 21-296 39-325 (355)
126 4gq1_A NUP37; propeller, trans 99.9 4.9E-23 1.7E-27 175.0 6.8 217 16-261 105-387 (393)
127 2hqs_A Protein TOLB; TOLB, PAL 99.9 7.1E-21 2.4E-25 162.7 18.5 250 21-296 92-373 (415)
128 2hqs_A Protein TOLB; TOLB, PAL 99.8 2.6E-20 8.9E-25 159.2 14.4 234 22-289 159-410 (415)
129 2oit_A Nucleoporin 214KDA; NH2 99.8 5.2E-19 1.8E-23 151.9 17.9 181 112-295 36-259 (434)
130 2ojh_A Uncharacterized protein 99.8 2.7E-20 9.4E-25 150.9 8.2 246 18-297 18-292 (297)
131 2ojh_A Uncharacterized protein 99.8 6E-17 2.1E-21 131.1 23.1 187 106-296 35-236 (297)
132 1nir_A Nitrite reductase; hemo 99.8 1.4E-18 4.8E-23 153.2 12.5 244 21-295 158-439 (543)
133 1nir_A Nitrite reductase; hemo 99.8 7.8E-17 2.7E-21 142.1 20.7 173 121-296 147-343 (543)
134 3u4y_A Uncharacterized protein 99.7 8.2E-16 2.8E-20 127.1 23.8 186 106-295 34-239 (331)
135 2oit_A Nucleoporin 214KDA; NH2 99.7 1.6E-16 5.4E-21 136.4 18.9 153 110-264 90-279 (434)
136 1pby_B Quinohemoprotein amine 99.7 2E-15 6.8E-20 124.7 24.0 176 114-296 35-299 (337)
137 2z3z_A Dipeptidyl aminopeptida 99.7 8.1E-18 2.8E-22 153.2 10.2 185 108-295 116-374 (706)
138 3vgz_A Uncharacterized protein 99.7 5E-15 1.7E-19 123.2 26.1 177 115-296 143-333 (353)
139 3vgz_A Uncharacterized protein 99.7 1.4E-15 4.9E-20 126.5 22.3 184 111-296 39-250 (353)
140 1ri6_A Putative isomerase YBHE 99.7 2.4E-15 8.2E-20 124.5 22.8 247 21-295 14-295 (343)
141 1xfd_A DIP, dipeptidyl aminope 99.7 5E-17 1.7E-21 148.4 13.6 219 45-294 19-323 (723)
142 1ri6_A Putative isomerase YBHE 99.7 7.6E-15 2.6E-19 121.5 25.1 186 110-295 35-249 (343)
143 2ecf_A Dipeptidyl peptidase IV 99.7 2.8E-17 9.7E-22 150.4 11.2 180 114-296 110-356 (741)
144 1xfd_A DIP, dipeptidyl aminope 99.7 1.7E-16 5.8E-21 144.9 15.7 178 114-295 18-273 (723)
145 2ecf_A Dipeptidyl peptidase IV 99.7 8.8E-16 3E-20 140.6 19.7 180 112-296 36-305 (741)
146 1pby_B Quinohemoprotein amine 99.7 4.5E-15 1.6E-19 122.5 22.1 146 124-272 3-172 (337)
147 3u4y_A Uncharacterized protein 99.7 1.5E-14 5E-19 119.5 23.6 169 124-295 12-194 (331)
148 3hfq_A Uncharacterized protein 99.7 3.6E-14 1.2E-18 118.0 24.5 188 107-296 80-305 (347)
149 2z3z_A Dipeptidyl aminopeptida 99.7 4.2E-15 1.5E-19 135.3 20.0 183 113-296 82-331 (706)
150 1k32_A Tricorn protease; prote 99.7 1.1E-15 3.8E-20 145.0 15.9 225 37-296 198-440 (1045)
151 1jmx_B Amine dehydrogenase; ox 99.7 1.4E-14 4.9E-19 120.2 20.7 172 114-295 44-313 (349)
152 1k32_A Tricorn protease; prote 99.7 6.5E-15 2.2E-19 139.7 19.7 179 111-296 294-491 (1045)
153 1jmx_B Amine dehydrogenase; ox 99.6 1.6E-14 5.5E-19 119.9 19.6 148 121-272 9-184 (349)
154 1z68_A Fibroblast activation p 99.6 1.5E-15 5E-20 138.7 13.7 174 117-294 20-270 (719)
155 1z68_A Fibroblast activation p 99.6 1.6E-15 5.6E-20 138.3 11.6 178 114-293 61-328 (719)
156 3o4h_A Acylamino-acid-releasin 99.6 1.4E-14 4.9E-19 129.0 17.3 176 111-295 20-213 (582)
157 3scy_A Hypothetical bacterial 99.6 3.7E-13 1.3E-17 112.6 23.0 232 41-296 48-325 (361)
158 3o4h_A Acylamino-acid-releasin 99.6 5.3E-14 1.8E-18 125.3 18.4 161 124-296 124-301 (582)
159 3hfq_A Uncharacterized protein 99.6 1.1E-12 3.7E-17 109.1 23.5 186 110-295 37-258 (347)
160 4a5s_A Dipeptidyl peptidase 4 99.6 4.9E-15 1.7E-19 135.6 8.0 177 117-295 66-338 (740)
161 4a5s_A Dipeptidyl peptidase 4 99.5 7.9E-13 2.7E-17 121.1 20.5 174 114-293 18-276 (740)
162 1jof_A Carboxy-CIS,CIS-muconat 99.5 2E-12 6.8E-17 108.4 19.5 183 112-295 39-273 (365)
163 3dsm_A Uncharacterized protein 99.5 9.6E-12 3.3E-16 102.7 22.8 178 114-295 45-243 (328)
164 3pe7_A Oligogalacturonate lyas 99.5 4.9E-12 1.7E-16 106.6 20.9 190 104-295 22-256 (388)
165 2oiz_A Aromatic amine dehydrog 99.5 5.6E-12 1.9E-16 105.5 20.7 178 105-289 44-360 (361)
166 3scy_A Hypothetical bacterial 99.5 7E-12 2.4E-16 104.8 21.0 171 113-285 155-360 (361)
167 3no2_A Uncharacterized protein 99.5 5.1E-12 1.8E-16 101.7 18.7 169 121-296 4-184 (276)
168 1q7f_A NHL, brain tumor CG1071 99.5 7.3E-11 2.5E-15 95.3 24.9 182 110-294 74-268 (286)
169 1xip_A Nucleoporin NUP159; bet 99.4 4.3E-12 1.5E-16 106.0 16.7 166 114-293 39-230 (388)
170 3pe7_A Oligogalacturonate lyas 99.4 6.3E-14 2.2E-18 118.2 4.8 184 109-294 77-307 (388)
171 3fvz_A Peptidyl-glycine alpha- 99.4 1.1E-10 3.9E-15 96.3 24.1 179 112-292 23-255 (329)
172 1q7f_A NHL, brain tumor CG1071 99.4 1.4E-10 4.9E-15 93.5 23.3 183 110-295 27-225 (286)
173 1qks_A Cytochrome CD1 nitrite 99.4 8.8E-11 3E-15 103.6 23.1 172 124-296 169-361 (567)
174 3fvz_A Peptidyl-glycine alpha- 99.4 4.9E-11 1.7E-15 98.5 20.4 184 110-295 88-310 (329)
175 3e5z_A Putative gluconolactona 99.4 2.7E-10 9.1E-15 92.5 23.5 185 105-296 61-276 (296)
176 3azo_A Aminopeptidase; POP fam 99.4 2.4E-11 8.4E-16 109.7 19.0 179 111-294 128-354 (662)
177 3azo_A Aminopeptidase; POP fam 99.4 2.6E-11 9E-16 109.5 18.7 185 108-295 19-260 (662)
178 1jof_A Carboxy-CIS,CIS-muconat 99.4 1.1E-10 3.8E-15 97.8 21.3 169 124-296 4-212 (365)
179 3no2_A Uncharacterized protein 99.4 1.2E-09 4.2E-14 87.7 25.0 186 105-295 28-231 (276)
180 3e5z_A Putative gluconolactona 99.3 4.4E-10 1.5E-14 91.2 21.6 186 103-294 18-235 (296)
181 3c5m_A Oligogalacturonate lyas 99.3 2.5E-12 8.4E-17 108.6 8.0 172 118-295 86-301 (396)
182 3dsm_A Uncharacterized protein 99.3 7.3E-10 2.5E-14 91.4 22.5 176 113-293 84-284 (328)
183 2oiz_A Aromatic amine dehydrog 99.3 1.7E-10 5.9E-15 96.5 18.0 98 130-228 29-146 (361)
184 3c5m_A Oligogalacturonate lyas 99.3 5.3E-11 1.8E-15 100.4 14.5 180 115-296 38-257 (396)
185 3nol_A Glutamine cyclotransfer 99.3 3.9E-09 1.3E-13 82.5 23.1 191 105-298 34-247 (262)
186 1rwi_B Serine/threonine-protei 99.3 2.2E-09 7.4E-14 85.7 21.2 180 113-295 67-252 (270)
187 3g4e_A Regucalcin; six bladed 99.2 5.7E-09 2E-13 84.7 23.7 181 111-295 52-260 (297)
188 2xdw_A Prolyl endopeptidase; a 99.2 8.9E-10 3E-14 100.4 20.7 184 111-295 123-354 (710)
189 1pjx_A Dfpase, DIISOPROPYLFLUO 99.2 3.2E-09 1.1E-13 86.6 22.1 181 111-295 69-286 (314)
190 2dg1_A DRP35, lactonase; beta 99.2 9.3E-09 3.2E-13 84.7 24.7 183 110-295 84-298 (333)
191 2dg1_A DRP35, lactonase; beta 99.2 9.9E-09 3.4E-13 84.5 24.8 186 105-294 37-250 (333)
192 3mbr_X Glutamine cyclotransfer 99.2 1.4E-08 4.7E-13 78.8 23.4 191 105-298 12-226 (243)
193 2xdw_A Prolyl endopeptidase; a 99.2 2.7E-09 9.2E-14 97.3 22.9 201 88-292 129-395 (710)
194 2iwa_A Glutamine cyclotransfer 99.2 8.2E-09 2.8E-13 81.6 21.6 180 115-295 23-224 (266)
195 3nok_A Glutaminyl cyclase; bet 99.2 6.3E-09 2.2E-13 81.4 20.4 181 115-298 57-257 (268)
196 1rwi_B Serine/threonine-protei 99.2 3.9E-09 1.3E-13 84.1 20.1 179 114-294 25-209 (270)
197 2ghs_A AGR_C_1268P; regucalcin 99.2 2.9E-08 9.8E-13 81.7 25.0 178 112-295 89-290 (326)
198 2gop_A Trilobed protease; beta 99.2 8.8E-09 3E-13 85.3 20.9 164 115-295 106-318 (347)
199 2gop_A Trilobed protease; beta 99.1 3.7E-09 1.3E-13 87.5 18.2 169 113-296 59-281 (347)
200 2bkl_A Prolyl endopeptidase; m 99.1 2.3E-09 7.7E-14 97.5 17.6 183 110-295 118-337 (695)
201 2z2n_A Virginiamycin B lyase; 99.1 1.1E-07 3.9E-12 76.6 25.8 181 109-294 11-200 (299)
202 2bkl_A Prolyl endopeptidase; m 99.1 7.6E-09 2.6E-13 94.1 19.6 201 88-292 125-378 (695)
203 1qks_A Cytochrome CD1 nitrite 99.1 6.6E-08 2.3E-12 85.3 24.5 158 114-272 198-382 (567)
204 3hrp_A Uncharacterized protein 99.1 1.2E-07 4.1E-12 80.5 24.9 179 114-295 132-341 (409)
205 2z2n_A Virginiamycin B lyase; 99.0 6.3E-07 2.2E-11 72.1 26.6 179 111-294 55-242 (299)
206 2hz6_A Endoplasmic reticulum t 99.0 9.7E-11 3.3E-15 98.3 3.8 146 121-271 8-157 (369)
207 2mad_H Methylamine dehydrogena 99.0 3.5E-07 1.2E-11 76.6 24.8 171 117-295 70-337 (373)
208 1pjx_A Dfpase, DIISOPROPYLFLUO 99.0 1.5E-07 5E-12 76.6 21.6 179 111-294 16-243 (314)
209 1xip_A Nucleoporin NUP159; bet 99.0 2E-08 6.7E-13 84.0 14.9 130 110-249 86-230 (388)
210 1yr2_A Prolyl oligopeptidase; 98.9 2.9E-07 1E-11 84.3 23.0 201 88-292 167-422 (741)
211 1yr2_A Prolyl oligopeptidase; 98.9 8.2E-08 2.8E-12 87.9 19.2 180 111-295 161-381 (741)
212 2qe8_A Uncharacterized protein 98.9 4.4E-07 1.5E-11 75.1 21.5 185 110-295 64-309 (343)
213 2qc5_A Streptogramin B lactona 98.9 4.9E-06 1.7E-10 66.9 26.1 181 110-294 17-205 (300)
214 3hrp_A Uncharacterized protein 98.9 1.1E-06 3.6E-11 74.7 22.9 175 118-295 176-398 (409)
215 3c75_H MADH, methylamine dehyd 98.9 1.1E-07 3.8E-12 80.6 16.2 97 132-229 99-216 (426)
216 3dr2_A Exported gluconolactona 98.8 4.9E-07 1.7E-11 73.5 18.9 183 106-296 79-296 (305)
217 2qc5_A Streptogramin B lactona 98.8 8.6E-06 2.9E-10 65.4 26.2 177 112-294 61-247 (300)
218 3g4e_A Regucalcin; six bladed 98.8 1.7E-06 5.9E-11 70.0 21.8 174 116-294 16-216 (297)
219 3sjl_D Methylamine dehydrogena 98.8 3E-07 1E-11 76.7 16.5 143 121-267 42-213 (386)
220 3iuj_A Prolyl endopeptidase; h 98.8 2.1E-07 7.2E-12 84.5 16.9 179 110-295 126-344 (693)
221 2hz6_A Endoplasmic reticulum t 98.8 3E-09 1E-13 89.2 3.8 163 121-290 47-217 (369)
222 1yiq_A Quinohemoprotein alcoho 98.8 6.7E-07 2.3E-11 81.0 18.7 174 118-293 240-534 (689)
223 3dr2_A Exported gluconolactona 98.8 2.5E-06 8.6E-11 69.3 20.5 183 106-294 38-256 (305)
224 2ghs_A AGR_C_1268P; regucalcin 98.8 4E-06 1.4E-10 68.8 21.8 172 116-294 52-247 (326)
225 2mad_H Methylamine dehydrogena 98.7 3.6E-06 1.2E-10 70.5 21.6 130 133-269 48-201 (373)
226 1kb0_A Quinohemoprotein alcoho 98.7 4.1E-07 1.4E-11 82.2 16.8 158 133-292 284-535 (677)
227 3sjl_D Methylamine dehydrogena 98.7 5.1E-06 1.7E-10 69.3 22.0 172 118-295 142-350 (386)
228 2ece_A 462AA long hypothetical 98.7 3.2E-06 1.1E-10 71.3 20.1 175 121-295 147-399 (462)
229 1fwx_A Nitrous oxide reductase 98.7 5.9E-07 2E-11 78.3 15.7 181 114-297 135-408 (595)
230 3hxj_A Pyrrolo-quinoline quino 98.7 1.6E-06 5.4E-11 71.0 16.5 172 113-293 137-311 (330)
231 1mda_H Methylamine dehydrogena 98.6 1.6E-06 5.3E-11 72.2 16.2 176 105-286 59-366 (368)
232 2ece_A 462AA long hypothetical 98.6 6.8E-06 2.3E-10 69.3 18.9 173 124-297 98-341 (462)
233 1mda_H Methylamine dehydrogena 98.6 2.1E-06 7.3E-11 71.4 15.8 97 124-221 34-157 (368)
234 3hxj_A Pyrrolo-quinoline quino 98.6 3.6E-06 1.2E-10 68.8 16.9 164 121-293 106-271 (330)
235 3q7m_A Lipoprotein YFGL, BAMB; 98.6 2E-06 6.7E-11 72.1 15.0 148 121-273 187-347 (376)
236 3iuj_A Prolyl endopeptidase; h 98.5 8.7E-06 3E-10 73.9 19.2 200 88-293 133-387 (693)
237 3q7m_A Lipoprotein YFGL, BAMB; 98.5 1E-05 3.5E-10 67.7 18.1 151 120-272 51-216 (376)
238 1kb0_A Quinohemoprotein alcoho 98.5 7.1E-06 2.4E-10 74.2 16.7 172 121-295 173-495 (677)
239 1fwx_A Nitrous oxide reductase 98.4 2.4E-05 8.3E-10 68.3 17.8 168 124-296 104-349 (595)
240 1npe_A Nidogen, entactin; glyc 98.4 0.0003 1E-08 55.7 22.9 175 113-289 79-263 (267)
241 1yiq_A Quinohemoprotein alcoho 98.3 5.9E-05 2E-09 68.4 19.1 151 119-270 118-345 (689)
242 3c75_H MADH, methylamine dehyd 98.3 3.9E-05 1.3E-09 65.0 16.3 182 88-270 181-409 (426)
243 2iwa_A Glutamine cyclotransfer 98.3 5.1E-05 1.7E-09 59.9 15.6 145 118-264 71-238 (266)
244 1kv9_A Type II quinohemoprotei 98.3 7E-05 2.4E-09 67.6 18.2 175 118-294 235-519 (668)
245 2ad6_A Methanol dehydrogenase 98.2 0.00014 4.7E-09 64.4 19.3 159 133-293 273-523 (571)
246 2qe8_A Uncharacterized protein 98.2 9.9E-05 3.4E-09 60.9 17.4 151 144-296 11-214 (343)
247 3nol_A Glutamine cyclotransfer 98.2 0.00014 4.9E-09 56.8 16.4 149 143-296 32-189 (262)
248 1flg_A Protein (quinoprotein e 98.2 0.00019 6.6E-09 63.6 19.0 79 212-292 465-544 (582)
249 1npe_A Nidogen, entactin; glyc 98.1 0.002 6.7E-08 50.9 24.4 177 113-295 36-225 (267)
250 3nok_A Glutaminyl cyclase; bet 98.1 0.00027 9.2E-09 55.4 15.7 148 143-296 44-198 (268)
251 1w6s_A Methanol dehydrogenase 98.1 0.00049 1.7E-08 61.1 19.4 80 211-293 451-533 (599)
252 3qqz_A Putative uncharacterize 98.1 0.0021 7.3E-08 50.3 23.0 186 107-294 21-241 (255)
253 3amr_A 3-phytase; beta-propell 98.1 0.0025 8.5E-08 52.1 21.3 169 124-295 42-250 (355)
254 2ad6_A Methanol dehydrogenase 98.0 0.00075 2.6E-08 59.7 19.6 152 119-272 112-344 (571)
255 4a2l_A BT_4663, two-component 98.0 0.0027 9.4E-08 58.5 24.1 180 113-294 310-515 (795)
256 4a2l_A BT_4663, two-component 98.0 0.0023 7.9E-08 59.0 23.5 178 113-294 263-469 (795)
257 2p4o_A Hypothetical protein; p 98.0 0.0035 1.2E-07 50.6 21.9 180 113-296 72-277 (306)
258 3v65_B Low-density lipoprotein 98.0 0.0042 1.4E-07 52.1 22.5 175 116-294 80-263 (386)
259 2fp8_A Strictosidine synthase; 98.0 0.0026 8.8E-08 51.8 20.6 177 114-293 81-299 (322)
260 3v64_C Agrin; beta propeller, 98.0 0.0053 1.8E-07 50.7 23.3 179 113-294 34-220 (349)
261 3mbr_X Glutamine cyclotransfer 98.0 0.0019 6.4E-08 50.0 18.2 149 142-295 9-166 (243)
262 1ijq_A LDL receptor, low-densi 97.9 0.0053 1.8E-07 49.9 24.1 161 132-294 10-181 (316)
263 2fp8_A Strictosidine synthase; 97.9 0.0029 1E-07 51.4 19.9 175 115-294 21-246 (322)
264 1w6s_A Methanol dehydrogenase 97.9 0.0023 7.9E-08 56.8 19.5 145 125-271 124-350 (599)
265 3p5b_L Low density lipoprotein 97.8 0.011 3.7E-07 49.8 23.2 168 124-294 85-263 (400)
266 1kv9_A Type II quinohemoprotei 97.8 0.00088 3E-08 60.5 16.2 151 121-272 65-288 (668)
267 3v9f_A Two-component system se 97.8 0.0085 2.9E-07 55.1 22.7 180 112-294 312-512 (781)
268 3v9f_A Two-component system se 97.8 0.0081 2.8E-07 55.2 22.5 180 113-294 363-556 (781)
269 3m0c_C LDL receptor, low-densi 97.6 0.03 1E-06 51.4 23.8 161 130-294 402-575 (791)
270 3tc9_A Hypothetical hydrolase; 97.6 0.0038 1.3E-07 53.1 16.4 138 154-294 139-287 (430)
271 2p4o_A Hypothetical protein; p 97.6 0.019 6.6E-07 46.2 20.6 175 113-293 32-228 (306)
272 1fs1_A SKP2 F-BOX, cyclin A/CD 97.6 5.2E-05 1.8E-09 43.7 3.0 47 20-66 5-51 (53)
273 2xe4_A Oligopeptidase B; hydro 97.5 0.009 3.1E-07 54.7 18.9 148 114-263 175-354 (751)
274 1flg_A Protein (quinoprotein e 97.5 0.0015 5.1E-08 57.9 13.1 129 124-252 338-549 (582)
275 3sov_A LRP-6, low-density lipo 97.5 0.029 9.9E-07 45.6 19.8 160 131-294 12-183 (318)
276 3v65_B Low-density lipoprotein 97.4 0.043 1.5E-06 45.9 24.1 169 114-284 117-296 (386)
277 2xe4_A Oligopeptidase B; hydro 97.4 0.0032 1.1E-07 57.7 13.7 136 156-293 178-336 (751)
278 1k3i_A Galactose oxidase precu 97.4 0.0063 2.2E-07 54.8 15.3 177 118-296 248-475 (656)
279 3tc9_A Hypothetical hydrolase; 97.2 0.039 1.3E-06 46.9 18.2 145 116-262 140-300 (430)
280 4hw6_A Hypothetical protein, I 97.2 0.017 6E-07 49.1 15.3 140 154-295 141-291 (433)
281 1n7d_A LDL receptor, low-densi 97.2 0.0027 9.3E-08 57.6 10.7 162 131-294 385-557 (699)
282 3v64_C Agrin; beta propeller, 97.2 0.077 2.6E-06 43.6 25.3 168 114-284 74-253 (349)
283 3sov_A LRP-6, low-density lipo 97.1 0.072 2.5E-06 43.2 20.2 156 115-271 81-246 (318)
284 2p9w_A MAL S 1 allergenic prot 97.1 0.068 2.3E-06 43.3 17.0 149 115-264 15-216 (334)
285 4hw6_A Hypothetical protein, I 97.0 0.13 4.3E-06 43.8 21.5 146 115-262 141-303 (433)
286 1n7d_A LDL receptor, low-densi 96.8 0.006 2.1E-07 55.3 9.9 156 117-273 457-624 (699)
287 3l2o_B F-box only protein 4; s 96.7 0.0011 3.8E-08 52.4 3.6 52 21-72 2-53 (312)
288 3kya_A Putative phosphatase; s 96.7 0.083 2.9E-06 45.5 15.2 138 155-294 142-327 (496)
289 4a0p_A LRP6, LRP-6, low-densit 96.6 0.34 1.2E-05 43.3 23.3 169 122-294 6-183 (628)
290 1ijq_A LDL receptor, low-densi 96.6 0.2 6.9E-06 40.4 24.2 171 113-285 30-217 (316)
291 2vpj_A Kelch-like protein 12; 96.6 0.2 6.7E-06 39.9 16.6 144 121-265 62-233 (301)
292 3m0c_C LDL receptor, low-densi 96.6 0.43 1.5E-05 43.8 25.8 174 112-285 423-611 (791)
293 2p9w_A MAL S 1 allergenic prot 96.5 0.25 8.4E-06 40.1 16.1 138 156-295 17-203 (334)
294 2xn4_A Kelch-like protein 2; s 96.4 0.28 9.6E-06 39.1 18.0 143 121-265 61-231 (302)
295 3ii7_A Kelch-like protein 7; p 96.4 0.22 7.7E-06 39.7 15.4 172 121-296 55-256 (306)
296 4a0p_A LRP6, LRP-6, low-densit 96.3 0.58 2E-05 41.8 21.4 157 114-271 81-245 (628)
297 3p5b_L Low density lipoprotein 96.2 0.43 1.5E-05 40.0 26.1 174 111-284 110-298 (400)
298 3s94_A LRP-6, low-density lipo 96.2 0.62 2.1E-05 41.5 21.2 162 131-294 17-188 (619)
299 1k3i_A Galactose oxidase precu 96.1 0.24 8.3E-06 44.5 15.9 125 140-265 174-325 (656)
300 3pbp_A Nucleoporin NUP82; beta 96.0 0.58 2E-05 39.3 16.0 133 124-259 34-208 (452)
301 3ii7_A Kelch-like protein 7; p 95.9 0.48 1.6E-05 37.8 15.7 141 124-265 14-180 (306)
302 2ism_A Putative oxidoreductase 95.9 0.54 1.8E-05 38.6 15.8 99 152-251 31-153 (352)
303 1zgk_A Kelch-like ECH-associat 95.9 0.49 1.7E-05 37.8 15.2 132 132-265 90-242 (308)
304 2vpj_A Kelch-like protein 12; 95.8 0.45 1.5E-05 37.8 14.8 143 122-265 112-280 (301)
305 3s94_A LRP-6, low-density lipo 95.7 1 3.5E-05 40.2 19.1 159 113-271 84-251 (619)
306 2xbg_A YCF48-like protein; pho 95.7 0.64 2.2E-05 37.6 21.6 177 113-295 122-311 (327)
307 2be1_A Serine/threonine-protei 95.7 0.029 9.8E-07 45.9 7.0 108 123-230 11-138 (339)
308 4asc_A Kelch repeat and BTB do 95.7 0.64 2.2E-05 37.2 16.6 160 134-296 69-252 (315)
309 2e31_A FBS1, F-box only protei 95.6 0.0091 3.1E-07 47.5 3.9 52 21-72 48-100 (297)
310 2xzh_A Clathrin heavy chain 1; 95.6 0.7 2.4E-05 37.4 22.7 50 233-284 259-309 (365)
311 2xn4_A Kelch-like protein 2; s 95.6 0.66 2.3E-05 36.8 15.4 143 121-265 108-278 (302)
312 3kya_A Putative phosphatase; s 95.5 1 3.6E-05 38.8 17.1 144 116-261 142-339 (496)
313 3ott_A Two-component system se 95.3 1.7 5.8E-05 39.7 21.1 174 113-293 63-248 (758)
314 3ei3_A DNA damage-binding prot 95.2 1.1 3.8E-05 43.1 17.1 154 132-291 807-984 (1158)
315 3sre_A PON1, serum paraoxonase 95.1 1.1 3.9E-05 36.7 21.0 160 130-295 81-285 (355)
316 2woz_A Kelch repeat and BTB do 95.0 1.1 3.7E-05 36.0 15.7 130 134-265 80-233 (318)
317 1bpo_A Protein (clathrin); cla 95.0 1.4 4.9E-05 37.2 23.5 51 233-285 258-309 (494)
318 3pbp_A Nucleoporin NUP82; beta 94.9 1.5 5.1E-05 36.9 18.4 135 157-293 26-196 (452)
319 3a9g_A Putative uncharacterize 94.8 1.4 4.7E-05 36.2 16.8 135 153-293 30-214 (354)
320 3ei3_A DNA damage-binding prot 94.8 3.2 0.00011 40.0 19.7 136 124-263 846-999 (1158)
321 2xbg_A YCF48-like protein; pho 94.8 1.3 4.6E-05 35.7 22.4 179 113-295 80-268 (327)
322 3qqz_A Putative uncharacterize 94.6 1.2 4.1E-05 34.7 17.5 140 153-292 27-188 (255)
323 4asc_A Kelch repeat and BTB do 94.6 0.84 2.9E-05 36.5 12.8 133 132-265 117-279 (315)
324 2uvk_A YJHT; unknown function, 94.5 1.1 3.9E-05 36.4 13.7 121 172-296 168-325 (357)
325 1zgk_A Kelch-like ECH-associat 94.2 1.5 5.3E-05 34.9 13.6 140 124-265 124-289 (308)
326 2woz_A Kelch repeat and BTB do 94.2 1.7 5.7E-05 34.8 13.7 145 121-266 109-290 (318)
327 2be1_A Serine/threonine-protei 94.1 0.12 4.2E-06 42.1 6.7 109 165-273 13-140 (339)
328 2g8s_A Glucose/sorbosone dehyd 93.4 2.7 9.2E-05 34.4 14.6 29 153-181 19-48 (353)
329 2xzh_A Clathrin heavy chain 1; 92.9 3.2 0.00011 33.7 16.3 119 173-296 50-171 (365)
330 3sre_A PON1, serum paraoxonase 92.8 3.4 0.00012 33.9 16.6 79 212-295 138-239 (355)
331 3amr_A 3-phytase; beta-propell 92.8 3.4 0.00012 33.8 17.7 140 131-271 98-272 (355)
332 2zwa_A Leucine carboxyl methyl 92.7 4.4 0.00015 36.6 15.2 173 122-295 451-673 (695)
333 2ism_A Putative oxidoreductase 92.7 3.5 0.00012 33.7 19.0 58 235-294 269-332 (352)
334 1bpo_A Protein (clathrin); cla 92.6 4.3 0.00015 34.4 14.6 120 172-296 48-170 (494)
335 3ott_A Two-component system se 92.5 6 0.00021 36.0 24.0 174 114-292 104-294 (758)
336 1tl2_A L10, protein (tachylect 91.6 3.5 0.00012 31.3 14.7 166 124-294 6-199 (236)
337 1xi4_A Clathrin heavy chain; a 91.4 6.3 0.00022 38.7 14.8 162 113-275 106-301 (1630)
338 3sbq_A Nitrous-oxide reductase 91.1 3.1 0.00011 36.4 11.3 100 196-298 327-456 (638)
339 1cru_A Protein (soluble quinop 89.7 8.7 0.0003 32.7 18.2 31 152-182 27-58 (454)
340 2uvk_A YJHT; unknown function, 87.6 9.9 0.00034 30.7 15.1 49 213-261 168-224 (357)
341 3sbq_A Nitrous-oxide reductase 87.4 5 0.00017 35.1 10.0 119 134-252 300-454 (638)
342 3das_A Putative oxidoreductase 84.5 15 0.00052 29.9 18.0 139 151-293 31-218 (347)
343 1tl2_A L10, protein (tachylect 83.9 12 0.00042 28.4 12.7 66 114-181 42-116 (236)
344 3f7f_A Nucleoporin NUP120; nuc 83.1 2.5 8.5E-05 38.1 6.4 38 113-150 222-259 (729)
345 3zwu_A Alkaline phosphatase PH 82.0 6.6 0.00023 34.7 8.6 59 236-295 478-549 (592)
346 2ast_B S-phase kinase-associat 80.7 0.43 1.5E-05 38.6 0.7 45 21-65 6-50 (336)
347 4a9v_A PHOX; hydrolase, beta-p 79.8 12 0.0004 32.9 9.3 60 235-295 477-549 (592)
348 3a9g_A Putative uncharacterize 79.7 23 0.0008 28.8 23.8 96 113-209 29-152 (354)
349 2zwa_A Leucine carboxyl methyl 79.4 36 0.0012 30.7 18.6 145 121-265 397-579 (695)
350 1xi4_A Clathrin heavy chain; a 78.7 21 0.0007 35.4 11.2 120 173-297 49-171 (1630)
351 4gq2_M Nucleoporin NUP120; bet 78.6 3.4 0.00012 38.9 6.1 37 235-271 237-274 (950)
352 4gq2_M Nucleoporin NUP120; bet 77.5 15 0.00051 34.7 10.0 36 114-149 237-274 (950)
353 3s25_A Hypothetical 7-bladed b 72.7 34 0.0012 27.1 16.7 124 157-295 58-202 (302)
354 3q6k_A 43.2 kDa salivary prote 72.4 40 0.0014 27.9 10.8 84 213-296 123-243 (381)
355 4fhn_B Nucleoporin NUP120; pro 71.6 3.6 0.00012 39.6 4.4 36 236-271 240-276 (1139)
356 3f7f_A Nucleoporin NUP120; nuc 69.9 8.4 0.00029 34.8 6.0 37 235-272 223-259 (729)
357 3das_A Putative oxidoreductase 67.4 49 0.0017 26.9 18.1 105 105-209 24-157 (347)
358 2wg3_C Hedgehog-interacting pr 67.3 58 0.002 27.7 12.6 100 196-295 18-157 (463)
359 3uc1_A DNA gyrase subunit A; D 65.0 53 0.0018 26.4 16.3 149 113-262 95-278 (327)
360 3no0_A DNA gyrase subunit A; D 63.1 52 0.0018 25.7 16.7 149 112-262 67-245 (276)
361 4fhn_B Nucleoporin NUP120; pro 58.4 12 0.0004 36.1 5.1 29 121-149 247-276 (1139)
362 3qhy_B Beta-lactamase inhibito 50.2 88 0.003 24.3 14.2 144 113-264 102-247 (282)
363 2p1m_B Transport inhibitor res 50.0 6.9 0.00024 34.2 2.0 37 22-58 4-41 (594)
364 3s25_A Hypothetical 7-bladed b 49.9 93 0.0032 24.5 16.2 143 132-294 88-240 (302)
365 1cru_A Protein (soluble quinop 43.7 1.5E+02 0.005 25.0 20.5 98 113-210 27-162 (454)
366 2g8s_A Glucose/sorbosone dehyd 41.9 1.4E+02 0.0046 24.1 15.0 135 114-249 19-213 (353)
367 3qhy_B Beta-lactamase inhibito 40.7 1.3E+02 0.0043 23.4 14.6 141 114-263 64-207 (282)
368 3uc1_A DNA gyrase subunit A; D 33.4 1.9E+02 0.0063 23.2 17.6 138 124-262 5-175 (327)
369 4gz8_A Semaphorin-3A; multi-do 29.7 1.1E+02 0.0037 27.5 6.2 53 245-297 430-490 (667)
370 1q47_A Semaphorin 3A; beta pro 25.2 2.4E+02 0.0082 24.2 7.4 63 235-297 405-482 (495)
371 3ogk_B Coronatine-insensitive 23.8 25 0.00085 30.7 1.2 34 26-59 15-49 (592)
372 3mez_A Mannose-specific lectin 22.7 1.6E+02 0.0055 19.0 7.3 15 205-219 87-101 (111)
373 1ukf_A Avirulence protein AVRP 21.3 1E+02 0.0035 22.4 3.6 33 233-265 118-152 (188)
374 1q47_A Semaphorin 3A; beta pro 20.3 2.6E+02 0.009 23.9 6.7 53 206-258 424-487 (495)
No 1
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=3.7e-37 Score=263.44 Aligned_cols=247 Identities=15% Similarity=0.164 Sum_probs=213.3
Q ss_pred CcchhccCcHHHHHHHhhccCccchhhHHHhhhhHHHHhhhhhHHHHHHhhhcCCCCCCCchhhhhhhhhhhccccceee
Q 022324 20 PRATIESLNGDIICMIFSSLGFFDLVRCSAVCKSWNAIINRCKLLQLLYCKLHGFSNTSGSSMRLHLEELAMKHHRFALE 99 (299)
Q Consensus 20 ~~~~~~~~~~~~~~~i~~~~~h~~~v~~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~ 99 (299)
.+.++++|+.+....+..+.+|.+.|.+++|+|+++++++ ...|+++++|. +.
T Consensus 128 ~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~s----------------gs~D~~i~iwd--~~--------- 180 (410)
T 1vyh_C 128 EDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLAS----------------CSADMTIKLWD--FQ--------- 180 (410)
T ss_dssp SSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEE----------------EETTSCCCEEE--TT---------
T ss_pred CCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEE----------------EeCCCeEEEEe--CC---------
Confidence 5678999999988878888899999999999999999887 33678888883 22
Q ss_pred cCceeeEEeeccccCeeEEEe-cCC-EEEEEeCCCcEEEEecCCceeEEEecCCCceeE-EEEecCCCEEE-EEcCCeEE
Q 022324 100 EGRIDIDQWKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNAASL-VDFDFDESKIV-GLIGTRIC 175 (299)
Q Consensus 100 ~g~~~~~~~~~h~~~i~~~~~-~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~-~~~d~~i~ 175 (299)
+...++++.+|...|.++.| +++ +|++|+.|++|++||+.+++++..+..|...+. +.+++++.+++ ++.|+.|+
T Consensus 181 -~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~ 259 (410)
T 1vyh_C 181 -GFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVR 259 (410)
T ss_dssp -SSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred -CCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEE
Confidence 12235667899999999999 565 999999999999999999999999998876555 99999999999 99999999
Q ss_pred EEecCCce--eeeeccCCccceeeeeccC--------------------CCeEEEecCCCcEEEEEcCCcceeeeccccC
Q 022324 176 IWRRNGLR--SVFPSREGTFMKGLCMRYF--------------------DPEAVVGCEDGTARVFDMYSRKCSQIIRMHC 233 (299)
Q Consensus 176 v~d~~~~~--~~~~~~~~~~~~~~~~~~~--------------------~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~ 233 (299)
+||+.+.. ..+..+...+. .++++|. ++.+++|+.|+.|++||+++++++..+.+|.
T Consensus 260 vwd~~~~~~~~~~~~h~~~v~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~ 338 (410)
T 1vyh_C 260 VWVVATKECKAELREHRHVVE-CISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHD 338 (410)
T ss_dssp EEETTTCCEEEEECCCSSCEE-EEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCS
T ss_pred EEECCCCceeeEecCCCceEE-EEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECCC
Confidence 99998775 33444544433 4566664 4569999999999999999999999999999
Q ss_pred CceeEEEeCCC-CeEEEEeCCCcEEEEeCCCCceEEEeeccCCCCcEEEEEccCCCCeEEeeecc
Q 022324 234 APVTSLSLSED-QLIISGSSLGSIAISGLSSDQRVATLRSTDCTGHIICLMYPQFLHMLFFLCFL 297 (299)
Q Consensus 234 ~~i~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~s~s~~ 297 (299)
..|.+++|+|+ ++|++|+.|+.|++||+++++++.++..|.. .|++++|+|++.+|++||.-
T Consensus 339 ~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~h~~--~v~~l~~~~~~~~l~sgs~D 401 (410)
T 1vyh_C 339 NWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEH--FVTSLDFHKTAPYVVTGSVD 401 (410)
T ss_dssp SCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSS--CEEEEEECSSSSCEEEEETT
T ss_pred CcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCC--cEEEEEEcCCCCEEEEEeCC
Confidence 99999999999 9999999999999999999999999999988 89999999999999999864
No 2
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=2e-36 Score=248.84 Aligned_cols=256 Identities=17% Similarity=0.163 Sum_probs=209.8
Q ss_pred CCCCCCCCCCcchhccCcHHHHHHHhhccCccchhhHHHhhhhHHHHhhhhhHHHHHHhhhcCCCCCCCchhhhhhhhhh
Q 022324 11 PPPKKRSSKPRATIESLNGDIICMIFSSLGFFDLVRCSAVCKSWNAIINRCKLLQLLYCKLHGFSNTSGSSMRLHLEELA 90 (299)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~h~~~v~~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~d~~~~~~~~~~~ 90 (299)
+.+....+..+.++++|+.+....+..+..|...|.+++|+++++++++ ...|+.+++|.. .
T Consensus 24 ~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s----------------~s~d~~i~vwd~--~ 85 (304)
T 2ynn_A 24 TEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIV----------------GSDDFRIRVFNY--N 85 (304)
T ss_dssp SSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEE----------------EETTSEEEEEET--T
T ss_pred CCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEE----------------ECCCCEEEEEEC--C
Confidence 3444556667889999999988888888899999999999999999987 336788888832 2
Q ss_pred hccccceeecCceeeEEeeccccCeeEEEe-cCC-EEEEEeCCCcEEEEecCCc-eeEEEecCCCcee-EEEEec-CCCE
Q 022324 91 MKHHRFALEEGRIDIDQWKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGY-KCVEEYSLPNAAS-LVDFDF-DESK 165 (299)
Q Consensus 91 ~~~~~~~l~~g~~~~~~~~~h~~~i~~~~~-~~~-~l~s~~~dg~i~iwd~~~~-~~~~~~~~~~~~~-~~~~~~-~~~~ 165 (299)
.. ..+..+++|.+.|.++.| |++ +|++|+.|++|++||+.++ .....+..|...+ +++|+| ++..
T Consensus 86 ~~----------~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~ 155 (304)
T 2ynn_A 86 TG----------EKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPST 155 (304)
T ss_dssp TC----------CEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTE
T ss_pred CC----------cEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCE
Confidence 22 234567899999999999 666 9999999999999999887 5566777776554 599999 5678
Q ss_pred EE-EEcCCeEEEEecCCceeeeeccCC--ccceeeeecc--CCCeEEEecCCCcEEEEEcCCcceeeeccccCCceeEEE
Q 022324 166 IV-GLIGTRICIWRRNGLRSVFPSREG--TFMKGLCMRY--FDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLS 240 (299)
Q Consensus 166 l~-~~~d~~i~v~d~~~~~~~~~~~~~--~~~~~~~~~~--~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~~~ 240 (299)
++ ++.|+.|++||+++.........+ .....+++.+ +++++++|+.|+.|++||+++++++..+.+|...|.+++
T Consensus 156 l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~ 235 (304)
T 2ynn_A 156 FASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAV 235 (304)
T ss_dssp EEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEE
T ss_pred EEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEEEE
Confidence 88 999999999999876533322221 2222445655 556799999999999999999999999999999999999
Q ss_pred eCCC-CeEEEEeCCCcEEEEeCCCCceEEEeeccCCCCcEEEEEccCCCC--eEEeeec
Q 022324 241 LSED-QLIISGSSLGSIAISGLSSDQRVATLRSTDCTGHIICLMYPQFLH--MLFFLCF 296 (299)
Q Consensus 241 ~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~g~--~l~s~s~ 296 (299)
|+|+ .+|++|+.||+|++||++++++++++..+.. .+.+++|+|++. ++++|+.
T Consensus 236 ~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~asg~~ 292 (304)
T 2ynn_A 236 FHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLE--RSWCIATHPTGRKNYIASGFD 292 (304)
T ss_dssp ECSSSSEEEEEETTSCEEEEETTTCCEEEEECCSSS--SEEEEEECTTCGGGCEEEEET
T ss_pred ECCCCCEEEEEcCCCeEEEEECCCCceeeeccCCCc--cEEEEEECCCCCceEEEEecC
Confidence 9999 9999999999999999999999999998887 899999999875 5777764
No 3
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=8.2e-36 Score=248.97 Aligned_cols=259 Identities=15% Similarity=0.135 Sum_probs=214.9
Q ss_pred CCCCCCCCcchhccCcHHHHHHHhhccCccchhhHHHhhhhHHHHhhhhhHHHHHHhhhcCCCCCCCchhhhhhhhhhhc
Q 022324 13 PKKRSSKPRATIESLNGDIICMIFSSLGFFDLVRCSAVCKSWNAIINRCKLLQLLYCKLHGFSNTSGSSMRLHLEELAMK 92 (299)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~h~~~v~~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 92 (299)
+....++.+.++++|+......+..+..|...|.+++|+|+++++++ ...|+.+++|.. ...
T Consensus 68 ~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s----------------~~~d~~v~iw~~--~~~ 129 (340)
T 1got_B 68 RLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVAC----------------GGLDNICSIYNL--KTR 129 (340)
T ss_dssp SEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEE----------------EETTCEEEEEET--TTC
T ss_pred CEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEE----------------EeCCCeEEEEEC--ccC
Confidence 34445557788999998887777777889999999999999999987 235677777732 221
Q ss_pred cccceeecCceeeEEeeccccCeeEEEe-cCCEEEEEeCCCcEEEEecCCceeEEEecCCCcee-EEEEecCCCEEE-EE
Q 022324 93 HHRFALEEGRIDIDQWKAHSVGVDQCRM-KRGLILTGVGDKVMRLWSLEGYKCVEEYSLPNAAS-LVDFDFDESKIV-GL 169 (299)
Q Consensus 93 ~~~~~l~~g~~~~~~~~~h~~~i~~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~-~~ 169 (299)
.. .......+.+|.+.|.++.| +++.+++++.|++|++||+.+++++..+..|...+ .++|+|++++++ ++
T Consensus 130 ~~------~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~ 203 (340)
T 1got_B 130 EG------NVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGA 203 (340)
T ss_dssp SB------SCEEEEEEECCSSCEEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred CC------cceeEEEecCCCccEEEEEECCCCcEEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEe
Confidence 11 11224567899999999999 56699999999999999999999999999886555 599999999998 99
Q ss_pred cCCeEEEEecCCce--eeeeccCCccceeeeeccCCCeEEEecCCCcEEEEEcCCcceeeecc--ccCCceeEEEeCCC-
Q 022324 170 IGTRICIWRRNGLR--SVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIR--MHCAPVTSLSLSED- 244 (299)
Q Consensus 170 ~d~~i~v~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~--~~~~~i~~~~~~~~- 244 (299)
.|+.|++||+++.. ..+..+...+. .++++|++..+++|+.|+.|++||+++++.+..+. .+...|.+++|+|+
T Consensus 204 ~d~~v~~wd~~~~~~~~~~~~h~~~v~-~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g 282 (340)
T 1got_B 204 CDASAKLWDVREGMCRQTFTGHESDIN-AICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSG 282 (340)
T ss_dssp TTSCEEEEETTTCSEEEEECCCSSCEE-EEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTS
T ss_pred CCCcEEEEECCCCeeEEEEcCCcCCEE-EEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCC
Confidence 99999999998775 34555655544 56899999999999999999999999888776664 23357999999999
Q ss_pred CeEEEEeCCCcEEEEeCCCCceEEEeeccCCCCcEEEEEccCCCCeEEeeeccc
Q 022324 245 QLIISGSSLGSIAISGLSSDQRVATLRSTDCTGHIICLMYPQFLHMLFFLCFLP 298 (299)
Q Consensus 245 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~s~s~~~ 298 (299)
++|++|+.|+.|++||+.+++.+..+.+|.. +|.+++|+|+|++|++||.-+
T Consensus 283 ~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~--~v~~~~~s~dg~~l~s~s~D~ 334 (340)
T 1got_B 283 RLLLAGYDDFNCNVWDALKADRAGVLAGHDN--RVSCLGVTDDGMAVATGSWDS 334 (340)
T ss_dssp SEEEEEETTSEEEEEETTTCCEEEEEECCSS--CEEEEEECTTSSCEEEEETTS
T ss_pred CEEEEECCCCeEEEEEcccCcEeeEeecCCC--cEEEEEEcCCCCEEEEEcCCc
Confidence 9999999999999999999999999999988 999999999999999998643
No 4
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=5.2e-36 Score=248.16 Aligned_cols=255 Identities=13% Similarity=0.075 Sum_probs=215.7
Q ss_pred CCCCCCCCCcchhccCcHHHHH--HHhhccCccchhhHHHhhhhHHHHhhhhhHHHHHHhhhcCCCCCCCchhhhhhhhh
Q 022324 12 PPKKRSSKPRATIESLNGDIIC--MIFSSLGFFDLVRCSAVCKSWNAIINRCKLLQLLYCKLHGFSNTSGSSMRLHLEEL 89 (299)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~--~i~~~~~h~~~v~~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~d~~~~~~~~~~ 89 (299)
+.....+..+.++++|+.+... ....+.+|...|.++++++++..+++ ...|.++++| ++
T Consensus 48 ~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s----------------~s~D~~i~lW--d~ 109 (321)
T 3ow8_A 48 SETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAAS----------------SSLDAHIRLW--DL 109 (321)
T ss_dssp -CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEE----------------EETTSEEEEE--ET
T ss_pred CCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEE----------------EeCCCcEEEE--EC
Confidence 3445667788999999976543 23356799999999999999988886 3367888888 32
Q ss_pred hhccccceeecCceeeEEeeccccCeeEEEe-cCC-EEEEEeCCCcEEEEecCCceeEEEecCCCcee-EEEEecCCCEE
Q 022324 90 AMKHHRFALEEGRIDIDQWKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNAAS-LVDFDFDESKI 166 (299)
Q Consensus 90 ~~~~~~~~l~~g~~~~~~~~~h~~~i~~~~~-~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~-~~~~~~~~~~l 166 (299)
.. ...+..+..|...+.++.| |++ +|++|+.||.|++||+.+++....+..+...+ .++|+|++++|
T Consensus 110 ~~----------~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l 179 (321)
T 3ow8_A 110 EN----------GKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYL 179 (321)
T ss_dssp TT----------TEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEE
T ss_pred CC----------CCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCCCEE
Confidence 22 2234556789999999999 666 99999999999999999999988888776544 59999999999
Q ss_pred E-EEcCCeEEEEecCCcee--eeeccCCccceeeeeccCCCeEEEecCCCcEEEEEcCCcceeeeccccCCceeEEEeCC
Q 022324 167 V-GLIGTRICIWRRNGLRS--VFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSE 243 (299)
Q Consensus 167 ~-~~~d~~i~v~d~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~ 243 (299)
+ ++.|+.|++||+++++. .+..+...+. .++|+|+++.|++|+.|+.|++||+++++....+.+|...|.+++|+|
T Consensus 180 asg~~dg~i~iwd~~~~~~~~~~~~h~~~v~-~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp 258 (321)
T 3ow8_A 180 ASGAIDGIINIFDIATGKLLHTLEGHAMPIR-SLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCP 258 (321)
T ss_dssp EEEETTSCEEEEETTTTEEEEEECCCSSCCC-EEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEECT
T ss_pred EEEcCCCeEEEEECCCCcEEEEEcccCCcee-EEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEECC
Confidence 9 99999999999998763 3445555444 568999999999999999999999999999999999999999999999
Q ss_pred C-CeEEEEeCCCcEEEEeCCCCceEEEeeccCCCCcEEEEEccCCCCeEEeeecc
Q 022324 244 D-QLIISGSSLGSIAISGLSSDQRVATLRSTDCTGHIICLMYPQFLHMLFFLCFL 297 (299)
Q Consensus 244 ~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~s~s~~ 297 (299)
+ .+|++++.|++|++||+++++++.++..|.. .|.+++|+|+|++|++++.-
T Consensus 259 ~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~--~v~~v~~s~~g~~l~s~~~d 311 (321)
T 3ow8_A 259 DDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQD--QVWGVKYNGNGSKIVSVGDD 311 (321)
T ss_dssp TSSEEEEEETTSCEEEEETTTTEEEEEECCCSS--CEEEEEECTTSSEEEEEETT
T ss_pred CCCEEEEEeCCCcEEEEeCCCCEEEEEEcCCCC--cEEEEEECCCCCEEEEEeCC
Confidence 9 9999999999999999999999999999988 99999999999999999864
No 5
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=1.8e-34 Score=242.17 Aligned_cols=256 Identities=16% Similarity=0.192 Sum_probs=201.8
Q ss_pred hhccCccchhhHHHhhhhHHHHhh-----hhhHHHHHHhhhcCCCCCCCchhhhhhhhhhhccccceeecCcee------
Q 022324 36 FSSLGFFDLVRCSAVCKSWNAIIN-----RCKLLQLLYCKLHGFSNTSGSSMRLHLEELAMKHHRFALEEGRID------ 104 (299)
Q Consensus 36 ~~~~~h~~~v~~~~~~~~~~~l~~-----~~~~w~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~g~~~------ 104 (299)
..+.+|.+.|.|++|+|+++.|++ ++++|+....+..... ... ..++..+.++|++..++.+..+
T Consensus 58 ~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~--~~~--~~~v~~~~~sp~g~~lasg~~d~~i~v~ 133 (354)
T 2pbi_B 58 RTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAV--TMP--CTWVMACAYAPSGCAIACGGLDNKCSVY 133 (354)
T ss_dssp EEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEE--ECS--SSCCCEEEECTTSSEEEEESTTSEEEEE
T ss_pred EEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEE--ecC--CCCEEEEEECCCCCEEEEeeCCCCEEEE
Confidence 356699999999999999999998 4667754221111000 000 1123355667777666655432
Q ss_pred -------------eEEeeccccCeeEEEe-cCC-EEEEEeCCCcEEEEecCCceeEEEecCCCcee-EEEEec--CCCEE
Q 022324 105 -------------IDQWKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNAAS-LVDFDF--DESKI 166 (299)
Q Consensus 105 -------------~~~~~~h~~~i~~~~~-~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~-~~~~~~--~~~~l 166 (299)
...+.+|.+.|.++.| +++ .|++++.|++|++||+++++++..+..|...+ .++++| +++.+
T Consensus 134 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l 213 (354)
T 2pbi_B 134 PLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTF 213 (354)
T ss_dssp ECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEE
T ss_pred EEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEE
Confidence 3455689999999999 555 99999999999999999999999999886555 488877 46788
Q ss_pred E-EEcCCeEEEEecCCce--eeeeccCCccceeeeeccCCCeEEEecCCCcEEEEEcCCcceeeeccc--cCCceeEEEe
Q 022324 167 V-GLIGTRICIWRRNGLR--SVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRM--HCAPVTSLSL 241 (299)
Q Consensus 167 ~-~~~d~~i~v~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~--~~~~i~~~~~ 241 (299)
+ ++.|+.|++||+++++ ..+..|...+. .++++|++..+++++.|+.|++||+++++.+..+.. +...+.+++|
T Consensus 214 ~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~-~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~ 292 (354)
T 2pbi_B 214 VSGGCDKKAMVWDMRSGQCVQAFETHESDVN-SVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDF 292 (354)
T ss_dssp EEEETTSCEEEEETTTCCEEEEECCCSSCEE-EEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEE
T ss_pred EEEeCCCeEEEEECCCCcEEEEecCCCCCeE-EEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEE
Confidence 8 9999999999999875 34455555544 468899999999999999999999998877666643 3346899999
Q ss_pred CCC-CeEEEEeCCCcEEEEeCCCCceEEEeeccCCCCcEEEEEccCCCCeEEeeeccc
Q 022324 242 SED-QLIISGSSLGSIAISGLSSDQRVATLRSTDCTGHIICLMYPQFLHMLFFLCFLP 298 (299)
Q Consensus 242 ~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~s~s~~~ 298 (299)
+|+ .+|++|+.|+.|++||+.+++.+..+.+|.. .|++++|+|+|++|++|+.-+
T Consensus 293 s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~--~v~~l~~spdg~~l~sgs~D~ 348 (354)
T 2pbi_B 293 SLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHEN--RVSTLRVSPDGTAFCSGSWDH 348 (354)
T ss_dssp CTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSS--CEEEEEECTTSSCEEEEETTS
T ss_pred eCCCCEEEEEECCCcEEEEECCCCceEEEEECCCC--cEEEEEECCCCCEEEEEcCCC
Confidence 999 9999999999999999999999999999988 999999999999999998643
No 6
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=1.2e-34 Score=247.80 Aligned_cols=231 Identities=15% Similarity=0.218 Sum_probs=198.8
Q ss_pred hhccCccchhhHHHhhhhHHHHhhhhhHHHHHHhhhcCCCCCCCchhhhhhhhhhhccccceeecCceeeEEeeccccCe
Q 022324 36 FSSLGFFDLVRCSAVCKSWNAIINRCKLLQLLYCKLHGFSNTSGSSMRLHLEELAMKHHRFALEEGRIDIDQWKAHSVGV 115 (299)
Q Consensus 36 ~~~~~h~~~v~~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~h~~~i 115 (299)
..+.+|.+.|++++|+|++..+++ ...|+++++|. +.... ..+++++|.+.|
T Consensus 102 ~~l~gh~~~V~~~~~~p~~~~l~s----------------~s~Dg~i~vwd--~~~~~----------~~~~l~~h~~~V 153 (410)
T 1vyh_C 102 YALSGHRSPVTRVIFHPVFSVMVS----------------ASEDATIKVWD--YETGD----------FERTLKGHTDSV 153 (410)
T ss_dssp CEEECCSSCEEEEEECSSSSEEEE----------------EESSSCEEEEE--TTTCC----------CCEEECCCSSCE
T ss_pred EeecccCCcEEEEEEcCCCCEEEE----------------EeCCCeEEEEE--CCCCc----------EEEEEeccCCcE
Confidence 345589999999999999998887 34678888883 23222 245668999999
Q ss_pred eEEEe-cCC-EEEEEeCCCcEEEEecCCceeEEEecCCCceeE-EEEecCCCEEE-EEcCCeEEEEecCCce--eeeecc
Q 022324 116 DQCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNAASL-VDFDFDESKIV-GLIGTRICIWRRNGLR--SVFPSR 189 (299)
Q Consensus 116 ~~~~~-~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~-~~~d~~i~v~d~~~~~--~~~~~~ 189 (299)
.++.| +++ +|++|+.|++|++||+.+++++..+..|...+. ++|+|++++++ ++.|+.|++||++++. ..+..+
T Consensus 154 ~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h 233 (410)
T 1vyh_C 154 QDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGH 233 (410)
T ss_dssp EEEEECTTSSEEEEEETTSCCCEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECC
T ss_pred EEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCC
Confidence 99999 555 999999999999999999999999998876555 99999999999 9999999999998875 344555
Q ss_pred CCccceeeeeccCCCeEEEecCCCcEEEEEcCCcceeeeccccCCceeEEEeCCC---------------------CeEE
Q 022324 190 EGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED---------------------QLII 248 (299)
Q Consensus 190 ~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~---------------------~~l~ 248 (299)
...+. .+++++++..+++|+.|+.|++||+++++....+..|...|.+++|+|+ .+|+
T Consensus 234 ~~~v~-~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~ 312 (410)
T 1vyh_C 234 REWVR-MVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLL 312 (410)
T ss_dssp SSCEE-EEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEE
T ss_pred CccEE-EEEECCCCCEEEEEcCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEE
Confidence 55443 4578888899999999999999999999999999999999999999984 4799
Q ss_pred EEeCCCcEEEEeCCCCceEEEeeccCCCCcEEEEEccCCCCeEEeeecc
Q 022324 249 SGSSLGSIAISGLSSDQRVATLRSTDCTGHIICLMYPQFLHMLFFLCFL 297 (299)
Q Consensus 249 ~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~s~s~~ 297 (299)
+|+.|+.|++||+++++++.++.+|.. .|++++|+|+|++|++|+.-
T Consensus 313 sgs~D~~i~iwd~~~~~~~~~~~~h~~--~v~~v~~~~~g~~l~s~s~D 359 (410)
T 1vyh_C 313 SGSRDKTIKMWDVSTGMCLMTLVGHDN--WVRGVLFHSGGKFILSCADD 359 (410)
T ss_dssp EEETTSEEEEEETTTTEEEEEEECCSS--CEEEEEECSSSSCEEEEETT
T ss_pred EEeCCCeEEEEECCCCceEEEEECCCC--cEEEEEEcCCCCEEEEEeCC
Confidence 999999999999999999999999988 89999999999999999854
No 7
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=3.7e-34 Score=236.99 Aligned_cols=231 Identities=16% Similarity=0.187 Sum_probs=193.8
Q ss_pred hccCccchhhHHHhhhhH----HHHhhhhhHHHHHHhhhcCCCCCCCchhhhhhhhhhhccccceeecCce-eeEEeecc
Q 022324 37 SSLGFFDLVRCSAVCKSW----NAIINRCKLLQLLYCKLHGFSNTSGSSMRLHLEELAMKHHRFALEEGRI-DIDQWKAH 111 (299)
Q Consensus 37 ~~~~h~~~v~~~~~~~~~----~~l~~~~~~w~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~g~~-~~~~~~~h 111 (299)
...+|.+.|.+++|+++. ..+++ ...|+++|+|.. . .+.. ....+.+|
T Consensus 27 ~~~~H~~~V~~v~~~~~~~~~~~~l~t----------------gs~D~~v~vW~~--~---------~~~~~~~~~l~gh 79 (321)
T 3ow8_A 27 QEQAHDDAIWSVAWGTNKKENSETVVT----------------GSLDDLVKVWKW--R---------DERLDLQWSLEGH 79 (321)
T ss_dssp ETTSSSSCEEEEEEC-------CEEEE----------------EETTSCEEEEEE--E---------TTEEEEEEEECCC
T ss_pred ecccCCCcEEEEEEecCCCCCCCEEEE----------------EcCCCCEEEEEC--C---------CCCeeeeeeeccC
Confidence 345899999999999864 45665 337888899933 1 1111 23457899
Q ss_pred ccCeeEEEe-cCC-EEEEEeCCCcEEEEecCCceeEEEecCCCce-eEEEEecCCCEEE-EEcCCeEEEEecCCceee--
Q 022324 112 SVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNAA-SLVDFDFDESKIV-GLIGTRICIWRRNGLRSV-- 185 (299)
Q Consensus 112 ~~~i~~~~~-~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~-~~~d~~i~v~d~~~~~~~-- 185 (299)
...|.++.+ +++ ++++++.|++|++||+.+++.+..+..+... ..++|+|++++++ ++.++.|++||+++....
T Consensus 80 ~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~ 159 (321)
T 3ow8_A 80 QLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYS 159 (321)
T ss_dssp SSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEE
T ss_pred CCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEE
Confidence 999999999 555 9999999999999999999999988876544 4599999999999 999999999999887543
Q ss_pred eeccCCccceeeeeccCCCeEEEecCCCcEEEEEcCCcceeeeccccCCceeEEEeCCC-CeEEEEeCCCcEEEEeCCCC
Q 022324 186 FPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGSSLGSIAISGLSSD 264 (299)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~-~~l~~~~~dg~i~iwd~~~~ 264 (299)
+..+... ...++++|++.++++|+.|+.|++||+++++.+..+..|..+|.+++|+|+ ++|++|+.|+.|++||++++
T Consensus 160 ~~~~~~~-v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~ 238 (321)
T 3ow8_A 160 LDTRGKF-ILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHA 238 (321)
T ss_dssp EECSSSC-EEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTC
T ss_pred ecCCCce-EEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCc
Confidence 3333333 335689999999999999999999999999999999999999999999999 99999999999999999999
Q ss_pred ceEEEeeccCCCCcEEEEEccCCCCeEEeeecc
Q 022324 265 QRVATLRSTDCTGHIICLMYPQFLHMLFFLCFL 297 (299)
Q Consensus 265 ~~~~~~~~~~~~~~i~~~~~s~~g~~l~s~s~~ 297 (299)
+++.++.+|.. .|.+++|+|++++|++|+.-
T Consensus 239 ~~~~~~~~h~~--~v~~~~~sp~~~~l~s~s~D 269 (321)
T 3ow8_A 239 NLAGTLSGHAS--WVLNVAFCPDDTHFVSSSSD 269 (321)
T ss_dssp CEEEEECCCSS--CEEEEEECTTSSEEEEEETT
T ss_pred ceeEEEcCCCC--ceEEEEECCCCCEEEEEeCC
Confidence 99999999988 89999999999999999864
No 8
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=1.6e-34 Score=237.46 Aligned_cols=231 Identities=13% Similarity=0.128 Sum_probs=193.1
Q ss_pred hccCccchhhHHHhhhhHHHHhhhhhHHHHHHhhhcCCCCCCCchhhhhhhhhhhccccceeecCceeeEEeeccccCee
Q 022324 37 SSLGFFDLVRCSAVCKSWNAIINRCKLLQLLYCKLHGFSNTSGSSMRLHLEELAMKHHRFALEEGRIDIDQWKAHSVGVD 116 (299)
Q Consensus 37 ~~~~h~~~v~~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~h~~~i~ 116 (299)
.+.+|.+.|.+++|+|+++++++ ...|+.+++|.. .. ...++.+.+|..+|.
T Consensus 8 ~~~~h~~~V~~~~fsp~~~~l~s----------------~~~dg~v~lWd~--~~----------~~~~~~~~~~~~~v~ 59 (304)
T 2ynn_A 8 TFSNRSDRVKGIDFHPTEPWVLT----------------TLYSGRVELWNY--ET----------QVEVRSIQVTETPVR 59 (304)
T ss_dssp EEEEECSCEEEEEECSSSSEEEE----------------EETTSEEEEEET--TT----------TEEEEEEECCSSCEE
T ss_pred eecCCCCceEEEEECCCCCEEEE----------------EcCCCcEEEEEC--CC----------CceeEEeeccCCcEE
Confidence 45689999999999999999987 336788888832 22 223556789999999
Q ss_pred EEEe-cCC-EEEEEeCCCcEEEEecCCceeEEEecCCCceeE-EEEecCCCEEE-EEcCCeEEEEecCCce---eeeecc
Q 022324 117 QCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNAASL-VDFDFDESKIV-GLIGTRICIWRRNGLR---SVFPSR 189 (299)
Q Consensus 117 ~~~~-~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~-~~~d~~i~v~d~~~~~---~~~~~~ 189 (299)
++.| +++ +|++|+.|++|++||+.+++++..+..|...+. ++|+|++++++ ++.|++|++||+++.. ..+..|
T Consensus 60 ~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h 139 (304)
T 2ynn_A 60 AGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGH 139 (304)
T ss_dssp EEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCC
T ss_pred EEEEeCCCCEEEEECCCCEEEEEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhccc
Confidence 9999 555 999999999999999999999999998876554 99999999999 9999999999998763 334455
Q ss_pred CCccceeeeeccC-CCeEEEecCCCcEEEEEcCCcceeeecc-ccCCceeEEEeCC--C-CeEEEEeCCCcEEEEeCCCC
Q 022324 190 EGTFMKGLCMRYF-DPEAVVGCEDGTARVFDMYSRKCSQIIR-MHCAPVTSLSLSE--D-QLIISGSSLGSIAISGLSSD 264 (299)
Q Consensus 190 ~~~~~~~~~~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~-~~~~~i~~~~~~~--~-~~l~~~~~dg~i~iwd~~~~ 264 (299)
...+. .++++|. +..+++|+.|+.|++||++++.....+. .|...+..+.++| + .+|++|+.|++|++||++++
T Consensus 140 ~~~v~-~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~ 218 (304)
T 2ynn_A 140 EHFVM-CVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTK 218 (304)
T ss_dssp CSCEE-EEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTT
T ss_pred CCcEE-EEEECCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCC
Confidence 55443 4577774 5679999999999999998877665554 5567899999986 5 79999999999999999999
Q ss_pred ceEEEeeccCCCCcEEEEEccCCCCeEEeeeccc
Q 022324 265 QRVATLRSTDCTGHIICLMYPQFLHMLFFLCFLP 298 (299)
Q Consensus 265 ~~~~~~~~~~~~~~i~~~~~s~~g~~l~s~s~~~ 298 (299)
+++.++.+|.. .|.+++|+|++++|++|+.-+
T Consensus 219 ~~~~~~~~h~~--~v~~~~~~p~~~~l~s~s~Dg 250 (304)
T 2ynn_A 219 SCVATLEGHMS--NVSFAVFHPTLPIIISGSEDG 250 (304)
T ss_dssp EEEEEEECCSS--CEEEEEECSSSSEEEEEETTS
T ss_pred ccceeeCCCCC--CEEEEEECCCCCEEEEEcCCC
Confidence 99999999988 999999999999999998643
No 9
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=5.2e-34 Score=238.12 Aligned_cols=230 Identities=17% Similarity=0.135 Sum_probs=179.5
Q ss_pred CccchhhHHHhhhhHHHHhhhhhHHHHHHhhhcCCCCCCCchhhhhhhhhhhccccceeecCceeeEEeeccccCeeEEE
Q 022324 40 GFFDLVRCSAVCKSWNAIINRCKLLQLLYCKLHGFSNTSGSSMRLHLEELAMKHHRFALEEGRIDIDQWKAHSVGVDQCR 119 (299)
Q Consensus 40 ~h~~~v~~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~h~~~i~~~~ 119 (299)
.|.+.|.+++|+++...+ + ...|+++++| ++........+ ...+.+|.+.|++++
T Consensus 80 ~~~~~v~~~~~s~d~~l~-~----------------~s~dg~v~lW--d~~~~~~~~~~------~~~~~~H~~~V~~v~ 134 (344)
T 4gqb_B 80 QTEAGVADLTWVGERGIL-V----------------ASDSGAVELW--ELDENETLIVS------KFCKYEHDDIVSTVS 134 (344)
T ss_dssp EESSCEEEEEEETTTEEE-E----------------EETTSEEEEE--EECTTSSCEEE------EEEEECCSSCEEEEE
T ss_pred ccCCCEEEEEEeCCCeEE-E----------------EECCCEEEEE--eccCCCceeEe------eccccCCCCCEEEEE
Confidence 466779999999986544 3 2367888888 33322211111 223468999999999
Q ss_pred e-cCC-EEEEEeCCCcEEEEecCCceeEEEecCCCceeE-EEEecCCC-EEE-EEcCCeEEEEecCCceeeeec---cCC
Q 022324 120 M-KRG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNAASL-VDFDFDES-KIV-GLIGTRICIWRRNGLRSVFPS---REG 191 (299)
Q Consensus 120 ~-~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~~~~-~l~-~~~d~~i~v~d~~~~~~~~~~---~~~ 191 (299)
| +++ +|++|+.|++|++||+.+++++..+.+|...+. ++|++++. +++ ++.|+.|++||+++++..... ..+
T Consensus 135 ~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~ 214 (344)
T 4gqb_B 135 VLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPG 214 (344)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----C
T ss_pred ECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceee
Confidence 9 666 999999999999999999999999998876554 99999885 566 899999999999987533221 222
Q ss_pred ccceeeeeccCCC-eEEEecCCCcEEEEEcCCcceeeeccccCCceeEEEeCCC--CeEEEEeCCCcEEEEeCCCCceEE
Q 022324 192 TFMKGLCMRYFDP-EAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED--QLIISGSSLGSIAISGLSSDQRVA 268 (299)
Q Consensus 192 ~~~~~~~~~~~~~-~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~--~~l~~~~~dg~i~iwd~~~~~~~~ 268 (299)
.....+++++.+. .+++|+.|+.|++||+++++.+..+.+|...|++++|+|+ ++|++|+.|++|+|||+++++++
T Consensus 215 ~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~- 293 (344)
T 4gqb_B 215 YLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELF- 293 (344)
T ss_dssp CCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEE-
T ss_pred ccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEE-
Confidence 2233567777654 5789999999999999999999999999999999999997 58999999999999999988765
Q ss_pred EeeccCCCCcEEEEEccCCCCe-EEeeecc
Q 022324 269 TLRSTDCTGHIICLMYPQFLHM-LFFLCFL 297 (299)
Q Consensus 269 ~~~~~~~~~~i~~~~~s~~g~~-l~s~s~~ 297 (299)
.+.+|.. .|++++|+|+++. |++||.-
T Consensus 294 ~~~~H~~--~V~~v~~sp~~~~llas~s~D 321 (344)
T 4gqb_B 294 RSQAHRD--FVRDATWSPLNHSLLTTVGWD 321 (344)
T ss_dssp EECCCSS--CEEEEEECSSSTTEEEEEETT
T ss_pred EEcCCCC--CEEEEEEeCCCCeEEEEEcCC
Confidence 5678887 8999999999875 5677753
No 10
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=1.3e-33 Score=233.56 Aligned_cols=233 Identities=18% Similarity=0.235 Sum_probs=192.3
Q ss_pred hccCccchhhHHHhhhhH-HHHhhhhhHHHHHHhhhcCCCCCCCchhhhhhhhhhhccccceeecCceeeEEeeccccCe
Q 022324 37 SSLGFFDLVRCSAVCKSW-NAIINRCKLLQLLYCKLHGFSNTSGSSMRLHLEELAMKHHRFALEEGRIDIDQWKAHSVGV 115 (299)
Q Consensus 37 ~~~~h~~~v~~~~~~~~~-~~l~~~~~~w~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~h~~~i 115 (299)
.+.+|.+.|.+++++++. +++++ ...|+++++|.. ..... .-...++.+++|...|
T Consensus 12 ~l~gH~~~V~~l~~~~~~~~~l~s----------------~s~D~~v~~W~~--~~~~~-----~~~~~~~~~~~h~~~v 68 (319)
T 3frx_A 12 TLEGHNGWVTSLATSAGQPNLLLS----------------ASRDKTLISWKL--TGDDQ-----KFGVPVRSFKGHSHIV 68 (319)
T ss_dssp EECCCSSCEEEEEECSSCTTEEEE----------------EETTSEEEEEEE--EEETT-----EEEEEEEEEECCSSCE
T ss_pred EEccccceEEEEEccCCCccEEEE----------------ecCCccEEEecC--CCCCc-----cccccceEEeCCcccE
Confidence 466999999999999865 67776 337788888832 21110 0123467789999999
Q ss_pred eEEEe-cCC-EEEEEeCCCcEEEEecCCceeEEEecCCCceeE-EEEecCCCEEE-EEcCCeEEEEecCCce-eeeeccC
Q 022324 116 DQCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNAASL-VDFDFDESKIV-GLIGTRICIWRRNGLR-SVFPSRE 190 (299)
Q Consensus 116 ~~~~~-~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~-~~~d~~i~v~d~~~~~-~~~~~~~ 190 (299)
.++.| +++ +|++|+.|++|++||+.+++++..+..|...+. ++|+|++.+++ ++.|+.|++||++... ..+..+.
T Consensus 69 ~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~~~~~~~~h~ 148 (319)
T 3frx_A 69 QDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQCLATLLGHN 148 (319)
T ss_dssp EEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTSCEEEEECCCS
T ss_pred EEEEECCCCCEEEEEeCCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeccC
Confidence 99999 566 999999999999999999999999998876554 99999999999 9999999999998654 3344454
Q ss_pred CccceeeeeccCC------CeEEEecCCCcEEEEEcCCcceeeeccccCCceeEEEeCCC-CeEEEEeCCCcEEEEeCCC
Q 022324 191 GTFMKGLCMRYFD------PEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGSSLGSIAISGLSS 263 (299)
Q Consensus 191 ~~~~~~~~~~~~~------~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~-~~l~~~~~dg~i~iwd~~~ 263 (299)
..+. .+++.+.. ..+++++.|+.|++||+++++....+.+|...|.+++|+|+ ++|++|+.||.|++||+++
T Consensus 149 ~~v~-~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~ 227 (319)
T 3frx_A 149 DWVS-QVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAA 227 (319)
T ss_dssp SCEE-EEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTT
T ss_pred CcEE-EEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC
Confidence 4433 34666643 36999999999999999999988889899999999999999 9999999999999999999
Q ss_pred CceEEEeeccCCCCcEEEEEccCCCCeEEeeec
Q 022324 264 DQRVATLRSTDCTGHIICLMYPQFLHMLFFLCF 296 (299)
Q Consensus 264 ~~~~~~~~~~~~~~~i~~~~~s~~g~~l~s~s~ 296 (299)
++++.++..+. +|.+++|+|++.+|++++.
T Consensus 228 ~~~~~~~~~~~---~v~~~~~sp~~~~la~~~~ 257 (319)
T 3frx_A 228 KKAMYTLSAQD---EVFSLAFSPNRYWLAAATA 257 (319)
T ss_dssp TEEEEEEECCS---CEEEEEECSSSSEEEEEET
T ss_pred CcEEEEecCCC---cEEEEEEcCCCCEEEEEcC
Confidence 99999987654 7999999999999998864
No 11
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=1.2e-34 Score=245.55 Aligned_cols=264 Identities=17% Similarity=0.157 Sum_probs=210.7
Q ss_pred CCCCCCCCCCcchhccCcHHHHHHHhhccCccchhhHHHhhhhHHHHhhhhhHHHHHHhhhcCCCCCCCchhhhhhhhhh
Q 022324 11 PPPKKRSSKPRATIESLNGDIICMIFSSLGFFDLVRCSAVCKSWNAIINRCKLLQLLYCKLHGFSNTSGSSMRLHLEELA 90 (299)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~h~~~v~~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~d~~~~~~~~~~~ 90 (299)
+.+....+..+.++++|+......+..+..|...|.+++|+|+++++++ ...|..+++|. +.
T Consensus 77 ~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las----------------~~~d~~v~iw~--~~ 138 (380)
T 3iz6_a 77 EKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVAC----------------GGLDSACSIFN--LS 138 (380)
T ss_dssp TSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEE----------------CCSSSCCEEEE--CC
T ss_pred CCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEE----------------eeCCCcEEEEE--CC
Confidence 3445566677889999999888888888899999999999999999997 44677778883 22
Q ss_pred hccccceeecCceeeEEeeccccCeeEEEe-cC-C-EEEEEeCCCcEEEEecCCceeEEEe-----cCCCc-eeEEEEec
Q 022324 91 MKHHRFALEEGRIDIDQWKAHSVGVDQCRM-KR-G-LILTGVGDKVMRLWSLEGYKCVEEY-----SLPNA-ASLVDFDF 161 (299)
Q Consensus 91 ~~~~~~~l~~g~~~~~~~~~h~~~i~~~~~-~~-~-~l~s~~~dg~i~iwd~~~~~~~~~~-----~~~~~-~~~~~~~~ 161 (299)
..... .......+.+.+|.+.|.++.| ++ + .|++|+.|++|++||+.+++.+..+ ..|.. +..+++++
T Consensus 139 ~~~~~---~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 215 (380)
T 3iz6_a 139 SQADR---DGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINS 215 (380)
T ss_dssp CCSSC---CCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECS
T ss_pred CCccc---cCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeec
Confidence 21110 0001113456899999999988 43 3 8999999999999999999988877 34544 44588876
Q ss_pred -CCCEEE-EEcCCeEEEEecCCce---eeeeccCCccceeeeeccCCCeEEEecCCCcEEEEEcCCcceeeeccccC---
Q 022324 162 -DESKIV-GLIGTRICIWRRNGLR---SVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHC--- 233 (299)
Q Consensus 162 -~~~~l~-~~~d~~i~v~d~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~--- 233 (299)
++++++ ++.|+.|++||++... ..+..|.+.+. .++|+|++..+++|+.|+.|++||+++++.+..+..+.
T Consensus 216 ~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~-~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~ 294 (380)
T 3iz6_a 216 LNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDIN-SVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRN 294 (380)
T ss_dssp SSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCC-EEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSS
T ss_pred CCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeE-EEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEeccccccc
Confidence 778888 9999999999997432 44566666655 46899999999999999999999999998887765332
Q ss_pred ----CceeEEEeCCC-CeEEEEeCCCcEEEEeCCCCceEEEe----eccCCCCcEEEEEccCCCCeEEeeeccc
Q 022324 234 ----APVTSLSLSED-QLIISGSSLGSIAISGLSSDQRVATL----RSTDCTGHIICLMYPQFLHMLFFLCFLP 298 (299)
Q Consensus 234 ----~~i~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~----~~~~~~~~i~~~~~s~~g~~l~s~s~~~ 298 (299)
..|++++|+|+ ++|++|+.||.|++||+.+++.+..+ .+|.. .|++++|+|+|++|++||.-+
T Consensus 295 ~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~--~v~~l~~s~dg~~l~sgs~D~ 366 (380)
T 3iz6_a 295 DNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEG--RISCLGLSSDGSALCTGSWDK 366 (380)
T ss_dssp CCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCC--CCCEEEECSSSSEEEEECTTS
T ss_pred ccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCC--ceEEEEECCCCCEEEEeeCCC
Confidence 34899999999 99999999999999999999988877 56666 899999999999999998643
No 12
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=5.3e-32 Score=234.98 Aligned_cols=274 Identities=22% Similarity=0.261 Sum_probs=214.9
Q ss_pred CcchhccCcHHHHHHHhhccCccchhhHHHhhhhHHHHhhh-hhHHHHHHhhhc-CCCC----------------CCCch
Q 022324 20 PRATIESLNGDIICMIFSSLGFFDLVRCSAVCKSWNAIINR-CKLLQLLYCKLH-GFSN----------------TSGSS 81 (299)
Q Consensus 20 ~~~~~~~~~~~~~~~i~~~~~h~~~v~~~~~~~~~~~l~~~-~~~w~~~~~~~~-~~~~----------------~~d~~ 81 (299)
..+.+..||.|+..+|+++|++.++++|..+|+.|+.++.+ ..+|+.++.+.. .... .....
T Consensus 11 ~~d~~~~lp~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (464)
T 3v7d_B 11 KRDLITSLPFEISLKIFNYLQFEDIINSLGVSQNWNKIIRKSTSLWKKLLISENFVSPKGFNSLNLKLSQKYPKLSQQDR 90 (464)
T ss_dssp CCCHHHHSCHHHHHHHHTTSCHHHHHHHHTTCHHHHHHHTTCHHHHHHHHHHTTSCCTTTHHHHHHHHHHHCTTSCHHHH
T ss_pred ccCChHHCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHcCCHHHHHHHHhccccccccchhhhhhhhhccCCCcccchh
Confidence 34678899999999999999999999999999999999987 899999885443 1100 00111
Q ss_pred hhh-----------hhhhh-----------------hhccccceeecCce-------------eeEEeeccccCeeEEEe
Q 022324 82 MRL-----------HLEEL-----------------AMKHHRFALEEGRI-------------DIDQWKAHSVGVDQCRM 120 (299)
Q Consensus 82 ~~~-----------~~~~~-----------------~~~~~~~~l~~g~~-------------~~~~~~~h~~~i~~~~~ 120 (299)
++. |...- ....++..++.|.. .+..+.+|.+.|.++.|
T Consensus 91 ~~~~~~~~~~~~~~w~~~~~~~~~~~l~~h~~~v~~~~~~~~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~ 170 (464)
T 3v7d_B 91 LRLSFLENIFILKNWYNPKFVPQRTTLRGHMTSVITCLQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKY 170 (464)
T ss_dssp HHHHHHHHHHHHHHHHCTTCCCEEEEEECCSSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEE
T ss_pred hHHHHHHhhhhHhhhcCCCcCcceEEEcCCCCCcEEEEEECCCEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEE
Confidence 111 10000 00111122232222 14566799999999999
Q ss_pred -cCCEEEEEeCCCcEEEEecCCceeEEEecCCCceeE-EEEe--cCCCEEE-EEcCCeEEEEecCCceee----------
Q 022324 121 -KRGLILTGVGDKVMRLWSLEGYKCVEEYSLPNAASL-VDFD--FDESKIV-GLIGTRICIWRRNGLRSV---------- 185 (299)
Q Consensus 121 -~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~-~~~~--~~~~~l~-~~~d~~i~v~d~~~~~~~---------- 185 (299)
++++|++|+.||+|++||+.+++++..+..|...+. ++|+ +++..++ ++.|+.|++||+++....
T Consensus 171 ~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~ 250 (464)
T 3v7d_B 171 AHGGILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYP 250 (464)
T ss_dssp CSTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSS
T ss_pred cCCCEEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcc
Confidence 455999999999999999999999999997765554 8887 5667788 999999999999875421
Q ss_pred ------------eeccCCccceeeeeccCCCeEEEecCCCcEEEEEcCCcceeeeccccCCceeEEEeCCC-CeEEEEeC
Q 022324 186 ------------FPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGSS 252 (299)
Q Consensus 186 ------------~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~-~~l~~~~~ 252 (299)
.....++...+.++.+++..+++++.|+.|++||+++++.+..+..|...|.+++|+|+ +++++|+.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~ 330 (464)
T 3v7d_B 251 LVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASM 330 (464)
T ss_dssp EEESCGGGCTTEEEEECCCSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEET
T ss_pred eEeeccCCCeEEEEEccCccceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeC
Confidence 12223344446678888999999999999999999999999999999999999999999 99999999
Q ss_pred CCcEEEEeCCCCceEEEeeccCCCCcEEEEEccCCCCeEEeeecc
Q 022324 253 LGSIAISGLSSDQRVATLRSTDCTGHIICLMYPQFLHMLFFLCFL 297 (299)
Q Consensus 253 dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~s~s~~ 297 (299)
||.|++||+++++++.++..|.. .|.+++|+ +.+|++|+.-
T Consensus 331 dg~i~vwd~~~~~~~~~~~~h~~--~v~~~~~~--~~~l~s~s~d 371 (464)
T 3v7d_B 331 DTTIRIWDLENGELMYTLQGHTA--LVGLLRLS--DKFLVSAAAD 371 (464)
T ss_dssp TSCEEEEETTTTEEEEEECCCSS--CEEEEEEC--SSEEEEEETT
T ss_pred CCcEEEEECCCCcEEEEEeCCCC--cEEEEEEc--CCEEEEEeCC
Confidence 99999999999999999999988 89999997 5789998754
No 13
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=9.1e-34 Score=238.08 Aligned_cols=247 Identities=13% Similarity=0.080 Sum_probs=189.1
Q ss_pred chhccCcHHHHHHHhh----ccCccchhhHHHhhhhHHHHhhhhhHHHHHHhhhcCCCCCCCchhhhhhhhhhhccccce
Q 022324 22 ATIESLNGDIICMIFS----SLGFFDLVRCSAVCKSWNAIINRCKLLQLLYCKLHGFSNTSGSSMRLHLEELAMKHHRFA 97 (299)
Q Consensus 22 ~~~~~~~~~~~~~i~~----~~~h~~~v~~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 97 (299)
..+..|+......... ..+|.+.|.+++|+|++.+++. ..|+++++| ++........
T Consensus 70 ~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~~l~~-----------------s~dg~v~lW--d~~~~~~~~~ 130 (357)
T 4g56_B 70 GSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKGILVA-----------------SDSGAVELW--EILEKESLLV 130 (357)
T ss_dssp EEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTEEEEE-----------------ETTSCEEEC----------CC
T ss_pred CeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCCEEEE-----------------ECCCEEEEe--eccccceeEE
Confidence 3455666555543333 3468899999999999877664 256777888 3332221111
Q ss_pred eecCceeeEEeeccccCeeEEEe-cCC-EEEEEeCCCcEEEEecCCceeEEEecCCCceeE-EEEecCCC-EEE-EEcCC
Q 022324 98 LEEGRIDIDQWKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNAASL-VDFDFDES-KIV-GLIGT 172 (299)
Q Consensus 98 l~~g~~~~~~~~~h~~~i~~~~~-~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~~~~-~l~-~~~d~ 172 (299)
. .....+|.+.|++++| +++ +|++|+.|++|++||+.+++++..+..|...+. ++|++++. .++ ++.|+
T Consensus 131 ~------~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg 204 (357)
T 4g56_B 131 N------KFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDG 204 (357)
T ss_dssp C------CEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTS
T ss_pred E------eeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCC
Confidence 0 1223589999999999 666 999999999999999999999999998876555 99999875 566 89999
Q ss_pred eEEEEecCCceeeee----ccCCccceeeeeccCCC-eEEEecCCCcEEEEEcCCcceeeeccccCCceeEEEeCCC--C
Q 022324 173 RICIWRRNGLRSVFP----SREGTFMKGLCMRYFDP-EAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED--Q 245 (299)
Q Consensus 173 ~i~v~d~~~~~~~~~----~~~~~~~~~~~~~~~~~-~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~--~ 245 (299)
.|++||+++++.... .+... ...++++|++. .+++|+.|+.|++||+++++.+..+..|...|++++|+|+ +
T Consensus 205 ~v~~wd~~~~~~~~~~~~~~~~~~-v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~ 283 (357)
T 4g56_B 205 RILLWDTRKPKPATRIDFCASDTI-PTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSP 283 (357)
T ss_dssp CEEECCTTSSSCBCBCCCTTCCSC-EEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSC
T ss_pred ceEEEECCCCceeeeeeecccccc-ccchhhhhcccceEEEeecccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCC
Confidence 999999988753321 12222 23457887755 5888999999999999999999999999999999999987 6
Q ss_pred eEEEEeCCCcEEEEeCCCCceEEEeeccCCCCcEEEEEccC-CCCeEEeeecc
Q 022324 246 LIISGSSLGSIAISGLSSDQRVATLRSTDCTGHIICLMYPQ-FLHMLFFLCFL 297 (299)
Q Consensus 246 ~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~-~g~~l~s~s~~ 297 (299)
+|++|+.|++|+|||+++++++..+ +|.. .|++++|+| ++++|++||.-
T Consensus 284 ~lasgs~D~~i~iwd~~~~~~~~~~-~H~~--~V~~vafsP~d~~~l~s~s~D 333 (357)
T 4g56_B 284 FLASISEDCTVAVLDADFSEVFRDL-SHRD--FVTGVAWSPLDHSKFTTVGWD 333 (357)
T ss_dssp CEEEEETTSCEEEECTTSCEEEEEC-CCSS--CEEEEEECSSSTTEEEEEETT
T ss_pred EEEEEeCCCEEEEEECCCCcEeEEC-CCCC--CEEEEEEeCCCCCEEEEEcCC
Confidence 8999999999999999999887765 6776 899999998 79999999864
No 14
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=1.5e-32 Score=229.16 Aligned_cols=233 Identities=14% Similarity=0.163 Sum_probs=192.8
Q ss_pred hhccCccchhhHHHhhhhHHHHhhhhhHHHHHHhhhcCCCCCCCchhhhhhhhhhhccccceeecCceeeEEeeccccCe
Q 022324 36 FSSLGFFDLVRCSAVCKSWNAIINRCKLLQLLYCKLHGFSNTSGSSMRLHLEELAMKHHRFALEEGRIDIDQWKAHSVGV 115 (299)
Q Consensus 36 ~~~~~h~~~v~~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~h~~~i 115 (299)
..+.+|.+.|.+++|+|+++++++ ...|+.+++|.. .. ...+..+..|...|
T Consensus 49 ~~l~gH~~~v~~~~~s~d~~~l~s----------------~s~Dg~v~iWd~--~~----------~~~~~~~~~~~~~v 100 (340)
T 1got_B 49 RTLRGHLAKIYAMHWGTDSRLLLS----------------ASQDGKLIIWDS--YT----------TNKVHAIPLRSSWV 100 (340)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEE----------------EETTTEEEEEET--TT----------CCEEEEEECSSSCE
T ss_pred eeecCCCCceEEEEECCCCCEEEE----------------EeCCCcEEEEEC--CC----------CCcceEeecCCccE
Confidence 456789999999999999999987 346788888832 21 12345568899999
Q ss_pred eEEEe-cCC-EEEEEeCCCcEEEEecCCc----eeEEEecCCCceeE-EEEecCCCEEEEEcCCeEEEEecCCce--eee
Q 022324 116 DQCRM-KRG-LILTGVGDKVMRLWSLEGY----KCVEEYSLPNAASL-VDFDFDESKIVGLIGTRICIWRRNGLR--SVF 186 (299)
Q Consensus 116 ~~~~~-~~~-~l~s~~~dg~i~iwd~~~~----~~~~~~~~~~~~~~-~~~~~~~~~l~~~~d~~i~v~d~~~~~--~~~ 186 (299)
.++.| +++ +|++|+.|+.+++|++.+. +....+..|...+. +.|++++.++.++.|+.|++||++++. ..+
T Consensus 101 ~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~ 180 (340)
T 1got_B 101 MTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTF 180 (340)
T ss_dssp EEEEECTTSSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred EEEEECCCCCEEEEEeCCCeEEEEECccCCCcceeEEEecCCCccEEEEEECCCCcEEEEECCCcEEEEECCCCcEEEEE
Confidence 99999 666 9999999999999999865 35566777766555 889988875559999999999999875 344
Q ss_pred eccCCccceeeeeccCCCeEEEecCCCcEEEEEcCCcceeeeccccCCceeEEEeCCC-CeEEEEeCCCcEEEEeCCCCc
Q 022324 187 PSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGSSLGSIAISGLSSDQ 265 (299)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~ 265 (299)
..|.+.+. .+++++++..+++|+.|+.|++||+++++.+..+..|...|.+++|+|+ ++|++|+.||+|++||+++++
T Consensus 181 ~~h~~~v~-~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~ 259 (340)
T 1got_B 181 TGHTGDVM-SLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQ 259 (340)
T ss_dssp CCCSSCEE-EEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE
T ss_pred cCCCCceE-EEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCc
Confidence 55555544 5688999999999999999999999999999999999999999999999 999999999999999999998
Q ss_pred eEEEeeccCCCCcEEEEEccCCCCeEEeeecc
Q 022324 266 RVATLRSTDCTGHIICLMYPQFLHMLFFLCFL 297 (299)
Q Consensus 266 ~~~~~~~~~~~~~i~~~~~s~~g~~l~s~s~~ 297 (299)
.+..+..+.....|.+++|+|+|++|++|+..
T Consensus 260 ~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d 291 (340)
T 1got_B 260 ELMTYSHDNIICGITSVSFSKSGRLLLAGYDD 291 (340)
T ss_dssp EEEEECCTTCCSCEEEEEECTTSSEEEEEETT
T ss_pred EEEEEccCCcccceEEEEECCCCCEEEEECCC
Confidence 88777644322379999999999999999853
No 15
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=9.6e-33 Score=226.10 Aligned_cols=232 Identities=10% Similarity=0.040 Sum_probs=181.7
Q ss_pred hccCccchhhHHHhhhhHHHHhhhhhHHHHHHhhhcCCCCCCCchhhhhhhhhhhccccceeecCceeeEEeeccccCee
Q 022324 37 SSLGFFDLVRCSAVCKSWNAIINRCKLLQLLYCKLHGFSNTSGSSMRLHLEELAMKHHRFALEEGRIDIDQWKAHSVGVD 116 (299)
Q Consensus 37 ~~~~h~~~v~~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~h~~~i~ 116 (299)
.+.+|.+.|++++|++++++|++ ...|+++++|.. ... ....+.++.+|.++|+
T Consensus 4 ~~~~h~~~V~~~~~s~~g~~las----------------~s~D~~v~iw~~--~~~--------~~~~~~~l~gH~~~V~ 57 (297)
T 2pm7_B 4 IANAHNEMIHDAVMDYYGKRMAT----------------CSSDKTIKIFEV--EGE--------THKLIDTLTGHEGPVW 57 (297)
T ss_dssp ECCSCSSCEEEEEECTTSSEEEE----------------EETTSCEEEEEB--CSS--------CBCCCEEECCCSSCEE
T ss_pred eccCCcCceEEEEECCCCCEEEE----------------EeCCCEEEEEec--CCC--------CcEEEEEEccccCCeE
Confidence 45689999999999999999997 336788888832 110 1123567799999999
Q ss_pred EEEe-cC--C-EEEEEeCCCcEEEEecCCce--eEEEecCCCce-eEEEEecC--CCEEE-EEcCCeEEEEecCCce---
Q 022324 117 QCRM-KR--G-LILTGVGDKVMRLWSLEGYK--CVEEYSLPNAA-SLVDFDFD--ESKIV-GLIGTRICIWRRNGLR--- 183 (299)
Q Consensus 117 ~~~~-~~--~-~l~s~~~dg~i~iwd~~~~~--~~~~~~~~~~~-~~~~~~~~--~~~l~-~~~d~~i~v~d~~~~~--- 183 (299)
++.| ++ + +|++|+.|++|++||+.+++ .+..+..|... ..++|+|+ +.+|+ ++.|+.|++||+++..
T Consensus 58 ~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~ 137 (297)
T 2pm7_B 58 RVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTS 137 (297)
T ss_dssp EEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBC
T ss_pred EEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCcee
Confidence 9999 32 4 99999999999999999874 55666666554 45999997 78888 9999999999998652
Q ss_pred -eeeeccCCccceeeeeccC-------------CCeEEEecCCCcEEEEEcCCcc----eeeeccccCCceeEEEeCCC-
Q 022324 184 -SVFPSREGTFMKGLCMRYF-------------DPEAVVGCEDGTARVFDMYSRK----CSQIIRMHCAPVTSLSLSED- 244 (299)
Q Consensus 184 -~~~~~~~~~~~~~~~~~~~-------------~~~l~s~~~d~~i~iwd~~~~~----~~~~~~~~~~~i~~~~~~~~- 244 (299)
..+..|...+. .++|+|. +..|++|+.|+.|++||+++++ ....+.+|...|.+++|+|+
T Consensus 138 ~~~~~~h~~~v~-~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~ 216 (297)
T 2pm7_B 138 PIIIDAHAIGVN-SASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTV 216 (297)
T ss_dssp CEEEECCSSCEE-EEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCC
T ss_pred eeeeecccCccc-eEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCC
Confidence 33445554443 3577775 3579999999999999998765 55677899999999999996
Q ss_pred ---CeEEEEeCCCcEEEEeCCCCc---eEEEe--eccCCCCcEEEEEccCCCCeEEeeecc
Q 022324 245 ---QLIISGSSLGSIAISGLSSDQ---RVATL--RSTDCTGHIICLMYPQFLHMLFFLCFL 297 (299)
Q Consensus 245 ---~~l~~~~~dg~i~iwd~~~~~---~~~~~--~~~~~~~~i~~~~~s~~g~~l~s~s~~ 297 (299)
.+|++++.|++|++||+++.+ ....+ ..+.. .|.+++|+|+|++|++++..
T Consensus 217 ~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~--~v~~~~~s~~g~~las~~~D 275 (297)
T 2pm7_B 217 LLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPD--VLWRASWSLSGNVLALSGGD 275 (297)
T ss_dssp SSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSS--CEEEEEECSSSCCEEEEETT
T ss_pred CCceEEEEEECCCcEEEEEeCCCCCccceeeeecccCCC--cEEEEEECCCCCEEEEEcCC
Confidence 589999999999999998643 12233 33444 89999999999999999864
No 16
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=2e-33 Score=231.61 Aligned_cols=254 Identities=17% Similarity=0.166 Sum_probs=207.2
Q ss_pred CCCCCCCCcchhccCcHHHHHHHhhccCccchhhHHHhhhhHHHHhhhhhHHHHHHhhhcCCCCCCCchhhhhhhhhhhc
Q 022324 13 PKKRSSKPRATIESLNGDIICMIFSSLGFFDLVRCSAVCKSWNAIINRCKLLQLLYCKLHGFSNTSGSSMRLHLEELAMK 92 (299)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~h~~~v~~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 92 (299)
+....+..+..+++|+......+..+.+|...|.+++|+|+++++++ ...|+.+++| ++...
T Consensus 36 ~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s----------------~~~d~~i~vw--d~~~~ 97 (312)
T 4ery_A 36 EWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVS----------------ASDDKTLKIW--DVSSG 97 (312)
T ss_dssp SEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEE----------------EETTSEEEEE--ETTTC
T ss_pred CEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEE----------------ECCCCEEEEE--ECCCC
Confidence 34445556788999998777666677799999999999999999886 2356778888 32221
Q ss_pred cccceeecCceeeEEeeccccCeeEEEe-cCC-EEEEEeCCCcEEEEecCCceeEEEecCCCcee-EEEEecCCCEEE-E
Q 022324 93 HHRFALEEGRIDIDQWKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNAAS-LVDFDFDESKIV-G 168 (299)
Q Consensus 93 ~~~~~l~~g~~~~~~~~~h~~~i~~~~~-~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~-~ 168 (299)
..+..+++|...|.++.| +++ +|++|+.|+.|++||+.+++++..+..|...+ .++|+|++++++ +
T Consensus 98 ----------~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 167 (312)
T 4ery_A 98 ----------KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSS 167 (312)
T ss_dssp ----------CEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred ----------cEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEE
Confidence 234566899999999999 555 99999999999999999999999998876555 499999999998 9
Q ss_pred EcCCeEEEEecCCceeeee--ccCCccceeeeeccCCCeEEEecCCCcEEEEEcCCcceeeeccccCCceeE--EEeC-C
Q 022324 169 LIGTRICIWRRNGLRSVFP--SREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTS--LSLS-E 243 (299)
Q Consensus 169 ~~d~~i~v~d~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~--~~~~-~ 243 (299)
+.|+.|++||+++.+.... .........+++++++.++++++.|+.|++||+++++.+..+..|...+.+ ..++ +
T Consensus 168 ~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (312)
T 4ery_A 168 SYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVT 247 (312)
T ss_dssp ETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECS
T ss_pred eCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeC
Confidence 9999999999998753322 222223335689999999999999999999999999998888777654332 2333 4
Q ss_pred C-CeEEEEeCCCcEEEEeCCCCceEEEeeccCCCCcEEEEEccCCCCeEEeeec
Q 022324 244 D-QLIISGSSLGSIAISGLSSDQRVATLRSTDCTGHIICLMYPQFLHMLFFLCF 296 (299)
Q Consensus 244 ~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~s~s~ 296 (299)
+ .+|++|+.||.|++||+++++.+..+.+|.. .|.+++|+|++.+|++++.
T Consensus 248 ~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~--~v~~~~~~p~~~~l~s~~~ 299 (312)
T 4ery_A 248 GGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTD--VVISTACHPTENIIASAAL 299 (312)
T ss_dssp SSCEEEECCTTSCEEEEETTTCCEEEEECCCSS--CEEEEEECSSSSEEEEEEC
T ss_pred CCcEEEEECCCCEEEEEECCCchhhhhhhccCC--cEEEEeecCcCCceEEEEc
Confidence 5 8999999999999999999999999999988 8999999999999999873
No 17
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=1.2e-32 Score=229.96 Aligned_cols=238 Identities=14% Similarity=0.082 Sum_probs=178.1
Q ss_pred cCccchhhHHHhhhhHHHHhhhhhHHHHHHhhhcCCCCCCCchhhhhhhhhhhccccceeecCceeeEEeeccccCeeEE
Q 022324 39 LGFFDLVRCSAVCKSWNAIINRCKLLQLLYCKLHGFSNTSGSSMRLHLEELAMKHHRFALEEGRIDIDQWKAHSVGVDQC 118 (299)
Q Consensus 39 ~~h~~~v~~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~h~~~i~~~ 118 (299)
..|...|.+++|+|+|+.|++. ++.+.|+|...+..-..... ............|...|.++
T Consensus 27 ~~~~~~v~~~~fs~dG~~l~~~-----------------sd~~~r~Wd~~~~~~~~~~~-~~~~~~~~~~~~~~~~v~~~ 88 (344)
T 4gqb_B 27 ACMERQLEAARYRSDGALLLGA-----------------SSLSGRCWAGSLWLFKDPCA-APNEGFCSAGVQTEAGVADL 88 (344)
T ss_dssp SSCCSEEEEEEECTTSCEEEEE-----------------ECCSSSCCCEEEEEESSGGG-TTCGGGCSEEEEESSCEEEE
T ss_pred ccccCCEEEEEECCCCCEEEEE-----------------eCCceEEeeceeeeeccccc-cCCcceeeeeeccCCCEEEE
Confidence 3567779999999999998861 34455665321100000000 00000011224577889999
Q ss_pred Ee-cCCEEEEEeCCCcEEEEecCCceeEEEe----cCCCc-eeEEEEecCCCEEE-EEcCCeEEEEecCCce--eeeecc
Q 022324 119 RM-KRGLILTGVGDKVMRLWSLEGYKCVEEY----SLPNA-ASLVDFDFDESKIV-GLIGTRICIWRRNGLR--SVFPSR 189 (299)
Q Consensus 119 ~~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~----~~~~~-~~~~~~~~~~~~l~-~~~d~~i~v~d~~~~~--~~~~~~ 189 (299)
+| +++.|++|+.||+|++||+.+++.+... .+|.. +.+++|+|++++|+ ++.|+.|++||+++++ ..+..|
T Consensus 89 ~~s~d~~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h 168 (344)
T 4gqb_B 89 TWVGERGILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAH 168 (344)
T ss_dssp EEETTTEEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCC
T ss_pred EEeCCCeEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCc
Confidence 99 6669999999999999999988765433 35654 44599999999999 9999999999999876 345556
Q ss_pred CCccceeeeeccCCCe-EEEecCCCcEEEEEcCCcceeeecc--ccCCceeEEEeCCC--CeEEEEeCCCcEEEEeCCCC
Q 022324 190 EGTFMKGLCMRYFDPE-AVVGCEDGTARVFDMYSRKCSQIIR--MHCAPVTSLSLSED--QLIISGSSLGSIAISGLSSD 264 (299)
Q Consensus 190 ~~~~~~~~~~~~~~~~-l~s~~~d~~i~iwd~~~~~~~~~~~--~~~~~i~~~~~~~~--~~l~~~~~dg~i~iwd~~~~ 264 (299)
.+.+. .+++++++.. +++++.|+.|++||+++++....+. .+...+.+++|+|+ ++|++|+.||.|++||++++
T Consensus 169 ~~~V~-~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~ 247 (344)
T 4gqb_B 169 AAQVT-CVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKST 247 (344)
T ss_dssp SSCEE-EEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC-
T ss_pred CCceE-EEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCC
Confidence 65544 4578888764 7899999999999999998887764 45567999999985 78999999999999999999
Q ss_pred ceEEEeeccCCCCcEEEEEccCCC-CeEEeeecc
Q 022324 265 QRVATLRSTDCTGHIICLMYPQFL-HMLFFLCFL 297 (299)
Q Consensus 265 ~~~~~~~~~~~~~~i~~~~~s~~g-~~l~s~s~~ 297 (299)
+++.++.+|.. .|++++|+|+| ++|++||.-
T Consensus 248 ~~~~~~~~h~~--~v~~v~fsp~g~~~lasgs~D 279 (344)
T 4gqb_B 248 SCVLSSAVHSQ--CVTGLVFSPHSVPFLASLSED 279 (344)
T ss_dssp -CCEEEECCSS--CEEEEEECSSSSCCEEEEETT
T ss_pred cEEEEEcCCCC--CEEEEEEccCCCeEEEEEeCC
Confidence 99999999988 99999999998 578888753
No 18
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=3.2e-32 Score=231.64 Aligned_cols=223 Identities=15% Similarity=0.232 Sum_probs=184.0
Q ss_pred hhhHHHhhhhHHHHhhhhhHHHHHHhhhcCCCCCCCchhhhhhhhhhhccccceeecCceeeEEeeccccCeeEEEe-cC
Q 022324 44 LVRCSAVCKSWNAIINRCKLLQLLYCKLHGFSNTSGSSMRLHLEELAMKHHRFALEEGRIDIDQWKAHSVGVDQCRM-KR 122 (299)
Q Consensus 44 ~v~~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~h~~~i~~~~~-~~ 122 (299)
.|++++|+|+++++++ ...|+.+++| ++.. ...+..+.+|...|.++.| ++
T Consensus 125 ~v~~v~~s~dg~~l~s----------------~~~d~~i~iw--d~~~----------~~~~~~~~~h~~~v~~~~~~p~ 176 (393)
T 1erj_A 125 YIRSVCFSPDGKFLAT----------------GAEDRLIRIW--DIEN----------RKIVMILQGHEQDIYSLDYFPS 176 (393)
T ss_dssp BEEEEEECTTSSEEEE----------------EETTSCEEEE--ETTT----------TEEEEEECCCSSCEEEEEECTT
T ss_pred eEEEEEECCCCCEEEE----------------EcCCCeEEEE--ECCC----------CcEEEEEccCCCCEEEEEEcCC
Confidence 4788999999988886 3366778888 3222 2234567899999999999 66
Q ss_pred C-EEEEEeCCCcEEEEecCCceeEEEecCCCceeEEEEec-CCCEEE-EEcCCeEEEEecCCceeee---------eccC
Q 022324 123 G-LILTGVGDKVMRLWSLEGYKCVEEYSLPNAASLVDFDF-DESKIV-GLIGTRICIWRRNGLRSVF---------PSRE 190 (299)
Q Consensus 123 ~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~-~~~d~~i~v~d~~~~~~~~---------~~~~ 190 (299)
+ +|++++.|++|++||+.++++...+..+..+..++++| ++++++ ++.|+.|++||++++.... ..|.
T Consensus 177 ~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~ 256 (393)
T 1erj_A 177 GDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHK 256 (393)
T ss_dssp SSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCS
T ss_pred CCEEEEecCCCcEEEEECCCCeeEEEEEcCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCC
Confidence 6 99999999999999999999998888888888899999 888888 9999999999998765322 2233
Q ss_pred CccceeeeeccCCCeEEEecCCCcEEEEEcCCc------------ceeeeccccCCceeEEEeCCC-CeEEEEeCCCcEE
Q 022324 191 GTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSR------------KCSQIIRMHCAPVTSLSLSED-QLIISGSSLGSIA 257 (299)
Q Consensus 191 ~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~------------~~~~~~~~~~~~i~~~~~~~~-~~l~~~~~dg~i~ 257 (299)
..+. .+++++++..+++|+.|+.|++||+++. .+...+.+|...|.+++++|+ .+|++|+.|+.|+
T Consensus 257 ~~v~-~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~ 335 (393)
T 1erj_A 257 DSVY-SVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVL 335 (393)
T ss_dssp SCEE-EEEECTTSSEEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEE
T ss_pred CCEE-EEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEE
Confidence 3333 4688899999999999999999999753 344566689999999999999 9999999999999
Q ss_pred EEeCCCCceEEEeeccCCCCcEEEEEccC------CCCeEEeeecc
Q 022324 258 ISGLSSDQRVATLRSTDCTGHIICLMYPQ------FLHMLFFLCFL 297 (299)
Q Consensus 258 iwd~~~~~~~~~~~~~~~~~~i~~~~~s~------~g~~l~s~s~~ 297 (299)
+||+++++++..+.+|.. .|.+++|++ ++.+|++||.-
T Consensus 336 iwd~~~~~~~~~l~~h~~--~v~~v~~~~~~~~~p~~~~l~sgs~D 379 (393)
T 1erj_A 336 FWDKKSGNPLLMLQGHRN--SVISVAVANGSSLGPEYNVFATGSGD 379 (393)
T ss_dssp EEETTTCCEEEEEECCSS--CEEEEEECSSCTTCTTCEEEEEEETT
T ss_pred EEECCCCeEEEEECCCCC--CEEEEEecCCcCcCCCCCEEEEECCC
Confidence 999999999999999988 899999876 68899999854
No 19
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=1.5e-31 Score=223.45 Aligned_cols=235 Identities=15% Similarity=0.131 Sum_probs=182.0
Q ss_pred hhccCccchhhHHHh-----hh-hHHHHhhhhhHHHHHHhhhcCCCCCCCchhhhhhhhhhhccccceeecCceeeEEee
Q 022324 36 FSSLGFFDLVRCSAV-----CK-SWNAIINRCKLLQLLYCKLHGFSNTSGSSMRLHLEELAMKHHRFALEEGRIDIDQWK 109 (299)
Q Consensus 36 ~~~~~h~~~v~~~~~-----~~-~~~~l~~~~~~w~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~ 109 (299)
..+.+|.+.|++++| ++ ++++|++ ...|+++++|. +...... .........+.
T Consensus 15 ~~l~gH~~~V~~~~~~~s~~~~~d~~~l~s----------------gs~D~~v~iWd--~~~~~~~---~~~~~~~~~l~ 73 (343)
T 2xzm_R 15 GILEGHSDWVTSIVAGFSQKENEDSPVLIS----------------GSRDKTVMIWK--LYEEEQN---GYFGIPHKALT 73 (343)
T ss_dssp EEEECCSSCEEEEEECCCSSTTCCCCEEEE----------------EETTSCEEEEE--ECSSCCS---SBSEEEEEEEC
T ss_pred eeeccchhhhhheeeEEEeecCCCCCEEEE----------------EcCCCEEEEEE--CCcCCcc---cccccccchhc
Confidence 356699999999998 66 7888887 33678888883 2211110 01122356789
Q ss_pred ccccCeeEEEe-cCC-EEEEEeCCCcEEEEecCCceeEEEecCCCcee-EEEEecCCCEEE-EEcCCeEEEEecCCceee
Q 022324 110 AHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNAAS-LVDFDFDESKIV-GLIGTRICIWRRNGLRSV 185 (299)
Q Consensus 110 ~h~~~i~~~~~-~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~-~~~d~~i~v~d~~~~~~~ 185 (299)
+|...|.++.| +++ ++++|+.|++|++||+.+++++..+..|...+ .++|+|++++|+ ++.|+.|++||+......
T Consensus 74 ~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~ 153 (343)
T 2xzm_R 74 GHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKF 153 (343)
T ss_dssp CCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEE
T ss_pred cCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCcee
Confidence 99999999999 555 99999999999999999999999999886555 499999999999 999999999999854321
Q ss_pred -ee---ccCCccceeeeeccCC----------CeEEEecCCCcEEEEEcCCcceeeeccccCCceeEEEeCCC-CeEEEE
Q 022324 186 -FP---SREGTFMKGLCMRYFD----------PEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISG 250 (299)
Q Consensus 186 -~~---~~~~~~~~~~~~~~~~----------~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~-~~l~~~ 250 (299)
.. .+...+ ..+++++.+ +.+++++.|+.|++||. +.+....+..|...|.+++|+|+ ++|++|
T Consensus 154 ~~~~~~~~~~~v-~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~-~~~~~~~~~~h~~~v~~~~~s~~g~~l~sg 231 (343)
T 2xzm_R 154 SSAEKENHSDWV-SCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNT-NFQIRYTFKAHESNVNHLSISPNGKYIATG 231 (343)
T ss_dssp ECCTTTSCSSCE-EEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEET-TTEEEEEEECCSSCEEEEEECTTSSEEEEE
T ss_pred eeecccCCCcee-eeeeeccccccccccCCCCCEEEEEcCCCEEEEEcC-CCceeEEEcCccccceEEEECCCCCEEEEE
Confidence 11 222222 245666665 67999999999999994 46667778899999999999999 999999
Q ss_pred eCCCcEEEEeCCC-CceEEEeeccCCCCcEEEEEccCCCCeEEeeec
Q 022324 251 SSLGSIAISGLSS-DQRVATLRSTDCTGHIICLMYPQFLHMLFFLCF 296 (299)
Q Consensus 251 ~~dg~i~iwd~~~-~~~~~~~~~~~~~~~i~~~~~s~~g~~l~s~s~ 296 (299)
+.||.|++||+.+ ......+. +.. .|.+++|+|++++|++|+-
T Consensus 232 s~dg~v~iwd~~~~~~~~~~~~-~~~--~v~~v~~sp~~~~la~~~d 275 (343)
T 2xzm_R 232 GKDKKLLIWDILNLTYPQREFD-AGS--TINQIAFNPKLQWVAVGTD 275 (343)
T ss_dssp ETTCEEEEEESSCCSSCSEEEE-CSS--CEEEEEECSSSCEEEEEES
T ss_pred cCCCeEEEEECCCCcccceeec-CCC--cEEEEEECCCCCEEEEECC
Confidence 9999999999954 44444443 333 7999999999999887753
No 20
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=3e-32 Score=225.08 Aligned_cols=229 Identities=14% Similarity=0.057 Sum_probs=176.3
Q ss_pred cCccchhhHHHhhhhHHHHhhhhhHHHHHHhhhcCCCCCCCchhhhhhhhhhhccccceeecCc-eeeEEeeccccCeeE
Q 022324 39 LGFFDLVRCSAVCKSWNAIINRCKLLQLLYCKLHGFSNTSGSSMRLHLEELAMKHHRFALEEGR-IDIDQWKAHSVGVDQ 117 (299)
Q Consensus 39 ~~h~~~v~~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~g~-~~~~~~~~h~~~i~~ 117 (299)
.+|.+.|++++|++++++|++ ...|+++++|.. . .+. ..+..+++|.++|++
T Consensus 10 ~~H~~~V~~v~~s~~g~~las----------------gs~D~~v~lwd~--~---------~~~~~~~~~l~gH~~~V~~ 62 (316)
T 3bg1_A 10 TSHEDMIHDAQMDYYGTRLAT----------------CSSDRSVKIFDV--R---------NGGQILIADLRGHEGPVWQ 62 (316)
T ss_dssp ----CCEEEEEECGGGCEEEE----------------EETTTEEEEEEE--E---------TTEEEEEEEEECCSSCEEE
T ss_pred ccccCeEEEeeEcCCCCEEEE----------------EeCCCeEEEEEe--c---------CCCcEEEEEEcCCCccEEE
Confidence 489999999999999999997 346788899832 2 222 235677999999999
Q ss_pred EEe-cC--C-EEEEEeCCCcEEEEecCCce--eEEEecCCCce-eEEEEecC--CCEEE-EEcCCeEEEEecCCce----
Q 022324 118 CRM-KR--G-LILTGVGDKVMRLWSLEGYK--CVEEYSLPNAA-SLVDFDFD--ESKIV-GLIGTRICIWRRNGLR---- 183 (299)
Q Consensus 118 ~~~-~~--~-~l~s~~~dg~i~iwd~~~~~--~~~~~~~~~~~-~~~~~~~~--~~~l~-~~~d~~i~v~d~~~~~---- 183 (299)
+.| ++ + +|++|+.|++|++||+.+++ ....+..|... ..++|+|+ +.+|+ ++.|+.|++||+++..
T Consensus 63 v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~ 142 (316)
T 3bg1_A 63 VAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEV 142 (316)
T ss_dssp EEECCGGGSSCEEEEETTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEE
T ss_pred EEeCCCCCCCEEEEEECCCEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcce
Confidence 999 32 4 99999999999999999874 56667777654 45999998 67788 9999999999998752
Q ss_pred -eeeeccCCccceeeeeccC-----------------CCeEEEecCCCcEEEEEcCCc---ceeeeccccCCceeEEEeC
Q 022324 184 -SVFPSREGTFMKGLCMRYF-----------------DPEAVVGCEDGTARVFDMYSR---KCSQIIRMHCAPVTSLSLS 242 (299)
Q Consensus 184 -~~~~~~~~~~~~~~~~~~~-----------------~~~l~s~~~d~~i~iwd~~~~---~~~~~~~~~~~~i~~~~~~ 242 (299)
..+..|..... .++|+|. +..|++|+.|+.|++||++.. +.+..+.+|...|.+++|+
T Consensus 143 ~~~~~~h~~~v~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~s 221 (316)
T 3bg1_A 143 KKINNAHTIGCN-AVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWA 221 (316)
T ss_dssp CCBTTSSSSCBC-CCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECC
T ss_pred eeeeccccCCcc-eEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEec
Confidence 12233333322 3466665 356999999999999999754 4667788999999999999
Q ss_pred CC-----CeEEEEeCCCcEEEEeCCCC---c-eEEEeeccCCCCcEEEEEccCCCCeEEeeecc
Q 022324 243 ED-----QLIISGSSLGSIAISGLSSD---Q-RVATLRSTDCTGHIICLMYPQFLHMLFFLCFL 297 (299)
Q Consensus 243 ~~-----~~l~~~~~dg~i~iwd~~~~---~-~~~~~~~~~~~~~i~~~~~s~~g~~l~s~s~~ 297 (299)
|+ .+|++|+.|++|++||+++. + ....+..|.. .|.+++|+|+|++|++|+.-
T Consensus 222 p~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~--~v~~v~~sp~g~~las~~~D 283 (316)
T 3bg1_A 222 PSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFND--VVWHVSWSITANILAVSGGD 283 (316)
T ss_dssp CCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEECSS--CEEEEEECTTTCCEEEEESS
T ss_pred CCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhcCCC--cEEEEEEcCCCCEEEEEcCC
Confidence 86 58999999999999999762 1 2234555666 89999999999999999854
No 21
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=2.6e-32 Score=244.77 Aligned_cols=270 Identities=11% Similarity=0.073 Sum_probs=208.2
Q ss_pred cchhccCcHHHHHHHhhccCccchhhHHHhhhhHHHHhh-----hhhHHHHHHhhhcCCCCCCCchhhhhhhhhhhcccc
Q 022324 21 RATIESLNGDIICMIFSSLGFFDLVRCSAVCKSWNAIIN-----RCKLLQLLYCKLHGFSNTSGSSMRLHLEELAMKHHR 95 (299)
Q Consensus 21 ~~~~~~~~~~~~~~i~~~~~h~~~v~~~~~~~~~~~l~~-----~~~~w~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 95 (299)
...+.+|+.+....+..+.+|.+.|++++|+|++++||+ ++++|+..............+. -.+.++.|+|++
T Consensus 38 ~~~v~l~~~~~~~~~~~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~--~~v~~v~fs~dg 115 (611)
T 1nr0_A 38 GTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFS--GPVKDISWDSES 115 (611)
T ss_dssp TTEEEEEETTCSSCCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSS--SCEEEEEECTTS
T ss_pred CCEEEEecCCCcccCeEecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeEeecccC--CceEEEEECCCC
Confidence 457889998776667778899999999999999999998 5778864211100000000011 123367788888
Q ss_pred ceeecCce---------------eeEEeeccccCeeEEEe-cCC--EEEEEeCCCcEEEEecCCceeEEEecCCCcee-E
Q 022324 96 FALEEGRI---------------DIDQWKAHSVGVDQCRM-KRG--LILTGVGDKVMRLWSLEGYKCVEEYSLPNAAS-L 156 (299)
Q Consensus 96 ~~l~~g~~---------------~~~~~~~h~~~i~~~~~-~~~--~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~-~ 156 (299)
+.++.+.. ....+.+|...|+++.| |++ .|++|+.|++|++||..++++...+..|...+ .
T Consensus 116 ~~l~~~~~~~~~~~~v~~wd~~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~ 195 (611)
T 1nr0_A 116 KRIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHS 195 (611)
T ss_dssp CEEEEEECCSSCSEEEEETTTCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEE
T ss_pred CEEEEEECCCCceeEEEEeeCCCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEE
Confidence 77664331 13456899999999999 555 69999999999999999999999999887655 4
Q ss_pred EEEecCCCEEE-EEcCCeEEEEecCCceee--ee-------ccCCccceeeeeccCCCeEEEecCCCcEEEEEcCCccee
Q 022324 157 VDFDFDESKIV-GLIGTRICIWRRNGLRSV--FP-------SREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCS 226 (299)
Q Consensus 157 ~~~~~~~~~l~-~~~d~~i~v~d~~~~~~~--~~-------~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~ 226 (299)
++|+|++++|+ ++.|++|++||+.+++.. +. .|.+.+. .++|+|++..|++++.|++|++||+++++.+
T Consensus 196 v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~-~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~ 274 (611)
T 1nr0_A 196 VRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVF-GLTWSPDGTKIASASADKTIKIWNVATLKVE 274 (611)
T ss_dssp EEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEE-EEEECTTSSEEEEEETTSEEEEEETTTTEEE
T ss_pred EEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEE-EEEECCCCCEEEEEeCCCeEEEEeCCCCcee
Confidence 99999999999 999999999999876532 21 3444443 4689999999999999999999999877654
Q ss_pred ee-------------------------------------------ccccCCceeEEEeCCC-CeEEEEeCCCcEEEEeCC
Q 022324 227 QI-------------------------------------------IRMHCAPVTSLSLSED-QLIISGSSLGSIAISGLS 262 (299)
Q Consensus 227 ~~-------------------------------------------~~~~~~~i~~~~~~~~-~~l~~~~~dg~i~iwd~~ 262 (299)
.. +.+|...|++++|+|+ ++|++++.|++|++||+.
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~ 354 (611)
T 1nr0_A 275 KTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDIS 354 (611)
T ss_dssp EEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred eeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECC
Confidence 32 3468889999999999 999999999999999999
Q ss_pred CCceEEEe-eccCCCCcEEEEEccCCCCeEEeeec
Q 022324 263 SDQRVATL-RSTDCTGHIICLMYPQFLHMLFFLCF 296 (299)
Q Consensus 263 ~~~~~~~~-~~~~~~~~i~~~~~s~~g~~l~s~s~ 296 (299)
++++...+ ..|.. .|.+++|++++ .|++++.
T Consensus 355 ~~~~~~~~~~~h~~--~v~~~~~s~~~-~l~s~s~ 386 (611)
T 1nr0_A 355 TGISNRVFPDVHAT--MITGIKTTSKG-DLFTVSW 386 (611)
T ss_dssp TCCEEECSSCSCSS--CEEEEEECTTS-CEEEEET
T ss_pred CCceeeecccCCcc--eEEEEEECCCC-cEEEEEc
Confidence 99887665 45655 89999999876 5566654
No 22
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=1.8e-31 Score=227.05 Aligned_cols=240 Identities=15% Similarity=0.153 Sum_probs=180.3
Q ss_pred hccCccchhhHHHhhhhHHHHhhhhhHHHHHHhhhcCCCCCCCchhhhhhhhhhhccccceeecCce--------eeEEe
Q 022324 37 SSLGFFDLVRCSAVCKSWNAIINRCKLLQLLYCKLHGFSNTSGSSMRLHLEELAMKHHRFALEEGRI--------DIDQW 108 (299)
Q Consensus 37 ~~~~h~~~v~~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~g~~--------~~~~~ 108 (299)
..++|.+.|.|++|+|+++++++. .+..+++| ++..+.....+..... .....
T Consensus 59 ~~~~h~~~V~~v~fspdg~~la~g-----------------~~~~v~i~--~~~~g~~~~~l~~~~~~~~~~~~~~~~~~ 119 (393)
T 1erj_A 59 KSLDHTSVVCCVKFSNDGEYLATG-----------------CNKTTQVY--RVSDGSLVARLSDDSAANKDPENLNTSSS 119 (393)
T ss_dssp EEEECSSCCCEEEECTTSSEEEEE-----------------CBSCEEEE--ETTTCCEEEEECC----------------
T ss_pred EecCCCCEEEEEEECCCCCEEEEE-----------------cCCcEEEE--EecCCCEEEEecCcccccccccccccccc
Confidence 345799999999999999999871 23344555 2222111111100000 00111
Q ss_pred eccccCeeEEEe-cCC-EEEEEeCCCcEEEEecCCceeEEEecCCCcee-EEEEecCCCEEE-EEcCCeEEEEecCCcee
Q 022324 109 KAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNAAS-LVDFDFDESKIV-GLIGTRICIWRRNGLRS 184 (299)
Q Consensus 109 ~~h~~~i~~~~~-~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~-~~~d~~i~v~d~~~~~~ 184 (299)
..+...|.++.| +++ +|++|+.|++|++||+.+++.+..+..|...+ .++|+|+++.|+ ++.|+.|++||+++++.
T Consensus 120 ~~~~~~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~ 199 (393)
T 1erj_A 120 PSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQC 199 (393)
T ss_dssp -CCCCBEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEE
T ss_pred CCCceeEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCee
Confidence 233446999999 666 99999999999999999999999999887655 499999999999 99999999999998764
Q ss_pred eeeccCCccceeeeecc-CCCeEEEecCCCcEEEEEcCCcceeeec-------cccCCceeEEEeCCC-CeEEEEeCCCc
Q 022324 185 VFPSREGTFMKGLCMRY-FDPEAVVGCEDGTARVFDMYSRKCSQII-------RMHCAPVTSLSLSED-QLIISGSSLGS 255 (299)
Q Consensus 185 ~~~~~~~~~~~~~~~~~-~~~~l~s~~~d~~i~iwd~~~~~~~~~~-------~~~~~~i~~~~~~~~-~~l~~~~~dg~ 255 (299)
............+++++ ++..+++|+.|+.|++||+++++.+..+ .+|...|.+++|+|+ ++|++|+.|+.
T Consensus 200 ~~~~~~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~ 279 (393)
T 1erj_A 200 SLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRS 279 (393)
T ss_dssp EEEEECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred EEEEEcCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCE
Confidence 33222222233457887 6778999999999999999998877666 468899999999999 99999999999
Q ss_pred EEEEeCCCC------------ceEEEeeccCCCCcEEEEEccCCCCeEEeeecc
Q 022324 256 IAISGLSSD------------QRVATLRSTDCTGHIICLMYPQFLHMLFFLCFL 297 (299)
Q Consensus 256 i~iwd~~~~------------~~~~~~~~~~~~~~i~~~~~s~~g~~l~s~s~~ 297 (299)
|++||+++. .+...+.+|.. .|.+++|+|++++|++|+.-
T Consensus 280 v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~--~v~~~~~~~~~~~l~sgs~D 331 (393)
T 1erj_A 280 VKLWNLQNANNKSDSKTPNSGTCEVTYIGHKD--FVLSVATTQNDEYILSGSKD 331 (393)
T ss_dssp EEEEEC---------------CEEEEEECCSS--CEEEEEECGGGCEEEEEETT
T ss_pred EEEEECCCCCCcccccCCCCCcceEEEecccC--cEEEEEECCCCCEEEEEeCC
Confidence 999999753 45667778887 89999999999999999864
No 23
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=3.6e-32 Score=227.33 Aligned_cols=258 Identities=13% Similarity=0.130 Sum_probs=198.5
Q ss_pred CCCCCCCCCCCcchhccCcHHHHHHHh---hccCccchhhHHHhhhhHHHHhhhhhHHHHHHhhhcCCCCCCCchhhhhh
Q 022324 10 SPPPKKRSSKPRATIESLNGDIICMIF---SSLGFFDLVRCSAVCKSWNAIINRCKLLQLLYCKLHGFSNTSGSSMRLHL 86 (299)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~i~---~~~~h~~~v~~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~d~~~~~~~ 86 (299)
++.+..+.++.+.++++|+.+....+. ...+|.+.|.+++|+|++++|++ ...|.++++|.
T Consensus 26 p~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s----------------~s~D~~v~iw~ 89 (345)
T 3fm0_A 26 PAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLAS----------------ASFDATTCIWK 89 (345)
T ss_dssp TTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEE----------------EETTSCEEEEE
T ss_pred CCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEE----------------EECCCcEEEEE
Confidence 345566777788999999987653221 22489999999999999999987 33577788883
Q ss_pred hhhhhccccceeecCc-eeeEEeeccccCeeEEEe-cCC-EEEEEeCCCcEEEEecCCc---eeEEEecCCCcee-EEEE
Q 022324 87 EELAMKHHRFALEEGR-IDIDQWKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGY---KCVEEYSLPNAAS-LVDF 159 (299)
Q Consensus 87 ~~~~~~~~~~~l~~g~-~~~~~~~~h~~~i~~~~~-~~~-~l~s~~~dg~i~iwd~~~~---~~~~~~~~~~~~~-~~~~ 159 (299)
. ..+. ..+.++.+|.+.|.++.| +++ +|++|+.|++|++||+.++ +++..+..|...+ .++|
T Consensus 90 ~-----------~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~ 158 (345)
T 3fm0_A 90 K-----------NQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVW 158 (345)
T ss_dssp E-----------CCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEE
T ss_pred c-----------cCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEE
Confidence 2 1122 235677899999999999 666 9999999999999999865 3456677776555 4999
Q ss_pred ecCCCEEE-EEcCCeEEEEecCCce----eeeeccCCccceeeeeccCCCeEEEecCCCcEEEEEcCCc-----------
Q 022324 160 DFDESKIV-GLIGTRICIWRRNGLR----SVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSR----------- 223 (299)
Q Consensus 160 ~~~~~~l~-~~~d~~i~v~d~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~----------- 223 (299)
+|++++|+ ++.|+.|++||.++.. ..+..|...+. .++|+|++.+|++++.|+.|++||....
T Consensus 159 ~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~-~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~ 237 (345)
T 3fm0_A 159 HPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVW-SLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGS 237 (345)
T ss_dssp CSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEE-EEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC--
T ss_pred CCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceE-EEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeecc
Confidence 99999999 9999999999998764 23455555544 4689999999999999999999996432
Q ss_pred ----ceeeeccc-cCCceeEEEeCCC-CeEEEEeCCCcEEEEeCCCCc----e-----EEEeeccCCCCcEEEEEccCCC
Q 022324 224 ----KCSQIIRM-HCAPVTSLSLSED-QLIISGSSLGSIAISGLSSDQ----R-----VATLRSTDCTGHIICLMYPQFL 288 (299)
Q Consensus 224 ----~~~~~~~~-~~~~i~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~----~-----~~~~~~~~~~~~i~~~~~s~~g 288 (299)
+++..+.+ |...|.+++|+|+ ..|++++.|+.|++|+...+. . .....+|.. .|++++|+|++
T Consensus 238 ~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~--~V~~v~~~p~~ 315 (345)
T 3fm0_A 238 DPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQ--DVNCVAWNPKE 315 (345)
T ss_dssp -CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSS--CEEEEEECSSS
T ss_pred CCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccC--cEeEeEEeCCC
Confidence 22333333 7889999999999 899999999999999987542 1 122345666 89999999998
Q ss_pred C-eEEeeecc
Q 022324 289 H-MLFFLCFL 297 (299)
Q Consensus 289 ~-~l~s~s~~ 297 (299)
. +|++||.-
T Consensus 316 ~~~laS~s~D 325 (345)
T 3fm0_A 316 PGLLASCSDD 325 (345)
T ss_dssp TTEEEEEETT
T ss_pred ceEEEEcCCC
Confidence 4 89998864
No 24
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.98 E-value=3.5e-31 Score=221.38 Aligned_cols=233 Identities=14% Similarity=0.079 Sum_probs=184.4
Q ss_pred hhccCccc-hhhHHHhhhhHHHHhhhhhHHHHHHhhhcCCCCCCCchhhhhhhhhhhccccceeecCceeeEEeeccccC
Q 022324 36 FSSLGFFD-LVRCSAVCKSWNAIINRCKLLQLLYCKLHGFSNTSGSSMRLHLEELAMKHHRFALEEGRIDIDQWKAHSVG 114 (299)
Q Consensus 36 ~~~~~h~~-~v~~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~h~~~ 114 (299)
..+.+|.+ .|.+++|+|++++|++ ...|+.+++|.. ...... .......+|...
T Consensus 9 ~~~~~h~~~~v~~l~~sp~g~~las----------------~~~D~~i~iw~~--~~~~~~-------~~~~~~~~h~~~ 63 (345)
T 3fm0_A 9 GRVPAHPDSRCWFLAWNPAGTLLAS----------------CGGDRRIRIWGT--EGDSWI-------CKSVLSEGHQRT 63 (345)
T ss_dssp EEECCSTTSCEEEEEECTTSSCEEE----------------EETTSCEEEEEE--ETTEEE-------EEEEECSSCSSC
T ss_pred eeecCCCCCcEEEEEECCCCCEEEE----------------EcCCCeEEEEEc--CCCcce-------eeeeeccccCCc
Confidence 35568887 8999999999999997 336788888832 111100 011223689999
Q ss_pred eeEEEe-cCC-EEEEEeCCCcEEEEecCCc--eeEEEecCCCcee-EEEEecCCCEEE-EEcCCeEEEEecCCce-----
Q 022324 115 VDQCRM-KRG-LILTGVGDKVMRLWSLEGY--KCVEEYSLPNAAS-LVDFDFDESKIV-GLIGTRICIWRRNGLR----- 183 (299)
Q Consensus 115 i~~~~~-~~~-~l~s~~~dg~i~iwd~~~~--~~~~~~~~~~~~~-~~~~~~~~~~l~-~~~d~~i~v~d~~~~~----- 183 (299)
|.+++| +++ +|++|+.|+++++||..++ +++..+.+|...+ .++|+|++++|+ ++.|+.|++||+.+..
T Consensus 64 v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~ 143 (345)
T 3fm0_A 64 VRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECV 143 (345)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEE
T ss_pred EEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEE
Confidence 999999 666 9999999999999998876 4677888886555 499999999999 9999999999998653
Q ss_pred eeeeccCCccceeeeeccCCCeEEEecCCCcEEEEEcCCcc--eeeeccccCCceeEEEeCCC-CeEEEEeCCCcEEEEe
Q 022324 184 SVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRK--CSQIIRMHCAPVTSLSLSED-QLIISGSSLGSIAISG 260 (299)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~--~~~~~~~~~~~i~~~~~~~~-~~l~~~~~dg~i~iwd 260 (299)
..+..+...+. .++|+|++..|++++.|+.|++||.++++ ....+.+|...|.+++|+|+ ++|++|+.|++|++||
T Consensus 144 ~~~~~h~~~v~-~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~ 222 (345)
T 3fm0_A 144 SVLNSHTQDVK-HVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWR 222 (345)
T ss_dssp EEECCCCSCEE-EEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred EEecCcCCCeE-EEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEec
Confidence 23344444443 46899999999999999999999998765 34677799999999999999 9999999999999999
Q ss_pred CCC---------------CceEEEeec-cCCCCcEEEEEccCCCCeEEeeec
Q 022324 261 LSS---------------DQRVATLRS-TDCTGHIICLMYPQFLHMLFFLCF 296 (299)
Q Consensus 261 ~~~---------------~~~~~~~~~-~~~~~~i~~~~~s~~g~~l~s~s~ 296 (299)
... .+++.++.+ |.. .|.+++|+|++..|++++.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~--~v~~v~~~~~~~~l~s~~~ 272 (345)
T 3fm0_A 223 QYLPGNEQGVACSGSDPSWKCICTLSGFHSR--TIYDIAWCQLTGALATACG 272 (345)
T ss_dssp EECTTCTTCCCCC---CEEEEEEEECSSCSS--CEEEEEECTTTCCEEEEET
T ss_pred cccCCCCccceeeccCCccceeEEecCCCCC--cEEEEEEecCCCEEEEEeC
Confidence 632 134555555 444 8999999999999999875
No 25
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.98 E-value=9.3e-32 Score=239.45 Aligned_cols=246 Identities=16% Similarity=0.200 Sum_probs=203.6
Q ss_pred CCCCCcchhccCcHHHHHHHhhccCccchhhHHHhhhhHHHHhhhhhHHHHHHhhhcCCCCCCCchhhhhhhhhhhcccc
Q 022324 16 RSSKPRATIESLNGDIICMIFSSLGFFDLVRCSAVCKSWNAIINRCKLLQLLYCKLHGFSNTSGSSMRLHLEELAMKHHR 95 (299)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~i~~~~~h~~~v~~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 95 (299)
..+..+..+++|+.+. .++..+.+|...|.+++++|+++.+++ ...++.+++|..
T Consensus 319 ~t~~~d~~i~~w~~~~-~~~~~~~~~~~~v~~~~~s~~g~~l~~----------------~~~dg~v~~~~~-------- 373 (577)
T 2ymu_A 319 ASASDDKTVKLWNRNG-QHLQTLTGHSSSVWGVAFSPDGQTIAS----------------ASDDKTVKLWNR-------- 373 (577)
T ss_dssp EEEETTSCEEEEETTS-CEEEEECCCSSCEEEEEECTTSSEEEE----------------EETTSEEEEEET--------
T ss_pred EEEeCCCeEEEEeCCC-CeeEEEeCCCCCEEEEEECCCCCEEEE----------------EeCCCEEEEEcC--------
Confidence 3344566788898653 345566789999999999999999886 225566677721
Q ss_pred ceeecCceeeEEeeccccCeeEEEe-cCC-EEEEEeCCCcEEEEecCCceeEEEecCCCceeE-EEEecCCCEEE-EEcC
Q 022324 96 FALEEGRIDIDQWKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNAASL-VDFDFDESKIV-GLIG 171 (299)
Q Consensus 96 ~~l~~g~~~~~~~~~h~~~i~~~~~-~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~-~~~d 171 (299)
....+..+.+|...|.++.| +++ +|++++.|+.|++||. +++.+..+..|...+. ++|+|+++.++ ++.|
T Consensus 374 -----~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d 447 (577)
T 2ymu_A 374 -----NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDDQTIASASDD 447 (577)
T ss_dssp -----TCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TCCEEEEEECCSSCEEEEEECTTSSEEEEEETT
T ss_pred -----CCCEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEcCC
Confidence 12235567899999999999 666 9999999999999995 5778888887766554 99999999999 9999
Q ss_pred CeEEEEecCCce-eeeeccCCccceeeeeccCCCeEEEecCCCcEEEEEcCCcceeeeccccCCceeEEEeCCC-CeEEE
Q 022324 172 TRICIWRRNGLR-SVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIIS 249 (299)
Q Consensus 172 ~~i~v~d~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~-~~l~~ 249 (299)
+.|++||..... ..+..+...+. .++++|++..+++++.|+.|++||. +++.+..+.+|...|++++|+|+ ++|++
T Consensus 448 ~~v~~w~~~~~~~~~~~~~~~~v~-~~~~spd~~~las~~~d~~i~iw~~-~~~~~~~~~~h~~~v~~l~~s~dg~~l~s 525 (577)
T 2ymu_A 448 KTVKLWNRNGQLLQTLTGHSSSVR-GVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIAS 525 (577)
T ss_dssp SEEEEEETTSCEEEEEECCSSCEE-EEEECTTSCEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSSCEEE
T ss_pred CEEEEEECCCCEEEEEcCCCCCEE-EEEEcCCCCEEEEEeCCCEEEEEcC-CCCEEEEEeCCCCCEEEEEEcCCCCEEEE
Confidence 999999986553 44555555544 5689999999999999999999995 58888899999999999999999 99999
Q ss_pred EeCCCcEEEEeCCCCceEEEeeccCCCCcEEEEEccCCCCeEEeeecc
Q 022324 250 GSSLGSIAISGLSSDQRVATLRSTDCTGHIICLMYPQFLHMLFFLCFL 297 (299)
Q Consensus 250 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~s~s~~ 297 (299)
++.||.|++||. +++++.++.+|.. +|++++|+|||++|++++.-
T Consensus 526 ~~~dg~v~lwd~-~~~~~~~~~~h~~--~v~~~~fs~dg~~l~s~~~D 570 (577)
T 2ymu_A 526 ASDDKTVKLWNR-NGQLLQTLTGHSS--SVWGVAFSPDGQTIASASSD 570 (577)
T ss_dssp EETTSEEEEECT-TSCEEEEEECCSS--CEEEEEECTTSSCEEEEETT
T ss_pred EECcCEEEEEeC-CCCEEEEEcCCCC--CEEEEEEcCCCCEEEEEeCC
Confidence 999999999996 6899999999988 99999999999999999854
No 26
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.97 E-value=9e-32 Score=223.59 Aligned_cols=261 Identities=15% Similarity=0.119 Sum_probs=186.6
Q ss_pred CCCCCCCcchhccCcHHHHH--HHhhc-cC-ccchhhHHHhhhhHHHHhhhhhHHHHHHhhhcCCCCCCCchhhhhhhhh
Q 022324 14 KKRSSKPRATIESLNGDIIC--MIFSS-LG-FFDLVRCSAVCKSWNAIINRCKLLQLLYCKLHGFSNTSGSSMRLHLEEL 89 (299)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~--~i~~~-~~-h~~~v~~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~d~~~~~~~~~~ 89 (299)
..+.+..+.++++|+.+... .+..+ .+ |.+.|.+++|+|+++++++ ...|+++++|..
T Consensus 26 ~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las----------------~s~D~~v~iw~~-- 87 (330)
T 2hes_X 26 ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAA----------------GSFDSTVSIWAK-- 87 (330)
T ss_dssp EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEE----------------EETTSCEEEEEC--
T ss_pred EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEE----------------EeCCCcEEEEEc--
Confidence 44555677888999876431 12223 34 9999999999999998887 336778888832
Q ss_pred hhccccceeecCceeeEEeeccccCeeEEEe-cCC-EEEEEeCCCcEEEEecCC----ceeEEEecCCCcee-EEEEecC
Q 022324 90 AMKHHRFALEEGRIDIDQWKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEG----YKCVEEYSLPNAAS-LVDFDFD 162 (299)
Q Consensus 90 ~~~~~~~~l~~g~~~~~~~~~h~~~i~~~~~-~~~-~l~s~~~dg~i~iwd~~~----~~~~~~~~~~~~~~-~~~~~~~ 162 (299)
...... ......+..+.+|.+.|.++.| |++ +|++|+.|++|++||+.. .+++..+..|...+ .++|+|+
T Consensus 88 ~~~~~~---~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~ 164 (330)
T 2hes_X 88 EESADR---TFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPS 164 (330)
T ss_dssp ----------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSS
T ss_pred ccCcCc---cccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCC
Confidence 211100 0011235677899999999999 666 999999999999999942 35677788776555 5999999
Q ss_pred CCEEE-EEcCCeEEEEecCCce----eeeeccCCccceeeeeccC--CCeEEEecCCCcEEEEEcCCc--------ceee
Q 022324 163 ESKIV-GLIGTRICIWRRNGLR----SVFPSREGTFMKGLCMRYF--DPEAVVGCEDGTARVFDMYSR--------KCSQ 227 (299)
Q Consensus 163 ~~~l~-~~~d~~i~v~d~~~~~----~~~~~~~~~~~~~~~~~~~--~~~l~s~~~d~~i~iwd~~~~--------~~~~ 227 (299)
+.+|+ ++.|+.|++||..+.. ..+..|.+.+. .++++++ +..+++|+.|+.|++||++.+ ....
T Consensus 165 ~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~-~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~ 243 (330)
T 2hes_X 165 EALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVW-SSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEA 243 (330)
T ss_dssp SSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEE-EEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEE
T ss_pred CCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEE-EEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEEee
Confidence 99999 9999999999987652 34455555543 4577777 456999999999999999764 3344
Q ss_pred eccc-cCCceeEEEeCCCCeEEEEeCCCcEEEEeCCCCc--eEEEe-eccCCCCcEEEEEccC--CCCeEEeeecc
Q 022324 228 IIRM-HCAPVTSLSLSEDQLIISGSSLGSIAISGLSSDQ--RVATL-RSTDCTGHIICLMYPQ--FLHMLFFLCFL 297 (299)
Q Consensus 228 ~~~~-~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~--~~~~~-~~~~~~~~i~~~~~s~--~g~~l~s~s~~ 297 (299)
.+.. |...|.+++|+++.+|++++.||.|++||..+++ .+... ..|... .|.+++|+| ++++|++||.-
T Consensus 244 ~~~~~h~~~v~~v~~s~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~-~v~~v~~~~~~~~~~las~s~D 318 (330)
T 2hes_X 244 ILPDVHKRQVYNVAWGFNGLIASVGADGVLAVYEEVDGEWKVFAKRALCHGVY-EINVVKWLELNGKTILATGGDD 318 (330)
T ss_dssp ECCSCCSSCEEEEEECTTSCEEEEETTSCEEEEEEETTEEEEEEEESCTTTTS-CEEEEEEC-----CCEEEEETT
T ss_pred ecccccccceEEEEEcCCCEEEEEeCCCEEEEEEcCCCceEEEeccccccccc-eEEEEEEecCCCceEEEEecCC
Confidence 4444 8899999999987889999999999999998774 33333 344432 699999999 78999999864
No 27
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.97 E-value=3.5e-29 Score=215.63 Aligned_cols=271 Identities=18% Similarity=0.248 Sum_probs=209.0
Q ss_pred cchhccCcHH----HHHHHhhccCccchhhHHHhhhhHHHHhhhhhHHHHHHhhhc-C-----------------C-CCC
Q 022324 21 RATIESLNGD----IICMIFSSLGFFDLVRCSAVCKSWNAIINRCKLLQLLYCKLH-G-----------------F-SNT 77 (299)
Q Consensus 21 ~~~~~~~~~~----~~~~i~~~~~h~~~v~~~~~~~~~~~l~~~~~~w~~~~~~~~-~-----------------~-~~~ 77 (299)
.+.+..||.| +..+|+++|+..++.+|..+|+.|+.++.+..+|+.+|.+.. . . ..+
T Consensus 8 ~d~~~~lp~e~~~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~ 87 (435)
T 1p22_A 8 RDFITALPARGLDHIAENILSYLDAKSLCAAELVCKEWYRVTSDGMLWKKLIERMVRTDSLWRGLAERRGWGQYLFKNKP 87 (435)
T ss_dssp CCHHHHTGGGTCHHHHHHHHTTCCHHHHHHHHHHCHHHHHHHHHTTHHHHHHHHHHTSCHHHHHHHHSSSGGGGCC----
T ss_pred cChHHHCCcchHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcChHHHHHHHHhhcCcchhhhhhhhccchhhhhhccCC
Confidence 4678889999 999999999999999999999999999998899999876542 0 0 000
Q ss_pred ------CCchhhhhhhhh--------------------------------hhccccceeecCcee-------------eE
Q 022324 78 ------SGSSMRLHLEEL--------------------------------AMKHHRFALEEGRID-------------ID 106 (299)
Q Consensus 78 ------~d~~~~~~~~~~--------------------------------~~~~~~~~l~~g~~~-------------~~ 106 (299)
.....+.....+ .+..++..++.|..+ +.
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~g~~dg~i~iwd~~~~~~~~ 167 (435)
T 1p22_A 88 PDGNAPPNSFYRALYPKIIQDIETIESNWRCGRHSLQRIHCRSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKNTLECKR 167 (435)
T ss_dssp -----CCSHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCEECCCSSCCCEEEEECCSSEEEEEESSSCEEEEESSSCCEEE
T ss_pred CCCCCCchhhHHhhhhhhhcchhHHHhhhccCCccceEEecccCCCCcEEEEEECCCEEEEEeCCCeEEEEeCCCCeEEE
Confidence 001111111000 001112223332221 45
Q ss_pred EeeccccCeeEEEecCCEEEEEeCCCcEEEEecCCceeEEEecCCCceeE-EEEecCCCEEE-EEcCCeEEEEecCCcee
Q 022324 107 QWKAHSVGVDQCRMKRGLILTGVGDKVMRLWSLEGYKCVEEYSLPNAASL-VDFDFDESKIV-GLIGTRICIWRRNGLRS 184 (299)
Q Consensus 107 ~~~~h~~~i~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~-~~~d~~i~v~d~~~~~~ 184 (299)
.+.+|.+.|.++.+.+++|++|+.||+|++||+.+++.+..+..|...+. ++|+ +..++ ++.|+.|++||+.+...
T Consensus 168 ~~~~h~~~v~~l~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~vwd~~~~~~ 245 (435)
T 1p22_A 168 ILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTD 245 (435)
T ss_dssp EECCCSSCEEEEECCSSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEECC--TTEEEEEETTSCEEEEECSSSSC
T ss_pred EEcCCCCcEEEEEECCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCcEEEEEEc--CCEEEEeeCCCcEEEEeCCCCCC
Confidence 66799999999999666999999999999999999999999988766554 7775 45777 99999999999987642
Q ss_pred e--eeccCCccceeeeeccCCCeEEEecCCCcEEEEEcCCcceeeeccccCCceeEEEeCCCCeEEEEeCCCcEEEEeCC
Q 022324 185 V--FPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSEDQLIISGSSLGSIAISGLS 262 (299)
Q Consensus 185 ~--~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~ 262 (299)
. .....++...+.++.+++..+++|+.|+.|++||+++++.+..+..|...|.++.++ +.++++|+.||.|++||++
T Consensus 246 ~~~~~~~~~~~~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~-~~~l~~g~~dg~i~iwd~~ 324 (435)
T 1p22_A 246 ITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR-DRLVVSGSSDNTIRLWDIE 324 (435)
T ss_dssp CEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEE-TTEEEEEETTSCEEEEETT
T ss_pred ceeeeEecCCCCcEEEEEeCCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEeC-CCEEEEEeCCCeEEEEECC
Confidence 2 122223333355666788899999999999999999999999999999999999994 3689999999999999999
Q ss_pred CCceEEEeeccCCCCcEEEEEccCCCCeEEeeeccc
Q 022324 263 SDQRVATLRSTDCTGHIICLMYPQFLHMLFFLCFLP 298 (299)
Q Consensus 263 ~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~s~s~~~ 298 (299)
+++++.++.+|.. .|.+++| ++.+|++|+..+
T Consensus 325 ~~~~~~~~~~h~~--~v~~~~~--~~~~l~sg~~dg 356 (435)
T 1p22_A 325 CGACLRVLEGHEE--LVRCIRF--DNKRIVSGAYDG 356 (435)
T ss_dssp TCCEEEEECCCSS--CEEEEEC--CSSEEEEEETTS
T ss_pred CCCEEEEEeCCcC--cEEEEEe--cCCEEEEEeCCC
Confidence 9999999999988 8999999 788999998643
No 28
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.97 E-value=1e-31 Score=225.53 Aligned_cols=248 Identities=11% Similarity=0.060 Sum_probs=172.9
Q ss_pred cchhccCcHHHHHHHhhccCccchhhHHHhhhhHHHHhhh----hhHHHHHHhhhcCCCCCCCchhhhhhhhhhhccccc
Q 022324 21 RATIESLNGDIICMIFSSLGFFDLVRCSAVCKSWNAIINR----CKLLQLLYCKLHGFSNTSGSSMRLHLEELAMKHHRF 96 (299)
Q Consensus 21 ~~~~~~~~~~~~~~i~~~~~h~~~v~~~~~~~~~~~l~~~----~~~w~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 96 (299)
......|+.+.. ....|...|++++|+|+|++|++. .++| |..+++| .........
T Consensus 25 ~~~~~~w~~p~~----~p~~H~~~V~~v~fSpDG~~las~s~d~~~~w--------------d~~v~~~--~~~~~~~~~ 84 (357)
T 4g56_B 25 SSKGSAWGRPVT----APACMEVQIGAVRYRRDGALLLAASSLSSRTW--------------GGSIWVF--KDPEGAPNE 84 (357)
T ss_dssp -------------------CCCSEEEEEEECSSSCEEEEEECSSSSSC--------------CEEEEEE--SSCC---CG
T ss_pred CccccccCCCCC----CcccccCCEEEEEECCCCCEEEEEcCCCCccc--------------cCeEEEE--ECCCCCcce
Confidence 344455665432 234799999999999999999971 1112 2333333 111111110
Q ss_pred eeecCceeeEEeeccccCeeEEEe-cCCEEEEEeCCCcEEEEecCCceeEEE----ecCCC-ceeEEEEecCCCEEE-EE
Q 022324 97 ALEEGRIDIDQWKAHSVGVDQCRM-KRGLILTGVGDKVMRLWSLEGYKCVEE----YSLPN-AASLVDFDFDESKIV-GL 169 (299)
Q Consensus 97 ~l~~g~~~~~~~~~h~~~i~~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~~~----~~~~~-~~~~~~~~~~~~~l~-~~ 169 (299)
.......+|...|.+++| +++.+++++.||+|++||+.+++.... ...|. .+..++|+|++++|+ ++
T Consensus 85 ------~~~~~~~~~~~~V~~~~~s~d~~~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs 158 (357)
T 4g56_B 85 ------SLCTAGVQTEAGVTDVAWVSEKGILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGG 158 (357)
T ss_dssp ------GGCSEEEECSSCEEEEEEETTTEEEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEE
T ss_pred ------eEecccCCCCCCEEEEEEcCCCCEEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEe
Confidence 012233579999999999 667888899999999999998875432 22454 455599999999999 99
Q ss_pred cCCeEEEEecCCcee--eeeccCCccceeeeeccCCC-eEEEecCCCcEEEEEcCCcceeeecc--ccCCceeEEEeCCC
Q 022324 170 IGTRICIWRRNGLRS--VFPSREGTFMKGLCMRYFDP-EAVVGCEDGTARVFDMYSRKCSQIIR--MHCAPVTSLSLSED 244 (299)
Q Consensus 170 ~d~~i~v~d~~~~~~--~~~~~~~~~~~~~~~~~~~~-~l~s~~~d~~i~iwd~~~~~~~~~~~--~~~~~i~~~~~~~~ 244 (299)
.|+.|++||+++++. .+..+.+.+. .++++++++ .+++++.|+.|++||+++++....+. .+...+.+++|+|+
T Consensus 159 ~dg~v~iwd~~~~~~~~~~~~h~~~v~-~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~ 237 (357)
T 4g56_B 159 KDFSVKVWDLSQKAVLKSYNAHSSEVN-CVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPE 237 (357)
T ss_dssp TTSCEEEEETTTTEEEEEECCCSSCEE-EEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTT
T ss_pred CCCeEEEEECCCCcEEEEEcCCCCCEE-EEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhc
Confidence 999999999998763 3445555544 457777775 58899999999999999988766554 56778999999987
Q ss_pred --CeEEEEeCCCcEEEEeCCCCceEEEeeccCCCCcEEEEEccCCC-CeEEeeecc
Q 022324 245 --QLIISGSSLGSIAISGLSSDQRVATLRSTDCTGHIICLMYPQFL-HMLFFLCFL 297 (299)
Q Consensus 245 --~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~g-~~l~s~s~~ 297 (299)
.+|++|+.|+.|++||+++++++.++..+.. .|++++|+|++ ++|++|+.-
T Consensus 238 ~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~--~v~~l~~sp~~~~~lasgs~D 291 (357)
T 4g56_B 238 KDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQ--NITGLAYSYHSSPFLASISED 291 (357)
T ss_dssp STTEEEEEESSSCEEEEESSCGGGCEEECCCSS--CEEEEEECSSSSCCEEEEETT
T ss_pred ccceEEEeecccceeEEECCCCcEeEEEeccce--eEEEEEEcCCCCCEEEEEeCC
Confidence 6899999999999999999999999999988 99999999987 578888753
No 29
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.97 E-value=4.6e-29 Score=205.48 Aligned_cols=192 Identities=18% Similarity=0.240 Sum_probs=168.1
Q ss_pred eeEEeeccccCeeEEEe-cCC-EEEEEeCCCcEEEEecCCceeEEEecCCCceeE-EEEecCCCEEE-EEcCCeEEEEec
Q 022324 104 DIDQWKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNAASL-VDFDFDESKIV-GLIGTRICIWRR 179 (299)
Q Consensus 104 ~~~~~~~h~~~i~~~~~-~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~-~~~d~~i~v~d~ 179 (299)
...++.+|.++|+++.| +++ +|++|+.||.|++|+..+++....+..|...+. ++|+|++++|+ ++.|+.|++||+
T Consensus 15 ~~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~ 94 (312)
T 4ery_A 15 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDV 94 (312)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred eEEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEEC
Confidence 35677899999999999 666 999999999999999999999999988876555 99999999999 999999999999
Q ss_pred CCce--eeeeccCCccceeeeeccCCCeEEEecCCCcEEEEEcCCcceeeeccccCCceeEEEeCCC-CeEEEEeCCCcE
Q 022324 180 NGLR--SVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGSSLGSI 256 (299)
Q Consensus 180 ~~~~--~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~-~~l~~~~~dg~i 256 (299)
++.+ ..+..+...+. .+++++++..+++++.|+.|++||+++++.+..+..|..+|.+++|+|+ ++|++++.||.|
T Consensus 95 ~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i 173 (312)
T 4ery_A 95 SSGKCLKTLKGHSNYVF-CCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLC 173 (312)
T ss_dssp TTCCEEEEEECCSSCEE-EEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred CCCcEEEEEcCCCCCEE-EEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcE
Confidence 8875 34455555443 4688999999999999999999999999999999899999999999999 999999999999
Q ss_pred EEEeCCCCceEEEeeccCCCCcEEEEEccCCCCeEEeeecc
Q 022324 257 AISGLSSDQRVATLRSTDCTGHIICLMYPQFLHMLFFLCFL 297 (299)
Q Consensus 257 ~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~s~s~~ 297 (299)
++||+++++.+..+..+... ++..++|+|++++|++++.-
T Consensus 174 ~~wd~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~d 213 (312)
T 4ery_A 174 RIWDTASGQCLKTLIDDDNP-PVSFVKFSPNGKYILAATLD 213 (312)
T ss_dssp EEEETTTCCEEEEECCSSCC-CEEEEEECTTSSEEEEEETT
T ss_pred EEEECCCCceeeEEeccCCC-ceEEEEECCCCCEEEEEcCC
Confidence 99999999988887654433 89999999999999998853
No 30
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.97 E-value=6.4e-29 Score=214.58 Aligned_cols=266 Identities=16% Similarity=0.237 Sum_probs=211.5
Q ss_pred CcchhccCcHHHHHHHhhccCccchhhHHHhhhhHHHHhhhhhHHHHHHhhhc-CCCCC-----------CCchhhhhhh
Q 022324 20 PRATIESLNGDIICMIFSSLGFFDLVRCSAVCKSWNAIINRCKLLQLLYCKLH-GFSNT-----------SGSSMRLHLE 87 (299)
Q Consensus 20 ~~~~~~~~~~~~~~~i~~~~~h~~~v~~~~~~~~~~~l~~~~~~w~~~~~~~~-~~~~~-----------~d~~~~~~~~ 87 (299)
..+.+..||.|+...|+++++..+++++..+|+.|+.++.+..+|+.++.+.. ..... ....++..+.
T Consensus 15 ~~d~~~~lp~e~~~~i~~~l~~~~l~~~~~v~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wk~~~~ 94 (445)
T 2ovr_B 15 QRDFISLLPKELALYVLSFLEPKDLLQAAQTCRYWRILAEDNLLWREKCKEEGIDEPLHIKRRKVIKPGFIHSPWKSAYI 94 (445)
T ss_dssp CCSTTTSSCHHHHHHHHTTSCHHHHHHHTTSCHHHHHHHTCSHHHHHHHTTTTCCSCCCCCC--CCSSCCCCCHHHHHHH
T ss_pred cCChhHHCCHHHHHHHHHhCCHHHHHHHHHHhHHHHhhcCchhHhhhheeecccccccccccceecCCCccCCcHHHHHh
Confidence 45678899999999999999999999999999999999998889999886543 11000 1122222111
Q ss_pred hhhhccccceeecCce-eeEEeeccccCe-eEEEecCCEEEEEeCCCcEEEEecCCceeEEEecCCCceeE-EEEecCCC
Q 022324 88 ELAMKHHRFALEEGRI-DIDQWKAHSVGV-DQCRMKRGLILTGVGDKVMRLWSLEGYKCVEEYSLPNAASL-VDFDFDES 164 (299)
Q Consensus 88 ~~~~~~~~~~l~~g~~-~~~~~~~h~~~i-~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~~~~ 164 (299)
........+..+.. ..+.+.+|.+.| .++.+.+++|++|+.||+|++||+.+++.+..+..|...+. ++++ ++
T Consensus 95 --~~~~~~~~w~~~~~~~~~~l~~h~~~v~~~~~~~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~ 170 (445)
T 2ovr_B 95 --RQHRIDTNWRRGELKSPKVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR--DN 170 (445)
T ss_dssp --HHHHHHHHHHHSCCCCCEEEECSTTSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEE--TT
T ss_pred --hhhhhhhcccCCCcceeEEecccCCCcEEEEEEcCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCEEEEEec--CC
Confidence 11112234444544 367789999875 56666766999999999999999999999999998876554 8886 56
Q ss_pred EEE-EEcCCeEEEEecCCceee--eeccCCccceeeeeccCCCeEEEecCCCcEEEEEcCCcceeeeccccCCceeEEEe
Q 022324 165 KIV-GLIGTRICIWRRNGLRSV--FPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSL 241 (299)
Q Consensus 165 ~l~-~~~d~~i~v~d~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~~~~ 241 (299)
.++ ++.||.|++||+.+++.. +..+.. .+.++.+.+..+++|+.|+.|++||+++++.+..+..|...|.++++
T Consensus 171 ~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~---~v~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~ 247 (445)
T 2ovr_B 171 IIISGSTDRTLKVWNAETGECIHTLYGHTS---TVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY 247 (445)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECCCSS---CEEEEEEETTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE
T ss_pred EEEEEeCCCeEEEEECCcCcEEEEECCCCC---cEEEEEecCCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE
Confidence 777 999999999999987633 333333 35566777888999999999999999999999999999999999999
Q ss_pred CCCCeEEEEeCCCcEEEEeCCCCceEEEeeccCCCCcEEEEEccCCCCeEEeeecc
Q 022324 242 SEDQLIISGSSLGSIAISGLSSDQRVATLRSTDCTGHIICLMYPQFLHMLFFLCFL 297 (299)
Q Consensus 242 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~s~s~~ 297 (299)
.++++++|+.||.|++||+++++++.++..|.. .|.+++| ++.++++|+.-
T Consensus 248 -~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~--~v~~~~~--~~~~l~~~~~d 298 (445)
T 2ovr_B 248 -DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTN--RVYSLQF--DGIHVVSGSLD 298 (445)
T ss_dssp -CSSCEEEEETTSCEEEEEGGGTEEEEEECCCSS--CEEEEEE--CSSEEEEEETT
T ss_pred -CCCEEEEEcCCCEEEEEECCCCcEeEEecCCCC--ceEEEEE--CCCEEEEEeCC
Confidence 337899999999999999999999999998887 8999999 88899998754
No 31
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.97 E-value=8.1e-32 Score=227.57 Aligned_cols=226 Identities=13% Similarity=0.069 Sum_probs=177.3
Q ss_pred CccchhhHHHhhhhHHHHhhhhhHHHHHHhhhcCCCCCCCchhhhhhhhhhhccccceeecCc-eeeEEeeccccCeeEE
Q 022324 40 GFFDLVRCSAVCKSWNAIINRCKLLQLLYCKLHGFSNTSGSSMRLHLEELAMKHHRFALEEGR-IDIDQWKAHSVGVDQC 118 (299)
Q Consensus 40 ~h~~~v~~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~g~-~~~~~~~~h~~~i~~~ 118 (299)
.|.+.|+|++|+|+++++++ ...|+.+++|.. . .+. ..+..+.+|.+.|.++
T Consensus 9 ~~~~~v~~~~~s~~g~~l~~----------------~~~d~~i~iw~~--~---------~~~~~~~~~~~~h~~~v~~~ 61 (377)
T 3dwl_C 9 ILPKPSYEHAFNSQRTEFVT----------------TTATNQVELYEQ--D---------GNGWKHARTFSDHDKIVTCV 61 (377)
T ss_dssp ECSSCCSCCEECSSSSEEEC----------------CCSSSCBCEEEE--E---------TTEEEECCCBCCCSSCEEEE
T ss_pred cCCCcEEEEEECCCCCEEEE----------------ecCCCEEEEEEc--c---------CCceEEEEEEecCCceEEEE
Confidence 35678999999999999987 335777888832 2 111 3355668999999999
Q ss_pred Ee-cCC-EEEEEeCCCcEEEEecCCce---eEEEecCCCcee-EEEEecCCCEEE-EEcCCeEEEEecCCce-----eee
Q 022324 119 RM-KRG-LILTGVGDKVMRLWSLEGYK---CVEEYSLPNAAS-LVDFDFDESKIV-GLIGTRICIWRRNGLR-----SVF 186 (299)
Q Consensus 119 ~~-~~~-~l~s~~~dg~i~iwd~~~~~---~~~~~~~~~~~~-~~~~~~~~~~l~-~~~d~~i~v~d~~~~~-----~~~ 186 (299)
.| +++ +|++++.|++|++||+.+++ ....+..|...+ .++|+|+++.|+ ++.|+.|++||+++.. ..+
T Consensus 62 ~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~ 141 (377)
T 3dwl_C 62 DWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHL 141 (377)
T ss_dssp EECTTTCCEEEEETTSSEEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEE
T ss_pred EEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEe
Confidence 99 555 99999999999999999877 566666665544 599999999988 9999999999998764 233
Q ss_pred ec-cCCccceeeeeccCCCeEEEecCCCcEEEEEcC------------------CcceeeeccccCCceeEEEeCCC-Ce
Q 022324 187 PS-REGTFMKGLCMRYFDPEAVVGCEDGTARVFDMY------------------SRKCSQIIRMHCAPVTSLSLSED-QL 246 (299)
Q Consensus 187 ~~-~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~------------------~~~~~~~~~~~~~~i~~~~~~~~-~~ 246 (299)
.. +...+. .+++++++..+++++.|+.|++||++ .++.+..+ .|...|.+++|+|+ ++
T Consensus 142 ~~~h~~~v~-~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~ 219 (377)
T 3dwl_C 142 KRPLRSTIL-SLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNA 219 (377)
T ss_dssp CSSCCSCEE-EEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSC
T ss_pred ecccCCCeE-EEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCE
Confidence 33 444433 56889999999999999999999985 35566677 89999999999999 99
Q ss_pred EEEEeCCCcEEEEeCCCCce----EEEeeccCCCCcEEEEEccCCCCeEEeeec
Q 022324 247 IISGSSLGSIAISGLSSDQR----VATLRSTDCTGHIICLMYPQFLHMLFFLCF 296 (299)
Q Consensus 247 l~~~~~dg~i~iwd~~~~~~----~~~~~~~~~~~~i~~~~~s~~g~~l~s~s~ 296 (299)
|++++.||.|++||+++++. +..+..|.. +|.+++|+|+|++|++|+.
T Consensus 220 l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~--~v~~~~~s~~~~~l~~~~~ 271 (377)
T 3dwl_C 220 LAYAGHDSSVTIAYPSAPEQPPRALITVKLSQL--PLRSLLWANESAIVAAGYN 271 (377)
T ss_dssp EEEEETTTEEC-CEECSTTSCEEECCCEECSSS--CEEEEEEEETTEEEEEESS
T ss_pred EEEEeCCCcEEEEECCCCCCcceeeEeecCCCC--ceEEEEEcCCCCEEEEEcC
Confidence 99999999999999999987 788888887 8999999999999999874
No 32
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.97 E-value=3.6e-29 Score=209.90 Aligned_cols=191 Identities=15% Similarity=0.118 Sum_probs=167.7
Q ss_pred eeEEeeccccCeeEEEe-cCC-EEEEEeCCCcEEEEecCCceeEEEecCCCc-eeEEEEecCCCEEE-EEcCCeEEEEec
Q 022324 104 DIDQWKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNA-ASLVDFDFDESKIV-GLIGTRICIWRR 179 (299)
Q Consensus 104 ~~~~~~~h~~~i~~~~~-~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~-~~~d~~i~v~d~ 179 (299)
..+++++|.+.|+++.| +++ +|+||+.||+|++||..+++....+..+.. +..++|+|++..++ ++.|+.+++|++
T Consensus 56 ~~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~ 135 (354)
T 2pbi_B 56 TRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPL 135 (354)
T ss_dssp EEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEEC
T ss_pred EEEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEE
Confidence 36778999999999999 666 999999999999999999998888887654 44599999999999 999999999998
Q ss_pred CCce--------eeeeccCCccceeeeeccCCCeEEEecCCCcEEEEEcCCcceeeeccccCCceeEEEeCCC---CeEE
Q 022324 180 NGLR--------SVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED---QLII 248 (299)
Q Consensus 180 ~~~~--------~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~---~~l~ 248 (299)
.... ..+..|.+.+. .++|++++..+++++.|+.|++||+++++.+..+.+|...|.+++++|+ .+|+
T Consensus 136 ~~~~~~~~~~~~~~~~~h~~~v~-~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~ 214 (354)
T 2pbi_B 136 TFDKNENMAAKKKSVAMHTNYLS-ACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFV 214 (354)
T ss_dssp CCCTTCCSGGGCEEEEECSSCEE-EEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEE
T ss_pred eccccccccccceeeeccCCcEE-EEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEE
Confidence 6431 33444555444 4588888989999999999999999999999999999999999999873 6999
Q ss_pred EEeCCCcEEEEeCCCCceEEEeeccCCCCcEEEEEccCCCCeEEeeecc
Q 022324 249 SGSSLGSIAISGLSSDQRVATLRSTDCTGHIICLMYPQFLHMLFFLCFL 297 (299)
Q Consensus 249 ~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~s~s~~ 297 (299)
+|+.||.|++||+++++++..+..|.. .|++++|+|++.+|++|+.-
T Consensus 215 sgs~Dg~v~~wd~~~~~~~~~~~~h~~--~v~~v~~~p~~~~l~s~s~D 261 (354)
T 2pbi_B 215 SGGCDKKAMVWDMRSGQCVQAFETHES--DVNSVRYYPSGDAFASGSDD 261 (354)
T ss_dssp EEETTSCEEEEETTTCCEEEEECCCSS--CEEEEEECTTSSEEEEEETT
T ss_pred EEeCCCeEEEEECCCCcEEEEecCCCC--CeEEEEEeCCCCEEEEEeCC
Confidence 999999999999999999999999988 99999999999999999864
No 33
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.97 E-value=8.5e-31 Score=219.87 Aligned_cols=244 Identities=12% Similarity=0.132 Sum_probs=189.6
Q ss_pred cCcHHHHHHHhhccCccchhhHHHhhhh---HHHHhhhhhHHHHHHhhhcCCCCCCCchhhhhhhhhhhccccceeecCc
Q 022324 26 SLNGDIICMIFSSLGFFDLVRCSAVCKS---WNAIINRCKLLQLLYCKLHGFSNTSGSSMRLHLEELAMKHHRFALEEGR 102 (299)
Q Consensus 26 ~~~~~~~~~i~~~~~h~~~v~~~~~~~~---~~~l~~~~~~w~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~g~ 102 (299)
.++......+..+.+|.+.|+|++|+|+ ++++++ ...|+.+++|.. .. .+.
T Consensus 23 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~----------------~~~dg~i~iw~~--~~--------~~~ 76 (368)
T 3mmy_A 23 TDNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIA----------------GSWANDVRCWEV--QD--------SGQ 76 (368)
T ss_dssp CCSSCTTCCEECSSCCSSCEEEEEECCTTSSSEEEEE----------------EETTSEEEEEEE--CT--------TSC
T ss_pred cCCCCCcceeEeccCCCCceEEEEEcCCCCCceEEEE----------------ECCCCcEEEEEc--CC--------CCc
Confidence 3444444455566799999999999999 588886 235677888833 11 022
Q ss_pred eeeEEeeccccCeeEEEe-cCC-EEEEEeCCCcEEEEecCCceeEEEecCCCceeEEEE--ecCCCEEE-EEcCCeEEEE
Q 022324 103 IDIDQWKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNAASLVDF--DFDESKIV-GLIGTRICIW 177 (299)
Q Consensus 103 ~~~~~~~~h~~~i~~~~~-~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~-~~~d~~i~v~ 177 (299)
.....+.+|.+.|.++.| +++ +|++++.||.|++||+.+++.+........+..++| ++++++++ ++.|+.|++|
T Consensus 77 ~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vw 156 (368)
T 3mmy_A 77 TIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFW 156 (368)
T ss_dssp EEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEE
T ss_pred eeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCceeeccccCceEEEEEEeCCCCCEEEEccCCCcEEEE
Confidence 234667899999999999 565 999999999999999999998886666666667999 88888888 9999999999
Q ss_pred ecCCceee--eeccC----------------------------------------CccceeeeeccCCCe----EEEecC
Q 022324 178 RRNGLRSV--FPSRE----------------------------------------GTFMKGLCMRYFDPE----AVVGCE 211 (299)
Q Consensus 178 d~~~~~~~--~~~~~----------------------------------------~~~~~~~~~~~~~~~----l~s~~~ 211 (299)
|+++.+.. +..+. .....++++.+.... +++++.
T Consensus 157 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (368)
T 3mmy_A 157 DTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSI 236 (368)
T ss_dssp CSSCSSCSEEEECSSCEEEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEET
T ss_pred ECCCCcEEEEEecCCCceEEEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecC
Confidence 99875421 11111 011123334444333 899999
Q ss_pred CCcEEEEEcCCc---ceeeeccccCC------------ceeEEEeCCC-CeEEEEeCCCcEEEEeCCCCceEEEeeccCC
Q 022324 212 DGTARVFDMYSR---KCSQIIRMHCA------------PVTSLSLSED-QLIISGSSLGSIAISGLSSDQRVATLRSTDC 275 (299)
Q Consensus 212 d~~i~iwd~~~~---~~~~~~~~~~~------------~i~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~ 275 (299)
|+.|++||++.. +.+..+..|.. +|++++|+|+ ++|++++.||.|++||+++++++..+..|..
T Consensus 237 dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~ 316 (368)
T 3mmy_A 237 EGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQ 316 (368)
T ss_dssp TSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSS
T ss_pred CCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecCCCC
Confidence 999999999976 45566666665 7999999999 8999999999999999999999999998887
Q ss_pred CCcEEEEEccCCCCeEEeeecc
Q 022324 276 TGHIICLMYPQFLHMLFFLCFL 297 (299)
Q Consensus 276 ~~~i~~~~~s~~g~~l~s~s~~ 297 (299)
+|++++|+|+|++|++|+..
T Consensus 317 --~v~~~~~s~~g~~l~~~s~d 336 (368)
T 3mmy_A 317 --PISACCFNHNGNIFAYASSY 336 (368)
T ss_dssp --CEEEEEECTTSSCEEEEECC
T ss_pred --CceEEEECCCCCeEEEEecc
Confidence 99999999999999999854
No 34
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.97 E-value=7.3e-29 Score=205.09 Aligned_cols=189 Identities=15% Similarity=0.129 Sum_probs=163.5
Q ss_pred eEEeeccccCeeEEEe-cCC--EEEEEeCCCcEEEEecCC-----ceeEEEecCCCceeE-EEEecCCCEEE-EEcCCeE
Q 022324 105 IDQWKAHSVGVDQCRM-KRG--LILTGVGDKVMRLWSLEG-----YKCVEEYSLPNAASL-VDFDFDESKIV-GLIGTRI 174 (299)
Q Consensus 105 ~~~~~~h~~~i~~~~~-~~~--~l~s~~~dg~i~iwd~~~-----~~~~~~~~~~~~~~~-~~~~~~~~~l~-~~~d~~i 174 (299)
..++.+|.+.|++++| +++ +|++|+.|++|++|++.. +.++..+.+|...+. ++|+|++++++ ++.|++|
T Consensus 10 ~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v 89 (319)
T 3frx_A 10 RGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTL 89 (319)
T ss_dssp EEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred EEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEE
Confidence 4577999999999999 433 999999999999999864 345678888876665 99999999999 9999999
Q ss_pred EEEecCCce--eeeeccCCccceeeeeccCCCeEEEecCCCcEEEEEcCCcceeeeccccCCceeEEEeCCC-------C
Q 022324 175 CIWRRNGLR--SVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-------Q 245 (299)
Q Consensus 175 ~v~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~-------~ 245 (299)
++||+.+++ ..+..|.+.+. .+++++++..+++|+.|+.|++||++ ++.+..+.+|...|.++.+.|. .
T Consensus 90 ~~wd~~~~~~~~~~~~h~~~v~-~~~~~~~~~~l~s~s~D~~i~vwd~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~ 167 (319)
T 3frx_A 90 RLWDVATGETYQRFVGHKSDVM-SVDIDKKASMIISGSRDKTIKVWTIK-GQCLATLLGHNDWVSQVRVVPNEKADDDSV 167 (319)
T ss_dssp EEEETTTTEEEEEEECCSSCEE-EEEECTTSCEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEEEECCC------CC
T ss_pred EEEECCCCCeeEEEccCCCcEE-EEEEcCCCCEEEEEeCCCeEEEEECC-CCeEEEEeccCCcEEEEEEccCCCCCCCcc
Confidence 999999876 34556666554 45888999999999999999999997 5667777899999999999984 3
Q ss_pred eEEEEeCCCcEEEEeCCCCceEEEeeccCCCCcEEEEEccCCCCeEEeeecc
Q 022324 246 LIISGSSLGSIAISGLSSDQRVATLRSTDCTGHIICLMYPQFLHMLFFLCFL 297 (299)
Q Consensus 246 ~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~s~s~~ 297 (299)
.+++++.|+.|++||+++++....+.+|.. .|.+++|+|+|++|++|+.-
T Consensus 168 ~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~--~v~~~~~sp~g~~l~s~~~d 217 (319)
T 3frx_A 168 TIISAGNDKMVKAWNLNQFQIEADFIGHNS--NINTLTASPDGTLIASAGKD 217 (319)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECCCCS--CEEEEEECTTSSEEEEEETT
T ss_pred EEEEEeCCCEEEEEECCcchhheeecCCCC--cEEEEEEcCCCCEEEEEeCC
Confidence 899999999999999999999999999988 99999999999999999854
No 35
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.97 E-value=3.4e-31 Score=221.26 Aligned_cols=253 Identities=14% Similarity=0.095 Sum_probs=191.1
Q ss_pred CCCCCCCCCCcchhccCcHHHH-------HHHhhccCccchhhHHHhhhhHHHHhhhhhHHHHHHhhhcCCCCCCCchhh
Q 022324 11 PPPKKRSSKPRATIESLNGDII-------CMIFSSLGFFDLVRCSAVCKSWNAIINRCKLLQLLYCKLHGFSNTSGSSMR 83 (299)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~-------~~i~~~~~h~~~v~~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~d~~~~ 83 (299)
+.+....++.+.++++|+.... .....+.+|.+.|.+++|+|++.++++ ...|++++
T Consensus 38 d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s----------------~s~D~~v~ 101 (343)
T 2xzm_R 38 DSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAIS----------------SSWDKTLR 101 (343)
T ss_dssp CCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEE----------------EETTSEEE
T ss_pred CCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEE----------------EcCCCcEE
Confidence 4556677778899999987532 233456799999999999999998887 33678888
Q ss_pred hhhhhhhhccccceeecCceeeEEeeccccCeeEEEe-cCC-EEEEEeCCCcEEEEecCCceeEEEec---CCC-ceeEE
Q 022324 84 LHLEELAMKHHRFALEEGRIDIDQWKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEYS---LPN-AASLV 157 (299)
Q Consensus 84 ~~~~~~~~~~~~~~l~~g~~~~~~~~~h~~~i~~~~~-~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~---~~~-~~~~~ 157 (299)
+|. +... ..+..+.+|...|.++.| +++ +|++++.|++|++||+.... ..... .|. .+..+
T Consensus 102 lwd--~~~~----------~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~-~~~~~~~~~~~~~v~~~ 168 (343)
T 2xzm_R 102 LWD--LRTG----------TTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGEC-KFSSAEKENHSDWVSCV 168 (343)
T ss_dssp EEE--TTSS----------CEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCE-EEECCTTTSCSSCEEEE
T ss_pred EEE--CCCC----------cEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCc-eeeeecccCCCceeeee
Confidence 983 2221 234567899999999999 666 99999999999999998433 33332 344 34559
Q ss_pred EEecCC----------CEEE-EEcCCeEEEEecCCce-eeeeccCCccceeeeeccCCCeEEEecCCCcEEEEEcCCc-c
Q 022324 158 DFDFDE----------SKIV-GLIGTRICIWRRNGLR-SVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSR-K 224 (299)
Q Consensus 158 ~~~~~~----------~~l~-~~~d~~i~v~d~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~-~ 224 (299)
+|+|++ .+++ ++.|+.|++||..... ..+..|...+. .+++++++.+|++|+.|+.|++||+.+. .
T Consensus 169 ~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~h~~~v~-~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~ 247 (343)
T 2xzm_R 169 RYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTNFQIRYTFKAHESNVN-HLSISPNGKYIATGGKDKKLLIWDILNLTY 247 (343)
T ss_dssp EECCCCCSCSCCCSSCCEEEEEETTSEEEEEETTTEEEEEEECCSSCEE-EEEECTTSSEEEEEETTCEEEEEESSCCSS
T ss_pred eeccccccccccCCCCCEEEEEcCCCEEEEEcCCCceeEEEcCccccce-EEEECCCCCEEEEEcCCCeEEEEECCCCcc
Confidence 999987 5777 9999999999965432 34555665544 5689999999999999999999999543 3
Q ss_pred eeeeccccCCceeEEEeCCC-CeEEEEeCCCcEEEEeCCCCceEE--Eee-----------ccCCCCcEEEEEccCCCCe
Q 022324 225 CSQIIRMHCAPVTSLSLSED-QLIISGSSLGSIAISGLSSDQRVA--TLR-----------STDCTGHIICLMYPQFLHM 290 (299)
Q Consensus 225 ~~~~~~~~~~~i~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~--~~~-----------~~~~~~~i~~~~~s~~g~~ 290 (299)
....+ .+...|.+++|+|+ .+++ ++.|+.|++||+.+++... .+. +|.. .|.+++|+|+|++
T Consensus 248 ~~~~~-~~~~~v~~v~~sp~~~~la-~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~v~~~~~sp~g~~ 323 (343)
T 2xzm_R 248 PQREF-DAGSTINQIAFNPKLQWVA-VGTDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNP--QCTSLAWNALGKK 323 (343)
T ss_dssp CSEEE-ECSSCEEEEEECSSSCEEE-EEESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCC--CEEEEEECSSSCC
T ss_pred cceee-cCCCcEEEEEECCCCCEEE-EECCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCC--ceEEEEECCCCCe
Confidence 33444 45667999999999 6665 5568889999998876543 443 3444 7999999999999
Q ss_pred EEeeecc
Q 022324 291 LFFLCFL 297 (299)
Q Consensus 291 l~s~s~~ 297 (299)
|++|+.-
T Consensus 324 l~sg~~D 330 (343)
T 2xzm_R 324 LFAGFTD 330 (343)
T ss_dssp EEEEETT
T ss_pred EEEecCC
Confidence 9999854
No 36
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.97 E-value=6.8e-30 Score=232.41 Aligned_cols=233 Identities=20% Similarity=0.239 Sum_probs=188.0
Q ss_pred ccCccchhhHHHhhhhH-HHHhhhhhHHHHHHhhhcCCCCCCCchhhhhhhhhhhccccceeecCceeeEEeeccccCee
Q 022324 38 SLGFFDLVRCSAVCKSW-NAIINRCKLLQLLYCKLHGFSNTSGSSMRLHLEELAMKHHRFALEEGRIDIDQWKAHSVGVD 116 (299)
Q Consensus 38 ~~~h~~~v~~~~~~~~~-~~l~~~~~~w~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~h~~~i~ 116 (299)
+.+|.+.|+|++++++. +.|++ ...|+++++|. +...... -....+.+.+|...|.
T Consensus 378 l~~H~~~V~~v~~~~~~~~~l~s----------------~s~D~~i~~W~--~~~~~~~-----~~~~~~~~~~h~~~v~ 434 (694)
T 3dm0_A 378 MRAHTDMVTAIATPIDNADIIVS----------------ASRDKSIILWK--LTKDDKA-----YGVAQRRLTGHSHFVE 434 (694)
T ss_dssp EECCSSCEEEEECCTTCCSEEEE----------------EETTSEEEEEE--CCCSTTC-----SCEEEEEEECCSSCEE
T ss_pred cccCCceeEEEEecCCCCCEEEE----------------EeCCCcEEEEE--ccCCCcc-----cccccceecCCCCcEE
Confidence 44899999999999875 56665 33678888883 2221110 1123456789999999
Q ss_pred EEEe-cCC-EEEEEeCCCcEEEEecCCceeEEEecCCCcee-EEEEecCCCEEE-EEcCCeEEEEecCCceee--eeccC
Q 022324 117 QCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNAAS-LVDFDFDESKIV-GLIGTRICIWRRNGLRSV--FPSRE 190 (299)
Q Consensus 117 ~~~~-~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~-~~~d~~i~v~d~~~~~~~--~~~~~ 190 (299)
++.| +++ +|++|+.||+|++||+.+++.+..+..|...+ .++|+|+++.|+ ++.|++|++||....... .....
T Consensus 435 ~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~ 514 (694)
T 3dm0_A 435 DVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGE 514 (694)
T ss_dssp EEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTT
T ss_pred EEEECCCCCEEEEEeCCCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCC
Confidence 9999 566 99999999999999999999999998886655 499999999999 999999999998765322 11112
Q ss_pred Ccc--ceeeeeccCC--CeEEEecCCCcEEEEEcCCcceeeeccccCCceeEEEeCCC-CeEEEEeCCCcEEEEeCCCCc
Q 022324 191 GTF--MKGLCMRYFD--PEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGSSLGSIAISGLSSDQ 265 (299)
Q Consensus 191 ~~~--~~~~~~~~~~--~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~ 265 (299)
++. ...+++++++ ..+++++.|+.|++||+++++....+.+|...|++++|+|+ ++|++|+.||.|++||+++++
T Consensus 515 ~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~ 594 (694)
T 3dm0_A 515 GHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGK 594 (694)
T ss_dssp SCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTE
T ss_pred CCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCc
Confidence 222 2245777765 45999999999999999999999999999999999999999 999999999999999999999
Q ss_pred eEEEeeccCCCCcEEEEEccCCCCeEEeeec
Q 022324 266 RVATLRSTDCTGHIICLMYPQFLHMLFFLCF 296 (299)
Q Consensus 266 ~~~~~~~~~~~~~i~~~~~s~~g~~l~s~s~ 296 (299)
++..+..+. .|.+++|+|++.+|++++.
T Consensus 595 ~~~~~~~~~---~v~~~~~sp~~~~l~~~~~ 622 (694)
T 3dm0_A 595 KLYSLEANS---VIHALCFSPNRYWLCAATE 622 (694)
T ss_dssp EEECCBCSS---CEEEEEECSSSSEEEEEET
T ss_pred eEEEecCCC---cEEEEEEcCCCcEEEEEcC
Confidence 888876554 7999999999999988764
No 37
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.97 E-value=1.7e-30 Score=215.55 Aligned_cols=271 Identities=9% Similarity=0.029 Sum_probs=202.5
Q ss_pred hhccCcHHHHHHHhhccCccchhhHHHhhhhHHHHhh----hhhHHHHHHhhhcCCCCC-CCchhhhhhhhhhhccccce
Q 022324 23 TIESLNGDIICMIFSSLGFFDLVRCSAVCKSWNAIIN----RCKLLQLLYCKLHGFSNT-SGSSMRLHLEELAMKHHRFA 97 (299)
Q Consensus 23 ~~~~~~~~~~~~i~~~~~h~~~v~~~~~~~~~~~l~~----~~~~w~~~~~~~~~~~~~-~d~~~~~~~~~~~~~~~~~~ 97 (299)
.+..|............+|.+.|.+++|+|+++++++ .+.+|+............ ........+.++.++|+++.
T Consensus 32 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 111 (337)
T 1gxr_A 32 ALIGPGIPRHARQINTLNHGEVVCAVTISNPTRHVYTGGKGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCT 111 (337)
T ss_dssp SSSSTTCCSEEEEEEEECCSSCCCEEEECSSSSEEEEECBSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSE
T ss_pred cEeccccCCccccceeccCCCceEEEEEecCCcEEEEcCCCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCE
Confidence 3344443333344456689999999999999999987 456675522211100000 00001112335566666655
Q ss_pred eecCcee---------------eEEeeccccCeeEEEe-cCC-EEEEEeCCCcEEEEecCCceeEEEecCCCcee-EEEE
Q 022324 98 LEEGRID---------------IDQWKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNAAS-LVDF 159 (299)
Q Consensus 98 l~~g~~~---------------~~~~~~h~~~i~~~~~-~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~-~~~~ 159 (299)
+..+..+ ...+.+|...|.++.| +++ ++++++.||.|++||+.+++.+..+..|...+ .++|
T Consensus 112 l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~ 191 (337)
T 1gxr_A 112 LIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDI 191 (337)
T ss_dssp EEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEE
T ss_pred EEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEE
Confidence 5543321 3455788999999999 555 99999999999999999999999998776555 4999
Q ss_pred ecCCCEEE-EEcCCeEEEEecCCceeeeeccCCccceeeeeccCCCeEEEecCCCcEEEEEcCCcceeeeccccCCceeE
Q 022324 160 DFDESKIV-GLIGTRICIWRRNGLRSVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTS 238 (299)
Q Consensus 160 ~~~~~~l~-~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~ 238 (299)
+|+++.++ ++.|+.|++||+++.+.............+++++++..+++++.++.|++||+++++.. .+..|...|.+
T Consensus 192 ~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~-~~~~~~~~v~~ 270 (337)
T 1gxr_A 192 SNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKY-QLHLHESCVLS 270 (337)
T ss_dssp CTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEE-EECCCSSCEEE
T ss_pred CCCCCEEEEEecCCcEEEEECCCCceEeeecCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeE-EEcCCccceeE
Confidence 99999999 99999999999998764333222222335689999999999999999999999987764 45688999999
Q ss_pred EEeCCC-CeEEEEeCCCcEEEEeCCCCceEEEeeccCCCCcEEEEEccCCCCeEEeeecc
Q 022324 239 LSLSED-QLIISGSSLGSIAISGLSSDQRVATLRSTDCTGHIICLMYPQFLHMLFFLCFL 297 (299)
Q Consensus 239 ~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~s~s~~ 297 (299)
++|+|+ ++|++++.||.|++||+.+++.+.... +.. .|.+++|+|++++|++++.-
T Consensus 271 ~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~-~~~--~v~~~~~s~~~~~l~~~~~d 327 (337)
T 1gxr_A 271 LKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSK-ESS--SVLSCDISVDDKYIVTGSGD 327 (337)
T ss_dssp EEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE-CSS--CEEEEEECTTSCEEEEEETT
T ss_pred EEECCCCCEEEEecCCCcEEEEECCCCeEEEEec-CCC--cEEEEEECCCCCEEEEecCC
Confidence 999999 999999999999999999998875554 444 89999999999999998754
No 38
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.97 E-value=4e-29 Score=211.59 Aligned_cols=191 Identities=16% Similarity=0.139 Sum_probs=162.9
Q ss_pred eeEEeeccccCeeEEEe-cCC-EEEEEeCCCcEEEEecCCceeEEEecCCCceeE-EEEecCCCEEE-EEcCCeEEEEec
Q 022324 104 DIDQWKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNAASL-VDFDFDESKIV-GLIGTRICIWRR 179 (299)
Q Consensus 104 ~~~~~~~h~~~i~~~~~-~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~-~~~d~~i~v~d~ 179 (299)
..+++++|.+.|+++.| |++ +|++|+.||+|++||..+++....+..|...+. ++|+|++++++ ++.|+.+++||+
T Consensus 58 ~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~ 137 (380)
T 3iz6_a 58 CCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNL 137 (380)
T ss_dssp EEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEEC
T ss_pred EeecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEEC
Confidence 36788999999999999 666 999999999999999999999999998866554 99999999999 999999999998
Q ss_pred CCce---------eeeeccCCccceeeeeccCCC-eEEEecCCCcEEEEEcCCcceeeec-----cccCCceeEEEeCC-
Q 022324 180 NGLR---------SVFPSREGTFMKGLCMRYFDP-EAVVGCEDGTARVFDMYSRKCSQII-----RMHCAPVTSLSLSE- 243 (299)
Q Consensus 180 ~~~~---------~~~~~~~~~~~~~~~~~~~~~-~l~s~~~d~~i~iwd~~~~~~~~~~-----~~~~~~i~~~~~~~- 243 (299)
.+.. ..+..|.+... .+.+.+.+. .+++|+.|+.|++||+++++.+..+ .+|...|.++++++
T Consensus 138 ~~~~~~~~~~~~~~~~~gh~~~v~-~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 216 (380)
T 3iz6_a 138 SSQADRDGNMPVSRVLTGHKGYAS-SCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSL 216 (380)
T ss_dssp CCCSSCCCSSTTCCBCCCCSSCCC-CCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSS
T ss_pred CCCccccCCccceeeccCCCcceE-EEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecC
Confidence 7532 23445555444 235666544 5999999999999999999888766 47888999999986
Q ss_pred C-CeEEEEeCCCcEEEEeCC-CCceEEEeeccCCCCcEEEEEccCCCCeEEeeecc
Q 022324 244 D-QLIISGSSLGSIAISGLS-SDQRVATLRSTDCTGHIICLMYPQFLHMLFFLCFL 297 (299)
Q Consensus 244 ~-~~l~~~~~dg~i~iwd~~-~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~s~s~~ 297 (299)
+ .+|++|+.|++|++||++ .++.+..+.+|.. .|++++|+|+|++|++||.-
T Consensus 217 ~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~--~v~~v~~~p~~~~l~s~s~D 270 (380)
T 3iz6_a 217 NANMFISGSCDTTVRLWDLRITSRAVRTYHGHEG--DINSVKFFPDGQRFGTGSDD 270 (380)
T ss_dssp SCCEEEEEETTSCEEEEETTTTCCCCEEECCCSS--CCCEEEECTTSSEEEEECSS
T ss_pred CCCEEEEEECCCeEEEEECCCCCcceEEECCcCC--CeEEEEEecCCCeEEEEcCC
Confidence 5 899999999999999998 4578889999988 89999999999999999864
No 39
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.97 E-value=6.2e-30 Score=227.68 Aligned_cols=245 Identities=17% Similarity=0.198 Sum_probs=201.1
Q ss_pred CCCCcchhccCcHHHHHHHhhccCccchhhHHHhhhhHHHHhhhhhHHHHHHhhhcCCCCCCCchhhhhhhhhhhccccc
Q 022324 17 SSKPRATIESLNGDIICMIFSSLGFFDLVRCSAVCKSWNAIINRCKLLQLLYCKLHGFSNTSGSSMRLHLEELAMKHHRF 96 (299)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~i~~~~~h~~~v~~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 96 (299)
.+..+..++.|+.+. ..+..+.+|.+.|.+++++|+++.+++ ...|+.+++|..
T Consensus 279 ~~~~d~~i~~w~~~~-~~~~~~~~h~~~v~~~~~~~~~~~l~t----------------~~~d~~i~~w~~--------- 332 (577)
T 2ymu_A 279 SASDDKTVKLWNRNG-QLLQTLTGHSSSVWGVAFSPDGQTIAS----------------ASDDKTVKLWNR--------- 332 (577)
T ss_dssp EEETTSCEEEEETTS-CEEEEECCCSSCEEEEEECTTSSEEEE----------------EETTSCEEEEET---------
T ss_pred EEeCCCEEEEEeCCC-cEEEEEecCCCCeEEEEECCCCCEEEE----------------EeCCCeEEEEeC---------
Confidence 334566788888542 334456689999999999999998886 235677778732
Q ss_pred eeecCceeeEEeeccccCeeEEEe-cCC-EEEEEeCCCcEEEEecCCceeEEEecCCCcee-EEEEecCCCEEE-EEcCC
Q 022324 97 ALEEGRIDIDQWKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNAAS-LVDFDFDESKIV-GLIGT 172 (299)
Q Consensus 97 ~l~~g~~~~~~~~~h~~~i~~~~~-~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~-~~~d~ 172 (299)
....+..+.+|...|.++.| +++ +|++++.||.|++||. +++.+..+..|...+ .++|+|++++|+ ++.|+
T Consensus 333 ----~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~ 407 (577)
T 2ymu_A 333 ----NGQHLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDK 407 (577)
T ss_dssp ----TSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TCCEEEEEECCSSCEEEEEECTTSSCEEEEETTS
T ss_pred ----CCCeeEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEeCCC
Confidence 12234556899999999999 666 9999999999999995 577888888776555 499999999999 99999
Q ss_pred eEEEEecCCce-eeeeccCCccceeeeeccCCCeEEEecCCCcEEEEEcCCcceeeeccccCCceeEEEeCCC-CeEEEE
Q 022324 173 RICIWRRNGLR-SVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISG 250 (299)
Q Consensus 173 ~i~v~d~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~-~~l~~~ 250 (299)
.|++||..... ..+..+...+. .++++|++..+++++.|+.|++||.. ++.+..+..|...|.+++|+|+ ++|+++
T Consensus 408 ~v~~~~~~~~~~~~~~~~~~~v~-~~~~s~d~~~l~~~~~d~~v~~w~~~-~~~~~~~~~~~~~v~~~~~spd~~~las~ 485 (577)
T 2ymu_A 408 TVKLWNRNGQLLQTLTGHSSSVW-GVAFSPDDQTIASASDDKTVKLWNRN-GQLLQTLTGHSSSVRGVAFSPDGQTIASA 485 (577)
T ss_dssp EEEEECTTCCEEEEEECCSSCEE-EEEECTTSSEEEEEETTSEEEEEETT-SCEEEEEECCSSCEEEEEECTTSCEEEEE
T ss_pred EEEEEeCCCCEEEEecCCCCCeE-EEEECCCCCEEEEEcCCCEEEEEECC-CCEEEEEcCCCCCEEEEEEcCCCCEEEEE
Confidence 99999976543 34455555544 46899999999999999999999964 6778888899999999999999 999999
Q ss_pred eCCCcEEEEeCCCCceEEEeeccCCCCcEEEEEccCCCCeEEeeecc
Q 022324 251 SSLGSIAISGLSSDQRVATLRSTDCTGHIICLMYPQFLHMLFFLCFL 297 (299)
Q Consensus 251 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~s~s~~ 297 (299)
+.|+.|++||. +++++..+.+|.. .|++++|+|+|++|++++..
T Consensus 486 ~~d~~i~iw~~-~~~~~~~~~~h~~--~v~~l~~s~dg~~l~s~~~d 529 (577)
T 2ymu_A 486 SDDKTVKLWNR-NGQLLQTLTGHSS--SVRGVAFSPDGQTIASASDD 529 (577)
T ss_dssp ETTSEEEEEET-TSCEEEEEECCSS--CEEEEEECTTSSCEEEEETT
T ss_pred eCCCEEEEEcC-CCCEEEEEeCCCC--CEEEEEEcCCCCEEEEEECc
Confidence 99999999995 6899999999988 99999999999999999864
No 40
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.97 E-value=9.4e-29 Score=221.71 Aligned_cols=207 Identities=13% Similarity=0.135 Sum_probs=171.5
Q ss_pred hhhhccccceeecCc------------eeeEEeeccccCeeEEEe-cCC-EEEEEeCCCcEEEEecCCce--eEEEecCC
Q 022324 88 ELAMKHHRFALEEGR------------IDIDQWKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYK--CVEEYSLP 151 (299)
Q Consensus 88 ~~~~~~~~~~l~~g~------------~~~~~~~~h~~~i~~~~~-~~~-~l~s~~~dg~i~iwd~~~~~--~~~~~~~~ 151 (299)
.+.++|+++.++.+. ....++.+|.+.|++++| |++ +|++|+.||+|+|||+.+++ ....+..|
T Consensus 23 ~~~~spdg~~l~~~~~~~v~l~~~~~~~~~~~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~ 102 (611)
T 1nr0_A 23 VLGNTPAGDKIQYCNGTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVF 102 (611)
T ss_dssp CCEECTTSSEEEEEETTEEEEEETTCSSCCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECS
T ss_pred EEeeCCCCCEEEeCCCCEEEEecCCCcccCeEecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeEeeccc
Confidence 556677776655432 125677899999999999 666 99999999999999997543 44566666
Q ss_pred Ccee-EEEEecCCCEEE-EEcC----CeEEEEecCCceeeeeccCCccceeeeeccCCCe-EEEecCCCcEEEEEcCCcc
Q 022324 152 NAAS-LVDFDFDESKIV-GLIG----TRICIWRRNGLRSVFPSREGTFMKGLCMRYFDPE-AVVGCEDGTARVFDMYSRK 224 (299)
Q Consensus 152 ~~~~-~~~~~~~~~~l~-~~~d----~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~s~~~d~~i~iwd~~~~~ 224 (299)
...+ .++|+|+++.|+ ++.+ +.|++||.......+..|...+. .++|+|+++. +++|+.|+.|++||..+++
T Consensus 103 ~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~~~~~~~l~gh~~~v~-~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~ 181 (611)
T 1nr0_A 103 SGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMN-SVDFKPSRPFRIISGSDDNTVAIFEGPPFK 181 (611)
T ss_dssp SSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTCCBCBCCCCCSSCEE-EEEECSSSSCEEEEEETTSCEEEEETTTBE
T ss_pred CCceEEEEECCCCCEEEEEECCCCceeEEEEeeCCCCcceecCCCCCce-EEEECCCCCeEEEEEeCCCeEEEEECCCCe
Confidence 5544 599999999998 5544 48999997665566666766555 4588998875 9999999999999999999
Q ss_pred eeeeccccCCceeEEEeCCC-CeEEEEeCCCcEEEEeCCCCceEEEee-------ccCCCCcEEEEEccCCCCeEEeeec
Q 022324 225 CSQIIRMHCAPVTSLSLSED-QLIISGSSLGSIAISGLSSDQRVATLR-------STDCTGHIICLMYPQFLHMLFFLCF 296 (299)
Q Consensus 225 ~~~~~~~~~~~i~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~-------~~~~~~~i~~~~~s~~g~~l~s~s~ 296 (299)
.+..+.+|...|.+++|+|+ ++|++|+.|++|++||+.+++++..+. +|.. .|.+++|+|+|++|++++.
T Consensus 182 ~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~--~V~~v~~spdg~~l~s~s~ 259 (611)
T 1nr0_A 182 FKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSG--SVFGLTWSPDGTKIASASA 259 (611)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSS--CEEEEEECTTSSEEEEEET
T ss_pred EeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCC--CEEEEEECCCCCEEEEEeC
Confidence 98999999999999999999 999999999999999999999988884 5766 8999999999999999986
Q ss_pred c
Q 022324 297 L 297 (299)
Q Consensus 297 ~ 297 (299)
-
T Consensus 260 D 260 (611)
T 1nr0_A 260 D 260 (611)
T ss_dssp T
T ss_pred C
Confidence 4
No 41
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.97 E-value=6.9e-29 Score=206.33 Aligned_cols=232 Identities=20% Similarity=0.196 Sum_probs=188.0
Q ss_pred hccCccchhhHHHhhhh-HHHHhhhhhHHHHHHhhhcCCCCCCCchhhhhhhhhhhccccceeecCceeeEEeeccccCe
Q 022324 37 SSLGFFDLVRCSAVCKS-WNAIINRCKLLQLLYCKLHGFSNTSGSSMRLHLEELAMKHHRFALEEGRIDIDQWKAHSVGV 115 (299)
Q Consensus 37 ~~~~h~~~v~~~~~~~~-~~~l~~~~~~w~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~h~~~i 115 (299)
++.+|.+.|++++|+|+ +++|++ ...|+++++|. +..... ......+++++|...|
T Consensus 33 tL~GH~~~V~~v~~sp~~~~~l~S----------------~s~D~~i~vWd--~~~~~~-----~~~~~~~~l~~h~~~V 89 (340)
T 4aow_A 33 TLKGHNGWVTQIATTPQFPDMILS----------------ASRDKTIIMWK--LTRDET-----NYGIPQRALRGHSHFV 89 (340)
T ss_dssp EECCCSSCEEEEEECTTCTTEEEE----------------EETTSCEEEEE--ECCSSS-----CSEEEEEEECCCSSCE
T ss_pred EECCccCCEEEEEEeCCCCCEEEE----------------EcCCCeEEEEE--CCCCCc-----ccceeeEEEeCCCCCE
Confidence 46699999999999998 577876 33688899993 222111 1122366789999999
Q ss_pred eEEEe-cCC-EEEEEeCCCcEEEEecCCceeEEEecCCCceeE-EEEecCCCEEE-EEcCCeEEEEecCCceeeee---c
Q 022324 116 DQCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNAASL-VDFDFDESKIV-GLIGTRICIWRRNGLRSVFP---S 188 (299)
Q Consensus 116 ~~~~~-~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~-~~~d~~i~v~d~~~~~~~~~---~ 188 (299)
.++.| +++ +|++++.|+.|++|+............+..... ..+++++..++ ++.|+.+++||......... .
T Consensus 90 ~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~ 169 (340)
T 4aow_A 90 SDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDES 169 (340)
T ss_dssp EEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSS
T ss_pred EEEEECCCCCEEEEEcccccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEecc
Confidence 99999 666 999999999999999999888877776655544 88899999988 99999999999987653332 2
Q ss_pred cCCccceeeeeccCCC--eEEEecCCCcEEEEEcCCcceeeeccccCCceeEEEeCCC-CeEEEEeCCCcEEEEeCCCCc
Q 022324 189 REGTFMKGLCMRYFDP--EAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGSSLGSIAISGLSSDQ 265 (299)
Q Consensus 189 ~~~~~~~~~~~~~~~~--~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~ 265 (299)
+..... .+++.+.+. .+++++.|+.|++||+++++.+..+.+|..+|++++|+|+ ++|++|+.|+.|++||+++.+
T Consensus 170 ~~~~v~-~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~ 248 (340)
T 4aow_A 170 HSEWVS-CVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGK 248 (340)
T ss_dssp CSSCEE-EEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTE
T ss_pred ccCccc-ceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCc
Confidence 333322 346666543 4789999999999999999999999999999999999999 999999999999999999999
Q ss_pred eEEEeeccCCCCcEEEEEccCCCCeEEeee
Q 022324 266 RVATLRSTDCTGHIICLMYPQFLHMLFFLC 295 (299)
Q Consensus 266 ~~~~~~~~~~~~~i~~~~~s~~g~~l~s~s 295 (299)
++..+..+. .|.+++|+|++.+++++.
T Consensus 249 ~~~~~~~~~---~v~~~~~~~~~~~~~~~~ 275 (340)
T 4aow_A 249 HLYTLDGGD---IINALCFSPNRYWLCAAT 275 (340)
T ss_dssp EEEEEECSS---CEEEEEECSSSSEEEEEE
T ss_pred eeeeecCCc---eEEeeecCCCCceeeccC
Confidence 999888765 799999999988776654
No 42
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.97 E-value=4.1e-28 Score=201.54 Aligned_cols=191 Identities=15% Similarity=0.170 Sum_probs=155.7
Q ss_pred eeEEeeccccCeeEEEecCCEEEEEeCCCcEEEEecCCc--eeEEEe-cC-CCc-eeEEEEecCCCEEE-EEcCCeEEEE
Q 022324 104 DIDQWKAHSVGVDQCRMKRGLILTGVGDKVMRLWSLEGY--KCVEEY-SL-PNA-ASLVDFDFDESKIV-GLIGTRICIW 177 (299)
Q Consensus 104 ~~~~~~~h~~~i~~~~~~~~~l~s~~~dg~i~iwd~~~~--~~~~~~-~~-~~~-~~~~~~~~~~~~l~-~~~d~~i~v~ 177 (299)
.++++++|.++|+++.|.+++|++|+.|++|++||+.++ +....+ .. |.. +..++|+|++++|+ ++.|+.|++|
T Consensus 6 ~~~~~~~h~~~v~~~~~s~~~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw 85 (330)
T 2hes_X 6 LIKSLKLYKEKIWSFDFSQGILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIW 85 (330)
T ss_dssp EEEEEECCSSCEEEEEEETTEEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred cceeeccCCCceeeeccCCCEEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEE
Confidence 367789999999999996569999999999999999875 455555 33 554 45599999999999 9999999999
Q ss_pred ecCCc---------eeeeeccCCccceeeeeccCCCeEEEecCCCcEEEEEcCCc----ceeeeccccCCceeEEEeCCC
Q 022324 178 RRNGL---------RSVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSR----KCSQIIRMHCAPVTSLSLSED 244 (299)
Q Consensus 178 d~~~~---------~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~----~~~~~~~~~~~~i~~~~~~~~ 244 (299)
|+... ...+..|.+.+. .++|+|++.+|++|+.|+.|++||++.. +.+..+..|...|.+++|+|+
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~h~~~V~-~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~ 164 (330)
T 2hes_X 86 AKEESADRTFEMDLLAIIEGHENEVK-GVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPS 164 (330)
T ss_dssp EC-------CCCEEEEEEC----CEE-EEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSS
T ss_pred EcccCcCccccceeEEEEcCCCCcEE-EEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCC
Confidence 98532 123445555544 4689999999999999999999999532 456777889999999999999
Q ss_pred -CeEEEEeCCCcEEEEeCCCC--ceEEEeeccCCCCcEEEEEccCC--CCeEEeeecc
Q 022324 245 -QLIISGSSLGSIAISGLSSD--QRVATLRSTDCTGHIICLMYPQF--LHMLFFLCFL 297 (299)
Q Consensus 245 -~~l~~~~~dg~i~iwd~~~~--~~~~~~~~~~~~~~i~~~~~s~~--g~~l~s~s~~ 297 (299)
.+|++|+.|++|++||..++ +++..+.+|.. .|.+++|+|+ +.+|++|+.-
T Consensus 165 ~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~--~v~~~~~~~~~~~~~l~s~s~D 220 (330)
T 2hes_X 165 EALLASSSYDDTVRIWKDYDDDWECVAVLNGHEG--TVWSSDFDKTEGVFRLCSGSDD 220 (330)
T ss_dssp SSEEEEEETTSCEEEEEEETTEEEEEEEECCCSS--CEEEEEECCSSSSCEEEEEETT
T ss_pred CCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCC--cEEEEEecCCCCeeEEEEEeCC
Confidence 99999999999999998776 67889999988 9999999998 7789998753
No 43
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.97 E-value=2e-30 Score=213.12 Aligned_cols=251 Identities=13% Similarity=0.095 Sum_probs=202.0
Q ss_pred CCCCCCCcchhccCcHHHHHHHhhccCccchhhHHHhhhhHHHHhhhhhHHHHHHhhhcCCCCCCCchhhhhhhhhhhcc
Q 022324 14 KKRSSKPRATIESLNGDIICMIFSSLGFFDLVRCSAVCKSWNAIINRCKLLQLLYCKLHGFSNTSGSSMRLHLEELAMKH 93 (299)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~i~~~~~h~~~v~~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 93 (299)
....+..+..+++|+.+.......+..|.+.|.+++|+|+++.+++ ...|+.+++| ++....
T Consensus 31 ~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~----------------~~~dg~i~~~--~~~~~~ 92 (313)
T 3odt_A 31 KVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLF----------------GGKDTMINGV--PLFATS 92 (313)
T ss_dssp EEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEE----------------EETTSCEEEE--ETTCCT
T ss_pred EEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEE----------------ecCCCeEEEE--EeeecC
Confidence 3444556778999998776666677789999999999999999886 2245556666 222111
Q ss_pred ccceeecCceeeEEeeccccCeeEEEecCCEEEEEeCCCcEEEEecCCceeEEEecCCCcee-EEEEec-CCCEEE-EEc
Q 022324 94 HRFALEEGRIDIDQWKAHSVGVDQCRMKRGLILTGVGDKVMRLWSLEGYKCVEEYSLPNAAS-LVDFDF-DESKIV-GLI 170 (299)
Q Consensus 94 ~~~~l~~g~~~~~~~~~h~~~i~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~-~~~~~~-~~~~l~-~~~ 170 (299)
....+..+.+|...|.++.|.++++++++.||.|++|| .++.+..+..|...+ .+++.+ +++.++ ++.
T Consensus 93 -------~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~ 163 (313)
T 3odt_A 93 -------GEDPLYTLIGHQGNVCSLSFQDGVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVVSFSENKFLTASA 163 (313)
T ss_dssp -------TSCC-CEECCCSSCEEEEEEETTEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEEETTTTEEEEEET
T ss_pred -------CCCcccchhhcccCEEEEEecCCEEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEccCCCCEEEEEEC
Confidence 11224556899999999999777999999999999999 677788888776555 488887 888888 999
Q ss_pred CCeEEEEecCCceeeeec-cCCccceeeeeccCCCeEEEecCCCcEEEEEcCCcceeeeccccCCceeEEEeCCCCeEEE
Q 022324 171 GTRICIWRRNGLRSVFPS-REGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSEDQLIIS 249 (299)
Q Consensus 171 d~~i~v~d~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~ 249 (299)
|+.|++||.......+.. +... ...+++++++. +++++.|+.|++||+++++.+..+..|...|.+++|+|+..+++
T Consensus 164 d~~i~i~d~~~~~~~~~~~~~~~-i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~ 241 (313)
T 3odt_A 164 DKTIKLWQNDKVIKTFSGIHNDV-VRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNGDIVS 241 (313)
T ss_dssp TSCEEEEETTEEEEEECSSCSSC-EEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSCEEE
T ss_pred CCCEEEEecCceEEEEeccCccc-EEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhhhcCCceEEEEEEecCCCEEE
Confidence 999999996655555555 4333 33568888877 99999999999999999999999999999999999999956999
Q ss_pred EeCCCcEEEEeCCCCceEEEeeccCCCCcEEEEEccCCCCeEEeeec
Q 022324 250 GSSLGSIAISGLSSDQRVATLRSTDCTGHIICLMYPQFLHMLFFLCF 296 (299)
Q Consensus 250 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~s~s~ 296 (299)
++.||.|++||+++++++..+..+.. +|.+++|+|++++++ ++.
T Consensus 242 ~~~dg~v~iwd~~~~~~~~~~~~~~~--~i~~~~~~~~~~~~~-~~~ 285 (313)
T 3odt_A 242 CGEDRTVRIWSKENGSLKQVITLPAI--SIWSVDCMSNGDIIV-GSS 285 (313)
T ss_dssp EETTSEEEEECTTTCCEEEEEECSSS--CEEEEEECTTSCEEE-EET
T ss_pred EecCCEEEEEECCCCceeEEEeccCc--eEEEEEEccCCCEEE-EeC
Confidence 99999999999999999999999887 899999999999554 543
No 44
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.9e-29 Score=211.74 Aligned_cols=231 Identities=14% Similarity=0.156 Sum_probs=192.4
Q ss_pred HhhccCccchhhHHHhhhhHHHHhhhhhHHHHHHhhhcCCCCCCCchhhhhhhhhhhccccceeecCceeeEEeeccccC
Q 022324 35 IFSSLGFFDLVRCSAVCKSWNAIINRCKLLQLLYCKLHGFSNTSGSSMRLHLEELAMKHHRFALEEGRIDIDQWKAHSVG 114 (299)
Q Consensus 35 i~~~~~h~~~v~~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~h~~~ 114 (299)
...+.+|.+.|++++|+|+++++++ ...|+.+++|. +.. ...+..+.+|...
T Consensus 25 ~~~l~~h~~~v~~~~~s~~~~~l~~----------------~~~dg~i~vwd--~~~----------~~~~~~~~~h~~~ 76 (369)
T 3zwl_B 25 AIKLTGHERPLTQVKYNKEGDLLFS----------------CSKDSSASVWY--SLN----------GERLGTLDGHTGT 76 (369)
T ss_dssp EEEEECCSSCEEEEEECTTSCEEEE----------------EESSSCEEEEE--TTT----------CCEEEEECCCSSC
T ss_pred cEEEEEeeceEEEEEEcCCCCEEEE----------------EeCCCEEEEEe--CCC----------chhhhhhhhcCCc
Confidence 4457799999999999999999887 22566777773 221 2234566899999
Q ss_pred eeEEEe-cCC-EEEEEeCCCcEEEEecCCceeEEEecCCCceeEEEEecCCCEEE-EEcC-----CeEEEEecCCcee--
Q 022324 115 VDQCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIV-GLIG-----TRICIWRRNGLRS-- 184 (299)
Q Consensus 115 i~~~~~-~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~d-----~~i~v~d~~~~~~-- 184 (299)
|.++.| +++ +|++++.||.|++||+.+++.+..+.....+..++|+|+++.++ ++.+ +.|++||+.....
T Consensus 77 v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~ 156 (369)
T 3zwl_B 77 IWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVATWKSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATH 156 (369)
T ss_dssp EEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTC
T ss_pred EEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccce
Confidence 999999 555 99999999999999999999999998777777799999999999 8887 9999999875431
Q ss_pred -----------eeeccCC-ccceeeeeccCCCeEEEecCCCcEEEEEcCC-cceeeeccccCCceeEEEeCCC-CeEEEE
Q 022324 185 -----------VFPSREG-TFMKGLCMRYFDPEAVVGCEDGTARVFDMYS-RKCSQIIRMHCAPVTSLSLSED-QLIISG 250 (299)
Q Consensus 185 -----------~~~~~~~-~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~-~~~~~~~~~~~~~i~~~~~~~~-~~l~~~ 250 (299)
.+..+.+ .....+++++++..+++++.|+.|++||+++ ++.+..+..|...|.+++|+|+ ++|+++
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 236 (369)
T 3zwl_B 157 ELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITS 236 (369)
T ss_dssp CEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEE
T ss_pred eecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEe
Confidence 1112222 1233568899999999999999999999998 7788888889999999999999 999999
Q ss_pred eCCCcEEEEeCCCCceEEEeeccCCCCcEEEEEccCCCCeEEeeec
Q 022324 251 SSLGSIAISGLSSDQRVATLRSTDCTGHIICLMYPQFLHMLFFLCF 296 (299)
Q Consensus 251 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~s~s~ 296 (299)
+.|+.|++||+++++.+..+... . .+.+++|+|+++++++++.
T Consensus 237 ~~d~~i~v~d~~~~~~~~~~~~~-~--~~~~~~~~~~~~~l~~~~~ 279 (369)
T 3zwl_B 237 SRDTNSFLVDVSTLQVLKKYETD-C--PLNTAVITPLKEFIILGGG 279 (369)
T ss_dssp ETTSEEEEEETTTCCEEEEEECS-S--CEEEEEECSSSSEEEEEEC
T ss_pred cCCceEEEEECCCCceeeeecCC-C--CceeEEecCCCceEEEeec
Confidence 99999999999999999888843 3 8999999999999999874
No 45
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=2.6e-29 Score=211.81 Aligned_cols=235 Identities=11% Similarity=0.056 Sum_probs=183.2
Q ss_pred HHhhccCccchhhHHHhhhhHHHHhhhhhHHHHHHhhhcCCCCCCCchhhhhhhhhhhccccceeecCceeeEEeecccc
Q 022324 34 MIFSSLGFFDLVRCSAVCKSWNAIINRCKLLQLLYCKLHGFSNTSGSSMRLHLEELAMKHHRFALEEGRIDIDQWKAHSV 113 (299)
Q Consensus 34 ~i~~~~~h~~~v~~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~h~~ 113 (299)
.+..+.+|.+.|++++|+|+++++++ ...|+.+++|.. .. .....+..+.+|..
T Consensus 3 ~~~~~~~h~~~v~~~~~s~~~~~l~~----------------~~~dg~i~iw~~--~~--------~~~~~~~~~~~h~~ 56 (379)
T 3jrp_A 3 MVVIANAHNELIHDAVLDYYGKRLAT----------------CSSDKTIKIFEV--EG--------ETHKLIDTLTGHEG 56 (379)
T ss_dssp --CCEEECCCCEEEEEECSSSSEEEE----------------EETTSCEEEEEE--ET--------TEEEEEEEECCCSS
T ss_pred ccEEecCCcccEEEEEEcCCCCEEEE----------------EECCCcEEEEec--CC--------CcceeeeEecCCCC
Confidence 34556789999999999999999987 225677888832 10 01123566789999
Q ss_pred CeeEEEe-cC--C-EEEEEeCCCcEEEEecCCce--eEEEecCCCce-eEEEEecC--CCEEE-EEcCCeEEEEecCCce
Q 022324 114 GVDQCRM-KR--G-LILTGVGDKVMRLWSLEGYK--CVEEYSLPNAA-SLVDFDFD--ESKIV-GLIGTRICIWRRNGLR 183 (299)
Q Consensus 114 ~i~~~~~-~~--~-~l~s~~~dg~i~iwd~~~~~--~~~~~~~~~~~-~~~~~~~~--~~~l~-~~~d~~i~v~d~~~~~ 183 (299)
+|+++.| ++ + +|++++.||.|++||+.+++ .+..+..|... ..++|+|+ +..++ ++.|+.|++||+++..
T Consensus 57 ~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~ 136 (379)
T 3jrp_A 57 PVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENG 136 (379)
T ss_dssp CEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTS
T ss_pred cEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCC
Confidence 9999999 44 4 99999999999999999987 66677766544 45999999 88888 9999999999998763
Q ss_pred ----eeeeccCCccceeeeecc-------------CCCeEEEecCCCcEEEEEcCCcc----eeeeccccCCceeEEEeC
Q 022324 184 ----SVFPSREGTFMKGLCMRY-------------FDPEAVVGCEDGTARVFDMYSRK----CSQIIRMHCAPVTSLSLS 242 (299)
Q Consensus 184 ----~~~~~~~~~~~~~~~~~~-------------~~~~l~s~~~d~~i~iwd~~~~~----~~~~~~~~~~~i~~~~~~ 242 (299)
..+..+...+. .+++++ ++..+++++.|+.|++||++++. ....+..|...|.+++|+
T Consensus 137 ~~~~~~~~~~~~~v~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~s 215 (379)
T 3jrp_A 137 TTSPIIIDAHAIGVN-SASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWS 215 (379)
T ss_dssp CCCEEEEECCTTCEE-EEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEEC
T ss_pred ceeeEEecCCCCceE-EEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEEC
Confidence 23334444433 457888 57789999999999999998764 445667899999999999
Q ss_pred CC----CeEEEEeCCCcEEEEeCCCCc---eEEEeec--cCCCCcEEEEEccCCCCeEEeeecc
Q 022324 243 ED----QLIISGSSLGSIAISGLSSDQ---RVATLRS--TDCTGHIICLMYPQFLHMLFFLCFL 297 (299)
Q Consensus 243 ~~----~~l~~~~~dg~i~iwd~~~~~---~~~~~~~--~~~~~~i~~~~~s~~g~~l~s~s~~ 297 (299)
|+ .+|++++.||.|++||+++++ ....+.. +.. .|++++|+|+|++|++++.-
T Consensus 216 p~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~--~v~~~~~s~~g~~l~~~~~d 277 (379)
T 3jrp_A 216 PTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPD--VLWRASWSLSGNVLALSGGD 277 (379)
T ss_dssp CCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSS--CEEEEEECSSSCCEEEEESS
T ss_pred CCCCCCCeEEEEeCCCEEEEEeCCCCCccceeeeeccccCCC--cEEEEEEcCCCCEEEEecCC
Confidence 86 589999999999999998864 2222222 444 89999999999999998754
No 46
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.97 E-value=5.4e-29 Score=209.52 Aligned_cols=227 Identities=16% Similarity=0.117 Sum_probs=185.7
Q ss_pred CccchhhHHHhhhhHHHHhhhhhHHHHHHhhhcCCCCCCCchhhhhhhhhhhccccceeecCceeeEEeeccccCeeEEE
Q 022324 40 GFFDLVRCSAVCKSWNAIINRCKLLQLLYCKLHGFSNTSGSSMRLHLEELAMKHHRFALEEGRIDIDQWKAHSVGVDQCR 119 (299)
Q Consensus 40 ~h~~~v~~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~h~~~i~~~~ 119 (299)
.|.+.|.+++|+|+++++++ ...++.+++|.. .... ...+..+.+|...|.++.
T Consensus 6 ~~~~~i~~~~~s~~~~~l~~----------------~~~d~~v~i~~~--~~~~--------~~~~~~~~~h~~~v~~~~ 59 (372)
T 1k8k_C 6 FLVEPISCHAWNKDRTQIAI----------------CPNNHEVHIYEK--SGNK--------WVQVHELKEHNGQVTGVD 59 (372)
T ss_dssp SCSSCCCEEEECTTSSEEEE----------------ECSSSEEEEEEE--ETTE--------EEEEEEEECCSSCEEEEE
T ss_pred ccCCCeEEEEECCCCCEEEE----------------EeCCCEEEEEeC--CCCc--------EEeeeeecCCCCcccEEE
Confidence 48899999999999999886 235667777732 1111 014667789999999999
Q ss_pred e-cCC-EEEEEeCCCcEEEEecCCceeEEEe--cCCC-ceeEEEEecCCCEEE-EEcCCeEEEEecCCce-----eee-e
Q 022324 120 M-KRG-LILTGVGDKVMRLWSLEGYKCVEEY--SLPN-AASLVDFDFDESKIV-GLIGTRICIWRRNGLR-----SVF-P 187 (299)
Q Consensus 120 ~-~~~-~l~s~~~dg~i~iwd~~~~~~~~~~--~~~~-~~~~~~~~~~~~~l~-~~~d~~i~v~d~~~~~-----~~~-~ 187 (299)
| +++ +|++++.||.|++||+.+++....+ ..+. .+..++|+|++++++ ++.|+.|++||++... ..+ .
T Consensus 60 ~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~ 139 (372)
T 1k8k_C 60 WAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKK 139 (372)
T ss_dssp EETTTTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECT
T ss_pred EeCCCCEEEEEcCCCeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeec
Confidence 9 555 9999999999999999988765544 3344 455599999999999 9999999999998764 112 2
Q ss_pred ccCCccceeeeeccCCCeEEEecCCCcEEEEEc------------------CCcceeeeccccCCceeEEEeCCC-CeEE
Q 022324 188 SREGTFMKGLCMRYFDPEAVVGCEDGTARVFDM------------------YSRKCSQIIRMHCAPVTSLSLSED-QLII 248 (299)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~------------------~~~~~~~~~~~~~~~i~~~~~~~~-~~l~ 248 (299)
.+...+ ..+++++++..+++++.|+.|++||+ ..++.+..+..|...|.+++|+|+ ++|+
T Consensus 140 ~~~~~i-~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 218 (372)
T 1k8k_C 140 PIRSTV-LSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVA 218 (372)
T ss_dssp TCCSCE-EEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEE
T ss_pred ccCCCe-eEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEE
Confidence 233333 35688898999999999999999995 367788888889999999999999 8999
Q ss_pred EEeCCCcEEEEeCCCCceEEEeeccCCCCcEEEEEccCCCCeEEeee
Q 022324 249 SGSSLGSIAISGLSSDQRVATLRSTDCTGHIICLMYPQFLHMLFFLC 295 (299)
Q Consensus 249 ~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~s~s 295 (299)
+++.|+.|++||+++++++..+..+.. +|.+++|+|++++|++|+
T Consensus 219 ~~~~d~~i~i~d~~~~~~~~~~~~~~~--~v~~~~~~~~~~~l~~~~ 263 (372)
T 1k8k_C 219 WVSHDSTVCLADADKKMAVATLASETL--PLLAVTFITESSLVAAGH 263 (372)
T ss_dssp EEETTTEEEEEEGGGTTEEEEEECSSC--CEEEEEEEETTEEEEEET
T ss_pred EEeCCCEEEEEECCCCceeEEEccCCC--CeEEEEEecCCCEEEEEe
Confidence 999999999999999999999998887 899999999999998874
No 47
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.97 E-value=1.3e-29 Score=217.30 Aligned_cols=246 Identities=13% Similarity=0.131 Sum_probs=198.0
Q ss_pred CcchhccCcHHHHHHH--hhccCccchhhHHHhhhhHHHHhhhhhHHHHHHhhhcCCCCCCCchhhhhhhhhhhccccce
Q 022324 20 PRATIESLNGDIICMI--FSSLGFFDLVRCSAVCKSWNAIINRCKLLQLLYCKLHGFSNTSGSSMRLHLEELAMKHHRFA 97 (299)
Q Consensus 20 ~~~~~~~~~~~~~~~i--~~~~~h~~~v~~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 97 (299)
.+.++++|+.+++..+ +.+.+|.+.|+|++|+|+++++++ ...|+.+++|.. ..
T Consensus 123 ld~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~las----------------gs~Dg~v~iWd~--~~------ 178 (420)
T 4gga_A 123 LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAV----------------GTSSAEVQLWDV--QQ------ 178 (420)
T ss_dssp ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEE----------------EETTSCEEEEET--TT------
T ss_pred eCCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEE----------------EECCCeEEEEEc--CC------
Confidence 3567899999887643 344578899999999999999987 336788888832 22
Q ss_pred eecCceeeEEeeccccCeeEEEecCCEEEEEeCCCcEEEEecCCc-eeEEEecCCCceeE-EEEecCCCEEE-EEcCCeE
Q 022324 98 LEEGRIDIDQWKAHSVGVDQCRMKRGLILTGVGDKVMRLWSLEGY-KCVEEYSLPNAASL-VDFDFDESKIV-GLIGTRI 174 (299)
Q Consensus 98 l~~g~~~~~~~~~h~~~i~~~~~~~~~l~s~~~dg~i~iwd~~~~-~~~~~~~~~~~~~~-~~~~~~~~~l~-~~~d~~i 174 (299)
...++.+.+|...|.++.+.+.+|++|+.|+.+++||.... ..+..+..|...+. +.++|+++.++ ++.|+.+
T Consensus 179 ----~~~~~~~~~h~~~v~~~s~~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v 254 (420)
T 4gga_A 179 ----QKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLV 254 (420)
T ss_dssp ----TEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred ----CcEEEEEeCCCCceEEEeeCCCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccc
Confidence 23356678999999999998779999999999999998864 45667777766665 99999999999 9999999
Q ss_pred EEEecCCce------eeeeccCCccceeeeeccCCCe-EE--EecCCCcEEEEEcCCcceeeeccccCCceeEEEeCCC-
Q 022324 175 CIWRRNGLR------SVFPSREGTFMKGLCMRYFDPE-AV--VGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED- 244 (299)
Q Consensus 175 ~v~d~~~~~------~~~~~~~~~~~~~~~~~~~~~~-l~--s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~- 244 (299)
++|+..+.+ .....+.+.+. .+++++.+.. ++ +|+.|+.|++||+.+++....+.. ...+.++.|+|+
T Consensus 255 ~i~~~~~~~~~~~~~~~~~~~~~~V~-~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~-~~~v~~~~~~~~~ 332 (420)
T 4gga_A 255 NVWPSAPGEGGWVPLQTFTQHQGAVK-AVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDA-HSQVCSILWSPHY 332 (420)
T ss_dssp EEEESSCCSSCSCCSEEECCCSSCEE-EEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEEC-SSCEEEEEEETTT
T ss_pred eEEeeccccccceeeeeecccCCcee-eeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeecc-ccceeeeeecCCC
Confidence 999998654 22333444433 4577887766 33 356899999999999999888855 456889999998
Q ss_pred CeEEEEe--CCCcEEEEeCCCCceEEEeeccCCCCcEEEEEccCCCCeEEeeecc
Q 022324 245 QLIISGS--SLGSIAISGLSSDQRVATLRSTDCTGHIICLMYPQFLHMLFFLCFL 297 (299)
Q Consensus 245 ~~l~~~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~s~s~~ 297 (299)
+.+++++ .|+.|+|||+++++++.++.+|.. .|++++|+|+|++|++||.-
T Consensus 333 ~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~--~V~~l~~spdg~~l~S~s~D 385 (420)
T 4gga_A 333 KELISGHGFAQNQLVIWKYPTMAKVAELKGHTS--RVLSLTMSPDGATVASAAAD 385 (420)
T ss_dssp TEEEEEECTTTCCEEEEETTTCCEEEEECCCSS--CEEEEEECTTSSCEEEEETT
T ss_pred CeEEEEEecCCCEEEEEECCCCcEEEEEcCCCC--CEEEEEEcCCCCEEEEEecC
Confidence 7776654 799999999999999999999988 99999999999999999864
No 48
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.97 E-value=4.7e-29 Score=207.35 Aligned_cols=233 Identities=14% Similarity=0.057 Sum_probs=184.4
Q ss_pred cCccchhhHHHhhhhHHHHhhhhhHHHHHHhhhcCCCCCCCchhhhhhhhhhhccccceeecCceeeEEeeccccCeeEE
Q 022324 39 LGFFDLVRCSAVCKSWNAIINRCKLLQLLYCKLHGFSNTSGSSMRLHLEELAMKHHRFALEEGRIDIDQWKAHSVGVDQC 118 (299)
Q Consensus 39 ~~h~~~v~~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~h~~~i~~~ 118 (299)
.+|.+.|++++|+|+++++++ ...|+.+++|.. ...... ......+.+|..+|.++
T Consensus 8 ~gH~~~v~~~~~~~~~~~l~~----------------~~~dg~i~iw~~--~~~~~~------~~~~~~~~~~~~~v~~~ 63 (351)
T 3f3f_A 8 SGHDDLVHDVVYDFYGRHVAT----------------CSSDQHIKVFKL--DKDTSN------WELSDSWRAHDSSIVAI 63 (351)
T ss_dssp CCCSSCEEEEEECSSSSEEEE----------------EETTSEEEEEEE--CSSSCC------EEEEEEEECCSSCEEEE
T ss_pred cccccceeEEEEcCCCCEEEE----------------eeCCCeEEEEEC--CCCCCc------ceecceeccCCCcEEEE
Confidence 489999999999999999987 235677888832 211100 02356678999999999
Q ss_pred Ee-c--CC-EEEEEeCCCcEEEEecCCc---------eeEEEecCCCcee-EEEEecC--CCEEE-EEcCCeEEEEecCC
Q 022324 119 RM-K--RG-LILTGVGDKVMRLWSLEGY---------KCVEEYSLPNAAS-LVDFDFD--ESKIV-GLIGTRICIWRRNG 181 (299)
Q Consensus 119 ~~-~--~~-~l~s~~~dg~i~iwd~~~~---------~~~~~~~~~~~~~-~~~~~~~--~~~l~-~~~d~~i~v~d~~~ 181 (299)
.| + ++ +|++|+.||.|++||+.++ +.+..+..|...+ .++|+|+ +++++ ++.|+.|++||+++
T Consensus 64 ~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~ 143 (351)
T 3f3f_A 64 DWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALE 143 (351)
T ss_dssp EECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSS
T ss_pred EEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCC
Confidence 99 4 35 9999999999999999887 5677777776555 4999999 89888 99999999999987
Q ss_pred ceeee--e-------------ccCCccceeeeeccC---CCeEEEecCCCcEEEEEcCCcce--eeeccccCCceeEEEe
Q 022324 182 LRSVF--P-------------SREGTFMKGLCMRYF---DPEAVVGCEDGTARVFDMYSRKC--SQIIRMHCAPVTSLSL 241 (299)
Q Consensus 182 ~~~~~--~-------------~~~~~~~~~~~~~~~---~~~l~s~~~d~~i~iwd~~~~~~--~~~~~~~~~~i~~~~~ 241 (299)
..... . .+... ...++++|. +..+++++.++.+.+|+...++. +..+..|...|.+++|
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~ 222 (351)
T 3f3f_A 144 PSDLRSWTLTSEMKVLSIPPANHLQS-DFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISW 222 (351)
T ss_dssp TTCTTCCEEEEEEESCSCCCSSCSCC-CEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEE
T ss_pred hHHhccccccccccccccccCCcccc-eeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEE
Confidence 64211 1 12222 224577776 77799999999998888877765 6677789999999999
Q ss_pred CCC-----CeEEEEeCCCcEEEEeCCCC----------------------------------------------ceEEEe
Q 022324 242 SED-----QLIISGSSLGSIAISGLSSD----------------------------------------------QRVATL 270 (299)
Q Consensus 242 ~~~-----~~l~~~~~dg~i~iwd~~~~----------------------------------------------~~~~~~ 270 (299)
+|+ ++|++|+.||.|++||++++ +.+..+
T Consensus 223 ~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (351)
T 3f3f_A 223 APSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEH 302 (351)
T ss_dssp CCCSSCSSEEEEEEETTSCEEEEEEEECC---------------------------------------CCSEEEEEEEEE
T ss_pred CCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEE
Confidence 998 48999999999999999865 667778
Q ss_pred eccCCCCcEEEEEccCCCCeEEeeeccc
Q 022324 271 RSTDCTGHIICLMYPQFLHMLFFLCFLP 298 (299)
Q Consensus 271 ~~~~~~~~i~~~~~s~~g~~l~s~s~~~ 298 (299)
.+|.. .|++++|+|++++|++|+.-+
T Consensus 303 ~~h~~--~v~~~~~s~~~~~l~s~~~dg 328 (351)
T 3f3f_A 303 DDHNG--EVWSVSWNLTGTILSSAGDDG 328 (351)
T ss_dssp CTTSS--CEEEEEECSSSCCEEEEETTS
T ss_pred ecccc--cEEEEEEcCCCCEEEEecCCC
Confidence 88887 899999999999999998643
No 49
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.97 E-value=7.5e-28 Score=197.00 Aligned_cols=189 Identities=17% Similarity=0.226 Sum_probs=155.2
Q ss_pred EEeeccccCeeEEEe-cCC-EEEEEeCCCcEEEEecCC--ceeEEEecCCCceeE-EEEecC--CCEEE-EEcCCeEEEE
Q 022324 106 DQWKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEG--YKCVEEYSLPNAASL-VDFDFD--ESKIV-GLIGTRICIW 177 (299)
Q Consensus 106 ~~~~~h~~~i~~~~~-~~~-~l~s~~~dg~i~iwd~~~--~~~~~~~~~~~~~~~-~~~~~~--~~~l~-~~~d~~i~v~ 177 (299)
.++.+|.+.|++++| +++ +|++|+.|++|++||+.+ .+++.++.+|...+. ++|+++ +++|+ ++.|++|++|
T Consensus 3 ~~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iW 82 (297)
T 2pm7_B 3 VIANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIW 82 (297)
T ss_dssp EECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEE
T ss_pred eeccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEE
Confidence 356899999999999 566 999999999999999974 467788888876655 999763 78888 9999999999
Q ss_pred ecCCce----eeeeccCCccceeeeeccC--CCeEEEecCCCcEEEEEcCCcce--eeeccccCCceeEEEeCCC-----
Q 022324 178 RRNGLR----SVFPSREGTFMKGLCMRYF--DPEAVVGCEDGTARVFDMYSRKC--SQIIRMHCAPVTSLSLSED----- 244 (299)
Q Consensus 178 d~~~~~----~~~~~~~~~~~~~~~~~~~--~~~l~s~~~d~~i~iwd~~~~~~--~~~~~~~~~~i~~~~~~~~----- 244 (299)
|++++. ..+..+...+. .++|+|+ +..+++++.|+.|++||++++.. ...+..|...|.+++|+|+
T Consensus 83 d~~~~~~~~~~~~~~h~~~v~-~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~ 161 (297)
T 2pm7_B 83 KEENGRWSQIAVHAVHSASVN-SVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEED 161 (297)
T ss_dssp EBSSSCBCCCEEECCCSSCEE-EEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC----
T ss_pred EcCCCceEEEEEeecCCCcee-EEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCccccc
Confidence 998753 22334444433 4578886 67899999999999999987632 3456689999999999985
Q ss_pred ---------CeEEEEeCCCcEEEEeCCCCc----eEEEeeccCCCCcEEEEEccCCC---CeEEeeecc
Q 022324 245 ---------QLIISGSSLGSIAISGLSSDQ----RVATLRSTDCTGHIICLMYPQFL---HMLFFLCFL 297 (299)
Q Consensus 245 ---------~~l~~~~~dg~i~iwd~~~~~----~~~~~~~~~~~~~i~~~~~s~~g---~~l~s~s~~ 297 (299)
++|++|+.|++|++||+++++ +..++.+|.. .|.+++|+|++ .+|++||.-
T Consensus 162 ~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~--~V~~v~~sp~~~~~~~las~s~D 228 (297)
T 2pm7_B 162 GEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSD--WVRDVAWSPTVLLRSYMASVSQD 228 (297)
T ss_dssp --------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSS--CEEEEEECCCCSSSEEEEEEETT
T ss_pred ccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCC--ceEEEEECCCCCCceEEEEEECC
Confidence 489999999999999998766 6678888888 99999999985 899999864
No 50
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.5e-29 Score=216.37 Aligned_cols=252 Identities=15% Similarity=0.103 Sum_probs=202.5
Q ss_pred CCCCCCCcchhccCcH----HHHHH------HhhccC----------ccchhhHHHhhhhHHHHhhhhhHHHHHHhhhcC
Q 022324 14 KKRSSKPRATIESLNG----DIICM------IFSSLG----------FFDLVRCSAVCKSWNAIINRCKLLQLLYCKLHG 73 (299)
Q Consensus 14 ~~~~~~~~~~~~~~~~----~~~~~------i~~~~~----------h~~~v~~~~~~~~~~~l~~~~~~w~~~~~~~~~ 73 (299)
..+.+..+..+.+|+. +.... ...+.. |.+.|.+++|+|+++++++
T Consensus 60 ~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-------------- 125 (425)
T 1r5m_A 60 ILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGNSIVT-------------- 125 (425)
T ss_dssp EEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSSEEEE--------------
T ss_pred EEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCCEEEE--------------
Confidence 3455566788999998 77763 333333 6889999999999998886
Q ss_pred CCCCCCchhhhhhhhhhhccccceeecCceeeEEeeccccCeeEEEe-cCC-EEEEEeCCCcEEEEecCCceeEEEecCC
Q 022324 74 FSNTSGSSMRLHLEELAMKHHRFALEEGRIDIDQWKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEYSLP 151 (299)
Q Consensus 74 ~~~~~d~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~h~~~i~~~~~-~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 151 (299)
...++.+++|. .....+..+.+|...|.++.| +++ +|++++.||.|++||+.+++.+..+..+
T Consensus 126 --~~~dg~i~i~~-------------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~ 190 (425)
T 1r5m_A 126 --GVENGELRLWN-------------KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELK 190 (425)
T ss_dssp --EETTSCEEEEE-------------TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC
T ss_pred --EeCCCeEEEEe-------------CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeecc
Confidence 22456667772 122334566899999999999 566 9999999999999999999999988876
Q ss_pred Cc----------------eeEEEEecCCCEEEEEcCCeEEEEecCCcee--eeeccCCccceeeeeccCCCeEEEecCCC
Q 022324 152 NA----------------ASLVDFDFDESKIVGLIGTRICIWRRNGLRS--VFPSREGTFMKGLCMRYFDPEAVVGCEDG 213 (299)
Q Consensus 152 ~~----------------~~~~~~~~~~~~l~~~~d~~i~v~d~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~s~~~d~ 213 (299)
.. +..++|++++.+++++.++.|++||+.+... .+..+...+. .+++++++..+++++.|+
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~-~~~~~~~~~~l~~~~~d~ 269 (425)
T 1r5m_A 191 ETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPIS-VLEFNDTNKLLLSASDDG 269 (425)
T ss_dssp ---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEE-EEEEETTTTEEEEEETTS
T ss_pred ccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceE-EEEECCCCCEEEEEcCCC
Confidence 55 4459999987766699999999999997653 3444444443 568899999999999999
Q ss_pred cEEEEEcCCcceeeeccccCCceeEEEeCCCCeEEEEeCCCcEEEEeCCCCceEEEeeccCCCCcEEEEEccCCCCeEEe
Q 022324 214 TARVFDMYSRKCSQIIRMHCAPVTSLSLSEDQLIISGSSLGSIAISGLSSDQRVATLRSTDCTGHIICLMYPQFLHMLFF 293 (299)
Q Consensus 214 ~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~s 293 (299)
.|++||+++++.+..+..|...|.+++|+|+.++++++.|+.|++||+++++.+..+..+.. +|.+++|+|++++|++
T Consensus 270 ~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~--~i~~~~~s~~~~~l~~ 347 (425)
T 1r5m_A 270 TLRIWHGGNGNSQNCFYGHSQSIVSASWVGDDKVISCSMDGSVRLWSLKQNTLLALSIVDGV--PIFAGRISQDGQKYAV 347 (425)
T ss_dssp CEEEECSSSBSCSEEECCCSSCEEEEEEETTTEEEEEETTSEEEEEETTTTEEEEEEECTTC--CEEEEEECTTSSEEEE
T ss_pred EEEEEECCCCccceEecCCCccEEEEEECCCCEEEEEeCCCcEEEEECCCCcEeEecccCCc--cEEEEEEcCCCCEEEE
Confidence 99999999999998888899999999999988899999999999999999999999998887 8999999999999999
Q ss_pred eecc
Q 022324 294 LCFL 297 (299)
Q Consensus 294 ~s~~ 297 (299)
++.-
T Consensus 348 ~~~d 351 (425)
T 1r5m_A 348 AFMD 351 (425)
T ss_dssp EETT
T ss_pred EECC
Confidence 9854
No 51
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.96 E-value=2.7e-28 Score=205.38 Aligned_cols=186 Identities=10% Similarity=0.044 Sum_probs=150.4
Q ss_pred eccccCeeEEEe-cCC-EEE--EEeCCCcEEEEecCCceeEEEecCCCceeEEEEecCCCEEEEEcCCeEEEEecCCcee
Q 022324 109 KAHSVGVDQCRM-KRG-LIL--TGVGDKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIVGLIGTRICIWRRNGLRS 184 (299)
Q Consensus 109 ~~h~~~i~~~~~-~~~-~l~--s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~i~v~d~~~~~~ 184 (299)
..+...+.+++| |++ +++ +++.|++|++||+.+++++..+..+..+..++|+|++++++.+.++.+.+|+..++..
T Consensus 130 ~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~~~~~V~~v~fspdg~~l~s~s~~~~~~~~~~~~~~ 209 (365)
T 4h5i_A 130 TNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIETRGEVKDLHFSTDGKVVAYITGSSLEVISTVTGSC 209 (365)
T ss_dssp CCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEECSSCCCEEEECTTSSEEEEECSSCEEEEETTTCCE
T ss_pred CCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeCCCCceEEEEEccCCceEEeccceeEEEEEeccCcc
Confidence 345567888999 677 554 5558999999999999999999877777889999999999955567777777766543
Q ss_pred ee----eccCCccceeeeeccCCCeEEEecCCC----cEEEEEcCCcce----eeeccccCCceeEEEeCCC-CeEEEEe
Q 022324 185 VF----PSREGTFMKGLCMRYFDPEAVVGCEDG----TARVFDMYSRKC----SQIIRMHCAPVTSLSLSED-QLIISGS 251 (299)
Q Consensus 185 ~~----~~~~~~~~~~~~~~~~~~~l~s~~~d~----~i~iwd~~~~~~----~~~~~~~~~~i~~~~~~~~-~~l~~~~ 251 (299)
.. ..+... ...++|+|++..+++++.|+ .++.||+..... ...+..|...|++++|+|+ ++||+|+
T Consensus 210 ~~~~~~~~~~~~-v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs 288 (365)
T 4h5i_A 210 IARKTDFDKNWS-LSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLAS 288 (365)
T ss_dssp EEEECCCCTTEE-EEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEE
T ss_pred eeeeecCCCCCC-EEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEc
Confidence 32 122222 23468899999999988777 588899876543 3455688899999999999 9999999
Q ss_pred CCCcEEEEeCCCCceEEEe-eccCCCCcEEEEEccCCCCeEEeeecc
Q 022324 252 SLGSIAISGLSSDQRVATL-RSTDCTGHIICLMYPQFLHMLFFLCFL 297 (299)
Q Consensus 252 ~dg~i~iwd~~~~~~~~~~-~~~~~~~~i~~~~~s~~g~~l~s~s~~ 297 (299)
.|++|+|||+++++++.++ .+|.. +|++++|+|||++|++||.-
T Consensus 289 ~D~~V~iwd~~~~~~~~~~~~gH~~--~V~~v~fSpdg~~laS~S~D 333 (365)
T 4h5i_A 289 NDNSIALVKLKDLSMSKIFKQAHSF--AITEVTISPDSTYVASVSAA 333 (365)
T ss_dssp TTSCEEEEETTTTEEEEEETTSSSS--CEEEEEECTTSCEEEEEETT
T ss_pred CCCEEEEEECCCCcEEEEecCcccC--CEEEEEECCCCCEEEEEeCC
Confidence 9999999999999999886 67887 99999999999999999864
No 52
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.3e-30 Score=228.34 Aligned_cols=231 Identities=9% Similarity=0.015 Sum_probs=168.9
Q ss_pred CCCCCCCcchhccCcHHHHHHH----hhccCccchhhHHHhhhh------HHHHhhhhhHHHHHHhhhcCCCCCCCchhh
Q 022324 14 KKRSSKPRATIESLNGDIICMI----FSSLGFFDLVRCSAVCKS------WNAIINRCKLLQLLYCKLHGFSNTSGSSMR 83 (299)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~i----~~~~~h~~~v~~~~~~~~------~~~l~~~~~~w~~~~~~~~~~~~~~d~~~~ 83 (299)
..+++..+.++++|+.+..... ..+.+|.+.|.+++|+|+ +.+||+ ...|++++
T Consensus 175 ~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs----------------~s~Dgtvr 238 (524)
T 2j04_B 175 MFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSF----------------VSQEGTIN 238 (524)
T ss_dssp -------CEEEEEEEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEE----------------EETTSCEE
T ss_pred hhccCCCCceEEEEEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEE----------------EecCCeEE
Confidence 3456678889999998765432 224467888999999997 456765 33678888
Q ss_pred hhhhhhhhccccc-eeecCceeeEEeeccccCeeEEEe-cCCEEEEEeCCCcEEEEecCCce-eEEEecCCCcee-EE--
Q 022324 84 LHLEELAMKHHRF-ALEEGRIDIDQWKAHSVGVDQCRM-KRGLILTGVGDKVMRLWSLEGYK-CVEEYSLPNAAS-LV-- 157 (299)
Q Consensus 84 ~~~~~~~~~~~~~-~l~~g~~~~~~~~~h~~~i~~~~~-~~~~l~s~~~dg~i~iwd~~~~~-~~~~~~~~~~~~-~~-- 157 (299)
+| ++....... ....-.....++.+|...|+++.| +++.|++|+.||+|++||+.+++ +...+..|...+ .+
T Consensus 239 lW--d~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~ 316 (524)
T 2j04_B 239 FL--EIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPTTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVST 316 (524)
T ss_dssp EE--ECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSSEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEE
T ss_pred EE--EcCCCccccccceeecCceEEEEcCCCCEEEEEecCCCeEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEE
Confidence 88 333221110 000011124467899999999999 55599999999999999999764 455677776554 47
Q ss_pred EEecCC-CEEE-EEcCCeEEEEecCCcee--eeeccCC-ccceeeeeccCCCeEEEecCCCcEEEEEcCCcceeeecccc
Q 022324 158 DFDFDE-SKIV-GLIGTRICIWRRNGLRS--VFPSREG-TFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMH 232 (299)
Q Consensus 158 ~~~~~~-~~l~-~~~d~~i~v~d~~~~~~--~~~~~~~-~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~ 232 (299)
.|++++ .+|+ ++.|++|++||+++.+. .+..+.. .....++|+|+++.+++++.|+.|++||++++..+..+.+|
T Consensus 317 ~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH 396 (524)
T 2j04_B 317 AYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSR 396 (524)
T ss_dssp ECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEEC
T ss_pred EcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecC
Confidence 567887 7888 99999999999987652 3333322 11224689999989999999999999999999888888899
Q ss_pred CCceeEEEeCCC-CeEEEEeCCCcEEEEeCC
Q 022324 233 CAPVTSLSLSED-QLIISGSSLGSIAISGLS 262 (299)
Q Consensus 233 ~~~i~~~~~~~~-~~l~~~~~dg~i~iwd~~ 262 (299)
...|++++|+|+ ++|++|+.||+|++||+.
T Consensus 397 ~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~ 427 (524)
T 2j04_B 397 ETTITAIGVSRLHPMVLAGSADGSLIITNAA 427 (524)
T ss_dssp SSCEEEEECCSSCCBCEEEETTTEEECCBSC
T ss_pred CCceEEEEeCCCCCeEEEEECCCEEEEEech
Confidence 999999999999 999999999999999864
No 53
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.96 E-value=4.2e-30 Score=218.36 Aligned_cols=258 Identities=12% Similarity=0.130 Sum_probs=204.7
Q ss_pred CCCCCCCCcchhccCcHHHHH------HHhhccCccchhhHHHhhhh----H---HHHhhhhhHHHHHHhhhcCCCCCCC
Q 022324 13 PKKRSSKPRATIESLNGDIIC------MIFSSLGFFDLVRCSAVCKS----W---NAIINRCKLLQLLYCKLHGFSNTSG 79 (299)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~------~i~~~~~h~~~v~~~~~~~~----~---~~l~~~~~~w~~~~~~~~~~~~~~d 79 (299)
+....+..+..+++|+.+... .+..+.+|...|.+++|+++ + +++++ ...|
T Consensus 27 ~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s----------------~~~d 90 (397)
T 1sq9_A 27 SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVAT----------------TSFS 90 (397)
T ss_dssp SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEE----------------EETT
T ss_pred CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEE----------------EcCC
Confidence 344455667789999988766 67777899999999999999 8 88886 2256
Q ss_pred chhhhhhhhhhhccccceeecCceeeEEeecc-----ccCeeEEEec----C-C-E-EEEEeCCCcEEEEecCC------
Q 022324 80 SSMRLHLEELAMKHHRFALEEGRIDIDQWKAH-----SVGVDQCRMK----R-G-L-ILTGVGDKVMRLWSLEG------ 141 (299)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~h-----~~~i~~~~~~----~-~-~-l~s~~~dg~i~iwd~~~------ 141 (299)
+.+++|. +..... .....+..+.+| ...|.++.|. . + + |++++.||.|++||+.+
T Consensus 91 g~i~iw~--~~~~~~-----~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~ 163 (397)
T 1sq9_A 91 GDLLFYR--ITREDE-----TKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESN 163 (397)
T ss_dssp SCEEEEE--EEECTT-----TCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHH
T ss_pred CCEEEEE--ccCCcc-----cccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccc
Confidence 7777773 222111 001114566788 5999999886 3 3 7 99999999999999998
Q ss_pred ceeEE-----EecC-------C-CceeEEEEecCCCEEE-EEcCCeEEEEecCCcee--eeec---c---CCccceeeee
Q 022324 142 YKCVE-----EYSL-------P-NAASLVDFDFDESKIV-GLIGTRICIWRRNGLRS--VFPS---R---EGTFMKGLCM 199 (299)
Q Consensus 142 ~~~~~-----~~~~-------~-~~~~~~~~~~~~~~l~-~~~d~~i~v~d~~~~~~--~~~~---~---~~~~~~~~~~ 199 (299)
++.+. .+.. + ..+..++|+|++ .++ ++.|+.|++||+++.+. .+.. + ...+ ..+++
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i-~~i~~ 241 (397)
T 1sq9_A 164 SLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSI-RSVKF 241 (397)
T ss_dssp HTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCE-EEEEE
T ss_pred cceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCcc-ceEEE
Confidence 66655 5632 3 445569999999 888 89999999999998753 3333 3 3333 35688
Q ss_pred ccCCCeEEEecCC---CcEEEEEcCCcceeeeccc-------------cCCceeEEEeCCC-CeEEEEeCCCcEEEEeCC
Q 022324 200 RYFDPEAVVGCED---GTARVFDMYSRKCSQIIRM-------------HCAPVTSLSLSED-QLIISGSSLGSIAISGLS 262 (299)
Q Consensus 200 ~~~~~~l~s~~~d---~~i~iwd~~~~~~~~~~~~-------------~~~~i~~~~~~~~-~~l~~~~~dg~i~iwd~~ 262 (299)
++++..+++++.| +.|++||+++++.+..+.. |...|.+++|+|+ ++|++++.||.|++||++
T Consensus 242 ~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~ 321 (397)
T 1sq9_A 242 SPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVK 321 (397)
T ss_dssp CSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETT
T ss_pred CCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcC
Confidence 9999999999999 9999999999999998887 9999999999999 999999999999999999
Q ss_pred CCceEEEee------cc---------------CCCCcEEEEEccCCC----------CeEEeeecc
Q 022324 263 SDQRVATLR------ST---------------DCTGHIICLMYPQFL----------HMLFFLCFL 297 (299)
Q Consensus 263 ~~~~~~~~~------~~---------------~~~~~i~~~~~s~~g----------~~l~s~s~~ 297 (299)
+++++..+. .| .. +|++++|+|+| ++|++|+.-
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~--~v~~~~~~~~g~~~~~~~~~~~~l~s~~~d 385 (397)
T 1sq9_A 322 TKERITTLNMHCDDIEIEEDILAVDEHGDSLAEP--GVFDVKFLKKGWRSGMGADLNESLCCVCLD 385 (397)
T ss_dssp TTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSC--CEEEEEEECTTTSBSTTCTTSCEEEEEETT
T ss_pred CCceeEEEecccCcccchhhhhccccccccccCC--ceeEEEeccccccccccccccceEEEecCC
Confidence 999999998 66 66 89999999998 799998854
No 54
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.96 E-value=4.1e-30 Score=219.65 Aligned_cols=253 Identities=9% Similarity=0.090 Sum_probs=199.7
Q ss_pred CCcchhccCcHHHHHH--HhhccCccchhhHHHhhhhHHHHhhhhhHHHHHHhhhcCCCCCCCchhhhhhhhhhhccccc
Q 022324 19 KPRATIESLNGDIICM--IFSSLGFFDLVRCSAVCKSWNAIINRCKLLQLLYCKLHGFSNTSGSSMRLHLEELAMKHHRF 96 (299)
Q Consensus 19 ~~~~~~~~~~~~~~~~--i~~~~~h~~~v~~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 96 (299)
..+..+++|+.+.... ......|.+.|.+++|+|+++++++ ...|+.+++|.. ....
T Consensus 42 ~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~----------------~~~dg~v~vw~~--~~~~--- 100 (416)
T 2pm9_A 42 STDSSLELWSLLAADSEKPIASLQVDSKFNDLDWSHNNKIIAG----------------ALDNGSLELYST--NEAN--- 100 (416)
T ss_dssp CCCCCCEEEESSSGGGCSCSCCCCCSSCEEEEEECSSSSCEEE----------------EESSSCEEEECC--SSTT---
T ss_pred CCCCeEEEEEccCCCCCcEEEEEecCCceEEEEECCCCCeEEE----------------EccCCeEEEeec--cccc---
Confidence 5677899999887652 3444579999999999999999986 225667777732 2110
Q ss_pred eeecCceeeEEeeccccCeeEEEe-cC-C-EEEEEeCCCcEEEEecCCce------eEEEe---cCCC-ceeEEEEecC-
Q 022324 97 ALEEGRIDIDQWKAHSVGVDQCRM-KR-G-LILTGVGDKVMRLWSLEGYK------CVEEY---SLPN-AASLVDFDFD- 162 (299)
Q Consensus 97 ~l~~g~~~~~~~~~h~~~i~~~~~-~~-~-~l~s~~~dg~i~iwd~~~~~------~~~~~---~~~~-~~~~~~~~~~- 162 (299)
.+...+..+.+|...|.++.| ++ + +|++++.||.|++||+.+++ ....+ ..|. .+..++|+|+
T Consensus 101 ---~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 177 (416)
T 2pm9_A 101 ---NAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSL 177 (416)
T ss_dssp ---SCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSC
T ss_pred ---ccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCC
Confidence 122346677899999999999 54 4 99999999999999999876 33322 3343 4556999999
Q ss_pred CCEEE-EEcCCeEEEEecCCceeee--eccC-----CccceeeeeccCCC-eEEEecCCC---cEEEEEcCCc-ceeeec
Q 022324 163 ESKIV-GLIGTRICIWRRNGLRSVF--PSRE-----GTFMKGLCMRYFDP-EAVVGCEDG---TARVFDMYSR-KCSQII 229 (299)
Q Consensus 163 ~~~l~-~~~d~~i~v~d~~~~~~~~--~~~~-----~~~~~~~~~~~~~~-~l~s~~~d~---~i~iwd~~~~-~~~~~~ 229 (299)
+.+++ ++.|+.|++||+++.+... ..+. ......+++++++. .+++++.|+ .|++||++++ +.+..+
T Consensus 178 ~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~ 257 (416)
T 2pm9_A 178 AHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTL 257 (416)
T ss_dssp TTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCC
T ss_pred CcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEe
Confidence 67777 8999999999999876332 2221 22233568888874 689999998 9999999986 567777
Q ss_pred c-ccCCceeEEEeCC-C-CeEEEEeCCCcEEEEeCCCCceEEEeeccCCCCcEEEEEccCCC-CeEEeeecc
Q 022324 230 R-MHCAPVTSLSLSE-D-QLIISGSSLGSIAISGLSSDQRVATLRSTDCTGHIICLMYPQFL-HMLFFLCFL 297 (299)
Q Consensus 230 ~-~~~~~i~~~~~~~-~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~g-~~l~s~s~~ 297 (299)
. .|...|.+++|+| + ++|++++.|+.|++||+++++++..+..|.. .|.+++|+|++ .+|++++.-
T Consensus 258 ~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~--~v~~~~~s~~~~~~l~s~~~d 327 (416)
T 2pm9_A 258 NQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGN--WCFKTKFAPEAPDLFACASFD 327 (416)
T ss_dssp CSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSS--CCCCEEECTTCTTEEEECCSS
T ss_pred ecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCC--ceEEEEECCCCCCEEEEEecC
Confidence 7 8999999999999 7 8999999999999999999999999999888 89999999999 899988753
No 55
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.96 E-value=4.9e-30 Score=219.61 Aligned_cols=251 Identities=13% Similarity=0.148 Sum_probs=193.4
Q ss_pred CCCCCcchhccCcHHHHHHHhhccCccchhhHHHhhhhHHHHhhhhhHHHHHHhhhcCCCCCCCchhhhhhhhhhhcccc
Q 022324 16 RSSKPRATIESLNGDIICMIFSSLGFFDLVRCSAVCKSWNAIINRCKLLQLLYCKLHGFSNTSGSSMRLHLEELAMKHHR 95 (299)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~i~~~~~h~~~v~~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 95 (299)
..+..+..+.+|+.........+..| ..+.+..++++++.+++ ...|+.+++| ++..
T Consensus 72 ~~~~~d~~v~i~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~----------------~~~dg~i~iw--d~~~---- 128 (420)
T 3vl1_A 72 YKARLDGHDFLFNTIIRDGSKMLKRA-DYTAVDTAKLQMRRFIL----------------GTTEGDIKVL--DSNF---- 128 (420)
T ss_dssp EEEEETTEEEEEECCSEETTTTSCSC-CEEEEEEECSSSCEEEE----------------EETTSCEEEE--CTTS----
T ss_pred EEEEcCCcEEEEEecccceeeEEecC-CceEEEEEecCCCEEEE----------------EECCCCEEEE--eCCC----
Confidence 33445667888988776655555555 55555678889888886 2256677777 3221
Q ss_pred ceeecCceeeEEeeccccCeeEEEe-cCC-EEEEEeCCCcEEEEecCCceeEEEecCCCceeE-EEEecCCCEEE-EEcC
Q 022324 96 FALEEGRIDIDQWKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNAASL-VDFDFDESKIV-GLIG 171 (299)
Q Consensus 96 ~~l~~g~~~~~~~~~h~~~i~~~~~-~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~-~~~d 171 (299)
......+.+|.+.|.++.| +++ +|++|+.|+.|++||+.+++.+..+..|...+. ++|+|+++.|+ ++.|
T Consensus 129 ------~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d 202 (420)
T 3vl1_A 129 ------NLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLD 202 (420)
T ss_dssp ------CEEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETT
T ss_pred ------cceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCC
Confidence 2224455799999999999 566 999999999999999999999999987765554 99999999999 9999
Q ss_pred CeEEEEecCCceee--eeccCC-----------------------ccceeeeeccCCCeEEEecCCCcEEEEEcCCccee
Q 022324 172 TRICIWRRNGLRSV--FPSREG-----------------------TFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCS 226 (299)
Q Consensus 172 ~~i~v~d~~~~~~~--~~~~~~-----------------------~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~ 226 (299)
+.|++||+++++.. +..+.. .....+++++++..+++++.||.|++||+++++.+
T Consensus 203 ~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~ 282 (420)
T 3vl1_A 203 GTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQT 282 (420)
T ss_dssp SCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEE
T ss_pred CcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCcee
Confidence 99999999987533 222111 11112467788888999999999999999998877
Q ss_pred eecc-ccCCceeEEEeCCC-C-eEEEEeCCCcEEEEeCCCCce-EEEeeccCCCCcEEEEEccCCCCeEEeeecc
Q 022324 227 QIIR-MHCAPVTSLSLSED-Q-LIISGSSLGSIAISGLSSDQR-VATLRSTDCTGHIICLMYPQFLHMLFFLCFL 297 (299)
Q Consensus 227 ~~~~-~~~~~i~~~~~~~~-~-~l~~~~~dg~i~iwd~~~~~~-~~~~~~~~~~~~i~~~~~s~~g~~l~s~s~~ 297 (299)
..+. .|...|.+++|+|+ . +|++|+.||.|++||+++++. +..+..++.. .|.++.+ +++++|++++.-
T Consensus 283 ~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~-~v~~~~~-~~~~~l~s~~~d 355 (420)
T 3vl1_A 283 IQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGT-PINNVYF-AAGALFVSSGFD 355 (420)
T ss_dssp EEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTS-CEEEEEE-ETTEEEEEETTT
T ss_pred EEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCC-CceEEEe-CCCCEEEEecCC
Confidence 6664 57889999999998 6 999999999999999998754 7788775543 7888855 578899998753
No 56
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.96 E-value=6e-30 Score=214.05 Aligned_cols=246 Identities=12% Similarity=0.130 Sum_probs=192.6
Q ss_pred cchhccCcHHHHHHHhh-ccCccchhhHHHhhhh---HHHHhhhhhHHHHHHhhhcCCCCCCCchhhhhhhhhhhccccc
Q 022324 21 RATIESLNGDIICMIFS-SLGFFDLVRCSAVCKS---WNAIINRCKLLQLLYCKLHGFSNTSGSSMRLHLEELAMKHHRF 96 (299)
Q Consensus 21 ~~~~~~~~~~~~~~i~~-~~~h~~~v~~~~~~~~---~~~l~~~~~~w~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 96 (299)
+..+.+|+.+....... ..+|.+.|.+++|+|+ ++++++ ...|+.+++|.. ...
T Consensus 43 d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~----------------~~~dg~i~iwd~--~~~---- 100 (357)
T 3i2n_A 43 TGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLAT----------------GDFGGNLHIWNL--EAP---- 100 (357)
T ss_dssp CEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEE----------------EETTSCEEEECT--TSC----
T ss_pred CcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEE----------------ecCCCeEEEEeC--CCC----
Confidence 67899999886553322 3389999999999998 688876 225677778732 222
Q ss_pred eeecCceeeEEeeccccCeeEEEe-------cCC-EEEEEeCCCcEEEEecCCce-eEEEecCCC-----ceeEEE----
Q 022324 97 ALEEGRIDIDQWKAHSVGVDQCRM-------KRG-LILTGVGDKVMRLWSLEGYK-CVEEYSLPN-----AASLVD---- 158 (299)
Q Consensus 97 ~l~~g~~~~~~~~~h~~~i~~~~~-------~~~-~l~s~~~dg~i~iwd~~~~~-~~~~~~~~~-----~~~~~~---- 158 (299)
...+..+.+|...|.++.| +++ +|++++.||.|++||+.+++ .+..+..+. .+..++
T Consensus 101 -----~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 175 (357)
T 3i2n_A 101 -----EMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNA 175 (357)
T ss_dssp -----SSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECC
T ss_pred -----CccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEec
Confidence 2234566899999999965 344 99999999999999999887 677776433 344466
Q ss_pred EecCCCEEE-EEcCCeEEEEecCCceeee-eccCCccceeeeecc---CCCeEEEecCCCcEEEEEcCCcceeeecc---
Q 022324 159 FDFDESKIV-GLIGTRICIWRRNGLRSVF-PSREGTFMKGLCMRY---FDPEAVVGCEDGTARVFDMYSRKCSQIIR--- 230 (299)
Q Consensus 159 ~~~~~~~l~-~~~d~~i~v~d~~~~~~~~-~~~~~~~~~~~~~~~---~~~~l~s~~~d~~i~iwd~~~~~~~~~~~--- 230 (299)
|+++++.++ ++.|+.|++||+++.+... ..+...+ ..+++++ ++..+++++.|+.|++||+++++.+..+.
T Consensus 176 ~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~v-~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~ 254 (357)
T 3i2n_A 176 YNQEERVVCAGYDNGDIKLFDLRNMALRWETNIKNGV-CSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVS 254 (357)
T ss_dssp CC-CCCEEEEEETTSEEEEEETTTTEEEEEEECSSCE-EEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEE
T ss_pred cCCCCCEEEEEccCCeEEEEECccCceeeecCCCCce-EEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeec
Confidence 678999999 9999999999999886433 3333333 3568888 78889999999999999999877665554
Q ss_pred --ccCCceeEEEeCCC-C-eEEEEeCCCcEEEEeCCCC-------------------ceEEEeeccCCCCcEEEEEccCC
Q 022324 231 --MHCAPVTSLSLSED-Q-LIISGSSLGSIAISGLSSD-------------------QRVATLRSTDCTGHIICLMYPQF 287 (299)
Q Consensus 231 --~~~~~i~~~~~~~~-~-~l~~~~~dg~i~iwd~~~~-------------------~~~~~~~~~~~~~~i~~~~~s~~ 287 (299)
.|...|.+++|+|+ . ++++++.||.|++||++++ +++..+..|.. +|++++|+|+
T Consensus 255 ~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~v~~~~~s~~ 332 (357)
T 3i2n_A 255 EKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQ--PISSLDWSPD 332 (357)
T ss_dssp EECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSS--CEEEEEECSS
T ss_pred cCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCC--CeeEEEEcCC
Confidence 89999999999998 6 8999999999999999754 46778888887 9999999999
Q ss_pred CCeEE-eeec
Q 022324 288 LHMLF-FLCF 296 (299)
Q Consensus 288 g~~l~-s~s~ 296 (299)
|++|+ +++.
T Consensus 333 ~~~l~~s~~~ 342 (357)
T 3i2n_A 333 KRGLCVCSSF 342 (357)
T ss_dssp STTEEEEEET
T ss_pred CCeEEEEecC
Confidence 99998 6774
No 57
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.96 E-value=4.5e-29 Score=230.60 Aligned_cols=253 Identities=17% Similarity=0.167 Sum_probs=208.4
Q ss_pred CCCCCCCCcchhccCcHHHHHHHhhccCccchhhHHHhhhhHHHHhhhhhHHHHHHhhhcCCCCCCCchhhhhhhhhhhc
Q 022324 13 PKKRSSKPRATIESLNGDIICMIFSSLGFFDLVRCSAVCKSWNAIINRCKLLQLLYCKLHGFSNTSGSSMRLHLEELAMK 92 (299)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~h~~~v~~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 92 (299)
+..+.+..+..+.+|+.+....+..+.+|.+.|++++|+|+++.+++ ...|+.+++|.. ..
T Consensus 26 ~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~----------------~~~dg~i~vw~~--~~- 86 (814)
T 3mkq_A 26 PWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIV----------------GSDDFRIRVFNY--NT- 86 (814)
T ss_dssp SEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEE----------------EETTSEEEEEET--TT-
T ss_pred CEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEE----------------EeCCCeEEEEEC--CC-
Confidence 34445556778999999888888888899999999999999999987 225677777732 21
Q ss_pred cccceeecCceeeEEeeccccCeeEEEe-cCC-EEEEEeCCCcEEEEecCCc-eeEEEecCCCc-eeEEEEec-CCCEEE
Q 022324 93 HHRFALEEGRIDIDQWKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGY-KCVEEYSLPNA-ASLVDFDF-DESKIV 167 (299)
Q Consensus 93 ~~~~~l~~g~~~~~~~~~h~~~i~~~~~-~~~-~l~s~~~dg~i~iwd~~~~-~~~~~~~~~~~-~~~~~~~~-~~~~l~ 167 (299)
...+..+.+|.+.|.++.| +++ +|++++.||.|++||+.++ .....+..|.. +..++|+| ++..++
T Consensus 87 ---------~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~ 157 (814)
T 3mkq_A 87 ---------GEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFA 157 (814)
T ss_dssp ---------CCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEE
T ss_pred ---------CcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEE
Confidence 2234566899999999999 566 9999999999999999987 67777777755 44599999 788888
Q ss_pred -EEcCCeEEEEecCCcee--eeeccCCccceeeeecc--CCCeEEEecCCCcEEEEEcCCcceeeeccccCCceeEEEeC
Q 022324 168 -GLIGTRICIWRRNGLRS--VFPSREGTFMKGLCMRY--FDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLS 242 (299)
Q Consensus 168 -~~~d~~i~v~d~~~~~~--~~~~~~~~~~~~~~~~~--~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~~~~~ 242 (299)
++.||.|++||+.+... .+..+.......+++++ +++.+++++.|+.|++||+++++.+..+..|...|.+++|+
T Consensus 158 ~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~ 237 (814)
T 3mkq_A 158 SGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFH 237 (814)
T ss_dssp EEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECCSSCEEEEEEC
T ss_pred EEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEc
Confidence 99999999999987653 33333322233568888 78889999999999999999999999998999999999999
Q ss_pred CC-CeEEEEeCCCcEEEEeCCCCceEEEeeccCCCCcEEEEEccCCCC--eEEeee
Q 022324 243 ED-QLIISGSSLGSIAISGLSSDQRVATLRSTDCTGHIICLMYPQFLH--MLFFLC 295 (299)
Q Consensus 243 ~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~g~--~l~s~s 295 (299)
|+ .++++++.||.|++||+.+++.+..+..+.. .+.+++|+|+|. ++++++
T Consensus 238 ~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~--~v~~~~~~~~~~~~~~~~~~ 291 (814)
T 3mkq_A 238 PTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLE--RSWCIATHPTGRKNYIASGF 291 (814)
T ss_dssp SSSSEEEEEETTSCEEEEETTTCSEEEEECCSSS--SEEEEEECTTCGGGEEEEEE
T ss_pred CCCCEEEEEeCCCeEEEEECCCCcEEEEeecCCC--cEEEEEEccCCCceEEEEEe
Confidence 99 8999999999999999999999999998887 899999999987 466554
No 58
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.96 E-value=4.9e-30 Score=219.60 Aligned_cols=252 Identities=13% Similarity=0.158 Sum_probs=192.7
Q ss_pred CCCCCCCCcchhccCcHHHHHHHhhccCccchhhHHHhhhhHHHHhhhhhHHHHHHhhhcCCCCCCCchhhhhhhhhhhc
Q 022324 13 PKKRSSKPRATIESLNGDIICMIFSSLGFFDLVRCSAVCKSWNAIINRCKLLQLLYCKLHGFSNTSGSSMRLHLEELAMK 92 (299)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~h~~~v~~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 92 (299)
+....+..+..+.+|+.+....+..+.+|.+.|.+++|+|+++++++ ...|+.+++| ++...
T Consensus 110 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s----------------~s~d~~i~iw--d~~~~ 171 (420)
T 3vl1_A 110 RRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALIS----------------SSQDMQLKIW--SVKDG 171 (420)
T ss_dssp CEEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEE----------------EETTSEEEEE--ETTTC
T ss_pred CEEEEEECCCCEEEEeCCCcceeeecccccCccEEEEECCCCCEEEE----------------EeCCCeEEEE--eCCCC
Confidence 34444556778999998876666566699999999999999998886 3356777888 33322
Q ss_pred cccceeecCceeeEEeeccccCeeEEEe-cCC-EEEEEeCCCcEEEEecCCceeEEEecCCC----ce------------
Q 022324 93 HHRFALEEGRIDIDQWKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEYSLPN----AA------------ 154 (299)
Q Consensus 93 ~~~~~l~~g~~~~~~~~~h~~~i~~~~~-~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~----~~------------ 154 (299)
. .+..+.+|...|.++.| +++ +|++++.||.|++||+.+++.+..+..+. .+
T Consensus 172 ~----------~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 241 (420)
T 3vl1_A 172 S----------NPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQ 241 (420)
T ss_dssp C----------CCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSS
T ss_pred c----------CceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcce
Confidence 2 24556899999999999 556 99999999999999999999998887431 12
Q ss_pred ---------eEEEEecCCCEEE-EEcCCeEEEEecCCceeeeec---cCCccceeeeeccCCC-eEEEecCCCcEEEEEc
Q 022324 155 ---------SLVDFDFDESKIV-GLIGTRICIWRRNGLRSVFPS---REGTFMKGLCMRYFDP-EAVVGCEDGTARVFDM 220 (299)
Q Consensus 155 ---------~~~~~~~~~~~l~-~~~d~~i~v~d~~~~~~~~~~---~~~~~~~~~~~~~~~~-~l~s~~~d~~i~iwd~ 220 (299)
..++|+|++++++ ++.||.|++||+++....... +... ...+++++++. .+++|+.||.|++||+
T Consensus 242 ~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~l~~g~~dg~i~vwd~ 320 (420)
T 3vl1_A 242 LHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCS-CNSLTVDGNNANYIYAGYENGMLAQWDL 320 (420)
T ss_dssp CGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSC-EEEEEECSSCTTEEEEEETTSEEEEEET
T ss_pred eeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccCCC-ceeEEEeCCCCCEEEEEeCCCeEEEEEc
Confidence 2245578888988 999999999999987644333 2333 33568889888 8999999999999999
Q ss_pred CCcce-eeeccc-cCCceeEEEeCCCCeEEEEeCCCcEEEEeCCCC---------ceEEEeeccCCCCcEEEEEccCCCC
Q 022324 221 YSRKC-SQIIRM-HCAPVTSLSLSEDQLIISGSSLGSIAISGLSSD---------QRVATLRSTDCTGHIICLMYPQFLH 289 (299)
Q Consensus 221 ~~~~~-~~~~~~-~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~---------~~~~~~~~~~~~~~i~~~~~s~~g~ 289 (299)
++++. +..+.. |...|.++.+.++++|++++.|+.|++||+... .....+..+.. .|.+++|+|+++
T Consensus 321 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~--~v~~~~~s~~~~ 398 (420)
T 3vl1_A 321 RSPECPVGEFLINEGTPINNVYFAAGALFVSSGFDTSIKLDIISDPESERPAIEFETPTFLVSNDD--AVSQFCYVSDDE 398 (420)
T ss_dssp TCTTSCSEEEEESTTSCEEEEEEETTEEEEEETTTEEEEEEEECCTTCCSCEECTTSCEEECCSSC--CCCEEEEECCSS
T ss_pred CCCcCchhhhhccCCCCceEEEeCCCCEEEEecCCccEEEEeccCCCCCccceeccCccEEccCCc--ceEEEEEccCCC
Confidence 98754 666665 677888887765589999999999999998763 22233445555 899999999999
Q ss_pred ---eEEeee
Q 022324 290 ---MLFFLC 295 (299)
Q Consensus 290 ---~l~s~s 295 (299)
.|++.+
T Consensus 399 ~~g~l~a~g 407 (420)
T 3vl1_A 399 SNGEVLEVG 407 (420)
T ss_dssp SSCEEEEEE
T ss_pred CcceEEEEc
Confidence 444443
No 59
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.96 E-value=9.2e-29 Score=210.41 Aligned_cols=257 Identities=9% Similarity=0.104 Sum_probs=194.0
Q ss_pred cchhccCcHHHHHHHhhccCccchhhHHHhhh-hHHHHhhhhhHHHHHHhhhcCCCCCCCchhhhhhhhhhhccccceee
Q 022324 21 RATIESLNGDIICMIFSSLGFFDLVRCSAVCK-SWNAIINRCKLLQLLYCKLHGFSNTSGSSMRLHLEELAMKHHRFALE 99 (299)
Q Consensus 21 ~~~~~~~~~~~~~~i~~~~~h~~~v~~~~~~~-~~~~l~~~~~~w~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~ 99 (299)
...+++|+.+.......+.+|.+.|.+++|+| +++++++ ...|+.+++| ++........+.
T Consensus 22 ~~~~~v~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~~l~~----------------~~~dg~i~iw--~~~~~~~~~~~~ 83 (408)
T 4a11_B 22 ESTRRVLGLELNKDRDVERIHGGGINTLDIEPVEGRYMLS----------------GGSDGVIVLY--DLENSSRQSYYT 83 (408)
T ss_dssp HHHHHHHTEEECTTEEECCCCSSCEEEEEECTTTCCEEEE----------------EETTSCEEEE--ECCCCSSSSCEE
T ss_pred cCcceeeccccCcceeeeeccCCcEEEEEEecCCCCEEEE----------------EcCCCeEEEE--ECCCCcccceEe
Confidence 34455666655555555668999999999999 9999987 2256777777 333222221111
Q ss_pred cCcee---eEEeeccccCeeEEEe-c-CC-EEEEEeCCCcEEEEecCCceeEEEecCCCceeEEEEecCC---CEEE-EE
Q 022324 100 EGRID---IDQWKAHSVGVDQCRM-K-RG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDE---SKIV-GL 169 (299)
Q Consensus 100 ~g~~~---~~~~~~h~~~i~~~~~-~-~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~---~~l~-~~ 169 (299)
..... .....+|...|.++.| + ++ +|++++.||.|++||+.+++.+..+.....+..+.+.+.+ .+++ ++
T Consensus 84 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (408)
T 4a11_B 84 CKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGT 163 (408)
T ss_dssp ECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEE
T ss_pred ccccccccccccccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEc
Confidence 00000 0111369999999999 5 44 9999999999999999999999999877777779998854 4777 99
Q ss_pred cCCeEEEEecCCce--eeeeccCCccceeeeeccCCCe-EEEecCCCcEEEEEcCCcc-eeeec---------------c
Q 022324 170 IGTRICIWRRNGLR--SVFPSREGTFMKGLCMRYFDPE-AVVGCEDGTARVFDMYSRK-CSQII---------------R 230 (299)
Q Consensus 170 ~d~~i~v~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~-l~s~~~d~~i~iwd~~~~~-~~~~~---------------~ 230 (299)
.++.|++||++++. ..+..+.+.+. .+++++++++ +++++.|+.|++||++++. .+..+ .
T Consensus 164 ~~~~v~~~d~~~~~~~~~~~~~~~~v~-~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (408)
T 4a11_B 164 RGPKVQLCDLKSGSCSHILQGHRQEIL-AVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANT 242 (408)
T ss_dssp SSSSEEEEESSSSCCCEEECCCCSCEE-EEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSC
T ss_pred CCCeEEEEeCCCcceeeeecCCCCcEE-EEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccc
Confidence 99999999998775 34444555444 5688999886 8899999999999998765 33333 4
Q ss_pred ccCCceeEEEeCCC-CeEEEEeCCCcEEEEeCCCC---------------------------------------------
Q 022324 231 MHCAPVTSLSLSED-QLIISGSSLGSIAISGLSSD--------------------------------------------- 264 (299)
Q Consensus 231 ~~~~~i~~~~~~~~-~~l~~~~~dg~i~iwd~~~~--------------------------------------------- 264 (299)
.|...|.+++|+|+ ++|++++.||.|++||++++
T Consensus 243 ~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~ 322 (408)
T 4a11_B 243 AHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVY 322 (408)
T ss_dssp SCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETT
T ss_pred cccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECc
Confidence 68889999999999 89999999999999998754
Q ss_pred --ceEEEeeccCCCCcEEEEEccCCCCeEEeeeccc
Q 022324 265 --QRVATLRSTDCTGHIICLMYPQFLHMLFFLCFLP 298 (299)
Q Consensus 265 --~~~~~~~~~~~~~~i~~~~~s~~g~~l~s~s~~~ 298 (299)
+++..+.+|.. .|++++|+|++++|++|+.-+
T Consensus 323 ~~~~~~~~~~~~~--~v~~~~~s~~~~~l~s~~~dg 356 (408)
T 4a11_B 323 SGEQITMLKGHYK--TVDCCVFQSNFQELYSGSRDC 356 (408)
T ss_dssp TCCEEEEECCCSS--CEEEEEEETTTTEEEEEETTS
T ss_pred CCcceeeeccCCC--eEEEEEEcCCCCEEEEECCCC
Confidence 34566667776 899999999999999998643
No 60
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.96 E-value=5.3e-29 Score=212.32 Aligned_cols=245 Identities=11% Similarity=0.073 Sum_probs=194.0
Q ss_pred cchhccCcHHHHHHHhhcc-CccchhhHHHhhhhHHHHhhhhhHHHHHHhhhcCCCCCCCchhhhhhhhhhhccccceee
Q 022324 21 RATIESLNGDIICMIFSSL-GFFDLVRCSAVCKSWNAIINRCKLLQLLYCKLHGFSNTSGSSMRLHLEELAMKHHRFALE 99 (299)
Q Consensus 21 ~~~~~~~~~~~~~~i~~~~-~h~~~v~~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~ 99 (299)
+..+.+|+.+.......+. +|.+.|.+++|+|+++++++ ...|+.+++| ++..
T Consensus 112 d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~----------------~~~dg~i~iw--d~~~-------- 165 (401)
T 4aez_A 112 ERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSV----------------GLGNGLVDIY--DVES-------- 165 (401)
T ss_dssp TTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEE----------------EETTSCEEEE--ETTT--------
T ss_pred CCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEE----------------ECCCCeEEEE--ECcC--------
Confidence 4567788887766544444 48889999999999998886 2246677777 3221
Q ss_pred cCceeeEEeeccccCeeEEEecCCEEEEEeCCCcEEEEecC-CceeEEEecCCCceeE-EEEecCCCEEE-EEcCCeEEE
Q 022324 100 EGRIDIDQWKAHSVGVDQCRMKRGLILTGVGDKVMRLWSLE-GYKCVEEYSLPNAASL-VDFDFDESKIV-GLIGTRICI 176 (299)
Q Consensus 100 ~g~~~~~~~~~h~~~i~~~~~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~~~~~~-~~~~~~~~~l~-~~~d~~i~v 176 (299)
...+..+.+|...|.++.|.+.+|++|+.||.|++||+. ....+..+..|...+. ++|+|+++.++ ++.|+.|++
T Consensus 166 --~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~i 243 (401)
T 4aez_A 166 --QTKLRTMAGHQARVGCLSWNRHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQI 243 (401)
T ss_dssp --CCEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred --CeEEEEecCCCCceEEEEECCCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEE
Confidence 223556689999999999977799999999999999998 5667777877765555 99999999999 999999999
Q ss_pred EecCCcee--eeeccCCccceeeeeccCCCe-EEEec--CCCcEEEEEcCCcceeeeccccCCceeEEEeCCC-CeEEE-
Q 022324 177 WRRNGLRS--VFPSREGTFMKGLCMRYFDPE-AVVGC--EDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIIS- 249 (299)
Q Consensus 177 ~d~~~~~~--~~~~~~~~~~~~~~~~~~~~~-l~s~~--~d~~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~-~~l~~- 249 (299)
||+++... .+..+...+. .+++++++.. +++++ .|+.|++||+++++.+..+. +...|.+++|+|+ +++++
T Consensus 244 wd~~~~~~~~~~~~~~~~v~-~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~ 321 (401)
T 4aez_A 244 WDARSSIPKFTKTNHNAAVK-AVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVD-AGSQVTSLIWSPHSKEIMST 321 (401)
T ss_dssp EETTCSSEEEEECCCSSCCC-EEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEE-CSSCEEEEEECSSSSEEEEE
T ss_pred ccCCCCCccEEecCCcceEE-EEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEe-CCCcEEEEEECCCCCeEEEE
Confidence 99998753 3344544444 5688887766 55544 79999999999999988884 6678999999999 88888
Q ss_pred -EeCCCcEEEEeCCCCceEEE--eeccCCCCcEEEEEccCCCCeEEeeecc
Q 022324 250 -GSSLGSIAISGLSSDQRVAT--LRSTDCTGHIICLMYPQFLHMLFFLCFL 297 (299)
Q Consensus 250 -~~~dg~i~iwd~~~~~~~~~--~~~~~~~~~i~~~~~s~~g~~l~s~s~~ 297 (299)
|+.||.|++||+++++.... +..|.. .|.+++|+|+|++|++++.-
T Consensus 322 ~g~~dg~i~v~~~~~~~~~~~~~~~~h~~--~v~~~~~s~dg~~l~s~~~d 370 (401)
T 4aez_A 322 HGFPDNNLSIWSYSSSGLTKQVDIPAHDT--RVLYSALSPDGRILSTAASD 370 (401)
T ss_dssp ECTTTCEEEEEEEETTEEEEEEEEECCSS--CCCEEEECTTSSEEEEECTT
T ss_pred eecCCCcEEEEecCCccceeEEEecCCCC--CEEEEEECCCCCEEEEEeCC
Confidence 44899999999998665544 567776 89999999999999999854
No 61
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.96 E-value=2.8e-29 Score=214.08 Aligned_cols=257 Identities=14% Similarity=0.049 Sum_probs=194.0
Q ss_pred CCCcchhccCcHHHH----HHHhhccCccchhhHHHhhh-hHHHHhhhhhHHHHHHhhhcCCCCCCCchhhhhhhhhhhc
Q 022324 18 SKPRATIESLNGDII----CMIFSSLGFFDLVRCSAVCK-SWNAIINRCKLLQLLYCKLHGFSNTSGSSMRLHLEELAMK 92 (299)
Q Consensus 18 ~~~~~~~~~~~~~~~----~~i~~~~~h~~~v~~~~~~~-~~~~l~~~~~~w~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 92 (299)
+..+..+.+|+.+.. ..+..+.+|.+.|.+++|+| +++++++ ...|+.+++|.. ...
T Consensus 53 ~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s----------------~s~dg~v~vw~~--~~~ 114 (402)
T 2aq5_A 53 ASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIAS----------------GSEDCTVMVWEI--PDG 114 (402)
T ss_dssp CSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEE----------------EETTSEEEEEEC--CTT
T ss_pred EcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEE----------------EeCCCeEEEEEc--cCC
Confidence 345677888886442 23445668999999999999 8888887 336777888832 222
Q ss_pred cccceeecCceeeEEeeccccCeeEEEe-cCC--EEEEEeCCCcEEEEecCCceeEEEe--cCCCce-eEEEEecCCCEE
Q 022324 93 HHRFALEEGRIDIDQWKAHSVGVDQCRM-KRG--LILTGVGDKVMRLWSLEGYKCVEEY--SLPNAA-SLVDFDFDESKI 166 (299)
Q Consensus 93 ~~~~~l~~g~~~~~~~~~h~~~i~~~~~-~~~--~l~s~~~dg~i~iwd~~~~~~~~~~--~~~~~~-~~~~~~~~~~~l 166 (299)
... ......+..+.+|...|.++.| +++ +|++++.||.|++||+.+++.+..+ ..|... ..++|+|+++.|
T Consensus 115 ~~~---~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 191 (402)
T 2aq5_A 115 GLV---LPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALI 191 (402)
T ss_dssp CCS---SCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCE
T ss_pred CCc---cccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEE
Confidence 111 1111335677899999999999 553 8999999999999999999999998 666544 459999999999
Q ss_pred E-EEcCCeEEEEecCCceee--e-eccCCccceeeeeccCCCeEEEe---cCCCcEEEEEcCCcce-eeecc-ccCCcee
Q 022324 167 V-GLIGTRICIWRRNGLRSV--F-PSREGTFMKGLCMRYFDPEAVVG---CEDGTARVFDMYSRKC-SQIIR-MHCAPVT 237 (299)
Q Consensus 167 ~-~~~d~~i~v~d~~~~~~~--~-~~~~~~~~~~~~~~~~~~~l~s~---~~d~~i~iwd~~~~~~-~~~~~-~~~~~i~ 237 (299)
+ ++.|+.|++||+++.... + ..+.+.....+++++++..+++| +.|+.|++||+++++. +.... .+...+.
T Consensus 192 ~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~ 271 (402)
T 2aq5_A 192 CTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVL 271 (402)
T ss_dssp EEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCE
T ss_pred EEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCcee
Confidence 8 999999999999987633 2 34444433456888988888888 7999999999998664 32222 5677899
Q ss_pred EEEeCCC-CeEE-EEeCCCcEEEEeCCCCce-EEEeeccCCCCcEEEEEccCCCCeEEeee
Q 022324 238 SLSLSED-QLII-SGSSLGSIAISGLSSDQR-VATLRSTDCTGHIICLMYPQFLHMLFFLC 295 (299)
Q Consensus 238 ~~~~~~~-~~l~-~~~~dg~i~iwd~~~~~~-~~~~~~~~~~~~i~~~~~s~~g~~l~s~s 295 (299)
+++|+|+ ++|+ +|+.||.|++||+.+++. +..+..+....+|.+++|+|++.++++++
T Consensus 272 ~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~~~~~~s~~ 332 (402)
T 2aq5_A 272 LPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSKESQRGMGYMPKRGLEVNKC 332 (402)
T ss_dssp EEEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEECCSSCCSEEEECCGGGSCGGGT
T ss_pred EEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccccCCcccceEEecccccceecc
Confidence 9999999 7775 566799999999998874 55555543222899999999999887643
No 62
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.96 E-value=1.5e-28 Score=208.77 Aligned_cols=233 Identities=10% Similarity=0.107 Sum_probs=185.7
Q ss_pred hccCccchhhHHHhhhhHHHHhhhhhHHHHHHhhhcCCCCCCCchhhhhhhhhhhccccceeecCceeeEEeeccccCee
Q 022324 37 SSLGFFDLVRCSAVCKSWNAIINRCKLLQLLYCKLHGFSNTSGSSMRLHLEELAMKHHRFALEEGRIDIDQWKAHSVGVD 116 (299)
Q Consensus 37 ~~~~h~~~v~~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~h~~~i~ 116 (299)
.+.+|.+.|.+++|+| +++++ ...|+.+++|.. ...... .....+..+.+|..+|.
T Consensus 11 ~~~~h~~~i~~~~~~~--~~l~s----------------~~~dg~i~iw~~--~~~~~~----~~~~~~~~~~~h~~~v~ 66 (397)
T 1sq9_A 11 AGKAHDADIFSVSACN--SFTVS----------------CSGDGYLKVWDN--KLLDNE----NPKDKSYSHFVHKSGLH 66 (397)
T ss_dssp ESSCSSSCEEEEEECS--SEEEE----------------EETTSEEEEEES--BCCTTC----CGGGGEEEEECCTTCEE
T ss_pred hhhhhhcCeEEEEecC--CeEEE----------------EcCCCEEEEEEC--CCcccc----cCCCcceEEecCCCcEE
Confidence 3458999999999999 66665 236677788832 222100 00112556689999999
Q ss_pred EEEe-cC--------CEEEEEeCCCcEEEEecCCcee-----EEEecCC------CceeEEEEe----cCCCE-EE-EEc
Q 022324 117 QCRM-KR--------GLILTGVGDKVMRLWSLEGYKC-----VEEYSLP------NAASLVDFD----FDESK-IV-GLI 170 (299)
Q Consensus 117 ~~~~-~~--------~~l~s~~~dg~i~iwd~~~~~~-----~~~~~~~------~~~~~~~~~----~~~~~-l~-~~~ 170 (299)
++.| ++ .+|++++.||.|++||+.+++. ...+..+ ..+..++|+ |+++. ++ ++.
T Consensus 67 ~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~ 146 (397)
T 1sq9_A 67 HVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDV 146 (397)
T ss_dssp EEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEET
T ss_pred EEEEecccccCCccccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeC
Confidence 9999 55 5899999999999999998886 7788777 556669999 99998 88 899
Q ss_pred CCeEEEEecCC------cee-------eee-------ccCCccceeeeeccCCCeEEEecCCCcEEEEEcCCcceeeecc
Q 022324 171 GTRICIWRRNG------LRS-------VFP-------SREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIR 230 (299)
Q Consensus 171 d~~i~v~d~~~------~~~-------~~~-------~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~ 230 (299)
|+.|++||+.+ ... .+. .+...+ ..+++++++ .+++++.|+.|++||+++++.+..+.
T Consensus 147 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~ 224 (397)
T 1sq9_A 147 KGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFA-TSVDISERG-LIATGFNNGTVQISELSTLRPLYNFE 224 (397)
T ss_dssp TSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCC-CEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEE
T ss_pred CCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCc-eEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEe
Confidence 99999999987 432 221 133333 356899999 99999999999999999999999888
Q ss_pred c---c---CCceeEEEeCCC-CeEEEEeCC---CcEEEEeCCCCceEEEeec-------------cCCCCcEEEEEccCC
Q 022324 231 M---H---CAPVTSLSLSED-QLIISGSSL---GSIAISGLSSDQRVATLRS-------------TDCTGHIICLMYPQF 287 (299)
Q Consensus 231 ~---~---~~~i~~~~~~~~-~~l~~~~~d---g~i~iwd~~~~~~~~~~~~-------------~~~~~~i~~~~~s~~ 287 (299)
. | ...|.+++|+|+ ++|++++.| +.|++||+++++.+..+.. |.. .|.+++|+|+
T Consensus 225 ~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~v~~~~~~~~ 302 (397)
T 1sq9_A 225 SQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSS--WVMSLSFNDS 302 (397)
T ss_dssp CCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSS--CEEEEEECSS
T ss_pred ccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCC--cEEEEEECCC
Confidence 8 8 999999999999 999999999 9999999999999999988 777 8999999999
Q ss_pred CCeEEeeecc
Q 022324 288 LHMLFFLCFL 297 (299)
Q Consensus 288 g~~l~s~s~~ 297 (299)
+++|++++.-
T Consensus 303 ~~~l~~~~~d 312 (397)
T 1sq9_A 303 GETLCSAGWD 312 (397)
T ss_dssp SSEEEEEETT
T ss_pred CCEEEEEeCC
Confidence 9999999853
No 63
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.96 E-value=1.9e-29 Score=211.62 Aligned_cols=246 Identities=14% Similarity=0.168 Sum_probs=189.9
Q ss_pred cchhccCcHHHHHHHhhccC-----ccchhhHHHhhhh----HHHHhhhhhHHHHHHhhhcCCCCCCCchhhhhhhhhhh
Q 022324 21 RATIESLNGDIICMIFSSLG-----FFDLVRCSAVCKS----WNAIINRCKLLQLLYCKLHGFSNTSGSSMRLHLEELAM 91 (299)
Q Consensus 21 ~~~~~~~~~~~~~~i~~~~~-----h~~~v~~~~~~~~----~~~l~~~~~~w~~~~~~~~~~~~~~d~~~~~~~~~~~~ 91 (299)
...+.+|+.+....+..+.. |.+.|.+++|+++ ++++++ ...|+.+++|.. ..
T Consensus 43 ~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~----------------~~~dg~i~v~d~--~~ 104 (366)
T 3k26_A 43 SNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAV----------------AGSRGIIRIINP--IT 104 (366)
T ss_dssp TTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEE----------------EETTCEEEEECT--TT
T ss_pred CCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEE----------------ecCCCEEEEEEc--hh
Confidence 45788999887665544432 5678999999999 456775 225677788832 22
Q ss_pred ccccceeecCceeeEEeeccccCeeEEEe-c-CC-EEEEEeCCCcEEEEecCCceeEEEe---cCCCc-eeEEEEecCCC
Q 022324 92 KHHRFALEEGRIDIDQWKAHSVGVDQCRM-K-RG-LILTGVGDKVMRLWSLEGYKCVEEY---SLPNA-ASLVDFDFDES 164 (299)
Q Consensus 92 ~~~~~~l~~g~~~~~~~~~h~~~i~~~~~-~-~~-~l~s~~~dg~i~iwd~~~~~~~~~~---~~~~~-~~~~~~~~~~~ 164 (299)
...+..+.+|...|.++.| + ++ +|++++.||.|++||+.+++.+..+ ..|.. +..++|+|+++
T Consensus 105 ----------~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 174 (366)
T 3k26_A 105 ----------MQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGE 174 (366)
T ss_dssp ----------CCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSS
T ss_pred ----------ceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECCCCC
Confidence 1234566899999999999 5 55 9999999999999999999999888 45554 45599999999
Q ss_pred EEE-EEcCCeEEEEecCCceee--eec----------------------------cCCccceeeeeccCCCeEEEecCCC
Q 022324 165 KIV-GLIGTRICIWRRNGLRSV--FPS----------------------------REGTFMKGLCMRYFDPEAVVGCEDG 213 (299)
Q Consensus 165 ~l~-~~~d~~i~v~d~~~~~~~--~~~----------------------------~~~~~~~~~~~~~~~~~l~s~~~d~ 213 (299)
.++ ++.|+.|++||+++.+.. +.. +... +.++.+.+..+++++.|+
T Consensus 175 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---v~~~~~~~~~l~~~~~d~ 251 (366)
T 3k26_A 175 KIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNY---VDCVRWLGDLILSKSCEN 251 (366)
T ss_dssp EEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSC---CCEEEEETTEEEEECSSS
T ss_pred EEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcce---EEEEEEcCCEEEEEecCC
Confidence 999 999999999999876421 111 3333 334444478899999999
Q ss_pred cEEEEEcCCcce--------------eeeccccCCceeEEEeCCC---CeEEEEeCCCcEEEEeCCCCc----eEEEeec
Q 022324 214 TARVFDMYSRKC--------------SQIIRMHCAPVTSLSLSED---QLIISGSSLGSIAISGLSSDQ----RVATLRS 272 (299)
Q Consensus 214 ~i~iwd~~~~~~--------------~~~~~~~~~~i~~~~~~~~---~~l~~~~~dg~i~iwd~~~~~----~~~~~~~ 272 (299)
.|++||+++++. +..+..|...|.+++|+|+ ++|++|+.||.|++||+++++ ....+..
T Consensus 252 ~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~ 331 (366)
T 3k26_A 252 AIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTH 331 (366)
T ss_dssp EEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGGGCEEEEECC
T ss_pred EEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCccccceEEcc
Confidence 999999987644 6667788889999999976 789999999999999999876 4447777
Q ss_pred cCCCCcEEEEEccCCCCeEEeeecc
Q 022324 273 TDCTGHIICLMYPQFLHMLFFLCFL 297 (299)
Q Consensus 273 ~~~~~~i~~~~~s~~g~~l~s~s~~ 297 (299)
|.....|++++|+|++++|++++.-
T Consensus 332 ~~~~~~v~~~~~s~~~~~l~s~~~d 356 (366)
T 3k26_A 332 HKCGAAIRQTSFSRDSSILIAVCDD 356 (366)
T ss_dssp TTCCSCEEEEEECTTSSEEEEEETT
T ss_pred cccCCceEEEEeCCCCCeEEEEeCC
Confidence 7322289999999999999999864
No 64
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.96 E-value=1.1e-28 Score=209.82 Aligned_cols=212 Identities=11% Similarity=0.042 Sum_probs=143.6
Q ss_pred CCchhhhhhhhhhhccccceeecCceeeEEeeccccCeeEEEe-c--------CC-EEEEEeCCCcEEEEecCCceeEEE
Q 022324 78 SGSSMRLHLEELAMKHHRFALEEGRIDIDQWKAHSVGVDQCRM-K--------RG-LILTGVGDKVMRLWSLEGYKCVEE 147 (299)
Q Consensus 78 ~d~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~h~~~i~~~~~-~--------~~-~l~s~~~dg~i~iwd~~~~~~~~~ 147 (299)
.|.++|+|.. ....... ...+..+.+|.+.|+++.| | ++ +|++|+.|++|+|||+.++.++..
T Consensus 109 ~d~~v~lw~~--~~~~~~~-----~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~ 181 (393)
T 4gq1_A 109 QDNTVRLIIT--KNETIIT-----QHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILA 181 (393)
T ss_dssp TTSCEEEEEE--ETTEEEE-----EEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEE
T ss_pred CCCcEEEEEC--CCCccce-----eeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeee
Confidence 6788888843 2211110 0113456899999999999 3 44 999999999999999988776655
Q ss_pred ec-CCCceeEEEEecCCC-EEE-EEcCCeEEEEecCCceeee---------------------------eccCCccceee
Q 022324 148 YS-LPNAASLVDFDFDES-KIV-GLIGTRICIWRRNGLRSVF---------------------------PSREGTFMKGL 197 (299)
Q Consensus 148 ~~-~~~~~~~~~~~~~~~-~l~-~~~d~~i~v~d~~~~~~~~---------------------------~~~~~~~~~~~ 197 (299)
+. ++..+..++|+|++. +|+ ++.|+.|++||+++++... ..+......+.
T Consensus 182 ~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~ 261 (393)
T 4gq1_A 182 GYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVR 261 (393)
T ss_dssp EEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEE
T ss_pred ecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeee
Confidence 54 556677799999875 566 9999999999998754211 11122222222
Q ss_pred eeccCCCeEEEecCCCcEEEEEcCCcceeeeccccCCceeEEE------------------eCC--C-CeEEEEeCCCcE
Q 022324 198 CMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLS------------------LSE--D-QLIISGSSLGSI 256 (299)
Q Consensus 198 ~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~~~------------------~~~--~-~~l~~~~~dg~i 256 (299)
-..+++..+++++.|+.+++||+..++....+..|...+..+. ++| + .++++|+.||.|
T Consensus 262 ~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V 341 (393)
T 4gq1_A 262 WIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLI 341 (393)
T ss_dssp EETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEE
T ss_pred eecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEECCCCEE
Confidence 2347788899999999999999988776655554443333332 332 2 367788899999
Q ss_pred EEEeCCCCceEEEeeccCCCCcEEEEEccCCCCeEEeeeccc
Q 022324 257 AISGLSSDQRVATLRSTDCTGHIICLMYPQFLHMLFFLCFLP 298 (299)
Q Consensus 257 ~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~s~s~~~ 298 (299)
++||+.+++++..+..+.. +|++++|+|||++||+++-.+
T Consensus 342 ~lwd~~~~~~~~~~~~~~~--~V~svafspdG~~LA~as~~G 381 (393)
T 4gq1_A 342 QLINTYEKDSNSIPIQLGM--PIVDFCWHQDGSHLAIATEGS 381 (393)
T ss_dssp EEEETTCTTCCEEEEECSS--CEEEEEECTTSSEEEEEESSE
T ss_pred EEEECCCCcEEEEecCCCC--cEEEEEEcCCCCEEEEEeCCC
Confidence 9999999999888888887 999999999999999998644
No 65
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.96 E-value=7.3e-28 Score=210.92 Aligned_cols=247 Identities=10% Similarity=-0.002 Sum_probs=176.6
Q ss_pred CccchhhHHHhhhhH---------HHHhhhhhHHHHHHhhhc---CCCCCCCchhhhhhhhhhhccccceeecCceeeEE
Q 022324 40 GFFDLVRCSAVCKSW---------NAIINRCKLLQLLYCKLH---GFSNTSGSSMRLHLEELAMKHHRFALEEGRIDIDQ 107 (299)
Q Consensus 40 ~h~~~v~~~~~~~~~---------~~l~~~~~~w~~~~~~~~---~~~~~~d~~~~~~~~~~~~~~~~~~l~~g~~~~~~ 107 (299)
.+.+.|.+++|+|+. +++|....--........ -.....|+++++|. +....... ....+
T Consensus 131 ~~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd--~~~~~~~~------~~~~~ 202 (524)
T 2j04_B 131 NVGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFK--MNTSTLHC------VKVQT 202 (524)
T ss_dssp ECCC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEE--EETTTCCE------EEEEE
T ss_pred ECCCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEE--ccCCCCCc------eEEEE
Confidence 467789999999987 667651100000000000 00122677788883 22211100 01234
Q ss_pred eeccccCeeEEEe-cC-------CEEEEEeCCCcEEEEecCCcee-----------EEEecCCCc-eeEEEEecCCCEEE
Q 022324 108 WKAHSVGVDQCRM-KR-------GLILTGVGDKVMRLWSLEGYKC-----------VEEYSLPNA-ASLVDFDFDESKIV 167 (299)
Q Consensus 108 ~~~h~~~i~~~~~-~~-------~~l~s~~~dg~i~iwd~~~~~~-----------~~~~~~~~~-~~~~~~~~~~~~l~ 167 (299)
+.+|.+.|.++.| |+ ++|++++.||+|++||+.+++. ...+..|.. +.+++|++++ .|+
T Consensus 203 l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~-~la 281 (524)
T 2j04_B 203 IVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPT-TVV 281 (524)
T ss_dssp EEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSS-EEE
T ss_pred EEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCC-eEE
Confidence 5778899999999 53 3999999999999999986642 235566654 4459999865 666
Q ss_pred -EEcCCeEEEEecCCce---eeeeccCCcccee-eeeccCC-CeEEEecCCCcEEEEEcCCcceeeeccccCC--ceeEE
Q 022324 168 -GLIGTRICIWRRNGLR---SVFPSREGTFMKG-LCMRYFD-PEAVVGCEDGTARVFDMYSRKCSQIIRMHCA--PVTSL 239 (299)
Q Consensus 168 -~~~d~~i~v~d~~~~~---~~~~~~~~~~~~~-~~~~~~~-~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~--~i~~~ 239 (299)
|+.||+|++||++++. ..+..|.+.+..+ .++++++ ..|++++.|++|++||+++++.+..+.+|.. .|.++
T Consensus 282 sgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v 361 (524)
T 2j04_B 282 CGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPV 361 (524)
T ss_dssp EEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCCCE
T ss_pred EEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCcccce
Confidence 9999999999998653 3456676665544 2456666 6799999999999999999887777666643 58899
Q ss_pred EeCCC-CeEEEEeCCCcEEEEeCCCCceEEEeeccCCCCcEEEEEccCCCCeEEeeecc
Q 022324 240 SLSED-QLIISGSSLGSIAISGLSSDQRVATLRSTDCTGHIICLMYPQFLHMLFFLCFL 297 (299)
Q Consensus 240 ~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~s~s~~ 297 (299)
+|+|+ +.+++++.|++|++||++++.++.++.+|.. .|++++|+|+|++|++||.-
T Consensus 362 ~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~--~V~sva~Sp~g~~l~Sgs~D 418 (524)
T 2j04_B 362 VYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRET--TITAIGVSRLHPMVLAGSAD 418 (524)
T ss_dssp EEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECSS--CEEEEECCSSCCBCEEEETT
T ss_pred EeCCCcCeEEEeCCCCcEEEEECcccccceeeecCCC--ceEEEEeCCCCCeEEEEECC
Confidence 99998 8999999999999999999999889999988 99999999999999999864
No 66
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.96 E-value=7e-29 Score=210.10 Aligned_cols=250 Identities=13% Similarity=0.057 Sum_probs=189.7
Q ss_pred CCCCCCCCcchhccCcHHHHHHHhhc--cCccchhhHHHhhh-hHHHHhhhhhHHHHHHhhhcCCCCCCCchhhhhhhhh
Q 022324 13 PKKRSSKPRATIESLNGDIICMIFSS--LGFFDLVRCSAVCK-SWNAIINRCKLLQLLYCKLHGFSNTSGSSMRLHLEEL 89 (299)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~i~~~--~~h~~~v~~~~~~~-~~~~l~~~~~~w~~~~~~~~~~~~~~d~~~~~~~~~~ 89 (299)
+....+..+..+++|+.+.......+ .+|.+.|.+++|+| +++.+++ ...|+.+++| ++
T Consensus 87 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s----------------~~~d~~i~iw--d~ 148 (383)
T 3ei3_B 87 TTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFV----------------SSIRGATTLR--DF 148 (383)
T ss_dssp TEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEE----------------EETTTEEEEE--ET
T ss_pred CEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEE----------------EeCCCEEEEE--EC
Confidence 34455556778999998876644443 37999999999999 6788876 2356777888 32
Q ss_pred hhccccceeecCceeeEEe---eccccCeeEEEe-cCC-EEEEEeCCCcEEEEecCCceeEEEecCCCcee-EEEEecCC
Q 022324 90 AMKHHRFALEEGRIDIDQW---KAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNAAS-LVDFDFDE 163 (299)
Q Consensus 90 ~~~~~~~~l~~g~~~~~~~---~~h~~~i~~~~~-~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~-~~~~~~~~ 163 (299)
.. ..+..+ .+|...|.++.| +++ +|++|+.|+.|++||+ +++.+..+..|...+ .++|+|++
T Consensus 149 ~~-----------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v~~~~~~~~~ 216 (383)
T 3ei3_B 149 SG-----------SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKVTHAEFNPRC 216 (383)
T ss_dssp TS-----------CEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEECSSSCEEEEEECSSC
T ss_pred CC-----------CceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEeccCCCcEEEEEECCCC
Confidence 21 122223 345588999999 555 9999999999999999 577888888776555 49999999
Q ss_pred C-EEE-EEcCCeEEEEecCC----cee-eeeccCCccceeeeecc-CCCeEEEecCCCcEEEEEcCCcceeeeccccC--
Q 022324 164 S-KIV-GLIGTRICIWRRNG----LRS-VFPSREGTFMKGLCMRY-FDPEAVVGCEDGTARVFDMYSRKCSQIIRMHC-- 233 (299)
Q Consensus 164 ~-~l~-~~~d~~i~v~d~~~----~~~-~~~~~~~~~~~~~~~~~-~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-- 233 (299)
+ +++ ++.|+.|++||+++ ... ....+...+. .+++++ ++..+++++.|+.|++||+++++....+..|.
T Consensus 217 ~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~-~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~ 295 (383)
T 3ei3_B 217 DWLMATSSVDATVKLWDLRNIKDKNSYIAEMPHEKPVN-AAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHR 295 (383)
T ss_dssp TTEEEEEETTSEEEEEEGGGCCSTTCEEEEEECSSCEE-EEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBC
T ss_pred CCEEEEEeCCCEEEEEeCCCCCcccceEEEecCCCceE-EEEEcCCCCCEEEEEcCCCcEEEEECCCCcccccccccccc
Confidence 8 777 99999999999986 222 1223444433 568888 88899999999999999999887766665332
Q ss_pred ---------------CceeEEEeCCC-CeEEEEeCCCcEEEEeCCCCceEEEeeccCCCCcEEEEEccCCCCeEEeee
Q 022324 234 ---------------APVTSLSLSED-QLIISGSSLGSIAISGLSSDQRVATLRSTDCTGHIICLMYPQFLHMLFFLC 295 (299)
Q Consensus 234 ---------------~~i~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~s~s 295 (299)
..+..++++|+ ++ +|+.|+.|++||+.+++++..+..+.....+..++|+|+|++|++|+
T Consensus 296 ~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~~g~~l~s~s 371 (383)
T 3ei3_B 296 QFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKFSPTGDVLASGM 371 (383)
T ss_dssp CCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCEEEEECBTTBCSCCCEEEECTTSSEEEEEE
T ss_pred ccccccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCceeeeecCCCCCceEEEEEEecCccEEEEec
Confidence 33445777777 54 78899999999999999999998754222778889999999999997
No 67
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.96 E-value=3.6e-29 Score=213.96 Aligned_cols=253 Identities=10% Similarity=0.053 Sum_probs=200.8
Q ss_pred CCCCCCcchhccCcHHHHHHHhhccCccchhhHHHhhhhHHHHhhhhhHHHHHHhhhcCCCCCCCchhhhhhhhhhhccc
Q 022324 15 KRSSKPRATIESLNGDIICMIFSSLGFFDLVRCSAVCKSWNAIINRCKLLQLLYCKLHGFSNTSGSSMRLHLEELAMKHH 94 (299)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~i~~~~~h~~~v~~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 94 (299)
...+..+..+.+|+ .....+..+..|...|.+++|+|+++++++ ...|+.+++| ++....
T Consensus 123 l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~----------------~~~d~~i~iw--d~~~~~- 182 (425)
T 1r5m_A 123 IVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIIS----------------MDVENVTILW--NVISGT- 182 (425)
T ss_dssp EEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEE----------------EETTCCEEEE--ETTTTE-
T ss_pred EEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEE----------------EecCCeEEEE--ECCCCc-
Confidence 34444567888998 444556667789999999999999998886 2245666777 332222
Q ss_pred cceeecCceeeEEeeccccC---------------eeEEEe-cCCEEEEEeCCCcEEEEecCCceeEEEecCCCcee-EE
Q 022324 95 RFALEEGRIDIDQWKAHSVG---------------VDQCRM-KRGLILTGVGDKVMRLWSLEGYKCVEEYSLPNAAS-LV 157 (299)
Q Consensus 95 ~~~l~~g~~~~~~~~~h~~~---------------i~~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~-~~ 157 (299)
.+..+..|... +.++.| +++.+++++.||.|++||+.+++.+..+..|...+ .+
T Consensus 183 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~ 253 (425)
T 1r5m_A 183 ---------VMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVL 253 (425)
T ss_dssp ---------EEEEECCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEE
T ss_pred ---------EEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEE
Confidence 22333444444 888888 66699999999999999999999988888776555 49
Q ss_pred EEecCCCEEE-EEcCCeEEEEecCCce--eeeeccCCccceeeeeccCCCeEEEecCCCcEEEEEcCCcceeeeccccCC
Q 022324 158 DFDFDESKIV-GLIGTRICIWRRNGLR--SVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCA 234 (299)
Q Consensus 158 ~~~~~~~~l~-~~~d~~i~v~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~ 234 (299)
+|+|++++++ ++.|+.|++||+++.. ..+..+...+. .+++++++ .+++++.|+.|++||+++++.+..+..|..
T Consensus 254 ~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~-~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~ 331 (425)
T 1r5m_A 254 EFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYGHSQSIV-SASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIVDGV 331 (425)
T ss_dssp EEETTTTEEEEEETTSCEEEECSSSBSCSEEECCCSSCEE-EEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEECTTC
T ss_pred EECCCCCEEEEEcCCCEEEEEECCCCccceEecCCCccEE-EEEECCCC-EEEEEeCCCcEEEEECCCCcEeEecccCCc
Confidence 9999999998 9999999999998765 33444444433 46788888 899999999999999999999999988999
Q ss_pred ceeEEEeCCC-CeEEEEeCCCcEEEEeCCCCc--------------------eEEEeeccCCCCcEEEEEccCCCCeEEe
Q 022324 235 PVTSLSLSED-QLIISGSSLGSIAISGLSSDQ--------------------RVATLRSTDCTGHIICLMYPQFLHMLFF 293 (299)
Q Consensus 235 ~i~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~--------------------~~~~~~~~~~~~~i~~~~~s~~g~~l~s 293 (299)
.|.+++|+|+ ++|++++.||.|++||+++++ ++..+..+.....|++++|+|++++|++
T Consensus 332 ~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~ 411 (425)
T 1r5m_A 332 PIFAGRISQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISV 411 (425)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEE
T ss_pred cEEEEEEcCCCCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEE
Confidence 9999999999 999999999999999999888 8888888743226999999999999999
Q ss_pred eeccc
Q 022324 294 LCFLP 298 (299)
Q Consensus 294 ~s~~~ 298 (299)
++.-+
T Consensus 412 ~~~dg 416 (425)
T 1r5m_A 412 AYSLQ 416 (425)
T ss_dssp EESSS
T ss_pred EecCc
Confidence 87543
No 68
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1e-29 Score=217.19 Aligned_cols=260 Identities=9% Similarity=0.027 Sum_probs=196.3
Q ss_pred CCCCCCcchhccCcHHH----HHHHhhccCccchhhHHHhhhh-HHHHhhhhhHHHHHHhhhcCCCCCCCchhhhhhhhh
Q 022324 15 KRSSKPRATIESLNGDI----ICMIFSSLGFFDLVRCSAVCKS-WNAIINRCKLLQLLYCKLHGFSNTSGSSMRLHLEEL 89 (299)
Q Consensus 15 ~~~~~~~~~~~~~~~~~----~~~i~~~~~h~~~v~~~~~~~~-~~~l~~~~~~w~~~~~~~~~~~~~~d~~~~~~~~~~ 89 (299)
...+..+..+++|+.+. ...+..+.+|.+.|.+++|+|+ ++++++ ...|+.+++| ++
T Consensus 82 l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s----------------~~~dg~v~iw--d~ 143 (416)
T 2pm9_A 82 IAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLAS----------------GGNNGEIFIW--DM 143 (416)
T ss_dssp EEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEE----------------ECSSSCEEBC--BT
T ss_pred EEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEE----------------EcCCCeEEEE--EC
Confidence 33344567888998876 2356667789999999999998 787876 3356777777 33
Q ss_pred hhccccceeecCceeeEEeeccccCeeEEEe-cC-C-EEEEEeCCCcEEEEecCCceeEEEecCC-------CceeEEEE
Q 022324 90 AMKHHRFALEEGRIDIDQWKAHSVGVDQCRM-KR-G-LILTGVGDKVMRLWSLEGYKCVEEYSLP-------NAASLVDF 159 (299)
Q Consensus 90 ~~~~~~~~l~~g~~~~~~~~~h~~~i~~~~~-~~-~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~-------~~~~~~~~ 159 (299)
........ .........+.+|...|.++.| ++ + +|++++.||.|++||+.+++.+..+..+ ..+..++|
T Consensus 144 ~~~~~~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 222 (416)
T 2pm9_A 144 NKCTESPS-NYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEW 222 (416)
T ss_dssp TTTSSCTT-TCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEE
T ss_pred CCCccccc-cccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEE
Confidence 33220000 0000011233689999999999 55 4 9999999999999999999999888864 34555999
Q ss_pred ecCC-CEEE-EEcCC---eEEEEecCCce---eeee-ccCCccceeeeecc-CCCeEEEecCCCcEEEEEcCCcceeeec
Q 022324 160 DFDE-SKIV-GLIGT---RICIWRRNGLR---SVFP-SREGTFMKGLCMRY-FDPEAVVGCEDGTARVFDMYSRKCSQII 229 (299)
Q Consensus 160 ~~~~-~~l~-~~~d~---~i~v~d~~~~~---~~~~-~~~~~~~~~~~~~~-~~~~l~s~~~d~~i~iwd~~~~~~~~~~ 229 (299)
+|++ .+++ ++.|+ .|++||+++.. ..+. .+...+. .++|++ ++..+++++.|+.|++||+++++.+..+
T Consensus 223 ~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~-~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~ 301 (416)
T 2pm9_A 223 HPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGIL-SLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQF 301 (416)
T ss_dssp CSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEE-EEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEE
T ss_pred CCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCcee-EEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceee
Confidence 9997 5677 88888 99999998753 2333 3444433 457888 7788999999999999999999999999
Q ss_pred cccCCceeEEEeCCC--CeEEEEeCCCcEEEEeCCCCceEEEeec-----------------------------------
Q 022324 230 RMHCAPVTSLSLSED--QLIISGSSLGSIAISGLSSDQRVATLRS----------------------------------- 272 (299)
Q Consensus 230 ~~~~~~i~~~~~~~~--~~l~~~~~dg~i~iwd~~~~~~~~~~~~----------------------------------- 272 (299)
..|...|.+++|+|+ .+|++++.|+.|++||+.+++.......
T Consensus 302 ~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (416)
T 2pm9_A 302 PARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPSVFHLQAPTW 381 (416)
T ss_dssp ECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCSSCC----------------------CCSCCCSSCCCCCST
T ss_pred cCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCCcccccccccccCCcccccccccccccccccccccccCCcc
Confidence 999999999999997 6999999999999999987653322111
Q ss_pred cCCCCcEEEEEccCCCCeEEeeec
Q 022324 273 TDCTGHIICLMYPQFLHMLFFLCF 296 (299)
Q Consensus 273 ~~~~~~i~~~~~s~~g~~l~s~s~ 296 (299)
+.. ++.+++|+|+|++|++++.
T Consensus 382 ~~~--~~~~~~~s~dg~~la~~~~ 403 (416)
T 2pm9_A 382 YGE--PSPAAHWAFGGKLVQITPD 403 (416)
T ss_dssp TCC--CSCCCEEETTTEEECBCTT
T ss_pred ccC--CccceEEeeCCeEEEEeCC
Confidence 233 7789999999999999874
No 69
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.96 E-value=4.2e-26 Score=189.50 Aligned_cols=191 Identities=13% Similarity=0.033 Sum_probs=158.2
Q ss_pred eEEeeccccCeeEEEe-cC-C-EEEEEeCCCcEEEEecCCc-----eeEEEecCCCceeE-EEEecCCCEEE-EEcCCeE
Q 022324 105 IDQWKAHSVGVDQCRM-KR-G-LILTGVGDKVMRLWSLEGY-----KCVEEYSLPNAASL-VDFDFDESKIV-GLIGTRI 174 (299)
Q Consensus 105 ~~~~~~h~~~i~~~~~-~~-~-~l~s~~~dg~i~iwd~~~~-----~~~~~~~~~~~~~~-~~~~~~~~~l~-~~~d~~i 174 (299)
..+|+||++.|++++| |+ + +|+||+.|++|++||+.+. .+...+.+|...+. ++|+|++++++ ++.|+.|
T Consensus 31 ~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i 110 (340)
T 4aow_A 31 RGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTL 110 (340)
T ss_dssp EEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred EEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccc
Confidence 3468999999999999 54 3 9999999999999998754 35667777766555 99999999999 9999999
Q ss_pred EEEecCCceeeee-ccCCccceeeeeccCCCeEEEecCCCcEEEEEcCCcce-eeeccccCCceeEEEeCCC---CeEEE
Q 022324 175 CIWRRNGLRSVFP-SREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKC-SQIIRMHCAPVTSLSLSED---QLIIS 249 (299)
Q Consensus 175 ~v~d~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~-~~~~~~~~~~i~~~~~~~~---~~l~~ 249 (299)
++|+......... ...........+.+.+..+++++.|+.+++||...... ......|...+..++|+++ .++++
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s 190 (340)
T 4aow_A 111 RLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVS 190 (340)
T ss_dssp EEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEE
T ss_pred eEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEE
Confidence 9999988753322 22222333557788888899999999999999986544 3445578899999999875 57899
Q ss_pred EeCCCcEEEEeCCCCceEEEeeccCCCCcEEEEEccCCCCeEEeeecc
Q 022324 250 GSSLGSIAISGLSSDQRVATLRSTDCTGHIICLMYPQFLHMLFFLCFL 297 (299)
Q Consensus 250 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~s~s~~ 297 (299)
++.|+.|++||+++++++..+.+|.. +|++++|+|++++|++|+.-
T Consensus 191 ~~~d~~i~i~d~~~~~~~~~~~~h~~--~v~~~~~s~~~~~l~s~s~D 236 (340)
T 4aow_A 191 CGWDKLVKVWNLANCKLKTNHIGHTG--YLNTVTVSPDGSLCASGGKD 236 (340)
T ss_dssp EETTSCEEEEETTTTEEEEEECCCSS--CEEEEEECTTSSEEEEEETT
T ss_pred EcCCCEEEEEECCCCceeeEecCCCC--cEEEEEECCCCCEEEEEeCC
Confidence 99999999999999999999999988 99999999999999999853
No 70
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.96 E-value=8.7e-28 Score=197.84 Aligned_cols=246 Identities=13% Similarity=0.115 Sum_probs=194.8
Q ss_pred CcchhccCcHHHHHHHh--hccCccchhhHHHhhhhHHHHhhhhhHHHHHHhhhcCCCCCCCchhhhhhhhhhhccccce
Q 022324 20 PRATIESLNGDIICMIF--SSLGFFDLVRCSAVCKSWNAIINRCKLLQLLYCKLHGFSNTSGSSMRLHLEELAMKHHRFA 97 (299)
Q Consensus 20 ~~~~~~~~~~~~~~~i~--~~~~h~~~v~~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 97 (299)
.+.++++|+.+++..+. .+.+|...|++++|+|+++++++ ...|+.+++|.. ..
T Consensus 43 ~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~s----------------gs~Dg~v~iw~~--~~------ 98 (318)
T 4ggc_A 43 LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAV----------------GTSSAEVQLWDV--QQ------ 98 (318)
T ss_dssp ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEE----------------EETTSEEEEEET--TT------
T ss_pred eCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEE----------------EECCCcEEEeec--CC------
Confidence 46789999999876444 44478889999999999999987 346788888832 22
Q ss_pred eecCceeeEEeeccccCeeEEEecCCEEEEEeCCCcEEEEecCCc-eeEEEecCCCceeE-EEEecCCCEEE-EEcCCeE
Q 022324 98 LEEGRIDIDQWKAHSVGVDQCRMKRGLILTGVGDKVMRLWSLEGY-KCVEEYSLPNAASL-VDFDFDESKIV-GLIGTRI 174 (299)
Q Consensus 98 l~~g~~~~~~~~~h~~~i~~~~~~~~~l~s~~~dg~i~iwd~~~~-~~~~~~~~~~~~~~-~~~~~~~~~l~-~~~d~~i 174 (299)
...++.+.+|...+.++.+.+..+++++.++.+++|+..+. ..+..+..|...+. +.+.+++++++ ++.|+.|
T Consensus 99 ----~~~~~~~~~h~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i 174 (318)
T 4ggc_A 99 ----QKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLV 174 (318)
T ss_dssp ----TEEEEEEECCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred ----ceeEEEecCccceEEEeecCCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcce
Confidence 22355668999999988887779999999999999998865 45566677665554 99999999999 9999999
Q ss_pred EEEecCCcee------eeeccCCccceeeeeccCCCe---EEEecCCCcEEEEEcCCcceeeeccccCCceeEEEeCCC-
Q 022324 175 CIWRRNGLRS------VFPSREGTFMKGLCMRYFDPE---AVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED- 244 (299)
Q Consensus 175 ~v~d~~~~~~------~~~~~~~~~~~~~~~~~~~~~---l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~- 244 (299)
++||+++++. ....+.+.+. ..++.+.+.. +++++.++.|++||.+........ .+...+..+.++|+
T Consensus 175 ~iwd~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~-~~~~~v~~~~~~~~~ 252 (318)
T 4ggc_A 175 NVWPSAPGEGGWVPLQTFTQHQGAVK-AVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAV-DAHSQVCSILWSPHY 252 (318)
T ss_dssp EEEESSCBTTBSCCSEEECCCCSCEE-EEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEE-ECSSCEEEEEEETTT
T ss_pred eEEECCCCcccccceeeecccCCceE-EEEecCCCCcEEEEEecCCCCEEEEEecccccccccc-cceeeeeeeeecccc
Confidence 9999987641 1222333333 3466666665 346788999999999988776665 56777999999998
Q ss_pred CeEEEE--eCCCcEEEEeCCCCceEEEeeccCCCCcEEEEEccCCCCeEEeeecc
Q 022324 245 QLIISG--SSLGSIAISGLSSDQRVATLRSTDCTGHIICLMYPQFLHMLFFLCFL 297 (299)
Q Consensus 245 ~~l~~~--~~dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~s~s~~ 297 (299)
..++++ +.|+.|++||+++++++.++.+|.. +|++++|+|+|++|++||.-
T Consensus 253 ~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~--~V~~l~~spdg~~l~S~s~D 305 (318)
T 4ggc_A 253 KELISGHGFAQNQLVIWKYPTMAKVAELKGHTS--RVLSLTMSPDGATVASAAAD 305 (318)
T ss_dssp TEEEEEECTTTCCEEEEETTTCCEEEEECCCSS--CEEEEEECTTSSCEEEEETT
T ss_pred cceEEEEEcCCCEEEEEECCCCcEEEEEcCCCC--CEEEEEEcCCCCEEEEEecC
Confidence 666654 4799999999999999999999988 99999999999999999864
No 71
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.96 E-value=2.1e-27 Score=196.10 Aligned_cols=188 Identities=11% Similarity=0.140 Sum_probs=148.6
Q ss_pred EeeccccCeeEEEe-cCC-EEEEEeCCCcEEEEecCCce--eEEEecCCCceeE-EEEec--CCCEEE-EEcCCeEEEEe
Q 022324 107 QWKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYK--CVEEYSLPNAASL-VDFDF--DESKIV-GLIGTRICIWR 178 (299)
Q Consensus 107 ~~~~h~~~i~~~~~-~~~-~l~s~~~dg~i~iwd~~~~~--~~~~~~~~~~~~~-~~~~~--~~~~l~-~~~d~~i~v~d 178 (299)
.+.+|.+.|+++.| +++ +|++|+.|++|++||+.+++ .+..+.+|...+. ++|++ ++++|+ ++.|++|++||
T Consensus 8 ~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd 87 (316)
T 3bg1_A 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWR 87 (316)
T ss_dssp ------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEEC
T ss_pred ecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEE
Confidence 34799999999999 555 99999999999999998775 4667888865554 99975 478888 99999999999
Q ss_pred cCCce----eeeeccCCccceeeeeccC--CCeEEEecCCCcEEEEEcCCcce---eeeccccCCceeEEEeCCC-----
Q 022324 179 RNGLR----SVFPSREGTFMKGLCMRYF--DPEAVVGCEDGTARVFDMYSRKC---SQIIRMHCAPVTSLSLSED----- 244 (299)
Q Consensus 179 ~~~~~----~~~~~~~~~~~~~~~~~~~--~~~l~s~~~d~~i~iwd~~~~~~---~~~~~~~~~~i~~~~~~~~----- 244 (299)
++++. ..+..|...+. .++|+|+ +..+++|+.|+.|++||++.+.. ...+..|...|.+++|+|+
T Consensus 88 ~~~~~~~~~~~~~~h~~~V~-~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~ 166 (316)
T 3bg1_A 88 EENGTWEKSHEHAGHDSSVN-SVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGS 166 (316)
T ss_dssp CSSSCCCEEEEECCCSSCCC-EEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC--
T ss_pred CCCCcceEEEEccCCCCceE-EEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCcc
Confidence 98753 23344555544 4588887 56799999999999999987532 3455688899999999986
Q ss_pred -------------CeEEEEeCCCcEEEEeCCCC---ceEEEeeccCCCCcEEEEEccCCC----CeEEeeecc
Q 022324 245 -------------QLIISGSSLGSIAISGLSSD---QRVATLRSTDCTGHIICLMYPQFL----HMLFFLCFL 297 (299)
Q Consensus 245 -------------~~l~~~~~dg~i~iwd~~~~---~~~~~~~~~~~~~~i~~~~~s~~g----~~l~s~s~~ 297 (299)
++|++|+.|+.|++||++.+ +++..+.+|.. .|++++|+|++ ++|++|+.-
T Consensus 167 ~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~--~V~~v~~sp~~~~~~~~las~s~D 237 (316)
T 3bg1_A 167 LIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSD--WVRDVAWAPSIGLPTSTIASCSQD 237 (316)
T ss_dssp ----CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSS--CEEEEECCCCSSCSCCEEEEEETT
T ss_pred ccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCC--ceEEEEecCCCCCCCceEEEEcCC
Confidence 48999999999999999755 46777888887 89999999987 789999854
No 72
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.96 E-value=1.8e-28 Score=211.24 Aligned_cols=229 Identities=11% Similarity=0.026 Sum_probs=170.5
Q ss_pred CccchhhHHHhhhh-HHHHhhhhhHHHHHHhhhcCCCCCCCchhhhhhhhhhhccccceeecCceeeEEeeccccCeeEE
Q 022324 40 GFFDLVRCSAVCKS-WNAIINRCKLLQLLYCKLHGFSNTSGSSMRLHLEELAMKHHRFALEEGRIDIDQWKAHSVGVDQC 118 (299)
Q Consensus 40 ~h~~~v~~~~~~~~-~~~l~~~~~~w~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~h~~~i~~~ 118 (299)
+|...|+|++|+|. .+.||+ ...|+.+++|.. ...... ....+.+|.+.|+++
T Consensus 117 ~~~~~V~~l~~~P~~~~~las----------------Gs~dg~i~lWd~--~~~~~~--------~~~~~~gH~~~V~~l 170 (435)
T 4e54_B 117 PFDRRATSLAWHPTHPSTVAV----------------GSKGGDIMLWNF--GIKDKP--------TFIKGIGAGGSITGL 170 (435)
T ss_dssp ECSSCEEEEEECSSCTTCEEE----------------EETTSCEEEECS--SCCSCC--------EEECCCSSSCCCCEE
T ss_pred CCCCCEEEEEEeCCCCCEEEE----------------EeCCCEEEEEEC--CCCCce--------eEEEccCCCCCEEEE
Confidence 46667888888884 456665 336777888832 222111 123457899999999
Q ss_pred Ee-c-CC-EEEEEeCCCcEEEEecCCceeEEEecCCC---ceeEEEEecCCCEEE-EEcCCeEEEEecCCce-eeeeccC
Q 022324 119 RM-K-RG-LILTGVGDKVMRLWSLEGYKCVEEYSLPN---AASLVDFDFDESKIV-GLIGTRICIWRRNGLR-SVFPSRE 190 (299)
Q Consensus 119 ~~-~-~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~-~~~d~~i~v~d~~~~~-~~~~~~~ 190 (299)
.| | ++ +|++|+.||+|++||++++........+. .+..++|+|++++|+ ++.||.|++||+++.. ..+..|.
T Consensus 171 ~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~~~~~~~~h~ 250 (435)
T 4e54_B 171 KFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGKELWNLRMHK 250 (435)
T ss_dssp EECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSCBCCCSBCCS
T ss_pred EEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcceeEEEeccc
Confidence 99 4 44 99999999999999998765544443332 234599999999999 9999999999998654 3445555
Q ss_pred CccceeeeeccCCCe-EEEecCCCcEEEEEcCCcceeeec---cccCCceeEEEeCCC-CeEEEEeCCCcEEEEeCCCCc
Q 022324 191 GTFMKGLCMRYFDPE-AVVGCEDGTARVFDMYSRKCSQII---RMHCAPVTSLSLSED-QLIISGSSLGSIAISGLSSDQ 265 (299)
Q Consensus 191 ~~~~~~~~~~~~~~~-l~s~~~d~~i~iwd~~~~~~~~~~---~~~~~~i~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~ 265 (299)
..+. .++++|.++. +++++.|+.|++||+++.+....+ ..|...|++++|+|+ ++|++++.||.|++||+++++
T Consensus 251 ~~v~-~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~ 329 (435)
T 4e54_B 251 KKVT-HVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWD 329 (435)
T ss_dssp SCEE-EEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSS
T ss_pred ceEE-eeeecCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCc
Confidence 5544 4578888775 778999999999999887654433 478999999999999 999999999999999999998
Q ss_pred eEEEeeccCCC----CcEEEEEccCCCCeEEeee
Q 022324 266 RVATLRSTDCT----GHIICLMYPQFLHMLFFLC 295 (299)
Q Consensus 266 ~~~~~~~~~~~----~~i~~~~~s~~g~~l~s~s 295 (299)
+...+..|... ..+....|+|++.++++++
T Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (435)
T 4e54_B 330 CPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGR 363 (435)
T ss_dssp SEEEECCCCCCCCSSSCCCBCEECSSSSCEEEEC
T ss_pred cceEEecccccccccceeEEEEEcCCCCEEEEEE
Confidence 88777665431 1234567788887777664
No 73
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.96 E-value=3.3e-28 Score=210.12 Aligned_cols=188 Identities=18% Similarity=0.267 Sum_probs=158.0
Q ss_pred eEEeeccccCeeEEEecCCEEEEEeCCCcEEEEecCCceeEEEecCCCceeE-EEEecCCCEEE-EEcCCeEEEEecCCc
Q 022324 105 IDQWKAHSVGVDQCRMKRGLILTGVGDKVMRLWSLEGYKCVEEYSLPNAASL-VDFDFDESKIV-GLIGTRICIWRRNGL 182 (299)
Q Consensus 105 ~~~~~~h~~~i~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~-~~~d~~i~v~d~~~~ 182 (299)
+..+.+|...|.++.+.+.++++|+.||.|++||+.+++++..+..|...+. +++ ++..++ ++.|+.|++||++++
T Consensus 232 ~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~ 309 (445)
T 2ovr_B 232 LHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETG 309 (445)
T ss_dssp EEEEECCSSCEEEEEECSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTC
T ss_pred EEEEcCCcccEEEEEECCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEEECCCC
Confidence 5667899999999999666999999999999999999999999987765544 777 778888 999999999999887
Q ss_pred eeeeeccCCccceeeeeccCCCeEEEecCCCcEEEEEcCCcceeeeccc---cCCceeEEEeCCCCeEEEEeCCCcEEEE
Q 022324 183 RSVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRM---HCAPVTSLSLSEDQLIISGSSLGSIAIS 259 (299)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~---~~~~i~~~~~~~~~~l~~~~~dg~i~iw 259 (299)
+..... .++...+.++.+.+..+++|+.||.|++||+++++.+..+.. |...|.+++|++ +++++|+.||.|++|
T Consensus 310 ~~~~~~-~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~l~s~~~dg~v~iw 387 (445)
T 2ovr_B 310 NCIHTL-TGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNK-NFVITSSDDGTVKLW 387 (445)
T ss_dssp CEEEEE-CCCCSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEECS-SEEEEEETTSEEEEE
T ss_pred CEEEEE-cCCcccEEEEEEeCCEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEECC-CEEEEEeCCCeEEEE
Confidence 633222 122233457777888999999999999999999999888875 888999999964 689999999999999
Q ss_pred eCCCCceEEEee-----ccCCCCcEEEEEccCCCCeEEeeeccc
Q 022324 260 GLSSDQRVATLR-----STDCTGHIICLMYPQFLHMLFFLCFLP 298 (299)
Q Consensus 260 d~~~~~~~~~~~-----~~~~~~~i~~~~~s~~g~~l~s~s~~~ 298 (299)
|+++++.+..+. .+.. .|++++|+|++.+|++|+.-+
T Consensus 388 d~~~~~~~~~~~~~~~~~~~~--~v~~~~~s~~~~~la~~~~dg 429 (445)
T 2ovr_B 388 DLKTGEFIRNLVTLESGGSGG--VVWRIRASNTKLVCAVGSRNG 429 (445)
T ss_dssp ETTTCCEEEEEEECTTGGGTC--EEEEEEECSSEEEEEEECSSS
T ss_pred ECCCCceeeeeeccccCCCCc--eEEEEEecCCEEEEEEcccCC
Confidence 999999998883 4555 899999999999999988543
No 74
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.96 E-value=5.1e-28 Score=223.58 Aligned_cols=230 Identities=13% Similarity=0.128 Sum_probs=192.4
Q ss_pred hccCccchhhHHHhhhhHHHHhhhhhHHHHHHhhhcCCCCCCCchhhhhhhhhhhccccceeecCceeeEEeeccccCee
Q 022324 37 SSLGFFDLVRCSAVCKSWNAIINRCKLLQLLYCKLHGFSNTSGSSMRLHLEELAMKHHRFALEEGRIDIDQWKAHSVGVD 116 (299)
Q Consensus 37 ~~~~h~~~v~~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~h~~~i~ 116 (299)
.+.+|.+.|++++|+|+++++++ ...++.+++|.. . ....+..+.+|.++|.
T Consensus 8 ~~~~h~~~v~~i~~sp~~~~la~----------------~~~~g~v~iwd~--~----------~~~~~~~~~~~~~~v~ 59 (814)
T 3mkq_A 8 TFSNRSDRVKGIDFHPTEPWVLT----------------TLYSGRVEIWNY--E----------TQVEVRSIQVTETPVR 59 (814)
T ss_dssp EEEEECSCEEEEEECSSSSEEEE----------------EETTSEEEEEET--T----------TTEEEEEEECCSSCEE
T ss_pred eeecCCCceEEEEECCCCCEEEE----------------EeCCCEEEEEEC--C----------CCceEEEEecCCCcEE
Confidence 45689999999999999999987 224567777732 1 1233556789999999
Q ss_pred EEEe-cCC-EEEEEeCCCcEEEEecCCceeEEEecCCCcee-EEEEecCCCEEE-EEcCCeEEEEecCCce---eeeecc
Q 022324 117 QCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNAAS-LVDFDFDESKIV-GLIGTRICIWRRNGLR---SVFPSR 189 (299)
Q Consensus 117 ~~~~-~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~-~~~d~~i~v~d~~~~~---~~~~~~ 189 (299)
++.| +++ +|++|+.||.|++||+.+++.+..+..|...+ .++|+|+++.++ ++.||.|++||+.+.. ..+..+
T Consensus 60 ~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~ 139 (814)
T 3mkq_A 60 AGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGH 139 (814)
T ss_dssp EEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECC
T ss_pred EEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCC
Confidence 9999 555 99999999999999999999999998776555 599999999998 9999999999998763 334445
Q ss_pred CCccceeeeecc-CCCeEEEecCCCcEEEEEcCCcceeeeccccC-CceeEEEeCC--C-CeEEEEeCCCcEEEEeCCCC
Q 022324 190 EGTFMKGLCMRY-FDPEAVVGCEDGTARVFDMYSRKCSQIIRMHC-APVTSLSLSE--D-QLIISGSSLGSIAISGLSSD 264 (299)
Q Consensus 190 ~~~~~~~~~~~~-~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~i~~~~~~~--~-~~l~~~~~dg~i~iwd~~~~ 264 (299)
...+. .++|+| ++..+++++.|+.|++||+.+++....+..+. ..+.+++|+| + .++++++.||.|++||++++
T Consensus 140 ~~~v~-~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~ 218 (814)
T 3mkq_A 140 EHFVM-CVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTK 218 (814)
T ss_dssp SSCEE-EEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTT
T ss_pred CCcEE-EEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCC
Confidence 44433 457888 67779999999999999999888777766544 8899999998 7 89999999999999999999
Q ss_pred ceEEEeeccCCCCcEEEEEccCCCCeEEeeecc
Q 022324 265 QRVATLRSTDCTGHIICLMYPQFLHMLFFLCFL 297 (299)
Q Consensus 265 ~~~~~~~~~~~~~~i~~~~~s~~g~~l~s~s~~ 297 (299)
+.+..+..|.. .|.+++|+|+|++|++++.-
T Consensus 219 ~~~~~~~~~~~--~v~~~~~~~~~~~l~~~~~d 249 (814)
T 3mkq_A 219 SCVATLEGHMS--NVSFAVFHPTLPIIISGSED 249 (814)
T ss_dssp EEEEEEECCSS--CEEEEEECSSSSEEEEEETT
T ss_pred cEEEEEcCCCC--CEEEEEEcCCCCEEEEEeCC
Confidence 99999998887 89999999999999999853
No 75
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.96 E-value=3.3e-29 Score=208.51 Aligned_cols=248 Identities=12% Similarity=0.102 Sum_probs=197.0
Q ss_pred CCCCCcchhccCcHHHHH---HHhhccCccchhhHHHhhhhHH-HHhhhhhHHHHHHhhhcCCCCCCCchhhhhhhhh-h
Q 022324 16 RSSKPRATIESLNGDIIC---MIFSSLGFFDLVRCSAVCKSWN-AIINRCKLLQLLYCKLHGFSNTSGSSMRLHLEEL-A 90 (299)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~---~i~~~~~h~~~v~~~~~~~~~~-~l~~~~~~w~~~~~~~~~~~~~~d~~~~~~~~~~-~ 90 (299)
..+..+..+.+|+.+... .+....+|...|.+++|+|+++ ++++ ...|+.+++| ++ .
T Consensus 27 ~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~----------------~~~dg~i~~w--d~~~ 88 (342)
T 1yfq_A 27 LITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYV----------------GTVQGEILKV--DLIG 88 (342)
T ss_dssp EEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEE----------------EETTSCEEEE--CSSS
T ss_pred EEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEE----------------EcCCCeEEEE--Eecc
Confidence 344466788899877654 2445558999999999999998 7876 2245667777 32 2
Q ss_pred hccccceeecCceeeEEeec--cccCeeEEEe-cCCEEEEEeCCCcEEEEecCC---------ceeEEEecCCCceeEEE
Q 022324 91 MKHHRFALEEGRIDIDQWKA--HSVGVDQCRM-KRGLILTGVGDKVMRLWSLEG---------YKCVEEYSLPNAASLVD 158 (299)
Q Consensus 91 ~~~~~~~l~~g~~~~~~~~~--h~~~i~~~~~-~~~~l~s~~~dg~i~iwd~~~---------~~~~~~~~~~~~~~~~~ 158 (299)
.. ....+.+ |...|.++.| ++++|++++.|+.|++||+.+ ++++..+.....+..++
T Consensus 89 ~~-----------~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 157 (342)
T 1yfq_A 89 SP-----------SFQALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMD 157 (342)
T ss_dssp SS-----------SEEECBSCCCCSCEEEEEEETTTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEE
T ss_pred CC-----------ceEeccccCCCCceEEEEeCCCCEEEEEcCCCeEEEEcccccccccccccCCeeeEEeeCCceEEEE
Confidence 11 1245578 9999999999 634999999999999999988 77777777566667799
Q ss_pred EecCCCEEEEEcCCeEEEEecCC-cee----eeeccCCccceeeeecc-CCCeEEEecCCCcEEEEEcCCc------cee
Q 022324 159 FDFDESKIVGLIGTRICIWRRNG-LRS----VFPSREGTFMKGLCMRY-FDPEAVVGCEDGTARVFDMYSR------KCS 226 (299)
Q Consensus 159 ~~~~~~~l~~~~d~~i~v~d~~~-~~~----~~~~~~~~~~~~~~~~~-~~~~l~s~~~d~~i~iwd~~~~------~~~ 226 (299)
|++++ +++++.++.|++||+++ ... ....+.... ..+++++ ++..+++++.||.|++||++.. +..
T Consensus 158 ~~~~~-l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i-~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~ 235 (342)
T 1yfq_A 158 TNSSR-LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQI-RDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKR 235 (342)
T ss_dssp ECSSE-EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCE-EEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTC
T ss_pred ecCCc-EEEEeCCCeEEEEECCccccccceeeecCCCCce-eEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccc
Confidence 99887 44499999999999988 432 222233333 3568888 8899999999999999999876 677
Q ss_pred eeccccCC---------ceeEEEeCCC-CeEEEEeCCCcEEEEeCCCCceEEEeecc-CCCCcEEEEEccCCCCeEEeee
Q 022324 227 QIIRMHCA---------PVTSLSLSED-QLIISGSSLGSIAISGLSSDQRVATLRST-DCTGHIICLMYPQFLHMLFFLC 295 (299)
Q Consensus 227 ~~~~~~~~---------~i~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~-~~~~~i~~~~~s~~g~~l~s~s 295 (299)
..+..|.. .|.+++|+|+ ++|++++.||.|++||+++++++..+..| .. +|.+++ |+|++|++|+
T Consensus 236 ~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~h~~--~v~~~~--~~~~~l~s~s 311 (342)
T 1yfq_A 236 FAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNED--SVVKIA--CSDNILCLAT 311 (342)
T ss_dssp EEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSS--EEEEEE--ECSSEEEEEE
T ss_pred eeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhhhcccCC--CceEec--CCCCeEEEEe
Confidence 77777755 9999999999 99999999999999999999999999988 66 899999 9999999998
Q ss_pred ccc
Q 022324 296 FLP 298 (299)
Q Consensus 296 ~~~ 298 (299)
..+
T Consensus 312 ~Dg 314 (342)
T 1yfq_A 312 SDD 314 (342)
T ss_dssp ECT
T ss_pred cCC
Confidence 654
No 76
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.96 E-value=1.2e-29 Score=244.25 Aligned_cols=277 Identities=13% Similarity=0.101 Sum_probs=215.1
Q ss_pred CCCCCcchhccCcHHHHHHHhhccCccchhhHHHhhhhHHHHhh-----hhhHHHHHHhhhcCCCCC-------------
Q 022324 16 RSSKPRATIESLNGDIICMIFSSLGFFDLVRCSAVCKSWNAIIN-----RCKLLQLLYCKLHGFSNT------------- 77 (299)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~i~~~~~h~~~v~~~~~~~~~~~l~~-----~~~~w~~~~~~~~~~~~~------------- 77 (299)
..+..+..+..|+.+....+..+.+|.+.|.+++|+|+++.+++ .+.+|+..-.........
T Consensus 856 ~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~ 935 (1249)
T 3sfz_A 856 VIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENET 935 (1249)
T ss_dssp EEECSSSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEE
T ss_pred EEEeCCCeEEEEEcCCCceeeecCCCccceEEEEECCCCCEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCc
Confidence 33445677899999988888888899999999999999999887 466777643211100000
Q ss_pred ------CCch--------------hhhhhhhhhhccccceeecCcee-------------eEEeeccccCeeEEEe-cCC
Q 022324 78 ------SGSS--------------MRLHLEELAMKHHRFALEEGRID-------------IDQWKAHSVGVDQCRM-KRG 123 (299)
Q Consensus 78 ------~d~~--------------~~~~~~~~~~~~~~~~l~~g~~~-------------~~~~~~h~~~i~~~~~-~~~ 123 (299)
.... ....+.++.++|++..++.|..+ ...+.+|...|.++.| +++
T Consensus 936 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg 1015 (1249)
T 3sfz_A 936 MVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTADG 1015 (1249)
T ss_dssp EEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCEEECCCCSSCCCCEEECSSS
T ss_pred EEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCceeeecccCCCceEEEEECCCC
Confidence 0000 00012244566666665544332 4556789999999999 666
Q ss_pred -EEEEEeCCCcEEEEecCCceeEEEecCCCceeEEEEecCCCEEEEEcCCeEEEEecCCce--eeeeccCCccceeeeec
Q 022324 124 -LILTGVGDKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIVGLIGTRICIWRRNGLR--SVFPSREGTFMKGLCMR 200 (299)
Q Consensus 124 -~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~i~v~d~~~~~--~~~~~~~~~~~~~~~~~ 200 (299)
+|++++.||.|++||+.+++..........+..+.+++++.+++++.|+.|++||+.+++ ..+..+.+.+. .++++
T Consensus 1016 ~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~-~~~~s 1094 (1249)
T 3sfz_A 1016 KTLISSSEDSVIQVWNWQTGDYVFLQAHQETVKDFRLLQDSRLLSWSFDGTVKVWNVITGRIERDFTCHQGTVL-SCAIS 1094 (1249)
T ss_dssp SCEEEECSSSBEEEEETTTTEEECCBCCSSCEEEEEECSSSEEEEEESSSEEEEEETTTTCCCEEEECCSSCCC-CEEEC
T ss_pred CEEEEEcCCCEEEEEECCCCceEEEecCCCcEEEEEEcCCCcEEEEECCCcEEEEECCCCceeEEEcccCCcEE-EEEEC
Confidence 999999999999999999988765544555666999998877679999999999998775 44555665554 46899
Q ss_pred cCCCeEEEecCCCcEEEEEcCCcceeeeccccCCceeEEEeCCC-CeEEEEeCCCcEEEEeCCCCceEEEe---------
Q 022324 201 YFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGSSLGSIAISGLSSDQRVATL--------- 270 (299)
Q Consensus 201 ~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~--------- 270 (299)
+++..+++++.|+.|++||+.+++.+..+.+|...|++++|+|+ ++|++|+.||.|++||+.+++.+..+
T Consensus 1095 ~d~~~l~s~s~d~~v~iwd~~~~~~~~~l~~h~~~v~~~~~s~dg~~lat~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~ 1174 (1249)
T 3sfz_A 1095 SDATKFSSTSADKTAKIWSFDLLSPLHELKGHNGCVRCSAFSLDGILLATGDDNGEIRIWNVSDGQLLHSCAPISVEEGT 1174 (1249)
T ss_dssp SSSSSCEEECCSSCCCEECSSSSSCSBCCCCCSSCEEEEEECSSSSEEEEEETTSCCCEEESSSSCCCCCCCCCC-----
T ss_pred CCCCEEEEEcCCCcEEEEECCCcceeeeeccCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEeccccccccc
Confidence 99999999999999999999999999999999999999999999 99999999999999999999877665
Q ss_pred eccCCCCcEEEEEccCCCCeEEeee
Q 022324 271 RSTDCTGHIICLMYPQFLHMLFFLC 295 (299)
Q Consensus 271 ~~~~~~~~i~~~~~s~~g~~l~s~s 295 (299)
..|.. .|++++|+|+|++|++++
T Consensus 1175 ~~~~~--~v~~l~fs~dg~~l~s~~ 1197 (1249)
T 3sfz_A 1175 ATHGG--WVTDVCFSPDSKTLVSAG 1197 (1249)
T ss_dssp --CCS--CCCEEEECTTSSCEEEES
T ss_pred cccCc--eEEEEEECCCCCEEEECC
Confidence 45555 899999999999999875
No 77
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.96 E-value=3.8e-28 Score=222.55 Aligned_cols=234 Identities=11% Similarity=0.027 Sum_probs=181.9
Q ss_pred hhccCccchhhHHHhhhhHHHHhhhhhHHHHHHhhhcCCCCCCCchhhhhhhhhhhccccceeecCceeeEEeeccccCe
Q 022324 36 FSSLGFFDLVRCSAVCKSWNAIINRCKLLQLLYCKLHGFSNTSGSSMRLHLEELAMKHHRFALEEGRIDIDQWKAHSVGV 115 (299)
Q Consensus 36 ~~~~~h~~~v~~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~h~~~i 115 (299)
..+.+|.+.|++++|+|+++++++ ...|+.+++|.. .. .....+..+.+|.++|
T Consensus 3 ~~l~gH~~~V~~l~~s~dg~~lat----------------g~~dg~I~vwd~--~~--------~~~~~~~~l~~h~~~V 56 (753)
T 3jro_A 3 VIANAHNELIHDAVLDYYGKRLAT----------------CSSDKTIKIFEV--EG--------ETHKLIDTLTGHEGPV 56 (753)
T ss_dssp -----CCCCEEEECCCSSSCCEEE----------------EETTTEEEEEEE--ET--------TEEEEEEEECCCSSCE
T ss_pred eecccCcceeEEEEECCCCCeEEE----------------EECCCcEEEEec--CC--------CCCccceeccCCcCce
Confidence 345689999999999999999987 235677888832 10 0112356778999999
Q ss_pred eEEEe-cC--C-EEEEEeCCCcEEEEecCCce--eEEEecCCCcee-EEEEecC--CCEEE-EEcCCeEEEEecCCce--
Q 022324 116 DQCRM-KR--G-LILTGVGDKVMRLWSLEGYK--CVEEYSLPNAAS-LVDFDFD--ESKIV-GLIGTRICIWRRNGLR-- 183 (299)
Q Consensus 116 ~~~~~-~~--~-~l~s~~~dg~i~iwd~~~~~--~~~~~~~~~~~~-~~~~~~~--~~~l~-~~~d~~i~v~d~~~~~-- 183 (299)
+++.| ++ + +|++|+.||.|++||+.+++ .+..+..|...+ .++|+|+ ++.++ ++.||.|++||+++..
T Consensus 57 ~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~ 136 (753)
T 3jro_A 57 WRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTT 136 (753)
T ss_dssp EEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCC
T ss_pred EEEEecCCCCCCEEEEEeCCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCc
Confidence 99999 54 5 99999999999999999987 666777665544 5999999 88888 9999999999998762
Q ss_pred --eeeeccCCccceeeeecc-------------CCCeEEEecCCCcEEEEEcCCc----ceeeeccccCCceeEEEeCCC
Q 022324 184 --SVFPSREGTFMKGLCMRY-------------FDPEAVVGCEDGTARVFDMYSR----KCSQIIRMHCAPVTSLSLSED 244 (299)
Q Consensus 184 --~~~~~~~~~~~~~~~~~~-------------~~~~l~s~~~d~~i~iwd~~~~----~~~~~~~~~~~~i~~~~~~~~ 244 (299)
.....+...+. .+++++ ++..+++|+.||.|++||++++ .....+..|..+|++++|+|+
T Consensus 137 ~~~~~~~~~~~v~-~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~ 215 (753)
T 3jro_A 137 SPIIIDAHAIGVN-SASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPT 215 (753)
T ss_dssp CCEEEECCSSCEE-EEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCC
T ss_pred ceeEeecCCCceE-EEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccC
Confidence 33344444433 457777 4777999999999999999876 455677789999999999987
Q ss_pred ----CeEEEEeCCCcEEEEeCCCCc-----eEEEeeccCCCCcEEEEEccCCCCeEEeeeccc
Q 022324 245 ----QLIISGSSLGSIAISGLSSDQ-----RVATLRSTDCTGHIICLMYPQFLHMLFFLCFLP 298 (299)
Q Consensus 245 ----~~l~~~~~dg~i~iwd~~~~~-----~~~~~~~~~~~~~i~~~~~s~~g~~l~s~s~~~ 298 (299)
.++++|+.||.|++||+++++ .+.....+.. .|++++|+|+|++|++|+.-+
T Consensus 216 ~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~--~v~~l~~spdg~~l~s~s~Dg 276 (753)
T 3jro_A 216 VLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPD--VLWRASWSLSGNVLALSGGDN 276 (753)
T ss_dssp CSSSEEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSS--CCCCEEECTTTCCEEEECSSS
T ss_pred CCCCCEEEEEecCCEEEEecCCCCCCcceeEEeccCCCCC--ceEEEEEcCCCCEEEEEcCCC
Confidence 589999999999999998864 2233333555 899999999999999987643
No 78
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.95 E-value=5.6e-28 Score=209.64 Aligned_cols=246 Identities=14% Similarity=0.143 Sum_probs=197.1
Q ss_pred CCCCCCcchhccCcHHHHHHHhhccCccchhhHHHhhhhHHHHhhhhhHHHHHHhhhcCCCCCCCchhhhhhhhhhhccc
Q 022324 15 KRSSKPRATIESLNGDIICMIFSSLGFFDLVRCSAVCKSWNAIINRCKLLQLLYCKLHGFSNTSGSSMRLHLEELAMKHH 94 (299)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~i~~~~~h~~~v~~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 94 (299)
...+..+.++++|+.+....+..+.+|.+.|.++++++++ .+++ ...|+.+++| ++..
T Consensus 135 l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~-~l~s----------------~s~dg~i~vw--d~~~--- 192 (464)
T 3v7d_B 135 VITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILVS----------------GSTDRTVRVW--DIKK--- 192 (464)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTT-EEEE----------------EETTSCEEEE--ETTT---
T ss_pred EEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCC-EEEE----------------EeCCCCEEEE--ECCC---
Confidence 3344567889999999888888888999999999999988 5554 2367888888 3222
Q ss_pred cceeecCceeeEEeeccccCeeEEEe---cCC-EEEEEeCCCcEEEEecCCcee-----------------------EEE
Q 022324 95 RFALEEGRIDIDQWKAHSVGVDQCRM---KRG-LILTGVGDKVMRLWSLEGYKC-----------------------VEE 147 (299)
Q Consensus 95 ~~~l~~g~~~~~~~~~h~~~i~~~~~---~~~-~l~s~~~dg~i~iwd~~~~~~-----------------------~~~ 147 (299)
...+..+.+|.+.|.++.+ +++ ++++|+.||+|++||+.+++. +..
T Consensus 193 -------~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (464)
T 3v7d_B 193 -------GCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGV 265 (464)
T ss_dssp -------TEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEE
T ss_pred -------CcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEE
Confidence 2235567899999999988 244 999999999999999987653 334
Q ss_pred ecCCCceeEEEEecCCCEEE-EEcCCeEEEEecCCcee--eeeccCCccceeeeeccCCCeEEEecCCCcEEEEEcCCcc
Q 022324 148 YSLPNAASLVDFDFDESKIV-GLIGTRICIWRRNGLRS--VFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRK 224 (299)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~l~-~~~d~~i~v~d~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~ 224 (299)
+..|...+ .+++++++.++ ++.|+.|++||+++.+. .+..+...+. .++++++++.+++|+.|+.|++||+++++
T Consensus 266 ~~~~~~~v-~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~sg~~dg~i~vwd~~~~~ 343 (464)
T 3v7d_B 266 LRGHMASV-RTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIY-STIYDHERKRCISASMDTTIRIWDLENGE 343 (464)
T ss_dssp ECCCSSCE-EEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEE-EEEEETTTTEEEEEETTSCEEEEETTTTE
T ss_pred ccCccceE-EEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEE-EEEEcCCCCEEEEEeCCCcEEEEECCCCc
Confidence 44444333 34477888888 99999999999998763 3444554443 46888999999999999999999999999
Q ss_pred eeeeccccCCceeEEEeCCCCeEEEEeCCCcEEEEeCCCCceEEEeeccCCCCcEEEEEccCCCCeEEeee
Q 022324 225 CSQIIRMHCAPVTSLSLSEDQLIISGSSLGSIAISGLSSDQRVATLRSTDCTGHIICLMYPQFLHMLFFLC 295 (299)
Q Consensus 225 ~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~s~s 295 (299)
.+..+..|...|.++++++ .++++++.||.|++||+++++....... .. .+..++|+|++++|++|+
T Consensus 344 ~~~~~~~h~~~v~~~~~~~-~~l~s~s~dg~v~vwd~~~~~~~~~~~~-~~--~~~~~~~~~~~~~l~~~~ 410 (464)
T 3v7d_B 344 LMYTLQGHTALVGLLRLSD-KFLVSAAADGSIRGWDANDYSRKFSYHH-TN--LSAITTFYVSDNILVSGS 410 (464)
T ss_dssp EEEEECCCSSCEEEEEECS-SEEEEEETTSEEEEEETTTCCEEEEEEC-TT--CCCEEEEEECSSEEEEEE
T ss_pred EEEEEeCCCCcEEEEEEcC-CEEEEEeCCCcEEEEECCCCceeeeecC-CC--CccEEEEEeCCCEEEEec
Confidence 9999999999999999974 6899999999999999999887666643 33 688889999999999987
No 79
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.95 E-value=4.6e-27 Score=202.44 Aligned_cols=188 Identities=13% Similarity=0.047 Sum_probs=150.4
Q ss_pred EeeccccCeeEEEe-c-CC-EEEEEeCCCcEEEEecCCceeEE--EecCCCc-eeEEEEec-CCCEEE-EEcCCeEEEEe
Q 022324 107 QWKAHSVGVDQCRM-K-RG-LILTGVGDKVMRLWSLEGYKCVE--EYSLPNA-ASLVDFDF-DESKIV-GLIGTRICIWR 178 (299)
Q Consensus 107 ~~~~h~~~i~~~~~-~-~~-~l~s~~~dg~i~iwd~~~~~~~~--~~~~~~~-~~~~~~~~-~~~~l~-~~~d~~i~v~d 178 (299)
...+|...|++++| | ++ +|++|+.||+|+|||+.+++... .+.+|.. +..++|+| ++++|+ ++.|++|++||
T Consensus 114 ~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd 193 (435)
T 4e54_B 114 KAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQD 193 (435)
T ss_dssp EEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEE
T ss_pred cCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEee
Confidence 44689999999999 4 33 89999999999999998776443 4445654 45599998 678888 99999999999
Q ss_pred cCCcee-eeeccCCcc--ceeeeeccCCCeEEEecCCCcEEEEEcCCcceeeeccccCCceeEEEeCCC--CeEEEEeCC
Q 022324 179 RNGLRS-VFPSREGTF--MKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED--QLIISGSSL 253 (299)
Q Consensus 179 ~~~~~~-~~~~~~~~~--~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~--~~l~~~~~d 253 (299)
+++... .+....... ...+++++++..+++|+.||.|++||++ ++.+..+..|...|.+++|+|+ .++++|+.|
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~-~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d 272 (435)
T 4e54_B 194 FKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMD-GKELWNLRMHKKKVTHVALNPCCDWFLATASVD 272 (435)
T ss_dssp TTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESS-SCBCCCSBCCSSCEEEEEECTTCSSEEEEEETT
T ss_pred ccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccC-cceeEEEecccceEEeeeecCCCceEEEEecCc
Confidence 987642 222222221 2246788899999999999999999997 5667778899999999999997 588899999
Q ss_pred CcEEEEeCCCCceEEEe---eccCCCCcEEEEEccCCCCeEEeeecc
Q 022324 254 GSIAISGLSSDQRVATL---RSTDCTGHIICLMYPQFLHMLFFLCFL 297 (299)
Q Consensus 254 g~i~iwd~~~~~~~~~~---~~~~~~~~i~~~~~s~~g~~l~s~s~~ 297 (299)
+.|++||+++++....+ .+|.. +|++++|+|+|++|++|+.-
T Consensus 273 ~~v~iwd~~~~~~~~~~~~~~~h~~--~v~~~~~spdg~~l~s~~~D 317 (435)
T 4e54_B 273 QTVKIWDLRQVRGKASFLYSLPHRH--PVNAACFSPDGARLLTTDQK 317 (435)
T ss_dssp SBCCEEETTTCCSSSCCSBCCBCSS--CEEECCBCTTSSEEEEEESS
T ss_pred ceeeEEecccccccceEEEeeeccc--cccceeECCCCCeeEEEcCC
Confidence 99999999887654333 45666 89999999999999999864
No 80
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.95 E-value=5.2e-26 Score=206.86 Aligned_cols=190 Identities=15% Similarity=0.086 Sum_probs=160.7
Q ss_pred eEEeeccccCeeEEEe-cCC--EEEEEeCCCcEEEEecCC-----ceeEEEecCCCceeE-EEEecCCCEEE-EEcCCeE
Q 022324 105 IDQWKAHSVGVDQCRM-KRG--LILTGVGDKVMRLWSLEG-----YKCVEEYSLPNAASL-VDFDFDESKIV-GLIGTRI 174 (299)
Q Consensus 105 ~~~~~~h~~~i~~~~~-~~~--~l~s~~~dg~i~iwd~~~-----~~~~~~~~~~~~~~~-~~~~~~~~~l~-~~~d~~i 174 (299)
...+++|++.|+++++ +++ +|+||+.|++|++||+.+ +.....+.+|...+. ++|+|++++|+ ++.|+.|
T Consensus 375 ~~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v 454 (694)
T 3dm0_A 375 KGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGEL 454 (694)
T ss_dssp EEEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred hhhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcE
Confidence 4567999999999999 333 899999999999999875 345667777866554 99999999999 9999999
Q ss_pred EEEecCCce--eeeeccCCccceeeeeccCCCeEEEecCCCcEEEEEcCCcceeee---ccccCCceeEEEeCCC---Ce
Q 022324 175 CIWRRNGLR--SVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQI---IRMHCAPVTSLSLSED---QL 246 (299)
Q Consensus 175 ~v~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~---~~~~~~~i~~~~~~~~---~~ 246 (299)
++||+.++. ..+..|.+.+. .+++++++..+++++.|+.|++||......... ...|...|.+++|+|+ ..
T Consensus 455 ~vwd~~~~~~~~~~~~h~~~v~-~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~ 533 (694)
T 3dm0_A 455 RLWDLAAGVSTRRFVGHTKDVL-SVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPT 533 (694)
T ss_dssp EEEETTTTEEEEEEECCSSCEE-EEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCE
T ss_pred EEEECCCCcceeEEeCCCCCEE-EEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcce
Confidence 999998875 34556666654 468999999999999999999999875433222 2368889999999987 47
Q ss_pred EEEEeCCCcEEEEeCCCCceEEEeeccCCCCcEEEEEccCCCCeEEeeecc
Q 022324 247 IISGSSLGSIAISGLSSDQRVATLRSTDCTGHIICLMYPQFLHMLFFLCFL 297 (299)
Q Consensus 247 l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~s~s~~ 297 (299)
+++++.|++|++||++++++...+.+|.. .|++++|+|+|++|++|+.-
T Consensus 534 l~s~s~d~~v~vwd~~~~~~~~~~~~h~~--~v~~v~~spdg~~l~sg~~D 582 (694)
T 3dm0_A 534 IVSASWDKTVKVWNLSNCKLRSTLAGHTG--YVSTVAVSPDGSLCASGGKD 582 (694)
T ss_dssp EEEEETTSCEEEEETTTCCEEEEECCCSS--CEEEEEECTTSSEEEEEETT
T ss_pred EEEEeCCCeEEEEECCCCcEEEEEcCCCC--CEEEEEEeCCCCEEEEEeCC
Confidence 99999999999999999999999999988 99999999999999999864
No 81
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.95 E-value=5.8e-28 Score=208.29 Aligned_cols=239 Identities=11% Similarity=0.160 Sum_probs=177.2
Q ss_pred cCccchhhHHHhhhhHHHHhhhhhHHHHHHhhhcCCCCCCCchhhhhhhhhhhccccceeecCce-eeEEeeccc-----
Q 022324 39 LGFFDLVRCSAVCKSWNAIINRCKLLQLLYCKLHGFSNTSGSSMRLHLEELAMKHHRFALEEGRI-DIDQWKAHS----- 112 (299)
Q Consensus 39 ~~h~~~v~~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~g~~-~~~~~~~h~----- 112 (299)
+.|.+.|.|++|+|++++|++ ...|+.+++|.. ...........+.. ....+++|.
T Consensus 25 ~~~~~~V~~v~~s~~g~~la~----------------g~~dg~v~iw~~--~~~~~~~~~~~~~~~~~~~~~~h~~~~~~ 86 (447)
T 3dw8_B 25 VAEADIISTVEFNHSGELLAT----------------GDKGGRVVIFQQ--EQENKIQSHSRGEYNVYSTFQSHEPEFDY 86 (447)
T ss_dssp CCGGGSEEEEEECSSSSEEEE----------------EETTSEEEEEEE--CC-----CCCCCCEEEEEEEECCCCEEEG
T ss_pred ccccCcEEEEEECCCCCEEEE----------------EcCCCeEEEEEe--cCCCCCCcccccceeEecccccccccccc
Confidence 467899999999999999997 235677777732 22111000011111 256778998
Q ss_pred -------cCeeEEEe-cC---CEEEEEeCCCcEEEEecCCceeE------------------------------------
Q 022324 113 -------VGVDQCRM-KR---GLILTGVGDKVMRLWSLEGYKCV------------------------------------ 145 (299)
Q Consensus 113 -------~~i~~~~~-~~---~~l~s~~~dg~i~iwd~~~~~~~------------------------------------ 145 (299)
+.|+++.| ++ .+|++++.|++|++||+.+++..
T Consensus 87 ~~~~~~~~~V~~l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (447)
T 3dw8_B 87 LKSLEIEEKINKIRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEA 166 (447)
T ss_dssp GGTEEECCCCCEEEECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEE
T ss_pred cccccccCceEEEEEcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeec
Confidence 88999999 54 38999999999999999875442
Q ss_pred ---EEe-cCCCc-eeEEEEecCCCEEEEEcCCeEEEEecCCceee----------eeccCCccceeeeeccCC-CeEEEe
Q 022324 146 ---EEY-SLPNA-ASLVDFDFDESKIVGLIGTRICIWRRNGLRSV----------FPSREGTFMKGLCMRYFD-PEAVVG 209 (299)
Q Consensus 146 ---~~~-~~~~~-~~~~~~~~~~~~l~~~~d~~i~v~d~~~~~~~----------~~~~~~~~~~~~~~~~~~-~~l~s~ 209 (299)
..+ ..|.. +..++|+|++++++++.|+.|++||+++.... +..+...+. .++|+|++ ..+++|
T Consensus 167 ~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~p~~~~~l~s~ 245 (447)
T 3dw8_B 167 SPRRIFANAHTYHINSISINSDYETYLSADDLRINLWHLEITDRSFNIVDIKPANMEELTEVIT-AAEFHPNSCNTFVYS 245 (447)
T ss_dssp EEEEEECSCCSSCCCEEEECTTSSEEEEECSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEE-EEEECSSCTTEEEEE
T ss_pred cceEEeccCCCcceEEEEEcCCCCEEEEeCCCeEEEEECCCCCceeeeeecccccccccCcceE-EEEECCCCCcEEEEE
Confidence 122 34544 45599999999999338999999999854322 223444333 56888988 789999
Q ss_pred cCCCcEEEEEcCCcce----eeeccccCC------------ceeEEEeCCC-CeEEEEeCCCcEEEEeCCC-CceEEEee
Q 022324 210 CEDGTARVFDMYSRKC----SQIIRMHCA------------PVTSLSLSED-QLIISGSSLGSIAISGLSS-DQRVATLR 271 (299)
Q Consensus 210 ~~d~~i~iwd~~~~~~----~~~~~~~~~------------~i~~~~~~~~-~~l~~~~~dg~i~iwd~~~-~~~~~~~~ 271 (299)
+.|+.|++||+++++. +..+..|.. .|.+++|+|+ ++|++++. +.|++||+++ ++++..+.
T Consensus 246 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~ 324 (447)
T 3dw8_B 246 SSKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQ 324 (447)
T ss_dssp ETTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEE
T ss_pred eCCCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceee
Confidence 9999999999998886 677777765 8999999999 99999998 9999999997 88888888
Q ss_pred ccCCCC-------------cEEEEEccCCCCeEEeeecc
Q 022324 272 STDCTG-------------HIICLMYPQFLHMLFFLCFL 297 (299)
Q Consensus 272 ~~~~~~-------------~i~~~~~s~~g~~l~s~s~~ 297 (299)
.|.... .+..++|+|+|++|++|+.-
T Consensus 325 ~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~d 363 (447)
T 3dw8_B 325 VHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYN 363 (447)
T ss_dssp SCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECST
T ss_pred ccccccccccccccccccccceEEEECCCCCEEEEeccC
Confidence 775310 13349999999999999854
No 82
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.95 E-value=9.5e-29 Score=212.95 Aligned_cols=241 Identities=20% Similarity=0.260 Sum_probs=195.2
Q ss_pred CCCCcchhccCcHHHHHHHhhccCccchhhHHHhhhhHHHHhhhhhHHHHHHhhhcCCCCCCCchhhhhhhhhhhccccc
Q 022324 17 SSKPRATIESLNGDIICMIFSSLGFFDLVRCSAVCKSWNAIINRCKLLQLLYCKLHGFSNTSGSSMRLHLEELAMKHHRF 96 (299)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~i~~~~~h~~~v~~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 96 (299)
.+..+..+++|+.+....+..+.+|.+.|.++++ +++.+++ ...|+.+++|.. ..
T Consensus 148 ~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s----------------g~~dg~i~vwd~--~~----- 202 (435)
T 1p22_A 148 SGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIIT----------------GSSDSTVRVWDV--NT----- 202 (435)
T ss_dssp EEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEE----------------EETTSCEEEEES--SS-----
T ss_pred EEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE--CCCEEEE----------------EcCCCeEEEEEC--CC-----
Confidence 3345678999998888777788899999999888 5666665 236778888832 21
Q ss_pred eeecCceeeEEeeccccCeeEEEecCCEEEEEeCCCcEEEEecCCceeE---EEecCCCceeE-EEEecCCCEEE-EEcC
Q 022324 97 ALEEGRIDIDQWKAHSVGVDQCRMKRGLILTGVGDKVMRLWSLEGYKCV---EEYSLPNAASL-VDFDFDESKIV-GLIG 171 (299)
Q Consensus 97 ~l~~g~~~~~~~~~h~~~i~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~---~~~~~~~~~~~-~~~~~~~~~l~-~~~d 171 (299)
...+..+.+|...|.++.+.++++++|+.||.|++||+.+++.. ..+..|...+. +++ +++.++ ++.|
T Consensus 203 -----~~~~~~~~~h~~~v~~l~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~d 275 (435)
T 1p22_A 203 -----GEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGD 275 (435)
T ss_dssp -----CCEEEEECCCCSCEEEEECCTTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETT
T ss_pred -----CcEEEEEcCCCCcEEEEEEcCCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCC
Confidence 12356678999999999998789999999999999999987655 55666655444 777 677888 9999
Q ss_pred CeEEEEecCCcee--eeeccCCccceeeeeccCCCeEEEecCCCcEEEEEcCCcceeeeccccCCceeEEEeCCCCeEEE
Q 022324 172 TRICIWRRNGLRS--VFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSEDQLIIS 249 (299)
Q Consensus 172 ~~i~v~d~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~ 249 (299)
+.|++||+++... .+..+... +.++.+++..+++|+.||.|++||+++++.+..+..|...|.++++ .+.+|++
T Consensus 276 g~i~vwd~~~~~~~~~~~~~~~~---v~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~-~~~~l~s 351 (435)
T 1p22_A 276 RTIKVWNTSTCEFVRTLNGHKRG---IACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF-DNKRIVS 351 (435)
T ss_dssp SEEEEEETTTCCEEEEEECCSSC---EEEEEEETTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEC-CSSEEEE
T ss_pred CeEEEEECCcCcEEEEEcCCCCc---EEEEEeCCCEEEEEeCCCeEEEEECCCCCEEEEEeCCcCcEEEEEe-cCCEEEE
Confidence 9999999998753 33444433 4566667888999999999999999999999999999999999999 2378999
Q ss_pred EeCCCcEEEEeCCCCc---------eEEEeeccCCCCcEEEEEccCCCCeEEeeecc
Q 022324 250 GSSLGSIAISGLSSDQ---------RVATLRSTDCTGHIICLMYPQFLHMLFFLCFL 297 (299)
Q Consensus 250 ~~~dg~i~iwd~~~~~---------~~~~~~~~~~~~~i~~~~~s~~g~~l~s~s~~ 297 (299)
|+.||.|++||+++++ ++..+..|.. .|.+++| ++.+|++|+.-
T Consensus 352 g~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~--~v~~l~~--~~~~l~s~s~D 404 (435)
T 1p22_A 352 GAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSG--RVFRLQF--DEFQIVSSSHD 404 (435)
T ss_dssp EETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSS--CCCCEEE--CSSCEEECCSS
T ss_pred EeCCCcEEEEECCCCCCccccccchheeeccCCCC--CeEEEEe--CCCEEEEEeCC
Confidence 9999999999998766 8889998888 8999999 78889998854
No 83
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.95 E-value=4e-27 Score=197.47 Aligned_cols=231 Identities=12% Similarity=0.075 Sum_probs=163.3
Q ss_pred cHHHHHHHhhccCccchhhHHHhhhhHHHHhhhhhHHHHHHhhhcCCCCCCCchhhhhhhhhhhccccceeecCceeeEE
Q 022324 28 NGDIICMIFSSLGFFDLVRCSAVCKSWNAIINRCKLLQLLYCKLHGFSNTSGSSMRLHLEELAMKHHRFALEEGRIDIDQ 107 (299)
Q Consensus 28 ~~~~~~~i~~~~~h~~~v~~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~g~~~~~~ 107 (299)
+..+...+....+|.+.|.|++|+|+++++++ . .+..+++|.. . +... ..
T Consensus 5 s~~~~~~~~~~~~h~~~V~~v~fs~dg~~la~----------------g-~~~~~~iw~~--~--~~~~--------~~- 54 (355)
T 3vu4_A 5 SMITRNPIVPENHVSNPVTDYEFNQDQSCLIL----------------S-TLKSFEIYNV--H--PVAH--------IM- 54 (355)
T ss_dssp --------------CCCCCEEEECTTSSEEEE----------------E-CSSEEEEEEE--T--TEEE--------EE-
T ss_pred cccccCCccccccCCCceEEEEECCCCCEEEE----------------E-cCCEEEEEec--C--Ccce--------ee-
Confidence 34444555567789999999999999999886 1 2234566632 1 1111 11
Q ss_pred eeccccCeeEEEe--cCC-EEEEEeCCCcEEEEecCCceeEEEecCCCceeEEEEecCCCEEEEEcCCeEEEEecCCc-e
Q 022324 108 WKAHSVGVDQCRM--KRG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIVGLIGTRICIWRRNGL-R 183 (299)
Q Consensus 108 ~~~h~~~i~~~~~--~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~i~v~d~~~~-~ 183 (299)
..+...+..+.+ .++ ++++++.|++|++||..+++++..+..+..+..+.++++ .++.+.++.|++||+.+. +
T Consensus 55 -~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~~~~~~~~~~~v~~v~~~~~--~~~~~~~~~i~i~d~~~~~~ 131 (355)
T 3vu4_A 55 -SQEMRHLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQDVSRIKVDAPVKDLFLSRE--FIVVSYGDVISVFKFGNPWK 131 (355)
T ss_dssp -EEECSCCCEEEECTTSSEEEEECSSTTEEEEEETTTTEEEEEEECSSCEEEEEECSS--EEEEEETTEEEEEESSTTCC
T ss_pred -eeecCCeEEEEEcCCCCEEEEEECCccEEEEEECCCCcEEEEEECCCceEEEEEcCC--EEEEEEcCEEEEEECCCCce
Confidence 112224666666 344 457788899999999999999999988777777888765 455556899999999877 3
Q ss_pred eeeeccCCccceeeeeccCCCeEEE--ecCCCcEEEEEcCCcc----------------eeeeccccCCceeEEEeCCC-
Q 022324 184 SVFPSREGTFMKGLCMRYFDPEAVV--GCEDGTARVFDMYSRK----------------CSQIIRMHCAPVTSLSLSED- 244 (299)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~l~s--~~~d~~i~iwd~~~~~----------------~~~~~~~~~~~i~~~~~~~~- 244 (299)
..... .. ...+.++++ ..++. |+.+|.|++||+++++ .+..+.+|..+|++++|+|+
T Consensus 132 ~~~~~-~~-~~~~~~~s~--~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g 207 (355)
T 3vu4_A 132 RITDD-IR-FGGVCEFSN--GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKS 207 (355)
T ss_dssp BSSCC-EE-EEEEEEEET--TEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTS
T ss_pred eeEEe-cc-CCceEEEEc--cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCC
Confidence 22211 11 222445665 55554 6899999999999765 26778899999999999999
Q ss_pred CeEEEEeCCCc-EEEEeCCCCceEEEee-c-cCCCCcEEEEEccCCCCeEEeeecc
Q 022324 245 QLIISGSSLGS-IAISGLSSDQRVATLR-S-TDCTGHIICLMYPQFLHMLFFLCFL 297 (299)
Q Consensus 245 ~~l~~~~~dg~-i~iwd~~~~~~~~~~~-~-~~~~~~i~~~~~s~~g~~l~s~s~~ 297 (299)
++|++|+.|++ |++||+++++++.++. + |.. .|++++|+|+|++|++++.-
T Consensus 208 ~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~--~v~~~~~s~~~~~l~s~s~d 261 (355)
T 3vu4_A 208 DMVATCSQDGTIIRVFKTEDGVLVREFRRGLDRA--DVVDMKWSTDGSKLAVVSDK 261 (355)
T ss_dssp SEEEEEETTCSEEEEEETTTCCEEEEEECTTCCS--CEEEEEECTTSCEEEEEETT
T ss_pred CEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCCC--cEEEEEECCCCCEEEEEECC
Confidence 99999999999 9999999999999998 4 666 89999999999999999864
No 84
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.95 E-value=6.3e-28 Score=207.75 Aligned_cols=266 Identities=11% Similarity=0.060 Sum_probs=195.7
Q ss_pred CCCCCCCCCcchhccCcHHHHHHHh----h-ccCccchhhHHHhhhhHHHHhhhhhHHHHHHhhhcCCCCCCCchhhhhh
Q 022324 12 PPKKRSSKPRATIESLNGDIICMIF----S-SLGFFDLVRCSAVCKSWNAIINRCKLLQLLYCKLHGFSNTSGSSMRLHL 86 (299)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~i~----~-~~~h~~~v~~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~d~~~~~~~ 86 (299)
.+....+..+.++++|+.+....-. . ..+|.+.|.+++|+++++.+++ ...|+.+++|
T Consensus 76 ~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s----------------~s~dg~i~vw- 138 (437)
T 3gre_A 76 TPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDAFAV----------------SSKDGQIIVL- 138 (437)
T ss_dssp SCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSEEEE----------------EETTSEEEEE-
T ss_pred CCEEEEecCCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCCEEEE----------------EeCCCEEEEE-
Confidence 4455666678899999988743221 1 1268999999999999998886 3367778888
Q ss_pred hhhhhccccceeecCc-eeeEEee--c--cccCeeEEEe---cCC-EEEEEeCCCcEEEEecCCceeEEEecC--C-Cce
Q 022324 87 EELAMKHHRFALEEGR-IDIDQWK--A--HSVGVDQCRM---KRG-LILTGVGDKVMRLWSLEGYKCVEEYSL--P-NAA 154 (299)
Q Consensus 87 ~~~~~~~~~~~l~~g~-~~~~~~~--~--h~~~i~~~~~---~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~--~-~~~ 154 (299)
++.....++.+.... ..++.+. . +...+.++.+ +++ +|++|+.||.|++||+.+++++..+.. | ..+
T Consensus 139 -d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v 217 (437)
T 3gre_A 139 -KVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHGAV 217 (437)
T ss_dssp -EEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGCCE
T ss_pred -EeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCce
Confidence 443222222211111 1233332 2 5667777764 445 999999999999999999999999986 4 455
Q ss_pred eEEEEecCCCEEE-EEcCCeEEEEecCCceeeee---ccCCccceeeeec----cCCCeEEEecCCCcEEEEEcCCccee
Q 022324 155 SLVDFDFDESKIV-GLIGTRICIWRRNGLRSVFP---SREGTFMKGLCMR----YFDPEAVVGCEDGTARVFDMYSRKCS 226 (299)
Q Consensus 155 ~~~~~~~~~~~l~-~~~d~~i~v~d~~~~~~~~~---~~~~~~~~~~~~~----~~~~~l~s~~~d~~i~iwd~~~~~~~ 226 (299)
..++|+|++++|+ ++.||.|++||+++...... .+...+ ..+++. +++..+++++.|+.|++||+++++.+
T Consensus 218 ~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v-~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~ 296 (437)
T 3gre_A 218 SSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPI-THVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQ 296 (437)
T ss_dssp EEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEE-EEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEE
T ss_pred EEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCce-EEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEE
Confidence 5699999999999 99999999999998764332 222222 234333 44557999999999999999988877
Q ss_pred eeccc--------------------------cCCceeEEEeCCCCeEEEEeCCCcEEEEeCCCCceEEEeec--------
Q 022324 227 QIIRM--------------------------HCAPVTSLSLSEDQLIISGSSLGSIAISGLSSDQRVATLRS-------- 272 (299)
Q Consensus 227 ~~~~~--------------------------~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-------- 272 (299)
..+.. |...|++++|+++++|++|+.|+.|++||+.+++++..+.+
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~ 376 (437)
T 3gre_A 297 YAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVSNDKILLTDEATSSIVMFSLNELSSSKAVISPSRFSDVF 376 (437)
T ss_dssp EEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEETTEEEEEEGGGTEEEEEETTCGGGCEEEECC--CCCEE
T ss_pred EEEEcCCCCCccceecccccccccceecccccCCceEEEEECCceEEEecCCCCeEEEEECCCcccceEEecccccCceE
Confidence 66642 55668889999448999999999999999999988887776
Q ss_pred -----------------------------cCCCCcEEEEEccCC--CCeEEeeeccc
Q 022324 273 -----------------------------TDCTGHIICLMYPQF--LHMLFFLCFLP 298 (299)
Q Consensus 273 -----------------------------~~~~~~i~~~~~s~~--g~~l~s~s~~~ 298 (299)
|.. .|++++|+++ +.+|++|+.-+
T Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~--~I~~i~~~~~~~~~~l~s~~~dG 431 (437)
T 3gre_A 377 IPTQVTANLTMLLRKMKRTSTHSVDDSLYHHD--IINSISTCEVDETPLLVACDNSG 431 (437)
T ss_dssp EEEEEETTEEEEEEECC-------------CC--CEEEEEEEESSSSEEEEEEETTS
T ss_pred EEEEeecceEEEEEecccccccccCccccccc--ceeeEeeeccCCceEEEEEcCCc
Confidence 555 8999999998 78999998654
No 85
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.95 E-value=9.7e-26 Score=189.07 Aligned_cols=191 Identities=15% Similarity=0.151 Sum_probs=161.6
Q ss_pred eEEeeccccCeeEEEe-cCC-EEEEEeCCCcEEEEecCCceeEEEecCCCcee-EEEEecCCCEEE-EEcCCeEEEEecC
Q 022324 105 IDQWKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNAAS-LVDFDFDESKIV-GLIGTRICIWRRN 180 (299)
Q Consensus 105 ~~~~~~h~~~i~~~~~-~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~-~~~d~~i~v~d~~ 180 (299)
...+.+|.+.|+++.| +++ +|++++.||.|++||+.+++.+..+..|...+ .++|+|++++|+ ++.|+.|++||+.
T Consensus 25 ~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~ 104 (369)
T 3zwl_B 25 AIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVS 104 (369)
T ss_dssp EEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETT
T ss_pred cEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC
Confidence 5678999999999999 565 99999999999999999999999999776655 499999999999 9999999999999
Q ss_pred CceeeeeccCCccceeeeeccCCCeEEEecCC-----CcEEEEEcCCcce-----------eeeccccCC--ceeEEEeC
Q 022324 181 GLRSVFPSREGTFMKGLCMRYFDPEAVVGCED-----GTARVFDMYSRKC-----------SQIIRMHCA--PVTSLSLS 242 (299)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d-----~~i~iwd~~~~~~-----------~~~~~~~~~--~i~~~~~~ 242 (299)
+.+.............+++++++..+++++.+ +.|.+||+..... +..+..|.. .+.+++|+
T Consensus 105 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (369)
T 3zwl_B 105 NGQCVATWKSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWS 184 (369)
T ss_dssp TCCEEEEEECSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEEC
T ss_pred CCcEEEEeecCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEc
Confidence 87643332233333457899999999999998 9999999986542 233334444 89999999
Q ss_pred CC-CeEEEEeCCCcEEEEeCCC-CceEEEeeccCCCCcEEEEEccCCCCeEEeeecc
Q 022324 243 ED-QLIISGSSLGSIAISGLSS-DQRVATLRSTDCTGHIICLMYPQFLHMLFFLCFL 297 (299)
Q Consensus 243 ~~-~~l~~~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~i~~~~~s~~g~~l~s~s~~ 297 (299)
|+ ++|++++.||.|++||+++ ++.+..+..|.. .|.+++|+|++++|++++.-
T Consensus 185 ~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~l~~~~~d 239 (369)
T 3zwl_B 185 TKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEK--SISDMQFSPDLTYFITSSRD 239 (369)
T ss_dssp GGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSS--CEEEEEECTTSSEEEEEETT
T ss_pred CCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCC--ceeEEEECCCCCEEEEecCC
Confidence 99 9999999999999999998 788889988887 89999999999999998753
No 86
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.95 E-value=3.9e-27 Score=202.60 Aligned_cols=240 Identities=11% Similarity=0.077 Sum_probs=182.8
Q ss_pred hhccCccchhhHHHhhhh-HHHHhhhhhHHHHHHhhhcCCCCCCCchhhhhhhhhhhccccceeecCceeeEEeeccccC
Q 022324 36 FSSLGFFDLVRCSAVCKS-WNAIINRCKLLQLLYCKLHGFSNTSGSSMRLHLEELAMKHHRFALEEGRIDIDQWKAHSVG 114 (299)
Q Consensus 36 ~~~~~h~~~v~~~~~~~~-~~~l~~~~~~w~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~h~~~ 114 (299)
....+|.+.|++++++|+ ++.+++ ...++.+++| ++...............+..+.+|...
T Consensus 122 ~~~~~h~~~v~~l~~~p~~~~~lat----------------~~~dg~V~vw--d~~~~~~~~~~~~~~~~~~~~~~h~~~ 183 (430)
T 2xyi_A 122 EIKINHEGEVNRARYMPQNACVIAT----------------KTPSSDVLVF--DYTKHPSKPEPSGECQPDLRLRGHQKE 183 (430)
T ss_dssp EEEEEESSCCSEEEEETTEEEEEEE----------------ECSSSCEEEE--EGGGSCSSCCTTCCCCCSEEEECCSSC
T ss_pred EEEEcCCCcEEEEEECCCCCcEEEE----------------ECCCCcEEEE--ECCCcccccCccccCCCcEEecCCCCC
Confidence 345589999999999997 667776 2255667777 333321111000112335677899999
Q ss_pred eeEEEe-cCC--EEEEEeCCCcEEEEecCCcee-------EEEecCCCcee-EEEEec-CCCEEE-EEcCCeEEEEecCC
Q 022324 115 VDQCRM-KRG--LILTGVGDKVMRLWSLEGYKC-------VEEYSLPNAAS-LVDFDF-DESKIV-GLIGTRICIWRRNG 181 (299)
Q Consensus 115 i~~~~~-~~~--~l~s~~~dg~i~iwd~~~~~~-------~~~~~~~~~~~-~~~~~~-~~~~l~-~~~d~~i~v~d~~~ 181 (299)
|.++.| +++ +|++|+.||.|++||+.++.. ...+..|...+ .++|+| ++..++ ++.|+.|++||+++
T Consensus 184 v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~ 263 (430)
T 2xyi_A 184 GYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRN 263 (430)
T ss_dssp CCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTC
T ss_pred eEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCC
Confidence 999999 433 899999999999999987321 34555665544 599999 667777 88999999999987
Q ss_pred ce-----eeeeccCCccceeeeeccCCCe-EEEecCCCcEEEEEcCC-cceeeeccccCCceeEEEeCCC--CeEEEEeC
Q 022324 182 LR-----SVFPSREGTFMKGLCMRYFDPE-AVVGCEDGTARVFDMYS-RKCSQIIRMHCAPVTSLSLSED--QLIISGSS 252 (299)
Q Consensus 182 ~~-----~~~~~~~~~~~~~~~~~~~~~~-l~s~~~d~~i~iwd~~~-~~~~~~~~~~~~~i~~~~~~~~--~~l~~~~~ 252 (299)
.. ..+..+...+. .++|++.++. +++|+.||.|++||+++ +..+..+..|...|.+++|+|+ .+|++++.
T Consensus 264 ~~~~~~~~~~~~~~~~v~-~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~ 342 (430)
T 2xyi_A 264 NNTSKPSHTVDAHTAEVN-CLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGT 342 (430)
T ss_dssp SCSSSCSEEEECCSSCEE-EEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEET
T ss_pred CCCCcceeEeecCCCCeE-EEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeC
Confidence 52 23344444433 5688998875 88999999999999998 5667888889999999999998 47999999
Q ss_pred CCcEEEEeCCC--------------CceEEEeeccCCCCcEEEEEccCCCC-eEEeeec
Q 022324 253 LGSIAISGLSS--------------DQRVATLRSTDCTGHIICLMYPQFLH-MLFFLCF 296 (299)
Q Consensus 253 dg~i~iwd~~~--------------~~~~~~~~~~~~~~~i~~~~~s~~g~-~l~s~s~ 296 (299)
|+.|++||+.. .+++..+.+|.. .|++++|+|+++ +|++++.
T Consensus 343 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~--~v~~~~~~p~~~~~l~s~s~ 399 (430)
T 2xyi_A 343 DRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTA--KISDFSWNPNEPWIICSVSE 399 (430)
T ss_dssp TSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSS--CEEEEEECSSSTTEEEEEET
T ss_pred CCcEEEEeCCCCccccCccccccCCcceEEEcCCCCC--CceEEEECCCCCCEEEEEEC
Confidence 99999999986 366777778877 899999999999 7888764
No 87
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.95 E-value=8.5e-28 Score=231.46 Aligned_cols=254 Identities=15% Similarity=0.164 Sum_probs=210.9
Q ss_pred CCCCCCCCcchhccCcHHHHHHHhhccCccchhhHHHhhhhHHHHhhhhhHHHHHHhhhcCCCCCCCchhhhhhhhhhhc
Q 022324 13 PKKRSSKPRATIESLNGDIICMIFSSLGFFDLVRCSAVCKSWNAIINRCKLLQLLYCKLHGFSNTSGSSMRLHLEELAMK 92 (299)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~h~~~v~~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 92 (299)
+....++.+.++.+|+.+....+..+.+|.+.|.+++|+|+++++++ ...|+.+++|.. ..
T Consensus 628 ~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s----------------~~~d~~v~vwd~--~~- 688 (1249)
T 3sfz_A 628 QRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIAT----------------CSADKKVKIWDS--AT- 688 (1249)
T ss_dssp SEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEE----------------EETTSEEEEEET--TT-
T ss_pred CEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEE----------------EeCCCeEEEEEC--CC-
Confidence 33444556778999999998888888899999999999999999987 235677888832 22
Q ss_pred cccceeecCceeeEEeeccccCeeEEEe-c--CC-EEEEEeCCCcEEEEecCCceeEEEecCCCceeE-EEEecCCCEEE
Q 022324 93 HHRFALEEGRIDIDQWKAHSVGVDQCRM-K--RG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNAASL-VDFDFDESKIV 167 (299)
Q Consensus 93 ~~~~~l~~g~~~~~~~~~h~~~i~~~~~-~--~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~ 167 (299)
...+..+.+|...|.++.| + +. ++++|+.|+.|++||+.+++++..+..|...+. ++|+|+++.++
T Consensus 689 ---------~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~ 759 (1249)
T 3sfz_A 689 ---------GKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLA 759 (1249)
T ss_dssp ---------CCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEE
T ss_pred ---------CceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEEE
Confidence 2235667899999999999 4 33 899999999999999999999999988876555 99999999999
Q ss_pred -EEcCCeEEEEecCCceeeeecc--C------------CccceeeeeccCCCeEEEecCCCcEEEEEcCCcceeeecc-c
Q 022324 168 -GLIGTRICIWRRNGLRSVFPSR--E------------GTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIR-M 231 (299)
Q Consensus 168 -~~~d~~i~v~d~~~~~~~~~~~--~------------~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~-~ 231 (299)
++.||.|++||+.+........ . ......+++++++..+++++ ++.+.+||+.++..+..+. .
T Consensus 760 s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~-~~~v~~~d~~~~~~~~~~~~~ 838 (1249)
T 3sfz_A 760 SCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAA-KNKVLLFDIHTSGLLAEIHTG 838 (1249)
T ss_dssp EEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEE-TTEEEEEETTTCCEEEEEECS
T ss_pred EEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEc-CCcEEEEEecCCCceeEEcCC
Confidence 9999999999998764221110 0 01223467888888888776 6899999999998877765 7
Q ss_pred cCCceeEEEeCCC-CeEEEEeCCCcEEEEeCCCCceEEEeeccCCCCcEEEEEccCCCCeEEeeecc
Q 022324 232 HCAPVTSLSLSED-QLIISGSSLGSIAISGLSSDQRVATLRSTDCTGHIICLMYPQFLHMLFFLCFL 297 (299)
Q Consensus 232 ~~~~i~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~s~s~~ 297 (299)
|...|.+++|+|+ .++++++.||.|++||+.+++.+..+.+|.. .|++++|+|+|++|++++.-
T Consensus 839 ~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~--~v~~v~~spdg~~l~s~s~d 903 (1249)
T 3sfz_A 839 HHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCRGHLS--WVHGVMFSPDGSSFLTASDD 903 (1249)
T ss_dssp SSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEECCCSS--CEEEEEECTTSSEEEEEETT
T ss_pred CCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecCCCcc--ceEEEEECCCCCEEEEEeCC
Confidence 8899999999999 9999999999999999999999999999988 99999999999999999864
No 88
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.95 E-value=9.8e-26 Score=190.76 Aligned_cols=189 Identities=11% Similarity=0.093 Sum_probs=158.0
Q ss_pred eEEeeccccCeeEEEe-cCC--EEEEEeCCCcEEEEecCCceeEEEec--CCCc-eeEEEEec-CCCEEE-EEcCCeEEE
Q 022324 105 IDQWKAHSVGVDQCRM-KRG--LILTGVGDKVMRLWSLEGYKCVEEYS--LPNA-ASLVDFDF-DESKIV-GLIGTRICI 176 (299)
Q Consensus 105 ~~~~~~h~~~i~~~~~-~~~--~l~s~~~dg~i~iwd~~~~~~~~~~~--~~~~-~~~~~~~~-~~~~l~-~~~d~~i~v 176 (299)
.+.+.+|...|+++.| +++ +|++|+.||.|++||+.+++....+. .|.. +..++|+| +++.++ ++.|+.|++
T Consensus 66 ~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~i 145 (383)
T 3ei3_B 66 HRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTL 145 (383)
T ss_dssp EEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEE
T ss_pred EEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEE
Confidence 5567899999999999 554 99999999999999999888877765 3544 44599999 677888 999999999
Q ss_pred EecCCce-eeeeccCC--ccceeeeeccCCCeEEEecCCCcEEEEEcCCcceeeeccccCCceeEEEeCCC-C-eEEEEe
Q 022324 177 WRRNGLR-SVFPSREG--TFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-Q-LIISGS 251 (299)
Q Consensus 177 ~d~~~~~-~~~~~~~~--~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~-~-~l~~~~ 251 (299)
||+.+.. ..+..+.. .....+++++++..+++++.|+.|++||+ +++.+..+..|...|.+++|+|+ + ++++++
T Consensus 146 wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~ 224 (383)
T 3ei3_B 146 RDFSGSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKVTHAEFNPRCDWLMATSS 224 (383)
T ss_dssp EETTSCEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEECSSSCEEEEEECSSCTTEEEEEE
T ss_pred EECCCCceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEeccCCCcEEEEEECCCCCCEEEEEe
Confidence 9999754 23333332 22335689999999999999999999999 47788888899999999999999 6 899999
Q ss_pred CCCcEEEEeCCC----CceEEEeeccCCCCcEEEEEccC-CCCeEEeeecc
Q 022324 252 SLGSIAISGLSS----DQRVATLRSTDCTGHIICLMYPQ-FLHMLFFLCFL 297 (299)
Q Consensus 252 ~dg~i~iwd~~~----~~~~~~~~~~~~~~~i~~~~~s~-~g~~l~s~s~~ 297 (299)
.|+.|++||+++ ++++..+ .|.. .|.+++|+| +|++|++++.-
T Consensus 225 ~d~~i~iwd~~~~~~~~~~~~~~-~~~~--~v~~~~~s~~~~~~l~~~~~d 272 (383)
T 3ei3_B 225 VDATVKLWDLRNIKDKNSYIAEM-PHEK--PVNAAYFNPTDSTKLLTTDQR 272 (383)
T ss_dssp TTSEEEEEEGGGCCSTTCEEEEE-ECSS--CEEEEEECTTTSCEEEEEESS
T ss_pred CCCEEEEEeCCCCCcccceEEEe-cCCC--ceEEEEEcCCCCCEEEEEcCC
Confidence 999999999998 6677777 5666 899999999 99999999853
No 89
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.95 E-value=8.8e-28 Score=200.90 Aligned_cols=230 Identities=11% Similarity=0.092 Sum_probs=176.5
Q ss_pred cCccchhhHHHhhhhHHHHhhhhhHHHHHHhhhcCCCCC---CCchhhhhhhhhhhccccceeecCceeeEEeeccccCe
Q 022324 39 LGFFDLVRCSAVCKSWNAIINRCKLLQLLYCKLHGFSNT---SGSSMRLHLEELAMKHHRFALEEGRIDIDQWKAHSVGV 115 (299)
Q Consensus 39 ~~h~~~v~~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~---~d~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~h~~~i 115 (299)
.+|.+.|.+++|+|++..++.. .. .|+.+++|.. . .+........+|..+|
T Consensus 15 ~~h~~~v~~~~~~p~~~~l~~~---------------~s~~~~d~~v~iw~~--~---------~~~~~~~~~~~~~~~v 68 (357)
T 3i2n_A 15 KGFNYTVFDCKWVPCSAKFVTM---------------GNFARGTGVIQLYEI--Q---------HGDLKLLREIEKAKPI 68 (357)
T ss_dssp EECSSCEEEEEECTTSSEEEEE---------------EC--CCCEEEEEEEE--C---------SSSEEEEEEEEESSCE
T ss_pred cCCCCceEEEEEcCCCceEEEe---------------cCccCCCcEEEEEeC--C---------CCcccceeeecccCcE
Confidence 4699999999999998655420 11 2677888832 2 2222222234799999
Q ss_pred eEEEe-cC----CEEEEEeCCCcEEEEecCCce-eEEEecCCCceeE-EE------EecCCCEEE-EEcCCeEEEEecCC
Q 022324 116 DQCRM-KR----GLILTGVGDKVMRLWSLEGYK-CVEEYSLPNAASL-VD------FDFDESKIV-GLIGTRICIWRRNG 181 (299)
Q Consensus 116 ~~~~~-~~----~~l~s~~~dg~i~iwd~~~~~-~~~~~~~~~~~~~-~~------~~~~~~~l~-~~~d~~i~v~d~~~ 181 (299)
.++.| ++ .+|++|+.||.|++||+.+++ .+..+..|...+. ++ |+|+++.++ ++.|+.|++||+++
T Consensus 69 ~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~ 148 (357)
T 3i2n_A 69 KCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQ 148 (357)
T ss_dssp EEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTS
T ss_pred EEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCC
Confidence 99999 54 499999999999999999988 8888887766554 74 468899999 99999999999987
Q ss_pred ce---eeeeccCCc---cceeee----eccCCCeEEEecCCCcEEEEEcCCcceeeeccccCCceeEEEeCC---C-CeE
Q 022324 182 LR---SVFPSREGT---FMKGLC----MRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSE---D-QLI 247 (299)
Q Consensus 182 ~~---~~~~~~~~~---~~~~~~----~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~---~-~~l 247 (299)
.. ..+..+.+. ....++ +++++..+++++.|+.|++||+++++.... ..|...|.+++|+| + .++
T Consensus 149 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~l 227 (357)
T 3i2n_A 149 KDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWE-TNIKNGVCSLEFDRKDISMNKL 227 (357)
T ss_dssp CSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEE-EECSSCEEEEEESCSSSSCCEE
T ss_pred CCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeee-cCCCCceEEEEcCCCCCCCCEE
Confidence 64 233333332 122233 668888899999999999999999887555 47888999999999 7 999
Q ss_pred EEEeCCCcEEEEeCCCCceEEEee-----ccCCCCcEEEEEccCCCC-eEEeeecc
Q 022324 248 ISGSSLGSIAISGLSSDQRVATLR-----STDCTGHIICLMYPQFLH-MLFFLCFL 297 (299)
Q Consensus 248 ~~~~~dg~i~iwd~~~~~~~~~~~-----~~~~~~~i~~~~~s~~g~-~l~s~s~~ 297 (299)
++++.||.|++||+++++.+..+. .|.. .|++++|+|+++ +|++|+.-
T Consensus 228 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~~l~~~~~d 281 (357)
T 3i2n_A 228 VATSLEGKFHVFDMRTQHPTKGFASVSEKAHKS--TVWQVRHLPQNRELFLTAGGA 281 (357)
T ss_dssp EEEESTTEEEEEEEEEEETTTEEEEEEEECCSS--CEEEEEEETTEEEEEEEEETT
T ss_pred EEECCCCeEEEEeCcCCCcccceeeeccCCCcC--CEEEEEECCCCCcEEEEEeCC
Confidence 999999999999998877655554 7777 899999999998 78888753
No 90
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.95 E-value=6.7e-26 Score=190.84 Aligned_cols=191 Identities=17% Similarity=0.206 Sum_probs=157.6
Q ss_pred eEEeeccccCeeEEEe-cCC-EEEEEeCCCcEEEEecC--CceeEEEecCCCcee-EEEEecC--CCEEE-EEcCCeEEE
Q 022324 105 IDQWKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLE--GYKCVEEYSLPNAAS-LVDFDFD--ESKIV-GLIGTRICI 176 (299)
Q Consensus 105 ~~~~~~h~~~i~~~~~-~~~-~l~s~~~dg~i~iwd~~--~~~~~~~~~~~~~~~-~~~~~~~--~~~l~-~~~d~~i~v 176 (299)
+.++++|.+.|++++| +++ +|++|+.||.|++||+. +++.+..+..|...+ .++|+++ +++|+ ++.|+.|++
T Consensus 4 ~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~i 83 (379)
T 3jrp_A 4 VVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLI 83 (379)
T ss_dssp -CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEE
T ss_pred cEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEE
Confidence 3566899999999999 666 99999999999999998 667778888776555 5999877 88888 999999999
Q ss_pred EecCCce----eeeeccCCccceeeeeccC--CCeEEEecCCCcEEEEEcCCcce--eeeccccCCceeEEEeCC-----
Q 022324 177 WRRNGLR----SVFPSREGTFMKGLCMRYF--DPEAVVGCEDGTARVFDMYSRKC--SQIIRMHCAPVTSLSLSE----- 243 (299)
Q Consensus 177 ~d~~~~~----~~~~~~~~~~~~~~~~~~~--~~~l~s~~~d~~i~iwd~~~~~~--~~~~~~~~~~i~~~~~~~----- 243 (299)
||+.+.. ..+..+...+. .++++++ +..+++++.|+.|++||++++.. ...+..|...|.+++|+|
T Consensus 84 wd~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 162 (379)
T 3jrp_A 84 WKEENGRWSQIAVHAVHSASVN-SVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEE 162 (379)
T ss_dssp EEEETTEEEEEEEECCCSSCEE-EEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC---
T ss_pred EEcCCCceeEeeeecCCCcceE-EEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccc
Confidence 9998874 22333444433 5688888 78899999999999999998743 345568899999999999
Q ss_pred --------C-CeEEEEeCCCcEEEEeCCCCc----eEEEeeccCCCCcEEEEEccCC---CCeEEeeeccc
Q 022324 244 --------D-QLIISGSSLGSIAISGLSSDQ----RVATLRSTDCTGHIICLMYPQF---LHMLFFLCFLP 298 (299)
Q Consensus 244 --------~-~~l~~~~~dg~i~iwd~~~~~----~~~~~~~~~~~~~i~~~~~s~~---g~~l~s~s~~~ 298 (299)
+ .++++++.||.|++||+++++ .+..+..|.. .|.+++|+|+ +++|++++.-+
T Consensus 163 ~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~--~v~~~~~sp~~~~~~~l~s~~~dg 231 (379)
T 3jrp_A 163 DGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSD--WVRDVAWSPTVLLRSYLASVSQDR 231 (379)
T ss_dssp -------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSS--CEEEEEECCCCSSSEEEEEEETTS
T ss_pred cccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccC--cEeEEEECCCCCCCCeEEEEeCCC
Confidence 6 899999999999999998764 4567777777 8999999999 89999998643
No 91
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.95 E-value=7.3e-27 Score=217.29 Aligned_cols=228 Identities=11% Similarity=0.072 Sum_probs=176.6
Q ss_pred ccCccchhhHHHhhhhHHHHhhhhhHHHHHHhhhcCCCCCCCchhhhhhhhhhhccccceeecCceeeEEeeccccCeeE
Q 022324 38 SLGFFDLVRCSAVCKSWNAIINRCKLLQLLYCKLHGFSNTSGSSMRLHLEELAMKHHRFALEEGRIDIDQWKAHSVGVDQ 117 (299)
Q Consensus 38 ~~~h~~~v~~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~h~~~i~~ 117 (299)
..+|.+.|+|++|+|++++||+ ...|+.+++|.. .. ........|..+|.+
T Consensus 13 ~~gh~~~V~~lafspdg~~lAs----------------gs~Dg~I~lw~~--~~-----------~~~~~~~~~~~~V~~ 63 (902)
T 2oaj_A 13 KYGMSSKPIAAAFDFTQNLLAI----------------ATVTGEVHIYGQ--QQ-----------VEVVIKLEDRSAIKE 63 (902)
T ss_dssp EEECSSCEEEEEEETTTTEEEE----------------EETTSEEEEECS--TT-----------CEEEEECSSCCCEEE
T ss_pred ccCCCCCcEEEEECCCCCEEEE----------------EeCCCEEEEEeC--CC-----------cEEEEEcCCCCCEEE
Confidence 3489999999999999999997 336677888832 11 111111357889999
Q ss_pred EEecCC-EEEEEeCCCcEEEEecCCceeEEEecCCCceeEEEEecCCCEEE-EEcCCeEEEEecCCceee----------
Q 022324 118 CRMKRG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIV-GLIGTRICIWRRNGLRSV---------- 185 (299)
Q Consensus 118 ~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~d~~i~v~d~~~~~~~---------- 185 (299)
+.|..+ +|++++.|++|++||+.+++++..+..+..+..++|+|++++++ ++.||.|++||+++....
T Consensus 64 l~fspg~~L~S~s~D~~v~lWd~~~~~~~~~~~~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~ 143 (902)
T 2oaj_A 64 MRFVKGIYLVVINAKDTVYVLSLYSQKVLTTVFVPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKS 143 (902)
T ss_dssp EEEETTTEEEEEETTCEEEEEETTTCSEEEEEECSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHH
T ss_pred EEEcCCCEEEEEECcCeEEEEECCCCcEEEEEcCCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceecccccc
Confidence 999336 89999999999999999999999888776777799999999999 999999999999887532
Q ss_pred ---eeccCCccceeeeeccCC-CeEEEecCCCcEEEEEcCCcceeeecccc------------------CCceeEEEeCC
Q 022324 186 ---FPSREGTFMKGLCMRYFD-PEAVVGCEDGTARVFDMYSRKCSQIIRMH------------------CAPVTSLSLSE 243 (299)
Q Consensus 186 ---~~~~~~~~~~~~~~~~~~-~~l~s~~~d~~i~iwd~~~~~~~~~~~~~------------------~~~i~~~~~~~ 243 (299)
...|.+.+. .++|+|.+ ..+++|+.|+.| +||+++++.+..+..| ...|.+++|+|
T Consensus 144 ~~~~~~h~~~V~-sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fsp 221 (902)
T 2oaj_A 144 SFFPAARLSPIV-SIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHP 221 (902)
T ss_dssp HTCSSSCCCCCC-EEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECT
T ss_pred ccccccCCCCeE-EEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcC
Confidence 122333333 45777754 568999999999 9999999888777654 46799999999
Q ss_pred C-CeEEEEeCCCcEEEEeCCCCceEEE--ee---ccC-----------CCCcEEEEEcc----CCC-CeEEeeec
Q 022324 244 D-QLIISGSSLGSIAISGLSSDQRVAT--LR---STD-----------CTGHIICLMYP----QFL-HMLFFLCF 296 (299)
Q Consensus 244 ~-~~l~~~~~dg~i~iwd~~~~~~~~~--~~---~~~-----------~~~~i~~~~~s----~~g-~~l~s~s~ 296 (299)
+ ++|++|+.||.|++||+++++++.. +. .|. ...+|++++|+ |++ .+|++|+.
T Consensus 222 dg~~lasgs~Dg~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~ 296 (902)
T 2oaj_A 222 NSLHIITIHEDNSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKS 296 (902)
T ss_dssp TSSEEEEEETTCCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEEC
T ss_pred CCCEEEEEECCCeEEEEECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCC
Confidence 9 9999999999999999999988764 21 121 11279999995 444 56777754
No 92
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.95 E-value=4.1e-27 Score=198.68 Aligned_cols=187 Identities=11% Similarity=0.059 Sum_probs=149.0
Q ss_pred EeeccccCeeEEEe-cCC-EEEEEeCCCcEEEEecCCc--eeEEEecCCCcee-EEEEecCCCEEE-EEcCCeEEEEecC
Q 022324 107 QWKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGY--KCVEEYSLPNAAS-LVDFDFDESKIV-GLIGTRICIWRRN 180 (299)
Q Consensus 107 ~~~~h~~~i~~~~~-~~~-~l~s~~~dg~i~iwd~~~~--~~~~~~~~~~~~~-~~~~~~~~~~l~-~~~d~~i~v~d~~ 180 (299)
.++.|.++|+++.| +++ +|++|+.|+.|++||+.++ +.+..+..|...+ .++|+|++++|+ ++.|+.|++||+.
T Consensus 6 ~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~ 85 (377)
T 3dwl_C 6 VLHILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKR 85 (377)
T ss_dssp EEEECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC---
T ss_pred eEecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcC
Confidence 34567789999999 666 9999999999999999988 7777888776555 499999999999 9999999999998
Q ss_pred Cce-----eeeeccCCccceeeeeccCCCeEEEecCCCcEEEEEcCCcc---eeeeccc-cCCceeEEEeCCC-CeEEEE
Q 022324 181 GLR-----SVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRK---CSQIIRM-HCAPVTSLSLSED-QLIISG 250 (299)
Q Consensus 181 ~~~-----~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~---~~~~~~~-~~~~i~~~~~~~~-~~l~~~ 250 (299)
+.. ..+..+...+. .+++++++..+++++.|+.|++||+++++ ....+.. |...|.+++|+|+ ++|+++
T Consensus 86 ~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~ 164 (377)
T 3dwl_C 86 PDGTWKQTLVLLRLNRAAT-FVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAG 164 (377)
T ss_dssp ---CCCCEEECCCCSSCEE-EEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEE
T ss_pred CCCceeeeeEecccCCceE-EEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEE
Confidence 764 23334444443 56888989999999999999999999877 3666666 9999999999999 999999
Q ss_pred eCCCcEEEEeCC------------------CCceEEEeeccCCCCcEEEEEccCCCCeEEeeecc
Q 022324 251 SSLGSIAISGLS------------------SDQRVATLRSTDCTGHIICLMYPQFLHMLFFLCFL 297 (299)
Q Consensus 251 ~~dg~i~iwd~~------------------~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~s~s~~ 297 (299)
+.|+.|++||++ .++++..+ .|.. .|.+++|+|+|++|++++..
T Consensus 165 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~v~~~~~sp~~~~l~~~~~d 226 (377)
T 3dwl_C 165 CADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGG--WVHAVGFSPSGNALAYAGHD 226 (377)
T ss_dssp ESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSS--SEEEEEECTTSSCEEEEETT
T ss_pred eCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCc--eEEEEEECCCCCEEEEEeCC
Confidence 999999999985 35566666 6666 89999999999999999854
No 93
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.95 E-value=2.3e-26 Score=198.01 Aligned_cols=191 Identities=14% Similarity=0.171 Sum_probs=151.8
Q ss_pred eeEEe-eccccCeeEEEe-c-CC-EEEEEeCCCcEEEEecCC---ce---eEEEecCCCceeEEEEecCCCEEE-EEcCC
Q 022324 104 DIDQW-KAHSVGVDQCRM-K-RG-LILTGVGDKVMRLWSLEG---YK---CVEEYSLPNAASLVDFDFDESKIV-GLIGT 172 (299)
Q Consensus 104 ~~~~~-~~h~~~i~~~~~-~-~~-~l~s~~~dg~i~iwd~~~---~~---~~~~~~~~~~~~~~~~~~~~~~l~-~~~d~ 172 (299)
.+..+ .+|.+.|++++| + ++ +|++|+.||+|++||+.+ +. ....+.....+..++|+|+++.|+ ++.|+
T Consensus 54 ~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg 133 (437)
T 3gre_A 54 LIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDAFAVSSKDG 133 (437)
T ss_dssp EEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSEEEEEETTS
T ss_pred EEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCCEEEEEeCCC
Confidence 36667 899999999999 5 55 999999999999999876 33 344445455666799999999999 99999
Q ss_pred eEEEEecC---Cceee--eec------------cCCccceeee--eccCCCeEEEecCCCcEEEEEcCCcceeeeccc--
Q 022324 173 RICIWRRN---GLRSV--FPS------------REGTFMKGLC--MRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRM-- 231 (299)
Q Consensus 173 ~i~v~d~~---~~~~~--~~~------------~~~~~~~~~~--~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~-- 231 (299)
.|++||+. ++... ... ...... .+. +++++..+++++.|+.|++||+++++.+..+..
T Consensus 134 ~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~ 212 (437)
T 3gre_A 134 QIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAV-RMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIENSP 212 (437)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEE-EEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEECCG
T ss_pred EEEEEEeccccCCceeeccccceeEEEEccCcccccCce-EEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCC
Confidence 99999995 22111 110 111111 111 345677899999999999999999999998887
Q ss_pred cCCceeEEEeCCC-CeEEEEeCCCcEEEEeCCCCceEEEee-ccCCCCcEEEE----EccCCCCeEEeeecc
Q 022324 232 HCAPVTSLSLSED-QLIISGSSLGSIAISGLSSDQRVATLR-STDCTGHIICL----MYPQFLHMLFFLCFL 297 (299)
Q Consensus 232 ~~~~i~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~-~~~~~~~i~~~----~~s~~g~~l~s~s~~ 297 (299)
|...|++++|+|+ ++|++|+.||.|++||+++++++.++. .+.. +|+++ +|+|++.+|++|+.-
T Consensus 213 h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~--~v~~~~~~~~~s~~~~~l~s~~~d 282 (437)
T 3gre_A 213 RHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHA--PITHVEVCQFYGKNSVIVVGGSSK 282 (437)
T ss_dssp GGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCE--EEEEEEECTTTCTTEEEEEEESTT
T ss_pred CCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCC--ceEEEEeccccCCCccEEEEEcCC
Confidence 8899999999999 999999999999999999999999886 5555 89999 555678899998753
No 94
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.95 E-value=1.3e-25 Score=186.20 Aligned_cols=186 Identities=14% Similarity=0.161 Sum_probs=154.1
Q ss_pred EeeccccCeeEEEe-cCC-EEEEEeCCCcEEEEecCCcee---EEEec--CCC-ceeEEEEecCCCEEE-EEcCCeEEEE
Q 022324 107 QWKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYKC---VEEYS--LPN-AASLVDFDFDESKIV-GLIGTRICIW 177 (299)
Q Consensus 107 ~~~~h~~~i~~~~~-~~~-~l~s~~~dg~i~iwd~~~~~~---~~~~~--~~~-~~~~~~~~~~~~~l~-~~~d~~i~v~ 177 (299)
...+|.+.|.++.| +++ +|++++ ||.|++||+.+++. +..+. .+. .+..++|+|+++.++ ++.|+.|++|
T Consensus 46 ~~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~ 124 (337)
T 1gxr_A 46 NTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIW 124 (337)
T ss_dssp EEECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEE
T ss_pred eeccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEE
Confidence 33589999999999 566 888888 99999999987653 23332 344 455599999999988 9999999999
Q ss_pred ecCCce----eeeeccCCccceeeeeccCCCeEEEecCCCcEEEEEcCCcceeeeccccCCceeEEEeCCC-CeEEEEeC
Q 022324 178 RRNGLR----SVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGSS 252 (299)
Q Consensus 178 d~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~-~~l~~~~~ 252 (299)
|+.+.. ..+..+..... .+++++++..+++++.|+.|++||+++++.+..+..|...|.+++|+|+ ++|++++.
T Consensus 125 d~~~~~~~~~~~~~~~~~~i~-~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~ 203 (337)
T 1gxr_A 125 DLAAPTPRIKAELTSSAPACY-ALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGL 203 (337)
T ss_dssp ECCCC--EEEEEEECSSSCEE-EEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred ECCCCCcceeeecccCCCceE-EEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEec
Confidence 998765 22333443333 5688899999999999999999999999999999889999999999999 89999999
Q ss_pred CCcEEEEeCCCCceEEEeeccCCCCcEEEEEccCCCCeEEeeecc
Q 022324 253 LGSIAISGLSSDQRVATLRSTDCTGHIICLMYPQFLHMLFFLCFL 297 (299)
Q Consensus 253 dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~s~s~~ 297 (299)
||.|++||+++++.+..+.. .. .+.+++|+|++++|++++..
T Consensus 204 dg~i~~~d~~~~~~~~~~~~-~~--~v~~~~~s~~~~~l~~~~~~ 245 (337)
T 1gxr_A 204 DNTVRSWDLREGRQLQQHDF-TS--QIFSLGYCPTGEWLAVGMES 245 (337)
T ss_dssp TSEEEEEETTTTEEEEEEEC-SS--CEEEEEECTTSSEEEEEETT
T ss_pred CCcEEEEECCCCceEeeecC-CC--ceEEEEECCCCCEEEEEcCC
Confidence 99999999999998888754 33 89999999999999998753
No 95
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.95 E-value=5e-26 Score=193.89 Aligned_cols=180 Identities=14% Similarity=0.183 Sum_probs=154.0
Q ss_pred ccccCeeEEEe-cCC-EEEEEeCCCcEEEEecCCceeEEEecCCCceeE-EEEecCCCEEE-EEcCCeEEEEecCCce--
Q 022324 110 AHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNAASL-VDFDFDESKIV-GLIGTRICIWRRNGLR-- 183 (299)
Q Consensus 110 ~h~~~i~~~~~-~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~-~~~d~~i~v~d~~~~~-- 183 (299)
.|...|.++.| +++ +|++|+.||.|++||+.+++.+..+..|...+. ++| +++.++ ++.|+.|++||++...
T Consensus 132 ~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~ 209 (401)
T 4aez_A 132 DESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSW--NRHVLSSGSRSGAIHHHDVRIANHQ 209 (401)
T ss_dssp CTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCE
T ss_pred CCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEEE--CCCEEEEEcCCCCEEEEecccCcce
Confidence 48999999999 566 999999999999999999999999987766554 888 456777 9999999999998543
Q ss_pred -eeeeccCCccceeeeeccCCCeEEEecCCCcEEEEEcCCcceeeeccccCCceeEEEeCCC--CeEEEEe--CCCcEEE
Q 022324 184 -SVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED--QLIISGS--SLGSIAI 258 (299)
Q Consensus 184 -~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~--~~l~~~~--~dg~i~i 258 (299)
..+..+.+.+. .+++++++..+++++.|+.|++||+++++.+..+..|...|.+++|+|+ .++++++ .|+.|++
T Consensus 210 ~~~~~~~~~~v~-~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i 288 (401)
T 4aez_A 210 IGTLQGHSSEVC-GLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHF 288 (401)
T ss_dssp EEEEECCSSCEE-EEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEE
T ss_pred eeEEcCCCCCee-EEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEE
Confidence 34455555544 4688999999999999999999999999999888899999999999996 6777765 7999999
Q ss_pred EeCCCCceEEEeeccCCCCcEEEEEccCCCCeEEeee
Q 022324 259 SGLSSDQRVATLRSTDCTGHIICLMYPQFLHMLFFLC 295 (299)
Q Consensus 259 wd~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~s~s 295 (299)
||+++++++..+..+. .|.+++|+|++++|++++
T Consensus 289 ~d~~~~~~~~~~~~~~---~v~~~~~s~~~~~l~~~~ 322 (401)
T 4aez_A 289 WNAATGARVNTVDAGS---QVTSLIWSPHSKEIMSTH 322 (401)
T ss_dssp EETTTCCEEEEEECSS---CEEEEEECSSSSEEEEEE
T ss_pred EECCCCCEEEEEeCCC---cEEEEEECCCCCeEEEEe
Confidence 9999999999887543 799999999999999854
No 96
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.95 E-value=2.9e-25 Score=186.67 Aligned_cols=188 Identities=13% Similarity=0.048 Sum_probs=157.9
Q ss_pred EeeccccCeeEEEe-cCC-EEEEEeCCCcEEEEecCCce--eEEEecCCCcee-EEEEecCCCEEE-EEcCCeEEEEecC
Q 022324 107 QWKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYK--CVEEYSLPNAAS-LVDFDFDESKIV-GLIGTRICIWRRN 180 (299)
Q Consensus 107 ~~~~h~~~i~~~~~-~~~-~l~s~~~dg~i~iwd~~~~~--~~~~~~~~~~~~-~~~~~~~~~~l~-~~~d~~i~v~d~~ 180 (299)
.+..|.++|+++.| +++ +|++++.|+.|++||+.+++ .+..+..|...+ .++|+|++++++ ++.|+.|++||+.
T Consensus 3 ~~~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~ 82 (372)
T 1k8k_C 3 YHSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLK 82 (372)
T ss_dssp EEESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEE
T ss_pred eecccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECC
Confidence 34679999999999 566 99999999999999999987 888888776555 499999999999 9999999999998
Q ss_pred Ccee--e--eeccCCccceeeeeccCCCeEEEecCCCcEEEEEcCCcce---ee-eccccCCceeEEEeCCC-CeEEEEe
Q 022324 181 GLRS--V--FPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKC---SQ-IIRMHCAPVTSLSLSED-QLIISGS 251 (299)
Q Consensus 181 ~~~~--~--~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~---~~-~~~~~~~~i~~~~~~~~-~~l~~~~ 251 (299)
+.+. . ...+...+. .+++++++..+++++.|+.|++||++.++. .. ....|...|.+++|+|+ ++|++++
T Consensus 83 ~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~ 161 (372)
T 1k8k_C 83 GRTWKPTLVILRINRAAR-CVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGS 161 (372)
T ss_dssp TTEEEEEEECCCCSSCEE-EEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEE
T ss_pred CCeeeeeEEeecCCCcee-EEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEc
Confidence 7752 1 233433333 568889999999999999999999998763 22 33478899999999999 9999999
Q ss_pred CCCcEEEEeC------------------CCCceEEEeeccCCCCcEEEEEccCCCCeEEeeecc
Q 022324 252 SLGSIAISGL------------------SSDQRVATLRSTDCTGHIICLMYPQFLHMLFFLCFL 297 (299)
Q Consensus 252 ~dg~i~iwd~------------------~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~s~s~~ 297 (299)
.||.|++||+ ..++++..+..|.. .|.+++|+|++++|++++..
T Consensus 162 ~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~l~~~~~d 223 (372)
T 1k8k_C 162 CDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCG--WVHGVCFSANGSRVAWVSHD 223 (372)
T ss_dssp TTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSS--CEEEEEECSSSSEEEEEETT
T ss_pred CCCCEEEEEcccccccccccccccccccchhhheEecCCCCC--eEEEEEECCCCCEEEEEeCC
Confidence 9999999995 46788888988877 89999999999999999854
No 97
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.95 E-value=2.5e-27 Score=198.65 Aligned_cols=231 Identities=12% Similarity=0.093 Sum_probs=177.8
Q ss_pred CccchhhHHHhhhh---HH--HHhhhhhHHHHHHhhhcCCCCCCCchhhhhhhhhhhccccceeecCceeeEEeeccccC
Q 022324 40 GFFDLVRCSAVCKS---WN--AIINRCKLLQLLYCKLHGFSNTSGSSMRLHLEELAMKHHRFALEEGRIDIDQWKAHSVG 114 (299)
Q Consensus 40 ~h~~~v~~~~~~~~---~~--~l~~~~~~w~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~h~~~ 114 (299)
+|.+.|.+++|+|+ +. .+++ ..+..+++| ++........+. ......|...
T Consensus 16 ~h~~~v~~i~~~p~~~~~~~~~~~~-----------------~~~~~v~vw--~~~~~~~~~~~~-----~~~~~~~~~~ 71 (366)
T 3k26_A 16 DHNQPLFGVQFNWHSKEGDPLVFAT-----------------VGSNRVTLY--ECHSQGEIRLLQ-----SYVDADADEN 71 (366)
T ss_dssp TTCSCEEEEEECTTCCTTSCEEEEE-----------------EETTEEEEE--EECGGGCEEEEE-----EEECSCTTCC
T ss_pred CCCCceEEEEEecccCCCCceEEEE-----------------CCCCEEEEE--EcCCCcEEEeee-----eccccCCCCc
Confidence 79999999999984 32 3332 133456667 322222111110 0111236788
Q ss_pred eeEEEe-cC----C-EEEEEeCCCcEEEEecCCceeEEEecCCCcee-EEEEec-CCCEEE-EEcCCeEEEEecCCceee
Q 022324 115 VDQCRM-KR----G-LILTGVGDKVMRLWSLEGYKCVEEYSLPNAAS-LVDFDF-DESKIV-GLIGTRICIWRRNGLRSV 185 (299)
Q Consensus 115 i~~~~~-~~----~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~-~~~~~~-~~~~l~-~~~d~~i~v~d~~~~~~~ 185 (299)
|.++.| ++ + +|++|+.||.|++||+.+++.+..+..|...+ .++|+| ++++++ ++.|+.|++||+++++..
T Consensus 72 v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~ 151 (366)
T 3k26_A 72 FYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLV 151 (366)
T ss_dssp EEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEE
T ss_pred EEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEE
Confidence 999999 54 4 89999999999999999999999999776555 499999 889888 999999999999987643
Q ss_pred ee-----ccCCccceeeeeccCCCeEEEecCCCcEEEEEcCCcceeeeccc----------------------------c
Q 022324 186 FP-----SREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRM----------------------------H 232 (299)
Q Consensus 186 ~~-----~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~----------------------------~ 232 (299)
.. .+...+. .+++++++..+++++.|+.|++||+++++....+.. |
T Consensus 152 ~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (366)
T 3k26_A 152 AIFGGVEGHRDEVL-SADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIH 230 (366)
T ss_dssp EEECSTTSCSSCEE-EEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSC
T ss_pred EEecccccccCcee-EEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCC
Confidence 32 3444433 568889899999999999999999998776554443 8
Q ss_pred CCceeEEEeCCCCeEEEEeCCCcEEEEeCCCCce--------------EEEeeccCCCCcEEEEEccCC--CCeEEeeec
Q 022324 233 CAPVTSLSLSEDQLIISGSSLGSIAISGLSSDQR--------------VATLRSTDCTGHIICLMYPQF--LHMLFFLCF 296 (299)
Q Consensus 233 ~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~--------------~~~~~~~~~~~~i~~~~~s~~--g~~l~s~s~ 296 (299)
...|.+++|+ ++++++++.|+.|++||+++++. +..+..|.. .|++++|+|+ +++|++|+.
T Consensus 231 ~~~v~~~~~~-~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~v~~~~~s~~~~~~~l~~~~~ 307 (366)
T 3k26_A 231 RNYVDCVRWL-GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQC--DIWYMRFSMDFWQKMLALGNQ 307 (366)
T ss_dssp SSCCCEEEEE-TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSC--CSSCCCCEECTTSSEEEEECT
T ss_pred cceEEEEEEc-CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCC--cEEEEEEcCCCCCcEEEEEec
Confidence 8999999998 66899999999999999987644 778888887 8999999999 999999976
Q ss_pred cc
Q 022324 297 LP 298 (299)
Q Consensus 297 ~~ 298 (299)
.+
T Consensus 308 dg 309 (366)
T 3k26_A 308 VG 309 (366)
T ss_dssp TS
T ss_pred CC
Confidence 43
No 98
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.95 E-value=2.3e-26 Score=188.76 Aligned_cols=224 Identities=13% Similarity=0.100 Sum_probs=177.3
Q ss_pred hhccCccchhhHHHhhhhHHHHhhhhhHHHHHHhhhcCCCCCCCchhhhhhhhhhhccccceeecCceeeEEeeccccCe
Q 022324 36 FSSLGFFDLVRCSAVCKSWNAIINRCKLLQLLYCKLHGFSNTSGSSMRLHLEELAMKHHRFALEEGRIDIDQWKAHSVGV 115 (299)
Q Consensus 36 ~~~~~h~~~v~~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~h~~~i 115 (299)
..+.+|.+.|+++++ ++++++++ ...|+.+++| ++ ........+..|...|
T Consensus 12 ~~l~~h~~~v~~~~~-~~~~~l~s----------------~~~dg~v~vw--~~----------~~~~~~~~~~~~~~~v 62 (313)
T 3odt_A 12 ATLKGHDQDVRDVVA-VDDSKVAS----------------VSRDGTVRLW--SK----------DDQWLGTVVYTGQGFL 62 (313)
T ss_dssp EEECCCSSCEEEEEE-EETTEEEE----------------EETTSEEEEE--EE----------SSSEEEEEEEECSSCE
T ss_pred HHhhCCCCCcEEEEe-cCCCEEEE----------------EEcCCcEEEE--EC----------CCCEEEEEeecCCccE
Confidence 356689999999999 88888886 3367778888 32 1223345568899999
Q ss_pred eEEEe-cCC-EEEEEeCCCcEEEEecCCc---eeEEEecCCCceeE-EEEecCCCEEE-EEcCCeEEEEecCCceeeeec
Q 022324 116 DQCRM-KRG-LILTGVGDKVMRLWSLEGY---KCVEEYSLPNAASL-VDFDFDESKIV-GLIGTRICIWRRNGLRSVFPS 188 (299)
Q Consensus 116 ~~~~~-~~~-~l~s~~~dg~i~iwd~~~~---~~~~~~~~~~~~~~-~~~~~~~~~l~-~~~d~~i~v~d~~~~~~~~~~ 188 (299)
.++.| +++ +|++++.||.|++|++... +.+..+..|...+. ++| +++.++ ++.|+.|++||.......+..
T Consensus 63 ~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d~~~~~~~~~~ 140 (313)
T 3odt_A 63 NSVCYDSEKELLLFGGKDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWKEGSLVYNLQA 140 (313)
T ss_dssp EEEEEETTTTEEEEEETTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTEEEEEEEC
T ss_pred EEEEECCCCCEEEEecCCCeEEEEEeeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEcCCcEEEeccc
Confidence 99999 555 9999999999999998754 55667776665554 777 566777 999999999994444455666
Q ss_pred cCCccceeeeecc-CCCeEEEecCCCcEEEEEcCCcceeeeccc-cCCceeEEEeCCCCeEEEEeCCCcEEEEeCCCCce
Q 022324 189 REGTFMKGLCMRY-FDPEAVVGCEDGTARVFDMYSRKCSQIIRM-HCAPVTSLSLSEDQLIISGSSLGSIAISGLSSDQR 266 (299)
Q Consensus 189 ~~~~~~~~~~~~~-~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~-~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~ 266 (299)
+...... +++.+ ++..+++++.|+.|++||. .+....+.. |...|.+++|+|+..+++++.||.|++||++++++
T Consensus 141 ~~~~v~~-~~~~~~~~~~l~~~~~d~~i~i~d~--~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~ 217 (313)
T 3odt_A 141 HNASVWD-AKVVSFSENKFLTASADKTIKLWQN--DKVIKTFSGIHNDVVRHLAVVDDGHFISCSNDGLIKLVDMHTGDV 217 (313)
T ss_dssp CSSCEEE-EEEEETTTTEEEEEETTSCEEEEET--TEEEEEECSSCSSCEEEEEEEETTEEEEEETTSEEEEEETTTCCE
T ss_pred CCCceeE-EEEccCCCCEEEEEECCCCEEEEec--CceEEEEeccCcccEEEEEEcCCCeEEEccCCCeEEEEECCchhh
Confidence 6665543 35555 7888999999999999994 455666665 88999999999994499999999999999999999
Q ss_pred EEEeeccCCCCcEEEEEccCCCCeEEeeec
Q 022324 267 VATLRSTDCTGHIICLMYPQFLHMLFFLCF 296 (299)
Q Consensus 267 ~~~~~~~~~~~~i~~~~~s~~g~~l~s~s~ 296 (299)
+..+..|.. +|++++|+|++ .|++++.
T Consensus 218 ~~~~~~~~~--~i~~~~~~~~~-~l~~~~~ 244 (313)
T 3odt_A 218 LRTYEGHES--FVYCIKLLPNG-DIVSCGE 244 (313)
T ss_dssp EEEEECCSS--CEEEEEECTTS-CEEEEET
T ss_pred hhhhhcCCc--eEEEEEEecCC-CEEEEec
Confidence 999998888 99999999999 5777764
No 99
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.94 E-value=2e-25 Score=189.81 Aligned_cols=190 Identities=17% Similarity=0.231 Sum_probs=152.2
Q ss_pred EEeeccccCeeEEEe-c-CC-EEEEEeCCCcEEEEecCCceeEEEec-------------CCC-ceeEEEEec-CCCEEE
Q 022324 106 DQWKAHSVGVDQCRM-K-RG-LILTGVGDKVMRLWSLEGYKCVEEYS-------------LPN-AASLVDFDF-DESKIV 167 (299)
Q Consensus 106 ~~~~~h~~~i~~~~~-~-~~-~l~s~~~dg~i~iwd~~~~~~~~~~~-------------~~~-~~~~~~~~~-~~~~l~ 167 (299)
..+.+|.+.|+++.| + ++ +|++|+.||.|++||+.+++....+. .|. .+..++|+| ++.+++
T Consensus 37 ~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~ 116 (408)
T 4a11_B 37 DVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFT 116 (408)
T ss_dssp EECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEE
T ss_pred eeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEE
Confidence 345789999999999 5 55 99999999999999999876544433 244 455599999 677787
Q ss_pred -EEcCCeEEEEecCCceeeeeccCCccceeeeeccCCC---eEEEecCCCcEEEEEcCCcceeeeccccCCceeEEEeCC
Q 022324 168 -GLIGTRICIWRRNGLRSVFPSREGTFMKGLCMRYFDP---EAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSE 243 (299)
Q Consensus 168 -~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~---~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~ 243 (299)
++.|+.|++||+.+.+.............+++.+.++ .+++++.++.|++||+++++.+..+..|...|.+++|+|
T Consensus 117 s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~ 196 (408)
T 4a11_B 117 SSSFDKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWSP 196 (408)
T ss_dssp EEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEEECS
T ss_pred EEeCCCeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEEECC
Confidence 8899999999999876433222222223456666544 699999999999999999999999989999999999999
Q ss_pred C-C-eEEEEeCCCcEEEEeCCCCc-eEEEe---------------eccCCCCcEEEEEccCCCCeEEeeecc
Q 022324 244 D-Q-LIISGSSLGSIAISGLSSDQ-RVATL---------------RSTDCTGHIICLMYPQFLHMLFFLCFL 297 (299)
Q Consensus 244 ~-~-~l~~~~~dg~i~iwd~~~~~-~~~~~---------------~~~~~~~~i~~~~~s~~g~~l~s~s~~ 297 (299)
+ . ++++++.||.|++||+++++ ++..+ ..|.. .|.+++|+|++++|++++.-
T Consensus 197 ~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~l~~~~~d 266 (408)
T 4a11_B 197 RYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNG--KVNGLCFTSDGLHLLTVGTD 266 (408)
T ss_dssp SCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSS--CEEEEEECTTSSEEEEEETT
T ss_pred CCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccC--ceeEEEEcCCCCEEEEecCC
Confidence 8 5 69999999999999998765 44554 34555 89999999999999999854
No 100
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.94 E-value=2.6e-25 Score=189.51 Aligned_cols=188 Identities=12% Similarity=0.133 Sum_probs=154.1
Q ss_pred eEEeeccccCeeEEEe-c-CC-EEEEEeCCCcEEEEecCCc-------eeEEEecCCCceeE-EEEecCC-CEEE-EEcC
Q 022324 105 IDQWKAHSVGVDQCRM-K-RG-LILTGVGDKVMRLWSLEGY-------KCVEEYSLPNAASL-VDFDFDE-SKIV-GLIG 171 (299)
Q Consensus 105 ~~~~~~h~~~i~~~~~-~-~~-~l~s~~~dg~i~iwd~~~~-------~~~~~~~~~~~~~~-~~~~~~~-~~l~-~~~d 171 (299)
+..+.+|.+.|+++.| + ++ +|++|+.||+|++||+.++ +++..+..|...+. ++|+|++ ++++ ++.|
T Consensus 74 ~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~d 153 (402)
T 2aq5_A 74 VPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCD 153 (402)
T ss_dssp CCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETT
T ss_pred CceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCC
Confidence 3456899999999999 5 55 9999999999999999987 56777887765554 9999998 5777 9999
Q ss_pred CeEEEEecCCceeeee----ccCCccceeeeeccCCCeEEEecCCCcEEEEEcCCcceeeec-cccCCc-eeEEEeCCC-
Q 022324 172 TRICIWRRNGLRSVFP----SREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQII-RMHCAP-VTSLSLSED- 244 (299)
Q Consensus 172 ~~i~v~d~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~-~~~~~~-i~~~~~~~~- 244 (299)
+.|++||+++++.... .+.+.+. .++|++++..+++++.|+.|++||+++++.+..+ ..|.+. +.++.|+|+
T Consensus 154 g~i~iwd~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (402)
T 2aq5_A 154 NVILVWDVGTGAAVLTLGPDVHPDTIY-SVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEG 232 (402)
T ss_dssp SCEEEEETTTTEEEEEECTTTCCSCEE-EEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTT
T ss_pred CEEEEEECCCCCccEEEecCCCCCceE-EEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCC
Confidence 9999999998864333 3444433 5689999999999999999999999999998888 677765 899999999
Q ss_pred CeEEEE---eCCCcEEEEeCCCCce-EEEee-ccCCCCcEEEEEccCCCCeEEeee
Q 022324 245 QLIISG---SSLGSIAISGLSSDQR-VATLR-STDCTGHIICLMYPQFLHMLFFLC 295 (299)
Q Consensus 245 ~~l~~~---~~dg~i~iwd~~~~~~-~~~~~-~~~~~~~i~~~~~s~~g~~l~s~s 295 (299)
.+|++| +.|+.|++||+++++. +.... .+.. .+.+++|+|++++|++++
T Consensus 233 ~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~--~v~~~~~s~~~~~l~~~g 286 (402)
T 2aq5_A 233 KILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSS--GVLLPFFDPDTNIVYLCG 286 (402)
T ss_dssp EEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCS--SCEEEEEETTTTEEEEEE
T ss_pred cEEEEeccCCCCceEEEEcCccccCCceEEeccCCC--ceeEEEEcCCCCEEEEEE
Confidence 888888 7899999999998764 33333 2333 799999999999997544
No 101
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.94 E-value=5.6e-26 Score=203.33 Aligned_cols=229 Identities=14% Similarity=0.120 Sum_probs=186.3
Q ss_pred CccchhhHHHhhhhHHHHhhhhhHHHHHHhhhcCCCCCCCchhhhhhhhhhhccccceeecCceeeEEeeccccC-eeEE
Q 022324 40 GFFDLVRCSAVCKSWNAIINRCKLLQLLYCKLHGFSNTSGSSMRLHLEELAMKHHRFALEEGRIDIDQWKAHSVG-VDQC 118 (299)
Q Consensus 40 ~h~~~v~~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~h~~~-i~~~ 118 (299)
.|.+.|.+++|+|++++++.. .+..+++| ++.... ........+.+|.+. |+++
T Consensus 16 ~~~~~v~~~~~spdg~~l~~~-----------------~~~~v~v~--~~~~~~------~~~~~~~~~~~h~~~~v~~~ 70 (615)
T 1pgu_A 16 TQRNFTTHLSYDPTTNAIAYP-----------------CGKSAFVR--CLDDGD------SKVPPVVQFTGHGSSVVTTV 70 (615)
T ss_dssp CCTTCCCCCEEETTTTEEEEE-----------------ETTEEEEE--ECCSSC------CSSCSEEEECTTTTSCEEEE
T ss_pred CccCceeEEEECCCCCEEEEe-----------------cCCeEEEE--ECCCCC------CccccceEEecCCCceEEEE
Confidence 688899999999999998861 23455666 222110 000235667899999 9999
Q ss_pred Ee-c--CC-EEEEEeCCCcEEEEecCCc--------eeEEEecCCCcee-EEEEecCCCEEE-EEcC----CeEEEEecC
Q 022324 119 RM-K--RG-LILTGVGDKVMRLWSLEGY--------KCVEEYSLPNAAS-LVDFDFDESKIV-GLIG----TRICIWRRN 180 (299)
Q Consensus 119 ~~-~--~~-~l~s~~~dg~i~iwd~~~~--------~~~~~~~~~~~~~-~~~~~~~~~~l~-~~~d----~~i~v~d~~ 180 (299)
.| + ++ +|++|+.||.|++||+.++ +....+..+...+ .++|+|+++.++ ++.+ +.|++||..
T Consensus 71 ~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d~~ 150 (615)
T 1pgu_A 71 KFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSG 150 (615)
T ss_dssp EECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETTTC
T ss_pred EECcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEECC
Confidence 99 6 66 9999999999999999855 6677777665555 499999999999 7766 699999965
Q ss_pred CceeeeeccCCccceeeeeccCCC-eEEEecCCCcEEEEEcCCcceeeeccccCC---ceeEEEeCCC--CeEEEEeCCC
Q 022324 181 GLRSVFPSREGTFMKGLCMRYFDP-EAVVGCEDGTARVFDMYSRKCSQIIRMHCA---PVTSLSLSED--QLIISGSSLG 254 (299)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~-~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~---~i~~~~~~~~--~~l~~~~~dg 254 (299)
.....+..+...+. .++++++++ .+++++.|+.|++||+.+++.+..+..|.. .|.+++|+|+ ++|++++.||
T Consensus 151 ~~~~~~~~~~~~v~-~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg 229 (615)
T 1pgu_A 151 NSLGEVSGHSQRIN-ACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDR 229 (615)
T ss_dssp CEEEECCSCSSCEE-EEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTC
T ss_pred CcceeeecCCccEE-EEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCC
Confidence 55556666666544 568889888 699999999999999999999999988988 9999999987 7899999999
Q ss_pred cEEEEeCCCCceEEEe-e---ccCCCCcEEEEEccCCCCeEEeeecc
Q 022324 255 SIAISGLSSDQRVATL-R---STDCTGHIICLMYPQFLHMLFFLCFL 297 (299)
Q Consensus 255 ~i~iwd~~~~~~~~~~-~---~~~~~~~i~~~~~s~~g~~l~s~s~~ 297 (299)
.|++||+++++.+..+ . .|.. .|.+++|+ ++++|++++.-
T Consensus 230 ~i~vwd~~~~~~~~~~~~~~~~~~~--~v~~~~~~-~~~~l~~~~~d 273 (615)
T 1pgu_A 230 KISCFDGKSGEFLKYIEDDQEPVQG--GIFALSWL-DSQKFATVGAD 273 (615)
T ss_dssp CEEEEETTTCCEEEECCBTTBCCCS--CEEEEEES-SSSEEEEEETT
T ss_pred eEEEEECCCCCEeEEecccccccCC--ceEEEEEc-CCCEEEEEcCC
Confidence 9999999999999999 5 6666 89999999 99999998853
No 102
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.94 E-value=1.4e-26 Score=207.24 Aligned_cols=264 Identities=13% Similarity=0.069 Sum_probs=204.2
Q ss_pred cchhccCcHHHH----HHHhhccCccch-hhHHHhhh--hHHHHhh-----hhhHHHHHHh--------hhcCCCCCCCc
Q 022324 21 RATIESLNGDII----CMIFSSLGFFDL-VRCSAVCK--SWNAIIN-----RCKLLQLLYC--------KLHGFSNTSGS 80 (299)
Q Consensus 21 ~~~~~~~~~~~~----~~i~~~~~h~~~-v~~~~~~~--~~~~l~~-----~~~~w~~~~~--------~~~~~~~~~d~ 80 (299)
...+.+|+.+.. ..+..+.+|.+. |.+++|+| +++++++ .+.+|+.... ...... ...
T Consensus 38 ~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~--~~~ 115 (615)
T 1pgu_A 38 GKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEF--QVL 115 (615)
T ss_dssp TTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEE--ECC
T ss_pred CCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchh--hcc
Confidence 457888998877 677788899999 99999999 9999987 4566765211 000000 001
Q ss_pred hhhhhhhhhhhccccceeecCce---------------eeEEeeccccCeeEEEe-cCC--EEEEEeCCCcEEEEecCCc
Q 022324 81 SMRLHLEELAMKHHRFALEEGRI---------------DIDQWKAHSVGVDQCRM-KRG--LILTGVGDKVMRLWSLEGY 142 (299)
Q Consensus 81 ~~~~~~~~~~~~~~~~~l~~g~~---------------~~~~~~~h~~~i~~~~~-~~~--~l~s~~~dg~i~iwd~~~~ 142 (299)
. -.+.++.++|+++.++.+.. .+..+.+|...|.++.| +++ ++++++.|+.|++||..++
T Consensus 116 ~--~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~ 193 (615)
T 1pgu_A 116 A--GPISDISWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPF 193 (615)
T ss_dssp S--SCEEEEEECTTSSEEEEEECCSSCSEEEEETTTCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTB
T ss_pred c--ccEEEEEEeCCCCEEEEeccCCCCccEEEEEECCCcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCc
Confidence 1 11235566777766654432 25677899999999999 555 7999999999999999999
Q ss_pred eeEEEecCCCc----eeEEEEecC-CCEEE-EEcCCeEEEEecCCceeeee------ccCCccceeeeeccCCCeEEEec
Q 022324 143 KCVEEYSLPNA----ASLVDFDFD-ESKIV-GLIGTRICIWRRNGLRSVFP------SREGTFMKGLCMRYFDPEAVVGC 210 (299)
Q Consensus 143 ~~~~~~~~~~~----~~~~~~~~~-~~~l~-~~~d~~i~v~d~~~~~~~~~------~~~~~~~~~~~~~~~~~~l~s~~ 210 (299)
+.+..+..|.. +..++|+|+ +++++ ++.|+.|++||+.+++.... .+...+. .++++ ++..+++++
T Consensus 194 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~-~~~~~-~~~~l~~~~ 271 (615)
T 1pgu_A 194 KFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIF-ALSWL-DSQKFATVG 271 (615)
T ss_dssp EEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEE-EEEES-SSSEEEEEE
T ss_pred ceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEecccccccCCceE-EEEEc-CCCEEEEEc
Confidence 99999997765 555999999 99998 99999999999988764332 3333333 45677 788899999
Q ss_pred CCCcEEEEEcCCcceeeecccc----CCceeEEEeCCCCeEEEEeCCCcEEEEeCCCCceEEEeeccCCCCcEEEEEccC
Q 022324 211 EDGTARVFDMYSRKCSQIIRMH----CAPVTSLSLSEDQLIISGSSLGSIAISGLSSDQRVATLRSTDCTGHIICLMYPQ 286 (299)
Q Consensus 211 ~d~~i~iwd~~~~~~~~~~~~~----~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~ 286 (299)
.|+.|++||+++++.+..+..+ ...+.++.+..+.++++++.||.|++||+++++.+..+..|.. .|.+++| |
T Consensus 272 ~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~--~v~~~~~-~ 348 (615)
T 1pgu_A 272 ADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYELGHDEVLKTISGHNK--GITALTV-N 348 (615)
T ss_dssp TTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEETTEEEEEETTSCEEEEETTEEEEEEEECCCSS--CEEEEET-T
T ss_pred CCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeCCCCeEEEEECCCCEEEEECCCCcEEEEEeCCCC--CEEEEEe-c
Confidence 9999999999999988888755 4678888886448999999999999999999999999988887 8999998 7
Q ss_pred CCCeEEeeec
Q 022324 287 FLHMLFFLCF 296 (299)
Q Consensus 287 ~g~~l~s~s~ 296 (299)
+ |++++.
T Consensus 349 ~---l~~~~~ 355 (615)
T 1pgu_A 349 P---LISGSY 355 (615)
T ss_dssp T---TEEEET
T ss_pred C---cEEECC
Confidence 7 555553
No 103
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.94 E-value=5.8e-25 Score=204.56 Aligned_cols=184 Identities=9% Similarity=0.035 Sum_probs=155.0
Q ss_pred eccccCeeEEEe-cCC-EEEEEeCCCcEEEEecCCceeEEEecCCCceeEEEEecCCCEEE-EEcCCeEEEEecCCceee
Q 022324 109 KAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIV-GLIGTRICIWRRNGLRSV 185 (299)
Q Consensus 109 ~~h~~~i~~~~~-~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~d~~i~v~d~~~~~~~ 185 (299)
.+|.+.|++++| +++ +|++|+.||+|++|+..+.+....+.....+..++|+| +++|+ ++.|++|++||+.+++..
T Consensus 14 ~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~~~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~~~~ 92 (902)
T 2oaj_A 14 YGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKLEDRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYSQKVL 92 (902)
T ss_dssp EECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEECSSCCCEEEEEEET-TTEEEEEETTCEEEEEETTTCSEE
T ss_pred cCCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEEcCCCCCEEEEEEcC-CCEEEEEECcCeEEEEECCCCcEE
Confidence 589999999999 666 99999999999999999888877766556677799999 77777 999999999999887532
Q ss_pred ee-ccCCccceeeeeccCCCeEEEecCCCcEEEEEcCCccee-----------eeccccCCceeEEEeCCC--CeEEEEe
Q 022324 186 FP-SREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCS-----------QIIRMHCAPVTSLSLSED--QLIISGS 251 (299)
Q Consensus 186 ~~-~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~-----------~~~~~~~~~i~~~~~~~~--~~l~~~~ 251 (299)
.. .+.+. ...+++++++.++++|+.||.|++||+++++.. ..+.+|.++|.+++|+|+ ..+++|+
T Consensus 93 ~~~~~~~~-V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~ 171 (902)
T 2oaj_A 93 TTVFVPGK-ITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISY 171 (902)
T ss_dssp EEEECSSC-EEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEEC
T ss_pred EEEcCCCC-EEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEEEEEe
Confidence 21 23333 335689999999999999999999999987653 234578899999999996 7899999
Q ss_pred CCCcEEEEeCCCCceEEEeecc------------------CCCCcEEEEEccCCCCeEEeeecc
Q 022324 252 SLGSIAISGLSSDQRVATLRST------------------DCTGHIICLMYPQFLHMLFFLCFL 297 (299)
Q Consensus 252 ~dg~i~iwd~~~~~~~~~~~~~------------------~~~~~i~~~~~s~~g~~l~s~s~~ 297 (299)
.||.| +||+++++++..+..+ .. .|++++|+|+|++|++|+.-
T Consensus 172 ~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~--~V~~v~fspdg~~lasgs~D 232 (902)
T 2oaj_A 172 EYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTP--KVIQSLYHPNSLHIITIHED 232 (902)
T ss_dssp SSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCC--CEEEEEECTTSSEEEEEETT
T ss_pred CCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCC--CeEEEEEcCCCCEEEEEECC
Confidence 99999 9999999999888765 23 79999999999999999864
No 104
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.94 E-value=8.4e-26 Score=187.93 Aligned_cols=229 Identities=10% Similarity=0.007 Sum_probs=173.7
Q ss_pred cCccchhhHHHhhhhHHHHhhhhhHHHHHHhhhcCCCCCCCchhhhhhhhhhhccccceeecCceeeEEeeccccCeeEE
Q 022324 39 LGFFDLVRCSAVCKSWNAIINRCKLLQLLYCKLHGFSNTSGSSMRLHLEELAMKHHRFALEEGRIDIDQWKAHSVGVDQC 118 (299)
Q Consensus 39 ~~h~~~v~~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~h~~~i~~~ 118 (299)
.+|.+.|.+++|+|+++++++ ...|+.+++|.. .... .......+.+|...|.++
T Consensus 8 ~~h~~~v~~~~~s~~~~~l~~----------------~~~d~~v~iw~~--~~~~-------~~~~~~~~~~~~~~v~~~ 62 (342)
T 1yfq_A 8 QAPKDYISDIKIIPSKSLLLI----------------TSWDGSLTVYKF--DIQA-------KNVDLLQSLRYKHPLLCC 62 (342)
T ss_dssp SCCSSCEEEEEEEGGGTEEEE----------------EETTSEEEEEEE--ETTT-------TEEEEEEEEECSSCEEEE
T ss_pred cCCCCcEEEEEEcCCCCEEEE----------------EcCCCeEEEEEe--CCCC-------ccccceeeeecCCceEEE
Confidence 379999999999999998886 225677777732 2111 011234456899999999
Q ss_pred Ee-c-CC-EEEEEeCCCcEEEEec-CCceeEEEecC--CCcee-EEEEecCCCEEE-EEcCCeEEEEecCC---------
Q 022324 119 RM-K-RG-LILTGVGDKVMRLWSL-EGYKCVEEYSL--PNAAS-LVDFDFDESKIV-GLIGTRICIWRRNG--------- 181 (299)
Q Consensus 119 ~~-~-~~-~l~s~~~dg~i~iwd~-~~~~~~~~~~~--~~~~~-~~~~~~~~~~l~-~~~d~~i~v~d~~~--------- 181 (299)
.| + +. +|++|+.||.|++||+ .+++. ..+.. |...+ .++|+| ++.++ ++.|+.|++||+++
T Consensus 63 ~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~-~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~ 140 (342)
T 1yfq_A 63 NFIDNTDLQIYVGTVQGEILKVDLIGSPSF-QALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVK 140 (342)
T ss_dssp EEEESSSEEEEEEETTSCEEEECSSSSSSE-EECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEE
T ss_pred EECCCCCcEEEEEcCCCeEEEEEeccCCce-EeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEccccccccccccc
Confidence 99 4 44 7999999999999999 87765 55565 65544 599999 88888 99999999999886
Q ss_pred ceeeeec-cCCccceeeeeccCCCeEEEecCCCcEEEEEcCC-cce--eeeccccCCceeEEEeCC-C-CeEEEEeCCCc
Q 022324 182 LRSVFPS-REGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYS-RKC--SQIIRMHCAPVTSLSLSE-D-QLIISGSSLGS 255 (299)
Q Consensus 182 ~~~~~~~-~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~-~~~--~~~~~~~~~~i~~~~~~~-~-~~l~~~~~dg~ 255 (299)
.+..... +... +.++.+.+..+++++.|+.|++||+++ +.. ......|...|.+++|+| + +++++++.||.
T Consensus 141 ~~~~~~~~~~~~---v~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~ 217 (342)
T 1yfq_A 141 NLNSNNTKVKNK---IFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGR 217 (342)
T ss_dssp ESCSSSSSSCCC---EEEEEECSSEEEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSE
T ss_pred CCeeeEEeeCCc---eEEEEecCCcEEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCc
Confidence 4322111 2222 334444444499999999999999997 543 233346788999999999 8 99999999999
Q ss_pred EEEEeCCCC------ceEEEeeccCC-------CCcEEEEEccCCCCeEEeeecc
Q 022324 256 IAISGLSSD------QRVATLRSTDC-------TGHIICLMYPQFLHMLFFLCFL 297 (299)
Q Consensus 256 i~iwd~~~~------~~~~~~~~~~~-------~~~i~~~~~s~~g~~l~s~s~~ 297 (299)
|++|+++.. +....+..|.. ...|.+++|+|++++|++|+.-
T Consensus 218 i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d 272 (342)
T 1yfq_A 218 VAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSD 272 (342)
T ss_dssp EEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETT
T ss_pred EEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCC
Confidence 999999887 77888887743 1279999999999999999854
No 105
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.94 E-value=1.4e-24 Score=187.14 Aligned_cols=185 Identities=8% Similarity=0.116 Sum_probs=148.0
Q ss_pred ccccCeeEEEe-cCC-EEEEEeCCCcEEEEecCCce-----------eEEEecCCC-------------ceeEEEEecCC
Q 022324 110 AHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYK-----------CVEEYSLPN-------------AASLVDFDFDE 163 (299)
Q Consensus 110 ~h~~~i~~~~~-~~~-~l~s~~~dg~i~iwd~~~~~-----------~~~~~~~~~-------------~~~~~~~~~~~ 163 (299)
.|.+.|++++| +++ +|++|+.||.|++||+.+++ ....+..|. .+..++|+|++
T Consensus 26 ~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~ 105 (447)
T 3dw8_B 26 AEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQK 105 (447)
T ss_dssp CGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCC
T ss_pred cccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCC
Confidence 46889999999 666 99999999999999999876 577788774 34559999998
Q ss_pred --CEEE-EEcCCeEEEEecCCcee-----------------------------------------e-eeccCCccceeee
Q 022324 164 --SKIV-GLIGTRICIWRRNGLRS-----------------------------------------V-FPSREGTFMKGLC 198 (299)
Q Consensus 164 --~~l~-~~~d~~i~v~d~~~~~~-----------------------------------------~-~~~~~~~~~~~~~ 198 (299)
..++ ++.|+.|++||+.+... . ...|...+. .++
T Consensus 106 ~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~-~~~ 184 (447)
T 3dw8_B 106 NAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHIN-SIS 184 (447)
T ss_dssp SSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCC-EEE
T ss_pred CcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceE-EEE
Confidence 6777 99999999999876432 1 123444433 468
Q ss_pred eccCCCeEEEecCCCcEEEEEcCC-cceee-------eccccCCceeEEEeCCC--CeEEEEeCCCcEEEEeCCCCce--
Q 022324 199 MRYFDPEAVVGCEDGTARVFDMYS-RKCSQ-------IIRMHCAPVTSLSLSED--QLIISGSSLGSIAISGLSSDQR-- 266 (299)
Q Consensus 199 ~~~~~~~l~s~~~d~~i~iwd~~~-~~~~~-------~~~~~~~~i~~~~~~~~--~~l~~~~~dg~i~iwd~~~~~~-- 266 (299)
|++++..+++| .|+.|++||+++ ++.+. .+..|...|.+++|+|+ .+|++|+.||.|++||+++++.
T Consensus 185 ~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~ 263 (447)
T 3dw8_B 185 INSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCD 263 (447)
T ss_dssp ECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSC
T ss_pred EcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCcccc
Confidence 89999999998 799999999994 44444 35688999999999997 7999999999999999999886
Q ss_pred --EEEeeccCCC----------CcEEEEEccCCCCeEEeeec
Q 022324 267 --VATLRSTDCT----------GHIICLMYPQFLHMLFFLCF 296 (299)
Q Consensus 267 --~~~~~~~~~~----------~~i~~~~~s~~g~~l~s~s~ 296 (299)
+..+..+... ..|.+++|+|+|++|++++.
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~ 305 (447)
T 3dw8_B 264 RHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY 305 (447)
T ss_dssp TTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES
T ss_pred ceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC
Confidence 7788776531 16999999999999999875
No 106
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.94 E-value=4.9e-26 Score=196.30 Aligned_cols=177 Identities=9% Similarity=0.024 Sum_probs=141.8
Q ss_pred ccccCeeEEEe-cCC-EEEEEeCCCcEEEEecCCceeEEEecCCCc------eeEEEEecCCCEEE-EEcCCeEEEEecC
Q 022324 110 AHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNA------ASLVDFDFDESKIV-GLIGTRICIWRRN 180 (299)
Q Consensus 110 ~h~~~i~~~~~-~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~------~~~~~~~~~~~~l~-~~~d~~i~v~d~~ 180 (299)
.|...|.+++| |++ +|++++.||+|++||.+. ++..+. |+. +.+++|+|+|++|+ ++.||+|++||+.
T Consensus 83 ~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~ 159 (588)
T 2j04_A 83 QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIR 159 (588)
T ss_dssp SCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECC
T ss_pred CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECC
Confidence 56889999999 777 999999999999999654 666666 553 55699999999999 9999999999998
Q ss_pred Cce---------eee----eccCCccceeeeeccCCCeEEEecCCCcEEEEEcCCcce---eeec-cccCCceeEEEeCC
Q 022324 181 GLR---------SVF----PSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKC---SQII-RMHCAPVTSLSLSE 243 (299)
Q Consensus 181 ~~~---------~~~----~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~---~~~~-~~~~~~i~~~~~~~ 243 (299)
++. ..+ ..|.+.+. .++|+|++ +++++.|+.|++||+..++. ...+ ..|...|.+++|+
T Consensus 160 ~~~l~~~~~i~l~ti~~~~~gh~~~V~-sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs- 235 (588)
T 2j04_A 160 KNSENTPEFYFESSIRLSDAGSKDWVT-HIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV- 235 (588)
T ss_dssp CCTTTCCCCEEEEEEECSCTTCCCCEE-EEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE-
T ss_pred CCccccccceeeeeeecccccccccEE-EEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE-
Confidence 763 122 22233333 45888887 88899999999999987763 2455 3678899999999
Q ss_pred CCeEEEEeCCCcEEEEeCCCCceEEEeeccCCCCcEEEEEc--cCCCCeEEeeec
Q 022324 244 DQLIISGSSLGSIAISGLSSDQRVATLRSTDCTGHIICLMY--PQFLHMLFFLCF 296 (299)
Q Consensus 244 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~--s~~g~~l~s~s~ 296 (299)
++.||+++ ++.|++||+.+++......+|.. .|..++| +|+++.|++++.
T Consensus 236 g~~LASa~-~~tIkLWd~~~~~~~~~~~gh~~--~V~~va~~~s~d~~~La~a~e 287 (588)
T 2j04_A 236 DYKVVLTC-PGYVHKIDLKNYSISSLKTGSLE--NFHIIPLNHEKESTILLMSNK 287 (588)
T ss_dssp TTEEEEEC-SSEEEEEETTTTEEEEEECSCCS--CCCEEEETTCSSCEEEEECSS
T ss_pred CCEEEEEe-CCeEEEEECCCCeEEEEEcCCCc--eEEEEEeeeCCCCCEEEEEcC
Confidence 77888887 69999999987776444436777 8999999 999999998873
No 107
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.94 E-value=3.6e-24 Score=177.81 Aligned_cols=189 Identities=12% Similarity=0.118 Sum_probs=154.2
Q ss_pred EeeccccCeeEEEe-cCC-EEEEEeCCCcEEEEecCCc----eeEEEecCCCcee-EEEEec--CCCEEE-EEcCCeEEE
Q 022324 107 QWKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGY----KCVEEYSLPNAAS-LVDFDF--DESKIV-GLIGTRICI 176 (299)
Q Consensus 107 ~~~~h~~~i~~~~~-~~~-~l~s~~~dg~i~iwd~~~~----~~~~~~~~~~~~~-~~~~~~--~~~~l~-~~~d~~i~v 176 (299)
.+.+|.+.|+++.| +++ +|++|+.||.|++||+.++ +....+..|...+ .++|+| ++++|+ ++.|+.|++
T Consensus 6 ~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~v 85 (351)
T 3f3f_A 6 FDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKL 85 (351)
T ss_dssp EECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEE
T ss_pred cCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEE
Confidence 45799999999999 666 9999999999999999876 4666777776554 599999 588888 999999999
Q ss_pred EecCCce-----------eeeeccCCccceeeeeccC--CCeEEEecCCCcEEEEEcCCcceeeecc-------------
Q 022324 177 WRRNGLR-----------SVFPSREGTFMKGLCMRYF--DPEAVVGCEDGTARVFDMYSRKCSQIIR------------- 230 (299)
Q Consensus 177 ~d~~~~~-----------~~~~~~~~~~~~~~~~~~~--~~~l~s~~~d~~i~iwd~~~~~~~~~~~------------- 230 (299)
||+++.. ..+..+.+.+. .++++++ +..+++++.|+.|++||+++++.+..+.
T Consensus 86 wd~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 164 (351)
T 3f3f_A 86 WEEDPDQEECSGRRWNKLCTLNDSKGSLY-SVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPA 164 (351)
T ss_dssp EEECTTSCTTSSCSEEEEEEECCCSSCEE-EEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCS
T ss_pred EecCCCcccccccCcceeeeecccCCcee-EEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccC
Confidence 9998752 23344444443 4688888 8889999999999999999877654443
Q ss_pred ccCCceeEEEeCCC----CeEEEEeCCCcEEEEeCCCCce--EEEeeccCCCCcEEEEEccCCC----CeEEeeeccc
Q 022324 231 MHCAPVTSLSLSED----QLIISGSSLGSIAISGLSSDQR--VATLRSTDCTGHIICLMYPQFL----HMLFFLCFLP 298 (299)
Q Consensus 231 ~~~~~i~~~~~~~~----~~l~~~~~dg~i~iwd~~~~~~--~~~~~~~~~~~~i~~~~~s~~g----~~l~s~s~~~ 298 (299)
.|...+.+++|+|+ .++++++.|+.+.+|+...++. +..+..|.. .|++++|+|++ ++|++|+.-+
T Consensus 165 ~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~--~i~~~~~~p~~~~~~~~l~s~~~dg 240 (351)
T 3f3f_A 165 NHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKS--LIRSISWAPSIGRWYQLIATGCKDG 240 (351)
T ss_dssp SCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCS--CEEEEEECCCSSCSSEEEEEEETTS
T ss_pred CcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCc--ceeEEEECCCCCCcceEEEEEcCCC
Confidence 57788999999983 7899999999998888887765 677777777 99999999998 8999988643
No 108
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.93 E-value=9.1e-25 Score=200.20 Aligned_cols=190 Identities=17% Similarity=0.200 Sum_probs=155.5
Q ss_pred EEeeccccCeeEEEe-cCC-EEEEEeCCCcEEEEecC--CceeEEEecCCCcee-EEEEecC--CCEEE-EEcCCeEEEE
Q 022324 106 DQWKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLE--GYKCVEEYSLPNAAS-LVDFDFD--ESKIV-GLIGTRICIW 177 (299)
Q Consensus 106 ~~~~~h~~~i~~~~~-~~~-~l~s~~~dg~i~iwd~~--~~~~~~~~~~~~~~~-~~~~~~~--~~~l~-~~~d~~i~v~ 177 (299)
.++.+|.++|+++.| +++ +|++|+.||+|++||+. +++.+..+..|...+ .++|+++ ++.++ ++.||.|++|
T Consensus 3 ~~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vw 82 (753)
T 3jro_A 3 VIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIW 82 (753)
T ss_dssp -----CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEE
T ss_pred eecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEE
Confidence 456899999999999 566 99999999999999998 567778888776555 5999988 88888 9999999999
Q ss_pred ecCCce----eeeeccCCccceeeeeccC--CCeEEEecCCCcEEEEEcCCcc--eeeeccccCCceeEEEeCC------
Q 022324 178 RRNGLR----SVFPSREGTFMKGLCMRYF--DPEAVVGCEDGTARVFDMYSRK--CSQIIRMHCAPVTSLSLSE------ 243 (299)
Q Consensus 178 d~~~~~----~~~~~~~~~~~~~~~~~~~--~~~l~s~~~d~~i~iwd~~~~~--~~~~~~~~~~~i~~~~~~~------ 243 (299)
|+.++. ..+..+...+. .++++++ +..+++|+.||.|++||++++. ....+..|...|.+++|+|
T Consensus 83 d~~~~~~~~~~~~~~h~~~V~-~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~ 161 (753)
T 3jro_A 83 KEENGRWSQIAVHAVHSASVN-SVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEED 161 (753)
T ss_dssp EEETTEEEEEEEECCCSSCEE-EEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC----
T ss_pred ECCCCcccccccccCCCCCeE-EEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccc
Confidence 998874 23334444443 5688888 8889999999999999998873 3345568899999999999
Q ss_pred -------C-CeEEEEeCCCcEEEEeCCCC----ceEEEeeccCCCCcEEEEEccCC---CCeEEeeeccc
Q 022324 244 -------D-QLIISGSSLGSIAISGLSSD----QRVATLRSTDCTGHIICLMYPQF---LHMLFFLCFLP 298 (299)
Q Consensus 244 -------~-~~l~~~~~dg~i~iwd~~~~----~~~~~~~~~~~~~~i~~~~~s~~---g~~l~s~s~~~ 298 (299)
+ .++++|+.||.|++||++++ ..+..+..|.. +|++++|+|+ +++|++|+.-+
T Consensus 162 ~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~--~V~~l~~sp~~~~~~~l~s~s~Dg 229 (753)
T 3jro_A 162 GEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSD--WVRDVAWSPTVLLRSYLASVSQDR 229 (753)
T ss_dssp -----CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSS--CEEEEEECCCCSSSEEEEEEESSS
T ss_pred cccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCC--cEEEEEeccCCCCCCEEEEEecCC
Confidence 5 89999999999999999877 56677778887 9999999999 89999998643
No 109
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.93 E-value=1.9e-25 Score=187.93 Aligned_cols=196 Identities=14% Similarity=0.114 Sum_probs=147.2
Q ss_pred CccchhhHHHhhhhHHHHhhhhhHHHHHHhhhcCCCCCCCchhhhhhhhhhhccccceeecCceeeEEeeccccCeeEEE
Q 022324 40 GFFDLVRCSAVCKSWNAIINRCKLLQLLYCKLHGFSNTSGSSMRLHLEELAMKHHRFALEEGRIDIDQWKAHSVGVDQCR 119 (299)
Q Consensus 40 ~h~~~v~~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~h~~~i~~~~ 119 (299)
++.+.+++++|+|++++++.. ....|.++++|.. .... .+..+ .|.+.|.+++
T Consensus 131 ~~~~~~~~v~fSpDg~~la~a--------------s~~~d~~i~iwd~--~~~~----------~~~~~-~~~~~V~~v~ 183 (365)
T 4h5i_A 131 NADDYTKLVYISREGTVAAIA--------------SSKVPAIMRIIDP--SDLT----------EKFEI-ETRGEVKDLH 183 (365)
T ss_dssp CTTCCEEEEEECTTSSCEEEE--------------ESCSSCEEEEEET--TTTE----------EEEEE-ECSSCCCEEE
T ss_pred CcccCEEEEEEcCCCCEEEEE--------------ECCCCCEEEEeEC--CCCc----------EEEEe-CCCCceEEEE
Confidence 345567889999999987630 0225678888833 2211 22333 4778899999
Q ss_pred e-cCC-EEEEEeCCCcEEEEecCCceeEEE--ecCCCceeE-EEEecCCCEEE-EEcCC----eEEEEecCCcee-----
Q 022324 120 M-KRG-LILTGVGDKVMRLWSLEGYKCVEE--YSLPNAASL-VDFDFDESKIV-GLIGT----RICIWRRNGLRS----- 184 (299)
Q Consensus 120 ~-~~~-~l~s~~~dg~i~iwd~~~~~~~~~--~~~~~~~~~-~~~~~~~~~l~-~~~d~----~i~v~d~~~~~~----- 184 (299)
| |++ ++++++. +.+.+|+..+++.+.. ...|...+. ++|+|+++.++ ++.++ .++.|++.....
T Consensus 184 fspdg~~l~s~s~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~ 262 (365)
T 4h5i_A 184 FSTDGKVVAYITG-SSLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRS 262 (365)
T ss_dssp ECTTSSEEEEECS-SCEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEE
T ss_pred EccCCceEEeccc-eeEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceee
Confidence 9 677 7888775 5566777777766543 334555554 99999999998 77776 688899876542
Q ss_pred -eeeccCCccceeeeeccCCCeEEEecCCCcEEEEEcCCcceeeec-cccCCceeEEEeCCC-CeEEEEeCCCcEEEEeC
Q 022324 185 -VFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQII-RMHCAPVTSLSLSED-QLIISGSSLGSIAISGL 261 (299)
Q Consensus 185 -~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~-~~~~~~i~~~~~~~~-~~l~~~~~dg~i~iwd~ 261 (299)
.+..+...+. .++++|++.+|++|+.|+.|++||+++++++..+ .+|..+|++++|+|| ++||+|+.|++|+|||+
T Consensus 263 ~~~~~~~~~V~-~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~i 341 (365)
T 4h5i_A 263 KQVTNRFKGIT-SMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKL 341 (365)
T ss_dssp EEEESSCSCEE-EEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEEC
T ss_pred eeecCCCCCeE-eEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEc
Confidence 2333444433 5689999999999999999999999999998875 689999999999999 99999999999999999
Q ss_pred CCC
Q 022324 262 SSD 264 (299)
Q Consensus 262 ~~~ 264 (299)
..+
T Consensus 342 p~~ 344 (365)
T 4h5i_A 342 PLN 344 (365)
T ss_dssp CTT
T ss_pred CCC
Confidence 653
No 110
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.93 E-value=8.1e-26 Score=188.62 Aligned_cols=250 Identities=10% Similarity=-0.027 Sum_probs=172.7
Q ss_pred CCCCCcchhccCcHHHHHHHhhccCccchhhHHHhhhhHHHHhhhhhHHHHHHhhhcCCCCCCCchhhhhhhhhhhcccc
Q 022324 16 RSSKPRATIESLNGDIICMIFSSLGFFDLVRCSAVCKSWNAIINRCKLLQLLYCKLHGFSNTSGSSMRLHLEELAMKHHR 95 (299)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~i~~~~~h~~~v~~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 95 (299)
..++.+.++++|+.+....+..+. ...|.++.++|+ +++ ...|.++++|.. ......
T Consensus 52 ~sg~~Dg~v~iwd~~~~~~~~~~~--~~~v~~~~~~~~---~~s----------------~s~D~~i~~w~~--~~~~~~ 108 (343)
T 3lrv_A 52 MCRCEDGALHFTQLKDSKTITTIT--TPNPRTGGEHPA---IIS----------------RGPCNRLLLLYP--GNQITI 108 (343)
T ss_dssp EEEEETTEEEEEEESSSSCEEEEE--EECCCTTCCCCS---EEE----------------ECSTTEEEEEET--TTEEEE
T ss_pred EEECCCCcEEEEECCCCcEEEEEe--cCCceeeeeCCc---eEE----------------ecCCCeEEEEEc--cCceEE
Confidence 344567788889887765554443 456778888887 554 336777777732 111000
Q ss_pred ceeecCceeeEEeeccccCeeEEEe-c--CC-EEEEEeCCCcEEEEecCCceeEEEecCC--CceeEEEEecCCCEEE-E
Q 022324 96 FALEEGRIDIDQWKAHSVGVDQCRM-K--RG-LILTGVGDKVMRLWSLEGYKCVEEYSLP--NAASLVDFDFDESKIV-G 168 (299)
Q Consensus 96 ~~l~~g~~~~~~~~~h~~~i~~~~~-~--~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~-~ 168 (299)
..+..+........+|.++|.++.+ + ++ ++++++.||+|++||+.+++++.....+ ..+..++|+|++.+++ +
T Consensus 109 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg 188 (343)
T 3lrv_A 109 LDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALY 188 (343)
T ss_dssp EETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEE
T ss_pred eecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEE
Confidence 0111111111222377789999999 5 55 9999999999999999999987766433 2455699999999999 8
Q ss_pred EcCCeEEEEecCCceee---eec-cCCccceeeeeccCCCeEEEecCCCcEEEEEcCCcceeeeccc---cCCcee--EE
Q 022324 169 LIGTRICIWRRNGLRSV---FPS-REGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRM---HCAPVT--SL 239 (299)
Q Consensus 169 ~~d~~i~v~d~~~~~~~---~~~-~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~---~~~~i~--~~ 239 (299)
+.|+.|++||++++... +.. |.+.+. .++|++++..|++++. +.|++||+++++.+..+.. |...+. ++
T Consensus 189 ~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~-~l~fs~~g~~l~s~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (343)
T 3lrv_A 189 SPDGILDVYNLSSPDQASSRFPVDEEAKIK-EVKFADNGYWMVVECD-QTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTY 266 (343)
T ss_dssp CTTSCEEEEESSCTTSCCEECCCCTTSCEE-EEEECTTSSEEEEEES-SBEEEEETTSSTTCBSSCCCBC-----CCEEE
T ss_pred cCCCEEEEEECCCCCCCccEEeccCCCCEE-EEEEeCCCCEEEEEeC-CeEEEEEcCCCCcceeecccccccccccceEE
Confidence 99999999999987633 444 555444 5689999999999994 5999999999877655543 334444 69
Q ss_pred EeCCC-CeEEEEeC-CCcEEEEeCCCCceEEEeeccCCCCcEEEEEccC---CCCeEEeeec
Q 022324 240 SLSED-QLIISGSS-LGSIAISGLSSDQRVATLRSTDCTGHIICLMYPQ---FLHMLFFLCF 296 (299)
Q Consensus 240 ~~~~~-~~l~~~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~---~g~~l~s~s~ 296 (299)
+|+|+ ++|++++. |+.|++|++.+....... . ++..++|++ +++.+++++.
T Consensus 267 ~~~~~g~~l~~~s~~d~~i~v~~~~~~~~~~~~----~--~~~~~~~~~~~~~~~~l~~~~~ 322 (343)
T 3lrv_A 267 DIDDSGKNMIAYSNESNSLTIYKFDKKTKNWTK----D--EESALCLQSDTADFTDMDVVCG 322 (343)
T ss_dssp EECTTSSEEEEEETTTTEEEEEEECTTTCSEEE----E--EEEECCC----CCCCEEEEEEE
T ss_pred EECCCCCEEEEecCCCCcEEEEEEcccccceEe----c--CceeEecCccccccceeEEEec
Confidence 99999 99999998 999999999765443332 2 677777777 7777776654
No 111
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.93 E-value=2.5e-24 Score=174.95 Aligned_cols=199 Identities=12% Similarity=0.006 Sum_probs=138.2
Q ss_pred hhhhccc----cceeecCceeeEEeeccccCeeEEEecCCEEEEEe---CCCcEEEEec-CCceeEEEecCCCceeE-EE
Q 022324 88 ELAMKHH----RFALEEGRIDIDQWKAHSVGVDQCRMKRGLILTGV---GDKVMRLWSL-EGYKCVEEYSLPNAASL-VD 158 (299)
Q Consensus 88 ~~~~~~~----~~~l~~g~~~~~~~~~h~~~i~~~~~~~~~l~s~~---~dg~i~iwd~-~~~~~~~~~~~~~~~~~-~~ 158 (299)
.+.++|+ ++.++. .+|...|..+ +++.++..+ .|+.|++|++ .+++.+..+..|..... ++
T Consensus 116 sla~spd~~~~~~~l~s--------~g~~~~v~~l--~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~ 185 (356)
T 2w18_A 116 ALFCSSDDESEKQVLLK--------SGNIKAVLGL--TKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILT 185 (356)
T ss_dssp EECC------CCEEEEE--------EEEEEEEEEE--TTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEE
T ss_pred EEEECCCccccccEEEe--------CCCeEEEEec--CCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEE
Confidence 5566666 555544 2344444443 667555554 5999999999 45888888877765554 88
Q ss_pred Eec---CCCEEE-EEcCCeEEEEecCCcee--eeeccCCccce--eeeeccCCCeE------------EEecCCCcEEEE
Q 022324 159 FDF---DESKIV-GLIGTRICIWRRNGLRS--VFPSREGTFMK--GLCMRYFDPEA------------VVGCEDGTARVF 218 (299)
Q Consensus 159 ~~~---~~~~l~-~~~d~~i~v~d~~~~~~--~~~~~~~~~~~--~~~~~~~~~~l------------~s~~~d~~i~iw 218 (299)
|++ ++..|+ ++.|++|++||+.+++. .+..+...... .++++|++..+ ++|+.|++|++|
T Consensus 186 fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklW 265 (356)
T 2w18_A 186 FAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVI 265 (356)
T ss_dssp EEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEE
T ss_pred eeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEE
Confidence 888 778999 89999999999998863 34333222222 23677777654 678899999999
Q ss_pred EcCCcceeeec-----cccCCceeEEEeCCCCeEEEEeCCCcEEEEeCCCCceEEEeeccCCCCcEEEEEccCCCCeEEe
Q 022324 219 DMYSRKCSQII-----RMHCAPVTSLSLSEDQLIISGSSLGSIAISGLSSDQRVATLRSTDCTGHIICLMYPQFLHMLFF 293 (299)
Q Consensus 219 d~~~~~~~~~~-----~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~s 293 (299)
|..+++.+..+ .+|...+.+..++ +.++++++.|++|+|||+.++++++++.+|... .+.+++|+|||++|++
T Consensus 266 d~~tgk~l~v~~~~~p~Gh~~~~lsg~~s-g~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~-vvs~vafSPDG~~LaS 343 (356)
T 2w18_A 266 NPKTTLSVGVMLYCLPPGQAGRFLEGDVK-DHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQ-HWSFVKWSGTDSHLLA 343 (356)
T ss_dssp ETTTTEEEEEEEECCCTTCCCCEEEEEEE-TTEEEEEETTSCEEEEETTTCSEEEEECCC--C-CCCEEEECSSSSEEEE
T ss_pred ECCCCEEEEEEEeeccCCCcceeEccccC-CCEEEEEcCCCcEEEEECCCCcEEEEecCCCCC-eEEEEEECCCCCEEEE
Confidence 99999887654 2555544444433 368999999999999999999999999988762 3446899999999999
Q ss_pred eeccc
Q 022324 294 LCFLP 298 (299)
Q Consensus 294 ~s~~~ 298 (299)
||.-+
T Consensus 344 GS~D~ 348 (356)
T 2w18_A 344 GQKDG 348 (356)
T ss_dssp ECTTS
T ss_pred EECCC
Confidence 98643
No 112
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.93 E-value=7.3e-24 Score=183.21 Aligned_cols=185 Identities=8% Similarity=0.051 Sum_probs=154.4
Q ss_pred eccccCeeEEEe-cCC-EE-EEEeCCCcEEEEecC--CceeEEEec---CCCceeEEEEecCCCEEE-EEcCCeEEEEec
Q 022324 109 KAHSVGVDQCRM-KRG-LI-LTGVGDKVMRLWSLE--GYKCVEEYS---LPNAASLVDFDFDESKIV-GLIGTRICIWRR 179 (299)
Q Consensus 109 ~~h~~~i~~~~~-~~~-~l-~s~~~dg~i~iwd~~--~~~~~~~~~---~~~~~~~~~~~~~~~~l~-~~~d~~i~v~d~ 179 (299)
.+|.+.|.++.| +++ +| ++++.||.|++||+. +++++..+. ....+..++|+|++++|+ ++.++.+++|++
T Consensus 99 ~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~ 178 (450)
T 2vdu_B 99 PPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSIDI 178 (450)
T ss_dssp -CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred CccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEEEec
Confidence 578889999999 666 64 899999999999999 888888775 234556699999999999 999999999999
Q ss_pred CCcee------eeeccCCccceeeeeccC---CCeEEEecCCCcEEEEEcCCcceeee-ccccCCceeEEEeCCC-CeEE
Q 022324 180 NGLRS------VFPSREGTFMKGLCMRYF---DPEAVVGCEDGTARVFDMYSRKCSQI-IRMHCAPVTSLSLSED-QLII 248 (299)
Q Consensus 180 ~~~~~------~~~~~~~~~~~~~~~~~~---~~~l~s~~~d~~i~iwd~~~~~~~~~-~~~~~~~i~~~~~~~~-~~l~ 248 (299)
.+... .+..+.+.+. .++|+++ +..+++++.|+.|++||+++++.+.. +.+|...|.+++|+ + ++|+
T Consensus 179 ~~~~~~~~~~~~~~~h~~~v~-~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~~~l~ 256 (450)
T 2vdu_B 179 NSIPEEKFTQEPILGHVSMLT-DVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCG-KDYLLL 256 (450)
T ss_dssp TSCCCSSCCCCCSEECSSCEE-EEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEEC-STTEEE
T ss_pred CCcccccccceeeecccCceE-EEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEEC-CCCEEE
Confidence 87642 3445555444 4688998 77899999999999999999988877 55899999999999 8 9999
Q ss_pred EEeCCCcEEEEeCCCCceEEEeeccC-----------------------CCCcEEEEEccCCCCeEEeee
Q 022324 249 SGSSLGSIAISGLSSDQRVATLRSTD-----------------------CTGHIICLMYPQFLHMLFFLC 295 (299)
Q Consensus 249 ~~~~dg~i~iwd~~~~~~~~~~~~~~-----------------------~~~~i~~~~~s~~g~~l~s~s 295 (299)
+++.|+.|++||+++++++..+..+. ....|.+++|+|++++|++++
T Consensus 257 s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~ 326 (450)
T 2vdu_B 257 SAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFV 326 (450)
T ss_dssp EEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEE
T ss_pred EEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEE
Confidence 99999999999999999988886321 012799999999999999987
No 113
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.93 E-value=1.4e-24 Score=176.51 Aligned_cols=156 Identities=11% Similarity=0.037 Sum_probs=120.2
Q ss_pred EEeeccccCeeEEEe-c---CC-EEEEEeCCCcEEEEecCCceeEEEecCCC----ceeEEEEecCCCEE----------
Q 022324 106 DQWKAHSVGVDQCRM-K---RG-LILTGVGDKVMRLWSLEGYKCVEEYSLPN----AASLVDFDFDESKI---------- 166 (299)
Q Consensus 106 ~~~~~h~~~i~~~~~-~---~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~----~~~~~~~~~~~~~l---------- 166 (299)
..+.+|...+..++| + ++ +|++|+.|++|+|||+.+++++.++..+. .+..++|+|++..+
T Consensus 172 ~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w 251 (356)
T 2w18_A 172 ENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKE 251 (356)
T ss_dssp EEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------
T ss_pred eeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcc
Confidence 345678888888777 3 33 99999999999999999999999998543 23347899999876
Q ss_pred --E-EEcCCeEEEEecCCceeeee----ccCCccceeeeeccCCCeEEEecCCCcEEEEEcCCcceeeeccccCCcee-E
Q 022324 167 --V-GLIGTRICIWRRNGLRSVFP----SREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVT-S 238 (299)
Q Consensus 167 --~-~~~d~~i~v~d~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~-~ 238 (299)
+ ++.|++|++||..+++.... ...++....++.++.+..+++++.|++|++||+.+++++.++.+|...+. .
T Consensus 252 ~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~ 331 (356)
T 2w18_A 252 SESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVKDHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSF 331 (356)
T ss_dssp ------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEETTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCE
T ss_pred eeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEccccCCCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEE
Confidence 4 67789999999998864311 12233222334455567789999999999999999999999988877655 6
Q ss_pred EEeCCC-CeEEEEeCCCcEEEEeC
Q 022324 239 LSLSED-QLIISGSSLGSIAISGL 261 (299)
Q Consensus 239 ~~~~~~-~~l~~~~~dg~i~iwd~ 261 (299)
++|+|+ ++|++|+.|++|+|||+
T Consensus 332 vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 332 VKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp EEECSSSSEEEEECTTSCEEEEEE
T ss_pred EEECCCCCEEEEEECCCcEEEecC
Confidence 899999 99999999999999996
No 114
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.93 E-value=6.4e-24 Score=182.55 Aligned_cols=189 Identities=14% Similarity=0.198 Sum_probs=155.1
Q ss_pred eEEeeccccCeeEEEe-cC-C-EEEEEeCCCcEEEEecCC----------ceeEEEecCCCceeE-EEEecCCC-EEE-E
Q 022324 105 IDQWKAHSVGVDQCRM-KR-G-LILTGVGDKVMRLWSLEG----------YKCVEEYSLPNAASL-VDFDFDES-KIV-G 168 (299)
Q Consensus 105 ~~~~~~h~~~i~~~~~-~~-~-~l~s~~~dg~i~iwd~~~----------~~~~~~~~~~~~~~~-~~~~~~~~-~l~-~ 168 (299)
......|.+.|+++.| ++ + +|++++.||.|++||+.+ .+.+..+..|...+. ++|+|++. +|+ +
T Consensus 121 ~~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~ 200 (430)
T 2xyi_A 121 IEIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSA 200 (430)
T ss_dssp EEEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEE
T ss_pred EEEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEE
Confidence 4556789999999999 54 3 899999999999999987 567777887765554 99999988 777 8
Q ss_pred EcCCeEEEEecCCce---------eeeeccCCccceeeeecc-CCCeEEEecCCCcEEEEEcCCc---ceeeeccccCCc
Q 022324 169 LIGTRICIWRRNGLR---------SVFPSREGTFMKGLCMRY-FDPEAVVGCEDGTARVFDMYSR---KCSQIIRMHCAP 235 (299)
Q Consensus 169 ~~d~~i~v~d~~~~~---------~~~~~~~~~~~~~~~~~~-~~~~l~s~~~d~~i~iwd~~~~---~~~~~~~~~~~~ 235 (299)
+.||.|++||+.... ..+..+...+. .++|++ .+..+++++.|+.|++||++++ +.+..+..|...
T Consensus 201 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~-~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~ 279 (430)
T 2xyi_A 201 SDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVE-DVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAE 279 (430)
T ss_dssp CTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEE-EEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSC
T ss_pred eCCCeEEEEeCCCCCCCCceeccceeecCCCCCEe-eeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCC
Confidence 999999999998732 22334444433 457888 4556889999999999999987 566777789999
Q ss_pred eeEEEeCCC-C-eEEEEeCCCcEEEEeCCC-CceEEEeeccCCCCcEEEEEccCCCC-eEEeeec
Q 022324 236 VTSLSLSED-Q-LIISGSSLGSIAISGLSS-DQRVATLRSTDCTGHIICLMYPQFLH-MLFFLCF 296 (299)
Q Consensus 236 i~~~~~~~~-~-~l~~~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~i~~~~~s~~g~-~l~s~s~ 296 (299)
|++++|+|+ . ++++|+.||.|++||+++ ++++..+..|.. .|.+++|+|+++ +|++++.
T Consensus 280 v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~--~v~~i~~sp~~~~~l~s~~~ 342 (430)
T 2xyi_A 280 VNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKD--EIFQVQWSPHNETILASSGT 342 (430)
T ss_dssp EEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSS--CEEEEEECSSCTTEEEEEET
T ss_pred eEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCC--CEEEEEECCCCCCEEEEEeC
Confidence 999999998 4 799999999999999998 567888988887 999999999996 5777764
No 115
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.93 E-value=6.8e-24 Score=177.77 Aligned_cols=193 Identities=12% Similarity=0.144 Sum_probs=148.8
Q ss_pred eEEeeccccCeeEEEe-cC---C-EEEEEeCCCcEEEEecCC-ceeE-EEecCCCcee-EEEEecCCCEEE-EEcCCeEE
Q 022324 105 IDQWKAHSVGVDQCRM-KR---G-LILTGVGDKVMRLWSLEG-YKCV-EEYSLPNAAS-LVDFDFDESKIV-GLIGTRIC 175 (299)
Q Consensus 105 ~~~~~~h~~~i~~~~~-~~---~-~l~s~~~dg~i~iwd~~~-~~~~-~~~~~~~~~~-~~~~~~~~~~l~-~~~d~~i~ 175 (299)
+..+++|.+.|++++| ++ + +|++|+.||.|++||+.+ ++.+ ..+..|...+ .++|+|++++|+ ++.|+.|+
T Consensus 32 ~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~ 111 (368)
T 3mmy_A 32 IEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAK 111 (368)
T ss_dssp EECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred eEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEE
Confidence 6677899999999999 55 4 999999999999999997 5554 6676665555 599999999999 99999999
Q ss_pred EEecCCceee-eeccCCccceeeee--ccCCCeEEEecCCCcEEEEEcCCcceeeeccccC-------------------
Q 022324 176 IWRRNGLRSV-FPSREGTFMKGLCM--RYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHC------------------- 233 (299)
Q Consensus 176 v~d~~~~~~~-~~~~~~~~~~~~~~--~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~------------------- 233 (299)
+||+.+.... ...+...+. .++| .+++..+++++.|+.|++||+++++.+..+..+.
T Consensus 112 iwd~~~~~~~~~~~~~~~v~-~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (368)
T 3mmy_A 112 MWDLSSNQAIQIAQHDAPVK-TIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAER 190 (368)
T ss_dssp EEETTTTEEEEEEECSSCEE-EEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEETTEEEEEEGGG
T ss_pred EEEcCCCCceeeccccCceE-EEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEecCCeeEEEeCCC
Confidence 9999987633 334444433 4567 7777789999999999999999887666554322
Q ss_pred ----------------------CceeEEEeCCC-C----eEEEEeCCCcEEEEeCCCC---ceEEEeeccCCC-------
Q 022324 234 ----------------------APVTSLSLSED-Q----LIISGSSLGSIAISGLSSD---QRVATLRSTDCT------- 276 (299)
Q Consensus 234 ----------------------~~i~~~~~~~~-~----~l~~~~~dg~i~iwd~~~~---~~~~~~~~~~~~------- 276 (299)
..+.++.+.++ . .+++++.||.|++||++.. +.+..+..|...
T Consensus 191 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (368)
T 3mmy_A 191 GLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAP 270 (368)
T ss_dssp CEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCC
T ss_pred cEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeeccccccccc
Confidence 22333444333 2 2999999999999999887 556777766531
Q ss_pred ---CcEEEEEccCCCCeEEeeeccc
Q 022324 277 ---GHIICLMYPQFLHMLFFLCFLP 298 (299)
Q Consensus 277 ---~~i~~~~~s~~g~~l~s~s~~~ 298 (299)
.+|++++|+|++++|++|+.-+
T Consensus 271 ~~~~~v~~~~~sp~~~~l~s~~~dg 295 (368)
T 3mmy_A 271 QDIYAVNGIAFHPVHGTLATVGSDG 295 (368)
T ss_dssp EEECCEEEEEECTTTCCEEEEETTS
T ss_pred ccccceEEEEEecCCCEEEEEccCC
Confidence 0499999999999999998643
No 116
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.93 E-value=5.3e-25 Score=190.36 Aligned_cols=225 Identities=10% Similarity=-0.025 Sum_probs=171.1
Q ss_pred cCccchhhHHHhhhhHHHH-hhhhhHHHHHHhhhcCCCCCCCchhhhhhhhhhhccccceeecCceeeEEee--ccccCe
Q 022324 39 LGFFDLVRCSAVCKSWNAI-INRCKLLQLLYCKLHGFSNTSGSSMRLHLEELAMKHHRFALEEGRIDIDQWK--AHSVGV 115 (299)
Q Consensus 39 ~~h~~~v~~~~~~~~~~~l-~~~~~~w~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~--~h~~~i 115 (299)
.+|.+.|.+++|+|+++.| ++ ...|+.+++|.. .. .....++.+. .|...|
T Consensus 99 ~~~~~~v~~~~~s~d~~~l~~~----------------~~~dg~v~iwd~--~~--------~~~~~~~~~~~~~~~~~v 152 (450)
T 2vdu_B 99 PPIYSYIRNLRLTSDESRLIAC----------------ADSDKSLLVFDV--DK--------TSKNVLKLRKRFCFSKRP 152 (450)
T ss_dssp -CCCCCEEEEEECTTSSEEEEE----------------EGGGTEEEEEEE--CS--------SSSSCEEEEEEEECSSCE
T ss_pred CccCCceEEEEEcCCCCEEEEE----------------ECCCCeEEEEEC--cC--------CCCceeeeeecccCCCCc
Confidence 4678889999999999986 55 124566777732 20 0112233333 677899
Q ss_pred eEEEe-cCC-EEEEEeCCCcEEEEecCCceeEE----EecCCCc-eeEEEEecC---CCEEE-EEcCCeEEEEecCCcee
Q 022324 116 DQCRM-KRG-LILTGVGDKVMRLWSLEGYKCVE----EYSLPNA-ASLVDFDFD---ESKIV-GLIGTRICIWRRNGLRS 184 (299)
Q Consensus 116 ~~~~~-~~~-~l~s~~~dg~i~iwd~~~~~~~~----~~~~~~~-~~~~~~~~~---~~~l~-~~~d~~i~v~d~~~~~~ 184 (299)
.++.| +++ +|++|+.||.+++|++.+++... .+..|.. +..++|+|+ +++|+ ++.|+.|++||+.+...
T Consensus 153 ~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~ 232 (450)
T 2vdu_B 153 NAISIAEDDTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFI 232 (450)
T ss_dssp EEEEECTTSSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTC
T ss_pred eEEEEcCCCCEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCce
Confidence 99999 666 99999999999999998877543 5565654 445999999 88888 99999999999987753
Q ss_pred e---eeccCCccceeeeeccCCCeEEEecCCCcEEEEEcCCcceeeeccc-------------------------cCCce
Q 022324 185 V---FPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRM-------------------------HCAPV 236 (299)
Q Consensus 185 ~---~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~-------------------------~~~~i 236 (299)
. ...+.+.+. .++|+ ++..|++++.|+.|++||+++++.+..+.. ....|
T Consensus 233 ~~~~~~~h~~~v~-~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 310 (450)
T 2vdu_B 233 VDKWLFGHKHFVS-SICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAV 310 (450)
T ss_dssp EEEECCCCSSCEE-EEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCE
T ss_pred eeeeecCCCCceE-EEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEE
Confidence 3 234544433 45777 888899999999999999999988777652 23568
Q ss_pred eEEEeCCC-CeEEEEe-CCCcEEEEeC--CCC---ceEEEeeccCCCCcEEEEEccCCCCeEEee
Q 022324 237 TSLSLSED-QLIISGS-SLGSIAISGL--SSD---QRVATLRSTDCTGHIICLMYPQFLHMLFFL 294 (299)
Q Consensus 237 ~~~~~~~~-~~l~~~~-~dg~i~iwd~--~~~---~~~~~~~~~~~~~~i~~~~~s~~g~~l~s~ 294 (299)
.+++|+|+ +++++++ .|+.|++|++ .++ +.+..+..+ . .|.+++|+|++.+++++
T Consensus 311 ~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~-~--~v~~~~~~~~~~~v~~~ 372 (450)
T 2vdu_B 311 SKIIKSKNLPFVAFFVEATKCIIILEMSEKQKGDLALKQIITFP-Y--NVISLSAHNDEFQVTLD 372 (450)
T ss_dssp EEEEECSSSSEEEEEETTCSEEEEEEECSSSTTCEEEEEEEECS-S--CEEEEEEETTEEEEEEC
T ss_pred EEEEEeCCCCEEEEEECCCCeEEEEEeccCCCCceeeccEeccC-C--ceEEEEecCCcEEEEEe
Confidence 99999999 8899888 8999999999 555 677778777 4 89999999965444443
No 117
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.92 E-value=3.9e-24 Score=178.41 Aligned_cols=180 Identities=7% Similarity=-0.036 Sum_probs=137.9
Q ss_pred cCeeEEEecCCEEEEEeCCCcEEEEecC---------CceeEEEec-CC-CceeEEEEec--CCCEEE-EEcCCeEEEEe
Q 022324 113 VGVDQCRMKRGLILTGVGDKVMRLWSLE---------GYKCVEEYS-LP-NAASLVDFDF--DESKIV-GLIGTRICIWR 178 (299)
Q Consensus 113 ~~i~~~~~~~~~l~s~~~dg~i~iwd~~---------~~~~~~~~~-~~-~~~~~~~~~~--~~~~l~-~~~d~~i~v~d 178 (299)
..|.++.+.+. +++++.|++|++|+.. +++.+..+. .| ..+..++++| ++++++ ++.|+.|++||
T Consensus 77 ~~v~~~~~~~~-~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd 155 (343)
T 3lrv_A 77 PNPRTGGEHPA-IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQS 155 (343)
T ss_dssp ECCCTTCCCCS-EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEE
T ss_pred CCceeeeeCCc-eEEecCCCeEEEEEccCceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEE
Confidence 44555555333 9999999999999665 455455554 33 3466699999 999999 99999999999
Q ss_pred cCCceeee--eccCCccceeeeeccCCCeEEEecCCCcEEEEEcCCccee-eeccc-cCCceeEEEeCCC-CeEEEEeCC
Q 022324 179 RNGLRSVF--PSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCS-QIIRM-HCAPVTSLSLSED-QLIISGSSL 253 (299)
Q Consensus 179 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~-~~~~~-~~~~i~~~~~~~~-~~l~~~~~d 253 (299)
++++.... ..+.......++++|++..+++|+.|+.|++||+++++.+ ..+.. |..+|++++|+|+ .+|++++ |
T Consensus 156 ~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~ 234 (343)
T 3lrv_A 156 YEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-D 234 (343)
T ss_dssp SSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-S
T ss_pred CCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-C
Confidence 99876432 2222222345789999999999999999999999999887 77877 9999999999999 8999999 5
Q ss_pred CcEEEEeCCCCceEEEeec---cCCCCcEE--EEEccCCCCeEEeeec
Q 022324 254 GSIAISGLSSDQRVATLRS---TDCTGHII--CLMYPQFLHMLFFLCF 296 (299)
Q Consensus 254 g~i~iwd~~~~~~~~~~~~---~~~~~~i~--~~~~s~~g~~l~s~s~ 296 (299)
+.|++||+++++.+..+.. +.. .+. +++|+|+|++|++++-
T Consensus 235 ~~v~iwd~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~g~~l~~~s~ 280 (343)
T 3lrv_A 235 QTVVCFDLRKDVGTLAYPTYTIPEF--KTGTVTYDIDDSGKNMIAYSN 280 (343)
T ss_dssp SBEEEEETTSSTTCBSSCCCBC-------CCEEEEECTTSSEEEEEET
T ss_pred CeEEEEEcCCCCcceeecccccccc--cccceEEEECCCCCEEEEecC
Confidence 5999999999887665554 222 333 6999999999999663
No 118
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.92 E-value=2e-24 Score=183.04 Aligned_cols=242 Identities=8% Similarity=0.045 Sum_probs=183.6
Q ss_pred CCcchhccCcHHHHHHHhhccCccchhhHHHhhhhHHHH-hhhhhHHHHHHhhhcCCCCCCCchhhhhhhhhhhccccce
Q 022324 19 KPRATIESLNGDIICMIFSSLGFFDLVRCSAVCKSWNAI-INRCKLLQLLYCKLHGFSNTSGSSMRLHLEELAMKHHRFA 97 (299)
Q Consensus 19 ~~~~~~~~~~~~~~~~i~~~~~h~~~v~~~~~~~~~~~l-~~~~~~w~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 97 (299)
..+..+..|+.+....+..+..|. .+.+++|+|+++.+ ++ ...+..+++| ++....
T Consensus 9 ~~d~~v~v~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~----------------~~~d~~i~v~--d~~~~~---- 65 (391)
T 1l0q_A 9 SESDNISVIDVTSNKVTATIPVGS-NPMGAVISPDGTKVYVA----------------NAHSNDVSII--DTATNN---- 65 (391)
T ss_dssp TTTTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEE----------------EGGGTEEEEE--ETTTTE----
T ss_pred CCCCEEEEEECCCCeEEEEeecCC-CcceEEECCCCCEEEEE----------------CCCCCeEEEE--ECCCCe----
Confidence 345678899988776655555554 47899999999876 33 1134555666 322211
Q ss_pred eecCceeeEEeeccccCeeEEEe-cCC-EE-EEEeCCCcEEEEecCCceeEEEecCCCceeEEEEecCCCEE-E-EEcCC
Q 022324 98 LEEGRIDIDQWKAHSVGVDQCRM-KRG-LI-LTGVGDKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKI-V-GLIGT 172 (299)
Q Consensus 98 l~~g~~~~~~~~~h~~~i~~~~~-~~~-~l-~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~-~~~d~ 172 (299)
.+..+..+. .+.++.| +++ +| ++++.++.|++||+.+++.+..+..+..+..++|+|+++.+ + ++.++
T Consensus 66 ------~~~~~~~~~-~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~ 138 (391)
T 1l0q_A 66 ------VIATVPAGS-SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDK 138 (391)
T ss_dssp ------EEEEEECSS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTT
T ss_pred ------EEEEEECCC-CccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCCCCcceEEECCCCCEEEEEeCCCC
Confidence 233334444 8999999 555 55 55667799999999999999999888888789999999987 4 66699
Q ss_pred eEEEEecCCceeeeeccCCccceeeeeccCCCeE-EEecCCCcEEEEEcCCcceeeeccccCCceeEEEeCCC-CeEEEE
Q 022324 173 RICIWRRNGLRSVFPSREGTFMKGLCMRYFDPEA-VVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISG 250 (299)
Q Consensus 173 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~-~~l~~~ 250 (299)
.|++||+.+++.......+.....+++++++..+ ++++.++.|++||+++++.+..+. +...+.+++|+|+ ++++++
T Consensus 139 ~v~~~d~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~-~~~~~~~~~~~~~g~~l~~~ 217 (391)
T 1l0q_A 139 TVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVK-VEAAPSGIAVNPEGTKAYVT 217 (391)
T ss_dssp EEEEEETTTTEEEEEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE-CSSEEEEEEECTTSSEEEEE
T ss_pred EEEEEECCCCcEEEEEecCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEe-cCCCccceEECCCCCEEEEE
Confidence 9999999887643322222223457899999886 678889999999999988877774 5667999999999 888887
Q ss_pred e---CCCcEEEEeCCCCceEEEeeccCCCCcEEEEEccCCCCeEEee
Q 022324 251 S---SLGSIAISGLSSDQRVATLRSTDCTGHIICLMYPQFLHMLFFL 294 (299)
Q Consensus 251 ~---~dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~s~ 294 (299)
+ .++.|++||+++++.+..+..+. .+.+++|+|+|++|+++
T Consensus 218 ~~~~~~~~v~~~d~~~~~~~~~~~~~~---~~~~~~~s~dg~~l~~s 261 (391)
T 1l0q_A 218 NVDKYFNTVSMIDTGTNKITARIPVGP---DPAGIAVTPDGKKVYVA 261 (391)
T ss_dssp EECSSCCEEEEEETTTTEEEEEEECCS---SEEEEEECTTSSEEEEE
T ss_pred ecCcCCCcEEEEECCCCeEEEEEecCC---CccEEEEccCCCEEEEE
Confidence 7 68999999999999998888765 68999999999988544
No 119
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.92 E-value=2.1e-24 Score=185.42 Aligned_cols=244 Identities=9% Similarity=0.030 Sum_probs=187.7
Q ss_pred CcchhccCcHHHHHHHh-----hccCccchhhHHHhhhhHHHHhhhhhHHHHHHhhhcCCCCCCCchhhhhhhhhhhccc
Q 022324 20 PRATIESLNGDIICMIF-----SSLGFFDLVRCSAVCKSWNAIINRCKLLQLLYCKLHGFSNTSGSSMRLHLEELAMKHH 94 (299)
Q Consensus 20 ~~~~~~~~~~~~~~~i~-----~~~~h~~~v~~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 94 (299)
.+..+..|+.+....+. .+.+|.+.|.+++++++++.+++ ...+..+++| ++..
T Consensus 142 ~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s----------------~~~d~~v~~~--d~~~--- 200 (433)
T 3bws_A 142 EDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVS----------------QMQANAVHVF--DLKT--- 200 (433)
T ss_dssp TSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEE----------------EGGGTEEEEE--ETTT---
T ss_pred CCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEE----------------ECCCCEEEEE--ECCC---
Confidence 34568888887665443 44578889999999999888876 1134555666 3221
Q ss_pred cceeecCceeeEEeeccccCeeEEEe-cCC-EE-EEEeCCCcEEEEecCCceeEEEecCCCceeEEEEecCCCEEE-EE-
Q 022324 95 RFALEEGRIDIDQWKAHSVGVDQCRM-KRG-LI-LTGVGDKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIV-GL- 169 (299)
Q Consensus 95 ~~~l~~g~~~~~~~~~h~~~i~~~~~-~~~-~l-~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~- 169 (299)
...+..+..|...+.++.| +++ ++ ++++.|+.|++||+.+++.+..+..+..+..++|+|+++.++ ++
T Consensus 201 -------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~ 273 (433)
T 3bws_A 201 -------LAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKIGLPRGLLLSKDGKELYIAQF 273 (433)
T ss_dssp -------CCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCCSEEEEEEECTTSSEEEEEEE
T ss_pred -------ceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCCCCceEEEEcCCCCEEEEEEC
Confidence 2234455788999999999 555 55 566689999999999999999888877777799999999888 55
Q ss_pred -------cCCeEEEEecCCceeeeec-cCCccceeeeeccCCCe-EEEecCCCcEEEEEcCCcceeeeccccCCceeEEE
Q 022324 170 -------IGTRICIWRRNGLRSVFPS-REGTFMKGLCMRYFDPE-AVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLS 240 (299)
Q Consensus 170 -------~d~~i~v~d~~~~~~~~~~-~~~~~~~~~~~~~~~~~-l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~~~ 240 (299)
.|+.|++||+.+++..... +.. ....++++++++. +++++.++.|++||+.+++.+..+. +...+.+++
T Consensus 274 ~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~-~~~~~~~~~ 351 (433)
T 3bws_A 274 SASNQESGGGRLGIYSMDKEKLIDTIGPPG-NKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIP-VFDKPNTIA 351 (433)
T ss_dssp ESCTTCSCCEEEEEEETTTTEEEEEEEEEE-CEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEE-CSSSEEEEE
T ss_pred CCCccccCCCeEEEEECCCCcEEeeccCCC-CcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEec-CCCCCCeEE
Confidence 4889999999887533222 222 2234688898876 5667899999999999988887774 677799999
Q ss_pred eCCC-CeEEEEeC---------------CCcEEEEeCCCCceEEEeeccCCCCcEEEEEccCCCCeEEeeec
Q 022324 241 LSED-QLIISGSS---------------LGSIAISGLSSDQRVATLRSTDCTGHIICLMYPQFLHMLFFLCF 296 (299)
Q Consensus 241 ~~~~-~~l~~~~~---------------dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~s~s~ 296 (299)
|+|+ +++++++. ||.|++||+.+++.+..+..+. .+.+++|+|+|++|++++.
T Consensus 352 ~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~~~---~~~~~~~s~dg~~l~~~~~ 420 (433)
T 3bws_A 352 LSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEAGN---QPTGLDVSPDNRYLVISDF 420 (433)
T ss_dssp ECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEECSS---SEEEEEECTTSCEEEEEET
T ss_pred EcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecCCC---CCceEEEcCCCCEEEEEEC
Confidence 9999 88888776 5799999999999998887743 7999999999999987753
No 120
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.92 E-value=7.6e-23 Score=175.29 Aligned_cols=183 Identities=13% Similarity=0.157 Sum_probs=151.4
Q ss_pred eeccccCeeEEEe-cCC-EEEEEeCCCcEEEEecCCceeEEEecCCCceeEEEEecCCCEEE-EEcCCeEEEEecCCce-
Q 022324 108 WKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIV-GLIGTRICIWRRNGLR- 183 (299)
Q Consensus 108 ~~~h~~~i~~~~~-~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~d~~i~v~d~~~~~- 183 (299)
+.+|...|++++| +++ +|++|+.||+|++||+.+++++..+..|...+. ++++++..++ ++.|+.+++||.....
T Consensus 143 ~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~-~~s~~~~~l~sgs~d~~i~~~d~~~~~~ 221 (420)
T 4gga_A 143 MEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVG-SLSWNSYILSSGSRSGHIHHHDVRVAEH 221 (420)
T ss_dssp CCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEE-EEEEETTEEEEEETTSEEEEEETTSSSC
T ss_pred ecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceE-EEeeCCCEEEEEeCCCceeEeeecccce
Confidence 3578889999999 666 999999999999999999999999998865544 3445677888 9999999999998764
Q ss_pred --eeeeccCCccceeeeeccCCCeEEEecCCCcEEEEEcCCcce----eeeccccCCceeEEEeCCC--CeEEE--EeCC
Q 022324 184 --SVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKC----SQIIRMHCAPVTSLSLSED--QLIIS--GSSL 253 (299)
Q Consensus 184 --~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~----~~~~~~~~~~i~~~~~~~~--~~l~~--~~~d 253 (299)
..+..+..... ...+.+.+..+++++.|+.+++||..+++. +.....|...|.+++|+|+ .++++ |+.|
T Consensus 222 ~~~~~~~h~~~~~-~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D 300 (420)
T 4gga_A 222 HVATLSGHSQEVC-GLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSD 300 (420)
T ss_dssp EEEEEECCSSCEE-EEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTT
T ss_pred eeEEeccccccee-eeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCC
Confidence 33445554443 468889999999999999999999987653 4455678899999999997 56665 4579
Q ss_pred CcEEEEeCCCCceEEEeeccCCCCcEEEEEccCCCCeEEeee
Q 022324 254 GSIAISGLSSDQRVATLRSTDCTGHIICLMYPQFLHMLFFLC 295 (299)
Q Consensus 254 g~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~s~s 295 (299)
++|++||+++++++..+..+. .+.++.|+|+++.+++++
T Consensus 301 ~~I~iwd~~t~~~~~~~~~~~---~v~~~~~~~~~~~lv~~s 339 (420)
T 4gga_A 301 RHIRIWNVCSGACLSAVDAHS---QVCSILWSPHYKELISGH 339 (420)
T ss_dssp CEEEEEETTTTEEEEEEECSS---CEEEEEEETTTTEEEEEE
T ss_pred CEEEEEeCCccccceeecccc---ceeeeeecCCCCeEEEEE
Confidence 999999999999999988766 799999999999998875
No 121
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.91 E-value=2.3e-24 Score=185.95 Aligned_cols=202 Identities=12% Similarity=0.050 Sum_probs=155.9
Q ss_pred hhhhhhhhhhccccceeecCceeeE--------EeeccccCeeEEEe-cCCEEEEEeCCCcEEEEecCCceeEEEecCCC
Q 022324 82 MRLHLEELAMKHHRFALEEGRIDID--------QWKAHSVGVDQCRM-KRGLILTGVGDKVMRLWSLEGYKCVEEYSLPN 152 (299)
Q Consensus 82 ~~~~~~~~~~~~~~~~l~~g~~~~~--------~~~~h~~~i~~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~ 152 (299)
...|+.++.++|+++.++++..+.. .+++|...|+++.| |++ .++.+.+|+.+.. ....+....
T Consensus 14 ~~~~v~sv~~SpDG~~iASas~D~TV~d~~~~~~l~gh~~~v~~V~FsPdg------~~~~~~~~~~~~~-~~~~~~~~~ 86 (588)
T 2j04_A 14 FEDWKNNLTWARDGTLYLTTFPDISIGQPKYAKDINCNSKNLFHVKEFPLE------FENKLDFELAQQN-GLLNSQPVC 86 (588)
T ss_dssp CSSSSCCEEECTTSCEEEECSSSEEEEEECCCSCCSSBGGGTEEEEEECCC------CCCTTTTSCCCSS-CSSTTSCSC
T ss_pred hhccEEEEEECCCCCEEEEEcCCceeecccccceecCCCccEEEEEECCCC------CcceEEEEeCCCc-eEeecCCCC
Confidence 4567889999999999999887733 34799999999988 665 5566555554322 222333445
Q ss_pred ceeEEEEecCCCEEE-EEcCCeEEEEecCCceeeeeccCCc----cceeeeeccCCCeEEEecCCCcEEEEEcCCcce--
Q 022324 153 AASLVDFDFDESKIV-GLIGTRICIWRRNGLRSVFPSREGT----FMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKC-- 225 (299)
Q Consensus 153 ~~~~~~~~~~~~~l~-~~~d~~i~v~d~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~-- 225 (299)
.+..++|+|+|+.|+ ++.||.|++||..+....+. +... ....++|+|+++.|++|+.||+|++||+.++..
T Consensus 87 ~V~~vawSPdG~~LAs~s~dg~V~iwd~~~~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~ 165 (588)
T 2j04_A 87 YPRVCKPSPIDDWMAVLSNNGNVSVFKDNKMLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENT 165 (588)
T ss_dssp CEEEEEECSSSSCEEEEETTSCEEEEETTEEEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTC
T ss_pred cEEEEEECCCCCEEEEEeCCCcEEEEeCCceeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCcccc
Confidence 566799999999999 99999999999655333333 3322 234679999999999999999999999998753
Q ss_pred -----eeec----cccCCceeEEEeCCCCeEEEEeCCCcEEEEeCCCCce---EEEee-ccCCCCcEEEEEccCCCCeEE
Q 022324 226 -----SQII----RMHCAPVTSLSLSEDQLIISGSSLGSIAISGLSSDQR---VATLR-STDCTGHIICLMYPQFLHMLF 292 (299)
Q Consensus 226 -----~~~~----~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~---~~~~~-~~~~~~~i~~~~~s~~g~~l~ 292 (299)
+..+ .+|...|.+++|+|+. +++++.|++|++||+..++. .+++. +|.. .|.+++|+ |+.||
T Consensus 166 ~~~i~l~ti~~~~~gh~~~V~sVawSPdg-Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~--~V~svaFs--g~~LA 240 (588)
T 2j04_A 166 PEFYFESSIRLSDAGSKDWVTHIVWYEDV-LVAALSNNSVFSMTVSASSHQPVSRMIQNASRR--KITDLKIV--DYKVV 240 (588)
T ss_dssp CCCEEEEEEECSCTTCCCCEEEEEEETTE-EEEEETTCCEEEECCCSSSSCCCEEEEECCCSS--CCCCEEEE--TTEEE
T ss_pred ccceeeeeeecccccccccEEEEEEcCCc-EEEEeCCCeEEEEECCCCccccceeeecccccC--cEEEEEEE--CCEEE
Confidence 4565 5677899999999999 99999999999999988773 35664 5655 89999999 68898
Q ss_pred eeec
Q 022324 293 FLCF 296 (299)
Q Consensus 293 s~s~ 296 (299)
+++.
T Consensus 241 Sa~~ 244 (588)
T 2j04_A 241 LTCP 244 (588)
T ss_dssp EECS
T ss_pred EEeC
Confidence 8873
No 122
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.91 E-value=2.6e-24 Score=177.03 Aligned_cols=225 Identities=12% Similarity=0.084 Sum_probs=166.1
Q ss_pred CCCCCCCCCcchhccCcHHHHHHHhhccCccchhhHHHhhhhHHHHhhhhhHHHHHHhhhcCCCCCCCchhhhhhhhhhh
Q 022324 12 PPKKRSSKPRATIESLNGDIICMIFSSLGFFDLVRCSAVCKSWNAIINRCKLLQLLYCKLHGFSNTSGSSMRLHLEELAM 91 (299)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~h~~~v~~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~d~~~~~~~~~~~~ 91 (299)
.+....+..+.++++|+.+..+.+..+.+|...+.++. +++..+++ ...+...+.|..
T Consensus 79 ~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~--~~~~~l~s----------------~~~~~~~~~~~~---- 136 (318)
T 4ggc_A 79 GNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLS--WNSYILSS----------------GSRSGHIHHHDV---- 136 (318)
T ss_dssp SSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEE--EETTEEEE----------------EETTSEEEEEET----
T ss_pred CCEEEEEECCCcEEEeecCCceeEEEecCccceEEEee--cCCCEEEE----------------EecCCceEeeec----
Confidence 34445666788999999999888888889988776543 44445554 113333344422
Q ss_pred ccccceeecCceeeEEeeccccCeeEEEe-cCC-EEEEEeCCCcEEEEecCCceeE----EEecCC-CceeEEEEecCCC
Q 022324 92 KHHRFALEEGRIDIDQWKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYKCV----EEYSLP-NAASLVDFDFDES 164 (299)
Q Consensus 92 ~~~~~~l~~g~~~~~~~~~h~~~i~~~~~-~~~-~l~s~~~dg~i~iwd~~~~~~~----~~~~~~-~~~~~~~~~~~~~ 164 (299)
..+...+..+.+|...+..+.+ +++ +|++++.||.|++||+.+++.. .....+ ..+..+.+.+++.
T Consensus 137 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 209 (318)
T 4ggc_A 137 -------RVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQS 209 (318)
T ss_dssp -------TSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTST
T ss_pred -------CCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCC
Confidence 2233446677899999999988 555 9999999999999999876532 233333 3445588888776
Q ss_pred EEE----EEcCCeEEEEecCCceeeeeccCCccceeeeeccCCCeEEE--ecCCCcEEEEEcCCcceeeeccccCCceeE
Q 022324 165 KIV----GLIGTRICIWRRNGLRSVFPSREGTFMKGLCMRYFDPEAVV--GCEDGTARVFDMYSRKCSQIIRMHCAPVTS 238 (299)
Q Consensus 165 ~l~----~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s--~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~ 238 (299)
.++ ++.++.|++||...................++.+.+..+++ |+.|+.|++||+++++.+..+.+|.+.|++
T Consensus 210 ~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~ 289 (318)
T 4ggc_A 210 NVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLS 289 (318)
T ss_dssp TEEEEEECTTTCEEEEEETTTCCEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEE
T ss_pred cEEEEEecCCCCEEEEEecccccccccccceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEE
Confidence 433 45678999999988764433333333335678888888655 457999999999999999999999999999
Q ss_pred EEeCCC-CeEEEEeCCCcEEEEeCCCCc
Q 022324 239 LSLSED-QLIISGSSLGSIAISGLSSDQ 265 (299)
Q Consensus 239 ~~~~~~-~~l~~~~~dg~i~iwd~~~~~ 265 (299)
++|+|+ ++|++|+.||+|+|||+.+.+
T Consensus 290 l~~spdg~~l~S~s~D~~v~iWd~~~~d 317 (318)
T 4ggc_A 290 LTMSPDGATVASAAADETLRLWRCFELD 317 (318)
T ss_dssp EEECTTSSCEEEEETTTEEEEECCSCCC
T ss_pred EEEcCCCCEEEEEecCCeEEEEECCCCC
Confidence 999999 999999999999999997653
No 123
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.90 E-value=2.3e-21 Score=164.21 Aligned_cols=186 Identities=8% Similarity=0.054 Sum_probs=150.2
Q ss_pred eEEeeccccCeeEEEe-cCC-EE-EEEeCCCcEEEEecCCceeEEEecCCCceeEEEEecCCCEEE-EE-cCCeEEEEec
Q 022324 105 IDQWKAHSVGVDQCRM-KRG-LI-LTGVGDKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIV-GL-IGTRICIWRR 179 (299)
Q Consensus 105 ~~~~~~h~~~i~~~~~-~~~-~l-~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~-~d~~i~v~d~ 179 (299)
+..+..|. .+.++.| +++ ++ ++++.|+.|++||+.+++.+..+..+..+..++|+|+++.++ ++ .++.|++||+
T Consensus 25 ~~~~~~~~-~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~v~v~d~ 103 (391)
T 1l0q_A 25 TATIPVGS-NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSSPQGVAVSPDGKQVYVTNMASSTLSVIDT 103 (391)
T ss_dssp EEEEECSS-SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEEET
T ss_pred EEEeecCC-CcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCCCccceEECCCCCEEEEEECCCCEEEEEEC
Confidence 34455564 5889999 666 54 777899999999999999999999888777899999999876 44 5699999999
Q ss_pred CCceeeeeccCCccceeeeeccCCCeE-EEecCCCcEEEEEcCCcceeeeccccCCceeEEEeCCC-CeE-EEEeCCCcE
Q 022324 180 NGLRSVFPSREGTFMKGLCMRYFDPEA-VVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLI-ISGSSLGSI 256 (299)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~l-~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~-~~l-~~~~~dg~i 256 (299)
.+++.............++++++++.+ ++++.++.|++||+.+++.+..+..+ ..+.+++|+|+ +.+ ++++.++.|
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~~~dg~~l~~~~~~~~~v 182 (391)
T 1l0q_A 104 TSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVG-RSPKGIAVTPDGTKVYVANFDSMSI 182 (391)
T ss_dssp TTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECC-SSEEEEEECTTSSEEEEEETTTTEE
T ss_pred CCCeEEEEEeCCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecC-CCcceEEECCCCCEEEEEeCCCCEE
Confidence 987643322222233457899999886 78888999999999999988887654 45799999999 666 677889999
Q ss_pred EEEeCCCCceEEEeeccCCCCcEEEEEccCCCCeEEeee
Q 022324 257 AISGLSSDQRVATLRSTDCTGHIICLMYPQFLHMLFFLC 295 (299)
Q Consensus 257 ~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~s~s 295 (299)
++||+++++.+..+..+. .+.+++|+|+|++|++++
T Consensus 183 ~~~d~~~~~~~~~~~~~~---~~~~~~~~~~g~~l~~~~ 218 (391)
T 1l0q_A 183 SVIDTVTNSVIDTVKVEA---APSGIAVNPEGTKAYVTN 218 (391)
T ss_dssp EEEETTTTEEEEEEECSS---EEEEEEECTTSSEEEEEE
T ss_pred EEEECCCCeEEEEEecCC---CccceEECCCCCEEEEEe
Confidence 999999998888876543 799999999999999886
No 124
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.89 E-value=3.8e-22 Score=171.27 Aligned_cols=185 Identities=11% Similarity=0.117 Sum_probs=150.6
Q ss_pred eeccccCeeEEEe-cCC-EEEEEeCCCcEEEEecCCceeEEEecCCCc-eeEEEEecCCCEEE-EE-cCCeEEEEecCCc
Q 022324 108 WKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNA-ASLVDFDFDESKIV-GL-IGTRICIWRRNGL 182 (299)
Q Consensus 108 ~~~h~~~i~~~~~-~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~-~~-~d~~i~v~d~~~~ 182 (299)
+.+|.+.|.++.| +++ ++++++.|+.|++||+.+++.+..+..+.. +..++|+|+++.++ ++ .++.|++||++++
T Consensus 165 ~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~ 244 (433)
T 3bws_A 165 YKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTK 244 (433)
T ss_dssp HHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTT
T ss_pred ccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCC
Confidence 3689999999999 555 899999999999999999999988886654 44599999999886 44 6899999999887
Q ss_pred eeeeeccCCccceeeeeccCCCeEEEec--------CCCcEEEEEcCCcceeeeccccCCceeEEEeCCC-C-eEEEEeC
Q 022324 183 RSVFPSREGTFMKGLCMRYFDPEAVVGC--------EDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-Q-LIISGSS 252 (299)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~l~s~~--------~d~~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~-~-~l~~~~~ 252 (299)
+.............+++++++..+++++ .|+.|++||+++++.+..+ .+...+.+++|+|+ + ++++++.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~-~~~~~~~~~~~~~~g~~l~~~~~~ 323 (433)
T 3bws_A 245 LEIRKTDKIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTI-GPPGNKRHIVSGNTENKIYVSDMC 323 (433)
T ss_dssp EEEEECCCCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEE-EEEECEEEEEECSSTTEEEEEETT
T ss_pred cEEEEecCCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeec-cCCCCcceEEECCCCCEEEEEecC
Confidence 6443332233344578899999988877 5889999999998877766 55667899999998 5 5567789
Q ss_pred CCcEEEEeCCCCceEEEeeccCCCCcEEEEEccCCCCeEEeeec
Q 022324 253 LGSIAISGLSSDQRVATLRSTDCTGHIICLMYPQFLHMLFFLCF 296 (299)
Q Consensus 253 dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~s~s~ 296 (299)
|+.|++||+.+++.+..+.. .. .+.+++|+|+|++|++++.
T Consensus 324 ~~~v~v~d~~~~~~~~~~~~-~~--~~~~~~~s~dg~~l~~~~~ 364 (433)
T 3bws_A 324 CSKIEVYDLKEKKVQKSIPV-FD--KPNTIALSPDGKYLYVSCR 364 (433)
T ss_dssp TTEEEEEETTTTEEEEEEEC-SS--SEEEEEECTTSSEEEEEEC
T ss_pred CCEEEEEECCCCcEEEEecC-CC--CCCeEEEcCCCCEEEEEec
Confidence 99999999999998888863 33 7999999999999888764
No 125
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.89 E-value=2.2e-21 Score=162.57 Aligned_cols=240 Identities=13% Similarity=0.089 Sum_probs=164.3
Q ss_pred cchhccCcHHHHHHHhhccCccchhhHHHhhhhHHHHhhhhhHHHHHHhhhcCCCCCCCchhhhhhhhhhhccccceeec
Q 022324 21 RATIESLNGDIICMIFSSLGFFDLVRCSAVCKSWNAIINRCKLLQLLYCKLHGFSNTSGSSMRLHLEELAMKHHRFALEE 100 (299)
Q Consensus 21 ~~~~~~~~~~~~~~i~~~~~h~~~v~~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~ 100 (299)
.+.+++|+.+....+.... ...+..+++.++.+.++. ....+..+++|.. ....
T Consensus 39 ~~~~~iw~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~---------------~~~~d~~v~iWd~--~~~~------- 92 (355)
T 3vu4_A 39 LKSFEIYNVHPVAHIMSQE--MRHLSKVRMLHRTNYVAF---------------VTGVKEVVHIWDD--VKKQ------- 92 (355)
T ss_dssp SSEEEEEEETTEEEEEEEE--CSCCCEEEECTTSSEEEE---------------ECSSTTEEEEEET--TTTE-------
T ss_pred CCEEEEEecCCcceeeeee--cCCeEEEEEcCCCCEEEE---------------EECCccEEEEEEC--CCCc-------
Confidence 3456778766544332221 123555556666555532 0124567778832 2221
Q ss_pred CceeeEEeeccccCeeEEEecCCEEEEEeCCCcEEEEecCCc-eeEEEecCCCceeEEEEecCCCEEE-E--EcCCeEEE
Q 022324 101 GRIDIDQWKAHSVGVDQCRMKRGLILTGVGDKVMRLWSLEGY-KCVEEYSLPNAASLVDFDFDESKIV-G--LIGTRICI 176 (299)
Q Consensus 101 g~~~~~~~~~h~~~i~~~~~~~~~l~s~~~dg~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~-~--~~d~~i~v 176 (299)
.+..+. |..+|.++.+..+.++.+ .|+.|++||+.++ +.+..+.. ....+++++ ..++ + +.+|.|++
T Consensus 93 ---~~~~~~-~~~~v~~v~~~~~~~~~~-~~~~i~i~d~~~~~~~~~~~~~--~~~~~~~s~--~~la~~sg~~~g~v~i 163 (355)
T 3vu4_A 93 ---DVSRIK-VDAPVKDLFLSREFIVVS-YGDVISVFKFGNPWKRITDDIR--FGGVCEFSN--GLLVYSNEFNLGQIHI 163 (355)
T ss_dssp ---EEEEEE-CSSCEEEEEECSSEEEEE-ETTEEEEEESSTTCCBSSCCEE--EEEEEEEET--TEEEEEESSCTTCEEE
T ss_pred ---EEEEEE-CCCceEEEEEcCCEEEEE-EcCEEEEEECCCCceeeEEecc--CCceEEEEc--cEEEEeCCCcCcEEEE
Confidence 223333 677999999966655544 3789999999988 66655554 233367777 5555 3 67899999
Q ss_pred EecCCce------------------eeeeccCCccceeeeeccCCCeEEEecCCCc-EEEEEcCCcceeeecc-c-cCCc
Q 022324 177 WRRNGLR------------------SVFPSREGTFMKGLCMRYFDPEAVVGCEDGT-ARVFDMYSRKCSQIIR-M-HCAP 235 (299)
Q Consensus 177 ~d~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~-i~iwd~~~~~~~~~~~-~-~~~~ 235 (299)
||+.+.. ..+..|.+.+. .+++++++..|++|+.|++ |++||+++++.+..+. + |...
T Consensus 164 wd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~-~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~ 242 (355)
T 3vu4_A 164 TKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIK-MVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDRAD 242 (355)
T ss_dssp EECCC------------------CCEEECCCSSCEE-EEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCCSC
T ss_pred EECCCCCccccccccccccccCcccEEEEccCCceE-EEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCCCc
Confidence 9998743 34556666554 5689999999999999998 9999999999999997 4 9999
Q ss_pred eeEEEeCCC-CeEEEEeCCCcEEEEeCCCCce--EEEeec------------------cC-CCCcEEEEEccCCCCeEEe
Q 022324 236 VTSLSLSED-QLIISGSSLGSIAISGLSSDQR--VATLRS------------------TD-CTGHIICLMYPQFLHMLFF 293 (299)
Q Consensus 236 i~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~--~~~~~~------------------~~-~~~~i~~~~~s~~g~~l~s 293 (299)
|.+++|+|+ ++|++++.|++|++||++++.. ...+.. .. ...+...++|+++|++|++
T Consensus 243 v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~ 322 (355)
T 3vu4_A 243 VVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSLVVV 322 (355)
T ss_dssp EEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEEEEE
T ss_pred EEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEEeCCCCEEEE
Confidence 999999999 9999999999999999976531 111100 00 0013477899999999999
Q ss_pred eec
Q 022324 294 LCF 296 (299)
Q Consensus 294 ~s~ 296 (299)
++.
T Consensus 323 ~~~ 325 (355)
T 3vu4_A 323 WPH 325 (355)
T ss_dssp ETT
T ss_pred EeC
Confidence 864
No 126
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.87 E-value=4.9e-23 Score=174.99 Aligned_cols=217 Identities=12% Similarity=0.075 Sum_probs=151.2
Q ss_pred CCCCCcchhccCcHHHHHH-----HhhccCccchhhHHHhhh--------hHHHHhhhhhHHHHHHhhhcCCCCCCCchh
Q 022324 16 RSSKPRATIESLNGDIICM-----IFSSLGFFDLVRCSAVCK--------SWNAIINRCKLLQLLYCKLHGFSNTSGSSM 82 (299)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~-----i~~~~~h~~~v~~~~~~~--------~~~~l~~~~~~w~~~~~~~~~~~~~~d~~~ 82 (299)
+.+..+.++++|+.+.... +..+.+|.+.|++++|+| ++++||+ ...|+++
T Consensus 105 as~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las----------------~s~D~tv 168 (393)
T 4gq1_A 105 ACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIAS----------------VGDDCTL 168 (393)
T ss_dssp EEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEE----------------EETTSEE
T ss_pred EEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEE----------------EECCCeE
Confidence 4445688999999876542 234668999999999998 7788887 4478999
Q ss_pred hhhhhhhhhccccceeecCceeeEEeeccccCeeEEEe-cCC--EEEEEeCCCcEEEEecCCceeEEEec----------
Q 022324 83 RLHLEELAMKHHRFALEEGRIDIDQWKAHSVGVDQCRM-KRG--LILTGVGDKVMRLWSLEGYKCVEEYS---------- 149 (299)
Q Consensus 83 ~~~~~~~~~~~~~~~l~~g~~~~~~~~~h~~~i~~~~~-~~~--~l~s~~~dg~i~iwd~~~~~~~~~~~---------- 149 (299)
|+| ++.. ...+..+.+|.++|.+++| |++ +|++|+.||+|++||+.+++......
T Consensus 169 ~~W--d~~~----------~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~ 236 (393)
T 4gq1_A 169 IIW--RLTD----------EGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWL 236 (393)
T ss_dssp EEE--EEET----------TEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCS
T ss_pred EEE--ECCC----------CceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceE
Confidence 999 3221 2233445689999999999 554 79999999999999998876543321
Q ss_pred ---------------CC-CceeEEEEe-cCCCEEE-EEcCCeEEEEecCCcee--eeeccCCc-----------------
Q 022324 150 ---------------LP-NAASLVDFD-FDESKIV-GLIGTRICIWRRNGLRS--VFPSREGT----------------- 192 (299)
Q Consensus 150 ---------------~~-~~~~~~~~~-~~~~~l~-~~~d~~i~v~d~~~~~~--~~~~~~~~----------------- 192 (299)
.+ ..+..+.|. ++++.++ ++.|+.+++||+..... .+..+...
T Consensus 237 ~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 316 (393)
T 4gq1_A 237 LTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFP 316 (393)
T ss_dssp EEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSC
T ss_pred EecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccC
Confidence 22 233457776 7899998 99999999999876431 11111100
Q ss_pred cceeeeeccC-CC-eEEEecCCCcEEEEEcCCcceeeeccccCCceeEEEeCCC-CeEEEEeCCCcEEEEeC
Q 022324 193 FMKGLCMRYF-DP-EAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGSSLGSIAISGL 261 (299)
Q Consensus 193 ~~~~~~~~~~-~~-~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~-~~l~~~~~dg~i~iwd~ 261 (299)
.....++.+. +. .+++|+.||.|++||+.+++.......|..+|.+++|+|+ ++||+++.+| +.+|.+
T Consensus 317 ~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~~~~~V~svafspdG~~LA~as~~G-v~lvrL 387 (393)
T 4gq1_A 317 SLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIATEGS-VLLTRL 387 (393)
T ss_dssp CSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCEEEEECSSCEEEEEECTTSSEEEEEESSE-EEEEEE
T ss_pred cceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEEEecCCCCcEEEEEEcCCCCEEEEEeCCC-eEEEEE
Confidence 0001122222 23 3678899999999999999988888889999999999999 9999998776 666654
No 127
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.87 E-value=7.1e-21 Score=162.74 Aligned_cols=250 Identities=11% Similarity=-0.016 Sum_probs=172.4
Q ss_pred cchhccCcH--HHHHHHh--hccCccchhhHHHhhhhHHHHhhhhhHHHHHHhhhc---CCC-----CCCC---chhhhh
Q 022324 21 RATIESLNG--DIICMIF--SSLGFFDLVRCSAVCKSWNAIINRCKLLQLLYCKLH---GFS-----NTSG---SSMRLH 85 (299)
Q Consensus 21 ~~~~~~~~~--~~~~~i~--~~~~h~~~v~~~~~~~~~~~l~~~~~~w~~~~~~~~---~~~-----~~~d---~~~~~~ 85 (299)
...+++|+. ...+++. .+.+|...++.+++.+....... ...... ..+ ...+ ..+++|
T Consensus 92 ~~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-------~~g~~~~~~~~l~~~s~~~~~~~~~~i~i~ 164 (415)
T 2hqs_A 92 NVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEK-------LTGIKGAFRTRIAYVVQTNGGQFPYELRVS 164 (415)
T ss_dssp EEEEEEEECSSSTTCEEEEEEEEECGGGHHHHHHHHHHHHHHH-------HHSSCCCTTCEEEEEEECSSSSCCEEEEEE
T ss_pred EEEEEEEeCCCCCCCEEeeeEEEcChhHHHHHHHHHHHHHHHH-------HcCCCCcCCCEEEEEEecCCCCccceEEEE
Confidence 347899999 7777663 47789999998887664332221 000000 000 0011 333333
Q ss_pred hhhhhhccccceeecCceeeEEeeccccCeeEEEe-cCC-EEEEEeCCC---cEEEEecCCceeEEEecCCCceeEEEEe
Q 022324 86 LEELAMKHHRFALEEGRIDIDQWKAHSVGVDQCRM-KRG-LILTGVGDK---VMRLWSLEGYKCVEEYSLPNAASLVDFD 160 (299)
Q Consensus 86 ~~~~~~~~~~~~l~~g~~~~~~~~~h~~~i~~~~~-~~~-~l~s~~~dg---~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 160 (299)
++ .....+.+.+|...|.++.| |++ +|++++.++ .|++||+.+++..........+..++|+
T Consensus 165 --d~-----------~g~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~~~~~~~~~~~s 231 (415)
T 2hqs_A 165 --DY-----------DGYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPRHNGAPAFS 231 (415)
T ss_dssp --ET-----------TSCSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEECCSSCEEEEEEC
T ss_pred --cC-----------CCCCCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEeecCCCcccCEEEc
Confidence 21 12234566789999999999 676 899999885 9999999999876544444455569999
Q ss_pred cCCCEEE-E-EcCC--eEEEEecCCcee-eeeccCCccceeeeeccCCCeEEEecC-CC--cEEEEEcCCcceeeecccc
Q 022324 161 FDESKIV-G-LIGT--RICIWRRNGLRS-VFPSREGTFMKGLCMRYFDPEAVVGCE-DG--TARVFDMYSRKCSQIIRMH 232 (299)
Q Consensus 161 ~~~~~l~-~-~~d~--~i~v~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~s~~~-d~--~i~iwd~~~~~~~~~~~~~ 232 (299)
|+++.|+ . +.++ .|++||+.+++. .+..+... ....+|+|++..|++++. ++ .|.+||+.+++. ..+..+
T Consensus 232 pdg~~la~~~~~~g~~~i~~~d~~~~~~~~l~~~~~~-~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~-~~l~~~ 309 (415)
T 2hqs_A 232 PDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSN-NTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAP-QRITWE 309 (415)
T ss_dssp TTSSEEEEEECTTSSCEEEEEETTTCCEEECCCCSSC-EEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCC-EECCCS
T ss_pred CCCCEEEEEEecCCCceEEEEECCCCCEEeCcCCCCc-ccceEECCCCCEEEEEECCCCCcEEEEEECCCCCE-EEEecC
Confidence 9999887 3 4444 599999987653 33333333 335689999998887765 44 677889987764 344456
Q ss_pred CCceeEEEeCCC-CeEEEEeCC---CcEEEEeCCCCceEEEeeccCCCCcEEEEEccCCCCeEEeeec
Q 022324 233 CAPVTSLSLSED-QLIISGSSL---GSIAISGLSSDQRVATLRSTDCTGHIICLMYPQFLHMLFFLCF 296 (299)
Q Consensus 233 ~~~i~~~~~~~~-~~l~~~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~s~s~ 296 (299)
...+.+++|+|+ ++|++++.+ ..|++||+.+++. ..+..+. .+.+++|+|+|++|++++.
T Consensus 310 ~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~-~~l~~~~---~~~~~~~spdg~~l~~~s~ 373 (415)
T 2hqs_A 310 GSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGV-QVLSSTF---LDETPSLAPNGTMVIYSSS 373 (415)
T ss_dssp SSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCE-EECCCSS---SCEEEEECTTSSEEEEEEE
T ss_pred CCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCE-EEecCCC---CcCCeEEcCCCCEEEEEEc
Confidence 678999999999 888887764 5899999998876 3454443 6899999999999988764
No 128
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.84 E-value=2.6e-20 Score=159.23 Aligned_cols=234 Identities=11% Similarity=0.027 Sum_probs=168.2
Q ss_pred chhccCcHHHHHHHhhccCccchhhHHHhhhhHHHHhhhhhHHHHHHhhhcCCCCCCCchhhhhhhhhhhccccceeecC
Q 022324 22 ATIESLNGDIICMIFSSLGFFDLVRCSAVCKSWNAIINRCKLLQLLYCKLHGFSNTSGSSMRLHLEELAMKHHRFALEEG 101 (299)
Q Consensus 22 ~~~~~~~~~~~~~i~~~~~h~~~v~~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~g 101 (299)
..+.+|+.+. ..+..+.+|.+.+.+++|+|+++.|+... . ...+..+++| ++...
T Consensus 159 ~~i~i~d~~g-~~~~~l~~~~~~v~~~~~Spdg~~la~~s---------~----~~~~~~i~~~--d~~tg--------- 213 (415)
T 2hqs_A 159 YELRVSDYDG-YNQFVVHRSPQPLMSPAWSPDGSKLAYVT---------F----ESGRSALVIQ--TLANG--------- 213 (415)
T ss_dssp EEEEEEETTS-CSCEEEEEESSCEEEEEECTTSSEEEEEE---------C----TTSSCEEEEE--ETTTC---------
T ss_pred ceEEEEcCCC-CCCEEEeCCCCcceeeEEcCCCCEEEEEE---------e----cCCCcEEEEE--ECCCC---------
Confidence 6888999873 44566678999999999999999988610 0 0011244444 33222
Q ss_pred ceeeEEeeccccCeeEEEe-cCC-EEE-EEeCCCc--EEEEecCCceeEEEecCCC-ceeEEEEecCCCEEE-EEc-CC-
Q 022324 102 RIDIDQWKAHSVGVDQCRM-KRG-LIL-TGVGDKV--MRLWSLEGYKCVEEYSLPN-AASLVDFDFDESKIV-GLI-GT- 172 (299)
Q Consensus 102 ~~~~~~~~~h~~~i~~~~~-~~~-~l~-s~~~dg~--i~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~-~~~-d~- 172 (299)
....+..|...+.++.| |++ +|+ +++.|+. |++||+.+++.. .+..+. .+..++|+|+++.|+ ++. ++
T Consensus 214 --~~~~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~-~l~~~~~~~~~~~~spdg~~l~~~s~~~g~ 290 (415)
T 2hqs_A 214 --AVRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIR-QVTDGRSNNTEPTWFPDSQNLAFTSDQAGR 290 (415)
T ss_dssp --CEEEEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-ECCCCSSCEEEEEECTTSSEEEEEECTTSS
T ss_pred --cEEEeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEE-eCcCCCCcccceEECCCCCEEEEEECCCCC
Confidence 12244678889999999 666 566 7776665 999999988764 444444 455599999999888 554 34
Q ss_pred -eEEEEecCCceee-eeccCCccceeeeeccCCCeEEEecCC---CcEEEEEcCCcceeeeccccCCceeEEEeCCC-Ce
Q 022324 173 -RICIWRRNGLRSV-FPSREGTFMKGLCMRYFDPEAVVGCED---GTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QL 246 (299)
Q Consensus 173 -~i~v~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~s~~~d---~~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~-~~ 246 (299)
.|++||+.++... +..+. ......+|+|++.+|++++.+ ..|.+||+.+++.. .+..+. .+.+++|+|+ ++
T Consensus 291 ~~i~~~d~~~~~~~~l~~~~-~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~-~l~~~~-~~~~~~~spdg~~ 367 (415)
T 2hqs_A 291 PQVYKVNINGGAPQRITWEG-SQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQ-VLSSTF-LDETPSLAPNGTM 367 (415)
T ss_dssp CEEEEEETTSSCCEECCCSS-SEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEE-ECCCSS-SCEEEEECTTSSE
T ss_pred cEEEEEECCCCCEEEEecCC-CcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEE-EecCCC-CcCCeEEcCCCCE
Confidence 7888898876532 22222 233356899999998877654 58999999988764 444444 7999999999 88
Q ss_pred EEEEeCCC---cEEEEeCCCCceEEEeeccCCCCcEEEEEccCCCC
Q 022324 247 IISGSSLG---SIAISGLSSDQRVATLRSTDCTGHIICLMYPQFLH 289 (299)
Q Consensus 247 l~~~~~dg---~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~g~ 289 (299)
|++++.++ .|++||+. ++....+..+.+ .|.+++|+|...
T Consensus 368 l~~~s~~~~~~~l~~~d~~-g~~~~~l~~~~~--~v~~~~~~~~~~ 410 (415)
T 2hqs_A 368 VIYSSSQGMGSVLNLVSTD-GRFKARLPATDG--QVKFPAWSPYLH 410 (415)
T ss_dssp EEEEEEETTEEEEEEEETT-SCCEEECCCSSS--EEEEEEECCCCC
T ss_pred EEEEEcCCCccEEEEEECC-CCcEEEeeCCCC--CCcCCccccccc
Confidence 88888777 79999986 666788888877 899999999754
No 129
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.82 E-value=5.2e-19 Score=151.87 Aligned_cols=181 Identities=11% Similarity=0.123 Sum_probs=132.4
Q ss_pred ccCeeEEEe-cC-CEEEEEeCCCcEEEEecCCc-----------e-----eEEEecCCCceeEEEEecCCCEEE-----E
Q 022324 112 SVGVDQCRM-KR-GLILTGVGDKVMRLWSLEGY-----------K-----CVEEYSLPNAASLVDFDFDESKIV-----G 168 (299)
Q Consensus 112 ~~~i~~~~~-~~-~~l~s~~~dg~i~iwd~~~~-----------~-----~~~~~~~~~~~~~~~~~~~~~~l~-----~ 168 (299)
...++.+++ ++ +++++++.|+ +++|+.... . ....+.....+..++|+|++++|+ +
T Consensus 36 ~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~sg 114 (434)
T 2oit_A 36 KERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSS 114 (434)
T ss_dssp CSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEET
T ss_pred CCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEecc
Confidence 345777877 33 3899999888 888875321 1 111223334466699999999988 2
Q ss_pred EcCCeEEEEecCCc--------e-----eeeeccCCccceeeeeccC-CCeEEEecCCCcEEEEEcCCcceeeeccccCC
Q 022324 169 LIGTRICIWRRNGL--------R-----SVFPSREGTFMKGLCMRYF-DPEAVVGCEDGTARVFDMYSRKCSQIIRMHCA 234 (299)
Q Consensus 169 ~~d~~i~v~d~~~~--------~-----~~~~~~~~~~~~~~~~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~ 234 (299)
+.|+.|++||+.+. + ..+..|...+. .++|+|. +..+++++.||.|++||++++..+.....|..
T Consensus 115 s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~-~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~~~ 193 (434)
T 2oit_A 115 EYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVI-DMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPSTV 193 (434)
T ss_dssp TTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEE-EEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEECGGG
T ss_pred CCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceE-EEEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccCCCC
Confidence 34889999998654 1 12222333333 4688887 56799999999999999998877666667888
Q ss_pred ceeEEEeCCC-CeEEEEeCCCcEEEEeCCCCceEEEeeccCC-----CCcEEEEEccCCCCeEEeee
Q 022324 235 PVTSLSLSED-QLIISGSSLGSIAISGLSSDQRVATLRSTDC-----TGHIICLMYPQFLHMLFFLC 295 (299)
Q Consensus 235 ~i~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~-----~~~i~~~~~s~~g~~l~s~s 295 (299)
.|.+++|+|+ ++|++|+.||.|++||++ ++....+..+.. ...|.+++|++++.++++.+
T Consensus 194 ~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~ 259 (434)
T 2oit_A 194 AVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYA 259 (434)
T ss_dssp CEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEE
T ss_pred ceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEecCceEEEEEc
Confidence 9999999999 999999999999999998 666666654422 11789999999988886543
No 130
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.81 E-value=2.7e-20 Score=150.92 Aligned_cols=246 Identities=10% Similarity=-0.014 Sum_probs=170.7
Q ss_pred CCCcchhccCcHHHHHHHhhccCccchhhHHHhhhhHHHHhhhhhHHHHHHhhhcCCCCCCCchhhhhhhhhhh-ccccc
Q 022324 18 SKPRATIESLNGDIICMIFSSLGFFDLVRCSAVCKSWNAIINRCKLLQLLYCKLHGFSNTSGSSMRLHLEELAM-KHHRF 96 (299)
Q Consensus 18 ~~~~~~~~~~~~~~~~~i~~~~~h~~~v~~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~d~~~~~~~~~~~~-~~~~~ 96 (299)
.+.+..+.+|+.+.... ..+..|.+.+.+++|+|++++++.. .+..+.+| ++.. ..
T Consensus 18 ~~~~~~i~~~d~~~~~~-~~~~~~~~~v~~~~~spdg~~l~~~-----------------~~~~i~~~--d~~~~~~--- 74 (297)
T 2ojh_A 18 GSMRSSIEIFNIRTRKM-RVVWQTPELFEAPNWSPDGKYLLLN-----------------SEGLLYRL--SLAGDPS--- 74 (297)
T ss_dssp CCCCEEEEEEETTTTEE-EEEEEESSCCEEEEECTTSSEEEEE-----------------ETTEEEEE--ESSSCCS---
T ss_pred CCcceeEEEEeCCCCce-eeeccCCcceEeeEECCCCCEEEEE-----------------cCCeEEEE--eCCCCCC---
Confidence 45678899999877553 3566788999999999999988861 12333344 3222 11
Q ss_pred eeecCceeeEEeecc-ccCeeEEEe-cCC-EEEEEe--CCCcEEEEec--CCceeEEEecCCCceeEEEEecCCCEEE--
Q 022324 97 ALEEGRIDIDQWKAH-SVGVDQCRM-KRG-LILTGV--GDKVMRLWSL--EGYKCVEEYSLPNAASLVDFDFDESKIV-- 167 (299)
Q Consensus 97 ~l~~g~~~~~~~~~h-~~~i~~~~~-~~~-~l~s~~--~dg~i~iwd~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~-- 167 (299)
......+| ...|.++.| +++ +|++++ .++...||.+ .+++ ...+..+.....++|+|+++.++
T Consensus 75 -------~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~spdg~~l~~~ 146 (297)
T 2ojh_A 75 -------PEKVDTGFATICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGT-PRLMTKNLPSYWHGWSPDGKSFTYC 146 (297)
T ss_dssp -------CEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCC-CEECCSSSSEEEEEECTTSSEEEEE
T ss_pred -------ceEeccccccccccceEECCCCCEEEEEEeCCCCcceEEEEECCCCc-eEEeecCCCccceEECCCCCEEEEE
Confidence 12222444 467888888 666 888888 3345555554 4544 44455555566699999999876
Q ss_pred EEcCCeEEEEecC--Cce-eeeeccCCccceeeeeccCCCeEEEec-CCCcEEEEEcC-CcceeeeccccCCceeEEEeC
Q 022324 168 GLIGTRICIWRRN--GLR-SVFPSREGTFMKGLCMRYFDPEAVVGC-EDGTARVFDMY-SRKCSQIIRMHCAPVTSLSLS 242 (299)
Q Consensus 168 ~~~d~~i~v~d~~--~~~-~~~~~~~~~~~~~~~~~~~~~~l~s~~-~d~~i~iwd~~-~~~~~~~~~~~~~~i~~~~~~ 242 (299)
+..++.+.+|++. +.. ..+..+.... ..++|++++..++.++ .++.+.+|++. .+.....+..+...+..++|+
T Consensus 147 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s 225 (297)
T 2ojh_A 147 GIRDQVFDIYSMDIDSGVETRLTHGEGRN-DGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPS 225 (297)
T ss_dssp EEETTEEEEEEEETTTCCEEECCCSSSCE-EEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEEC
T ss_pred ECCCCceEEEEEECCCCcceEcccCCCcc-ccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEEC
Confidence 6678988898864 332 2223333332 3568999999876555 58899999986 455666777777889999999
Q ss_pred CC-CeEEEEeCC-----------CcEEEEeCCCCce--EEEeeccCCCCcEEEEEccCCCCeEEeeecc
Q 022324 243 ED-QLIISGSSL-----------GSIAISGLSSDQR--VATLRSTDCTGHIICLMYPQFLHMLFFLCFL 297 (299)
Q Consensus 243 ~~-~~l~~~~~d-----------g~i~iwd~~~~~~--~~~~~~~~~~~~i~~~~~s~~g~~l~s~s~~ 297 (299)
|+ ++|++++.+ +.|.+||+.+++. +..+..+.. .+.+++|+|+|++|++++..
T Consensus 226 ~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~--~~~~~~~spdg~~l~~~~~~ 292 (297)
T 2ojh_A 226 PSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLFGGQG--TMNSPNWSPDGDEFAYVRYF 292 (297)
T ss_dssp TTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEEEEESTT--TSCSCCBCTTSSEEEEEEEC
T ss_pred CCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeeeccCCCCc--ccccceECCCCCEEEEEEec
Confidence 99 888888765 5699999988765 344445665 79999999999999988753
No 131
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.79 E-value=6e-17 Score=131.11 Aligned_cols=187 Identities=10% Similarity=-0.031 Sum_probs=137.0
Q ss_pred EEeeccccCeeEEEe-cCC-EEEEEeCCCcEEEEecCC-ceeEEEecCC--CceeEEEEecCCCEEE-EE--cC--CeEE
Q 022324 106 DQWKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEG-YKCVEEYSLP--NAASLVDFDFDESKIV-GL--IG--TRIC 175 (299)
Q Consensus 106 ~~~~~h~~~i~~~~~-~~~-~l~s~~~dg~i~iwd~~~-~~~~~~~~~~--~~~~~~~~~~~~~~l~-~~--~d--~~i~ 175 (299)
..+..|...|.++.| +++ +|++++ ++.|.+||+.+ ++.......+ ..+..++|+|+++.++ ++ .+ ..|.
T Consensus 35 ~~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~ 113 (297)
T 2ojh_A 35 RVVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEFGKSAIY 113 (297)
T ss_dssp EEEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEE
T ss_pred eeeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCCCCcceEE
Confidence 344678899999999 666 777776 88999999999 8877666555 3344599999999998 66 22 3555
Q ss_pred EEecCCceeeeeccCCccceeeeeccCCCeEE-EecCCCcEEEEEcCC-cceeeeccccCCceeEEEeCCC-CeEEEEe-
Q 022324 176 IWRRNGLRSVFPSREGTFMKGLCMRYFDPEAV-VGCEDGTARVFDMYS-RKCSQIIRMHCAPVTSLSLSED-QLIISGS- 251 (299)
Q Consensus 176 v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-s~~~d~~i~iwd~~~-~~~~~~~~~~~~~i~~~~~~~~-~~l~~~~- 251 (299)
.++..+........... ...++|++++..++ ++..++.+.+|+++. ......+..+...+.+++|+|+ ++++.++
T Consensus 114 ~~~~~~~~~~~~~~~~~-~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~ 192 (297)
T 2ojh_A 114 LLPSTGGTPRLMTKNLP-SYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWIYFNSS 192 (297)
T ss_dssp EEETTCCCCEECCSSSS-EEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSCEEEEEECTTSSEEEEEEC
T ss_pred EEECCCCceEEeecCCC-ccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCCCccccceECCCCCEEEEEec
Confidence 55655544222112222 33468999999866 778899999998642 2334455567788999999999 7776665
Q ss_pred CCCcEEEEeCC-CCceEEEeeccCCCCcEEEEEccCCCCeEEeeec
Q 022324 252 SLGSIAISGLS-SDQRVATLRSTDCTGHIICLMYPQFLHMLFFLCF 296 (299)
Q Consensus 252 ~dg~i~iwd~~-~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~s~s~ 296 (299)
.++.+++|++. .+..+..+..+.. .+.+++|+|+|++|++++.
T Consensus 193 ~~~~~~i~~~~~~~~~~~~~~~~~~--~~~~~~~s~dg~~l~~~~~ 236 (297)
T 2ojh_A 193 RTGQMQIWRVRVDGSSVERITDSAY--GDWFPHPSPSGDKVVFVSY 236 (297)
T ss_dssp TTSSCEEEEEETTSSCEEECCCCSE--EEEEEEECTTSSEEEEEEE
T ss_pred CCCCccEEEECCCCCCcEEEecCCc--ccCCeEECCCCCEEEEEEc
Confidence 58999999986 5666777776665 8999999999999988764
No 132
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.78 E-value=1.4e-18 Score=153.16 Aligned_cols=244 Identities=11% Similarity=0.087 Sum_probs=172.5
Q ss_pred cchhccCcHHHHHHHhhccCccchhhHHHhhhhHHHHhhhhhHHHHHHhhhcCCCCCCCchhhhhhhhhhhccccceeec
Q 022324 21 RATIESLNGDIICMIFSSLGFFDLVRCSAVCKSWNAIINRCKLLQLLYCKLHGFSNTSGSSMRLHLEELAMKHHRFALEE 100 (299)
Q Consensus 21 ~~~~~~~~~~~~~~i~~~~~h~~~v~~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~ 100 (299)
+.++..|+.+++..+..+..+.. +.+++|+|+++++++ ...+.++++| ++.. .
T Consensus 158 d~~V~v~D~~t~~~~~~i~~g~~-~~~v~~spdg~~l~v----------------~~~d~~V~v~--D~~~--------~ 210 (543)
T 1nir_A 158 AGQIALVDGDSKKIVKVIDTGYA-VHISRMSASGRYLLV----------------IGRDARIDMI--DLWA--------K 210 (543)
T ss_dssp GTEEEEEETTTCCEEEEEECSTT-EEEEEECTTSCEEEE----------------EETTSEEEEE--ETTS--------S
T ss_pred CCeEEEEECCCceEEEEEecCcc-cceEEECCCCCEEEE----------------ECCCCeEEEE--ECcC--------C
Confidence 56788898887766655552222 778899999998876 1134556666 3210 0
Q ss_pred CceeeEEeeccccCeeEEEe-c----CC-EEEEEe-CCCcEEEEecCCceeEEEecCC-----------C-ceeEEEEec
Q 022324 101 GRIDIDQWKAHSVGVDQCRM-K----RG-LILTGV-GDKVMRLWSLEGYKCVEEYSLP-----------N-AASLVDFDF 161 (299)
Q Consensus 101 g~~~~~~~~~h~~~i~~~~~-~----~~-~l~s~~-~dg~i~iwd~~~~~~~~~~~~~-----------~-~~~~~~~~~ 161 (299)
....+.++.. ...+..+.| + ++ ++++++ .+++|.+||..+++++..+..+ . .+..+.+++
T Consensus 211 t~~~~~~i~~-g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~ 289 (543)
T 1nir_A 211 EPTKVAEIKI-GIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASH 289 (543)
T ss_dssp SCEEEEEEEC-CSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECS
T ss_pred CCcEEEEEec-CCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECC
Confidence 1112334443 345678888 5 67 777777 5899999999999999888642 2 344589999
Q ss_pred CCCEEE--EEcCCeEEEEecCCceeee--eccCCccceeeeeccCCCeEE-EecCCCcEEEEEcCCcceeeeccc----c
Q 022324 162 DESKIV--GLIGTRICIWRRNGLRSVF--PSREGTFMKGLCMRYFDPEAV-VGCEDGTARVFDMYSRKCSQIIRM----H 232 (299)
Q Consensus 162 ~~~~l~--~~~d~~i~v~d~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~-s~~~d~~i~iwd~~~~~~~~~~~~----~ 232 (299)
++..++ ...++.|.+||..+..... ....+.....++|++++.+++ ++..+++|.+||..+++++..+.. |
T Consensus 290 ~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph 369 (543)
T 1nir_A 290 EHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPH 369 (543)
T ss_dssp SSSEEEEEETTTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBC
T ss_pred CCCEEEEEECCCCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCC
Confidence 887755 5668899999998753211 111122233468999999865 455689999999999998887763 4
Q ss_pred CCceeEEEeCCC--CeEEEEe-CCCcEEEEeCCC-------CceEEEeeccCCCCcEEEEEccCCCCeEEeee
Q 022324 233 CAPVTSLSLSED--QLIISGS-SLGSIAISGLSS-------DQRVATLRSTDCTGHIICLMYPQFLHMLFFLC 295 (299)
Q Consensus 233 ~~~i~~~~~~~~--~~l~~~~-~dg~i~iwd~~~-------~~~~~~~~~~~~~~~i~~~~~s~~g~~l~s~s 295 (299)
.+....+ ++|+ .+++++. .|++|.+||+.+ .++++++..+.. .+..++|+|+|++|++++
T Consensus 370 ~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~--~~~~v~~~pdg~~l~v~~ 439 (543)
T 1nir_A 370 PGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGG--GSLFIKTHPKSSHLYVDT 439 (543)
T ss_dssp CTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCS--CCCCEECCTTCCEEEECC
T ss_pred CCCCccc-CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCC--CceEEEcCCCCCcEEEec
Confidence 4333333 4565 5667765 689999999988 899999998876 788999999999999986
No 133
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.76 E-value=7.8e-17 Score=142.06 Aligned_cols=173 Identities=11% Similarity=0.033 Sum_probs=137.4
Q ss_pred cCC-EEEEEeCCCcEEEEecCCceeEEEecCCCceeEEEEecCCCEEE-EEcCCeEEEEec--CCceeeeeccCCcccee
Q 022324 121 KRG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIV-GLIGTRICIWRR--NGLRSVFPSREGTFMKG 196 (299)
Q Consensus 121 ~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~d~~i~v~d~--~~~~~~~~~~~~~~~~~ 196 (299)
+++ ++++++.|++|.+||..+++++.++..+..+..++|+|++++++ ++.|+.|.+||+ .+.+.......+.....
T Consensus 147 p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~g~~p~~ 226 (543)
T 1nir_A 147 LPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYAVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARS 226 (543)
T ss_dssp GGGEEEEEEGGGTEEEEEETTTCCEEEEEECSTTEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECCSEEEE
T ss_pred CCCEEEEEEcCCCeEEEEECCCceEEEEEecCcccceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEecCCCcce
Confidence 455 88889999999999999999999998554566699999999998 899999999999 66654333333333445
Q ss_pred eeecc----CCCeEEEecC-CCcEEEEEcCCcceeeeccc----------cC-CceeEEEeCCC--CeEEEEeCCCcEEE
Q 022324 197 LCMRY----FDPEAVVGCE-DGTARVFDMYSRKCSQIIRM----------HC-APVTSLSLSED--QLIISGSSLGSIAI 258 (299)
Q Consensus 197 ~~~~~----~~~~l~s~~~-d~~i~iwd~~~~~~~~~~~~----------~~-~~i~~~~~~~~--~~l~~~~~dg~i~i 258 (299)
+++++ +++++++++. ++.|.+||..+++++..+.. |. ..+..+.++|+ .++++...++.|.+
T Consensus 227 va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~v 306 (543)
T 1nir_A 227 VESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLL 306 (543)
T ss_dssp EEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEE
T ss_pred EEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEE
Confidence 78999 9999888874 89999999999998887753 22 26889999986 57788888999999
Q ss_pred EeCCCCceEE--EeeccCCCCcEEEEEccCCCCeEEeeec
Q 022324 259 SGLSSDQRVA--TLRSTDCTGHIICLMYPQFLHMLFFLCF 296 (299)
Q Consensus 259 wd~~~~~~~~--~~~~~~~~~~i~~~~~s~~g~~l~s~s~ 296 (299)
||+.+.+.+. ++. +.. .+.+++|+|+|++|++++.
T Consensus 307 vd~~~~~~l~~~~i~-~~~--~~~~~~~spdg~~l~va~~ 343 (543)
T 1nir_A 307 VNYKDIDNLTVTSIG-AAP--FLHDGGWDSSHRYFMTAAN 343 (543)
T ss_dssp EECTTSSSCEEEEEE-CCS--SCCCEEECTTSCEEEEEEG
T ss_pred EEecCCCcceeEEec-cCc--CccCceECCCCCEEEEEec
Confidence 9998876544 443 333 7889999999998887654
No 134
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.75 E-value=8.2e-16 Score=127.05 Aligned_cols=186 Identities=9% Similarity=-0.008 Sum_probs=134.5
Q ss_pred EEeeccccCeeEEEe-cCC-EEEEEeC-CCcEEEEecCCcee-EEEecCCCceeE-EEEecCCCEEEEEcCC----eEEE
Q 022324 106 DQWKAHSVGVDQCRM-KRG-LILTGVG-DKVMRLWSLEGYKC-VEEYSLPNAASL-VDFDFDESKIVGLIGT----RICI 176 (299)
Q Consensus 106 ~~~~~h~~~i~~~~~-~~~-~l~s~~~-dg~i~iwd~~~~~~-~~~~~~~~~~~~-~~~~~~~~~l~~~~d~----~i~v 176 (299)
..+..+...+ .+.+ +++ ++++++. ++.|.+||..+++. ...+..+..... ++|+|++++++++.++ .|.+
T Consensus 34 ~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v 112 (331)
T 3u4y_A 34 NQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQS 112 (331)
T ss_dssp EEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEE
T ss_pred eeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccceEECCCCCEEEEecCCCCcccEEE
Confidence 3334555556 8888 666 5555554 89999999999987 777777777777 9999999998844433 8999
Q ss_pred EecCCceeeeeccCCccceeeeeccCCCeEEE-ecCCCc-EEEEEcCCcceee----eccccCCceeEEEeCCC-CeE-E
Q 022324 177 WRRNGLRSVFPSREGTFMKGLCMRYFDPEAVV-GCEDGT-ARVFDMYSRKCSQ----IIRMHCAPVTSLSLSED-QLI-I 248 (299)
Q Consensus 177 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s-~~~d~~-i~iwd~~~~~~~~----~~~~~~~~i~~~~~~~~-~~l-~ 248 (299)
||+.+.+.......+.....++++|++.++++ ...++. +.+|++.....+. ........+..++|+|+ +++ +
T Consensus 113 ~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v 192 (331)
T 3u4y_A 113 YSFLKNKFISTIPIPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFV 192 (331)
T ss_dssp EETTTTEEEEEEECCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEE
T ss_pred EECCCCCeEEEEECCCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEE
Confidence 99988764333222333346789999987554 455688 9999987533321 11133455899999999 754 5
Q ss_pred EEeCCCcEEEEeCCCCce---EEEeeccCCCCcEEEEEccCCCCeEEeee
Q 022324 249 SGSSLGSIAISGLSSDQR---VATLRSTDCTGHIICLMYPQFLHMLFFLC 295 (299)
Q Consensus 249 ~~~~dg~i~iwd~~~~~~---~~~~~~~~~~~~i~~~~~s~~g~~l~s~s 295 (299)
++..++.|.+||+.+++. +..+.... .+..++|+|+|++|++++
T Consensus 193 ~~~~~~~v~v~d~~~~~~~~~~~~~~~~~---~~~~~~~spdg~~l~v~~ 239 (331)
T 3u4y_A 193 ANLIGNSIGILETQNPENITLLNAVGTNN---LPGTIVVSRDGSTVYVLT 239 (331)
T ss_dssp EETTTTEEEEEECSSTTSCEEEEEEECSS---CCCCEEECTTSSEEEEEC
T ss_pred EeCCCCeEEEEECCCCcccceeeeccCCC---CCceEEECCCCCEEEEEE
Confidence 555789999999999988 77776553 678999999999877654
No 135
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.74 E-value=1.6e-16 Score=136.44 Aligned_cols=153 Identities=9% Similarity=0.096 Sum_probs=113.0
Q ss_pred ccccCeeEEEe-cCC-EEE----EEeCCCcEEEEecCCc--------ee---EEEecCCCc-eeEEEEecC-CCEEE-EE
Q 022324 110 AHSVGVDQCRM-KRG-LIL----TGVGDKVMRLWSLEGY--------KC---VEEYSLPNA-ASLVDFDFD-ESKIV-GL 169 (299)
Q Consensus 110 ~h~~~i~~~~~-~~~-~l~----s~~~dg~i~iwd~~~~--------~~---~~~~~~~~~-~~~~~~~~~-~~~l~-~~ 169 (299)
.|...|.+++| +++ +|+ +|+.|+.|++||+.++ +. +..+..|.. +..++|+|+ +.+++ ++
T Consensus 90 ~~~~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s 169 (434)
T 2oit_A 90 PMKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCL 169 (434)
T ss_dssp CCSSCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEE
T ss_pred cCCCcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEE
Confidence 46778999999 566 777 8899999999998765 22 344445554 455999998 77888 99
Q ss_pred cCCeEEEEecCCceeee--eccCCccceeeeeccCCCeEEEecCCCcEEEEEcCCcceeeecccc-------CCceeEEE
Q 022324 170 IGTRICIWRRNGLRSVF--PSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMH-------CAPVTSLS 240 (299)
Q Consensus 170 ~d~~i~v~d~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~-------~~~i~~~~ 240 (299)
.||+|++||+++..... ..+...+ ..++|++++.+|++|+.||.|++||++ ++....+..+ ...|.+++
T Consensus 170 ~Dg~v~iwD~~~~~~~~~~~~~~~~v-~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~ 247 (434)
T 2oit_A 170 ADGSIAVLQVTETVKVCATLPSTVAV-TSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVL 247 (434)
T ss_dssp TTSCEEEEEESSSEEEEEEECGGGCE-EEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEE
T ss_pred CCCeEEEEEcCCCcceeeccCCCCce-eEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEE
Confidence 99999999999875432 2233333 356999999999999999999999998 5555444322 23799999
Q ss_pred eCCC-CeEEE-EeCCCc------EEEEeCCCC
Q 022324 241 LSED-QLIIS-GSSLGS------IAISGLSSD 264 (299)
Q Consensus 241 ~~~~-~~l~~-~~~dg~------i~iwd~~~~ 264 (299)
|+++ .++++ ++.||. +++|++++.
T Consensus 248 w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 248 WIGTYVFAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp EEETTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred EecCceEEEEEccCCCccCCCCceEEEEeccC
Confidence 9988 54433 334433 899999864
No 136
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.73 E-value=2e-15 Score=124.69 Aligned_cols=176 Identities=7% Similarity=-0.071 Sum_probs=131.1
Q ss_pred CeeEEEe-cCC-E-EEEEeCCCcEEEEecCCceeEEEecCCC------ceeEEEEecCCCEEE-EE------------cC
Q 022324 114 GVDQCRM-KRG-L-ILTGVGDKVMRLWSLEGYKCVEEYSLPN------AASLVDFDFDESKIV-GL------------IG 171 (299)
Q Consensus 114 ~i~~~~~-~~~-~-l~s~~~dg~i~iwd~~~~~~~~~~~~~~------~~~~~~~~~~~~~l~-~~------------~d 171 (299)
.+..+.+ +++ + ++++..++.|.+||+.+++.+..+.... .+..++|+|+++.++ +. .+
T Consensus 35 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~ 114 (337)
T 1pby_B 35 TPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQP 114 (337)
T ss_dssp CCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECC
T ss_pred CccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccC
Confidence 4677888 666 4 4566678999999999999888777543 445699999999888 54 57
Q ss_pred CeEEEEecCCceeeeeccCCccceeeeeccCCCeEEEecCCCcEEEEEcCCcceeeecccc-------------------
Q 022324 172 TRICIWRRNGLRSVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMH------------------- 232 (299)
Q Consensus 172 ~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~------------------- 232 (299)
+.|.+||+.+.+.......+.....+++++++..++++ ++.|.+||+.+++.+..+..+
T Consensus 115 ~~i~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~ 192 (337)
T 1pby_B 115 TRVALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGL--GRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQH 192 (337)
T ss_dssp CEEEEEETTTTEEEEEEECCSSCCCEEECTTSSCEEEE--SSSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCC
T ss_pred ceEEEEECCCCcEEEEEeCCCCcceeEECCCCCEEEEe--CCeEEEEECCCCcEeeeeeccccCCCceeCCCccEEeeec
Confidence 99999999887543222222223346799999988777 688999999887665433211
Q ss_pred -----------------------------------------------CCceeEEEeCCC-CeEEEEeCCCcEEEEeCCCC
Q 022324 233 -----------------------------------------------CAPVTSLSLSED-QLIISGSSLGSIAISGLSSD 264 (299)
Q Consensus 233 -----------------------------------------------~~~i~~~~~~~~-~~l~~~~~dg~i~iwd~~~~ 264 (299)
...+.+++|+|+ ++++++ ++.|.+||+.++
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~ 270 (337)
T 1pby_B 193 ESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKN 270 (337)
T ss_dssp TTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTT
T ss_pred cCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCC
Confidence 123446899999 788777 799999999999
Q ss_pred ceEEEeeccCCCCcEEEEEccCCCCeEEeeec
Q 022324 265 QRVATLRSTDCTGHIICLMYPQFLHMLFFLCF 296 (299)
Q Consensus 265 ~~~~~~~~~~~~~~i~~~~~s~~g~~l~s~s~ 296 (299)
+.+..+.... .+.+++|+|+|++|++++.
T Consensus 271 ~~~~~~~~~~---~~~~~~~s~dg~~l~~~~~ 299 (337)
T 1pby_B 271 ASIKRVPLPH---SYYSVNVSTDGSTVWLGGA 299 (337)
T ss_dssp EEEEEEECSS---CCCEEEECTTSCEEEEESB
T ss_pred cCcceecCCC---ceeeEEECCCCCEEEEEcC
Confidence 9888887554 6789999999999888753
No 137
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.73 E-value=8.1e-18 Score=153.22 Aligned_cols=185 Identities=9% Similarity=0.032 Sum_probs=134.5
Q ss_pred eeccccCeeEEEe-cCC-EEEEEeCCCcEEEEecCC-----ceeEEEecCCCc---------------eeEEEEecCCCE
Q 022324 108 WKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEG-----YKCVEEYSLPNA---------------ASLVDFDFDESK 165 (299)
Q Consensus 108 ~~~h~~~i~~~~~-~~~-~l~s~~~dg~i~iwd~~~-----~~~~~~~~~~~~---------------~~~~~~~~~~~~ 165 (299)
+..+...+..+.| |++ +|++ ..|+.|++||+.+ ++.......+.. +..+.|+||++.
T Consensus 116 l~~~~~~~~~~~~SpdG~~la~-~~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~ 194 (706)
T 2z3z_A 116 LFDTNEETASLDFSPVGDRVAY-VRNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSC 194 (706)
T ss_dssp EECCTTCCTTCEECTTSSEEEE-EETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSE
T ss_pred ccCCcccccCCcCCCCCCEEEE-EECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCE
Confidence 3456777888888 677 7777 4789999999998 877665444333 245999999999
Q ss_pred EE-EE---------------------------------cCCeEEEEecCCceeeeecc---CCccceeeeeccCCCeEEE
Q 022324 166 IV-GL---------------------------------IGTRICIWRRNGLRSVFPSR---EGTFMKGLCMRYFDPEAVV 208 (299)
Q Consensus 166 l~-~~---------------------------------~d~~i~v~d~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~s 208 (299)
|+ ++ .+..|++||+.++....... .......++|++++..+++
T Consensus 195 la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~ 274 (706)
T 2z3z_A 195 LAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYV 274 (706)
T ss_dssp EEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEE
T ss_pred EEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEE
Confidence 98 65 34689999998876322111 1122335689999999888
Q ss_pred ecCCC-----cEEEEEcCCcceeeecc--ccC---CceeEEEeCC--C-CeEEEEeCCCcEEEEeCC-CCceEEEeeccC
Q 022324 209 GCEDG-----TARVFDMYSRKCSQIIR--MHC---APVTSLSLSE--D-QLIISGSSLGSIAISGLS-SDQRVATLRSTD 274 (299)
Q Consensus 209 ~~~d~-----~i~iwd~~~~~~~~~~~--~~~---~~i~~~~~~~--~-~~l~~~~~dg~i~iwd~~-~~~~~~~~~~~~ 274 (299)
++.++ .|.+||+.+++....+. .+. ..+..++|+| + +++++++.|+.+++|++. +++.+..+..+.
T Consensus 275 ~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~ 354 (706)
T 2z3z_A 275 AEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGE 354 (706)
T ss_dssp EEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCSS
T ss_pred EEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecCCCC
Confidence 77665 89999999884333332 122 2346789999 8 889999999999999886 677777887666
Q ss_pred CCCcEEE-EEccCCCCeEEeee
Q 022324 275 CTGHIIC-LMYPQFLHMLFFLC 295 (299)
Q Consensus 275 ~~~~i~~-~~~s~~g~~l~s~s 295 (299)
. .+.. ++|+|+|+.|+.++
T Consensus 355 ~--~v~~~~~~spdg~~l~~~~ 374 (706)
T 2z3z_A 355 W--EVTNFAGFDPKGTRLYFES 374 (706)
T ss_dssp S--CEEEEEEECTTSSEEEEEE
T ss_pred e--EEEeeeEEcCCCCEEEEEe
Confidence 5 6776 79999999887654
No 138
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.73 E-value=5e-15 Score=123.22 Aligned_cols=177 Identities=8% Similarity=0.025 Sum_probs=134.5
Q ss_pred eeEEEe-cCC-EEEEEe--CCCcEEEEecCCceeEEEecCC-CceeEEEEecCCCEEE-EEcCCeEEEEecCCceeeeec
Q 022324 115 VDQCRM-KRG-LILTGV--GDKVMRLWSLEGYKCVEEYSLP-NAASLVDFDFDESKIV-GLIGTRICIWRRNGLRSVFPS 188 (299)
Q Consensus 115 i~~~~~-~~~-~l~s~~--~dg~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~-~~~d~~i~v~d~~~~~~~~~~ 188 (299)
+.++.+ +++ ++++++ .++.|.+||..+++.+..+..+ .....++|+|+++.++ +..++.+.+||..+.+.....
T Consensus 143 ~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~ 222 (353)
T 3vgz_A 143 PRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRK 222 (353)
T ss_dssp EEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEE
T ss_pred CceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEE
Confidence 567788 555 555554 5889999999999999888843 3455699999999888 888999999999987643221
Q ss_pred cC-----CccceeeeeccCCCeEEEec-CCCcEEEEEcCCcceeeeccccCCceeEEEeCCC-CeE-EEEeCCCcEEEEe
Q 022324 189 RE-----GTFMKGLCMRYFDPEAVVGC-EDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLI-ISGSSLGSIAISG 260 (299)
Q Consensus 189 ~~-----~~~~~~~~~~~~~~~l~s~~-~d~~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~-~~l-~~~~~dg~i~iwd 260 (299)
.. ......+++++++..+++++ .++.|.+||..+++.+..+.... ...++|+|+ +++ ++...++.|.+||
T Consensus 223 ~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~--~~~~~~s~dg~~l~v~~~~~~~v~~~d 300 (353)
T 3vgz_A 223 KLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPE--SLAVLFNPARNEAYVTHRQAGKVSVID 300 (353)
T ss_dssp ECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSS--CCCEEEETTTTEEEEEETTTTEEEEEE
T ss_pred EcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCC--CceEEECCCCCEEEEEECCCCeEEEEE
Confidence 11 11222468999998866554 55999999999998887775433 357899998 754 4555799999999
Q ss_pred CCCCceEEEeeccCCCCcEEEEEccCCCCeEEeeec
Q 022324 261 LSSDQRVATLRSTDCTGHIICLMYPQFLHMLFFLCF 296 (299)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~s~s~ 296 (299)
+.+++.+..+.... .+.+++|+|+|++|+++..
T Consensus 301 ~~~~~~~~~~~~~~---~~~~~~~s~dg~~l~v~~~ 333 (353)
T 3vgz_A 301 AKSYKVVKTFDTPT---HPNSLALSADGKTLYVSVK 333 (353)
T ss_dssp TTTTEEEEEEECCS---EEEEEEECTTSCEEEEEEE
T ss_pred CCCCeEEEEEecCC---CCCeEEEcCCCCEEEEEEc
Confidence 99999888887654 6899999999998777654
No 139
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.72 E-value=1.4e-15 Score=126.51 Aligned_cols=184 Identities=7% Similarity=0.002 Sum_probs=142.3
Q ss_pred cccCeeEEEe-cCC-EEEEEeC-------CCcEEEEecCCceeEEEecCCCceeEEEEecCCCEEE--EEcCCeEEEEec
Q 022324 111 HSVGVDQCRM-KRG-LILTGVG-------DKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIV--GLIGTRICIWRR 179 (299)
Q Consensus 111 h~~~i~~~~~-~~~-~l~s~~~-------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~~d~~i~v~d~ 179 (299)
....+..+.+ +++ ++++++. ++.|.+||..+++.+..+........++++|+++.++ ...++.|.+||.
T Consensus 39 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~ 118 (353)
T 3vgz_A 39 VGKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDLKPFGATINNTTQTLWFGNTVNSAVTAIDA 118 (353)
T ss_dssp EESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESSCCCSEEEETTTTEEEEEETTTTEEEEEET
T ss_pred hccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCCCcceEEECCCCCEEEEEecCCCEEEEEeC
Confidence 3446777888 555 6666664 5689999999999998888766666799999999665 444789999999
Q ss_pred CCceee--eeccCCc--------cceeeeeccCCCeEEEec--CCCcEEEEEcCCcceeeeccccCCceeEEEeCCC-Ce
Q 022324 180 NGLRSV--FPSREGT--------FMKGLCMRYFDPEAVVGC--EDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QL 246 (299)
Q Consensus 180 ~~~~~~--~~~~~~~--------~~~~~~~~~~~~~l~s~~--~d~~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~-~~ 246 (299)
.+++.. +...... ....+++++++..+++++ .++.|.+||..+++.+..+..+...+..++|+|+ ++
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~ 198 (353)
T 3vgz_A 119 KTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKR 198 (353)
T ss_dssp TTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTE
T ss_pred CCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCCCCE
Confidence 887532 2222111 123468899998866654 5788999999999988888645666889999999 88
Q ss_pred EEEEeCCCcEEEEeCCCCceEEEeec----cCCCCcEEEEEccCCCCeEEeeec
Q 022324 247 IISGSSLGSIAISGLSSDQRVATLRS----TDCTGHIICLMYPQFLHMLFFLCF 296 (299)
Q Consensus 247 l~~~~~dg~i~iwd~~~~~~~~~~~~----~~~~~~i~~~~~s~~g~~l~s~s~ 296 (299)
+++++.++.|.+||+.+++.+..+.. +.. .+.+++|+|+|++|++++.
T Consensus 199 l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~--~~~~~~~s~dg~~l~~~~~ 250 (353)
T 3vgz_A 199 LYTTNADGELITIDTADNKILSRKKLLDDGKEH--FFINISLDTARQRAFITDS 250 (353)
T ss_dssp EEEECTTSEEEEEETTTTEEEEEEECCCSSSCC--CEEEEEEETTTTEEEEEES
T ss_pred EEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCc--ccceEEECCCCCEEEEEeC
Confidence 99999999999999999998888765 233 6889999999998877653
No 140
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.72 E-value=2.4e-15 Score=124.52 Aligned_cols=247 Identities=10% Similarity=0.038 Sum_probs=159.8
Q ss_pred cchhccCcHHHHH--HHhhccCccchhhHHHhhhhHHHHhhhhhHHHHHHhhhcCCCCCCCchhhhhhhhhhhcccccee
Q 022324 21 RATIESLNGDIIC--MIFSSLGFFDLVRCSAVCKSWNAIINRCKLLQLLYCKLHGFSNTSGSSMRLHLEELAMKHHRFAL 98 (299)
Q Consensus 21 ~~~~~~~~~~~~~--~i~~~~~h~~~v~~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l 98 (299)
+..+..|+.+... .......|...+.+++|+|++++++.. ...+..+++|.. ..
T Consensus 14 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~---------------~~~~~~v~~~~~--~~------- 69 (343)
T 1ri6_A 14 SQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVG---------------VRPEFRVLAYRI--AP------- 69 (343)
T ss_dssp GTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEE---------------ETTTTEEEEEEE--CT-------
T ss_pred CCeEEEEEECCCCcEEEeeeEecCCCCceEEECCCCCEEEEe---------------ecCCCeEEEEEe--cC-------
Confidence 4566777653211 122334577778889999999877640 112244555522 10
Q ss_pred ecCce-eeEEeeccccCeeEEEe-cCC-EEEEEe-CCCcEEEEec---CCceeEEEecCCCceeEEEEecCCCEEE-EE-
Q 022324 99 EEGRI-DIDQWKAHSVGVDQCRM-KRG-LILTGV-GDKVMRLWSL---EGYKCVEEYSLPNAASLVDFDFDESKIV-GL- 169 (299)
Q Consensus 99 ~~g~~-~~~~~~~h~~~i~~~~~-~~~-~l~s~~-~dg~i~iwd~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~- 169 (299)
..+.. .+..+..+. .+..+.| +++ +|++++ .++.|.+||+ .+.+.+..+..+..+..++|+|+++.++ ++
T Consensus 70 ~~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~ 148 (343)
T 1ri6_A 70 DDGALTFAAESALPG-SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPAL 148 (343)
T ss_dssp TTCCEEEEEEEECSS-CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEG
T ss_pred CCCceeeccccccCC-CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccCCCCceEEEECCCCCEEEEecC
Confidence 01111 123334433 7788888 666 665555 5889999999 4556666777666666799999999877 55
Q ss_pred cCCeEEEEecCC-cee------eeeccCCccceeeeeccCCCeEE-EecCCCcEEEEEcCC--cce--eeecc---cc--
Q 022324 170 IGTRICIWRRNG-LRS------VFPSREGTFMKGLCMRYFDPEAV-VGCEDGTARVFDMYS--RKC--SQIIR---MH-- 232 (299)
Q Consensus 170 ~d~~i~v~d~~~-~~~------~~~~~~~~~~~~~~~~~~~~~l~-s~~~d~~i~iwd~~~--~~~--~~~~~---~~-- 232 (299)
.++.|.+||+.+ +.. ......+.....+++++++.+++ ++..++.|.+||+.. ++. ...+. ..
T Consensus 149 ~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~ 228 (343)
T 1ri6_A 149 KQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFS 228 (343)
T ss_dssp GGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCC
T ss_pred CCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCcccc
Confidence 789999999987 432 22223333333568999998765 455889999999953 332 22221 11
Q ss_pred -CCceeEEEeCCC-CeEE-EEeCCCcEEEEeCC--C--CceEEEeeccCCCCcEEEEEccCCCCeEEeee
Q 022324 233 -CAPVTSLSLSED-QLII-SGSSLGSIAISGLS--S--DQRVATLRSTDCTGHIICLMYPQFLHMLFFLC 295 (299)
Q Consensus 233 -~~~i~~~~~~~~-~~l~-~~~~dg~i~iwd~~--~--~~~~~~~~~~~~~~~i~~~~~s~~g~~l~s~s 295 (299)
...+..++|+|+ ++|+ ++..++.|.+||+. + .+.+..+..+. .+.+++|+|+|++|++++
T Consensus 229 ~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~---~~~~~~~s~dg~~l~~~~ 295 (343)
T 1ri6_A 229 DTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTET---QPRGFNVDHSGKYLIAAG 295 (343)
T ss_dssp SCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSS---SCCCEEECTTSSEEEEEC
T ss_pred ccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCC---ccceEEECCCCCEEEEec
Confidence 235678999999 6666 55579999999998 2 34444454433 588999999999888876
No 141
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.72 E-value=5e-17 Score=148.36 Aligned_cols=219 Identities=6% Similarity=0.011 Sum_probs=150.2
Q ss_pred hhHHHhhhhHHHHhhhhhHHHHHHhhhcCCCCCCCchhhhhhhhhhhccccceeecCceeeEEeecccc---CeeEEEe-
Q 022324 45 VRCSAVCKSWNAIINRCKLLQLLYCKLHGFSNTSGSSMRLHLEELAMKHHRFALEEGRIDIDQWKAHSV---GVDQCRM- 120 (299)
Q Consensus 45 v~~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~h~~---~i~~~~~- 120 (299)
..+++|+|+++++++ ..|+.+++| ++...... ..+.+|.. .|.++.|
T Consensus 19 ~~~~~~spdg~~~~~-----------------~~dg~i~~~--d~~~g~~~----------~~~~~~~~~~~~v~~~~~S 69 (723)
T 1xfd_A 19 DPEAKWISDTEFIYR-----------------EQKGTVRLW--NVETNTST----------VLIEGKKIESLRAIRYEIS 69 (723)
T ss_dssp CCCCCBSSSSCBCCC-----------------CSSSCEEEB--CGGGCCCE----------EEECTTTTTTTTCSEEEEC
T ss_pred ccccEEcCCCcEEEE-----------------eCCCCEEEE--ECCCCcEE----------EEeccccccccccceEEEC
Confidence 567788888886553 134556666 33332222 23355554 4899999
Q ss_pred cCC-EEEEEeCC---------CcEEEEecCCceeEEEecC---CCc-eeEEEEecCCCEEEEEcCCeEEEEecCCceee-
Q 022324 121 KRG-LILTGVGD---------KVMRLWSLEGYKCVEEYSL---PNA-ASLVDFDFDESKIVGLIGTRICIWRRNGLRSV- 185 (299)
Q Consensus 121 ~~~-~l~s~~~d---------g~i~iwd~~~~~~~~~~~~---~~~-~~~~~~~~~~~~l~~~~d~~i~v~d~~~~~~~- 185 (299)
|++ +|++++.+ +.+.+||+.+++. ..+.. +.. +..++|+|||+.|+...++.|++||+.++...
T Consensus 70 pDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~~la~~~~~~i~~~~~~~g~~~~ 148 (723)
T 1xfd_A 70 PDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQQLIFIFENNIYYCAHVGKQAIR 148 (723)
T ss_dssp TTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC-EECCCTTCCSCCCSBCCBCSSTTCEEEEETTEEEEESSSSSCCEE
T ss_pred CCCCEEEEEecCccceeecceeeEEEEECCCCce-EeccCCccccccccccEECCCCCEEEEEECCeEEEEECCCCceEE
Confidence 677 88888764 7888999999876 33332 222 44599999999999555689999999876422
Q ss_pred -eeccCCcc-----------------ceeeeeccCCCeEEEecCCC----------------------------------
Q 022324 186 -FPSREGTF-----------------MKGLCMRYFDPEAVVGCEDG---------------------------------- 213 (299)
Q Consensus 186 -~~~~~~~~-----------------~~~~~~~~~~~~l~s~~~d~---------------------------------- 213 (299)
........ ...++|+|++..|++++.++
T Consensus 149 ~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~ 228 (723)
T 1xfd_A 149 VVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSI 228 (723)
T ss_dssp EECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEE
T ss_pred EecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCee
Confidence 22211111 13478999999988876543
Q ss_pred cEEEEEcCCcceeeecccc------CCceeEEEeCCC-CeEEEEeC----CCcEEEEeCCCCceEEEeeccCCCCcE---
Q 022324 214 TARVFDMYSRKCSQIIRMH------CAPVTSLSLSED-QLIISGSS----LGSIAISGLSSDQRVATLRSTDCTGHI--- 279 (299)
Q Consensus 214 ~i~iwd~~~~~~~~~~~~~------~~~i~~~~~~~~-~~l~~~~~----dg~i~iwd~~~~~~~~~~~~~~~~~~i--- 279 (299)
.|.+||+.+++....+..+ ...+..++|+|| +++++.+. +..|++||+.++++...+..+... .+
T Consensus 229 ~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~-~~~~~ 307 (723)
T 1xfd_A 229 SLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEA-WLHRQ 307 (723)
T ss_dssp EEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSS-CCCCC
T ss_pred EEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCC-EEecc
Confidence 7999999988765555443 567899999999 77766643 357999999999877766543321 33
Q ss_pred -EEEEccCCCCeEEee
Q 022324 280 -ICLMYPQFLHMLFFL 294 (299)
Q Consensus 280 -~~~~~s~~g~~l~s~ 294 (299)
..++|+|||+.|+..
T Consensus 308 ~~~~~~spdg~~l~~~ 323 (723)
T 1xfd_A 308 NEEPVFSKDGRKFFFI 323 (723)
T ss_dssp CCCCEECTTSCSEEEE
T ss_pred CCCceEcCCCCeEEEE
Confidence 378999999988764
No 142
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.71 E-value=7.6e-15 Score=121.48 Aligned_cols=186 Identities=11% Similarity=0.031 Sum_probs=127.7
Q ss_pred ccccCeeEEEe-cCC-EEEEEeCC-CcEEEEecC--Cce--eEEEecCCCceeEEEEecCCCEEE-EEc-CCeEEEEecC
Q 022324 110 AHSVGVDQCRM-KRG-LILTGVGD-KVMRLWSLE--GYK--CVEEYSLPNAASLVDFDFDESKIV-GLI-GTRICIWRRN 180 (299)
Q Consensus 110 ~h~~~i~~~~~-~~~-~l~s~~~d-g~i~iwd~~--~~~--~~~~~~~~~~~~~~~~~~~~~~l~-~~~-d~~i~v~d~~ 180 (299)
.|...+.++.| +++ +|++++.+ +.|.+|++. +++ .+..+..+..+..++|+|+++.++ ++. ++.|.+||+.
T Consensus 35 ~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~ 114 (343)
T 1ri6_A 35 DVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLE 114 (343)
T ss_dssp ECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSSCCSEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred ecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCCCCcEEEEcCCCCEEEEEecCCCeEEEEECC
Confidence 56778888998 666 78888876 999999997 554 445565555666799999999876 544 7899999994
Q ss_pred C---ceeeeeccCCccceeeeeccCCCeEEEec-CCCcEEEEEcCC-cceee----ecc-ccCCceeEEEeCCC-CeEEE
Q 022324 181 G---LRSVFPSREGTFMKGLCMRYFDPEAVVGC-EDGTARVFDMYS-RKCSQ----IIR-MHCAPVTSLSLSED-QLIIS 249 (299)
Q Consensus 181 ~---~~~~~~~~~~~~~~~~~~~~~~~~l~s~~-~d~~i~iwd~~~-~~~~~----~~~-~~~~~i~~~~~~~~-~~l~~ 249 (299)
. ...............+++++++..+++++ .++.|.+||+.+ ++... .+. .....+..++|+|+ +++++
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~ 194 (343)
T 1ri6_A 115 DGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYC 194 (343)
T ss_dssp TTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEE
T ss_pred CCccccccccccCCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEE
Confidence 2 22222212222233568999998877766 889999999987 54432 222 23446889999999 75554
Q ss_pred -EeCCCcEEEEeCCC--Cce--EEEeec---c-CCCCcEEEEEccCCCCeEEeee
Q 022324 250 -GSSLGSIAISGLSS--DQR--VATLRS---T-DCTGHIICLMYPQFLHMLFFLC 295 (299)
Q Consensus 250 -~~~dg~i~iwd~~~--~~~--~~~~~~---~-~~~~~i~~~~~s~~g~~l~s~s 295 (299)
+..++.|.+||+.. ++. ...+.. . .....+..++|+|+|++|+++.
T Consensus 195 ~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~ 249 (343)
T 1ri6_A 195 VNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACD 249 (343)
T ss_dssp EETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEE
T ss_pred EeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEe
Confidence 45799999999953 433 333321 1 1112577899999999887554
No 143
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.71 E-value=2.8e-17 Score=150.44 Aligned_cols=180 Identities=13% Similarity=0.023 Sum_probs=131.4
Q ss_pred CeeEEEe-cCC-EEEEEeCCCcEEEEecCCc---eeEEEecCC-CceeEEEEecCCCEEEEEcCCeEEEEecCCceeeee
Q 022324 114 GVDQCRM-KRG-LILTGVGDKVMRLWSLEGY---KCVEEYSLP-NAASLVDFDFDESKIVGLIGTRICIWRRNGLRSVFP 187 (299)
Q Consensus 114 ~i~~~~~-~~~-~l~s~~~dg~i~iwd~~~~---~~~~~~~~~-~~~~~~~~~~~~~~l~~~~d~~i~v~d~~~~~~~~~ 187 (299)
.|.++.| |++ +|++++. +.|.+||+.++ +.. .+..+ ..+..++|+|||+.|+...++.|++||+.++.....
T Consensus 110 ~v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~-~l~~~~~~~~~~~~SPDG~~la~~~~~~i~~~d~~~g~~~~~ 187 (741)
T 2ecf_A 110 GIVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVR-QLTHGEGFATDAKLSPKGGFVSFIRGRNLWVIDLASGRQMQL 187 (741)
T ss_dssp ESCCCEECTTSSEEEEEET-TEEEEEESSSCSTTSCC-BCCCSSSCEEEEEECTTSSEEEEEETTEEEEEETTTTEEEEC
T ss_pred CcceeEECCCCCEEEEEeC-CcEEEEECCCCCcceEE-EcccCCcccccccCCCCCCEEEEEeCCcEEEEecCCCCEEEe
Confidence 3778888 677 7888776 99999999988 443 34444 445569999999999955678999999988653221
Q ss_pred ccCCcc-----------------ceeeeeccCCCeEEEecCCC---------------------------------cEEE
Q 022324 188 SREGTF-----------------MKGLCMRYFDPEAVVGCEDG---------------------------------TARV 217 (299)
Q Consensus 188 ~~~~~~-----------------~~~~~~~~~~~~l~s~~~d~---------------------------------~i~i 217 (299)
...+.. ...++|+|+++.|++++.|+ .|.+
T Consensus 188 ~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~ 267 (741)
T 2ecf_A 188 TADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGV 267 (741)
T ss_dssp CCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEE
T ss_pred ccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEE
Confidence 111110 13468999999988887665 7889
Q ss_pred EEcCC-cceeeecc--ccCCceeEEEeCCC-CeEEEEeC-----CCcEEEEeCCCCceEEEeeccCCC--CcEEEEEccC
Q 022324 218 FDMYS-RKCSQIIR--MHCAPVTSLSLSED-QLIISGSS-----LGSIAISGLSSDQRVATLRSTDCT--GHIICLMYPQ 286 (299)
Q Consensus 218 wd~~~-~~~~~~~~--~~~~~i~~~~~~~~-~~l~~~~~-----dg~i~iwd~~~~~~~~~~~~~~~~--~~i~~~~~s~ 286 (299)
||+.+ ++...... .+...+..++| || ++|++++. +..|++||+.+++....+..+... ..+..++|+|
T Consensus 268 ~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~sp 346 (741)
T 2ecf_A 268 ISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLD 346 (741)
T ss_dssp ECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECT
T ss_pred EECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECC
Confidence 99988 77654432 36778999999 99 88876653 567999999999887777655421 0245789999
Q ss_pred CCCeEEeeec
Q 022324 287 FLHMLFFLCF 296 (299)
Q Consensus 287 ~g~~l~s~s~ 296 (299)
||+++++++.
T Consensus 347 dg~~~~~~~~ 356 (741)
T 2ecf_A 347 DGSILWSSER 356 (741)
T ss_dssp TSCEEEEECT
T ss_pred CCeEEEEecC
Confidence 9998877653
No 144
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.71 E-value=1.7e-16 Score=144.86 Aligned_cols=178 Identities=9% Similarity=0.012 Sum_probs=133.7
Q ss_pred CeeEEEe-cCC-EEEEEeCCCcEEEEecCCceeEEEecCCCc----eeEEEEecCCCEEE-EEcC---------CeEEEE
Q 022324 114 GVDQCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNA----ASLVDFDFDESKIV-GLIG---------TRICIW 177 (299)
Q Consensus 114 ~i~~~~~-~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~-~~~d---------~~i~v~ 177 (299)
.+.++.| +++ ++++ +.||+|++||..+++....+..+.. +..++|+||+++|+ ++.+ +.+++|
T Consensus 18 ~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~ 96 (723)
T 1xfd_A 18 HDPEAKWISDTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLS 96 (723)
T ss_dssp CCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEE
T ss_pred cccccEEcCCCcEEEE-eCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEE
Confidence 3556777 666 5555 7899999999999998888876653 66799999999998 6553 789999
Q ss_pred ecCCcee-eeeccCCcc--ceeeeeccCCCeEEEecCCCcEEEEEcCCcceeeeccccCCce------------------
Q 022324 178 RRNGLRS-VFPSREGTF--MKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPV------------------ 236 (299)
Q Consensus 178 d~~~~~~-~~~~~~~~~--~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i------------------ 236 (299)
|+.+++. .+....++. ....+|+|+++.++.++. +.|++||+.+++.......+...+
T Consensus 97 d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~ 175 (723)
T 1xfd_A 97 KIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTH 175 (723)
T ss_dssp ESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSS
T ss_pred ECCCCceEeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCc
Confidence 9988753 222222221 224689999999988876 789999999887765554433323
Q ss_pred eEEEeCCC-CeEEEEeCCC----------------------------------cEEEEeCCCCceEEEeecc------CC
Q 022324 237 TSLSLSED-QLIISGSSLG----------------------------------SIAISGLSSDQRVATLRST------DC 275 (299)
Q Consensus 237 ~~~~~~~~-~~l~~~~~dg----------------------------------~i~iwd~~~~~~~~~~~~~------~~ 275 (299)
.+++|+|| +.|++++.|+ .|++||+.+++....+..+ ..
T Consensus 176 ~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~ 255 (723)
T 1xfd_A 176 IAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREY 255 (723)
T ss_dssp EEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSE
T ss_pred ceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccc
Confidence 78999999 8888887553 7999999988866666654 33
Q ss_pred CCcEEEEEccCCCCeEEeee
Q 022324 276 TGHIICLMYPQFLHMLFFLC 295 (299)
Q Consensus 276 ~~~i~~~~~s~~g~~l~s~s 295 (299)
.+.+++|+|||++|++.+
T Consensus 256 --~~~~~~~SpDg~~l~~~~ 273 (723)
T 1xfd_A 256 --YITMVKWATSTKVAVTWL 273 (723)
T ss_dssp --EEEEEEESSSSEEEEEEE
T ss_pred --eeEEEEEeCCCeEEEEEE
Confidence 789999999999887653
No 145
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.70 E-value=8.8e-16 Score=140.56 Aligned_cols=180 Identities=10% Similarity=-0.015 Sum_probs=135.2
Q ss_pred ccCeeEEEe-cCC-EEEEEeC-CC-----cEEEEecCCceeEEEecCCCc-------------------------eeEEE
Q 022324 112 SVGVDQCRM-KRG-LILTGVG-DK-----VMRLWSLEGYKCVEEYSLPNA-------------------------ASLVD 158 (299)
Q Consensus 112 ~~~i~~~~~-~~~-~l~s~~~-dg-----~i~iwd~~~~~~~~~~~~~~~-------------------------~~~~~ 158 (299)
...+..+.| +++ +|++++. |+ .|++||+.+++....+..+.. +..++
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ 115 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence 446888999 677 8999988 88 999999999988776654321 34599
Q ss_pred EecCCCEEEEEcCCeEEEEecCCc---e-eeeeccCCccceeeeeccCCCeEEEecCCCcEEEEEcCCcceeeeccccCC
Q 022324 159 FDFDESKIVGLIGTRICIWRRNGL---R-SVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCA 234 (299)
Q Consensus 159 ~~~~~~~l~~~~d~~i~v~d~~~~---~-~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~ 234 (299)
|+||++.|+.+.++.|++||+.++ . ..+..+... ....+|+|+++.++.++ ++.|++||+.+++.......+..
T Consensus 116 ~SpDg~~l~~~~~~~i~~~d~~~~~~~~~~~l~~~~~~-~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~~~~~~~~~ 193 (741)
T 2ecf_A 116 WSPDAQRLLFPLGGELYLYDLKQEGKAAVRQLTHGEGF-ATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQMQLTADGST 193 (741)
T ss_dssp ECTTSSEEEEEETTEEEEEESSSCSTTSCCBCCCSSSC-EEEEEECTTSSEEEEEE-TTEEEEEETTTTEEEECCCCCCS
T ss_pred ECCCCCEEEEEeCCcEEEEECCCCCcceEEEcccCCcc-cccccCCCCCCEEEEEe-CCcEEEEecCCCCEEEeccCCcc
Confidence 999999999444599999999876 4 223333333 33568999999988877 46899999998876654433332
Q ss_pred c----------------eeEEEeCCC-CeEEEEeCCC---------------------------------cEEEEeCCC-
Q 022324 235 P----------------VTSLSLSED-QLIISGSSLG---------------------------------SIAISGLSS- 263 (299)
Q Consensus 235 ~----------------i~~~~~~~~-~~l~~~~~dg---------------------------------~i~iwd~~~- 263 (299)
. +..++|+|| ++|++++.|+ .|.+||+.+
T Consensus 194 ~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~ 273 (741)
T 2ecf_A 194 TIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQ 273 (741)
T ss_dssp SEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTT
T ss_pred ceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCC
Confidence 2 478999999 8888887765 789999988
Q ss_pred CceEEEeec--cCCCCcEEEEEccCCCCeEEeeec
Q 022324 264 DQRVATLRS--TDCTGHIICLMYPQFLHMLFFLCF 296 (299)
Q Consensus 264 ~~~~~~~~~--~~~~~~i~~~~~s~~g~~l~s~s~ 296 (299)
++....... +.. .+..++| |||++|+.++.
T Consensus 274 ~~~~~~~~~~~~~~--~~~~~~~-pDg~~l~~~~~ 305 (741)
T 2ecf_A 274 AQTQWIDLGKEQDI--YLARVNW-RDPQHLSFQRQ 305 (741)
T ss_dssp CCCEEECCCSCSSE--EEEEEEE-EETTEEEEEEE
T ss_pred CceEEecCCCCcce--EEEEEEe-CCCCEEEEEEe
Confidence 776544432 334 7999999 99999997653
No 146
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.70 E-value=4.5e-15 Score=122.54 Aligned_cols=146 Identities=7% Similarity=-0.062 Sum_probs=113.6
Q ss_pred EEEEEeCCCcEEEEecCCceeEEEecCCC---ceeEEEEecCCCEEE--EEcCCeEEEEecCCceeeeeccCCc------
Q 022324 124 LILTGVGDKVMRLWSLEGYKCVEEYSLPN---AASLVDFDFDESKIV--GLIGTRICIWRRNGLRSVFPSREGT------ 192 (299)
Q Consensus 124 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~--~~~d~~i~v~d~~~~~~~~~~~~~~------ 192 (299)
++++++.++.|.+||..+++.+..+.... .+..++|+|+++.++ ...++.|.+||+.+.+.........
T Consensus 3 ~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~ 82 (337)
T 1pby_B 3 YILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVK 82 (337)
T ss_dssp EEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEE
T ss_pred EEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccc
Confidence 78999999999999999999998887655 466799999998765 4457899999998775332211111
Q ss_pred cceeeeeccCCCeEEEec------------CCCcEEEEEcCCcceeeeccccCCceeEEEeCCC-CeEEEEeCCCcEEEE
Q 022324 193 FMKGLCMRYFDPEAVVGC------------EDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGSSLGSIAIS 259 (299)
Q Consensus 193 ~~~~~~~~~~~~~l~s~~------------~d~~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~-~~l~~~~~dg~i~iw 259 (299)
....+++++++..++++. .++.|.+||+.+++.+..+.. ...+..++|+|+ ++++++ ++.|.+|
T Consensus 83 ~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~--~~~i~~~ 159 (337)
T 1pby_B 83 SLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGL--GRDLHVM 159 (337)
T ss_dssp CTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEE--SSSEEEE
T ss_pred cccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEEEe--CCeEEEE
Confidence 222468899998888775 579999999998888777754 456888999999 777777 6889999
Q ss_pred eCCCCceEEEeec
Q 022324 260 GLSSDQRVATLRS 272 (299)
Q Consensus 260 d~~~~~~~~~~~~ 272 (299)
|+.+++.+..+..
T Consensus 160 d~~~~~~~~~~~~ 172 (337)
T 1pby_B 160 DPEAGTLVEDKPI 172 (337)
T ss_dssp ETTTTEEEEEECS
T ss_pred ECCCCcEeeeeec
Confidence 9998887766543
No 147
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.69 E-value=1.5e-14 Score=119.49 Aligned_cols=169 Identities=12% Similarity=0.060 Sum_probs=124.1
Q ss_pred EEEEEeCCCcEEEEecCCceeEEEecCCCceeEEEEecCCCEEE-EEc-CCeEEEEecCCcee-eeeccC-Cccceeeee
Q 022324 124 LILTGVGDKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIV-GLI-GTRICIWRRNGLRS-VFPSRE-GTFMKGLCM 199 (299)
Q Consensus 124 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~-d~~i~v~d~~~~~~-~~~~~~-~~~~~~~~~ 199 (299)
.+++.+.++.|.+||..+++.+..+..+.....++|+|+++.++ ++. ++.|.+||..+... ...... ......+++
T Consensus 12 ~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~ 91 (331)
T 3u4y_A 12 GIVVEQHLRRISFFSTDTLEILNQITLGYDFVDTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDI 91 (331)
T ss_dssp EEEEEGGGTEEEEEETTTCCEEEEEECCCCEEEEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEE
T ss_pred EEEEecCCCeEEEEeCcccceeeeEEccCCcceEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccceEE
Confidence 68888999999999999999988877654444899999999766 544 78999999987753 222222 222222689
Q ss_pred ccCCCeEEEecCCC---cEEEEEcCCcceeeeccccCCceeEEEeCCC-C-eEEEEeCCCc-EEEEeCCCCceEE----E
Q 022324 200 RYFDPEAVVGCEDG---TARVFDMYSRKCSQIIRMHCAPVTSLSLSED-Q-LIISGSSLGS-IAISGLSSDQRVA----T 269 (299)
Q Consensus 200 ~~~~~~l~s~~~d~---~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~-~-~l~~~~~dg~-i~iwd~~~~~~~~----~ 269 (299)
++++.+++++..++ .|.+||+.+++.+..+.. ...+.+++|+|+ + ++++...++. |.+|++.....+. .
T Consensus 92 s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~ 170 (331)
T 3u4y_A 92 TPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPI-PYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQE 170 (331)
T ss_dssp CTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEEC-CTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEE
T ss_pred CCCCCEEEEecCCCCcccEEEEECCCCCeEEEEEC-CCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCc
Confidence 99999988655553 899999999988887754 445799999999 6 4555566688 9999987643331 1
Q ss_pred eeccCCCCcEEEEEccCCCCeEEeee
Q 022324 270 LRSTDCTGHIICLMYPQFLHMLFFLC 295 (299)
Q Consensus 270 ~~~~~~~~~i~~~~~s~~g~~l~s~s 295 (299)
...... .+..++|+|+|++|++++
T Consensus 171 ~~~~~~--~~~~~~~spdg~~l~v~~ 194 (331)
T 3u4y_A 171 FISGGT--RPFNITFTPDGNFAFVAN 194 (331)
T ss_dssp EECSSS--SEEEEEECTTSSEEEEEE
T ss_pred cccCCC--CccceEECCCCCEEEEEe
Confidence 112223 689999999999776655
No 148
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.67 E-value=3.6e-14 Score=118.03 Aligned_cols=188 Identities=9% Similarity=0.066 Sum_probs=127.6
Q ss_pred EeeccccCeeEEEe-cCC-EEEEEe-CCCcEEEEecC-Cc--eeEEEecCCC----------ceeEEEEecCCCEEE-EE
Q 022324 107 QWKAHSVGVDQCRM-KRG-LILTGV-GDKVMRLWSLE-GY--KCVEEYSLPN----------AASLVDFDFDESKIV-GL 169 (299)
Q Consensus 107 ~~~~h~~~i~~~~~-~~~-~l~s~~-~dg~i~iwd~~-~~--~~~~~~~~~~----------~~~~~~~~~~~~~l~-~~ 169 (299)
.+..+...+..++| +++ +|++++ .++.|.+|++. ++ +.+..+.... .+..++|+|++++++ ..
T Consensus 80 ~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~ 159 (347)
T 3hfq_A 80 TVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDL 159 (347)
T ss_dssp EEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEET
T ss_pred eeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeC
Confidence 33456777888888 666 777777 78999999996 33 3344443221 244599999999555 45
Q ss_pred cCCeEEEEecC-Cceee----eeccCCccceeeeeccCCCeEEE-ecCCCcEEEEEcCC--cce--eeeccccC------
Q 022324 170 IGTRICIWRRN-GLRSV----FPSREGTFMKGLCMRYFDPEAVV-GCEDGTARVFDMYS--RKC--SQIIRMHC------ 233 (299)
Q Consensus 170 ~d~~i~v~d~~-~~~~~----~~~~~~~~~~~~~~~~~~~~l~s-~~~d~~i~iwd~~~--~~~--~~~~~~~~------ 233 (299)
.++.|.+|++. ++... +....+.....+++++++.++++ ...++.+.+|++.. ++. +..+....
T Consensus 160 ~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~ 239 (347)
T 3hfq_A 160 GSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAH 239 (347)
T ss_dssp TTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSC
T ss_pred CCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCC
Confidence 57899999998 33211 12222322334689999997554 66788999999874 442 22222211
Q ss_pred CceeEEEeCCC-CeE-EEEeCCCcEEEEeCCCC---ceEEEeeccCCCCcEEEEEccCCCCeEEeeec
Q 022324 234 APVTSLSLSED-QLI-ISGSSLGSIAISGLSSD---QRVATLRSTDCTGHIICLMYPQFLHMLFFLCF 296 (299)
Q Consensus 234 ~~i~~~~~~~~-~~l-~~~~~dg~i~iwd~~~~---~~~~~~~~~~~~~~i~~~~~s~~g~~l~s~s~ 296 (299)
..+..++|+|+ ++| ++...++.|.+|++... +.+..+..+.. .+..++|+|+|++|++++.
T Consensus 240 ~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~--~~~~~~~spdg~~l~v~~~ 305 (347)
T 3hfq_A 240 NGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGD--FPRDFDLDPTEAFVVVVNQ 305 (347)
T ss_dssp CEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSS--CCCEEEECTTSSEEEEEET
T ss_pred CcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCC--CcCeEEECCCCCEEEEEEc
Confidence 45889999999 766 55667899999999732 45555555444 6889999999999988764
No 149
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.67 E-value=4.2e-15 Score=135.32 Aligned_cols=183 Identities=14% Similarity=0.050 Sum_probs=132.9
Q ss_pred cCeeEEEe-cCCEEEEEeCCCcEEEEecCCceeEEEecCCCceeEEEEecCCCEEEEEcCCeEEEEecCC-----ceeee
Q 022324 113 VGVDQCRM-KRGLILTGVGDKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIVGLIGTRICIWRRNG-----LRSVF 186 (299)
Q Consensus 113 ~~i~~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~i~v~d~~~-----~~~~~ 186 (299)
..|.++.| +++.++.+ .++.|++||+.+++..........+..++|+|+++.|+.+.++.|++||+.+ ++...
T Consensus 82 ~~v~~~~~spd~~~~~~-~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~SpdG~~la~~~~~~i~v~~~~~~~~~~g~~~~ 160 (706)
T 2z3z_A 82 FPSFRTLDAGRGLVVLF-TQGGLVGFDMLARKVTYLFDTNEETASLDFSPVGDRVAYVRNHNLYIARGGKLGEGMSRAIA 160 (706)
T ss_dssp CCCEEEEETTTTEEEEE-ETTEEEEEETTTTEEEEEECCTTCCTTCEECTTSSEEEEEETTEEEEEECBCTTSCCCCCEE
T ss_pred cCceeEEECCCCeEEEE-ECCEEEEEECCCCceEEccCCcccccCCcCCCCCCEEEEEECCeEEEEecCcccccCCCcEE
Confidence 56899999 55655544 4599999999998876655554555569999999999977899999999987 54221
Q ss_pred --eccCCcc-------------ceeeeeccCCCeEEEec---------------------------------CCCcEEEE
Q 022324 187 --PSREGTF-------------MKGLCMRYFDPEAVVGC---------------------------------EDGTARVF 218 (299)
Q Consensus 187 --~~~~~~~-------------~~~~~~~~~~~~l~s~~---------------------------------~d~~i~iw 218 (299)
....... ...++|+|++..|++++ .+..|.+|
T Consensus 161 ~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~ 240 (706)
T 2z3z_A 161 VTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIY 240 (706)
T ss_dssp SCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEE
T ss_pred eccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEE
Confidence 1111111 13568999999988876 44679999
Q ss_pred EcCCcceeeecc--ccCCceeEEEeCCC-CeEEEEeCCC-----cEEEEeCCCCceEEEeec-cCCC--CcEEEEEccC-
Q 022324 219 DMYSRKCSQIIR--MHCAPVTSLSLSED-QLIISGSSLG-----SIAISGLSSDQRVATLRS-TDCT--GHIICLMYPQ- 286 (299)
Q Consensus 219 d~~~~~~~~~~~--~~~~~i~~~~~~~~-~~l~~~~~dg-----~i~iwd~~~~~~~~~~~~-~~~~--~~i~~~~~s~- 286 (299)
|+.+++...... .+...+..++|+|| +.|++++.++ .|++||+.+++....+.. .... ..+.+++|+|
T Consensus 241 d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~ 320 (706)
T 2z3z_A 241 HLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPG 320 (706)
T ss_dssp ETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTT
T ss_pred ECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecC
Confidence 999887654432 45677999999999 8888877765 899999999844444432 2210 0246789999
Q ss_pred -CCCeEEeeec
Q 022324 287 -FLHMLFFLCF 296 (299)
Q Consensus 287 -~g~~l~s~s~ 296 (299)
+|++|++++.
T Consensus 321 ~dg~~l~~~~~ 331 (706)
T 2z3z_A 321 SNNQFIWQSRR 331 (706)
T ss_dssp CSSEEEEEECT
T ss_pred CCCEEEEEEcc
Confidence 9998887753
No 150
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.66 E-value=1.1e-15 Score=144.96 Aligned_cols=225 Identities=11% Similarity=0.103 Sum_probs=158.0
Q ss_pred hccCccchhhHHHhhhhHHHHhhhhhHHHHHHhhhcCCCCCCCchhhhhhhhhhhccccceeecCceeeEEeeccccCee
Q 022324 37 SSLGFFDLVRCSAVCKSWNAIINRCKLLQLLYCKLHGFSNTSGSSMRLHLEELAMKHHRFALEEGRIDIDQWKAHSVGVD 116 (299)
Q Consensus 37 ~~~~h~~~v~~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~h~~~i~ 116 (299)
.+.+|...+.++.|+++ ..+++ ...+...++|..+.. ....+.+..|. .+.
T Consensus 198 ~l~~~~~~v~~~~~s~d-~l~~~----------------~~~dg~~~l~~~~~~-----------g~~~~~l~~~~-~~~ 248 (1045)
T 1k32_A 198 KIVDMSTHVSSPVIVGH-RIYFI----------------TDIDGFGQIYSTDLD-----------GKDLRKHTSFT-DYY 248 (1045)
T ss_dssp EEECCSSCCEEEEEETT-EEEEE----------------ECTTSSCEEEEEETT-----------SCSCEECCCCC-SSC
T ss_pred ECcCCCCcccceEEeCC-EEEEE----------------EeccCceEEEEEeCC-----------CCcceEecCCC-Ccc
Confidence 33578888888888777 22222 113345566633111 11122334454 355
Q ss_pred EEEe-cCC-EEEEEeCCCcEEEEecCCceeEEEecCCC------------ceeEEEEe-cCCCEEEEEcCCeEEEEecCC
Q 022324 117 QCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEYSLPN------------AASLVDFD-FDESKIVGLIGTRICIWRRNG 181 (299)
Q Consensus 117 ~~~~-~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~------------~~~~~~~~-~~~~~l~~~~d~~i~v~d~~~ 181 (299)
...| +++ .|+.+ .++.|.+||....+ +..+..+. .+..++|+ |+++.++...++.+++|+..+
T Consensus 249 ~~~~SpDG~~la~~-~~~~i~~~d~~~~~-l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~~~~i~~~~~~~ 326 (1045)
T 1k32_A 249 PRHLNTDGRRILFS-KGGSIYIFNPDTEK-IEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVSRGQAFIQDVSG 326 (1045)
T ss_dssp EEEEEESSSCEEEE-ETTEEEEECTTTCC-EEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEETTEEEEECTTS
T ss_pred eeeEcCCCCEEEEE-eCCEEEEecCCceE-eeeeccCcccccccccccccccceeeecCCCCCEEEEEEcCEEEEEcCCC
Confidence 5677 676 67776 58999999995444 33554422 35569999 999999844589999999987
Q ss_pred cee-eeeccCCccceeeeeccCCCeEEEecCCCcEE-EEEcCCcceeeeccccCCceeEEEeCCC-CeEEEEeCCCcEEE
Q 022324 182 LRS-VFPSREGTFMKGLCMRYFDPEAVVGCEDGTAR-VFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGSSLGSIAI 258 (299)
Q Consensus 182 ~~~-~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~-iwd~~~~~~~~~~~~~~~~i~~~~~~~~-~~l~~~~~dg~i~i 258 (299)
... .+..+.+......+|+ ++..++.++.++.+. +||+..++.... ..+...+..++|+|+ ++|++++.++.|++
T Consensus 327 ~~~~~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~~l-~~~~~~~~~~~~SpDG~~la~~~~~~~v~~ 404 (1045)
T 1k32_A 327 TYVLKVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAEKF-EENLGNVFAMGVDRNGKFAVVANDRFEIMT 404 (1045)
T ss_dssp SBEEECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCCEEEC-CCCCCSEEEEEECTTSSEEEEEETTSEEEE
T ss_pred CceEEccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCCceEe-cCCccceeeeEECCCCCEEEEECCCCeEEE
Confidence 642 2333333123345777 777788888888888 899987765443 377788999999999 99999999999999
Q ss_pred EeCCCCceEEEeeccCCCCcEEEEEccCCCCeEEeeec
Q 022324 259 SGLSSDQRVATLRSTDCTGHIICLMYPQFLHMLFFLCF 296 (299)
Q Consensus 259 wd~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~s~s~ 296 (299)
||+.+++.......+.. .+.+++|+|||++|++++.
T Consensus 405 ~d~~tg~~~~~~~~~~~--~v~~~~~SpDG~~la~~~~ 440 (1045)
T 1k32_A 405 VDLETGKPTVIERSREA--MITDFTISDNSRFIAYGFP 440 (1045)
T ss_dssp EETTTCCEEEEEECSSS--CCCCEEECTTSCEEEEEEE
T ss_pred EECCCCceEEeccCCCC--CccceEECCCCCeEEEEec
Confidence 99999998877767776 8899999999999988764
No 151
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.66 E-value=1.4e-14 Score=120.16 Aligned_cols=172 Identities=12% Similarity=0.043 Sum_probs=125.5
Q ss_pred CeeEEEe-cCC-E-EEEEeCCCcEEEEecCCceeEEEecCCCc-------eeEEEEecCCCEEE-EEcC-----------
Q 022324 114 GVDQCRM-KRG-L-ILTGVGDKVMRLWSLEGYKCVEEYSLPNA-------ASLVDFDFDESKIV-GLIG----------- 171 (299)
Q Consensus 114 ~i~~~~~-~~~-~-l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-------~~~~~~~~~~~~l~-~~~d----------- 171 (299)
.+..+.+ +++ + ++++..++.|.+||+.+++.+..+..+.. +..++|+|+++.++ +..+
T Consensus 44 ~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~ 123 (349)
T 1jmx_B 44 GPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVK 123 (349)
T ss_dssp SSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEEC
T ss_pred CCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccC
Confidence 4667777 666 4 45666789999999999998887775432 44599999999988 6544
Q ss_pred -CeEEEEecCCcee-----eeeccCCccceeeeeccCCCeEEEecCCCcEEEEEcCCcceeeeccccC------------
Q 022324 172 -TRICIWRRNGLRS-----VFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHC------------ 233 (299)
Q Consensus 172 -~~i~v~d~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~------------ 233 (299)
+.|.+||+.+++. ...... . ...+++++++. +++++. .|.+||+.+++.+..+..+.
T Consensus 124 ~~~i~~~d~~~~~~~~~~~~~~~~~-~-~~~~~~s~dg~-l~~~~~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (349)
T 1jmx_B 124 PPRLEVFSTADGLEAKPVRTFPMPR-Q-VYLMRAADDGS-LYVAGP--DIYKMDVKTGKYTVALPLRNWNRKGYSAPDVL 198 (349)
T ss_dssp CCEEEEEEGGGGGGBCCSEEEECCS-S-CCCEEECTTSC-EEEESS--SEEEECTTTCCEEEEECSTTCCCTTBCCCBCC
T ss_pred CCeEEEEECCCccccceeeeccCCC-c-ccceeECCCCc-EEEccC--cEEEEeCCCCceeccccccccCCccccCccce
Confidence 8999999987431 122222 2 22457889988 666544 49999999887766553221
Q ss_pred --------------------------------------------------------CceeEEEeCC-C-CeEEEEeCCCc
Q 022324 234 --------------------------------------------------------APVTSLSLSE-D-QLIISGSSLGS 255 (299)
Q Consensus 234 --------------------------------------------------------~~i~~~~~~~-~-~~l~~~~~dg~ 255 (299)
..+..++++| + ++++++ ++.
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~ 276 (349)
T 1jmx_B 199 YFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNR 276 (349)
T ss_dssp CCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESE
T ss_pred eeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCe
Confidence 1345677789 8 777777 889
Q ss_pred EEEEeCCCCceEEEeeccCCCCcEEEEEccCCCCeEEeee
Q 022324 256 IAISGLSSDQRVATLRSTDCTGHIICLMYPQFLHMLFFLC 295 (299)
Q Consensus 256 i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~s~s 295 (299)
|.+||+.+++.+..+.... .+.+++|+|+|++|++++
T Consensus 277 v~~~d~~~~~~~~~~~~~~---~~~~~~~s~dg~~l~~~~ 313 (349)
T 1jmx_B 277 LAKYDLKQRKLIKAANLDH---TYYCVAFDKKGDKLYLGG 313 (349)
T ss_dssp EEEEETTTTEEEEEEECSS---CCCEEEECSSSSCEEEES
T ss_pred EEEEECccCeEEEEEcCCC---CccceEECCCCCEEEEec
Confidence 9999999999888887544 578999999999888764
No 152
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.65 E-value=6.5e-15 Score=139.72 Aligned_cols=179 Identities=15% Similarity=0.138 Sum_probs=141.3
Q ss_pred cccCeeEEEec--CC-EEEEEeCCCcEEEEecCCceeEEEecCCC--ceeEEEEecCCCEEE-EEcCCeEE-EEecCCce
Q 022324 111 HSVGVDQCRMK--RG-LILTGVGDKVMRLWSLEGYKCVEEYSLPN--AASLVDFDFDESKIV-GLIGTRIC-IWRRNGLR 183 (299)
Q Consensus 111 h~~~i~~~~~~--~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~-~~~d~~i~-v~d~~~~~ 183 (299)
|...+..+.|+ ++ +|++++ ++.+.+|+..+++... +..+. .+..++|+ +++.++ ++.++.+. +||..+..
T Consensus 294 ~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~ 370 (1045)
T 1k32_A 294 SIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVLK-VPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGK 370 (1045)
T ss_dssp ECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEEE-CSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCC
T ss_pred cccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceEE-ccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCC
Confidence 56678888885 55 777777 8899999998887654 44443 34458999 998888 77788888 99988764
Q ss_pred e-eeeccCCccceeeeeccCCCeEEEecCCCcEEEEEcCCcceeeeccccCCceeEEEeCCC-CeEEEEeCCC-------
Q 022324 184 S-VFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGSSLG------- 254 (299)
Q Consensus 184 ~-~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~-~~l~~~~~dg------- 254 (299)
. .+..+... ...++|+|++..+++++.++.|++||+.+++.......|...+..++|+|| ++|++++.++
T Consensus 371 ~~~l~~~~~~-~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~ 449 (1045)
T 1k32_A 371 AEKFEENLGN-VFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGY 449 (1045)
T ss_dssp EEECCCCCCS-EEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSC
T ss_pred ceEecCCccc-eeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCC
Confidence 2 22222222 335689999999999999999999999999887777678888999999999 8888887654
Q ss_pred ---cEEEEeCCCCceEEEeeccCCCCcEEEEEccCCCCeEEeeec
Q 022324 255 ---SIAISGLSSDQRVATLRSTDCTGHIICLMYPQFLHMLFFLCF 296 (299)
Q Consensus 255 ---~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~s~s~ 296 (299)
.|++||+.+++ +..+..+.. .+..++|+|||++|+.++.
T Consensus 450 ~~~~i~l~d~~~g~-~~~l~~~~~--~~~~~~~spdG~~l~~~s~ 491 (1045)
T 1k32_A 450 VMQAIHVYDMEGRK-IFAATTENS--HDYAPAFDADSKNLYYLSY 491 (1045)
T ss_dssp CEEEEEEEETTTTE-EEECSCSSS--BEEEEEECTTSCEEEEEES
T ss_pred CCCeEEEEECCCCc-EEEeeCCCc--ccCCceEcCCCCEEEEEec
Confidence 89999999887 666766666 7899999999999988764
No 153
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.65 E-value=1.6e-14 Score=119.89 Aligned_cols=148 Identities=9% Similarity=0.039 Sum_probs=110.6
Q ss_pred cCC-EEEEEeCCCcEEEEecCCceeEEEecCCC--ceeEEEEecCCCEEE--EEcCCeEEEEecCCceeeeecc--C---
Q 022324 121 KRG-LILTGVGDKVMRLWSLEGYKCVEEYSLPN--AASLVDFDFDESKIV--GLIGTRICIWRRNGLRSVFPSR--E--- 190 (299)
Q Consensus 121 ~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~--~~~d~~i~v~d~~~~~~~~~~~--~--- 190 (299)
+++ ++++++.++.|.+||..+++.+..+..+. ....++|+|+++.++ ...++.|.+||+.+.+...... .
T Consensus 9 ~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~ 88 (349)
T 1jmx_B 9 AGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPG 88 (349)
T ss_dssp TTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTT
T ss_pred CCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccccc
Confidence 344 88999999999999999999998888665 566799999998765 4468899999998876432221 1
Q ss_pred --CccceeeeeccCCCeEEEecCC------------CcEEEEEcCCccee---eeccccCCceeEEEeCCC-CeEEEEeC
Q 022324 191 --GTFMKGLCMRYFDPEAVVGCED------------GTARVFDMYSRKCS---QIIRMHCAPVTSLSLSED-QLIISGSS 252 (299)
Q Consensus 191 --~~~~~~~~~~~~~~~l~s~~~d------------~~i~iwd~~~~~~~---~~~~~~~~~i~~~~~~~~-~~l~~~~~ 252 (299)
+.....+++++++..+++++.+ +.|.+||+.+++.. ..+ .+...+.+++|+|+ + +++++.
T Consensus 89 ~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~~s~dg~-l~~~~~ 166 (349)
T 1jmx_B 89 EVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTF-PMPRQVYLMRAADDGS-LYVAGP 166 (349)
T ss_dssp EEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEE-ECCSSCCCEEECTTSC-EEEESS
T ss_pred cccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeec-cCCCcccceeECCCCc-EEEccC
Confidence 1112346899999998888755 89999999985543 333 23446889999999 7 555543
Q ss_pred CCcEEEEeCCCCceEEEeec
Q 022324 253 LGSIAISGLSSDQRVATLRS 272 (299)
Q Consensus 253 dg~i~iwd~~~~~~~~~~~~ 272 (299)
.|.+||+.+++.+..+..
T Consensus 167 --~i~~~d~~~~~~~~~~~~ 184 (349)
T 1jmx_B 167 --DIYKMDVKTGKYTVALPL 184 (349)
T ss_dssp --SEEEECTTTCCEEEEECS
T ss_pred --cEEEEeCCCCceeccccc
Confidence 499999999888776653
No 154
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.64 E-value=1.5e-15 Score=138.67 Aligned_cols=174 Identities=13% Similarity=-0.011 Sum_probs=126.4
Q ss_pred EEEe-cCCEEEEEeCCCcEEEEecCCceeEEEecCCCc----eeEEEEecCCCEEE-EEc---------CCeEEEEecCC
Q 022324 117 QCRM-KRGLILTGVGDKVMRLWSLEGYKCVEEYSLPNA----ASLVDFDFDESKIV-GLI---------GTRICIWRRNG 181 (299)
Q Consensus 117 ~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~-~~~---------d~~i~v~d~~~ 181 (299)
.+.| +++.++..+.|++|++||+.+++....+..+.. +..++|+|||+.|+ ++. ++.|++||+.+
T Consensus 20 ~~~~s~dg~~~~~~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~ 99 (719)
T 1z68_A 20 FPNWISGQEYLHQSADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSN 99 (719)
T ss_dssp CCEESSSSEEEEECTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTT
T ss_pred ccEECCCCeEEEEcCCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCC
Confidence 4566 666555566799999999999998877765533 66799999999998 554 68999999988
Q ss_pred ceeee-eccCCccceeeeeccCCCeEEEecCCCcEEEEEcCCcceeeecc-ccCCce-----------------eEEEeC
Q 022324 182 LRSVF-PSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIR-MHCAPV-----------------TSLSLS 242 (299)
Q Consensus 182 ~~~~~-~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~-~~~~~i-----------------~~~~~~ 242 (299)
++... ...... ....+|+|+++.|+.+. ++.|++||+.+++...... ++...| .+++|+
T Consensus 100 g~~~~~~~l~~~-~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wS 177 (719)
T 1z68_A 100 GEFVRGNELPRP-IQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWS 177 (719)
T ss_dssp TEECCSSCCCSS-BCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEEC
T ss_pred CccccceecCcc-cccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEEC
Confidence 76411 111122 22469999999988875 7899999998877654321 222222 489999
Q ss_pred CC-CeEEEEeCCC----------------------------------cEEEEeCCCCceE--EE------eeccCCCCcE
Q 022324 243 ED-QLIISGSSLG----------------------------------SIAISGLSSDQRV--AT------LRSTDCTGHI 279 (299)
Q Consensus 243 ~~-~~l~~~~~dg----------------------------------~i~iwd~~~~~~~--~~------~~~~~~~~~i 279 (299)
|| ++|++++.|. .|++||+.+++.. .. +..+.. .+
T Consensus 178 PDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~ 255 (719)
T 1z68_A 178 PNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDY--YF 255 (719)
T ss_dssp TTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCE--EE
T ss_pred CCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcc--eE
Confidence 99 8999887652 7889999887653 12 223444 78
Q ss_pred EEEEccCCCCeEEee
Q 022324 280 ICLMYPQFLHMLFFL 294 (299)
Q Consensus 280 ~~~~~s~~g~~l~s~ 294 (299)
.+++|+||++++++.
T Consensus 256 ~~~~~SpD~~~~~~~ 270 (719)
T 1z68_A 256 SWLTWVTDERVCLQW 270 (719)
T ss_dssp EEEEESSSSEEEEEE
T ss_pred EEeEEeCCCeEEEEE
Confidence 999999998877763
No 155
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.62 E-value=1.6e-15 Score=138.34 Aligned_cols=178 Identities=10% Similarity=-0.000 Sum_probs=125.9
Q ss_pred CeeEEEe-cCC-EEEEEeC---------CCcEEEEecCCceeEEEecCCCceeEEEEecCCCEEEEEcCCeEEEEecCCc
Q 022324 114 GVDQCRM-KRG-LILTGVG---------DKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIVGLIGTRICIWRRNGL 182 (299)
Q Consensus 114 ~i~~~~~-~~~-~l~s~~~---------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~i~v~d~~~~ 182 (299)
.|.++.| |++ +|++++. ++.|++||+.+++.+........+..++|+|||+.|+...++.|++||+.++
T Consensus 61 ~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l~~~~~~~~~SPDG~~la~~~~~~i~~~~~~~g 140 (719)
T 1z68_A 61 NASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNELPRPIQYLCWSPVGSKLAYVYQNNIYLKQRPGD 140 (719)
T ss_dssp TCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCCSSBCCEEECSSTTCEEEEETTEEEEESSTTS
T ss_pred ceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceecCcccccceECCCCCEEEEEECCeEEEEeCCCC
Confidence 3889999 677 7887776 7899999999988732122234455699999999999667899999999876
Q ss_pred eeeeeccCCcc-------------------ceeeeeccCCCeEEEecCCC------------------------------
Q 022324 183 RSVFPSREGTF-------------------MKGLCMRYFDPEAVVGCEDG------------------------------ 213 (299)
Q Consensus 183 ~~~~~~~~~~~-------------------~~~~~~~~~~~~l~s~~~d~------------------------------ 213 (299)
........+.. ...++|+|+++.|++++.|.
T Consensus 141 ~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~ 220 (719)
T 1z68_A 141 PPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAK 220 (719)
T ss_dssp CCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSC
T ss_pred CcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCC
Confidence 53221111110 12468999999988876542
Q ss_pred ----cEEEEEcCCccee--------eeccccCCceeEEEeCCC-CeEEEEeCC----CcEEEEe----CCCCceEEEe--
Q 022324 214 ----TARVFDMYSRKCS--------QIIRMHCAPVTSLSLSED-QLIISGSSL----GSIAISG----LSSDQRVATL-- 270 (299)
Q Consensus 214 ----~i~iwd~~~~~~~--------~~~~~~~~~i~~~~~~~~-~~l~~~~~d----g~i~iwd----~~~~~~~~~~-- 270 (299)
.|++||+.+++.. ..+..|...+..++|+|| +++++.... ..|.+|| +.++++...+
T Consensus 221 ~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~ 300 (719)
T 1z68_A 221 NPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEH 300 (719)
T ss_dssp CCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEE
T ss_pred CCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEec
Confidence 7889999987653 123357788999999999 666664432 2488999 8877765544
Q ss_pred --eccCCCCcEE-----EEEccCCCCeEEe
Q 022324 271 --RSTDCTGHII-----CLMYPQFLHMLFF 293 (299)
Q Consensus 271 --~~~~~~~~i~-----~~~~s~~g~~l~s 293 (299)
..+.. .+. .++|+|||+.|+.
T Consensus 301 ~~~~~~~--~~~~~~~~~~~~spdg~~l~~ 328 (719)
T 1z68_A 301 IEESRTG--WAGGFFVSTPVFSYDAISYYK 328 (719)
T ss_dssp EEECSSS--CSSSSSCCCCEECTTSSCEEE
T ss_pred ccccCCc--eEccccCCccEECCCCCeEEE
Confidence 34444 555 7899999996654
No 156
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.62 E-value=1.4e-14 Score=128.98 Aligned_cols=176 Identities=11% Similarity=0.017 Sum_probs=123.2
Q ss_pred cccCeeEEEe-cCC-EEEEEeC-CCcEEEEecCCceeEEEecCCC-ceeEEEEecCCCEEE-EEc---CCeEEE--Eec-
Q 022324 111 HSVGVDQCRM-KRG-LILTGVG-DKVMRLWSLEGYKCVEEYSLPN-AASLVDFDFDESKIV-GLI---GTRICI--WRR- 179 (299)
Q Consensus 111 h~~~i~~~~~-~~~-~l~s~~~-dg~i~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~-~~~---d~~i~v--~d~- 179 (299)
+..+|+++.+ +|+ +|++++. ||+++||++.+++.......+. .+..+.|+|+ +.++ +.. +....+ ++.
T Consensus 20 ~~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~ 98 (582)
T 3o4h_A 20 IAVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTS 98 (582)
T ss_dssp HHSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEEECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETT
T ss_pred hccchheeecCCCCCeEEEEEccCCceeEEEEcCCCcEeeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEecc
Confidence 3557999988 777 8888776 9999999998777665554553 4556999999 6666 443 344455 454
Q ss_pred -CCceeeeeccCCccceeeeeccCCCe-EEEecCCCcEEEEEcCCcceeeeccccCCceeEEEeCCC-CeEEEEeCC---
Q 022324 180 -NGLRSVFPSREGTFMKGLCMRYFDPE-AVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGSSL--- 253 (299)
Q Consensus 180 -~~~~~~~~~~~~~~~~~~~~~~~~~~-l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~-~~l~~~~~d--- 253 (299)
.+....+....+. ...+++++++. +++.+.++.+.+||+.+++...... +.. .+++|+|| ++|++++.+
T Consensus 99 ~~g~~~~l~~~~~~--~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~-~~~--~~~~~spDG~~la~~~~~~~~ 173 (582)
T 3o4h_A 99 RPGEEQRLEAVKPM--RILSGVDTGEAVVFTGATEDRVALYALDGGGLRELAR-LPG--FGFVSDIRGDLIAGLGFFGGG 173 (582)
T ss_dssp STTCCEECTTSCSB--EEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEE-ESS--CEEEEEEETTEEEEEEEEETT
T ss_pred CCCccccccCCCCc--eeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeec-CCC--ceEEECCCCCEEEEEEEcCCC
Confidence 3333322222222 25688999876 3333444555699999887655443 233 88999999 999988877
Q ss_pred -CcEEEEeCCCCceEEEeeccCCCCcEEEEEccCCCCeEEeee
Q 022324 254 -GSIAISGLSSDQRVATLRSTDCTGHIICLMYPQFLHMLFFLC 295 (299)
Q Consensus 254 -g~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~s~s 295 (299)
+.|++||+.+++.. .+..+.. .+..++|||||++|+++.
T Consensus 174 ~~~i~~~d~~~g~~~-~l~~~~~--~~~~~~~SpDG~~l~~~~ 213 (582)
T 3o4h_A 174 RVSLFTSNLSSGGLR-VFDSGEG--SFSSASISPGMKVTAGLE 213 (582)
T ss_dssp EEEEEEEETTTCCCE-EECCSSC--EEEEEEECTTSCEEEEEE
T ss_pred CeEEEEEcCCCCCce-EeecCCC--ccccceECCCCCEEEEcc
Confidence 78999999888754 5666666 899999999999999654
No 157
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.60 E-value=3.7e-13 Score=112.60 Aligned_cols=232 Identities=11% Similarity=0.045 Sum_probs=142.5
Q ss_pred ccchhhHHHhhhhHHHHhhhhhHHHHHHhhhcCCCCCCCchhhhhhhhhhhccccceeecCce-eeEEeeccccCeeEEE
Q 022324 41 FFDLVRCSAVCKSWNAIINRCKLLQLLYCKLHGFSNTSGSSMRLHLEELAMKHHRFALEEGRI-DIDQWKAHSVGVDQCR 119 (299)
Q Consensus 41 h~~~v~~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~g~~-~~~~~~~h~~~i~~~~ 119 (299)
+......++|+|+++.|+.... . ...+..+.+|.. . +. .|.. .+.....+......+.
T Consensus 48 ~~~~p~~l~~spdg~~l~~~~~--------~----~~~~~~v~~~~~--~--~~-----~g~~~~~~~~~~~~~~p~~~~ 106 (361)
T 3scy_A 48 EVANPSYLIPSADGKFVYSVNE--------F----SKDQAAVSAFAF--D--KE-----KGTLHLLNTQKTMGADPCYLT 106 (361)
T ss_dssp ECSCCCSEEECTTSSEEEEEEC--------C----SSTTCEEEEEEE--E--TT-----TTEEEEEEEEECSSSCEEEEE
T ss_pred cCCCCceEEECCCCCEEEEEEc--------c----CCCCCcEEEEEE--e--CC-----CCcEEEeeEeccCCCCcEEEE
Confidence 5566777889999987765100 0 001234444521 1 11 0111 1223334455566677
Q ss_pred ecCCEEEEEe-CCCcEEEEecCCceeEEE------ecCCC---------ceeEEEEecCCCEEE-EE-cCCeEEEEecCC
Q 022324 120 MKRGLILTGV-GDKVMRLWSLEGYKCVEE------YSLPN---------AASLVDFDFDESKIV-GL-IGTRICIWRRNG 181 (299)
Q Consensus 120 ~~~~~l~s~~-~dg~i~iwd~~~~~~~~~------~~~~~---------~~~~~~~~~~~~~l~-~~-~d~~i~v~d~~~ 181 (299)
+.+.+|++++ .++.|.+|++.....+.. ..... .+..++|+|++++++ +. .++.|.+|++..
T Consensus 107 ~dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~ 186 (361)
T 3scy_A 107 TNGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINP 186 (361)
T ss_dssp ECSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECT
T ss_pred ECCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcC
Confidence 7333566555 688999999875432211 11111 124499999999776 44 478999998874
Q ss_pred cee--------------eeeccCCccceeeeeccCCCeEEEec-CCCcEEEEEcCCcce--eeecc---ccCCceeEEEe
Q 022324 182 LRS--------------VFPSREGTFMKGLCMRYFDPEAVVGC-EDGTARVFDMYSRKC--SQIIR---MHCAPVTSLSL 241 (299)
Q Consensus 182 ~~~--------------~~~~~~~~~~~~~~~~~~~~~l~s~~-~d~~i~iwd~~~~~~--~~~~~---~~~~~i~~~~~ 241 (299)
... ......+.....+++++++..+++++ .++.|.+||+.+++. +..+. .+...+..++|
T Consensus 187 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~ 266 (361)
T 3scy_A 187 NANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHL 266 (361)
T ss_dssp TCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEE
T ss_pred CCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEE
Confidence 321 11222233333578999999876665 689999999987654 22222 23345689999
Q ss_pred CCC-CeEEEEeC--CCcEEEEeCC--CCc--eEEEeeccCCCCcEEEEEccCCCCeEEeeec
Q 022324 242 SED-QLIISGSS--LGSIAISGLS--SDQ--RVATLRSTDCTGHIICLMYPQFLHMLFFLCF 296 (299)
Q Consensus 242 ~~~-~~l~~~~~--dg~i~iwd~~--~~~--~~~~~~~~~~~~~i~~~~~s~~g~~l~s~s~ 296 (299)
+|+ ++|+++.. ++.|.+|++. +++ .+..+.. .. .+.+++|+|+|++|++++.
T Consensus 267 spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~--~~~~~~~spdg~~l~~~~~ 325 (361)
T 3scy_A 267 SPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-GI--HPRNFIITPNGKYLLVACR 325 (361)
T ss_dssp CTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-SS--CCCEEEECTTSCEEEEEET
T ss_pred CCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-CC--CCceEEECCCCCEEEEEEC
Confidence 999 87766655 4899999995 444 4445544 33 6889999999999988763
No 158
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.60 E-value=5.3e-14 Score=125.34 Aligned_cols=161 Identities=15% Similarity=0.032 Sum_probs=123.8
Q ss_pred EEEEEeCCCcEEEEecCCceeEEEecCCCceeEEEEecCCCEEE-EEcC----CeEEEEecCCce-eeeeccCCccceee
Q 022324 124 LILTGVGDKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIV-GLIG----TRICIWRRNGLR-SVFPSREGTFMKGL 197 (299)
Q Consensus 124 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~d----~~i~v~d~~~~~-~~~~~~~~~~~~~~ 197 (299)
.+++.+.++.+.+||+.+++.......+. ..++|+|||+.++ ++.+ +.|++||+.+++ ..+..+.+.. ...
T Consensus 124 ~~~~s~~~~~~~l~d~~~g~~~~l~~~~~--~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~~l~~~~~~~-~~~ 200 (582)
T 3o4h_A 124 VVFTGATEDRVALYALDGGGLRELARLPG--FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRVFDSGEGSF-SSA 200 (582)
T ss_dssp EEEEEECSSCEEEEEEETTEEEEEEEESS--CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCEEECCSSCEE-EEE
T ss_pred EEEEecCCCCceEEEccCCcEEEeecCCC--ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCceEeecCCCcc-ccc
Confidence 44444444555599999998766555444 6699999999999 6666 689999998765 3344444433 356
Q ss_pred eeccCCCeEEEecCCC--cEEEEEcCCcceeeeccccCCceeEEE--------eCCC-CeEEEEeCCCcEEEEeCCCCce
Q 022324 198 CMRYFDPEAVVGCEDG--TARVFDMYSRKCSQIIRMHCAPVTSLS--------LSED-QLIISGSSLGSIAISGLSSDQR 266 (299)
Q Consensus 198 ~~~~~~~~l~s~~~d~--~i~iwd~~~~~~~~~~~~~~~~i~~~~--------~~~~-~~l~~~~~dg~i~iwd~~~~~~ 266 (299)
+|+|+++.|+++..++ .|++||+.+++.. .+..+...+..++ |+|| .++++++.|+.+++|++ ++.
T Consensus 201 ~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~--g~~ 277 (582)
T 3o4h_A 201 SISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID--GER 277 (582)
T ss_dssp EECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET--TEE
T ss_pred eECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE--CCe
Confidence 9999999999888888 8999999988877 6667777777777 9999 89999999999999999 665
Q ss_pred EEEeeccCCCCcEEEEEccCCCCeEEeeec
Q 022324 267 VATLRSTDCTGHIICLMYPQFLHMLFFLCF 296 (299)
Q Consensus 267 ~~~~~~~~~~~~i~~~~~s~~g~~l~s~s~ 296 (299)
+. .... .+.+++|+ +|+++++++.
T Consensus 278 ~~---~~~~--~v~~~~~s-dg~~l~~~s~ 301 (582)
T 3o4h_A 278 VE---APQG--NHGRVVLW-RGKLVTSHTS 301 (582)
T ss_dssp EC---CCSS--EEEEEEEE-TTEEEEEEEE
T ss_pred ec---cCCC--ceEEEEec-CCEEEEEEcC
Confidence 54 2233 79999999 9998887664
No 159
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.58 E-value=1.1e-12 Score=109.11 Aligned_cols=186 Identities=11% Similarity=0.090 Sum_probs=121.3
Q ss_pred ccccCeeEEEe-cCCEEEEEeC---CCcEEEEecCCcee--EEEec-CCCceeEEEEecCCCEEE-EE-cCCeEEEEecC
Q 022324 110 AHSVGVDQCRM-KRGLILTGVG---DKVMRLWSLEGYKC--VEEYS-LPNAASLVDFDFDESKIV-GL-IGTRICIWRRN 180 (299)
Q Consensus 110 ~h~~~i~~~~~-~~~~l~s~~~---dg~i~iwd~~~~~~--~~~~~-~~~~~~~~~~~~~~~~l~-~~-~d~~i~v~d~~ 180 (299)
.+......++| +++.|++++. ++.|.+|++.+++. +..+. ....+..++|+|+++.|+ ++ .++.+.+|++.
T Consensus 37 ~~~~~p~~~a~spdg~l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~ 116 (347)
T 3hfq_A 37 AATQNPTYLALSAKDCLYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIA 116 (347)
T ss_dssp EECSCCCCEEECTTCEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEEC
T ss_pred eccCCcceEEEccCCeEEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeC
Confidence 44556677888 6665555443 68999999987763 33333 234556699999999887 65 67899999996
Q ss_pred Cc-e--eeeec-cCC---------ccceeeeeccCCCeEEEecCCCcEEEEEcC-Ccceee--eccc-cCCceeEEEeCC
Q 022324 181 GL-R--SVFPS-REG---------TFMKGLCMRYFDPEAVVGCEDGTARVFDMY-SRKCSQ--IIRM-HCAPVTSLSLSE 243 (299)
Q Consensus 181 ~~-~--~~~~~-~~~---------~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~-~~~~~~--~~~~-~~~~i~~~~~~~ 243 (299)
.. . ..... ..+ .....+++++++..+++...++.|.+||+. +++... .+.. ....+..++|+|
T Consensus 117 ~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~sp 196 (347)
T 3hfq_A 117 ADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSP 196 (347)
T ss_dssp TTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECT
T ss_pred CCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECC
Confidence 32 1 11111 111 112246899999866666678899999998 454322 2222 233578899999
Q ss_pred C-CeEEE-EeCCCcEEEEeCCC--Cce--EEEeeccCCC----CcEEEEEccCCCCeEEeee
Q 022324 244 D-QLIIS-GSSLGSIAISGLSS--DQR--VATLRSTDCT----GHIICLMYPQFLHMLFFLC 295 (299)
Q Consensus 244 ~-~~l~~-~~~dg~i~iwd~~~--~~~--~~~~~~~~~~----~~i~~~~~s~~g~~l~s~s 295 (299)
+ +++++ +..++.|.+|++.. ++. +..+...... ..+..++|+|+|++|++++
T Consensus 197 dg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~ 258 (347)
T 3hfq_A 197 DGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSN 258 (347)
T ss_dssp TSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEE
T ss_pred CCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEe
Confidence 9 75554 56788999999874 443 3333322210 1589999999999886544
No 160
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.55 E-value=4.9e-15 Score=135.65 Aligned_cols=177 Identities=12% Similarity=0.062 Sum_probs=118.6
Q ss_pred EEEe-cCC-EEEEEeCC---------CcEEEEecCCceeEEEecCCCceeEEEEecCCCEEEEEcCCeEEEEecCCceee
Q 022324 117 QCRM-KRG-LILTGVGD---------KVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIVGLIGTRICIWRRNGLRSV 185 (299)
Q Consensus 117 ~~~~-~~~-~l~s~~~d---------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~i~v~d~~~~~~~ 185 (299)
.+.| |++ +|+.++.+ +.+.+||+.+++..............+|+|||+.|+...++.|++|++.++...
T Consensus 66 ~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~~l~~~~~~~~~~~~SPdG~~la~~~~~~i~~~~~~~~~~~ 145 (740)
T 4a5s_A 66 DYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLITEERIPNNTQWVTWSPVGHKLAYVWNNDIYVKIEPNLPSY 145 (740)
T ss_dssp EEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCCTTEEEEEECSSTTCEEEEETTEEEEESSTTSCCE
T ss_pred ceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEEEcccCCCcceeeEECCCCCEEEEEECCeEEEEECCCCceE
Confidence 3667 677 78887776 567799999998664333345566699999999999667899999999876422
Q ss_pred eeccCCcc-------------------ceeeeeccCCCeEEEecCCC---------------------------------
Q 022324 186 FPSREGTF-------------------MKGLCMRYFDPEAVVGCEDG--------------------------------- 213 (299)
Q Consensus 186 ~~~~~~~~-------------------~~~~~~~~~~~~l~s~~~d~--------------------------------- 213 (299)
.-...+.. .....|+|+++.|+.++.|.
T Consensus 146 ~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~ 225 (740)
T 4a5s_A 146 RITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVN 225 (740)
T ss_dssp ECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCC
T ss_pred EEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcC
Confidence 21111111 11367999999987764221
Q ss_pred ---cEEEEEcCC---cc--eeeecc------ccCCceeEEEeCCC-CeEEEEeC----CCcEEEEeCCCCc----eE--E
Q 022324 214 ---TARVFDMYS---RK--CSQIIR------MHCAPVTSLSLSED-QLIISGSS----LGSIAISGLSSDQ----RV--A 268 (299)
Q Consensus 214 ---~i~iwd~~~---~~--~~~~~~------~~~~~i~~~~~~~~-~~l~~~~~----dg~i~iwd~~~~~----~~--~ 268 (299)
.|.+||+.+ ++ ....+. .+...+..++|+|| +.++.... +..|.+||+.+++ +. .
T Consensus 226 ~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~ 305 (740)
T 4a5s_A 226 PTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVAR 305 (740)
T ss_dssp CEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGG
T ss_pred CeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEE
Confidence 488899988 63 222232 26778999999999 65555432 3479999999887 22 2
Q ss_pred Ee--eccCCCCcE-----EEEEccCCCCeEE-eee
Q 022324 269 TL--RSTDCTGHI-----ICLMYPQFLHMLF-FLC 295 (299)
Q Consensus 269 ~~--~~~~~~~~i-----~~~~~s~~g~~l~-s~s 295 (299)
.+ ..+.. .| ...+|+|||+.|+ ..+
T Consensus 306 ~l~~~~~~~--~v~~~~~~~p~fspDG~~l~~~~s 338 (740)
T 4a5s_A 306 QHIEMSTTG--WVGRFRPSEPHFTLDGNSFYKIIS 338 (740)
T ss_dssp CEEEECSSS--CSSSSSCCCCEECTTSSEEEEEEE
T ss_pred EeeeccCCc--eEccCcCCCceEcCCCCEEEEEEE
Confidence 22 23332 33 3788999999877 544
No 161
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.53 E-value=7.9e-13 Score=121.06 Aligned_cols=174 Identities=7% Similarity=-0.069 Sum_probs=122.3
Q ss_pred CeeEEEe-cCC-EEEEEeCCCcEEEEecCCceeEEEecCCCce------eEEEEecCCCEEE-EEcC---------CeEE
Q 022324 114 GVDQCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNAA------SLVDFDFDESKIV-GLIG---------TRIC 175 (299)
Q Consensus 114 ~i~~~~~-~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~------~~~~~~~~~~~l~-~~~d---------~~i~ 175 (299)
....+.| +++ +++++ |++|++||+.++++...+..+... ..+.|+||++.|+ ++.+ +.++
T Consensus 18 ~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~ 95 (740)
T 4a5s_A 18 KLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYD 95 (740)
T ss_dssp CCCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEE
T ss_pred cccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEE
Confidence 3456788 677 66665 999999999999988777765421 1278899999998 5554 6778
Q ss_pred EEecCCceee-eeccCCccceeeeeccCCCeEEEecCCCcEEEEEcCCcceeeec-cccCCce-----------------
Q 022324 176 IWRRNGLRSV-FPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQII-RMHCAPV----------------- 236 (299)
Q Consensus 176 v~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~-~~~~~~i----------------- 236 (299)
+||+.+++.. +..+.+. ....+|+|+++.|+.+. ++.|++||+.+++..+.. .++...+
T Consensus 96 ~~d~~~~~~~~l~~~~~~-~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~ 173 (740)
T 4a5s_A 96 IYDLNKRQLITEERIPNN-TQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAY 173 (740)
T ss_dssp EEETTTTEECCSSCCCTT-EEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSS
T ss_pred EEECCCCcEEEcccCCCc-ceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCC
Confidence 9999988633 2222333 33568999999988874 689999999887754422 2222222
Q ss_pred eEEEeCCC-CeEEEEeCCC------------------------------------cEEEEeCCC---Cc--eEEEeec--
Q 022324 237 TSLSLSED-QLIISGSSLG------------------------------------SIAISGLSS---DQ--RVATLRS-- 272 (299)
Q Consensus 237 ~~~~~~~~-~~l~~~~~dg------------------------------------~i~iwd~~~---~~--~~~~~~~-- 272 (299)
..+.|+|| +.||.++.|. .|++||+.+ ++ ....+..
T Consensus 174 ~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~ 253 (740)
T 4a5s_A 174 SALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPA 253 (740)
T ss_dssp BCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCH
T ss_pred cceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCc
Confidence 34899999 8888875322 488899988 73 2333432
Q ss_pred ----cCCCCcEEEEEccCCCCeEEe
Q 022324 273 ----TDCTGHIICLMYPQFLHMLFF 293 (299)
Q Consensus 273 ----~~~~~~i~~~~~s~~g~~l~s 293 (299)
+.. .+..++|+|||+.++.
T Consensus 254 ~~~~~~~--~~~~~~wspdg~~~~~ 276 (740)
T 4a5s_A 254 SMLIGDH--YLCDVTWATQERISLQ 276 (740)
T ss_dssp HHHTSCE--EEEEEEEEETTEEEEE
T ss_pred cCCCCCe--EEEEEEEeCCCeEEEE
Confidence 444 7999999999996654
No 162
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.51 E-value=2e-12 Score=108.42 Aligned_cols=183 Identities=7% Similarity=-0.038 Sum_probs=123.1
Q ss_pred ccCeeEEEe-cCC-EEEEEeCCCcEEEEecC-CceeEEEec--CCCceeEEEEecCCCE--EE-EE-------------c
Q 022324 112 SVGVDQCRM-KRG-LILTGVGDKVMRLWSLE-GYKCVEEYS--LPNAASLVDFDFDESK--IV-GL-------------I 170 (299)
Q Consensus 112 ~~~i~~~~~-~~~-~l~s~~~dg~i~iwd~~-~~~~~~~~~--~~~~~~~~~~~~~~~~--l~-~~-------------~ 170 (299)
...+..+++ +++ +|++++.+ .|.+|++. +++...... .+.....++++|+++. ++ +. .
T Consensus 39 ~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~ 117 (365)
T 1jof_A 39 DEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKF 117 (365)
T ss_dssp TCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSS
T ss_pred CCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccceeecC
Confidence 346777888 666 78888888 99999997 787654333 2233445889999995 33 32 5
Q ss_pred CCeEEEEecCC-cee--eeec---cCCccceeeeeccCCCeEEEec-CCCcEEEEEcC-Cccee--eecc--ccCCceeE
Q 022324 171 GTRICIWRRNG-LRS--VFPS---REGTFMKGLCMRYFDPEAVVGC-EDGTARVFDMY-SRKCS--QIIR--MHCAPVTS 238 (299)
Q Consensus 171 d~~i~v~d~~~-~~~--~~~~---~~~~~~~~~~~~~~~~~l~s~~-~d~~i~iwd~~-~~~~~--~~~~--~~~~~i~~ 238 (299)
++.+.+|++.. +.. .... ........++++|+++.+++++ .++.|.+||+. +++.. ..+. .+...+..
T Consensus 118 ~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~ 197 (365)
T 1jof_A 118 AGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRW 197 (365)
T ss_dssp CCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEE
T ss_pred CceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCE
Confidence 88999999974 321 1221 1222333568999999877654 46899999998 67643 2332 23566899
Q ss_pred EEeCCC-CeEEEEeC-CCcEEEEeCC--CCceE---EEeeccC----CCC-------cEEEEE-ccCCCCeEEeee
Q 022324 239 LSLSED-QLIISGSS-LGSIAISGLS--SDQRV---ATLRSTD----CTG-------HIICLM-YPQFLHMLFFLC 295 (299)
Q Consensus 239 ~~~~~~-~~l~~~~~-dg~i~iwd~~--~~~~~---~~~~~~~----~~~-------~i~~~~-~s~~g~~l~s~s 295 (299)
++|+|+ +++++++. ++.|.+|++. +++.. ..+.... +.. .+..++ |+|||++|++++
T Consensus 198 ~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~ 273 (365)
T 1jof_A 198 VAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASS 273 (365)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEE
T ss_pred eEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEEC
Confidence 999999 78877765 7899999765 56543 2232211 101 378999 999999988765
No 163
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.50 E-value=9.6e-12 Score=102.73 Aligned_cols=178 Identities=11% Similarity=0.018 Sum_probs=128.9
Q ss_pred CeeEEEecCC-EEEEEeCCCcEEEEecCCceeEEEecCCCceeEEEEecCCCEEEEE-cCCeEEEEecCCceeeeeccCC
Q 022324 114 GVDQCRMKRG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIVGL-IGTRICIWRRNGLRSVFPSREG 191 (299)
Q Consensus 114 ~i~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~~~~~ 191 (299)
....+.+.++ +.++...++.|.+||..+++.+.++.....+..++++++++..++. .++.|.+||..+.+.......+
T Consensus 45 ~~~~i~~~~~~lyv~~~~~~~v~viD~~t~~~~~~i~~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g 124 (328)
T 3dsm_A 45 VAQSMVIRDGIGWIVVNNSHVIFAIDINTFKEVGRITGFTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECP 124 (328)
T ss_dssp CEEEEEEETTEEEEEEGGGTEEEEEETTTCCEEEEEECCSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECT
T ss_pred cceEEEEECCEEEEEEcCCCEEEEEECcccEEEEEcCCCCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcC
Confidence 3456777666 5566666899999999999999988766667779998988544455 6899999999987633221111
Q ss_pred c------cceeeeeccCCCeEEEec--CCCcEEEEEcCCcceeeeccccCCceeEEEeCCC-CeEEEEeCC---------
Q 022324 192 T------FMKGLCMRYFDPEAVVGC--EDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGSSL--------- 253 (299)
Q Consensus 192 ~------~~~~~~~~~~~~~l~s~~--~d~~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~-~~l~~~~~d--------- 253 (299)
. ....+++ .+..++.+. .++.|.++|+.+++.+..+.. ......++++|+ ++++++..+
T Consensus 125 ~~~~~~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~-g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~ 201 (328)
T 3dsm_A 125 DMDMESGSTEQMVQ--YGKYVYVNCWSYQNRILKIDTETDKVVDELTI-GIQPTSLVMDKYNKMWTITDGGYEGSPYGYE 201 (328)
T ss_dssp TCCTTTCBCCCEEE--ETTEEEEEECTTCCEEEEEETTTTEEEEEEEC-SSCBCCCEECTTSEEEEEBCCBCTTCSSCBC
T ss_pred CccccCCCcceEEE--ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEc-CCCccceEEcCCCCEEEEECCCccCCccccC
Confidence 1 1222344 456655554 488999999999988877754 334678899998 766666554
Q ss_pred -CcEEEEeCCCCceEEEeeccCCCCcEEEEEccCCCCeEEeee
Q 022324 254 -GSIAISGLSSDQRVATLRSTDCTGHIICLMYPQFLHMLFFLC 295 (299)
Q Consensus 254 -g~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~s~s 295 (299)
+.|.++|..+++....+....+. ....++|+|++++|+++.
T Consensus 202 ~~~v~~id~~t~~v~~~~~~~~g~-~p~~la~~~d~~~lyv~~ 243 (328)
T 3dsm_A 202 APSLYRIDAETFTVEKQFKFKLGD-WPSEVQLNGTRDTLYWIN 243 (328)
T ss_dssp CCEEEEEETTTTEEEEEEECCTTC-CCEEEEECTTSCEEEEES
T ss_pred CceEEEEECCCCeEEEEEecCCCC-CceeEEEecCCCEEEEEc
Confidence 78999999999888777654322 689999999999887653
No 164
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.49 E-value=4.9e-12 Score=106.60 Aligned_cols=190 Identities=8% Similarity=-0.034 Sum_probs=130.0
Q ss_pred eeEEeeccccCeeE-----EEe-cCC-EEEEEeC-CC--cEEEEecCCceeEEEecCCCcee-EEEEecCCCEEE-EEcC
Q 022324 104 DIDQWKAHSVGVDQ-----CRM-KRG-LILTGVG-DK--VMRLWSLEGYKCVEEYSLPNAAS-LVDFDFDESKIV-GLIG 171 (299)
Q Consensus 104 ~~~~~~~h~~~i~~-----~~~-~~~-~l~s~~~-dg--~i~iwd~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~-~~~d 171 (299)
.+..+..|...... ..| |++ +|+.++. +| .|.+||+.+++.......+.... ...|+|+++.|+ +..+
T Consensus 22 ~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~ 101 (388)
T 3pe7_A 22 QVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDG 101 (388)
T ss_dssp EEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETT
T ss_pred ceEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCC
Confidence 34555666655554 567 667 7777776 67 48888999998887776665554 478999999999 7888
Q ss_pred CeEEEEecCCcee--eeeccCCccce-eeeeccCCCeEEE----------------------ecCCCcEEEEEcCCccee
Q 022324 172 TRICIWRRNGLRS--VFPSREGTFMK-GLCMRYFDPEAVV----------------------GCEDGTARVFDMYSRKCS 226 (299)
Q Consensus 172 ~~i~v~d~~~~~~--~~~~~~~~~~~-~~~~~~~~~~l~s----------------------~~~d~~i~iwd~~~~~~~ 226 (299)
+.+++||+.+++. +...+.+.... ...+++++..++. ...+..|.+||+.+++..
T Consensus 102 ~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~ 181 (388)
T 3pe7_A 102 RNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGEST 181 (388)
T ss_dssp TEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEE
T ss_pred CeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceE
Confidence 8999999998752 23333322211 1234666766553 234577999999988654
Q ss_pred eeccccCCceeEEEeCC-C-CeEEEEeCC------CcEEEEeCCCCceEEEeeccCCCCcEEEEEccCCCCeEEeee
Q 022324 227 QIIRMHCAPVTSLSLSE-D-QLIISGSSL------GSIAISGLSSDQRVATLRSTDCTGHIICLMYPQFLHMLFFLC 295 (299)
Q Consensus 227 ~~~~~~~~~i~~~~~~~-~-~~l~~~~~d------g~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~s~s 295 (299)
... .+...+..++|+| + +.|+....+ ..|.++|+..++ ...+..+.....+..++|+|||+.|+..+
T Consensus 182 ~l~-~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~-~~~l~~~~~~~~~~~~~~spdg~~l~~~~ 256 (388)
T 3pe7_A 182 VIL-QENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTN-MRKVKTHAEGESCTHEFWVPDGSALVYVS 256 (388)
T ss_dssp EEE-EESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCC-CEESCCCCTTEEEEEEEECTTSSCEEEEE
T ss_pred Eee-cCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCc-eEEeeeCCCCcccccceECCCCCEEEEEe
Confidence 443 5667789999999 8 777776653 378888886554 34444433211578899999999887654
No 165
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.49 E-value=5.6e-12 Score=105.55 Aligned_cols=178 Identities=17% Similarity=0.162 Sum_probs=125.7
Q ss_pred eEEeeccccCeeEEEe-cCC-EEEEEe----------CCCcEEEEecCCceeEEEecCC-------CceeEEEEecCCCE
Q 022324 105 IDQWKAHSVGVDQCRM-KRG-LILTGV----------GDKVMRLWSLEGYKCVEEYSLP-------NAASLVDFDFDESK 165 (299)
Q Consensus 105 ~~~~~~h~~~i~~~~~-~~~-~l~s~~----------~dg~i~iwd~~~~~~~~~~~~~-------~~~~~~~~~~~~~~ 165 (299)
+..+..+..+ .+.+ +++ +++++. .++.|.+||..+++.+..+... .....++++|++++
T Consensus 44 ~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~ 121 (361)
T 2oiz_A 44 LGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKF 121 (361)
T ss_dssp EEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSE
T ss_pred EEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCE
Confidence 3444555555 6777 666 777665 3678999999999998887643 23445999999999
Q ss_pred EE-EEc--CCeEEEEecCCceeeee-cc--------------------------------C-Cccc--------------
Q 022324 166 IV-GLI--GTRICIWRRNGLRSVFP-SR--------------------------------E-GTFM-------------- 194 (299)
Q Consensus 166 l~-~~~--d~~i~v~d~~~~~~~~~-~~--------------------------------~-~~~~-------------- 194 (299)
|+ +.. ++.|.+||+.+.+.+.. .. . +...
T Consensus 122 l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~ 201 (361)
T 2oiz_A 122 IVLQNASPATSIGIVDVAKGDYVEDVTAAAGCWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDD 201 (361)
T ss_dssp EEEEEESSSEEEEEEETTTTEEEEEEGGGTTEEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTS
T ss_pred EEEECCCCCCeEEEEECCCCcEEEEEecCCCcceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCC
Confidence 88 543 57899999876542211 00 0 0000
Q ss_pred ----------------------------------------------------e---eeeeccCCCeEEEecC--------
Q 022324 195 ----------------------------------------------------K---GLCMRYFDPEAVVGCE-------- 211 (299)
Q Consensus 195 ----------------------------------------------------~---~~~~~~~~~~l~s~~~-------- 211 (299)
. .+++++++..++++..
T Consensus 202 ~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~ 281 (361)
T 2oiz_A 202 PIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTH 281 (361)
T ss_dssp CBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCT
T ss_pred ceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccc
Confidence 0 0233444455444322
Q ss_pred ---CCcEEEEEcCCcceeeeccccCCceeEEEeCCC-CeEEEEeCCCcEEEEeCCCC--ceEEEeeccCCCCcEEEEEcc
Q 022324 212 ---DGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGSSLGSIAISGLSSD--QRVATLRSTDCTGHIICLMYP 285 (299)
Q Consensus 212 ---d~~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~-~~l~~~~~dg~i~iwd~~~~--~~~~~~~~~~~~~~i~~~~~s 285 (299)
.+.|.+||+.+++.+..+..+. +.+++|+|+ ++|++++. +.|.+||..++ +.+.++..... ....++++
T Consensus 282 ~~~~~~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l~~~~~i~~~G~--~P~~~~~~ 356 (361)
T 2oiz_A 282 KFPAAEIWVMDTKTKQRVARIPGRD--ALSMTIDQQRNLMLTLDG-GNVNVYDISQPEPKLLRTIEGAAE--ASLQVQFH 356 (361)
T ss_dssp TCCCSEEEEEETTTTEEEEEEECTT--CCEEEEETTTTEEEEECS-SCEEEEECSSSSCEEEEEETTSCS--SEEEEEEC
T ss_pred cCCCceEEEEECCCCcEEEEEecCC--eeEEEECCCCCEEEEeCC-CeEEEEECCCCcceeeEEeccCCC--CcEEEEec
Confidence 3479999999999999887665 999999999 88888886 99999999999 99988855544 68899999
Q ss_pred CCCC
Q 022324 286 QFLH 289 (299)
Q Consensus 286 ~~g~ 289 (299)
|+|.
T Consensus 357 p~G~ 360 (361)
T 2oiz_A 357 PVGG 360 (361)
T ss_dssp CCSC
T ss_pred CCCC
Confidence 9985
No 166
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.48 E-value=7e-12 Score=104.77 Aligned_cols=171 Identities=8% Similarity=0.071 Sum_probs=112.8
Q ss_pred cCeeEEEe-cCC-EEEEE-eCCCcEEEEecCCce-------e-------EEEecCCCceeEEEEecCCCEEE-EE-cCCe
Q 022324 113 VGVDQCRM-KRG-LILTG-VGDKVMRLWSLEGYK-------C-------VEEYSLPNAASLVDFDFDESKIV-GL-IGTR 173 (299)
Q Consensus 113 ~~i~~~~~-~~~-~l~s~-~~dg~i~iwd~~~~~-------~-------~~~~~~~~~~~~~~~~~~~~~l~-~~-~d~~ 173 (299)
..+.++.| |++ +++++ ..++.|.+|++.... . ............++|+|++++++ +. .++.
T Consensus 155 ~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~ 234 (361)
T 3scy_A 155 PHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGT 234 (361)
T ss_dssp CCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCE
T ss_pred CcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCe
Confidence 34577888 666 55554 458999999887433 1 22233344556699999999877 55 5889
Q ss_pred EEEEecCCcee--e--eeccCC--ccceeeeeccCCCeEEEecC--CCcEEEEEcC--Ccc--eeeeccccCCceeEEEe
Q 022324 174 ICIWRRNGLRS--V--FPSREG--TFMKGLCMRYFDPEAVVGCE--DGTARVFDMY--SRK--CSQIIRMHCAPVTSLSL 241 (299)
Q Consensus 174 i~v~d~~~~~~--~--~~~~~~--~~~~~~~~~~~~~~l~s~~~--d~~i~iwd~~--~~~--~~~~~~~~~~~i~~~~~ 241 (299)
|.+|++.++.. . ...... .....+++++++++++++.. ++.|.+|++. +++ .+..+.. ...+..++|
T Consensus 235 v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~ 313 (361)
T 3scy_A 235 VIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-GIHPRNFII 313 (361)
T ss_dssp EEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-SSCCCEEEE
T ss_pred EEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-CCCCceEEE
Confidence 99999986532 1 111111 11235689999998766554 5899999986 344 3444433 556889999
Q ss_pred CCC-CeEEEEe-CCCcEEEE--eCCCCceEEEeeccCCCCcEEEEEcc
Q 022324 242 SED-QLIISGS-SLGSIAIS--GLSSDQRVATLRSTDCTGHIICLMYP 285 (299)
Q Consensus 242 ~~~-~~l~~~~-~dg~i~iw--d~~~~~~~~~~~~~~~~~~i~~~~~s 285 (299)
+|+ ++|++++ .++.|.+| |..+++........... .+.|++|.
T Consensus 314 spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~~~-~p~~v~~~ 360 (361)
T 3scy_A 314 TPNGKYLLVACRDTNVIQIFERDQATGLLTDIKKDIKVD-KPVCLKFV 360 (361)
T ss_dssp CTTSCEEEEEETTTTEEEEEEECTTTCCEEECSCCEECS-SEEEEEEE
T ss_pred CCCCCEEEEEECCCCCEEEEEEECCCCcEeecceeeeCC-CCeEEEEc
Confidence 999 8777777 67899995 55567655443222222 68888885
No 167
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.48 E-value=5.1e-12 Score=101.66 Aligned_cols=169 Identities=11% Similarity=0.056 Sum_probs=127.5
Q ss_pred cCCEEEEEeCCCcEEEEecCCceeEEEecCCC--ceeEEEEecCCCEEEEEcCCeEEEEecCCceeeeeccC--Ccccee
Q 022324 121 KRGLILTGVGDKVMRLWSLEGYKCVEEYSLPN--AASLVDFDFDESKIVGLIGTRICIWRRNGLRSVFPSRE--GTFMKG 196 (299)
Q Consensus 121 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~d~~i~v~d~~~~~~~~~~~~--~~~~~~ 196 (299)
|+++|++++.|+.|.+||.++++.+.++..+. ....+.+.|++++++ +.++.|+.||. +++.+..... ......
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv-s~~~~V~~~d~-~G~~~W~~~~~~~~~~~~ 81 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF-SYSKGAKMITR-DGRELWNIAAPAGCEMQT 81 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE-ECBSEEEEECT-TSCEEEEEECCTTCEEEE
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE-eCCCCEEEECC-CCCEEEEEcCCCCccccc
Confidence 34489999999999999999999999998765 455699999999888 66889999999 5543333222 122223
Q ss_pred eeeccCCCeEEEecC-CCcEEEEEcCCcceeeeccc------cCCceeEEEeCCC-CeEEEEeCCCcEEEEeCCCCceEE
Q 022324 197 LCMRYFDPEAVVGCE-DGTARVFDMYSRKCSQIIRM------HCAPVTSLSLSED-QLIISGSSLGSIAISGLSSDQRVA 268 (299)
Q Consensus 197 ~~~~~~~~~l~s~~~-d~~i~iwd~~~~~~~~~~~~------~~~~i~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~ 268 (299)
..+.+++..+++.+. ++.+..+|. +++.+..+.. +......+++.++ +++++...++.|..||.. |+.+.
T Consensus 82 ~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~w 159 (276)
T 3no2_A 82 ARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQLLN 159 (276)
T ss_dssp EEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCEEE
T ss_pred cEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CCEEE
Confidence 467788888888776 778888886 6777766641 2223455667788 899999999999999997 99999
Q ss_pred EeeccCCCCcEEEEEccCCCCeEEeeec
Q 022324 269 TLRSTDCTGHIICLMYPQFLHMLFFLCF 296 (299)
Q Consensus 269 ~~~~~~~~~~i~~~~~s~~g~~l~s~s~ 296 (299)
++.... .+.++.+.++|..+++++.
T Consensus 160 ~~~~~~---~~~~~~~~~~g~~~v~~~~ 184 (276)
T 3no2_A 160 SVKLSG---TPFSSAFLDNGDCLVACGD 184 (276)
T ss_dssp EEECSS---CCCEEEECTTSCEEEECBT
T ss_pred EEECCC---CccceeEcCCCCEEEEeCC
Confidence 987754 4667788899998887653
No 168
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.46 E-value=7.3e-11 Score=95.27 Aligned_cols=182 Identities=12% Similarity=0.126 Sum_probs=127.9
Q ss_pred ccccCeeEEEe-c-CCEEEEEeC--CCcEEEEecCCceeEEEecCC--CceeEEEEecCCCEEE-EEcCCeEEEEecCCc
Q 022324 110 AHSVGVDQCRM-K-RGLILTGVG--DKVMRLWSLEGYKCVEEYSLP--NAASLVDFDFDESKIV-GLIGTRICIWRRNGL 182 (299)
Q Consensus 110 ~h~~~i~~~~~-~-~~~l~s~~~--dg~i~iwd~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~-~~~d~~i~v~d~~~~ 182 (299)
+|...+..+++ + ++.++.+.. ++.|.+|| .+++.+..+... ..+..+++++++++++ ...++.|.+||....
T Consensus 74 ~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~ 152 (286)
T 1q7f_A 74 SQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYN-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGN 152 (286)
T ss_dssp TCBSSEEEEEEETTTTEEEEEECGGGCEEEEEC-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTSC
T ss_pred ccccCceEEEEEcCCCeEEEEcCCCCCEEEEEC-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCCCC
Confidence 34557788888 3 455555543 89999999 567777766532 3455699999998777 456789999997654
Q ss_pred ee-eeec-cCCccceeeeeccCCCeEEEecCCCcEEEEEcCCcceeeecccc--CCceeEEEeCCC-CeEEEEeCCC-cE
Q 022324 183 RS-VFPS-REGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMH--CAPVTSLSLSED-QLIISGSSLG-SI 256 (299)
Q Consensus 183 ~~-~~~~-~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~--~~~i~~~~~~~~-~~l~~~~~dg-~i 256 (299)
.. .+.. ........+++.+++..+++...++.|.+||.. ++.+..+... ...+..++++++ +++++...++ .|
T Consensus 153 ~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i 231 (286)
T 1q7f_A 153 VLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYE-GQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNL 231 (286)
T ss_dssp EEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETT-CCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEE
T ss_pred EEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcCC-CCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEE
Confidence 32 2221 111223356788877767777778999999975 5666666432 356899999998 8788877775 99
Q ss_pred EEEeCCCCceEEEeeccCCCCcEEEEEccCCCCeEEee
Q 022324 257 AISGLSSDQRVATLRSTDCTGHIICLMYPQFLHMLFFL 294 (299)
Q Consensus 257 ~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~s~ 294 (299)
.+||. +++.+..+..+.....+.+++++|+|+++++.
T Consensus 232 ~~~~~-~g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs~ 268 (286)
T 1q7f_A 232 TIFTQ-DGQLISALESKVKHAQCFDVALMDDGSVVLAS 268 (286)
T ss_dssp EEECT-TSCEEEEEEESSCCSCEEEEEEETTTEEEEEE
T ss_pred EEECC-CCCEEEEEcccCCCCcceeEEECCCCcEEEEC
Confidence 99996 57777777665432258899999999877763
No 169
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.44 E-value=4.3e-12 Score=106.05 Aligned_cols=166 Identities=12% Similarity=0.116 Sum_probs=121.1
Q ss_pred CeeEEEec--CCEEEEEeCCCcEEEEecCCce-----------eEEEecCCCceeEEEEecCCCEEEEEcCCeEEEEecC
Q 022324 114 GVDQCRMK--RGLILTGVGDKVMRLWSLEGYK-----------CVEEYSLPNAASLVDFDFDESKIVGLIGTRICIWRRN 180 (299)
Q Consensus 114 ~i~~~~~~--~~~l~s~~~dg~i~iwd~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~i~v~d~~ 180 (299)
+++.+++. .+++++|+.++ +.+|++++.. .......+. +..++| +++.|+.+.++.|++||+.
T Consensus 39 ~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~~~~~l~v~dv~ 114 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVSTRNALYSLDLE 114 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEEESSEEEEEESS
T ss_pred cccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEEcCCcEEEEEch
Confidence 57778883 33899999875 4559865433 223344455 666999 8899984499999999987
Q ss_pred Cce--eeeeccCCccceeeeeccCCCeEEEecCCCcEEEEEcCCcceeeeccccCCceeEEEeCCCCeEEEEeCCCcEEE
Q 022324 181 GLR--SVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSEDQLIISGSSLGSIAI 258 (299)
Q Consensus 181 ~~~--~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~i 258 (299)
+.. .....+.... ..+.+..+.++++..||.+.+||+.++.... +...|++++|+|+. ++.|..||++++
T Consensus 115 sl~~~~~~~~~~~~v---~~i~~~~p~~av~~~dG~L~v~dl~~~~~~~----~~~~Vs~v~WSpkG-~~vg~~dg~i~~ 186 (388)
T 1xip_A 115 ELSEFRTVTSFEKPV---FQLKNVNNTLVILNSVNDLSALDLRTKSTKQ----LAQNVTSFDVTNSQ-LAVLLKDRSFQS 186 (388)
T ss_dssp STTCEEEEEECSSCE---EEEEECSSEEEEEETTSEEEEEETTTCCEEE----EEESEEEEEECSSE-EEEEETTSCEEE
T ss_pred hhhccCccceeecce---eeEEecCCCEEEEECCCCEEEEEccCCcccc----ccCCceEEEEcCCc-eEEEEcCCcEEE
Confidence 653 2233333333 2444555568999999999999999877643 34579999999997 678999999999
Q ss_pred EeCCCCce--EEEe------e---ccCCCCcEEEEEccCCCCeEEe
Q 022324 259 SGLSSDQR--VATL------R---STDCTGHIICLMYPQFLHMLFF 293 (299)
Q Consensus 259 wd~~~~~~--~~~~------~---~~~~~~~i~~~~~s~~g~~l~s 293 (299)
|+...++. ..++ . .+.. .|.++.|.+++.+|++
T Consensus 187 ~~~~~~~~~~k~~I~~Pp~~~~~~~~~~--~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 187 FAWRNGEMEKQFEFSLPSELEELPVEEY--SPLSVTILSPQDFLAV 230 (388)
T ss_dssp EEEETTEEEEEEEECCCHHHHTSCTTTS--EEEEEEESSSSEEEEE
T ss_pred EcCCCccccccceecCCcccccccCCCe--eEEEEEEecCCeEEEE
Confidence 99887765 5566 2 2333 8999999999999875
No 170
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.43 E-value=6.3e-14 Score=118.24 Aligned_cols=184 Identities=10% Similarity=-0.045 Sum_probs=116.8
Q ss_pred eccccCeeEEEe-cCC-EEEEEeCCCcEEEEecCCceeEEEecCCCceeE---EEEecCCCEEEEE--------------
Q 022324 109 KAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNAASL---VDFDFDESKIVGL-------------- 169 (299)
Q Consensus 109 ~~h~~~i~~~~~-~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~-------------- 169 (299)
.++...+..+.| +++ .|+.++.++.|++||+.+++....+..+..... ..++++++.+++.
T Consensus 77 ~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~ 156 (388)
T 3pe7_A 77 EGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWK 156 (388)
T ss_dssp CSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHH
T ss_pred eCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccc
Confidence 456556555667 677 899999999999999999988777766655432 3458999988732
Q ss_pred ---------cCCeEEEEecCCcee-eeeccCCccceeeeecc-CCCeEEEecCC------CcEEEEEcCCcceeeecccc
Q 022324 170 ---------IGTRICIWRRNGLRS-VFPSREGTFMKGLCMRY-FDPEAVVGCED------GTARVFDMYSRKCSQIIRMH 232 (299)
Q Consensus 170 ---------~d~~i~v~d~~~~~~-~~~~~~~~~~~~~~~~~-~~~~l~s~~~d------~~i~iwd~~~~~~~~~~~~~ 232 (299)
.+..|++||+.+++. .+....... ....++| ++..++....+ ..|.++|...++. ..+..+
T Consensus 157 ~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~-~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~ 234 (388)
T 3pe7_A 157 KFHEFYFTKPCCRLMRVDLKTGESTVILQENQWL-GHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNM-RKVKTH 234 (388)
T ss_dssp HHHHHGGGCCCEEEEEEETTTCCEEEEEEESSCE-EEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCC-EESCCC
T ss_pred hhhhhhccCCcceEEEEECCCCceEEeecCCccc-cccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCce-EEeeeC
Confidence 236899999987752 222222222 3458899 88887665543 3788888875544 333333
Q ss_pred C--CceeEEEeCCC-CeEEEEeC-CC----cEEEEeCCCCceE--EEeeccCCC-CcEEEEEccCCCCeEEee
Q 022324 233 C--APVTSLSLSED-QLIISGSS-LG----SIAISGLSSDQRV--ATLRSTDCT-GHIICLMYPQFLHMLFFL 294 (299)
Q Consensus 233 ~--~~i~~~~~~~~-~~l~~~~~-dg----~i~iwd~~~~~~~--~~~~~~~~~-~~i~~~~~s~~g~~l~s~ 294 (299)
. ..+..++|+|| +.|+..+. ++ .|++||+.+++.. ..+...... .....++|+|||+.|+..
T Consensus 235 ~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~ 307 (388)
T 3pe7_A 235 AEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVD 307 (388)
T ss_dssp CTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC---
T ss_pred CCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeE
Confidence 3 35788999999 76655433 22 3999999988743 333221000 001123689999888753
No 171
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.43 E-value=1.1e-10 Score=96.27 Aligned_cols=179 Identities=11% Similarity=0.080 Sum_probs=125.2
Q ss_pred ccCeeEEEe-cCC-EEEEEeCC------------------------CcEEEEecCCceeEEEecCC--CceeEEEEecCC
Q 022324 112 SVGVDQCRM-KRG-LILTGVGD------------------------KVMRLWSLEGYKCVEEYSLP--NAASLVDFDFDE 163 (299)
Q Consensus 112 ~~~i~~~~~-~~~-~l~s~~~d------------------------g~i~iwd~~~~~~~~~~~~~--~~~~~~~~~~~~ 163 (299)
-+.+.++++ +++ ++++...+ ++|.+||..+++.+..+... ..+..+++++++
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g 102 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDG 102 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTS
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCC
Confidence 457888998 556 66666666 47999999999987766532 245569999999
Q ss_pred CEEE-EEcCCeEEEEecCCce---eeeecc------CCc--cceeeeecc-CCCeEEEec-CCCcEEEEEcCCcceeeec
Q 022324 164 SKIV-GLIGTRICIWRRNGLR---SVFPSR------EGT--FMKGLCMRY-FDPEAVVGC-EDGTARVFDMYSRKCSQII 229 (299)
Q Consensus 164 ~~l~-~~~d~~i~v~d~~~~~---~~~~~~------~~~--~~~~~~~~~-~~~~l~s~~-~d~~i~iwd~~~~~~~~~~ 229 (299)
++++ ...++.|++||..+.. ..+... .+. ....+++.+ .+..+++.+ .++.|++|| .+++.+..+
T Consensus 103 ~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~~~ 181 (329)
T 3fvz_A 103 NYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFVTQW 181 (329)
T ss_dssp CEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTSCEEEEE
T ss_pred CEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEEEEe
Confidence 9777 5667899999987652 111110 111 223468888 555566665 689999999 557777666
Q ss_pred cc----------cCCceeEEEeCCC--CeEEEEeCCCcEEEEeCCCCceEEEeeccCCCCcEEEEEccCCCCeEE
Q 022324 230 RM----------HCAPVTSLSLSED--QLIISGSSLGSIAISGLSSDQRVATLRSTDCTGHIICLMYPQFLHMLF 292 (299)
Q Consensus 230 ~~----------~~~~i~~~~~~~~--~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~ 292 (299)
.. +-..+..++++|+ .++++...++.|++||..+++.+.++........+.+++|+| |..+.
T Consensus 182 ~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~p-g~~~~ 255 (329)
T 3fvz_A 182 GEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIP-GFLFA 255 (329)
T ss_dssp CEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEET-TEEEE
T ss_pred ccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecC-CEEEE
Confidence 42 2234889999987 566666778999999998899998886443222788999999 43333
No 172
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.41 E-value=1.4e-10 Score=93.50 Aligned_cols=183 Identities=12% Similarity=0.088 Sum_probs=127.5
Q ss_pred ccccCeeEEEe-cCC-EEEEEeCCCcEEEEecCCceeEEEecC------C-CceeEEEEe-cCCCEEEEEc--CCeEEEE
Q 022324 110 AHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEYSL------P-NAASLVDFD-FDESKIVGLI--GTRICIW 177 (299)
Q Consensus 110 ~h~~~i~~~~~-~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~------~-~~~~~~~~~-~~~~~l~~~~--d~~i~v~ 177 (299)
++-....++++ +++ ++++...++.|.+||.. ++.+..+.. + ..+..++++ ++++++++.. ++.|.+|
T Consensus 27 g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~ 105 (286)
T 1q7f_A 27 GQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIY 105 (286)
T ss_dssp TCBSCEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEE
T ss_pred CccCCCceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEE
Confidence 55667888888 555 67777889999999987 666666542 1 234458884 6666666553 8899999
Q ss_pred ecCCcee-eeeccCCccceeeeeccCCCeEEEecCCCcEEEEEcCCcceeeecc--ccCCceeEEEeCCC-CeEEEEeCC
Q 022324 178 RRNGLRS-VFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIR--MHCAPVTSLSLSED-QLIISGSSL 253 (299)
Q Consensus 178 d~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~--~~~~~i~~~~~~~~-~~l~~~~~d 253 (299)
|...... .+..........+++.+++..+++...++.|.+||.. ++.+..+. .+...+..++++++ +++++...+
T Consensus 106 d~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~ 184 (286)
T 1q7f_A 106 NQYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRA 184 (286)
T ss_dssp CTTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGG
T ss_pred CCCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCccCCcEEEEECCCCCEEEEECCC
Confidence 9544322 2222121223346788888767777778999999965 55555553 33456899999998 777777789
Q ss_pred CcEEEEeCCCCceEEEeeccCCCCcEEEEEccCCCCeEEeee
Q 022324 254 GSIAISGLSSDQRVATLRSTDCTGHIICLMYPQFLHMLFFLC 295 (299)
Q Consensus 254 g~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~s~s 295 (299)
+.|++||. +++.+..+........+.+++++|+|+++++..
T Consensus 185 ~~i~~~~~-~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~ 225 (286)
T 1q7f_A 185 HCVKVFNY-EGQYLRQIGGEGITNYPIGVGINSNGEILIADN 225 (286)
T ss_dssp TEEEEEET-TCCEEEEESCTTTSCSEEEEEECTTCCEEEEEC
T ss_pred CEEEEEcC-CCCEEEEEccCCccCCCcEEEECCCCCEEEEeC
Confidence 99999997 567777775442112789999999998887764
No 173
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.40 E-value=8.8e-11 Score=103.60 Aligned_cols=172 Identities=10% Similarity=-0.010 Sum_probs=129.7
Q ss_pred EEEEEeCCCcEEEEecCCceeEEEecCCCceeEEEEecCCCEEE-EEcCCeEEEEecC--CceeeeeccCCccceeeeec
Q 022324 124 LILTGVGDKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIV-GLIGTRICIWRRN--GLRSVFPSREGTFMKGLCMR 200 (299)
Q Consensus 124 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~d~~i~v~d~~--~~~~~~~~~~~~~~~~~~~~ 200 (299)
++++...++.|.++|..+++.+..+.....+..+.++|++++++ ++.++.|.+||+. +.+.+.....+.....++++
T Consensus 169 ~~V~~~~~~~V~viD~~t~~v~~~i~~g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~~P~~ia~s 248 (567)
T 1qks_A 169 FSVTLRDAGQIALIDGSTYEIKTVLDTGYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARSIETS 248 (567)
T ss_dssp EEEEETTTTEEEEEETTTCCEEEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSEEEEEEEC
T ss_pred EEEEeCCCCeEEEEECCCCeEEEEEeCCCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCCCCceeEEc
Confidence 67778889999999999999999998776666799999999988 8889999999995 55444333334334456888
Q ss_pred ----cCCCeEEEec-CCCcEEEEEcCCcceeeecccc----------CC-ceeEEEeCCC--CeEEEEeCCCcEEEEeCC
Q 022324 201 ----YFDPEAVVGC-EDGTARVFDMYSRKCSQIIRMH----------CA-PVTSLSLSED--QLIISGSSLGSIAISGLS 262 (299)
Q Consensus 201 ----~~~~~l~s~~-~d~~i~iwd~~~~~~~~~~~~~----------~~-~i~~~~~~~~--~~l~~~~~dg~i~iwd~~ 262 (299)
|++.+++++. .++.+.++|..+.+.+..+... .. .+..+..+++ .+++....+|.|.++|..
T Consensus 249 ~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~ 328 (567)
T 1qks_A 249 KMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYT 328 (567)
T ss_dssp CSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETT
T ss_pred cccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecC
Confidence 6888866655 4689999999999888776421 12 5778888876 566777778999999998
Q ss_pred CCceEEEeeccCCCCcEEEEEccCCCCeEEeeec
Q 022324 263 SDQRVATLRSTDCTGHIICLMYPQFLHMLFFLCF 296 (299)
Q Consensus 263 ~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~s~s~ 296 (299)
..+.+......... ....+.|+|+|+++++++.
T Consensus 329 ~~~~~~v~~i~~~~-~~~d~~~~pdgr~~~va~~ 361 (567)
T 1qks_A 329 DLNNLKTTEISAER-FLHDGGLDGSHRYFITAAN 361 (567)
T ss_dssp CSSEEEEEEEECCS-SEEEEEECTTSCEEEEEEG
T ss_pred CCccceeeeeeccc-cccCceECCCCCEEEEEeC
Confidence 76433322222222 6889999999999988764
No 174
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.40 E-value=4.9e-11 Score=98.47 Aligned_cols=184 Identities=11% Similarity=0.011 Sum_probs=126.9
Q ss_pred ccccCeeEEEe-cCC-EEEEEeCCCcEEEEecCCce-eEEEec---------CC-CceeEEEEec-CCCEEEEE--cCCe
Q 022324 110 AHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYK-CVEEYS---------LP-NAASLVDFDF-DESKIVGL--IGTR 173 (299)
Q Consensus 110 ~h~~~i~~~~~-~~~-~l~s~~~dg~i~iwd~~~~~-~~~~~~---------~~-~~~~~~~~~~-~~~~l~~~--~d~~ 173 (299)
++-.....+++ +++ ++++...++.|++||..... .+..+. .+ ..+..++++| ++.++++. .++.
T Consensus 88 ~~~~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~ 167 (329)
T 3fvz_A 88 NLFYLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSR 167 (329)
T ss_dssp TTCSSEEEEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCE
T ss_pred CccCCceEEEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCe
Confidence 34456788888 556 77788888999999986442 455442 11 1355699999 77777744 5899
Q ss_pred EEEEecCCceee-eeccC-------C--ccceeeeeccC-CCeEEEecCCCcEEEEEcCCcceeeecc--ccCCceeEEE
Q 022324 174 ICIWRRNGLRSV-FPSRE-------G--TFMKGLCMRYF-DPEAVVGCEDGTARVFDMYSRKCSQIIR--MHCAPVTSLS 240 (299)
Q Consensus 174 i~v~d~~~~~~~-~~~~~-------~--~~~~~~~~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~--~~~~~i~~~~ 240 (299)
|++|+....... +.... + .....+++.++ +..+++...++.|++||..+++.+..+. .+...+..++
T Consensus 168 I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~ 247 (329)
T 3fvz_A 168 IVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAIS 247 (329)
T ss_dssp EEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEE
T ss_pred EEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceee
Confidence 999996544322 21111 0 11234678887 4556777788999999999888887774 4556788999
Q ss_pred eCCC-------CeEEEEeCCCcEEEEeCCCCceEEEee---ccCCCCcEEEEEccCCCCeEEeee
Q 022324 241 LSED-------QLIISGSSLGSIAISGLSSDQRVATLR---STDCTGHIICLMYPQFLHMLFFLC 295 (299)
Q Consensus 241 ~~~~-------~~l~~~~~dg~i~iwd~~~~~~~~~~~---~~~~~~~i~~~~~s~~g~~l~s~s 295 (299)
++|+ +.+++...+..|++||+.+++.+..+. .+.. .+.+++++|+|.++++.+
T Consensus 248 ~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~--~p~~ia~~~dG~lyvad~ 310 (329)
T 3fvz_A 248 YIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFD--MPHDIVASEDGTVYIGDA 310 (329)
T ss_dssp EETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCS--SEEEEEECTTSEEEEEES
T ss_pred ecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccC--CeeEEEECCCCCEEEEEC
Confidence 9994 222223345589999999999998884 3333 789999999996666653
No 175
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.39 E-value=2.7e-10 Score=92.47 Aligned_cols=185 Identities=12% Similarity=0.024 Sum_probs=126.7
Q ss_pred eEEeeccccCeeEEEe-cCC-EEEEEeCCCcEEEEecCCceeEEEecCC-----CceeEEEEecCCCEEEEE----c---
Q 022324 105 IDQWKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEYSLP-----NAASLVDFDFDESKIVGL----I--- 170 (299)
Q Consensus 105 ~~~~~~h~~~i~~~~~-~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~-----~~~~~~~~~~~~~~l~~~----~--- 170 (299)
.+.+..+...+.++.+ +++ ++++...++.|.+||..+++........ ..+..++++|+++++++. .
T Consensus 61 ~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~ 140 (296)
T 3e5z_A 61 LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKP 140 (296)
T ss_dssp EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCG
T ss_pred eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccc
Confidence 4455667778899999 666 5555556789999999888765433221 123348999999987742 1
Q ss_pred -----------CCeEEEEecCCceeeeeccCCccceeeeeccCCCeEEEecCCCcEEEEEcC-Ccce---eeeccccCCc
Q 022324 171 -----------GTRICIWRRNGLRSVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMY-SRKC---SQIIRMHCAP 235 (299)
Q Consensus 171 -----------d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~-~~~~---~~~~~~~~~~ 235 (299)
.+.|+.++.......+..... ....+++++++..+++.+.++.|.+||+. +++. ...+..+...
T Consensus 141 ~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~-~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~ 219 (296)
T 3e5z_A 141 EEGYGGEMELPGRWVFRLAPDGTLSAPIRDRV-KPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGK 219 (296)
T ss_dssp GGSSCCCCCSSSCEEEEECTTSCEEEEECCCS-SEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSC
T ss_pred cccccccccCCCcEEEEECCCCCEEEeecCCC-CCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCC
Confidence 346777776533222222222 22356899999988778888999999986 4544 2233334556
Q ss_pred eeEEEeCCC-CeEEEEeCCCcEEEEeCCCCceEEEeeccCCCCcEEEEEc-cCCCCeEEeeec
Q 022324 236 VTSLSLSED-QLIISGSSLGSIAISGLSSDQRVATLRSTDCTGHIICLMY-PQFLHMLFFLCF 296 (299)
Q Consensus 236 i~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~-s~~g~~l~s~s~ 296 (299)
+..++++++ +++++. ++.|.+||.. ++.+..+..+. .+.+++| +|+++.|++++.
T Consensus 220 p~~i~~d~~G~l~v~~--~~~v~~~~~~-g~~~~~~~~~~---~~~~~~f~~~d~~~L~v~t~ 276 (296)
T 3e5z_A 220 TDGLRVDAGGLIWASA--GDGVHVLTPD-GDELGRVLTPQ---TTSNLCFGGPEGRTLYMTVS 276 (296)
T ss_dssp CCSEEEBTTSCEEEEE--TTEEEEECTT-SCEEEEEECSS---CCCEEEEESTTSCEEEEEET
T ss_pred CCeEEECCCCCEEEEc--CCeEEEECCC-CCEEEEEECCC---CceeEEEECCCCCEEEEEcC
Confidence 778999998 655555 7889999986 88888887665 3788999 689988887764
No 176
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.39 E-value=2.4e-11 Score=109.72 Aligned_cols=179 Identities=8% Similarity=-0.043 Sum_probs=119.6
Q ss_pred cccCeeEEEe-cCC-EEEEEeCC----------CcEEEEecCC------ceeEEEe-cCCCceeEEEEecCCCEEE-EEc
Q 022324 111 HSVGVDQCRM-KRG-LILTGVGD----------KVMRLWSLEG------YKCVEEY-SLPNAASLVDFDFDESKIV-GLI 170 (299)
Q Consensus 111 h~~~i~~~~~-~~~-~l~s~~~d----------g~i~iwd~~~------~~~~~~~-~~~~~~~~~~~~~~~~~l~-~~~ 170 (299)
|...+..+.| +++ .|++++.+ ..|++||+.+ ++..... ..+.....++|+|||+.|+ ++.
T Consensus 128 ~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~ 207 (662)
T 3azo_A 128 GGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRELSDDAHRFVTGPRLSPDGRQAVWLAW 207 (662)
T ss_dssp TCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSEESSCSCSSEECCCEECTTSSEEEEEEE
T ss_pred CCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCceeEEEecCCCcccCceECCCCCEEEEEEC
Confidence 5667788888 677 88888776 5899999988 6654433 3344444589999999998 664
Q ss_pred C--------CeEEEEecC-Cc---e-eee-eccCCccceeeeeccCCCeEEEecCCC--cEEEEEcCCcceeeeccccCC
Q 022324 171 G--------TRICIWRRN-GL---R-SVF-PSREGTFMKGLCMRYFDPEAVVGCEDG--TARVFDMYSRKCSQIIRMHCA 234 (299)
Q Consensus 171 d--------~~i~v~d~~-~~---~-~~~-~~~~~~~~~~~~~~~~~~~l~s~~~d~--~i~iwd~~~~~~~~~~~~~~~ 234 (299)
+ ..|++||+. ++ . ..+ ..+... ....+|++++..+++++.++ .|.+||+.+++.......+..
T Consensus 208 ~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~-~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~ 286 (662)
T 3azo_A 208 DHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEA-IAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRREEE 286 (662)
T ss_dssp CTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBC-EEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCCSSB
T ss_pred CCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCce-EcceEECCCCeEEEEECCCCCeEEEEEECCCCceeeccccccc
Confidence 4 389999998 44 2 222 222222 23458999999777777788 566677666665443332222
Q ss_pred c--------eeEEEeCCC-CeEEEEeCCCcEEEE--eCCCCceEEEeeccCCCCcEEEE-EccCCCCeEEee
Q 022324 235 P--------VTSLSLSED-QLIISGSSLGSIAIS--GLSSDQRVATLRSTDCTGHIICL-MYPQFLHMLFFL 294 (299)
Q Consensus 235 ~--------i~~~~~~~~-~~l~~~~~dg~i~iw--d~~~~~~~~~~~~~~~~~~i~~~-~~s~~g~~l~s~ 294 (299)
. +..++|+|+ +++++++. +.++|| |+.+++ +..+..+.. .+..+ +++.+.-+++++
T Consensus 287 ~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~-~~~l~~~~~--~~~~~~s~~~~~~~~~~~ 354 (662)
T 3azo_A 287 FAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDPESGE-LVDAAGPWT--EWAATLTVSGTRAVGVAA 354 (662)
T ss_dssp SSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEETTTTE-EEECCSSCC--EEEEEEEEETTEEEEEEE
T ss_pred ccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEECCCCc-EEEecCCCC--eEEEEEecCCCEEEEEEc
Confidence 2 467888888 88888888 999999 655454 677776655 67776 554333333333
No 177
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.38 E-value=2.6e-11 Score=109.51 Aligned_cols=185 Identities=9% Similarity=-0.098 Sum_probs=125.9
Q ss_pred eeccccCeeEEEecCC--EEEEE--eCCCcEEEEecCCceeEEEecCCC-cee---------EEEEe--cCCCE-EEEEc
Q 022324 108 WKAHSVGVDQCRMKRG--LILTG--VGDKVMRLWSLEGYKCVEEYSLPN-AAS---------LVDFD--FDESK-IVGLI 170 (299)
Q Consensus 108 ~~~h~~~i~~~~~~~~--~l~s~--~~dg~i~iwd~~~~~~~~~~~~~~-~~~---------~~~~~--~~~~~-l~~~~ 170 (299)
+.+|...+..+.+.++ ++++. +.++...||....+.....+..+. .+. ...|+ ||++. |+.+.
T Consensus 19 ~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~ 98 (662)
T 3azo_A 19 VASRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTH 98 (662)
T ss_dssp HHHTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEB
T ss_pred HhhcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCcceeCCCCccccccccccCCccceeeeecCCCeEEEEEE
Confidence 3678889999999555 55555 558899999965444445555443 333 45555 99998 77443
Q ss_pred --CCeEEEEecC--C-ce-eeeecc----CCccceeeeeccCCCeEEEecCC----------CcEEEEEcCC------cc
Q 022324 171 --GTRICIWRRN--G-LR-SVFPSR----EGTFMKGLCMRYFDPEAVVGCED----------GTARVFDMYS------RK 224 (299)
Q Consensus 171 --d~~i~v~d~~--~-~~-~~~~~~----~~~~~~~~~~~~~~~~l~s~~~d----------~~i~iwd~~~------~~ 224 (299)
+..|+++++. + +. ..+... ........+|+|+++.|++++.+ ..|++||+.+ ++
T Consensus 99 ~~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 178 (662)
T 3azo_A 99 FGDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSA 178 (662)
T ss_dssp TTTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGG
T ss_pred CCCCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCc
Confidence 4678888876 2 32 333321 12223356899999998888766 5799999987 55
Q ss_pred eeeecc-ccCCceeEEEeCCC-CeEEEEeCC--------CcEEEEeCC-CC---ceEEEeeccCCCCcEEEEEccCCCCe
Q 022324 225 CSQIIR-MHCAPVTSLSLSED-QLIISGSSL--------GSIAISGLS-SD---QRVATLRSTDCTGHIICLMYPQFLHM 290 (299)
Q Consensus 225 ~~~~~~-~~~~~i~~~~~~~~-~~l~~~~~d--------g~i~iwd~~-~~---~~~~~~~~~~~~~~i~~~~~s~~g~~ 290 (299)
. ..+. .+...+..++|+|| ++|+.++.+ ..|++||+. ++ +.......+.. .+..++|+|||++
T Consensus 179 ~-~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~--~~~~~~~spdg~l 255 (662)
T 3azo_A 179 V-RELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEE--AIAQAEWAPDGSL 255 (662)
T ss_dssp S-EESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTB--CEEEEEECTTSCE
T ss_pred e-eEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCc--eEcceEECCCCeE
Confidence 4 3444 45567888999999 888877754 379999998 56 43333333344 7999999999997
Q ss_pred EEeee
Q 022324 291 LFFLC 295 (299)
Q Consensus 291 l~s~s 295 (299)
+++++
T Consensus 256 ~~~~~ 260 (662)
T 3azo_A 256 IVATD 260 (662)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 76664
No 178
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.38 E-value=1.1e-10 Score=97.77 Aligned_cols=169 Identities=11% Similarity=0.082 Sum_probs=112.6
Q ss_pred EEEEEeCC--CcEEEEec--CCceeEE--Eec--CCCceeEEEEecCCCEEE-EEcCCeEEEEecC-Cceee--eecc-C
Q 022324 124 LILTGVGD--KVMRLWSL--EGYKCVE--EYS--LPNAASLVDFDFDESKIV-GLIGTRICIWRRN-GLRSV--FPSR-E 190 (299)
Q Consensus 124 ~l~s~~~d--g~i~iwd~--~~~~~~~--~~~--~~~~~~~~~~~~~~~~l~-~~~d~~i~v~d~~-~~~~~--~~~~-~ 190 (299)
+++.|+.. +.|.+|++ .+++... ... ....+..++++|++++|+ ++.+ .|.+|++. +++.. .... .
T Consensus 4 ~~~vg~~~~~~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~ 82 (365)
T 1jof_A 4 HLMIGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIG 82 (365)
T ss_dssp EEEEEESSSSCEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECC
T ss_pred EEEEEEccCCCcEEEEEEECCCCCEEEeeEEccCCCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecC
Confidence 35556653 56777764 5665432 222 223455699999999888 6666 99999986 55422 1111 1
Q ss_pred CccceeeeeccCCCe--EEEec-------------CCCcEEEEEcC-Ccceeeecc----ccCCceeEEEeCCC-CeEEE
Q 022324 191 GTFMKGLCMRYFDPE--AVVGC-------------EDGTARVFDMY-SRKCSQIIR----MHCAPVTSLSLSED-QLIIS 249 (299)
Q Consensus 191 ~~~~~~~~~~~~~~~--l~s~~-------------~d~~i~iwd~~-~~~~~~~~~----~~~~~i~~~~~~~~-~~l~~ 249 (299)
+.. ..+++++++.. +++++ .++.+.+|++. +++....+. .+...+.+++|+|+ +++++
T Consensus 83 g~~-~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~ 161 (365)
T 1jof_A 83 GHP-RANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYS 161 (365)
T ss_dssp SSG-GGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEE
T ss_pred CCC-ccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEE
Confidence 222 23588898885 44553 68999999997 465544333 24567899999999 77777
Q ss_pred Ee-CCCcEEEEeCC-CCceE--EEeecc--CCCCcEEEEEccCCCCeEEeeec
Q 022324 250 GS-SLGSIAISGLS-SDQRV--ATLRST--DCTGHIICLMYPQFLHMLFFLCF 296 (299)
Q Consensus 250 ~~-~dg~i~iwd~~-~~~~~--~~~~~~--~~~~~i~~~~~s~~g~~l~s~s~ 296 (299)
+. .++.|++||+. +++.. ..+... .. .+..++|+|+|++|++++.
T Consensus 162 ~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~--~p~~~~~spdg~~l~v~~~ 212 (365)
T 1jof_A 162 ADLTANKLWTHRKLASGEVELVGSVDAPDPGD--HPRWVAMHPTGNYLYALME 212 (365)
T ss_dssp EETTTTEEEEEEECTTSCEEEEEEEECSSTTC--CEEEEEECTTSSEEEEEET
T ss_pred EcCCCCEEEEEEECCCCCEEEeeeEecCCCCC--CCCEeEECCCCCEEEEEEC
Confidence 65 46899999998 67653 334322 33 6899999999999887653
No 179
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.35 E-value=1.2e-09 Score=87.73 Aligned_cols=186 Identities=9% Similarity=-0.009 Sum_probs=134.7
Q ss_pred eEEeeccc-cCeeEEEe-cCC-EEEEEeCCCcEEEEecCCceeEEEecCCC--ceeEEEEecCCCEEE-EEc-CCeEEEE
Q 022324 105 IDQWKAHS-VGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEYSLPN--AASLVDFDFDESKIV-GLI-GTRICIW 177 (299)
Q Consensus 105 ~~~~~~h~-~~i~~~~~-~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~-~~~-d~~i~v~ 177 (299)
+-.+..+. ..+.++.+ +++ +++ +.++.|..||. +++.+..+..+. ....+.+.++++.++ .+. ++.+..+
T Consensus 28 ~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~v 104 (276)
T 3no2_A 28 VWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAPAGCEMQTARILPDGNALVAWCGHPSTILEV 104 (276)
T ss_dssp EEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCTTCEEEEEEECTTSCEEEEEESTTEEEEEE
T ss_pred EEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCCCccccccEECCCCCEEEEecCCCCEEEEE
Confidence 33444444 46777777 666 555 56788999999 899999998753 344588999999998 555 6788888
Q ss_pred ecCCcee-eeeccC---Cc--cceeeeeccCCCeEEEecCCCcEEEEEcCCcceeeeccccCCceeEEEeCCC-CeEEEE
Q 022324 178 RRNGLRS-VFPSRE---GT--FMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISG 250 (299)
Q Consensus 178 d~~~~~~-~~~~~~---~~--~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~-~~l~~~ 250 (299)
|...... .+.... .. ....++..+++..+++...++.|..||.. |+.+.++... ..+.++...++ ++++++
T Consensus 105 d~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~~-~~~~~~~~~~~g~~~v~~ 182 (276)
T 3no2_A 105 NMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQLLNSVKLS-GTPFSSAFLDNGDCLVAC 182 (276)
T ss_dssp CTTSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECS-SCCCEEEECTTSCEEEEC
T ss_pred eCCCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CCEEEEEECC-CCccceeEcCCCCEEEEe
Confidence 8754421 111111 11 11123567788889999999999999998 9999888654 44566777787 888888
Q ss_pred eCCCcEEEEeCCCCceEEEeeccCC----CCcEEEEEccCCCCeEEeee
Q 022324 251 SSLGSIAISGLSSDQRVATLRSTDC----TGHIICLMYPQFLHMLFFLC 295 (299)
Q Consensus 251 ~~dg~i~iwd~~~~~~~~~~~~~~~----~~~i~~~~~s~~g~~l~s~s 295 (299)
+.++.|..+|..+|+.+.++..... ...+..++..++|..+++..
T Consensus 183 ~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~ 231 (276)
T 3no2_A 183 GDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNW 231 (276)
T ss_dssp BTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEE
T ss_pred CCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEec
Confidence 8888999999999999999875421 11478899999999888863
No 180
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.33 E-value=4.4e-10 Score=91.19 Aligned_cols=186 Identities=11% Similarity=-0.043 Sum_probs=124.5
Q ss_pred eeeEEeeccccCeeEEEe-cCC--EEEEEeCCCcEEEEecCCceeEEEecCCCc-eeEEEEecCCCEEEEE-cCCeEEEE
Q 022324 103 IDIDQWKAHSVGVDQCRM-KRG--LILTGVGDKVMRLWSLEGYKCVEEYSLPNA-ASLVDFDFDESKIVGL-IGTRICIW 177 (299)
Q Consensus 103 ~~~~~~~~h~~~i~~~~~-~~~--~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~-~d~~i~v~ 177 (299)
..+..+..+.....++.| +++ +++++..++.|..||..++ ...+..+.. +..++++++++++++. .++.|.+|
T Consensus 18 ~~~~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~ 95 (296)
T 3e5z_A 18 AEARRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQ 95 (296)
T ss_dssp CCCEEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEE
T ss_pred CcEEEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEE
Confidence 334555666667778888 544 6888888999999999887 455554443 4559999999988755 46899999
Q ss_pred ecCCceee-e-eccCCc---cceeeeeccCCCeEEE----ec-------------CCCcEEEEEcCCcceeeeccccCCc
Q 022324 178 RRNGLRSV-F-PSREGT---FMKGLCMRYFDPEAVV----GC-------------EDGTARVFDMYSRKCSQIIRMHCAP 235 (299)
Q Consensus 178 d~~~~~~~-~-~~~~~~---~~~~~~~~~~~~~l~s----~~-------------~d~~i~iwd~~~~~~~~~~~~~~~~ 235 (299)
|..+++.. + ....+. ....+++.+++..+++ |. ..+.|..++.. ++. ..+..+...
T Consensus 96 d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~-~~~~~~~~~ 173 (296)
T 3e5z_A 96 REPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTL-SAPIRDRVK 173 (296)
T ss_dssp CSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCE-EEEECCCSS
T ss_pred cCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCE-EEeecCCCC
Confidence 99665422 2 111111 1123577888876665 32 13456666655 443 333355566
Q ss_pred eeEEEeCCC-CeEEEEeCCCcEEEEeCC-CCce---EEEeeccCCCCcEEEEEccCCCCeEEee
Q 022324 236 VTSLSLSED-QLIISGSSLGSIAISGLS-SDQR---VATLRSTDCTGHIICLMYPQFLHMLFFL 294 (299)
Q Consensus 236 i~~~~~~~~-~~l~~~~~dg~i~iwd~~-~~~~---~~~~~~~~~~~~i~~~~~s~~g~~l~s~ 294 (299)
+..++|+|+ +.+++.+.++.|.+||+. +++. ...+..+.. .+.+++++++|+++++.
T Consensus 174 ~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~--~p~~i~~d~~G~l~v~~ 235 (296)
T 3e5z_A 174 PNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPG--KTDGLRVDAGGLIWASA 235 (296)
T ss_dssp EEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSS--CCCSEEEBTTSCEEEEE
T ss_pred CccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCC--CCCeEEECCCCCEEEEc
Confidence 889999999 777777888999999997 4554 333422222 67789999999877665
No 181
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.33 E-value=2.5e-12 Score=108.59 Aligned_cols=172 Identities=8% Similarity=-0.122 Sum_probs=110.8
Q ss_pred EEe-cCC-EEEEEeCCCcEEEEecCCceeEEEecCCCcee-E-------------------EEEecCCCEEE-E-----E
Q 022324 118 CRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNAAS-L-------------------VDFDFDESKIV-G-----L 169 (299)
Q Consensus 118 ~~~-~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~-~-------------------~~~~~~~~~l~-~-----~ 169 (299)
+.| +++ +|+.++.++.|.+||+.+++.......+.... . ..++|+++.++ . .
T Consensus 86 ~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~ 165 (396)
T 3c5m_A 86 GFISTDERAFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTN 165 (396)
T ss_dssp CEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTC
T ss_pred ceECCCCCEEEEEEcCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCC
Confidence 566 666 89899999999999999888766555443211 1 24567777665 3 3
Q ss_pred cCCeEEEEecCCceee-eeccCCccceeeeecc-CCCeEEEecCC------CcEEEEEcCCcceeeecccc-CCceeEEE
Q 022324 170 IGTRICIWRRNGLRSV-FPSREGTFMKGLCMRY-FDPEAVVGCED------GTARVFDMYSRKCSQIIRMH-CAPVTSLS 240 (299)
Q Consensus 170 ~d~~i~v~d~~~~~~~-~~~~~~~~~~~~~~~~-~~~~l~s~~~d------~~i~iwd~~~~~~~~~~~~~-~~~i~~~~ 240 (299)
.+..|++||+.+++.. +...... .....|++ ++..++..+.+ ..|.+||+..++........ ...+..++
T Consensus 166 ~~~~l~~~d~~~g~~~~~~~~~~~-~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~ 244 (396)
T 3c5m_A 166 PTCRLIKVDIETGELEVIHQDTAW-LGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEF 244 (396)
T ss_dssp CCEEEEEEETTTCCEEEEEEESSC-EEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEEEEEE
T ss_pred CcceEEEEECCCCcEEeeccCCcc-cccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCccccceE
Confidence 5668999999876522 2222222 22457888 66666554433 46888998765543333211 23578899
Q ss_pred eCCC-CeEEEEeCC-----CcEEEEeCCCCceEEEeeccCCCCcEEEEEccC-CCCeEEeee
Q 022324 241 LSED-QLIISGSSL-----GSIAISGLSSDQRVATLRSTDCTGHIICLMYPQ-FLHMLFFLC 295 (299)
Q Consensus 241 ~~~~-~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~-~g~~l~s~s 295 (299)
|+|+ +.|+.++.+ +.|++||+.+++...... .. ... +.|+| +|+++++++
T Consensus 245 ~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~-~~---~~~-~~~s~~dg~~l~~~~ 301 (396)
T 3c5m_A 245 WIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMV-MP---PCS-HLMSNFDGSLMVGDG 301 (396)
T ss_dssp ECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEE-CC---SEE-EEEECSSSSEEEEEE
T ss_pred ECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeee-CC---CCC-CCccCCCCceEEEec
Confidence 9999 767666543 449999998887543322 22 233 89999 999888643
No 182
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.32 E-value=7.3e-10 Score=91.40 Aligned_cols=176 Identities=10% Similarity=-0.013 Sum_probs=120.8
Q ss_pred cCeeEEEe-cCCEEEEEe-CCCcEEEEecCCceeEEEecCCC------ceeEEEEecCCCEEEEE--cCCeEEEEecCCc
Q 022324 113 VGVDQCRM-KRGLILTGV-GDKVMRLWSLEGYKCVEEYSLPN------AASLVDFDFDESKIVGL--IGTRICIWRRNGL 182 (299)
Q Consensus 113 ~~i~~~~~-~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~------~~~~~~~~~~~~~l~~~--~d~~i~v~d~~~~ 182 (299)
.....+.+ +++.++.+. .++.|.+||..+++....+.... ....+++ .+++.+++. .++.|.++|..+.
T Consensus 84 ~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~-~~~~lyv~~~~~~~~v~viD~~t~ 162 (328)
T 3dsm_A 84 TSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ-YGKYVYVNCWSYQNRILKIDTETD 162 (328)
T ss_dssp SSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE-ETTEEEEEECTTCCEEEEEETTTT
T ss_pred CCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE-ECCEEEEEcCCCCCEEEEEECCCC
Confidence 45677888 777555555 89999999999999888877554 4445777 344444454 4889999999987
Q ss_pred eeeeeccCCccceeeeeccCCCeEEEecCC----------CcEEEEEcCCcceeeecccc-CCceeEEEeCCC-CeEEEE
Q 022324 183 RSVFPSREGTFMKGLCMRYFDPEAVVGCED----------GTARVFDMYSRKCSQIIRMH-CAPVTSLSLSED-QLIISG 250 (299)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d----------~~i~iwd~~~~~~~~~~~~~-~~~i~~~~~~~~-~~l~~~ 250 (299)
+.......+.....+++.+++..+++...+ +.|.++|..+++....+... ...+..++++|+ +.+.++
T Consensus 163 ~~~~~i~~g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~ 242 (328)
T 3dsm_A 163 KVVDELTIGIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWI 242 (328)
T ss_dssp EEEEEEECSSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEE
T ss_pred eEEEEEEcCCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEE
Confidence 643322222222345777877766665544 78999999998887666432 346899999998 777766
Q ss_pred eCCCcEEEEeCCCCceEEE--eeccCCCCcEEEEEccCC-CCeEEe
Q 022324 251 SSLGSIAISGLSSDQRVAT--LRSTDCTGHIICLMYPQF-LHMLFF 293 (299)
Q Consensus 251 ~~dg~i~iwd~~~~~~~~~--~~~~~~~~~i~~~~~s~~-g~~l~s 293 (299)
.. .|.+||..+++.... +..... ...+++++|+ +..+++
T Consensus 243 ~~--~v~~~d~~t~~~~~~~~~~~~~~--~p~gi~vdp~~g~lyva 284 (328)
T 3dsm_A 243 NN--DIWRMPVEADRVPVRPFLEFRDT--KYYGLTVNPNNGEVYVA 284 (328)
T ss_dssp SS--SEEEEETTCSSCCSSCSBCCCSS--CEEEEEECTTTCCEEEE
T ss_pred cc--EEEEEECCCCceeeeeeecCCCC--ceEEEEEcCCCCeEEEE
Confidence 54 899999988875421 111122 6899999995 444444
No 183
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.30 E-value=1.7e-10 Score=96.48 Aligned_cols=98 Identities=9% Similarity=0.005 Sum_probs=72.4
Q ss_pred CCCcEEEEecCCceeEEEecCCCceeEEEEecCCCEEE-EE----------cCCeEEEEecCCceee--eecc-----CC
Q 022324 130 GDKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIV-GL----------IGTRICIWRRNGLRSV--FPSR-----EG 191 (299)
Q Consensus 130 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~----------~d~~i~v~d~~~~~~~--~~~~-----~~ 191 (299)
.|+.|.+||..+++.+..+..+... .++++|++++++ +. .++.|.+||..+.+.. +... .+
T Consensus 29 ~d~~v~v~D~~t~~~~~~i~~g~~p-~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g 107 (361)
T 2oiz_A 29 TESRVHVYDYTNGKFLGMVPTAFNG-HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGL 107 (361)
T ss_dssp GGCEEEEEETTTCCEEEEEECCEEE-EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBC
T ss_pred ccCeEEEEECCCCeEEEEecCCCCC-ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccC
Confidence 4789999999999999888877666 899999999988 54 2568999999876532 2221 11
Q ss_pred ccceeeeeccCCCeEEEecC--CCcEEEEEcCCcceeee
Q 022324 192 TFMKGLCMRYFDPEAVVGCE--DGTARVFDMYSRKCSQI 228 (299)
Q Consensus 192 ~~~~~~~~~~~~~~l~s~~~--d~~i~iwd~~~~~~~~~ 228 (299)
.....+++++++.+++++.. ++.|.+||+.+++.+..
T Consensus 108 ~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~ 146 (361)
T 2oiz_A 108 NYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVED 146 (361)
T ss_dssp CCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEE
T ss_pred CCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEE
Confidence 22334689999999887753 57899999877665544
No 184
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.29 E-value=5.3e-11 Score=100.36 Aligned_cols=180 Identities=9% Similarity=-0.058 Sum_probs=118.3
Q ss_pred eeEEEe-cCC-EEEEEeC-C--CcEEEEecCCceeEEEecCCCceeE-EEEecCCCEEE-EEcCCeEEEEecCCce--ee
Q 022324 115 VDQCRM-KRG-LILTGVG-D--KVMRLWSLEGYKCVEEYSLPNAASL-VDFDFDESKIV-GLIGTRICIWRRNGLR--SV 185 (299)
Q Consensus 115 i~~~~~-~~~-~l~s~~~-d--g~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~-~~~d~~i~v~d~~~~~--~~ 185 (299)
+..+.| |++ +|+.... + ..|.+||+.+++.......+..... ..|+|+++.|+ ++.++.|++||+.+++ .+
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~ 117 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLEEQVI 117 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCCEEEE
T ss_pred eecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEcCCcEEEEECCCCCcEEE
Confidence 566777 666 6665543 3 3788889998887655444444444 78999999998 8888899999998764 22
Q ss_pred eeccCCccce---e---------------eeeccCCCeEEEe-----cCCCcEEEEEcCCcceeeeccccCCceeEEEeC
Q 022324 186 FPSREGTFMK---G---------------LCMRYFDPEAVVG-----CEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLS 242 (299)
Q Consensus 186 ~~~~~~~~~~---~---------------~~~~~~~~~l~s~-----~~d~~i~iwd~~~~~~~~~~~~~~~~i~~~~~~ 242 (299)
...+.+.... + ..++|++..++.. ..+..|.+||+.+++..... .+...+..+.|+
T Consensus 118 ~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~-~~~~~~~~~~~s 196 (396)
T 3c5m_A 118 YTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIH-QDTAWLGHPIYR 196 (396)
T ss_dssp EECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEE-EESSCEEEEEEE
T ss_pred EecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeec-cCCcccccceEC
Confidence 2222221110 0 2455666664433 45678999999987765544 456778999999
Q ss_pred C-C-CeEEEEeCC------CcEEEEeCCCCceEEEeeccCCCCcEEEEEccCCCCeEEeeec
Q 022324 243 E-D-QLIISGSSL------GSIAISGLSSDQRVATLRSTDCTGHIICLMYPQFLHMLFFLCF 296 (299)
Q Consensus 243 ~-~-~~l~~~~~d------g~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~s~s~ 296 (299)
| + +.|+..+.+ ..|.+||+..++. ..+..+.....+..++|+|+|++|+.++.
T Consensus 197 p~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~~~~~~~~~~~spdg~~l~~~~~ 257 (396)
T 3c5m_A 197 PFDDSTVGFCHEGPHDLVDARMWLVNEDGSNV-RKIKEHAEGESCTHEFWIPDGSAMAYVSY 257 (396)
T ss_dssp TTEEEEEEEEECSCSSSCSCCCEEEETTSCCC-EESSCCCTTEEEEEEEECTTSSCEEEEEE
T ss_pred CCCCCEEEEEecCCCCCCCceEEEEECCCCce-eEeeccCCCccccceEECCCCCEEEEEec
Confidence 9 6 656655543 4688999876543 33333221115888999999998877653
No 185
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.28 E-value=3.9e-09 Score=82.53 Aligned_cols=191 Identities=13% Similarity=0.068 Sum_probs=130.8
Q ss_pred eEEeeccccC--eeEEEecCC-EEEEEeCCC--cEEEEecCCceeEEEecCCCceeEEEEecCCCEEE--EEcCCeEEEE
Q 022324 105 IDQWKAHSVG--VDQCRMKRG-LILTGVGDK--VMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIV--GLIGTRICIW 177 (299)
Q Consensus 105 ~~~~~~h~~~--i~~~~~~~~-~l~s~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~~d~~i~v~ 177 (299)
++++ .|... ...+.|.++ +..+.+.+| .|+++|+++++.+..+..........+.++++.|. .-.++.+.+|
T Consensus 34 v~~~-phd~~~ftqGL~~~~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~~~~v~v~ 112 (262)
T 3nol_A 34 VHSY-PHDTKAFTEGFFYRNGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWKNGLGFVW 112 (262)
T ss_dssp EEEE-ECCTTCEEEEEEEETTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEE
T ss_pred EEEe-cCCCCcccceEEEECCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEeeCCEEEEE
Confidence 4444 34333 356888767 666666666 99999999999999988766555543444566666 4448899999
Q ss_pred ecCCceeeeeccCCccceeeeeccCCCeEEEecCCCcEEEEEcCCcceeeecccc--C---CceeEEEeCCCCeEEEEeC
Q 022324 178 RRNGLRSVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMH--C---APVTSLSLSEDQLIISGSS 252 (299)
Q Consensus 178 d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~--~---~~i~~~~~~~~~~l~~~~~ 252 (299)
|..+.+.+-....... ...+++++..|+....++.|.++|..+.+.+..+... . ..++.+.+..++.++..-.
T Consensus 113 D~~t~~~~~ti~~~~e--G~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~~G~lyan~w~ 190 (262)
T 3nol_A 113 NIRNLRQVRSFNYDGE--GWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWVDGEIFANVWQ 190 (262)
T ss_dssp ETTTCCEEEEEECSSC--CCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEETTEEEEEETT
T ss_pred ECccCcEEEEEECCCC--ceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEECCEEEEEEcc
Confidence 9988763332222211 2356677888777777888999999999888777532 1 3345677764466666667
Q ss_pred CCcEEEEeCCCCceEEEeeccC----------CCCcEEEEEccCCCCeE-Eeeeccc
Q 022324 253 LGSIAISGLSSDQRVATLRSTD----------CTGHIICLMYPQFLHML-FFLCFLP 298 (299)
Q Consensus 253 dg~i~iwd~~~~~~~~~~~~~~----------~~~~i~~~~~s~~g~~l-~s~s~~~ 298 (299)
++.|.+.|.++++.+..+.... .....+.+||+|+++.| ++|-.+|
T Consensus 191 ~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~Wp 247 (262)
T 3nol_A 191 TNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKLWP 247 (262)
T ss_dssp SSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETTCS
T ss_pred CCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCCCC
Confidence 8899999999999998886531 01156999999976655 4554443
No 186
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.26 E-value=2.2e-09 Score=85.67 Aligned_cols=180 Identities=6% Similarity=-0.063 Sum_probs=119.2
Q ss_pred cCeeEEEe-cCCEEEEEeCCCcEEEEecCCceeEEEecC-C-CceeEEEEecCCCEEE-EEcCCeEEEEecCCceeeeec
Q 022324 113 VGVDQCRM-KRGLILTGVGDKVMRLWSLEGYKCVEEYSL-P-NAASLVDFDFDESKIV-GLIGTRICIWRRNGLRSVFPS 188 (299)
Q Consensus 113 ~~i~~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~-~-~~~~~~~~~~~~~~l~-~~~d~~i~v~d~~~~~~~~~~ 188 (299)
..+.++++ +++.++.+..++.|.+||....... .+.. . ..+..+++++++++++ ...++.|.+|+..+.......
T Consensus 67 ~~p~~i~~~~~g~l~v~~~~~~i~~~d~~~~~~~-~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~ 145 (270)
T 1rwi_B 67 YQPQGLAVDGAGTVYVTDFNNRVVTLAAGSNNQT-VLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLP 145 (270)
T ss_dssp CSCCCEEECTTCCEEEEETTTEEEEECTTCSCCE-ECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECC
T ss_pred CCcceeEECCCCCEEEEcCCCEEEEEeCCCceEe-eeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeec
Confidence 45677888 5554444444889999998765443 2322 2 3455699999998777 456789999987655432221
Q ss_pred cCC-ccceeeeeccCCCeEEEecCCCcEEEEEcCCcceeeeccccCCceeEEEeCCC-CeEEEEeCCCcEEEEeCCCCce
Q 022324 189 REG-TFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGSSLGSIAISGLSSDQR 266 (299)
Q Consensus 189 ~~~-~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~ 266 (299)
... .....+++.+++..+++...++.|.+||............+...+..++++++ .++++...++.|.+||......
T Consensus 146 ~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~ 225 (270)
T 1rwi_B 146 FTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTS 225 (270)
T ss_dssp CCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCC
T ss_pred cccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcc
Confidence 111 12234677887776666667789999998866554333333366889999998 7777777789999999865543
Q ss_pred EEEeeccCCCCcEEEEEccCCCCeEEeee
Q 022324 267 VATLRSTDCTGHIICLMYPQFLHMLFFLC 295 (299)
Q Consensus 267 ~~~~~~~~~~~~i~~~~~s~~g~~l~s~s 295 (299)
......... .+.+++++++|+++++.+
T Consensus 226 ~~~~~~~~~--~p~~i~~~~~g~l~v~~~ 252 (270)
T 1rwi_B 226 TVLPFTGLN--TPLAVAVDSDRTVYVADR 252 (270)
T ss_dssp EECCCCSCS--CEEEEEECTTCCEEEEEG
T ss_pred eeeccCCCC--CceeEEECCCCCEEEEEC
Confidence 322212223 689999999998666654
No 187
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.25 E-value=5.7e-09 Score=84.73 Aligned_cols=181 Identities=8% Similarity=0.050 Sum_probs=121.0
Q ss_pred cccCeeEEEe-cCCEEEEEeCCCcEEEEecCCceeEEEecCC-----CceeEEEEecCCCEEEEEc------------CC
Q 022324 111 HSVGVDQCRM-KRGLILTGVGDKVMRLWSLEGYKCVEEYSLP-----NAASLVDFDFDESKIVGLI------------GT 172 (299)
Q Consensus 111 h~~~i~~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-----~~~~~~~~~~~~~~l~~~~------------d~ 172 (299)
....+.++.+ +++.|+.+. ++.|.+||.++++........ .....+++++++++.+++. .+
T Consensus 52 ~~~~~~~i~~~~dG~l~v~~-~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~ 130 (297)
T 3g4e_A 52 MDAPVSSVALRQSGGYVATI-GTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQG 130 (297)
T ss_dssp CSSCEEEEEEBTTSSEEEEE-TTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCE
T ss_pred CCCceEEEEECCCCCEEEEE-CCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCc
Confidence 3467888888 566444444 568999999888754433321 1233489999999777442 23
Q ss_pred eEEEEecCCceeeeeccCCccceeeeeccCCCeE-EEecCCCcEEEEEc--CCcce-----eeeccccCCceeEEEeCCC
Q 022324 173 RICIWRRNGLRSVFPSREGTFMKGLCMRYFDPEA-VVGCEDGTARVFDM--YSRKC-----SQIIRMHCAPVTSLSLSED 244 (299)
Q Consensus 173 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~s~~~d~~i~iwd~--~~~~~-----~~~~~~~~~~i~~~~~~~~ 244 (299)
.|+.++............ .....+++++++..+ ++.+.++.|.+||+ .++.. ...+..+...+..++++++
T Consensus 131 ~l~~~d~~g~~~~~~~~~-~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~ 209 (297)
T 3g4e_A 131 ALYSLFPDHHVKKYFDQV-DISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAE 209 (297)
T ss_dssp EEEEECTTSCEEEEEEEE-SBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTT
T ss_pred EEEEEECCCCEEEEeecc-ccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCC
Confidence 455555443322221111 122357899999875 55666789999987 44443 2223233456889999998
Q ss_pred -CeEEEEeCCCcEEEEeCCCCceEEEeeccCCCCcEEEEEcc-CCCCeEEeee
Q 022324 245 -QLIISGSSLGSIAISGLSSDQRVATLRSTDCTGHIICLMYP-QFLHMLFFLC 295 (299)
Q Consensus 245 -~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s-~~g~~l~s~s 295 (299)
++.++...++.|..||..+++.+..+..+.. .+++++|. |+++.|+.++
T Consensus 210 G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~~--~~t~~~f~g~d~~~L~vt~ 260 (297)
T 3g4e_A 210 GKLWVACYNGGRVIRLDPVTGKRLQTVKLPVD--KTTSCCFGGKNYSEMYVTC 260 (297)
T ss_dssp SCEEEEEETTTEEEEECTTTCCEEEEEECSSS--BEEEEEEESGGGCEEEEEE
T ss_pred CCEEEEEcCCCEEEEEcCCCceEEEEEECCCC--CceEEEEeCCCCCEEEEEc
Confidence 7777777788899999999999999987765 79999998 8888776554
No 188
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.24 E-value=8.9e-10 Score=100.43 Aligned_cols=184 Identities=6% Similarity=0.003 Sum_probs=119.4
Q ss_pred cccCeeEEEe-cCC-EEEEEeCC-C----cEEEEecCCceeEEEecCCCceeEEEEecCCCEEE-EEcCCe---------
Q 022324 111 HSVGVDQCRM-KRG-LILTGVGD-K----VMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIV-GLIGTR--------- 173 (299)
Q Consensus 111 h~~~i~~~~~-~~~-~l~s~~~d-g----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~d~~--------- 173 (299)
|+..+..+.| |++ +|+.++.+ | .|++||+.+++.+.....+.....++|+||++.|+ ++.++.
T Consensus 123 ~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~ 202 (710)
T 2xdw_A 123 GTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTET 202 (710)
T ss_dssp SCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEEECSCCEEECTTSSEEEEEECCCCSSCCSSSCC
T ss_pred CCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccCcccceEEEEeCCCEEEEEEECCcccccccccc
Confidence 4446777888 676 66655443 3 89999999998776433222234599999999988 776655
Q ss_pred -------EEEEecCCce----eeeeccC-CccceeeeeccCCCeEEEecC-----CCcEEEEEcCC------cc-eeeec
Q 022324 174 -------ICIWRRNGLR----SVFPSRE-GTFMKGLCMRYFDPEAVVGCE-----DGTARVFDMYS------RK-CSQII 229 (299)
Q Consensus 174 -------i~v~d~~~~~----~~~~~~~-~~~~~~~~~~~~~~~l~s~~~-----d~~i~iwd~~~------~~-~~~~~ 229 (299)
|++|++.++. .++.... ........+++++.+|+..+. +..|.+||+.+ +. ....+
T Consensus 203 ~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l 282 (710)
T 2xdw_A 203 STNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKL 282 (710)
T ss_dssp CCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEE
T ss_pred ccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEe
Confidence 9999998765 2223221 111224689999999776543 56899999986 43 34455
Q ss_pred cccCCceeEEEeCCC-CeEEEEeC----CCcEEEEeCCCCc--eEEEeeccCCCCcEEEEEccCCCCeEEeee
Q 022324 230 RMHCAPVTSLSLSED-QLIISGSS----LGSIAISGLSSDQ--RVATLRSTDCTGHIICLMYPQFLHMLFFLC 295 (299)
Q Consensus 230 ~~~~~~i~~~~~~~~-~~l~~~~~----dg~i~iwd~~~~~--~~~~~~~~~~~~~i~~~~~s~~g~~l~s~s 295 (299)
..+...+.. .|+|+ +.|+..+. ++.|.+||+.+++ ....+..+.....+..++|++++.++++..
T Consensus 283 ~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~ 354 (710)
T 2xdw_A 283 IDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYL 354 (710)
T ss_dssp ECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEE
T ss_pred eCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEE
Confidence 555555544 36666 55555444 2369999998764 234454443311688899997777777654
No 189
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.24 E-value=3.2e-09 Score=86.56 Aligned_cols=181 Identities=12% Similarity=0.081 Sum_probs=120.5
Q ss_pred cccCeeEEEe-cC-CEEEEEeCCCcEEEEecCCceeEEE-ecCC-----CceeEEEEecCCCEEEEE-cC----------
Q 022324 111 HSVGVDQCRM-KR-GLILTGVGDKVMRLWSLEGYKCVEE-YSLP-----NAASLVDFDFDESKIVGL-IG---------- 171 (299)
Q Consensus 111 h~~~i~~~~~-~~-~~l~s~~~dg~i~iwd~~~~~~~~~-~~~~-----~~~~~~~~~~~~~~l~~~-~d---------- 171 (299)
+...+..+.+ ++ +.|..++.++.|.+||.. ++.... .... ..+..+++++++++.++. .+
T Consensus 69 ~~~~~~~i~~~~~~g~l~v~~~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~ 147 (314)
T 1pjx_A 69 YGGIPAGCQCDRDANQLFVADMRLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRS 147 (314)
T ss_dssp EECCEEEEEECSSSSEEEEEETTTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBT
T ss_pred CCCCCceEEEecCCCcEEEEECCCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCccccccccccc
Confidence 4567888888 66 666666655689999988 765443 2211 124459999999887744 33
Q ss_pred -----CeEEEEecCCceeeeeccCCccceeeeec----cCCCeEE-EecCCCcEEEEEcC-Ccc-----eeeeccccC-C
Q 022324 172 -----TRICIWRRNGLRSVFPSREGTFMKGLCMR----YFDPEAV-VGCEDGTARVFDMY-SRK-----CSQIIRMHC-A 234 (299)
Q Consensus 172 -----~~i~v~d~~~~~~~~~~~~~~~~~~~~~~----~~~~~l~-s~~~d~~i~iwd~~-~~~-----~~~~~~~~~-~ 234 (299)
+.|..++.......+...... ...+++. +++..++ +...++.|.+||.. +++ ....+..+. .
T Consensus 148 ~~~~~~~l~~~~~~g~~~~~~~~~~~-~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~ 226 (314)
T 1pjx_A 148 MQEKFGSIYCFTTDGQMIQVDTAFQF-PNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEG 226 (314)
T ss_dssp TSSSCEEEEEECTTSCEEEEEEEESS-EEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSC
T ss_pred ccCCCCeEEEECCCCCEEEeccCCCC-cceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCC
Confidence 577788766322222111111 2245677 7776654 44567899999986 343 222333333 5
Q ss_pred ceeEEEeCCC-CeEEEEeCCCcEEEEeCCCCceEEEeeccCCCCcEEEEEccCCCCeEEeee
Q 022324 235 PVTSLSLSED-QLIISGSSLGSIAISGLSSDQRVATLRSTDCTGHIICLMYPQFLHMLFFLC 295 (299)
Q Consensus 235 ~i~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~s~s 295 (299)
.+..++++++ +++++...++.|.+||..+++.+..+..+.. .+.+++|+|+|+.|..++
T Consensus 227 ~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~--~~~~i~~~~dg~~l~v~~ 286 (314)
T 1pjx_A 227 GADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRCPFE--KPSNLHFKPQTKTIFVTE 286 (314)
T ss_dssp EEEEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEECSSS--CEEEEEECTTSSEEEEEE
T ss_pred CCCceEECCCCCEEEEEcCCCEEEEEcCCCCcEeEEEeCCCC--CceeEEECCCCCEEEEEe
Confidence 6788999998 7777777888999999987887777766655 799999999999666554
No 190
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.24 E-value=9.3e-09 Score=84.68 Aligned_cols=183 Identities=10% Similarity=0.010 Sum_probs=120.2
Q ss_pred ccccCeeEEEe-cCC-EEEEEeCC----CcEEEEecCCceeEEEec---CCCceeEEEEecCCCEEEEEc-------CCe
Q 022324 110 AHSVGVDQCRM-KRG-LILTGVGD----KVMRLWSLEGYKCVEEYS---LPNAASLVDFDFDESKIVGLI-------GTR 173 (299)
Q Consensus 110 ~h~~~i~~~~~-~~~-~l~s~~~d----g~i~iwd~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~-------d~~ 173 (299)
.+...+.++.+ +++ ++++...+ +.|.+||..+++....+. ....+..++++|+++++++.. .+.
T Consensus 84 ~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~ 163 (333)
T 2dg1_A 84 SHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGG 163 (333)
T ss_dssp CSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEE
T ss_pred CCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCce
Confidence 45677899998 566 55555555 689999998877653333 122344599999998877554 356
Q ss_pred EEEEecCCcee-eeeccCCccceeeeeccCCCeE-EEecCCCcEEEEEcCC-cceeee--------ccccCCceeEEEeC
Q 022324 174 ICIWRRNGLRS-VFPSREGTFMKGLCMRYFDPEA-VVGCEDGTARVFDMYS-RKCSQI--------IRMHCAPVTSLSLS 242 (299)
Q Consensus 174 i~v~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~l-~s~~~d~~i~iwd~~~-~~~~~~--------~~~~~~~i~~~~~~ 242 (299)
|+.+|..+.+. .+..... ....+++++++..+ ++...++.|.+||+.+ +..+.. +..+ ..+..++++
T Consensus 164 l~~~~~~~~~~~~~~~~~~-~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~~~i~~d 241 (333)
T 2dg1_A 164 VYYVSPDFRTVTPIIQNIS-VANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGH-EGPDSCCID 241 (333)
T ss_dssp EEEECTTSCCEEEEEEEES-SEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSS-SEEEEEEEB
T ss_pred EEEEeCCCCEEEEeecCCC-cccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCC-CCCCceEEC
Confidence 77777665432 2211111 12346788888865 4555678999999863 332221 1111 367889999
Q ss_pred CC-CeEEEEeCCCcEEEEeCCCCceEEEeeccCC----CCcEEEEEccCCCCeEEeee
Q 022324 243 ED-QLIISGSSLGSIAISGLSSDQRVATLRSTDC----TGHIICLMYPQFLHMLFFLC 295 (299)
Q Consensus 243 ~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~----~~~i~~~~~s~~g~~l~s~s 295 (299)
++ +++++...++.|.+||. +++.+..+..+.. ...+.+++|+|+++.|+.++
T Consensus 242 ~~G~l~v~~~~~~~v~~~d~-~g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~ 298 (333)
T 2dg1_A 242 SDDNLYVAMYGQGRVLVFNK-RGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICS 298 (333)
T ss_dssp TTCCEEEEEETTTEEEEECT-TSCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEE
T ss_pred CCCCEEEEEcCCCEEEEECC-CCCEEEEEEcCCCccccccCcceEEECCCCCEEEEEe
Confidence 98 77777777899999998 5777777754421 00478999999987776554
No 191
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.24 E-value=9.9e-09 Score=84.52 Aligned_cols=186 Identities=9% Similarity=0.045 Sum_probs=122.2
Q ss_pred eEEeeccccCeeEEEe-cCC-EEEEEeCCCcEEEEecCCceeEEEec-CCCceeEEEEecCCCEEEEEc-C----CeEEE
Q 022324 105 IDQWKAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEYS-LPNAASLVDFDFDESKIVGLI-G----TRICI 176 (299)
Q Consensus 105 ~~~~~~h~~~i~~~~~-~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~-d----~~i~v 176 (299)
...+..+...+.++.| +++ +++++..++.|.+||..+++...... ....+..++++++++++++.. + +.|.+
T Consensus 37 ~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~ 116 (333)
T 2dg1_A 37 WLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFA 116 (333)
T ss_dssp EEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEE
T ss_pred eEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEE
Confidence 3445566677788888 556 66678889999999999887665443 334556699999999887544 4 58999
Q ss_pred EecCCceee--eec-cCCccceeeeeccCCCeEEEecC------CCcEEEEEcCCcceeeeccccCCceeEEEeCCC-Ce
Q 022324 177 WRRNGLRSV--FPS-REGTFMKGLCMRYFDPEAVVGCE------DGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QL 246 (299)
Q Consensus 177 ~d~~~~~~~--~~~-~~~~~~~~~~~~~~~~~l~s~~~------d~~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~-~~ 246 (299)
||..+.... ... ........+++.+++..+++... .+.|..+|..+++... +......+..++++|+ +.
T Consensus 117 ~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~i~~~~dg~~ 195 (333)
T 2dg1_A 117 ATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTP-IIQNISVANGIALSTDEKV 195 (333)
T ss_dssp ECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEE-EEEEESSEEEEEECTTSSE
T ss_pred EeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEE-eecCCCcccceEECCCCCE
Confidence 998876532 221 11222224577777766655543 3556667766544433 2233345789999998 64
Q ss_pred E-EEEeCCCcEEEEeCCC-CceEEEe--------eccCCCCcEEEEEccCCCCeEEee
Q 022324 247 I-ISGSSLGSIAISGLSS-DQRVATL--------RSTDCTGHIICLMYPQFLHMLFFL 294 (299)
Q Consensus 247 l-~~~~~dg~i~iwd~~~-~~~~~~~--------~~~~~~~~i~~~~~s~~g~~l~s~ 294 (299)
+ ++.+.++.|.+||+.+ ++.+..+ ..+ . .+..++++++|+++++.
T Consensus 196 l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~--~~~~i~~d~~G~l~v~~ 250 (333)
T 2dg1_A 196 LWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGH-E--GPDSCCIDSDDNLYVAM 250 (333)
T ss_dssp EEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSS-S--EEEEEEEBTTCCEEEEE
T ss_pred EEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCC-C--CCCceEECCCCCEEEEE
Confidence 4 5556688999999964 4333221 111 2 68889999999877765
No 192
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=99.23 E-value=1.4e-08 Score=78.81 Aligned_cols=191 Identities=12% Similarity=0.040 Sum_probs=131.4
Q ss_pred eEEeecccc--CeeEEEecCC-EEEEEeCCC--cEEEEecCCceeEEEecCCCceeEEEEecCCCEEE--EEcCCeEEEE
Q 022324 105 IDQWKAHSV--GVDQCRMKRG-LILTGVGDK--VMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIV--GLIGTRICIW 177 (299)
Q Consensus 105 ~~~~~~h~~--~i~~~~~~~~-~l~s~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~~d~~i~v~ 177 (299)
+.++ .|.. -...+.|.++ +..+.+.+| .|+.+|+.+++.+..+..+.......+...++.|. .-.++.+.+|
T Consensus 12 ~~~~-phd~~~ftqGL~~~~~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~~~v~v~ 90 (243)
T 3mbr_X 12 VKRY-PHDTTAFTEGLFYLRGHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRNHEGFVY 90 (243)
T ss_dssp EEEE-ECCTTCCEEEEEEETTEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEE
T ss_pred EEEc-CCCCccccccEEEECCEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeCCEEEEE
Confidence 3444 4543 3557888777 555666654 89999999999999988776655433334455655 5558899999
Q ss_pred ecCCceeeeeccCCccceeeeeccCCCeEEEecCCCcEEEEEcCCcceeeeccccC-----CceeEEEeCCCCeEEEEeC
Q 022324 178 RRNGLRSVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHC-----APVTSLSLSEDQLIISGSS 252 (299)
Q Consensus 178 d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-----~~i~~~~~~~~~~l~~~~~ 252 (299)
|..+.+.+-....+.. ...+.+++..|+.+..++.|.++|..+.+.+..+.... ..++.+.+..++.++..-.
T Consensus 91 D~~tl~~~~ti~~~~~--Gwglt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~~G~lyanvw~ 168 (243)
T 3mbr_X 91 DLATLTPRARFRYPGE--GWALTSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWVNGELLANVWL 168 (243)
T ss_dssp ETTTTEEEEEEECSSC--CCEEEECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETT
T ss_pred ECCcCcEEEEEeCCCC--ceEEeeCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEeCCEEEEEECC
Confidence 9998764332222221 23556777777777778999999999998887776321 3456777765566666657
Q ss_pred CCcEEEEeCCCCceEEEeeccC-----------CCCcEEEEEccCCCC-eEEeeeccc
Q 022324 253 LGSIAISGLSSDQRVATLRSTD-----------CTGHIICLMYPQFLH-MLFFLCFLP 298 (299)
Q Consensus 253 dg~i~iwd~~~~~~~~~~~~~~-----------~~~~i~~~~~s~~g~-~l~s~s~~~ 298 (299)
+..|.+.|.++++.+..+.... .....+.++++|+++ ++++|-.+|
T Consensus 169 s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK~wp 226 (243)
T 3mbr_X 169 TSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGKRWP 226 (243)
T ss_dssp TTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEETTCS
T ss_pred CCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECCCCC
Confidence 8899999999999998886321 112679999999655 555555443
No 193
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.23 E-value=2.7e-09 Score=97.27 Aligned_cols=201 Identities=6% Similarity=-0.070 Sum_probs=131.8
Q ss_pred hhhhccccceeec-----Cce--eeEEeecc----------ccCeeEEEe-cCC-EEEEEeCCCc---------------
Q 022324 88 ELAMKHHRFALEE-----GRI--DIDQWKAH----------SVGVDQCRM-KRG-LILTGVGDKV--------------- 133 (299)
Q Consensus 88 ~~~~~~~~~~l~~-----g~~--~~~~~~~h----------~~~i~~~~~-~~~-~l~s~~~dg~--------------- 133 (299)
...++|+++.++- |.. .++.+.-. ...+..+.| +++ .|+.++.++.
T Consensus 129 ~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~ 208 (710)
T 2xdw_A 129 GYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQ 208 (710)
T ss_dssp EEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEEECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCC
T ss_pred EEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccCcccceEEEEeCCCEEEEEEECCccccccccccccCCCC
Confidence 4577888877763 221 23333211 122455778 676 7888877766
Q ss_pred -EEEEecCCcee--EEEecC--CC-ceeEEEEecCCCEEE-EEc-----CCeEEEEecCC------c---eeeeeccCCc
Q 022324 134 -MRLWSLEGYKC--VEEYSL--PN-AASLVDFDFDESKIV-GLI-----GTRICIWRRNG------L---RSVFPSREGT 192 (299)
Q Consensus 134 -i~iwd~~~~~~--~~~~~~--~~-~~~~~~~~~~~~~l~-~~~-----d~~i~v~d~~~------~---~~~~~~~~~~ 192 (299)
|++|++.+++. ...+.. +. ....+.|+|++++|+ .+. +..|++||+.+ + ...+..+...
T Consensus 209 ~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~ 288 (710)
T 2xdw_A 209 KLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEG 288 (710)
T ss_dssp EEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSS
T ss_pred EEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCc
Confidence 99999988762 222332 22 345699999999988 554 56899999975 3 2333333332
Q ss_pred cceeeeeccCCCeEEEecC----CCcEEEEEcCCcce--eeeccccCC--ceeEEEeCCC-CeEEEEeCCCc--EEEEeC
Q 022324 193 FMKGLCMRYFDPEAVVGCE----DGTARVFDMYSRKC--SQIIRMHCA--PVTSLSLSED-QLIISGSSLGS--IAISGL 261 (299)
Q Consensus 193 ~~~~~~~~~~~~~l~s~~~----d~~i~iwd~~~~~~--~~~~~~~~~--~i~~~~~~~~-~~l~~~~~dg~--i~iwd~ 261 (299)
.. ..+.+++..++..+. ...|.+||+.++.. ...+..+.. .+..++++++ .++++...|+. |.+||+
T Consensus 289 ~~--~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~ 366 (710)
T 2xdw_A 289 EY--DYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDL 366 (710)
T ss_dssp CE--EEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEET
T ss_pred EE--EEEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEEC
Confidence 22 247778888665443 33699999987642 234434433 6888999866 77888888874 667788
Q ss_pred CCCceEEEeeccCCCCcEEEEEccCCCCeEE
Q 022324 262 SSDQRVATLRSTDCTGHIICLMYPQFLHMLF 292 (299)
Q Consensus 262 ~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~ 292 (299)
.+++.+..+..+.. .+..++++|+++.++
T Consensus 367 ~~g~~~~~l~~~~~--~v~~~~~s~d~~~l~ 395 (710)
T 2xdw_A 367 ATGALLKIFPLEVG--SVVGYSGQKKDTEIF 395 (710)
T ss_dssp TTCCEEEEECCCSS--EEEEEECCTTCSEEE
T ss_pred CCCCEEEecCCCCc--eEEEEecCCCCCEEE
Confidence 77888888877755 899999999987665
No 194
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.20 E-value=8.2e-09 Score=81.60 Aligned_cols=180 Identities=8% Similarity=-0.040 Sum_probs=124.2
Q ss_pred eeEEEe-cCCEEEEEe-C--CCcEEEEecCCceeEEEecCCCceeEEEEecCCCEEE--EEcCCeEEEEecCCceeeeec
Q 022324 115 VDQCRM-KRGLILTGV-G--DKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIV--GLIGTRICIWRRNGLRSVFPS 188 (299)
Q Consensus 115 i~~~~~-~~~~l~s~~-~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~~d~~i~v~d~~~~~~~~~~ 188 (299)
...+.+ +++.|+.++ . ++.|.+.|..+++.+..+..........+..+++.++ .-.++.+.++|..+.+.+-..
T Consensus 23 ~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~~~~~v~viD~~t~~v~~~i 102 (266)
T 2iwa_A 23 TQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVVWLKNIGFIYDRRTLSNIKNF 102 (266)
T ss_dssp EEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEETTCSEEEEEETTTTEEEEEE
T ss_pred cccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEEecCCEEEEEECCCCcEEEEE
Confidence 567888 446444443 2 5899999999999999887554333333333455665 445789999999987643332
Q ss_pred cCCccceeeeeccCCCeEEEecCCCcEEEEEcCCcceeeeccccC-----CceeEEEeCCCCeEEEEeCCCcEEEEeCCC
Q 022324 189 REGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHC-----APVTSLSLSEDQLIISGSSLGSIAISGLSS 263 (299)
Q Consensus 189 ~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-----~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~ 263 (299)
..+ ......+.+++..++.+..++.|.++|..+.+.+..+.... ..++.+.+..+..++....++.|.+.|..+
T Consensus 103 ~~g-~~~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~dg~lyvn~~~~~~V~vID~~t 181 (266)
T 2iwa_A 103 THQ-MKDGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYINGEVWANIWQTDCIARISAKD 181 (266)
T ss_dssp ECC-SSSCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTSSEEEEEETTT
T ss_pred ECC-CCCeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEECCEEEEecCCCCeEEEEECCC
Confidence 222 11124577788887777788999999999988887776321 136778887436566666789999999999
Q ss_pred CceEEEeeccC-----------CCCcEEEEEccCCCCeEEeee
Q 022324 264 DQRVATLRSTD-----------CTGHIICLMYPQFLHMLFFLC 295 (299)
Q Consensus 264 ~~~~~~~~~~~-----------~~~~i~~~~~s~~g~~l~s~s 295 (299)
++.+.++.... .....+.++|+|+++.|++++
T Consensus 182 g~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTg 224 (266)
T 2iwa_A 182 GTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTG 224 (266)
T ss_dssp CCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEE
T ss_pred CcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEEC
Confidence 99999886431 001568999999987666554
No 195
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.20 E-value=6.3e-09 Score=81.38 Aligned_cols=181 Identities=8% Similarity=0.012 Sum_probs=128.1
Q ss_pred eeEEEecCC-EEEEEeCCCcEEEEecCCceeEEEecCCCceeEEEEecCCCEEE--EEcCCeEEEEecCCceeeeeccCC
Q 022324 115 VDQCRMKRG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIV--GLIGTRICIWRRNGLRSVFPSREG 191 (299)
Q Consensus 115 i~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~~d~~i~v~d~~~~~~~~~~~~~ 191 (299)
...+.|.++ +.++.+.+|.|+++|+++++.+..+ .+.........++++.|. .-.++.+.+||..+.+.+-.....
T Consensus 57 tqGL~~~~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~~ 135 (268)
T 3nok_A 57 TQGLVFHQGHFFESTGHQGTLRQLSLESAQPVWME-RLGNIFAEGLASDGERLYQLTWTEGLLFTWSGMPPQRERTTRYS 135 (268)
T ss_dssp EEEEEEETTEEEEEETTTTEEEECCSSCSSCSEEE-ECTTCCEEEEEECSSCEEEEESSSCEEEEEETTTTEEEEEEECS
T ss_pred cceEEEECCEEEEEcCCCCEEEEEECCCCcEEeEE-CCCCcceeEEEEeCCEEEEEEccCCEEEEEECCcCcEEEEEeCC
Confidence 356888777 7778888899999999999998887 555444433344555555 445889999999987643322222
Q ss_pred ccceeeeeccCCCeEEEecCCCcEEEEEcCCcceeeecccc--C---CceeEEEeCCCCeEEEEeCCCcEEEEeCCCCce
Q 022324 192 TFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMH--C---APVTSLSLSEDQLIISGSSLGSIAISGLSSDQR 266 (299)
Q Consensus 192 ~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~--~---~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~ 266 (299)
.. ...+.+++..|+.+..++.|.++|..+.+.+..+... . ..++.+.|..++.++....++.|.+.|.++++.
T Consensus 136 ~e--GwGLt~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~dG~lyanvw~s~~I~vIDp~TG~V 213 (268)
T 3nok_A 136 GE--GWGLCYWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECANGVIYANIWHSSDVLEIDPATGTV 213 (268)
T ss_dssp SC--CCCEEEETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTCSEEEEECTTTCBE
T ss_pred Cc--eeEEecCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEeCCEEEEEECCCCeEEEEeCCCCcE
Confidence 11 2355677888887777999999999999888877632 1 245677777556666666788999999999999
Q ss_pred EEEeecc-----------CCCCcEEEEEccCCC-CeEEeeeccc
Q 022324 267 VATLRST-----------DCTGHIICLMYPQFL-HMLFFLCFLP 298 (299)
Q Consensus 267 ~~~~~~~-----------~~~~~i~~~~~s~~g-~~l~s~s~~~ 298 (299)
+..+... ......+.+|++|++ +++++|-++|
T Consensus 214 ~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK~Wp 257 (268)
T 3nok_A 214 VGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGKLWP 257 (268)
T ss_dssp EEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEETTCS
T ss_pred EEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCCCCC
Confidence 9888643 111267999999965 5666665554
No 196
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.20 E-value=3.9e-09 Score=84.14 Aligned_cols=179 Identities=6% Similarity=-0.077 Sum_probs=115.3
Q ss_pred CeeEEEe-cCC-EEE-EEeCCCcEEEEecCCceeEEEecCC-CceeEEEEecCCCEEEEEcCCeEEEEecCCceeeeec-
Q 022324 114 GVDQCRM-KRG-LIL-TGVGDKVMRLWSLEGYKCVEEYSLP-NAASLVDFDFDESKIVGLIGTRICIWRRNGLRSVFPS- 188 (299)
Q Consensus 114 ~i~~~~~-~~~-~l~-s~~~dg~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~d~~i~v~d~~~~~~~~~~- 188 (299)
...++.+ +++ +++ +...++.|.+||..+.........+ ..+..++++++++++++..++.|.+||..+.......
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~i~~~d~~~~~~~~~~~ 104 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDFNNRVVTLAAGSNNQTVLPF 104 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEETTTEEEEECTTCSCCEECCC
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcCCCEEEEEeCCCceEeeeec
Confidence 5567777 555 455 4467899999997665433221122 3455599999998766655889999998876432211
Q ss_pred cCCccceeeeeccCCCeEEEecCCCcEEEEEcCCcceeeeccccCCceeEEEeCCC-CeEEEEeCCCcEEEEeCCCCceE
Q 022324 189 REGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGSSLGSIAISGLSSDQRV 267 (299)
Q Consensus 189 ~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~ 267 (299)
........+++.+++..+++...++.|.+|+..+.............+..++++++ +++++...++.|.+||.......
T Consensus 105 ~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~ 184 (270)
T 1rwi_B 105 DGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQV 184 (270)
T ss_dssp CSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEE
T ss_pred CCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceE
Confidence 11122334677777776666667889999987654433322233346788999998 87777777889999998766544
Q ss_pred EEeeccCCCCcEEEEEccCCCCeEEee
Q 022324 268 ATLRSTDCTGHIICLMYPQFLHMLFFL 294 (299)
Q Consensus 268 ~~~~~~~~~~~i~~~~~s~~g~~l~s~ 294 (299)
........ .+.+++++++|.++++.
T Consensus 185 ~~~~~~~~--~p~~i~~d~~g~l~v~~ 209 (270)
T 1rwi_B 185 VLPFTDIT--APWGIAVDEAGTVYVTE 209 (270)
T ss_dssp ECCCSSCC--SEEEEEECTTCCEEEEE
T ss_pred eecccCCC--CceEEEECCCCCEEEEE
Confidence 33222223 78999999999766654
No 197
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.18 E-value=2.9e-08 Score=81.72 Aligned_cols=178 Identities=8% Similarity=-0.036 Sum_probs=116.6
Q ss_pred ccCeeEEEe-cCCEEEEEeCCCcEEEEecCCceeEEEecCC-----CceeEEEEecCCCEEEEEc-------CCeEEEEe
Q 022324 112 SVGVDQCRM-KRGLILTGVGDKVMRLWSLEGYKCVEEYSLP-----NAASLVDFDFDESKIVGLI-------GTRICIWR 178 (299)
Q Consensus 112 ~~~i~~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-----~~~~~~~~~~~~~~l~~~~-------d~~i~v~d 178 (299)
...+.++.+ +++.++.++.+ .|.+||..+++........ ..+..+.+++++++.+++. .+.|+.++
T Consensus 89 ~~~v~~i~~~~dg~l~v~~~~-gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~ 167 (326)
T 2ghs_A 89 PFMGSALAKISDSKQLIASDD-GLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA 167 (326)
T ss_dssp SSCEEEEEEEETTEEEEEETT-EEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE
T ss_pred CCcceEEEEeCCCeEEEEECC-CEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe
Confidence 457888888 67744445544 4999999888754433221 1233489999999777543 25677777
Q ss_pred cCCceeeeeccCCccceeeeeccCCCeEE-EecCCCcEEEEEcC--Cc-ce-----eeeccccCCceeEEEeCCC-CeEE
Q 022324 179 RNGLRSVFPSREGTFMKGLCMRYFDPEAV-VGCEDGTARVFDMY--SR-KC-----SQIIRMHCAPVTSLSLSED-QLII 248 (299)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-s~~~d~~i~iwd~~--~~-~~-----~~~~~~~~~~i~~~~~~~~-~~l~ 248 (299)
......+.... .....+++++++..++ +...++.|.+||+. ++ +. ...+......+..++++++ .+++
T Consensus 168 -~g~~~~~~~~~-~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwv 245 (326)
T 2ghs_A 168 -KGKVTKLFADI-SIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWN 245 (326)
T ss_dssp -TTEEEEEEEEE-SSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEE
T ss_pred -CCcEEEeeCCC-cccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEE
Confidence 32222221111 1223568889988754 45567899999986 55 32 2222223456788999988 7666
Q ss_pred EEeCCCcEEEEeCCCCceEEEeeccCCCCcEEEEEcc-CCCCeEEeee
Q 022324 249 SGSSLGSIAISGLSSDQRVATLRSTDCTGHIICLMYP-QFLHMLFFLC 295 (299)
Q Consensus 249 ~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s-~~g~~l~s~s 295 (299)
+...++.|..||. +++.+..+..+.. .+++++|+ |+++.|+.++
T Consensus 246 a~~~~~~v~~~d~-~g~~~~~i~~~~~--~~~~~af~g~d~~~L~vt~ 290 (326)
T 2ghs_A 246 ARWGEGAVDRYDT-DGNHIARYEVPGK--QTTCPAFIGPDASRLLVTS 290 (326)
T ss_dssp EEETTTEEEEECT-TCCEEEEEECSCS--BEEEEEEESTTSCEEEEEE
T ss_pred EEeCCCEEEEECC-CCCEEEEEECCCC--CcEEEEEecCCCCEEEEEe
Confidence 6666788999998 6888888876665 79999998 8888776554
No 198
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.16 E-value=8.8e-09 Score=85.26 Aligned_cols=164 Identities=10% Similarity=0.067 Sum_probs=108.8
Q ss_pred eeEEEe-cCC-EEEEEeC---------------------------CCcEEEEecCCceeEEEecCCCceeEEEEecCCCE
Q 022324 115 VDQCRM-KRG-LILTGVG---------------------------DKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESK 165 (299)
Q Consensus 115 i~~~~~-~~~-~l~s~~~---------------------------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (299)
+..+.| |++ .|+.++. ...|.+||+.+++.+..+... .+..+.|+|++ +
T Consensus 106 ~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~~-~~~~~~~spdg-~ 183 (347)
T 2gop_A 106 IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEKP-RFSSGIWHRDK-I 183 (347)
T ss_dssp EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEEE-TTCEEEEETTE-E
T ss_pred ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecCC-CcccccCCCCe-E
Confidence 888888 676 6666653 257999999988874444433 55569999999 6
Q ss_pred EE-EEcC---------CeEEEEecCCce-eeeeccCCccceeeeeccCCCeEEEecCC--------CcEEEEEcCCccee
Q 022324 166 IV-GLIG---------TRICIWRRNGLR-SVFPSREGTFMKGLCMRYFDPEAVVGCED--------GTARVFDMYSRKCS 226 (299)
Q Consensus 166 l~-~~~d---------~~i~v~d~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~s~~~d--------~~i~iwd~~~~~~~ 226 (299)
++ +..+ ..|+++| ++. ..+... .. ...++|++..++.++.+ ..|.+|| +++..
T Consensus 184 ~~~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~-~~---~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~ 255 (347)
T 2gop_A 184 VVNVPHREIIPQYFKFWDIYIWE--DGKEEKMFEK-VS---FYAVDSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVM 255 (347)
T ss_dssp EEEEECCCSSCCSSCCEEEEEEE--TTEEEEEEEE-ES---EEEEEECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEE
T ss_pred EEEEecccccccccccccEEEeC--CCceEEeccC-cc---eeeECCCCCEEEEEEccccCCccccceEEEEC--CCceE
Confidence 66 4433 2456666 332 222222 22 23448889887766543 3688888 56555
Q ss_pred eeccccCCceeE-EEeCCCCeEEEEeCCCcEEEEeCCCCceEEEeeccCCCCcEEEEEccCCCCeEEeee
Q 022324 227 QIIRMHCAPVTS-LSLSEDQLIISGSSLGSIAISGLSSDQRVATLRSTDCTGHIICLMYPQFLHMLFFLC 295 (299)
Q Consensus 227 ~~~~~~~~~i~~-~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~s~s 295 (299)
.....+...+.. +.|+ +.++++++.++.+++| +.+++..... .+.. .|.+++|+| .++++++
T Consensus 256 ~l~~~~~~~~~~~~~~s-dg~~~~~~~~~~~~l~-~~~g~~~~~~-~~~~--~v~~~~~s~--~~~~~~~ 318 (347)
T 2gop_A 256 GILDEVDRGVGQAKIKD-GKVYFTLFEEGSVNLY-IWDGEIKPIA-KGRH--WIMGFDVDE--IVVYLKE 318 (347)
T ss_dssp ESSTTCCSEEEEEEEET-TEEEEEEEETTEEEEE-EESSSEEEEE-CSSS--EEEEEEESS--SEEEEEE
T ss_pred eccccCCcccCCccEEc-CcEEEEEecCCcEEEE-EcCCceEEEe-cCCC--eEEeeeeeC--cEEEEEc
Confidence 444455677886 8998 6678888899999999 8766654433 3444 899999999 5555554
No 199
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.15 E-value=3.7e-09 Score=87.53 Aligned_cols=169 Identities=12% Similarity=0.018 Sum_probs=107.8
Q ss_pred cCeeEEEe-cCC-EEEEEeCC---C--cEEEEecCCceeEEEecCCCceeEEEEecCCCEEE-EEcC-------------
Q 022324 113 VGVDQCRM-KRG-LILTGVGD---K--VMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIV-GLIG------------- 171 (299)
Q Consensus 113 ~~i~~~~~-~~~-~l~s~~~d---g--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~d------------- 171 (299)
..+..+.| |++ +|+..+.+ + .|.+|++.+++.......+. +..+.|+|+++.|+ ++.+
T Consensus 59 ~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~ 137 (347)
T 2gop_A 59 ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDV 137 (347)
T ss_dssp ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEESE-EEEEEECTTSSEEEEEEECCCC---------C
T ss_pred ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCCC-ccceeECCCCCEEEEEEccCCCcCCcEEEccc
Confidence 45677888 677 77766643 3 48888888888766655554 55699999999888 5532
Q ss_pred --------------CeEEEEecCCcee--eeeccCCccceeeeeccCCCeEEEecCCC-------cEEEEEcCCcceeee
Q 022324 172 --------------TRICIWRRNGLRS--VFPSREGTFMKGLCMRYFDPEAVVGCEDG-------TARVFDMYSRKCSQI 228 (299)
Q Consensus 172 --------------~~i~v~d~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~s~~~d~-------~i~iwd~~~~~~~~~ 228 (299)
..|++||+.+++. .+.. . .....+|++++ .++++..++ ...+|.+.+++. ..
T Consensus 138 ~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~--~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~~-~~ 212 (347)
T 2gop_A 138 PAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P--RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDGKE-EK 212 (347)
T ss_dssp CCC---------CEEEEEEEETTTTEEEEEEEE-E--TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETTEE-EE
T ss_pred ceeecCcccccCccceEEEEECCCCeEEeeecC-C--CcccccCCCCe-EEEEEecccccccccccccEEEeCCCce-EE
Confidence 5799999987753 2332 2 23346888988 766665432 344554444443 33
Q ss_pred ccccCCceeEEEeCCC-CeEEEEeCC--------CcEEEEeCCCCceEEEeeccCCCCcEEE-EEccCCCCeEEeeec
Q 022324 229 IRMHCAPVTSLSLSED-QLIISGSSL--------GSIAISGLSSDQRVATLRSTDCTGHIIC-LMYPQFLHMLFFLCF 296 (299)
Q Consensus 229 ~~~~~~~i~~~~~~~~-~~l~~~~~d--------g~i~iwd~~~~~~~~~~~~~~~~~~i~~-~~~s~~g~~l~s~s~ 296 (299)
+..+ ..+..+ +|+ +.|+.++.+ ..|.+|| +++.......+.. .+.. +.|+ +| ++++++.
T Consensus 213 l~~~-~~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~--~~~~~~~~s-dg-~~~~~~~ 281 (347)
T 2gop_A 213 MFEK-VSFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDR--GVGQAKIKD-GK-VYFTLFE 281 (347)
T ss_dssp EEEE-ESEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESSTTCCS--EEEEEEEET-TE-EEEEEEE
T ss_pred eccC-cceeeE--CCCCCEEEEEEccccCCccccceEEEEC--CCceEeccccCCc--ccCCccEEc-Cc-EEEEEec
Confidence 3334 445544 888 777776644 3688888 5654433334444 7886 8999 88 7776653
No 200
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.13 E-value=2.3e-09 Score=97.52 Aligned_cols=183 Identities=8% Similarity=-0.027 Sum_probs=115.1
Q ss_pred ccccCeeEEEe-cCC-EEE-----EEeCCCcEEEEecCCceeE-EEecCCCceeEEEEecCCCEEE-EEcCCe-------
Q 022324 110 AHSVGVDQCRM-KRG-LIL-----TGVGDKVMRLWSLEGYKCV-EEYSLPNAASLVDFDFDESKIV-GLIGTR------- 173 (299)
Q Consensus 110 ~h~~~i~~~~~-~~~-~l~-----s~~~dg~i~iwd~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~-~~~d~~------- 173 (299)
+|...+..+.| |++ +|+ .|+.+..|++||+.+++.+ ...........++|+||++.|+ ++.+..
T Consensus 118 ~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~ 197 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDE 197 (695)
T ss_dssp SSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGG
T ss_pred CCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCcccCcccccceEEecCCCEEEEEEecCCCCCcccc
Confidence 45556888888 677 666 3444578999999998864 2111111114599999999988 777665
Q ss_pred ------EEEEecCCce----eeeeccCC-ccceeeeeccCCCeEEEecCCC----cEEEEEcCCcceeeeccccCCceeE
Q 022324 174 ------ICIWRRNGLR----SVFPSREG-TFMKGLCMRYFDPEAVVGCEDG----TARVFDMYSRKCSQIIRMHCAPVTS 238 (299)
Q Consensus 174 ------i~v~d~~~~~----~~~~~~~~-~~~~~~~~~~~~~~l~s~~~d~----~i~iwd~~~~~~~~~~~~~~~~i~~ 238 (299)
|++|++.++. .++..... .......+++++.+++..+.++ .|.++|..+++. ..+..+...+..
T Consensus 198 ~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~-~~l~~~~~~~~~ 276 (695)
T 2bkl_A 198 RPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDF-RLLVKGVGAKYE 276 (695)
T ss_dssp GGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSC-EEEEECSSCCEE
T ss_pred CCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCce-EEeecCCCceEE
Confidence 9999998765 23332222 1223468999999987766555 677777655543 334444555555
Q ss_pred EEeCCCCeEEEEeC----CCcEEEEeCCCCce--EEEeeccCCCCcEEEEEccCCCCeEEeee
Q 022324 239 LSLSEDQLIISGSS----LGSIAISGLSSDQR--VATLRSTDCTGHIICLMYPQFLHMLFFLC 295 (299)
Q Consensus 239 ~~~~~~~~l~~~~~----dg~i~iwd~~~~~~--~~~~~~~~~~~~i~~~~~s~~g~~l~s~s 295 (299)
..+.+++ ++..+. ++.|.+||+.+++. ...+..+.....+..++|+ ++.++++..
T Consensus 277 ~~~~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~ 337 (695)
T 2bkl_A 277 VHAWKDR-FYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYL 337 (695)
T ss_dssp EEEETTE-EEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEE
T ss_pred EEecCCc-EEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEE
Confidence 5564337 444443 57899999987653 2344333211168888888 666666654
No 201
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.13 E-value=1.1e-07 Score=76.55 Aligned_cols=181 Identities=9% Similarity=0.010 Sum_probs=120.0
Q ss_pred eccccCeeEEEe-cCC-EEEEEeCCCcEEEEecCCceeEEEe-c-CCCceeEEEEecCCCEEEEEc-CCeEEEEecCCce
Q 022324 109 KAHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEY-S-LPNAASLVDFDFDESKIVGLI-GTRICIWRRNGLR 183 (299)
Q Consensus 109 ~~h~~~i~~~~~-~~~-~l~s~~~dg~i~iwd~~~~~~~~~~-~-~~~~~~~~~~~~~~~~l~~~~-d~~i~v~d~~~~~ 183 (299)
..+...+.++.+ +++ ++++...++.|.+||.. ++..... . ....+..+++++++.+.++.. ++.|..||.....
T Consensus 11 ~~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~ 89 (299)
T 2z2n_A 11 TNQDTGPYGITVSDKGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKKGII 89 (299)
T ss_dssp CSSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTTSCE
T ss_pred CCcCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCCCcE
Confidence 455567889988 566 44444457899999988 5543322 2 223455699999998877544 7899999987443
Q ss_pred eeeecc-CCccceeeeeccCCCeEEEecCCCcEEEEEcCCcceeee-ccccCCceeEEEeCCC-CeEEEEeCCCcEEEEe
Q 022324 184 SVFPSR-EGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQI-IRMHCAPVTSLSLSED-QLIISGSSLGSIAISG 260 (299)
Q Consensus 184 ~~~~~~-~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~-~~~~~~~i~~~~~~~~-~~l~~~~~dg~i~iwd 260 (299)
..+... .......+++.+++..+++...++.|..||. +++.... .......+..++++++ .++++...++.|..||
T Consensus 90 ~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~ 168 (299)
T 2z2n_A 90 KEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRIT 168 (299)
T ss_dssp EEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEEC
T ss_pred EEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEc
Confidence 333321 1222334566676666666667889999998 5554322 2233456899999988 7777777788999999
Q ss_pred CCCCceEEE-eeccCCCCcEEEEEccCCCCeEEee
Q 022324 261 LSSDQRVAT-LRSTDCTGHIICLMYPQFLHMLFFL 294 (299)
Q Consensus 261 ~~~~~~~~~-~~~~~~~~~i~~~~~s~~g~~l~s~ 294 (299)
. +++.... ...... .+.+++++++|+++++.
T Consensus 169 ~-~g~~~~~~~~~~~~--~~~~i~~~~~g~l~v~~ 200 (299)
T 2z2n_A 169 E-SGDITEFKIPTPAS--GPVGITKGNDDALWFVE 200 (299)
T ss_dssp T-TCCEEEEECSSTTC--CEEEEEECTTSSEEEEE
T ss_pred C-CCcEEEeeCCCCCC--cceeEEECCCCCEEEEc
Confidence 9 6765432 222222 68999999999876654
No 202
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.10 E-value=7.6e-09 Score=94.06 Aligned_cols=201 Identities=10% Similarity=-0.043 Sum_probs=127.6
Q ss_pred hhhhccccceee-----cCc--eeeEEeec---------cccCe--eEEEe-cCC-EEEEEeCCCc-------------E
Q 022324 88 ELAMKHHRFALE-----EGR--IDIDQWKA---------HSVGV--DQCRM-KRG-LILTGVGDKV-------------M 134 (299)
Q Consensus 88 ~~~~~~~~~~l~-----~g~--~~~~~~~~---------h~~~i--~~~~~-~~~-~l~s~~~dg~-------------i 134 (299)
...++|+++.++ .|. ..++.+.- +...+ ..+.| +++ .|+.++.|.. |
T Consensus 125 ~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v 204 (695)
T 2bkl_A 125 TWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTI 204 (695)
T ss_dssp EEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEE
T ss_pred EEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCcccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEE
Confidence 557889998887 554 23444321 22222 45778 666 8888888776 9
Q ss_pred EEEecCCcee--EEEec--CC-CceeEEEEecCCCEEE-EEcCC----eEEEEecCCce-eeeeccCCccceeeeeccCC
Q 022324 135 RLWSLEGYKC--VEEYS--LP-NAASLVDFDFDESKIV-GLIGT----RICIWRRNGLR-SVFPSREGTFMKGLCMRYFD 203 (299)
Q Consensus 135 ~iwd~~~~~~--~~~~~--~~-~~~~~~~~~~~~~~l~-~~~d~----~i~v~d~~~~~-~~~~~~~~~~~~~~~~~~~~ 203 (299)
++|++.+++. ...+. .+ .....+.|+|+|++|+ ++.++ .|++++..+.. ..+..+....... .+ +++
T Consensus 205 ~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~-~~-~~g 282 (695)
T 2bkl_A 205 RYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGVGAKYEV-HA-WKD 282 (695)
T ss_dssp EEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECSSCCEEE-EE-ETT
T ss_pred EEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCCCceEEE-Ee-cCC
Confidence 9999988762 22333 33 2455699999999988 66555 77777765443 2333333322222 23 455
Q ss_pred CeEEEecC----CCcEEEEEcCCcce--eeeccc-c-CCceeEEEeCCCCeEEEEeCCCcEEEEeCC-CCceEEEeeccC
Q 022324 204 PEAVVGCE----DGTARVFDMYSRKC--SQIIRM-H-CAPVTSLSLSEDQLIISGSSLGSIAISGLS-SDQRVATLRSTD 274 (299)
Q Consensus 204 ~~l~s~~~----d~~i~iwd~~~~~~--~~~~~~-~-~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~-~~~~~~~~~~~~ 274 (299)
. ++..+. ++.|.+||+.+++. ...+.. + ...+..++++.+.++++...|+..++|.+. +++.+..+..+.
T Consensus 283 ~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~ 361 (695)
T 2bkl_A 283 R-FYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIVGGHLSLEYLKDATSEVRVATLKGKPVRTVQLPG 361 (695)
T ss_dssp E-EEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEETTEEEEEEEETTEEEEEEEETTCCEEEECCCSS
T ss_pred c-EEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEECCEEEEEEEECCEEEEEEEeCCCCeeEEecCCC
Confidence 5 444332 57899999987653 223322 2 456788888855888889999988887654 466666666542
Q ss_pred CCCcEEEEEccCCCCeEE
Q 022324 275 CTGHIICLMYPQFLHMLF 292 (299)
Q Consensus 275 ~~~~i~~~~~s~~g~~l~ 292 (299)
.. .+..++++|+++.|+
T Consensus 362 ~~-~v~~~~~s~d~~~l~ 378 (695)
T 2bkl_A 362 VG-AASNLMGLEDLDDAY 378 (695)
T ss_dssp SS-EECCCBSCTTCSEEE
T ss_pred Ce-EEEEeecCCCCCEEE
Confidence 22 788899999987666
No 203
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.09 E-value=6.6e-08 Score=85.32 Aligned_cols=158 Identities=13% Similarity=0.118 Sum_probs=112.4
Q ss_pred CeeEEEe-cCC-EEEEEeCCCcEEEEecC--CceeEEEecCCCceeEEEEe----cCCCEEE--EEcCCeEEEEecCCce
Q 022324 114 GVDQCRM-KRG-LILTGVGDKVMRLWSLE--GYKCVEEYSLPNAASLVDFD----FDESKIV--GLIGTRICIWRRNGLR 183 (299)
Q Consensus 114 ~i~~~~~-~~~-~l~s~~~dg~i~iwd~~--~~~~~~~~~~~~~~~~~~~~----~~~~~l~--~~~d~~i~v~d~~~~~ 183 (299)
.+..+.+ +++ ++++++.|+.|.+||+. +++.+..+........++|+ |++++++ ...++++.++|..+.+
T Consensus 198 ~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~ 277 (567)
T 1qks_A 198 AVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLE 277 (567)
T ss_dssp CEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCC
T ss_pred CccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCCCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCc
Confidence 4456777 666 88889999999999995 88888888877677779999 6999887 4556899999988765
Q ss_pred eeeeccC------------CccceeeeeccCCCe-EEEecCCCcEEEEEcCCcceee--eccccCCceeEEEeCCC-CeE
Q 022324 184 SVFPSRE------------GTFMKGLCMRYFDPE-AVVGCEDGTARVFDMYSRKCSQ--IIRMHCAPVTSLSLSED-QLI 247 (299)
Q Consensus 184 ~~~~~~~------------~~~~~~~~~~~~~~~-l~s~~~d~~i~iwd~~~~~~~~--~~~~~~~~i~~~~~~~~-~~l 247 (299)
.+..... ......+..++.++. ++....+|.|.++|..+.+.+. .+ ........+.|+|+ +++
T Consensus 278 ~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i-~~~~~~~d~~~~pdgr~~ 356 (567)
T 1qks_A 278 PKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEI-SAERFLHDGGLDGSHRYF 356 (567)
T ss_dssp EEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEE-ECCSSEEEEEECTTSCEE
T ss_pred EEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeee-eccccccCceECCCCCEE
Confidence 3221110 111112344555555 5566778999999987654322 22 23445778899999 766
Q ss_pred EEE-eCCCcEEEEeCCCCceEEEeec
Q 022324 248 ISG-SSLGSIAISGLSSDQRVATLRS 272 (299)
Q Consensus 248 ~~~-~~dg~i~iwd~~~~~~~~~~~~ 272 (299)
+++ ..++.|.++|+.+++.+..+..
T Consensus 357 ~va~~~sn~V~ViD~~t~kl~~~i~v 382 (567)
T 1qks_A 357 ITAANARNKLVVIDTKEGKLVAIEDT 382 (567)
T ss_dssp EEEEGGGTEEEEEETTTTEEEEEEEC
T ss_pred EEEeCCCCeEEEEECCCCcEEEEEec
Confidence 554 4688999999999998877765
No 204
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.08 E-value=1.2e-07 Score=80.55 Aligned_cols=179 Identities=7% Similarity=-0.054 Sum_probs=117.3
Q ss_pred CeeEEEe-cCC-EEEEEeCCCcEEEEecCCceeEEEecCCCceeEEEEecCCCEEE-EEcCC--eEEEEecCCcee--ee
Q 022324 114 GVDQCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIV-GLIGT--RICIWRRNGLRS--VF 186 (299)
Q Consensus 114 ~i~~~~~-~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~d~--~i~v~d~~~~~~--~~ 186 (299)
....+++ +++ ++++...++.|++||..+++............ ++++++++.|+ +..++ .|.+++..+... ..
T Consensus 132 ~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~ 210 (409)
T 3hrp_A 132 YMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTRI 210 (409)
T ss_dssp CEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETCCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEEE
T ss_pred CceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccCCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCceeEEe
Confidence 4567788 566 56666667899999999888766655544444 99999999887 65545 899998875532 22
Q ss_pred ---eccCCccceeeeeccCCCeEEEecCCCcEEEEEcCCcceeee----ccccCCce--eEEEeCCC--CeEEEEeCCCc
Q 022324 187 ---PSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQI----IRMHCAPV--TSLSLSED--QLIISGSSLGS 255 (299)
Q Consensus 187 ---~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~----~~~~~~~i--~~~~~~~~--~~l~~~~~dg~ 255 (299)
..........+++++.+..|+.+..++.|..||..++..... .......- ..++|+|+ .++++-..++.
T Consensus 211 g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~ 290 (409)
T 3hrp_A 211 GQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSS 290 (409)
T ss_dssp EECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTE
T ss_pred eeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCCE
Confidence 010122223467888666666677788999999987653222 11222222 39999994 56666667889
Q ss_pred EEEEeCCCCceEEEeeccC---C----------CCcEEEEEccCCCCeEEeee
Q 022324 256 IAISGLSSDQRVATLRSTD---C----------TGHIICLMYPQFLHMLFFLC 295 (299)
Q Consensus 256 i~iwd~~~~~~~~~~~~~~---~----------~~~i~~~~~s~~g~~l~s~s 295 (299)
|+.|+.. ++ +..+.+.. . ......++++|+|+++++-+
T Consensus 291 I~~~~~~-g~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~ 341 (409)
T 3hrp_A 291 VYKITPD-GE-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDG 341 (409)
T ss_dssp EEEECTT-CC-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEET
T ss_pred EEEEecC-CC-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeC
Confidence 9999975 43 33333322 0 11588999999999666643
No 205
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.04 E-value=6.3e-07 Score=72.13 Aligned_cols=179 Identities=10% Similarity=0.023 Sum_probs=117.0
Q ss_pred cccCeeEEEe-cCC-EEEEEeCCCcEEEEecCCceeEEEec---CCCceeEEEEecCCCEEEE-EcCCeEEEEecCCcee
Q 022324 111 HSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEYS---LPNAASLVDFDFDESKIVG-LIGTRICIWRRNGLRS 184 (299)
Q Consensus 111 h~~~i~~~~~-~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~-~~d~~i~v~d~~~~~~ 184 (299)
+...+..+.+ +++ ++++...++.|..||.. ++. ..+. ....+..+++++++++.++ ..++.|..||......
T Consensus 55 ~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~-~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~~g~~~ 132 (299)
T 2z2n_A 55 PDAKVMCLTISSDGEVWFTENAANKIGRITKK-GII-KEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITDDGKIR 132 (299)
T ss_dssp TTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE-EEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTTCCEE
T ss_pred ccCceeeEEECCCCCEEEeCCCCCeEEEECCC-CcE-EEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECCCCCEE
Confidence 4466888888 556 55555557889999976 432 2232 2234555899999988774 4578999999843333
Q ss_pred eeecc-CCccceeeeeccCCCeEEEecCCCcEEEEEcCCcceeee-ccccCCceeEEEeCCC-CeEEEEeCCCcEEEEeC
Q 022324 185 VFPSR-EGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQI-IRMHCAPVTSLSLSED-QLIISGSSLGSIAISGL 261 (299)
Q Consensus 185 ~~~~~-~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~-~~~~~~~i~~~~~~~~-~~l~~~~~dg~i~iwd~ 261 (299)
.+... .......+++.+++..+++...++.|..||. +++.... .......+..++++++ .++++...++.|.+||.
T Consensus 133 ~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~ 211 (299)
T 2z2n_A 133 EYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT 211 (299)
T ss_dssp EEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT
T ss_pred EecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC
Confidence 22221 1222334567777766666666789999998 6665432 2233456889999998 77766667889999999
Q ss_pred CCCceEEEeeccCCCCcEEEEEccCCCCeEEee
Q 022324 262 SSDQRVATLRSTDCTGHIICLMYPQFLHMLFFL 294 (299)
Q Consensus 262 ~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~s~ 294 (299)
+++... +........+.+++++++|+++++.
T Consensus 212 -~g~~~~-~~~~~~~~~~~~i~~~~~g~l~v~~ 242 (299)
T 2z2n_A 212 -SGEITE-FKIPTPNARPHAITAGAGIDLWFTE 242 (299)
T ss_dssp -TCCEEE-EECSSTTCCEEEEEECSTTCEEEEE
T ss_pred -CCcEEE-EECCCCCCCceeEEECCCCCEEEec
Confidence 676433 3222111278999999999866653
No 206
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.03 E-value=9.7e-11 Score=98.27 Aligned_cols=146 Identities=12% Similarity=0.020 Sum_probs=82.0
Q ss_pred cCCEEEEEeCCCcEEEEecCCceeEEEecCCCceeEEEEecCCCEEE-EEcCCeEEEEecCCceeeeeccCC--ccceee
Q 022324 121 KRGLILTGVGDKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIV-GLIGTRICIWRRNGLRSVFPSREG--TFMKGL 197 (299)
Q Consensus 121 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~d~~i~v~d~~~~~~~~~~~~~--~~~~~~ 197 (299)
.++.+++++.||.|+.||..+|+.+..+.. ..+....+..++..++ ++.|+.++.||..+++........ ......
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~-~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~s 86 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE-DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQAS 86 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC-CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTTC
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC-CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCccccccC
Confidence 456899999999999999999999988877 4444444456676666 678999999999876543222111 100000
Q ss_pred eeccCCCeEEEecCCCcEEEEEcCCcceeeeccccCCceeEEEeCCC-CeEEEEeCCCcEEEEeCCCCceEEEee
Q 022324 198 CMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGSSLGSIAISGLSSDQRVATLR 271 (299)
Q Consensus 198 ~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~ 271 (299)
.....+..+++++.++.++.||..+|+.+..+..+.. ..++|+ ..+++++.|+.|+.||.++|+.+..+.
T Consensus 87 p~~~~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~~----~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~ 157 (369)
T 2hz6_A 87 PCRSSDGILYMGKKQDIWYVIDLLTGEKQQTLSSAFA----DSLSPSTSLLYLGRTEYTITMYDTKTRELRWNAT 157 (369)
T ss_dssp SCC-----CCCCEEEEEEEEECCC--------------------------EEEEEEEEEEECCCSSSSSCCCEEE
T ss_pred ceEecCCEEEEEeCCCEEEEEECCCCcEEEEecCCCc----ccccccCCEEEEEecCCEEEEEECCCCCEEEeEe
Confidence 0111345577888899999999999999887764431 334566 788899999999999999998776654
No 207
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.02 E-value=3.5e-07 Score=76.62 Aligned_cols=171 Identities=11% Similarity=0.012 Sum_probs=104.8
Q ss_pred EEEe-cCC-EEEEEe----------CCCcEEEEecCCceeEEEecCC--------CceeEEEEecCCCEEE-EEc--CCe
Q 022324 117 QCRM-KRG-LILTGV----------GDKVMRLWSLEGYKCVEEYSLP--------NAASLVDFDFDESKIV-GLI--GTR 173 (299)
Q Consensus 117 ~~~~-~~~-~l~s~~----------~dg~i~iwd~~~~~~~~~~~~~--------~~~~~~~~~~~~~~l~-~~~--d~~ 173 (299)
.+.+ +++ .++.+. .++.|.+||..+++.+..+... .....+.++|++++|+ +.. ++.
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~ 149 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPA 149 (373)
T ss_pred CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCe
Confidence 6677 666 666654 3678999999999988877643 2234589999999988 553 478
Q ss_pred EEEEecCCceeeee-ccCCccceeeeeccCCCe-EEEecCCCcEEEEEcCCccee-------------------------
Q 022324 174 ICIWRRNGLRSVFP-SREGTFMKGLCMRYFDPE-AVVGCEDGTARVFDMYSRKCS------------------------- 226 (299)
Q Consensus 174 i~v~d~~~~~~~~~-~~~~~~~~~~~~~~~~~~-l~s~~~d~~i~iwd~~~~~~~------------------------- 226 (299)
|.++| .+.+.... ..... +..+.+.++. +++.+.||.+.++|. +++..
T Consensus 150 v~viD-~t~~~~~~~i~~~~---~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 224 (373)
T 2mad_H 150 VGLVV-QGGSSDDQLLSSPT---CYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKS 224 (373)
T ss_pred EEEEE-CCCCEEeEEcCCCc---eEEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecC
Confidence 99999 87754333 21111 0112222221 233333444444443 22221
Q ss_pred -------------------------eeccc----------cCCceeEEEeCCC-CeEEEEeC----------CCcEEEEe
Q 022324 227 -------------------------QIIRM----------HCAPVTSLSLSED-QLIISGSS----------LGSIAISG 260 (299)
Q Consensus 227 -------------------------~~~~~----------~~~~i~~~~~~~~-~~l~~~~~----------dg~i~iwd 260 (299)
..+.. .......+.++|+ +.+.++.. ++.|.++|
T Consensus 225 ~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID 304 (373)
T 2mad_H 225 GRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVT 304 (373)
T ss_pred CEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEE
Confidence 11100 0111233677887 55555432 35799999
Q ss_pred CCCCceEEEeeccCCCCcEEEEEccCCCC-eEEeee
Q 022324 261 LSSDQRVATLRSTDCTGHIICLMYPQFLH-MLFFLC 295 (299)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~i~~~~~s~~g~-~l~s~s 295 (299)
+.+++.+.++.... ...+++|+|||+ +|+++.
T Consensus 305 ~~t~~vv~~i~~g~---~p~~i~~s~Dg~~~l~v~~ 337 (373)
T 2mad_H 305 GLVGQTSSQISLGH---DVDAISVAQDGGPDLYALS 337 (373)
T ss_pred CCCCEEEEEEECCC---CcCeEEECCCCCeEEEEEc
Confidence 99999999996544 589999999999 676654
No 208
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.00 E-value=1.5e-07 Score=76.64 Aligned_cols=179 Identities=9% Similarity=0.018 Sum_probs=112.6
Q ss_pred cccCeeEEEe-cCC-EEEE-------EeCCCcEEEEecCCceeEEEec-----CCCceeEEEEecC-CCEEEEEcCCeEE
Q 022324 111 HSVGVDQCRM-KRG-LILT-------GVGDKVMRLWSLEGYKCVEEYS-----LPNAASLVDFDFD-ESKIVGLIGTRIC 175 (299)
Q Consensus 111 h~~~i~~~~~-~~~-~l~s-------~~~dg~i~iwd~~~~~~~~~~~-----~~~~~~~~~~~~~-~~~l~~~~d~~i~ 175 (299)
.-....++.| +++ ++++ +..++.|.+||..+++...... ....+..++++++ +++++++.++.|.
T Consensus 16 ~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~~~l~ 95 (314)
T 1pjx_A 16 DIPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMRLGLL 95 (314)
T ss_dssp CCTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETTTEEE
T ss_pred cCCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECCCCEE
Confidence 3345567778 555 5555 5778999999988887643322 1134556899999 7666677666899
Q ss_pred EEecCCcee-ee-ec-cCC---ccceeeeeccCCCeEEEecCC---------------CcEEEEEcCCcceeeeccccCC
Q 022324 176 IWRRNGLRS-VF-PS-REG---TFMKGLCMRYFDPEAVVGCED---------------GTARVFDMYSRKCSQIIRMHCA 234 (299)
Q Consensus 176 v~d~~~~~~-~~-~~-~~~---~~~~~~~~~~~~~~l~s~~~d---------------~~i~iwd~~~~~~~~~~~~~~~ 234 (299)
+||.. ++. .+ .. ..+ .....+++.+++..+++...+ +.|..+|.. ++..... .+..
T Consensus 96 ~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~-~~~~ 172 (314)
T 1pjx_A 96 VVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVD-TAFQ 172 (314)
T ss_dssp EEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEE-EEES
T ss_pred EEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEec-cCCC
Confidence 99988 432 22 11 111 112245677777665555444 567777765 5543332 3334
Q ss_pred ceeEEEeC----CC-CeE-EEEeCCCcEEEEeCC-CCc-----eEEEeeccC-CCCcEEEEEccCCCCeEEee
Q 022324 235 PVTSLSLS----ED-QLI-ISGSSLGSIAISGLS-SDQ-----RVATLRSTD-CTGHIICLMYPQFLHMLFFL 294 (299)
Q Consensus 235 ~i~~~~~~----~~-~~l-~~~~~dg~i~iwd~~-~~~-----~~~~~~~~~-~~~~i~~~~~s~~g~~l~s~ 294 (299)
....++++ |+ +.+ ++...++.|.+||+. +++ ....+..+. . .+..++++++|+++++.
T Consensus 173 ~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~--~p~~i~~d~~G~l~v~~ 243 (314)
T 1pjx_A 173 FPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEG--GADGMDFDEDNNLLVAN 243 (314)
T ss_dssp SEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSC--EEEEEEEBTTCCEEEEE
T ss_pred CcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCC--CCCceEECCCCCEEEEE
Confidence 56889999 88 555 444568899999986 443 222233222 3 68899999999887764
No 209
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=98.96 E-value=2e-08 Score=84.02 Aligned_cols=130 Identities=8% Similarity=-0.051 Sum_probs=93.1
Q ss_pred ccccCeeEEEecCC-EEEEEeCCCcEEEEecCCceeEEEecCCCc-eeEEEEecCCCEEE-EEcCCeEEEEecCCceeee
Q 022324 110 AHSVGVDQCRMKRG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNA-ASLVDFDFDESKIV-GLIGTRICIWRRNGLRSVF 186 (299)
Q Consensus 110 ~h~~~i~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~-~~~d~~i~v~d~~~~~~~~ 186 (299)
.+.+ |+.+.| ++ +|+++ .++.|++||+.+.........+.. +..+.+.+. .++ ++.||.+.+||+.+.....
T Consensus 86 ~lp~-V~~l~f-d~~~L~v~-~~~~l~v~dv~sl~~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~ 160 (388)
T 1xip_A 86 EIPD-VIFVCF-HGDQVLVS-TRNALYSLDLEELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQ 160 (388)
T ss_dssp ECTT-EEEEEE-ETTEEEEE-ESSEEEEEESSSTTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEE
T ss_pred eCCC-eeEEEE-CCCEEEEE-cCCcEEEEEchhhhccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCcccc
Confidence 4666 999999 65 88887 889999999886654444443332 333555443 255 9999999999998765332
Q ss_pred eccCCccceeeeeccCCCeEEEecCCCcEEEEEcCCcce--eeec------c---ccCCceeEEEeCCC-CeEEE
Q 022324 187 PSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKC--SQII------R---MHCAPVTSLSLSED-QLIIS 249 (299)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~--~~~~------~---~~~~~i~~~~~~~~-~~l~~ 249 (299)
.. ....++||++.+ ++.|..||.+++|+...++. ..++ . .|...|.++.|.++ .++++
T Consensus 161 --~~-~~Vs~v~WSpkG--~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 161 --LA-QNVTSFDVTNSQ--LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAV 230 (388)
T ss_dssp --EE-ESEEEEEECSSE--EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred --cc-CCceEEEEcCCc--eEEEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEE
Confidence 11 223367888888 78899999999999887664 4455 2 36788999999988 66665
No 210
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=98.93 E-value=2.9e-07 Score=84.28 Aligned_cols=201 Identities=7% Similarity=-0.068 Sum_probs=125.3
Q ss_pred hhhhccccceeecCce-------eeEEeeccccC----------eeEEEe-cCCEEEEEeCCCc--------------EE
Q 022324 88 ELAMKHHRFALEEGRI-------DIDQWKAHSVG----------VDQCRM-KRGLILTGVGDKV--------------MR 135 (299)
Q Consensus 88 ~~~~~~~~~~l~~g~~-------~~~~~~~h~~~----------i~~~~~-~~~~l~s~~~dg~--------------i~ 135 (299)
...++|+++.++-... .++.+.-.++. +..+.| ++..|+.++.++. |+
T Consensus 167 ~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~~~~~~~~~~wspD~~l~~~~~~~~~~~~~~~~~~~~~~v~ 246 (741)
T 1yr2_A 167 AWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADELKWVKFSGLAWLGNDALLYSRFAEPKEGQAFQALNYNQTVW 246 (741)
T ss_dssp EEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEEEEEESCCCEESTTSEEEEEECCCC--------CCCCCEEE
T ss_pred eEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccCCCceeccEEEECCCEEEEEEecCcccccccccCCCCCEEE
Confidence 4577888877654221 24443222211 234567 4466666666554 89
Q ss_pred EEecCCcee--EEEecCCC---ceeEEEEecCCCEEE-EEcCC-----eEEEEecCCc--e--eeeeccCCccceeeeec
Q 022324 136 LWSLEGYKC--VEEYSLPN---AASLVDFDFDESKIV-GLIGT-----RICIWRRNGL--R--SVFPSREGTFMKGLCMR 200 (299)
Q Consensus 136 iwd~~~~~~--~~~~~~~~---~~~~~~~~~~~~~l~-~~~d~-----~i~v~d~~~~--~--~~~~~~~~~~~~~~~~~ 200 (299)
+|++.+++. ...+.... ....+.|+|||++|+ .+.++ .|++||+.++ . ..+........ ..+.
T Consensus 247 ~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~~~ 324 (741)
T 1yr2_A 247 LHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQW--DFVD 324 (741)
T ss_dssp EEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCE--EEEE
T ss_pred EEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceE--EEEe
Confidence 999887652 22333322 345699999999988 55443 8999999765 2 23333332222 1234
Q ss_pred cCCCeEEEecC----CCcEEEEEcCCc--ceeeeccccCCceeEEEeCCCCeEEEEeCCCcEEEEeCC-CCceEEEeecc
Q 022324 201 YFDPEAVVGCE----DGTARVFDMYSR--KCSQIIRMHCAPVTSLSLSEDQLIISGSSLGSIAISGLS-SDQRVATLRST 273 (299)
Q Consensus 201 ~~~~~l~s~~~----d~~i~iwd~~~~--~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~-~~~~~~~~~~~ 273 (299)
+++..|+..+. ++.|.+||+.++ +....+..+...+..+.++.+.++++...|+..+||.+. +++.+..+..+
T Consensus 325 ~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~ 404 (741)
T 1yr2_A 325 GVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIAGNRLFASYIHDAKSQVLAFDLDGKPAGAVSLP 404 (741)
T ss_dssp EETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEEBTEEEEEEEETTEEEEEEEETTSCEEEECBCS
T ss_pred ccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEECCEEEEEEEECCEEEEEEEeCCCCceeeccCC
Confidence 77888766654 345999999874 233333344556777888755788888889987777554 46666766643
Q ss_pred -CCCCcEEEEEccCCCCeEE
Q 022324 274 -DCTGHIICLMYPQFLHMLF 292 (299)
Q Consensus 274 -~~~~~i~~~~~s~~g~~l~ 292 (299)
.. .+..++++|+++.|+
T Consensus 405 ~~~--~v~~~~~s~d~~~l~ 422 (741)
T 1yr2_A 405 GIG--SASGLSGRPGDRHAY 422 (741)
T ss_dssp SSC--EEEEEECCBTCSCEE
T ss_pred CCe--EEEEeecCCCCCEEE
Confidence 33 789999999987665
No 211
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=98.93 E-value=8.2e-08 Score=87.92 Aligned_cols=180 Identities=12% Similarity=0.044 Sum_probs=109.7
Q ss_pred cccCeeEEEe-cCC-EEEEEeCC-----CcEEEEecCCceeEEEecCCCce-eEEEEecCCCEEE-EEcCC---------
Q 022324 111 HSVGVDQCRM-KRG-LILTGVGD-----KVMRLWSLEGYKCVEEYSLPNAA-SLVDFDFDESKIV-GLIGT--------- 172 (299)
Q Consensus 111 h~~~i~~~~~-~~~-~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~-~~~d~--------- 172 (299)
|...+..+.| |++ +|+.++.+ ..|++||+.+++.+.... +... ..++|+|| +.|+ +..++
T Consensus 161 ~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~-~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~ 238 (741)
T 1yr2_A 161 GATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADEL-KWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQA 238 (741)
T ss_dssp --EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEE-EEEESCCCEESTT-SEEEEEECCCC--------
T ss_pred CCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccC-CCceeccEEEECC-CEEEEEEecCccccccccc
Confidence 4345677788 676 66655443 369999999998765321 1111 34899999 8888 66554
Q ss_pred -----eEEEEecCCce----eeeeccCCc-cceeeeeccCCCeEEEecCC-----CcEEEEEcCCc--ceeeeccccCCc
Q 022324 173 -----RICIWRRNGLR----SVFPSREGT-FMKGLCMRYFDPEAVVGCED-----GTARVFDMYSR--KCSQIIRMHCAP 235 (299)
Q Consensus 173 -----~i~v~d~~~~~----~~~~~~~~~-~~~~~~~~~~~~~l~s~~~d-----~~i~iwd~~~~--~~~~~~~~~~~~ 235 (299)
.|++|++.++. .++...... ......+++++.+++..+.+ ..|.+||+.++ +....+..+...
T Consensus 239 ~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~ 318 (741)
T 1yr2_A 239 LNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKA 318 (741)
T ss_dssp CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSS
T ss_pred CCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCc
Confidence 38999997664 233332221 12345789999987765543 47999999876 313444444444
Q ss_pred eeEEEeCCC-CeEEEEeC----CCcEEEEeCCCC-ceEEEeeccCCCCcEEEEEccCCCCeEEeee
Q 022324 236 VTSLSLSED-QLIISGSS----LGSIAISGLSSD-QRVATLRSTDCTGHIICLMYPQFLHMLFFLC 295 (299)
Q Consensus 236 i~~~~~~~~-~~l~~~~~----dg~i~iwd~~~~-~~~~~~~~~~~~~~i~~~~~s~~g~~l~s~s 295 (299)
+....+ |+ +.|+..+. ++.|.+||+.++ .....+..+... .+..++++ ++.++++..
T Consensus 319 ~~~~~~-~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~-~l~~~~~~-~~~lv~~~~ 381 (741)
T 1yr2_A 319 QWDFVD-GVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKD-NLESVGIA-GNRLFASYI 381 (741)
T ss_dssp CEEEEE-EETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSS-EEEEEEEE-BTEEEEEEE
T ss_pred eEEEEe-ccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCC-eEEEEEEE-CCEEEEEEE
Confidence 444433 65 66666654 345999999875 233444333332 67778887 555555543
No 212
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.91 E-value=4.4e-07 Score=75.14 Aligned_cols=185 Identities=7% Similarity=-0.025 Sum_probs=116.9
Q ss_pred ccccCeeEEEe-cCCEEEEEeC------CCcEEEEecCCceeEEEecCCC-------ceeEEEEecCCCEEE-E-E---c
Q 022324 110 AHSVGVDQCRM-KRGLILTGVG------DKVMRLWSLEGYKCVEEYSLPN-------AASLVDFDFDESKIV-G-L---I 170 (299)
Q Consensus 110 ~h~~~i~~~~~-~~~~l~s~~~------dg~i~iwd~~~~~~~~~~~~~~-------~~~~~~~~~~~~~l~-~-~---~ 170 (299)
+|...+..+.+ +++.|..... ++.|.+||+.+++.+..+..+. ....+++++++..++ + . .
T Consensus 64 ~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~ 143 (343)
T 2qe8_A 64 ITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDD 143 (343)
T ss_dssp CCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGG
T ss_pred cceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCC
Confidence 45667889999 5564444432 5789999999999877776432 234589998655554 3 3 5
Q ss_pred CCeEEEEecCCceee--eecc------------CC----------------ccceeeeeccCCCeEEEecCCC-cEEEEE
Q 022324 171 GTRICIWRRNGLRSV--FPSR------------EG----------------TFMKGLCMRYFDPEAVVGCEDG-TARVFD 219 (299)
Q Consensus 171 d~~i~v~d~~~~~~~--~~~~------------~~----------------~~~~~~~~~~~~~~l~s~~~d~-~i~iwd 219 (299)
++.|.+||..+++.. ...+ .+ .....+++++++..|+.+..++ .+..++
T Consensus 144 ~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~ 223 (343)
T 2qe8_A 144 KAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIK 223 (343)
T ss_dssp GCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEE
T ss_pred CCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEE
Confidence 789999998765421 1110 00 0123467888887777665554 444444
Q ss_pred cCC---cc-----eeeec--cccCCceeEEEeCCC-CeEEEEeCCCcEEEEeCCCCceEEEeeccCCCCcEEEEEccCCC
Q 022324 220 MYS---RK-----CSQII--RMHCAPVTSLSLSED-QLIISGSSLGSIAISGLSSDQRVATLRSTDCTGHIICLMYPQFL 288 (299)
Q Consensus 220 ~~~---~~-----~~~~~--~~~~~~i~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~g 288 (299)
... +. ....+ .++......++++++ .++++...++.|.+||..+++.......... ..+.+++|.++|
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~~~-~~p~~va~~~~g 302 (343)
T 2qe8_A 224 SADLSNLQLTDAELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTDEKL-SWTDSFNFGSDG 302 (343)
T ss_dssp HHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEECGGG-SCEEEEEECTTS
T ss_pred HHHhcCCCCChhhhhcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEECCce-ecCCeeEECCCC
Confidence 321 10 00111 123345677999998 8888888899999999856764333332211 168999999999
Q ss_pred CeEEeee
Q 022324 289 HMLFFLC 295 (299)
Q Consensus 289 ~~l~s~s 295 (299)
+++++.+
T Consensus 303 ~l~v~~~ 309 (343)
T 2qe8_A 303 YLYFDCN 309 (343)
T ss_dssp CEEEEEC
T ss_pred cEEEEeC
Confidence 8888766
No 213
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.88 E-value=4.9e-06 Score=66.86 Aligned_cols=181 Identities=9% Similarity=-0.048 Sum_probs=118.1
Q ss_pred ccccCeeEEEe-cCC-EEEEEeCCCcEEEEecCCceeEE-EecCC-CceeEEEEecCCCEEEEEc-CCeEEEEecCCcee
Q 022324 110 AHSVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYKCVE-EYSLP-NAASLVDFDFDESKIVGLI-GTRICIWRRNGLRS 184 (299)
Q Consensus 110 ~h~~~i~~~~~-~~~-~l~s~~~dg~i~iwd~~~~~~~~-~~~~~-~~~~~~~~~~~~~~l~~~~-d~~i~v~d~~~~~~ 184 (299)
.....+.++.+ +++ +.++...++.|.+||.. ++... .+... ..+..+++++++++.++.. ++.|..||......
T Consensus 17 ~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~g~~~ 95 (300)
T 2qc5_A 17 IPDSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKKGGFT 95 (300)
T ss_dssp STTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTTSCEE
T ss_pred CCCCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCCCCeE
Confidence 34457788888 556 55555568999999988 55443 12222 3455588999998777544 78899999884333
Q ss_pred eeecc-CCccceeeeeccCCCeEEEecCCCcEEEEEcCCcceee-eccccCCceeEEEeCCC-CeEEEEeCCCcEEEEeC
Q 022324 185 VFPSR-EGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQ-IIRMHCAPVTSLSLSED-QLIISGSSLGSIAISGL 261 (299)
Q Consensus 185 ~~~~~-~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~-~~~~~~~~i~~~~~~~~-~~l~~~~~dg~i~iwd~ 261 (299)
.+... .......+++.+++..+++...++.|..+|.. ++... .+......+..++++++ +++++...++.|..+|.
T Consensus 96 ~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~ 174 (300)
T 2qc5_A 96 EYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN 174 (300)
T ss_dssp EEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT
T ss_pred EecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC
Confidence 23221 12223345666667666666667899999987 55542 22223456899999998 76666666788999998
Q ss_pred CCCceEEEeeccCCCCcEEEEEccCCCCeEEee
Q 022324 262 SSDQRVATLRSTDCTGHIICLMYPQFLHMLFFL 294 (299)
Q Consensus 262 ~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~s~ 294 (299)
+++... +........+.+++++++|.+.++.
T Consensus 175 -~g~~~~-~~~~~~~~~~~~i~~d~~g~l~v~~ 205 (300)
T 2qc5_A 175 -TGKLEE-YPLPTNAAAPVGITSGNDGALWFVE 205 (300)
T ss_dssp -TCCEEE-EECSSTTCCEEEEEECTTSSEEEEE
T ss_pred -CCcEEE-eeCCCCCCCcceEEECCCCCEEEEc
Confidence 566543 3322111268999999999876654
No 214
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.88 E-value=1.1e-06 Score=74.70 Aligned_cols=175 Identities=9% Similarity=-0.061 Sum_probs=113.1
Q ss_pred EEe-cCC-EEEEEeCCC--cEEEEecCCceeEEEe----c-CCCceeEEEEecCCCEEE-EEcCCeEEEEecCCceeeee
Q 022324 118 CRM-KRG-LILTGVGDK--VMRLWSLEGYKCVEEY----S-LPNAASLVDFDFDESKIV-GLIGTRICIWRRNGLRSVFP 187 (299)
Q Consensus 118 ~~~-~~~-~l~s~~~dg--~i~iwd~~~~~~~~~~----~-~~~~~~~~~~~~~~~~l~-~~~d~~i~v~d~~~~~~~~~ 187 (299)
+++ +++ .|+.+..++ .|.+++..++.....+ . ....+..++++|++..|+ +..++.|+.||..+......
T Consensus 176 ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~ 255 (409)
T 3hrp_A 176 PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLI 255 (409)
T ss_dssp CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEE
T ss_pred eeEecCCCcEEEEecCCCceEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEE
Confidence 566 444 777777766 7888888765543333 2 223445599999544444 77788999999987642221
Q ss_pred ----c--cCCccce-eeeeccCCCe-EEEecCCCcEEEEEcCCcceeeecccc---------------CCceeEEEeCCC
Q 022324 188 ----S--REGTFMK-GLCMRYFDPE-AVVGCEDGTARVFDMYSRKCSQIIRMH---------------CAPVTSLSLSED 244 (299)
Q Consensus 188 ----~--~~~~~~~-~~~~~~~~~~-l~s~~~d~~i~iwd~~~~~~~~~~~~~---------------~~~i~~~~~~~~ 244 (299)
. ..+.... .+++++.+.. +++-..++.|+.|+... + +..+.++ -.....++++++
T Consensus 256 ~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g-~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~d 333 (409)
T 3hrp_A 256 KQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDG-E-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDED 333 (409)
T ss_dssp EECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTC-C-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTT
T ss_pred ecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCC-C-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCC
Confidence 1 1111111 5688886555 55566788899998763 2 2222222 134789999999
Q ss_pred -CeEEEEe-CCCcEEEEeCCCCceEEEeeccC-------------CCCcEEEEEccCCCCeEEeee
Q 022324 245 -QLIISGS-SLGSIAISGLSSDQRVATLRSTD-------------CTGHIICLMYPQFLHMLFFLC 295 (299)
Q Consensus 245 -~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~-------------~~~~i~~~~~s~~g~~l~s~s 295 (299)
+++++-+ .++.|+.||+.+++. .++.++. .......++++++|.++++-.
T Consensus 334 G~lyvad~~~~~~I~~~~~~~G~v-~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~ 398 (409)
T 3hrp_A 334 GNFYIVDGFKGYCLRKLDILDGYV-STVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEA 398 (409)
T ss_dssp CCEEEEETTTTCEEEEEETTTTEE-EEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEES
T ss_pred CCEEEEeCCCCCEEEEEECCCCEE-EEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEEC
Confidence 8777777 889999999877764 4443331 012689999999987776643
No 215
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.86 E-value=1.1e-07 Score=80.56 Aligned_cols=97 Identities=6% Similarity=-0.119 Sum_probs=72.2
Q ss_pred CcEEEEecCCceeEEEecCCCceeEEEEecCCCEEE-EE----------cCCeEEEEecCCceeeeeccC--------Cc
Q 022324 132 KVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIV-GL----------IGTRICIWRRNGLRSVFPSRE--------GT 192 (299)
Q Consensus 132 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~----------~d~~i~v~d~~~~~~~~~~~~--------~~ 192 (299)
+.|.++|..+++.+.++...... .+.++||++.++ +. .++.|.++|..+.+..-.... +.
T Consensus 99 ~~VsVID~~t~~vv~~I~vG~~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~ 177 (426)
T 3c75_H 99 TQQFVIDGSTGRILGMTDGGFLP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGT 177 (426)
T ss_dssp EEEEEEETTTTEEEEEEEECSSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSC
T ss_pred CeEEEEECCCCEEEEEEECCCCC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCC
Confidence 79999999999999999866666 899999999887 54 367899999998763322111 11
Q ss_pred cceeeeeccCCCeEEEecC--CCcEEEEEcCCcceeeec
Q 022324 193 FMKGLCMRYFDPEAVVGCE--DGTARVFDMYSRKCSQII 229 (299)
Q Consensus 193 ~~~~~~~~~~~~~l~s~~~--d~~i~iwd~~~~~~~~~~ 229 (299)
....+.+++++.+++++.. ++.|.+.|+.+++.+..+
T Consensus 178 ~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I 216 (426)
T 3c75_H 178 YQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRML 216 (426)
T ss_dssp CGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEE
T ss_pred CcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEE
Confidence 2234688999999877653 578999998887655433
No 216
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.84 E-value=4.9e-07 Score=73.54 Aligned_cols=183 Identities=9% Similarity=-0.003 Sum_probs=115.3
Q ss_pred EEeeccccCeeEEEe-cCCEEEEEe-CCCcEEEEecCCceeEEEecC-C----CceeEEEEecCCCEEEE-----Ec---
Q 022324 106 DQWKAHSVGVDQCRM-KRGLILTGV-GDKVMRLWSLEGYKCVEEYSL-P----NAASLVDFDFDESKIVG-----LI--- 170 (299)
Q Consensus 106 ~~~~~h~~~i~~~~~-~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~-~----~~~~~~~~~~~~~~l~~-----~~--- 170 (299)
..+..+...+..+.+ +++.|+.+. .++.|.+|+.. ++....... . ..+..+++++++++.++ ..
T Consensus 79 ~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~ 157 (305)
T 3dr2_A 79 DVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPS 157 (305)
T ss_dssp EEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGG
T ss_pred EEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccc
Confidence 344556667888888 566455554 55789999986 553322211 1 12334899999987773 21
Q ss_pred ----------CCeEEEEecCCceeeeeccCCccceeeeeccCCCeEEEecCC------CcEEEEEcCCccee--eec-cc
Q 022324 171 ----------GTRICIWRRNGLRSVFPSREGTFMKGLCMRYFDPEAVVGCED------GTARVFDMYSRKCS--QII-RM 231 (299)
Q Consensus 171 ----------d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d------~~i~iwd~~~~~~~--~~~-~~ 231 (299)
.+.|+.+|..+++..... .......+++++++..++.+... +.|.+||+..+... ..+ ..
T Consensus 158 ~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~ 236 (305)
T 3dr2_A 158 QGCPADPELAHHSVYRLPPDGSPLQRMA-DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASV 236 (305)
T ss_dssp GSCCCCCSSSCEEEEEECSSSCCCEEEE-EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECC
T ss_pred cccccccccCCCeEEEEcCCCCcEEEEe-cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEEC
Confidence 356888887655322111 11222356899999877766554 68999998754311 111 11
Q ss_pred cCCceeEEEeCCC-CeEEEEeCCCcEEEEeCCCCceEEEeeccCCCCcEEEEEccCCCCeEEeeec
Q 022324 232 HCAPVTSLSLSED-QLIISGSSLGSIAISGLSSDQRVATLRSTDCTGHIICLMYPQFLHMLFFLCF 296 (299)
Q Consensus 232 ~~~~i~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~s~s~ 296 (299)
....+..++++++ + |.+++.++ |.+|+. +++.+..+..+. .+.+++|+|+++.|..++.
T Consensus 237 ~~~~pdgi~~d~~G~-lwv~~~~g-v~~~~~-~g~~~~~~~~~~---~~~~~~f~~d~~~L~it~~ 296 (305)
T 3dr2_A 237 PDGLPDGFCVDRGGW-LWSSSGTG-VCVFDS-DGQLLGHIPTPG---TASNCTFDQAQQRLFITGG 296 (305)
T ss_dssp SSSCCCSEEECTTSC-EEECCSSE-EEEECT-TSCEEEEEECSS---CCCEEEECTTSCEEEEEET
T ss_pred CCCCCCeEEECCCCC-EEEecCCc-EEEECC-CCCEEEEEECCC---ceeEEEEeCCCCEEEEEcC
Confidence 2344567888888 6 55555554 999998 588888887654 5788999999987776653
No 217
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.84 E-value=8.6e-06 Score=65.43 Aligned_cols=177 Identities=11% Similarity=0.048 Sum_probs=114.9
Q ss_pred ccCeeEEEe-cCC-EEEEEeCCCcEEEEecCCceeEEEecC---CCceeEEEEecCCCEEEEE-cCCeEEEEecCCceee
Q 022324 112 SVGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEYSL---PNAASLVDFDFDESKIVGL-IGTRICIWRRNGLRSV 185 (299)
Q Consensus 112 ~~~i~~~~~-~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~-~d~~i~v~d~~~~~~~ 185 (299)
...+..+.+ +++ +.++...++.|..+|.. ++.. .+.. ...+..+++++++++.++. .++.|..+|.......
T Consensus 61 ~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~-~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~ 138 (300)
T 2qc5_A 61 DAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFT-EYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTADGTIYE 138 (300)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEE-EEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTTSCEEE
T ss_pred CCcceeEEECCCCCEEEEecCCCeEEEECCC-CCeE-EecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCCCCEEE
Confidence 356778888 555 55555557889999988 5543 2322 2345558999999887754 4789999998743332
Q ss_pred eecc-CCccceeeeeccCCCeEEEecCCCcEEEEEcCCcceeee-ccccCCceeEEEeCCC-CeEEEEeCCCcEEEEeCC
Q 022324 186 FPSR-EGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQI-IRMHCAPVTSLSLSED-QLIISGSSLGSIAISGLS 262 (299)
Q Consensus 186 ~~~~-~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~-~~~~~~~i~~~~~~~~-~~l~~~~~dg~i~iwd~~ 262 (299)
+... .......+++.+++..+++...++.|..+|. +++.... .......+..++++++ .++++....+.|.+||.
T Consensus 139 ~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~- 216 (300)
T 2qc5_A 139 YDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT- 216 (300)
T ss_dssp EECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-
T ss_pred ccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-CCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-
Confidence 2221 1222334567777775555556788999998 5554432 2233456889999988 76666666778999998
Q ss_pred CCceEEE-eeccCCCCcEEEEEccCCCCeEEee
Q 022324 263 SDQRVAT-LRSTDCTGHIICLMYPQFLHMLFFL 294 (299)
Q Consensus 263 ~~~~~~~-~~~~~~~~~i~~~~~s~~g~~l~s~ 294 (299)
+++.... +..... .+.+++++++|++.++.
T Consensus 217 ~g~~~~~~~~~~~~--~~~~i~~d~~g~l~v~~ 247 (300)
T 2qc5_A 217 TGEISEYDIPTPNA--RPHAITAGKNSEIWFTE 247 (300)
T ss_dssp TCCEEEEECSSTTC--CEEEEEECSTTCEEEEE
T ss_pred CCcEEEEECCCCCC--CceEEEECCCCCEEEec
Confidence 5554432 222223 78999999999866654
No 218
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.83 E-value=1.7e-06 Score=70.01 Aligned_cols=174 Identities=10% Similarity=0.062 Sum_probs=108.3
Q ss_pred eEEEe-c-CC-EEEEEeCCCcEEEEecCCceeEEEecCCCceeEEEEecCCCEEEEEcCCeEEEEecCCcee-eeecc-C
Q 022324 116 DQCRM-K-RG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIVGLIGTRICIWRRNGLRS-VFPSR-E 190 (299)
Q Consensus 116 ~~~~~-~-~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~i~v~d~~~~~~-~~~~~-~ 190 (299)
-+..| + ++ ++++...++.|..||..+++. ..+.....+..++++++++++++. ++.|.+||..++.. .+... .
T Consensus 16 Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~-~~~~~~~~~~~i~~~~dG~l~v~~-~~~l~~~d~~~g~~~~~~~~~~ 93 (297)
T 3g4e_A 16 ESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQV-QRVTMDAPVSSVALRQSGGYVATI-GTKFCALNWKEQSAVVLATVDN 93 (297)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEETTTCCE-EEEECSSCEEEEEEBTTSSEEEEE-TTEEEEEETTTTEEEEEEECCT
T ss_pred cCCeEECCCCEEEEEECCCCEEEEEECCCCcE-EEEeCCCceEEEEECCCCCEEEEE-CCeEEEEECCCCcEEEEEecCC
Confidence 34566 4 34 677777889999999988765 345555566679999999966655 67899999987642 22211 1
Q ss_pred C---ccceeeeeccCCCeEEEecC---------CCcEEEEEcCC-cceeeeccccCCceeEEEeCCC-CeE-EEEeCCCc
Q 022324 191 G---TFMKGLCMRYFDPEAVVGCE---------DGTARVFDMYS-RKCSQIIRMHCAPVTSLSLSED-QLI-ISGSSLGS 255 (299)
Q Consensus 191 ~---~~~~~~~~~~~~~~l~s~~~---------d~~i~iwd~~~-~~~~~~~~~~~~~i~~~~~~~~-~~l-~~~~~dg~ 255 (299)
+ ....-+++.+++..+++... ...-.+|.+.. ++... +.......+.++|+|+ +.| ++.+.++.
T Consensus 94 ~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~-~~~~~~~pngi~~spdg~~lyv~~~~~~~ 172 (297)
T 3g4e_A 94 DKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKK-YFDQVDISNGLDWSLDHKIFYYIDSLSYS 172 (297)
T ss_dssp TCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEE-EEEEESBEEEEEECTTSCEEEEEEGGGTE
T ss_pred CCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEE-EeeccccccceEEcCCCCEEEEecCCCCc
Confidence 1 11223567777775443321 12234444432 33322 2233445789999998 654 56666889
Q ss_pred EEEEeC--CCCce-----EEEeeccCCCCcEEEEEccCCCCeEEee
Q 022324 256 IAISGL--SSDQR-----VATLRSTDCTGHIICLMYPQFLHMLFFL 294 (299)
Q Consensus 256 i~iwd~--~~~~~-----~~~~~~~~~~~~i~~~~~s~~g~~l~s~ 294 (299)
|.+||+ .+++. +..+..... .+..++++++|++.++.
T Consensus 173 i~~~~~d~~~G~~~~~~~~~~~~~~~~--~p~g~~~d~~G~lwva~ 216 (297)
T 3g4e_A 173 VDAFDYDLQTGQISNRRSVYKLEKEEQ--IPDGMCIDAEGKLWVAC 216 (297)
T ss_dssp EEEEEECTTTCCEEEEEEEEECCGGGC--EEEEEEEBTTSCEEEEE
T ss_pred EEEEeccCCCCcccCcEEEEECCCCCC--CCCeeEECCCCCEEEEE
Confidence 999987 45543 222222233 68899999999766654
No 219
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.80 E-value=3e-07 Score=76.69 Aligned_cols=143 Identities=8% Similarity=-0.059 Sum_probs=103.2
Q ss_pred cCC-EEEEEeC-----CCcEEEEecCCceeEEEecCCCceeEEEEecCCCEEE-EE----------cCCeEEEEecCCce
Q 022324 121 KRG-LILTGVG-----DKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIV-GL----------IGTRICIWRRNGLR 183 (299)
Q Consensus 121 ~~~-~l~s~~~-----dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~----------~d~~i~v~d~~~~~ 183 (299)
|++ .++.... ++.|.+.|..+++.+.++......- +.++|+++.++ +. .++.|.+||..+.+
T Consensus 42 pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~ 120 (386)
T 3sjl_D 42 PDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLPN-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLL 120 (386)
T ss_dssp CCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSCE-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCC
T ss_pred CCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCCc-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCe
Confidence 455 4555443 6899999999999999998655444 99999999887 54 35789999999876
Q ss_pred eeee--ccC------CccceeeeeccCCCeEEEecC--CCcEEEEEcCCcceeeeccccCCceeEEEeCCC-CeEEEEeC
Q 022324 184 SVFP--SRE------GTFMKGLCMRYFDPEAVVGCE--DGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGSS 252 (299)
Q Consensus 184 ~~~~--~~~------~~~~~~~~~~~~~~~l~s~~~--d~~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~-~~l~~~~~ 252 (299)
..-. ... +.....+.+++++.+++++.. ++.|.++|+.+++.+.++.... . ...+..+ +.+++.+.
T Consensus 121 v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g--~-~~~~P~g~~~~~~~~~ 197 (386)
T 3sjl_D 121 PTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPD--C-YHIFPTAPDTFFMHCR 197 (386)
T ss_dssp EEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS--E-EEEEEEETTEEEEEET
T ss_pred EEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCC--c-ceeecCCCceeEEECC
Confidence 3322 211 123335789999999777753 6899999999999988885322 1 2223233 67778888
Q ss_pred CCcEEEEeCCC-CceE
Q 022324 253 LGSIAISGLSS-DQRV 267 (299)
Q Consensus 253 dg~i~iwd~~~-~~~~ 267 (299)
||.+.+.++.+ ++..
T Consensus 198 DG~~~~v~~~~~g~v~ 213 (386)
T 3sjl_D 198 DGSLAKVAFGTEGTPE 213 (386)
T ss_dssp TSCEEEEECCSSSCCE
T ss_pred CCCEEEEECCCCCeEE
Confidence 99999999976 5653
No 220
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.79 E-value=2.1e-07 Score=84.55 Aligned_cols=179 Identities=12% Similarity=0.071 Sum_probs=111.8
Q ss_pred ccccCeeEEEe-cCC-EEE-EE----eCCCcEEEEecCCceeEEEecCCCc-eeEEEEecCCCEEE-EEcCC--------
Q 022324 110 AHSVGVDQCRM-KRG-LIL-TG----VGDKVMRLWSLEGYKCVEEYSLPNA-ASLVDFDFDESKIV-GLIGT-------- 172 (299)
Q Consensus 110 ~h~~~i~~~~~-~~~-~l~-s~----~~dg~i~iwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~-~~~d~-------- 172 (299)
+|...+..+.| |++ +|+ +. +....|++||+.+++.+... .+.. ...++|+ |++.|+ ++.+.
T Consensus 126 ~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~-~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~ 203 (693)
T 3iuj_A 126 DGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETP-LKDVKFSGISWL-GNEGFFYSSYDKPDGSELSA 203 (693)
T ss_dssp TSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEE-EEEEESCCCEEE-TTTEEEEEESSCCC------
T ss_pred CCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccc-cCCceeccEEEe-CCCEEEEEEecCcccccccc
Confidence 45556777888 666 555 32 33357999999999865431 1111 1348899 999888 76663
Q ss_pred -----eEEEEecCCce----eeeeccC--CccceeeeeccCCCeEEE-ec---CCCcEEEEEcCCcc-eeeeccccCCce
Q 022324 173 -----RICIWRRNGLR----SVFPSRE--GTFMKGLCMRYFDPEAVV-GC---EDGTARVFDMYSRK-CSQIIRMHCAPV 236 (299)
Q Consensus 173 -----~i~v~d~~~~~----~~~~~~~--~~~~~~~~~~~~~~~l~s-~~---~d~~i~iwd~~~~~-~~~~~~~~~~~i 236 (299)
.|++|++.+.. .++.... ........+++++.+++. .+ ..+.|.++|+.++. ....+..+....
T Consensus 204 ~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~ 283 (693)
T 3iuj_A 204 RTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDAD 283 (693)
T ss_dssp -CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSC
T ss_pred cCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCce
Confidence 49999998764 2333322 111224578999998643 22 23589999998763 334444445444
Q ss_pred eEEEeCC-C-CeEEEEeCC---CcEEEEeCCCCce--EEEeeccCCCCcEEEEEccCCCCeEEeee
Q 022324 237 TSLSLSE-D-QLIISGSSL---GSIAISGLSSDQR--VATLRSTDCTGHIICLMYPQFLHMLFFLC 295 (299)
Q Consensus 237 ~~~~~~~-~-~~l~~~~~d---g~i~iwd~~~~~~--~~~~~~~~~~~~i~~~~~s~~g~~l~s~s 295 (299)
... +++ + .+++....+ +.|..+|+.+++. .+.+..+.. .+. .|++++++|+...
T Consensus 284 ~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~--~~~--~~s~~g~~lv~~~ 344 (693)
T 3iuj_A 284 VSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQ--QVL--TVHSGSGYLFAEY 344 (693)
T ss_dssp EEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCS--SCE--EEEEETTEEEEEE
T ss_pred EEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCC--CEE--EEEEECCEEEEEE
Confidence 444 343 3 455555443 6799999987654 355655555 343 8899999887664
No 221
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.78 E-value=3e-09 Score=89.16 Aligned_cols=163 Identities=7% Similarity=-0.088 Sum_probs=91.6
Q ss_pred cCC-EEEEEeCCCcEEEEecCCceeEEEecCCCce-e--EEEEecCCCEEEEEcCCeEEEEecCCceeeeeccCCcccee
Q 022324 121 KRG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNAA-S--LVDFDFDESKIVGLIGTRICIWRRNGLRSVFPSREGTFMKG 196 (299)
Q Consensus 121 ~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~-~--~~~~~~~~~~l~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~ 196 (299)
.++ .+++++.||.|+.||.++|+.+..+..+... . ...+..++..++++.++.++.||..+++......... .
T Consensus 47 ~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~sp~~~~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~---~ 123 (369)
T 2hz6_A 47 VEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQASPCRSSDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF---A 123 (369)
T ss_dssp ---CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTTCSCC-----CCCCEEEEEEEEECCC----------------
T ss_pred cCCCEEEEeCCCCEEEEEECCCCceeeeeeccCccccccCceEecCCEEEEEeCCCEEEEEECCCCcEEEEecCCC---c
Confidence 455 7777889999999999999887766543211 1 1111123333338889999999999886544332221 1
Q ss_pred eeeccCCCeEEEecCCCcEEEEEcCCcceeeeccccCCceeEEEeCCC----CeEEEEeCCCcEEEEeCCCCceEEEeec
Q 022324 197 LCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED----QLIISGSSLGSIAISGLSSDQRVATLRS 272 (299)
Q Consensus 197 ~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~----~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 272 (299)
...++.+..+++++.++.|+.||.++++.+..+.... .....+.++ ..+++++.||.|+.||.++|+.+.+...
T Consensus 124 ~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~--~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~ 201 (369)
T 2hz6_A 124 DSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATYFD--YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQNY 201 (369)
T ss_dssp ---------EEEEEEEEEEECCCSSSSSCCCEEEEEE--ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEEC
T ss_pred ccccccCCEEEEEecCCEEEEEECCCCCEEEeEeccc--ccCccccCCccccceEEEECCCCEEEEEECCCCcEEEEecC
Confidence 2344567778899999999999999998877664221 222333332 4677889999999999999999888764
Q ss_pred cCCCCcEEEEEccCCCCe
Q 022324 273 TDCTGHIICLMYPQFLHM 290 (299)
Q Consensus 273 ~~~~~~i~~~~~s~~g~~ 290 (299)
... .+....++++|..
T Consensus 202 ~~p--v~~~~~~~~dg~~ 217 (369)
T 2hz6_A 202 ASP--VVAFYVWQREGLR 217 (369)
T ss_dssp SSC--EEEEEECTTSSCE
T ss_pred CCc--eEEEEEecCCceE
Confidence 432 3344567777753
No 222
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.75 E-value=6.7e-07 Score=81.03 Aligned_cols=174 Identities=10% Similarity=0.044 Sum_probs=113.1
Q ss_pred EEe-c-CCEEEEEeCCCc-------------------EEEEecCCceeEEEecCC--C--------ceeEEEEecCCC--
Q 022324 118 CRM-K-RGLILTGVGDKV-------------------MRLWSLEGYKCVEEYSLP--N--------AASLVDFDFDES-- 164 (299)
Q Consensus 118 ~~~-~-~~~l~s~~~dg~-------------------i~iwd~~~~~~~~~~~~~--~--------~~~~~~~~~~~~-- 164 (299)
+.+ + .++++.++.++. |..+|..+|+.+..++.. . ..+......+++
T Consensus 240 ~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~ 319 (689)
T 1yiq_A 240 FAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPR 319 (689)
T ss_dssp EEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEE
T ss_pred eeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEE
Confidence 455 3 348888877763 999999999999887642 1 122233344564
Q ss_pred -EEE-EEcCCeEEEEecCCceeeeeccCCc----------------------------------------cceeeeeccC
Q 022324 165 -KIV-GLIGTRICIWRRNGLRSVFPSREGT----------------------------------------FMKGLCMRYF 202 (299)
Q Consensus 165 -~l~-~~~d~~i~v~d~~~~~~~~~~~~~~----------------------------------------~~~~~~~~~~ 202 (299)
.++ ++.+|.++++|..+++.+....... .-..+++++.
T Consensus 320 ~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~ 399 (689)
T 1yiq_A 320 KVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPD 399 (689)
T ss_dssp EEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETT
T ss_pred EEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCC
Confidence 455 8889999999998886442111000 0001345555
Q ss_pred CCeEEEec---------------------------------------------CCCcEEEEEcCCcceeeeccccCCcee
Q 022324 203 DPEAVVGC---------------------------------------------EDGTARVFDMYSRKCSQIIRMHCAPVT 237 (299)
Q Consensus 203 ~~~l~s~~---------------------------------------------~d~~i~iwd~~~~~~~~~~~~~~~~i~ 237 (299)
...+++.. .+|.|..||+.+++.+..+..+. ++.
T Consensus 400 ~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~-~~~ 478 (689)
T 1yiq_A 400 TGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVT-IFN 478 (689)
T ss_dssp TTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESS-SCC
T ss_pred CCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCCC-Ccc
Confidence 55544431 14779999999999988875433 233
Q ss_pred EEEeCCC-CeEEEEeCCCcEEEEeCCCCceEEEeeccCCCCcEEEEEccCCCCeEEe
Q 022324 238 SLSLSED-QLIISGSSLGSIAISGLSSDQRVATLRSTDCTGHIICLMYPQFLHMLFF 293 (299)
Q Consensus 238 ~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~s 293 (299)
.-.+... .+++.|+.||.|+.||.++|+.+.+++..... .-.-+.|..+|+..++
T Consensus 479 ~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~~~~-~~~p~ty~~~G~qyv~ 534 (689)
T 1yiq_A 479 GGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPAASGV-MAAPVTYSVDGEQYVT 534 (689)
T ss_dssp CCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCC-CSCCEEEEETTEEEEE
T ss_pred CccceECCCEEEEECCCCcEEEEECCCCccceeeeCCCCc-ccCceEEEECCEEEEE
Confidence 2233334 78899999999999999999999988766432 1233566778875443
No 223
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.75 E-value=2.5e-06 Score=69.29 Aligned_cols=183 Identities=8% Similarity=-0.065 Sum_probs=111.9
Q ss_pred EEeeccccCeeEEEe-cCC--EEEEEeCCCcEEEEecCCceeEEEecCC-CceeEEEEecCCCEEEEEc-CCeEEEEecC
Q 022324 106 DQWKAHSVGVDQCRM-KRG--LILTGVGDKVMRLWSLEGYKCVEEYSLP-NAASLVDFDFDESKIVGLI-GTRICIWRRN 180 (299)
Q Consensus 106 ~~~~~h~~~i~~~~~-~~~--~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~-d~~i~v~d~~ 180 (299)
..+...........| +++ ++++...++.|..|+. +++. ..+..+ ..+..++++++++++++.. ++.|..|+..
T Consensus 38 ~~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~~-~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~ 115 (305)
T 3dr2_A 38 LTLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGTV-DVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD 115 (305)
T ss_dssp EEEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSCE-EEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT
T ss_pred EEEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCCE-EEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC
Confidence 333444445566777 544 6777888899999998 4543 333333 3445599999999777554 5789999986
Q ss_pred Cceeeeec-cCCc---cceeeeeccCCCeEEE----ecC-------------CCcEEEEEcCCcceeeeccccCCceeEE
Q 022324 181 GLRSVFPS-REGT---FMKGLCMRYFDPEAVV----GCE-------------DGTARVFDMYSRKCSQIIRMHCAPVTSL 239 (299)
Q Consensus 181 ~~~~~~~~-~~~~---~~~~~~~~~~~~~l~s----~~~-------------d~~i~iwd~~~~~~~~~~~~~~~~i~~~ 239 (299)
.....+.. ..+. ....+++.+++..+++ |.. .+.|..+|..+++..... .......+
T Consensus 116 g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~~p~gl 193 (305)
T 3dr2_A 116 GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DLDHPNGL 193 (305)
T ss_dssp SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EESSEEEE
T ss_pred CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--cCCCCcce
Confidence 43322211 1111 1123577777776665 332 256778887766654333 34457889
Q ss_pred EeCCC-CeEEEEeCC------CcEEEEeCCCCceE--EEeec-cCCCCcEEEEEccCCCCeEEee
Q 022324 240 SLSED-QLIISGSSL------GSIAISGLSSDQRV--ATLRS-TDCTGHIICLMYPQFLHMLFFL 294 (299)
Q Consensus 240 ~~~~~-~~l~~~~~d------g~i~iwd~~~~~~~--~~~~~-~~~~~~i~~~~~s~~g~~l~s~ 294 (299)
+|+|+ +.|+.+... +.|.+|++..+... ..+.. ... ....++++++|++.++.
T Consensus 194 ~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~--~pdgi~~d~~G~lwv~~ 256 (305)
T 3dr2_A 194 AFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDG--LPDGFCVDRGGWLWSSS 256 (305)
T ss_dssp EECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSS--CCCSEEECTTSCEEECC
T ss_pred EEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCC--CCCeEEECCCCCEEEec
Confidence 99999 767666554 78999998754411 11111 122 45678888888855543
No 224
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.75 E-value=4e-06 Score=68.84 Aligned_cols=172 Identities=9% Similarity=-0.025 Sum_probs=107.6
Q ss_pred eEEEe-cC-C-EEEEEeCCCcEEEEecCCceeEEEecCCCceeEEEEecCCCEEEEEcCCeEEEEecCCceee-eeccC-
Q 022324 116 DQCRM-KR-G-LILTGVGDKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIVGLIGTRICIWRRNGLRSV-FPSRE- 190 (299)
Q Consensus 116 ~~~~~-~~-~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~i~v~d~~~~~~~-~~~~~- 190 (299)
....| ++ + ++++...++.|..||..+++.. .+.....+..+.+++++++++++. ..|.+||..++... +....
T Consensus 52 egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~~~~~v~~i~~~~dg~l~v~~~-~gl~~~d~~~g~~~~~~~~~~ 129 (326)
T 2ghs_A 52 EGPTFDPASGTAWWFNILERELHELHLASGRKT-VHALPFMGSALAKISDSKQLIASD-DGLFLRDTATGVLTLHAELES 129 (326)
T ss_dssp EEEEEETTTTEEEEEEGGGTEEEEEETTTTEEE-EEECSSCEEEEEEEETTEEEEEET-TEEEEEETTTCCEEEEECSST
T ss_pred cCCeEeCCCCEEEEEECCCCEEEEEECCCCcEE-EEECCCcceEEEEeCCCeEEEEEC-CCEEEEECCCCcEEEEeeCCC
Confidence 45566 44 4 6777777899999999887653 344445566689999998887664 45999998766422 22111
Q ss_pred ---CccceeeeeccCCCeEEEecC------CCcEEEEEcCCcceeeeccccCCceeEEEeCCC-CeE-EEEeCCCcEEEE
Q 022324 191 ---GTFMKGLCMRYFDPEAVVGCE------DGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLI-ISGSSLGSIAIS 259 (299)
Q Consensus 191 ---~~~~~~~~~~~~~~~l~s~~~------d~~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~-~~l-~~~~~dg~i~iw 259 (299)
......+++.+++..+++... .+.|..++ +++... +.........++|+|+ +.+ ++.+.++.|.+|
T Consensus 130 ~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~-~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~ 206 (326)
T 2ghs_A 130 DLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTK-LFADISIPNSICFSPDGTTGYFVDTKVNRLMRV 206 (326)
T ss_dssp TCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEE-EEEEESSEEEEEECTTSCEEEEEETTTCEEEEE
T ss_pred CCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEE-eeCCCcccCCeEEcCCCCEEEEEECCCCEEEEE
Confidence 111223567777775544322 24565666 454332 2233345788999998 655 445567899999
Q ss_pred eCC--CC-ce-----EEEeeccCCCCcEEEEEccCCCCeEEee
Q 022324 260 GLS--SD-QR-----VATLRSTDCTGHIICLMYPQFLHMLFFL 294 (299)
Q Consensus 260 d~~--~~-~~-----~~~~~~~~~~~~i~~~~~s~~g~~l~s~ 294 (299)
|+. ++ +. +..+..... .+.+++++++|.+.++.
T Consensus 207 d~~~~~Gl~~~~~~~~~~~~~~~~--~p~gi~~d~~G~lwva~ 247 (326)
T 2ghs_A 207 PLDARTGLPTGKAEVFIDSTGIKG--GMDGSVCDAEGHIWNAR 247 (326)
T ss_dssp EBCTTTCCBSSCCEEEEECTTSSS--EEEEEEECTTSCEEEEE
T ss_pred EcccccCCcccCceEEEECCCCCC--CCCeeEECCCCCEEEEE
Confidence 986 55 32 222222223 67889999999876654
No 225
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.74 E-value=3.6e-06 Score=70.47 Aligned_cols=130 Identities=3% Similarity=-0.114 Sum_probs=95.2
Q ss_pred cEEEEecCCceeEEEecCCCceeEEEEecCCCEEE-EE----------cCCeEEEEecCCceeeeeccC--------Ccc
Q 022324 133 VMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIV-GL----------IGTRICIWRRNGLRSVFPSRE--------GTF 193 (299)
Q Consensus 133 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~----------~d~~i~v~d~~~~~~~~~~~~--------~~~ 193 (299)
+|.++|..+++.+..+...... .++++||++.++ +. .++.|.+||..+.+....... +..
T Consensus 48 ~v~v~D~~t~~~~~~i~~g~~p-~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~ 126 (373)
T 2mad_H 48 QQWVLDAGSGSILGHVNGGFLP-NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPY 126 (373)
T ss_pred EEEEEECCCCeEEEEecCCCCC-CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCC
Confidence 8899999999999888866555 899999999988 43 267899999987643322111 112
Q ss_pred ceeeeeccCCCeEEEecC--CCcEEEEEcCCcceeee-ccccCCceeEEEeCCC--CeEEEEeCCCcEEEEeCCCCceEE
Q 022324 194 MKGLCMRYFDPEAVVGCE--DGTARVFDMYSRKCSQI-IRMHCAPVTSLSLSED--QLIISGSSLGSIAISGLSSDQRVA 268 (299)
Q Consensus 194 ~~~~~~~~~~~~l~s~~~--d~~i~iwd~~~~~~~~~-~~~~~~~i~~~~~~~~--~~l~~~~~dg~i~iwd~~~~~~~~ 268 (299)
...+.++|++.+++++.. ++.|.++| .+++.+.. +... . ++.+.|+ +.+++.+.||.+.++|. +++.+.
T Consensus 127 p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~-~---~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~ 200 (373)
T 2mad_H 127 SWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSP-T---CYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAG 200 (373)
T ss_pred ccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCC-c---eEEEEeCCCceEEEEcCCCCEEEEEC-CCcEEE
Confidence 234689999999887764 57899999 99988877 6432 2 2334444 56677888999999999 887664
Q ss_pred E
Q 022324 269 T 269 (299)
Q Consensus 269 ~ 269 (299)
.
T Consensus 201 ~ 201 (373)
T 2mad_H 201 A 201 (373)
T ss_pred E
Confidence 3
No 226
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.74 E-value=4.1e-07 Score=82.23 Aligned_cols=158 Identities=9% Similarity=0.027 Sum_probs=105.7
Q ss_pred cEEEEecCCceeEEEecCC----------CceeEEEEecCC---CEEE-EEcCCeEEEEecCCceeeeeccCCccc----
Q 022324 133 VMRLWSLEGYKCVEEYSLP----------NAASLVDFDFDE---SKIV-GLIGTRICIWRRNGLRSVFPSREGTFM---- 194 (299)
Q Consensus 133 ~i~iwd~~~~~~~~~~~~~----------~~~~~~~~~~~~---~~l~-~~~d~~i~v~d~~~~~~~~~~~~~~~~---- 194 (299)
.|..+|..+|+.+..++.. ...+.+....++ ..++ ++.+|.++++|..+++.+.........
T Consensus 284 sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~ 363 (677)
T 1kb0_A 284 SIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASG 363 (677)
T ss_dssp EEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEE
T ss_pred EEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccc
Confidence 5999999999999887642 123334444577 4566 889999999999988644322111000
Q ss_pred --------------------------------eeeeeccCCCeEEEecC-------------------------------
Q 022324 195 --------------------------------KGLCMRYFDPEAVVGCE------------------------------- 211 (299)
Q Consensus 195 --------------------------------~~~~~~~~~~~l~s~~~------------------------------- 211 (299)
..+++++....+++...
T Consensus 364 ~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g 443 (677)
T 1kb0_A 364 YDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTA 443 (677)
T ss_dssp ECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCC
T ss_pred cCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccc
Confidence 02355566666555322
Q ss_pred ------------CCcEEEEEcCCcceeeeccccCCceeEEEeCCC-CeEEEEeCCCcEEEEeCCCCceEEEeeccCCCCc
Q 022324 212 ------------DGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGSSLGSIAISGLSSDQRVATLRSTDCTGH 278 (299)
Q Consensus 212 ------------d~~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~ 278 (299)
.+.|..||+.+++.+..+.. ..++....+..+ .+++.++.||.+++||.++++.+.++...... .
T Consensus 444 ~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~-~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~-~ 521 (677)
T 1kb0_A 444 KFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEH-VSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGV-V 521 (677)
T ss_dssp EEECSSCCCSCCEEEEEEEETTTTEEEEEEEE-SSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCC-C
T ss_pred cccccccCCCCCccEEEEEeCCCCcEEeecCC-CCCCcCcceEeCCCEEEEECCCCcEEEEECCCCceeeeeeCCCCc-c
Confidence 27899999999999888753 333444444444 78888999999999999999999999765532 2
Q ss_pred EEEEEccCCCCeEE
Q 022324 279 IICLMYPQFLHMLF 292 (299)
Q Consensus 279 i~~~~~s~~g~~l~ 292 (299)
-.-+.+.++|+.++
T Consensus 522 ~~p~~y~~~G~~~v 535 (677)
T 1kb0_A 522 AAPSTYMVDGRQYV 535 (677)
T ss_dssp SCCEEEEETTEEEE
T ss_pred cCCEEEEeCCEEEE
Confidence 23345667886444
No 227
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.74 E-value=5.1e-06 Score=69.28 Aligned_cols=172 Identities=10% Similarity=0.021 Sum_probs=105.8
Q ss_pred EEe-cCC-EEEEEeC--CCcEEEEecCCceeEEEecCCCceeEEEEecCCCEEE-EEcCCeEEEEecCC-ceeeee--cc
Q 022324 118 CRM-KRG-LILTGVG--DKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIV-GLIGTRICIWRRNG-LRSVFP--SR 189 (299)
Q Consensus 118 ~~~-~~~-~l~s~~~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~d~~i~v~d~~~-~~~~~~--~~ 189 (299)
+.+ +++ +++.+.. ++.|.++|+.+++.+.++..+.. ...+....+.++ .+.||++.+.++.. ++.... ..
T Consensus 142 ~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g~--~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~ 219 (386)
T 3sjl_D 142 TSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDC--YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEV 219 (386)
T ss_dssp EEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE--EEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCC
T ss_pred EEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCCc--ceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecce
Confidence 455 566 6666653 68999999999999998876542 222222334444 77788887777765 322110 00
Q ss_pred C----Cccceeeeec-cCCCeEEEecCCCcEEEEEcCCcc--eeeecc----------ccCCceeEEEeCCC-CeEEEEe
Q 022324 190 E----GTFMKGLCMR-YFDPEAVVGCEDGTARVFDMYSRK--CSQIIR----------MHCAPVTSLSLSED-QLIISGS 251 (299)
Q Consensus 190 ~----~~~~~~~~~~-~~~~~l~s~~~d~~i~iwd~~~~~--~~~~~~----------~~~~~i~~~~~~~~-~~l~~~~ 251 (299)
. .....-..+. +++ .++..+.+|.+.+.|..+.. .+..+. -.......++++++ +.+....
T Consensus 220 ~~~~~~~~~~~~~~~~~dG-~~~~vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~ 298 (386)
T 3sjl_D 220 FHPEDEFLINHPAYSQKAG-RLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLV 298 (386)
T ss_dssp CSCTTSCBCSCCEEETTTT-EEEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEE
T ss_pred eccccccccccceeEcCCC-cEEEEeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEe
Confidence 0 1100001232 334 34446668999999997553 232221 01223345777887 5555543
Q ss_pred C----------CCcEEEEeCCCCceEEEeeccCCCCcEEEEEccCCCC-eEEeee
Q 022324 252 S----------LGSIAISGLSSDQRVATLRSTDCTGHIICLMYPQFLH-MLFFLC 295 (299)
Q Consensus 252 ~----------dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~g~-~l~s~s 295 (299)
. .+.|.+.|+.+++.+.++.... .+.+|++++|++ +|+++.
T Consensus 299 ~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg~---~~~~lavs~D~~~~ly~tn 350 (386)
T 3sjl_D 299 DQRDEWRHKTASRFVVVLDAKTGERLAKFEMGH---EIDSINVSQDEKPLLYALS 350 (386)
T ss_dssp EECCTTCTTSCEEEEEEEETTTCCEEEEEEEEE---EECEEEECSSSSCEEEEEE
T ss_pred ccccccccCCCCCEEEEEECCCCeEEEEEECCC---CcceEEECCCCCeEEEEEc
Confidence 2 2579999999999999997665 689999999997 676654
No 228
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.71 E-value=3.2e-06 Score=71.29 Aligned_cols=175 Identities=11% Similarity=0.134 Sum_probs=112.4
Q ss_pred cCCEEEEEeCC------CcEEEEecCCceeEEEecCC-C-c--eeEEEEecCCCEEEEEc--------------------
Q 022324 121 KRGLILTGVGD------KVMRLWSLEGYKCVEEYSLP-N-A--ASLVDFDFDESKIVGLI-------------------- 170 (299)
Q Consensus 121 ~~~~l~s~~~d------g~i~iwd~~~~~~~~~~~~~-~-~--~~~~~~~~~~~~l~~~~-------------------- 170 (299)
++++++++..+ |.|.+.|.++++.+.++... . . ...+-|+|+++.++.+.
T Consensus 147 pdGi~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~ 226 (462)
T 2ece_A 147 PDAIYISALGNEEGEGPGGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRY 226 (462)
T ss_dssp SSCEEEEEEEETTSCSCCEEEEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHS
T ss_pred CCeEEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhcc
Confidence 67755565555 78999999999999998733 2 1 22377799999888653
Q ss_pred CCeEEEEecCCceeeeeccCC---cccee--eeeccCCCeEEEec------CCCcEEEEEcCCcc--eeeec--cc----
Q 022324 171 GTRICIWRRNGLRSVFPSREG---TFMKG--LCMRYFDPEAVVGC------EDGTARVFDMYSRK--CSQII--RM---- 231 (299)
Q Consensus 171 d~~i~v~d~~~~~~~~~~~~~---~~~~~--~~~~~~~~~l~s~~------~d~~i~iwd~~~~~--~~~~~--~~---- 231 (299)
+.+|.+||+.+.+.......+ ....- +++++++++++.+. .+++|.+|....++ ..+.+ ..
T Consensus 227 ~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~ 306 (462)
T 2ece_A 227 GNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLE 306 (462)
T ss_dssp CCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECC
T ss_pred CCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCcccc
Confidence 789999999976533222221 11112 34588888855554 56678776554332 11111 00
Q ss_pred ------------cCCceeEEEeCCC-CeEEEEe-CCCcEEEEeCCC---CceEEEeeccCC------------CCcEEEE
Q 022324 232 ------------HCAPVTSLSLSED-QLIISGS-SLGSIAISGLSS---DQRVATLRSTDC------------TGHIICL 282 (299)
Q Consensus 232 ------------~~~~i~~~~~~~~-~~l~~~~-~dg~i~iwd~~~---~~~~~~~~~~~~------------~~~i~~~ 282 (299)
....+..|.+++| ++|.++. ..+.|.+||+.. .+.+..+..... .+..+.+
T Consensus 307 ~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~ 386 (462)
T 2ece_A 307 GNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQML 386 (462)
T ss_dssp SSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCE
T ss_pred ccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEE
Confidence 0244788999999 7666555 478999999853 355555543310 0125789
Q ss_pred EccCCCCeEEeee
Q 022324 283 MYPQFLHMLFFLC 295 (299)
Q Consensus 283 ~~s~~g~~l~s~s 295 (299)
+++|||++|+++.
T Consensus 387 ~lSpDGk~LyVaN 399 (462)
T 2ece_A 387 EISRDGRRVYVTN 399 (462)
T ss_dssp EECTTSSEEEEEC
T ss_pred EEcCCCCEEEEEc
Confidence 9999999888765
No 229
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.70 E-value=5.9e-07 Score=78.32 Aligned_cols=181 Identities=10% Similarity=-0.044 Sum_probs=124.2
Q ss_pred CeeEEEe---cCC-EEEEEe------------------CCCcEEEEecCCceeEEEecCCCceeEEEEecCCCEEE-EEc
Q 022324 114 GVDQCRM---KRG-LILTGV------------------GDKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIV-GLI 170 (299)
Q Consensus 114 ~i~~~~~---~~~-~l~s~~------------------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~ 170 (299)
....+.+ |++ +++.++ .++.+.+.|.++.+.+.++......-.++++|++++++ ++.
T Consensus 135 ~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v~~qI~Vgg~pd~~~~spdGk~~~vt~~ 214 (595)
T 1fwx_A 135 GIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWEVAWQVLVSGNLDNCDADYEGKWAFSTSY 214 (595)
T ss_dssp SEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTEEEEEEEESSCCCCEEECSSSSEEEEEES
T ss_pred CCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEEECCCCeEEEEEEeCCCccceEECCCCCEEEEEec
Confidence 4566665 555 777774 34689999999999998888654444589999999988 554
Q ss_pred CC--------------------------------------eEEEEecCC--cee-eeeccCCccceeeeeccCCCeE-EE
Q 022324 171 GT--------------------------------------RICIWRRNG--LRS-VFPSREGTFMKGLCMRYFDPEA-VV 208 (299)
Q Consensus 171 d~--------------------------------------~i~v~d~~~--~~~-~~~~~~~~~~~~~~~~~~~~~l-~s 208 (299)
+. .|.+.|..+ ... +.....+.....+.++|++.++ ++
T Consensus 215 ~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~ 294 (595)
T 1fwx_A 215 NSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVA 294 (595)
T ss_dssp CTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEE
T ss_pred CcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEe
Confidence 32 255555554 211 1122222223356899999984 55
Q ss_pred ecCCCcEEEEEcCCcc------------eeeeccccCCceeEEEeCCC-CeEEEEeCCCcEEEEeCCC----------Cc
Q 022324 209 GCEDGTARVFDMYSRK------------CSQIIRMHCAPVTSLSLSED-QLIISGSSLGSIAISGLSS----------DQ 265 (299)
Q Consensus 209 ~~~d~~i~iwd~~~~~------------~~~~~~~~~~~i~~~~~~~~-~~l~~~~~dg~i~iwd~~~----------~~ 265 (299)
+..+.+|.++|+.+.+ ...+... ......++|+|+ ...++.-.|++|.+||+.+ .+
T Consensus 295 ~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~v-G~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~ 373 (595)
T 1fwx_A 295 GKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPEL-GLGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDP 373 (595)
T ss_dssp CTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBC-CSCEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCC
T ss_pred CCCCCeEEEEECcccccccccccCcccceEEEcCC-CCCcceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccce
Confidence 5678999999999653 3334432 345789999998 6666777899999999977 56
Q ss_pred eEEEeeccCCCCcE-----EEEEccCCCCeEEeeecc
Q 022324 266 RVATLRSTDCTGHI-----ICLMYPQFLHMLFFLCFL 297 (299)
Q Consensus 266 ~~~~~~~~~~~~~i-----~~~~~s~~g~~l~s~s~~ 297 (299)
.+.++..+.. +- .++.++|||++|+++.-+
T Consensus 374 vi~kidV~yq--pGh~~~~~g~t~~~DGk~l~~~Nk~ 408 (595)
T 1fwx_A 374 IKDKLDVHYQ--PGHLKTVMGETLDATNDWLVCLSKF 408 (595)
T ss_dssp EEEEEECSSC--EEEEEETTTTSTTCCSSEEEEEESC
T ss_pred eEEEeecccc--cccceeccceEeCCCCCEEEEcCCC
Confidence 7788877654 22 223568999999998654
No 230
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.65 E-value=1.6e-06 Score=71.00 Aligned_cols=172 Identities=10% Similarity=-0.006 Sum_probs=112.6
Q ss_pred cCeeEEEe-cCCEEEEEeCCCcEEEEecCCceeEEEecCCCceeE-EEEecCCCEEEEEcCCeEEEEecCCceeeeeccC
Q 022324 113 VGVDQCRM-KRGLILTGVGDKVMRLWSLEGYKCVEEYSLPNAASL-VDFDFDESKIVGLIGTRICIWRRNGLRSVFPSRE 190 (299)
Q Consensus 113 ~~i~~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~d~~i~v~d~~~~~~~~~~~~ 190 (299)
..+.++.. +++.+..++.++.|..+|.. ++....+..+...+. +...+++.+.+++ +.+..+| .++........
T Consensus 137 ~~~~~~~~~~~g~l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g~l~v~t--~~l~~~d-~~g~~~~~~~~ 212 (330)
T 3hxj_A 137 AIYATPIVSEDGTIYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAASIGKDGTIYFGS--DKVYAIN-PDGTEKWNFYA 212 (330)
T ss_dssp CCCSCCEECTTSCEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTCCEEEES--SSEEEEC-TTSCEEEEECC
T ss_pred ceeeeeEEcCCCEEEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeEEcCCCEEEEEe--CEEEEEC-CCCcEEEEEcc
Confidence 33444445 35678888888999999998 887777765544443 6777788776666 8899999 55433322221
Q ss_pred C-ccceeeeeccCCCeEEEecCCCcEEEEEcCCcceeeeccccCCceeEEEeCCCCeEEEEeCCCcEEEEeCCCCceEEE
Q 022324 191 G-TFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSEDQLIISGSSLGSIAISGLSSDQRVAT 269 (299)
Q Consensus 191 ~-~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~ 269 (299)
. .....+....++ .+..++.++.+..+|. +++.+..+......+..+.+.++..|..++.+|.|..+|. +++.+..
T Consensus 213 ~~~~~~~~~~~~~g-~l~v~t~~~gl~~~~~-~g~~~~~~~~~~~~~~~~~~~~~g~l~v~t~~ggl~~~d~-~g~~~~~ 289 (330)
T 3hxj_A 213 GYWTVTRPAISEDG-TIYVTSLDGHLYAINP-DGTEKWRFKTGKRIESSPVIGNTDTIYFGSYDGHLYAINP-DGTEKWN 289 (330)
T ss_dssp SSCCCSCCEECTTS-CEEEEETTTEEEEECT-TSCEEEEEECSSCCCSCCEECTTSCEEEECTTCEEEEECT-TSCEEEE
T ss_pred CCcceeceEECCCC-eEEEEcCCCeEEEECC-CCCEeEEeeCCCCccccceEcCCCeEEEecCCCCEEEECC-CCcEEEE
Confidence 1 111122333332 5777777888888874 5666666554444445566665656778888989999996 7887777
Q ss_pred eeccCCCCcEEEEEccCCCCeEEe
Q 022324 270 LRSTDCTGHIICLMYPQFLHMLFF 293 (299)
Q Consensus 270 ~~~~~~~~~i~~~~~s~~g~~l~s 293 (299)
+..... .+.++..+++|++.+.
T Consensus 290 ~~~~~~--~~~~~~~d~~g~l~~g 311 (330)
T 3hxj_A 290 FETGSW--IIATPVIDENGTIYFG 311 (330)
T ss_dssp EECSSC--CCSCCEECTTCCEEEE
T ss_pred EEcCCc--cccceEEcCCCEEEEE
Confidence 765544 6777788788876654
No 231
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.64 E-value=1.6e-06 Score=72.25 Aligned_cols=176 Identities=7% Similarity=-0.014 Sum_probs=117.3
Q ss_pred eEEeeccccCeeEEEe-cCC-EEEEEe----------CCCcEEEEecCCceeEEEecCC--------CceeEEEEecCCC
Q 022324 105 IDQWKAHSVGVDQCRM-KRG-LILTGV----------GDKVMRLWSLEGYKCVEEYSLP--------NAASLVDFDFDES 164 (299)
Q Consensus 105 ~~~~~~h~~~i~~~~~-~~~-~l~s~~----------~dg~i~iwd~~~~~~~~~~~~~--------~~~~~~~~~~~~~ 164 (299)
+.++..-..+ .+.+ +++ +++.+. .++.|.+||..+++.+.++..+ .....+.++||++
T Consensus 59 ~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk 136 (368)
T 1mda_H 59 LGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSA 136 (368)
T ss_dssp EEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSS
T ss_pred EEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcCCCC
Confidence 3444433445 5777 666 666554 4789999999999999998754 2344599999999
Q ss_pred EEE-EEc--CCeEEE--EecCCceee---------------------------eeccC----------------------
Q 022324 165 KIV-GLI--GTRICI--WRRNGLRSV---------------------------FPSRE---------------------- 190 (299)
Q Consensus 165 ~l~-~~~--d~~i~v--~d~~~~~~~---------------------------~~~~~---------------------- 190 (299)
+++ +.. +..+.+ +|..+-..+ +....
T Consensus 137 ~lyVan~~~~~~v~V~~iD~~tv~~i~v~~~~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P 216 (368)
T 1mda_H 137 CLLFFLFGSSAAAGLSVPGASDDQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQA 216 (368)
T ss_dssp CEEEEECSSSCEEEEEETTTEEEEEEECSSCCCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCC
T ss_pred EEEEEccCCCCeEEEEEEchhhceEEECCCceEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCc
Confidence 988 553 456777 776320000 00000
Q ss_pred --------------Ccc--------------------------------ceeeeeccCCCeEEEecC---------CCcE
Q 022324 191 --------------GTF--------------------------------MKGLCMRYFDPEAVVGCE---------DGTA 215 (299)
Q Consensus 191 --------------~~~--------------------------------~~~~~~~~~~~~l~s~~~---------d~~i 215 (299)
+.. ...+++++++..++.+.. ++.+
T Consensus 217 ~~~~~~~~~~~vs~~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~ 296 (368)
T 1mda_H 217 AQANYPGMLVWAVASSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENT 296 (368)
T ss_dssp EEETTTTEEEECBSSCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEE
T ss_pred cccccCCEEEEEcCCEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCE
Confidence 000 000345666677665432 2356
Q ss_pred EEEEcCCcceeeeccccCCceeEEEeCCC-C-eEEEEe-CCCcEEEEeCCCCceEEEeeccCCCCcEEEEEccC
Q 022324 216 RVFDMYSRKCSQIIRMHCAPVTSLSLSED-Q-LIISGS-SLGSIAISGLSSDQRVATLRSTDCTGHIICLMYPQ 286 (299)
Q Consensus 216 ~iwd~~~~~~~~~~~~~~~~i~~~~~~~~-~-~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~ 286 (299)
.++|+.+.+.+..+.... ....++++|| + .+++.. .++.|.++|+.+++.+.++.... ....+++.+
T Consensus 297 ~ViD~~t~~vv~~i~vg~-~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~~I~vg~---~P~~i~~~~ 366 (368)
T 1mda_H 297 SSVTASVGQTSGPISNGH-DSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVELDK---GPESLSVQN 366 (368)
T ss_dssp EEEESSSCCEEECCEEEE-EECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEECCCCS---CCCEEECCC
T ss_pred EEEECCCCeEEEEEECCC-CcceEEECCCCCEEEEEccCCCCeEEEEECCCCcEEEEEECCC---CCCEEEeec
Confidence 699999999988886433 5899999998 5 566776 59999999999999999997665 456677654
No 232
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.60 E-value=6.8e-06 Score=69.34 Aligned_cols=173 Identities=9% Similarity=-0.021 Sum_probs=111.7
Q ss_pred EEEEEeCCCcEEEEecCCc----eeEEEec--------CCCceeEEEEecCCCEEE-EEcC------CeEEEEecCCcee
Q 022324 124 LILTGVGDKVMRLWSLEGY----KCVEEYS--------LPNAASLVDFDFDESKIV-GLIG------TRICIWRRNGLRS 184 (299)
Q Consensus 124 ~l~s~~~dg~i~iwd~~~~----~~~~~~~--------~~~~~~~~~~~~~~~~l~-~~~d------~~i~v~d~~~~~~ 184 (299)
+++++..+++|.++|+.+. +...+++ +......+...|++ .++ +..+ +.|.++|..+.+.
T Consensus 98 l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v 176 (462)
T 2ece_A 98 LIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDHYSFEP 176 (462)
T ss_dssp EEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECTTTCCE
T ss_pred EEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEECCCCeE
Confidence 6677888899999999765 7777773 11233447888999 555 4444 6899999997753
Q ss_pred eeeccCC--cc--ceeeeeccCCCeEEEec-------------------CCCcEEEEEcCCcceeeecccc--CCceeEE
Q 022324 185 VFPSREG--TF--MKGLCMRYFDPEAVVGC-------------------EDGTARVFDMYSRKCSQIIRMH--CAPVTSL 239 (299)
Q Consensus 185 ~~~~~~~--~~--~~~~~~~~~~~~l~s~~-------------------~d~~i~iwd~~~~~~~~~~~~~--~~~i~~~ 239 (299)
+-....+ .. ..-+.+++..+.+++.. .+.+|.+||+.+++.+.++... ......+
T Consensus 177 ~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i 256 (462)
T 2ece_A 177 LGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALEL 256 (462)
T ss_dssp EEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEE
T ss_pred EEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCcccee
Confidence 3222211 11 11145678888777763 4789999999998888877642 1334555
Q ss_pred Ee--CCC-CeEEEEe------CCCcEEEEeCCCCce--EEEeeccC----C------------CCcEEEEEccCCCCeEE
Q 022324 240 SL--SED-QLIISGS------SLGSIAISGLSSDQR--VATLRSTD----C------------TGHIICLMYPQFLHMLF 292 (299)
Q Consensus 240 ~~--~~~-~~l~~~~------~dg~i~iwd~~~~~~--~~~~~~~~----~------------~~~i~~~~~s~~g~~l~ 292 (299)
.| +|+ +++.+++ .+++|.+|....++. .+.+.... . ......+.+||||++|.
T Consensus 257 ~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLY 336 (462)
T 2ece_A 257 RPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLY 336 (462)
T ss_dssp EECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEE
T ss_pred EeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEE
Confidence 55 898 7666555 566888776654421 12211000 0 01578899999999999
Q ss_pred eeecc
Q 022324 293 FLCFL 297 (299)
Q Consensus 293 s~s~~ 297 (299)
++.+.
T Consensus 337 VSnrg 341 (462)
T 2ece_A 337 LSLWG 341 (462)
T ss_dssp EEETT
T ss_pred EEeCC
Confidence 88753
No 233
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.60 E-value=2.1e-06 Score=71.43 Aligned_cols=97 Identities=5% Similarity=-0.220 Sum_probs=68.0
Q ss_pred EEEEEeCCC----cEEEEecCCceeEEEecCCCceeEEEEecCCCEEE-EE----------cCCeEEEEecCCceeeeec
Q 022324 124 LILTGVGDK----VMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIV-GL----------IGTRICIWRRNGLRSVFPS 188 (299)
Q Consensus 124 ~l~s~~~dg----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~----------~d~~i~v~d~~~~~~~~~~ 188 (299)
.+++-..++ +|.+.|..+++.+.++...... .+.++|+++.++ +. .++.|.+||+.+.+.....
T Consensus 34 ~yV~~~~~~~~~d~vsvID~~t~~v~~~i~vG~~P-~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I 112 (368)
T 1mda_H 34 SHITLPAYFAGTTENWVSCAGCGVTLGHSLGAFLS-LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADI 112 (368)
T ss_dssp EEEEECTTTCSSEEEEEEETTTTEEEEEEEECTTC-EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEE
T ss_pred EEEECCccCCccceEEEEECCCCeEEEEEeCCCCC-ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEE
Confidence 344444444 8889999999999999865555 799999999988 54 3689999999987643322
Q ss_pred cC--------CccceeeeeccCCCeEEEecC--CCcEEE--EEcC
Q 022324 189 RE--------GTFMKGLCMRYFDPEAVVGCE--DGTARV--FDMY 221 (299)
Q Consensus 189 ~~--------~~~~~~~~~~~~~~~l~s~~~--d~~i~i--wd~~ 221 (299)
.. +.....+++++++.+++++.. +..+.+ +|..
T Consensus 113 ~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~ 157 (368)
T 1mda_H 113 ELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGAS 157 (368)
T ss_dssp EETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTE
T ss_pred ECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchh
Confidence 11 112234688888888777653 355777 7663
No 234
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.58 E-value=3.6e-06 Score=68.79 Aligned_cols=164 Identities=9% Similarity=-0.060 Sum_probs=108.3
Q ss_pred cCCEEEEEeCCCcEEEEecCCceeEEEecCCCceeE-EEEecCCCEEEEEcCCeEEEEecCCceeeeec-cCCccceeee
Q 022324 121 KRGLILTGVGDKVMRLWSLEGYKCVEEYSLPNAASL-VDFDFDESKIVGLIGTRICIWRRNGLRSVFPS-REGTFMKGLC 198 (299)
Q Consensus 121 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~d~~i~v~d~~~~~~~~~~-~~~~~~~~~~ 198 (299)
.++.+..++.++.|..+|.. ++.......+..... +...+++.+.+++.++.+..+|.. +...... ........+.
T Consensus 106 ~~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g~l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~ 183 (330)
T 3hxj_A 106 FEDILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDGTIYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAAS 183 (330)
T ss_dssp ETTEEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTSCEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCE
T ss_pred ECCEEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCCEEEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeE
Confidence 46688889999999999988 777776665544443 667778887778888999999998 4322211 1122111223
Q ss_pred eccCCCeEEEecCCCcEEEEEcCCcceeeeccccCCceeEEEeCCCCeEEEEeCCCcEEEEeCCCCceEEEeeccCCCCc
Q 022324 199 MRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSEDQLIISGSSLGSIAISGLSSDQRVATLRSTDCTGH 278 (299)
Q Consensus 199 ~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~ 278 (299)
...++ .+..++ +.+..+| .+++.+..+......+.++...++..+..++.++.|..+|. +++.+..+..... .
T Consensus 184 ~d~~g-~l~v~t--~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~l~v~t~~~gl~~~~~-~g~~~~~~~~~~~--~ 256 (330)
T 3hxj_A 184 IGKDG-TIYFGS--DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDGTIYVTSLDGHLYAINP-DGTEKWRFKTGKR--I 256 (330)
T ss_dssp ECTTC-CEEEES--SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTSCEEEEETTTEEEEECT-TSCEEEEEECSSC--C
T ss_pred EcCCC-EEEEEe--CEEEEEC-CCCcEEEEEccCCcceeceEECCCCeEEEEcCCCeEEEECC-CCCEeEEeeCCCC--c
Confidence 33333 356666 8899999 77777766655556688888887755777777888988884 6776666654433 3
Q ss_pred EEEEEccCCCCeEEe
Q 022324 279 IICLMYPQFLHMLFF 293 (299)
Q Consensus 279 i~~~~~s~~g~~l~s 293 (299)
+.++.+.++|...++
T Consensus 257 ~~~~~~~~~g~l~v~ 271 (330)
T 3hxj_A 257 ESSPVIGNTDTIYFG 271 (330)
T ss_dssp CSCCEECTTSCEEEE
T ss_pred cccceEcCCCeEEEe
Confidence 444555556654443
No 235
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.57 E-value=2e-06 Score=72.05 Aligned_cols=148 Identities=9% Similarity=-0.019 Sum_probs=102.3
Q ss_pred cCCEEEEEeCCCcEEEEecCCceeEEEecCCCc-----------eeE-EEEecCCCEEEEEcCCeEEEEecCCceeeeec
Q 022324 121 KRGLILTGVGDKVMRLWSLEGYKCVEEYSLPNA-----------ASL-VDFDFDESKIVGLIGTRICIWRRNGLRSVFPS 188 (299)
Q Consensus 121 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-----------~~~-~~~~~~~~~l~~~~d~~i~v~d~~~~~~~~~~ 188 (299)
.++.++.++.++.+..+|..+++.+........ ... ... .++..++++.++.+..+|..+++.....
T Consensus 187 ~~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~v~~~~~~g~l~~~d~~tG~~~w~~ 265 (376)
T 3q7m_A 187 AFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVV-VNGVVFALAYNGNLTALDLRSGQIMWKR 265 (376)
T ss_dssp ETTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEE-ETTEEEEECTTSCEEEEETTTCCEEEEE
T ss_pred ECCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEE-ECCEEEEEecCcEEEEEECCCCcEEeec
Confidence 355788889999999999999998877764321 111 111 1333444888999999999888755544
Q ss_pred cCCccceeeeeccCCCeEEEecCCCcEEEEEcCCcceeeeccc-cCCceeEEEeCCCCeEEEEeCCCcEEEEeCCCCceE
Q 022324 189 REGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRM-HCAPVTSLSLSEDQLIISGSSLGSIAISGLSSDQRV 267 (299)
Q Consensus 189 ~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~-~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~ 267 (299)
..... ......+..++.++.++.+..+|..+++.+..... ....+...... +..++.++.+|.|.++|..+++.+
T Consensus 266 ~~~~~---~~~~~~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~-~~~l~v~~~~g~l~~~d~~tG~~~ 341 (376)
T 3q7m_A 266 ELGSV---NDFIVDGNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVLY-NGNLVVGDSEGYLHWINVEDGRFV 341 (376)
T ss_dssp CCCCE---EEEEEETTEEEEEETTCCEEEEETTTCCEEEEECTTTTSCCCCCEEE-TTEEEEECTTSEEEEEETTTCCEE
T ss_pred cCCCC---CCceEECCEEEEEcCCCeEEEEECCCCcEEEeecccCCCcccCCEEE-CCEEEEEeCCCeEEEEECCCCcEE
Confidence 33322 23334567788888899999999999998776642 12222223332 357888899999999999999988
Q ss_pred EEeecc
Q 022324 268 ATLRST 273 (299)
Q Consensus 268 ~~~~~~ 273 (299)
......
T Consensus 342 ~~~~~~ 347 (376)
T 3q7m_A 342 AQQKVD 347 (376)
T ss_dssp EEEECC
T ss_pred EEEecC
Confidence 877653
No 236
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.53 E-value=8.7e-06 Score=73.94 Aligned_cols=200 Identities=9% Similarity=-0.019 Sum_probs=117.8
Q ss_pred hhhhccccceee-----cCc--eeeEEeeccccC--------e--eEEEecCC-EEEEEeCCC-------------cEEE
Q 022324 88 ELAMKHHRFALE-----EGR--IDIDQWKAHSVG--------V--DQCRMKRG-LILTGVGDK-------------VMRL 136 (299)
Q Consensus 88 ~~~~~~~~~~l~-----~g~--~~~~~~~~h~~~--------i--~~~~~~~~-~l~s~~~dg-------------~i~i 136 (299)
.+.++|+++.++ .|. ..++.+.-.++. + ..+.|.|+ .|+.++.+. .|++
T Consensus 133 ~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~k~~~~~WsDg~~l~y~~~~~~~~~~~~~~~~~~~v~~ 212 (693)
T 3iuj_A 133 QLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKDVKFSGISWLGNEGFFYSSYDKPDGSELSARTDQHKVYF 212 (693)
T ss_dssp EEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEEEESCCCEEETTTEEEEEESSCCC-------CCCCEEEE
T ss_pred EEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCCceeccEEEeCCCEEEEEEecCcccccccccCCCcEEEE
Confidence 457888888777 343 224443322221 2 23455544 677777664 3999
Q ss_pred EecCCcee--EEEecCCC----ceeEEEEecCCCEEE-EEc----CCeEEEEecCCce---eeeeccCCccceeeeeccC
Q 022324 137 WSLEGYKC--VEEYSLPN----AASLVDFDFDESKIV-GLI----GTRICIWRRNGLR---SVFPSREGTFMKGLCMRYF 202 (299)
Q Consensus 137 wd~~~~~~--~~~~~~~~----~~~~~~~~~~~~~l~-~~~----d~~i~v~d~~~~~---~~~~~~~~~~~~~~~~~~~ 202 (299)
|++.++.. ...+.... ....+.++||+++|+ ... ...++++|+.++. ..+........ ..+.+.
T Consensus 213 ~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~--~~~~~~ 290 (693)
T 3iuj_A 213 HRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDADV--SLVDNK 290 (693)
T ss_dssp EETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSCE--EEEEEE
T ss_pred EECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCceE--EEEecc
Confidence 99887642 23333322 245689999999986 332 2489999987653 23333333222 125566
Q ss_pred CCeEE-EecC---CCcEEEEEcCCcce--eeeccccCCceeEEEeCCC-CeEEEEeC-CC--cEEEEeCCCCceEEEeec
Q 022324 203 DPEAV-VGCE---DGTARVFDMYSRKC--SQIIRMHCAPVTSLSLSED-QLIISGSS-LG--SIAISGLSSDQRVATLRS 272 (299)
Q Consensus 203 ~~~l~-s~~~---d~~i~iwd~~~~~~--~~~~~~~~~~i~~~~~~~~-~~l~~~~~-dg--~i~iwd~~~~~~~~~~~~ 272 (299)
+..++ .... .+.|..+|+.++.. ...+..+...+. .|+++ +.|+.... ++ .|++||+. +.....+..
T Consensus 291 g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~d~~-g~~~~~l~~ 367 (693)
T 3iuj_A 291 GSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDATARVEQFDYE-GKRVREVAL 367 (693)
T ss_dssp TTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETTEEEEEEECTT-SCEEEEECC
T ss_pred CCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEEECCeeEEEEEECC-CCeeEEeec
Confidence 66644 3333 36799999987654 234445554444 67776 66655554 44 68999987 444555543
Q ss_pred cCCCCcEEEEEccCCCCeEEe
Q 022324 273 TDCTGHIICLMYPQFLHMLFF 293 (299)
Q Consensus 273 ~~~~~~i~~~~~s~~g~~l~s 293 (299)
.... .+..+.++|+++.|+.
T Consensus 368 p~~~-~~~~~~~~~d~~~l~~ 387 (693)
T 3iuj_A 368 PGLG-SVSGFNGKHDDPALYF 387 (693)
T ss_dssp SSSS-EEEECCCCTTCSCEEE
T ss_pred CCCc-eEEeeecCCCCCEEEE
Confidence 3322 6788888888876654
No 237
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.52 E-value=1e-05 Score=67.67 Aligned_cols=151 Identities=7% Similarity=0.040 Sum_probs=100.3
Q ss_pred ecCCEEEEEeCCCcEEEEecCCceeEEEecCCC---------ceeEEEEe-cCCCEEEEEcCCeEEEEecCCceeeeecc
Q 022324 120 MKRGLILTGVGDKVMRLWSLEGYKCVEEYSLPN---------AASLVDFD-FDESKIVGLIGTRICIWRRNGLRSVFPSR 189 (299)
Q Consensus 120 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~---------~~~~~~~~-~~~~~l~~~~d~~i~v~d~~~~~~~~~~~ 189 (299)
..++.++.++.++.|..+|.++++.+..+.... ........ .++..++++.++.|+.+|..+++......
T Consensus 51 v~~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~ 130 (376)
T 3q7m_A 51 LADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSEKAQVYALNTSDGTVAWQTK 130 (376)
T ss_dssp EETTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred EECCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEcCCCEEEEEECCCCCEEEEEe
Confidence 356688888999999999999999887776532 12222222 23444448899999999999886544332
Q ss_pred CCccceeeeeccCCCeEEEecCCCcEEEEEcCCcceeeeccccCCce-----eEEEeCCCCeEEEEeCCCcEEEEeCCCC
Q 022324 190 EGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPV-----TSLSLSEDQLIISGSSLGSIAISGLSSD 264 (299)
Q Consensus 190 ~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i-----~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 264 (299)
....... .....+..++.++.++.+..+|..+++.+..+....... ...... +..++.++.++.|..+|..+|
T Consensus 131 ~~~~~~~-~p~~~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~-~~~v~~g~~~g~l~~~d~~tG 208 (376)
T 3q7m_A 131 VAGEALS-RPVVSDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA-FGAAVVGGDNGRVSAVLMEQG 208 (376)
T ss_dssp CSSCCCS-CCEEETTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEE-TTEEEECCTTTEEEEEETTTC
T ss_pred CCCceEc-CCEEECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE-CCEEEEEcCCCEEEEEECCCC
Confidence 2211100 111235568888899999999999999887765322111 111121 356788888999999999999
Q ss_pred ceEEEeec
Q 022324 265 QRVATLRS 272 (299)
Q Consensus 265 ~~~~~~~~ 272 (299)
+.+.....
T Consensus 209 ~~~w~~~~ 216 (376)
T 3q7m_A 209 QMIWQQRI 216 (376)
T ss_dssp CEEEEEEC
T ss_pred cEEEEEec
Confidence 98877653
No 238
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.46 E-value=7.1e-06 Score=74.17 Aligned_cols=172 Identities=11% Similarity=0.053 Sum_probs=112.5
Q ss_pred cCCEEEEEeC------CCcEEEEecCCceeEEEecCCCce---------------------------------eEEEEec
Q 022324 121 KRGLILTGVG------DKVMRLWSLEGYKCVEEYSLPNAA---------------------------------SLVDFDF 161 (299)
Q Consensus 121 ~~~~l~s~~~------dg~i~iwd~~~~~~~~~~~~~~~~---------------------------------~~~~~~~ 161 (299)
.++.++.++. ++.|+.+|..+|+.+..+...... ..+++++
T Consensus 173 ~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~ 252 (677)
T 1kb0_A 173 FKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDA 252 (677)
T ss_dssp ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEET
T ss_pred ECCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcC
Confidence 3555555553 799999999999999877642211 1367888
Q ss_pred CCCEEE-EEcCC-------------------eEEEEecCCceeeeeccCC----------ccceeeeeccCC---CeEEE
Q 022324 162 DESKIV-GLIGT-------------------RICIWRRNGLRSVFPSREG----------TFMKGLCMRYFD---PEAVV 208 (299)
Q Consensus 162 ~~~~l~-~~~d~-------------------~i~v~d~~~~~~~~~~~~~----------~~~~~~~~~~~~---~~l~s 208 (299)
++..++ ++.++ .|..+|..+++........ ....+.....++ ..++.
T Consensus 253 ~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~ 332 (677)
T 1kb0_A 253 ELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILH 332 (677)
T ss_dssp TTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEE
T ss_pred CCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEE
Confidence 888877 66553 5999999988754432111 001112222345 45888
Q ss_pred ecCCCcEEEEEcCCcceeeeccccC-----------Cce------------------------eEEEeCCC-CeEEEEeC
Q 022324 209 GCEDGTARVFDMYSRKCSQIIRMHC-----------APV------------------------TSLSLSED-QLIISGSS 252 (299)
Q Consensus 209 ~~~d~~i~iwd~~~~~~~~~~~~~~-----------~~i------------------------~~~~~~~~-~~l~~~~~ 252 (299)
++.+|.++++|..+|+.+..+.... .++ ..++++|+ .++++...
T Consensus 333 ~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~ 412 (677)
T 1kb0_A 333 APKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQ 412 (677)
T ss_dssp CCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEE
T ss_pred ECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeCh
Confidence 9999999999999999876654211 011 14678887 66666432
Q ss_pred -------------------------------------------CCcEEEEeCCCCceEEEeeccCCCCcEEEEEccCCCC
Q 022324 253 -------------------------------------------LGSIAISGLSSDQRVATLRSTDCTGHIICLMYPQFLH 289 (299)
Q Consensus 253 -------------------------------------------dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~g~ 289 (299)
.|.|..||+.+++.+.++.... ++.+..+..++.
T Consensus 413 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~---~~~~g~~~~~g~ 489 (677)
T 1kb0_A 413 NVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHVS---PWNGGTLTTAGN 489 (677)
T ss_dssp ECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEESS---SCCCCEEEETTT
T ss_pred hcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecCCCC---CCcCcceEeCCC
Confidence 2789999999999888876443 344444555666
Q ss_pred eEEeee
Q 022324 290 MLFFLC 295 (299)
Q Consensus 290 ~l~s~s 295 (299)
.++.++
T Consensus 490 ~v~~g~ 495 (677)
T 1kb0_A 490 VVFQGT 495 (677)
T ss_dssp EEEEEC
T ss_pred EEEEEC
Confidence 666654
No 239
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.41 E-value=2.4e-05 Score=68.30 Aligned_cols=168 Identities=8% Similarity=-0.002 Sum_probs=112.1
Q ss_pred EEEEEeCCCcEEEEecCCceeEEEecCC--CceeEEEE-e-cCCCEEE-EE------------------cCCeEEEEecC
Q 022324 124 LILTGVGDKVMRLWSLEGYKCVEEYSLP--NAASLVDF-D-FDESKIV-GL------------------IGTRICIWRRN 180 (299)
Q Consensus 124 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~--~~~~~~~~-~-~~~~~l~-~~------------------~d~~i~v~d~~ 180 (299)
.+++...+..|.+.|+.+.++...+..+ .....+++ + |++++++ ++ .++.+.+.|..
T Consensus 104 lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~ 183 (595)
T 1fwx_A 104 LFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDAD 183 (595)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETT
T ss_pred EEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEEECC
Confidence 3445555678999999999988855543 34445777 5 8999988 43 13489999999
Q ss_pred CceeeeeccCCccceeeeeccCCCeEEEecCCC--------------------------------------cEEEEEcCC
Q 022324 181 GLRSVFPSREGTFMKGLCMRYFDPEAVVGCEDG--------------------------------------TARVFDMYS 222 (299)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~--------------------------------------~i~iwd~~~ 222 (299)
+.+...+..-+.....+++++++.++++.+.+. .|.+.|.++
T Consensus 184 t~~v~~qI~Vgg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~ 263 (595)
T 1fwx_A 184 KWEVAWQVLVSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRK 263 (595)
T ss_dssp TTEEEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSG
T ss_pred CCeEEEEEEeCCCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcc
Confidence 877555443322233457888888866655432 477777776
Q ss_pred --cce-eeeccccCCceeEEEeCCC-CeEEEE-eCCCcEEEEeCCCCc------------eEEEeeccCCCCcEEEEEcc
Q 022324 223 --RKC-SQIIRMHCAPVTSLSLSED-QLIISG-SSLGSIAISGLSSDQ------------RVATLRSTDCTGHIICLMYP 285 (299)
Q Consensus 223 --~~~-~~~~~~~~~~i~~~~~~~~-~~l~~~-~~dg~i~iwd~~~~~------------~~~~~~~~~~~~~i~~~~~s 285 (299)
++. +..+.. .....++.++|| ++++++ ..+.+|.++|+.+.+ .+.++.... ....++|+
T Consensus 264 ~~~~~~~~~Ipv-g~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~---gP~h~aF~ 339 (595)
T 1fwx_A 264 EASSLFTRYIPI-ANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGL---GPLHTAFD 339 (595)
T ss_dssp GGCCSSEEEEEE-ESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCS---CEEEEEEC
T ss_pred cCCceeEEEEec-CCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCC---CcceEEEC
Confidence 444 444433 334678999999 655554 468999999998653 334443222 68999999
Q ss_pred CCCCeEEeeec
Q 022324 286 QFLHMLFFLCF 296 (299)
Q Consensus 286 ~~g~~l~s~s~ 296 (299)
|+| ++.+..+
T Consensus 340 ~dG-~aY~t~~ 349 (595)
T 1fwx_A 340 GRG-NAYTSLF 349 (595)
T ss_dssp TTS-EEEEEET
T ss_pred CCC-eEEEEEe
Confidence 999 7666554
No 240
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.39 E-value=0.0003 Score=55.70 Aligned_cols=175 Identities=9% Similarity=0.026 Sum_probs=108.4
Q ss_pred cCeeEEEe-c-CCE-EEEEeCCCcEEEEecCCceeEEEecCC-CceeEEEEecCCCEEE-EEc---CCeEEEEecCCce-
Q 022324 113 VGVDQCRM-K-RGL-ILTGVGDKVMRLWSLEGYKCVEEYSLP-NAASLVDFDFDESKIV-GLI---GTRICIWRRNGLR- 183 (299)
Q Consensus 113 ~~i~~~~~-~-~~~-l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~-~~~---d~~i~v~d~~~~~- 183 (299)
.....+++ + ++. .++-...+.|.+++............. .....++++|++..|+ +.. .+.|..+++....
T Consensus 79 ~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~ 158 (267)
T 1npe_A 79 GSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNR 158 (267)
T ss_dssp CCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCC
T ss_pred CCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCc
Confidence 35567777 3 344 444455678999998743322222222 3455699999766655 543 3688888887543
Q ss_pred eeeeccCCccceeeeeccCCCeE-EEecCCCcEEEEEcCCcceeeeccccCCceeEEEeCCCCeEEEEeCCCcEEEEeCC
Q 022324 184 SVFPSREGTFMKGLCMRYFDPEA-VVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSEDQLIISGSSLGSIAISGLS 262 (299)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~l-~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~ 262 (299)
..+..........+++.+++..| ++-...+.|.++|.........+.. ......++...+.++++....+.|..+|..
T Consensus 159 ~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~-~~~P~gi~~d~~~lyva~~~~~~v~~~d~~ 237 (267)
T 1npe_A 159 RILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEG-LQYPFAVTSYGKNLYYTDWKTNSVIAMDLA 237 (267)
T ss_dssp EEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEEC-CCSEEEEEEETTEEEEEETTTTEEEEEETT
T ss_pred EEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEecC-CCCceEEEEeCCEEEEEECCCCeEEEEeCC
Confidence 22221111223356888877775 4555678899999975443333322 233567776533555555567899999999
Q ss_pred CCceEEEeeccCCCCcEEEEEccCCCC
Q 022324 263 SDQRVATLRSTDCTGHIICLMYPQFLH 289 (299)
Q Consensus 263 ~~~~~~~~~~~~~~~~i~~~~~s~~g~ 289 (299)
+++.+.++...... ....+++.|++.
T Consensus 238 ~g~~~~~i~~g~~~-~p~gi~~~~~~~ 263 (267)
T 1npe_A 238 ISKEMDTFHPHKQT-RLYGITIALSQC 263 (267)
T ss_dssp TTEEEEEECCSSCC-CCCCEEEECSCC
T ss_pred CCCceEEEcccccc-ccceeeecCccC
Confidence 99998888654321 467888888864
No 241
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.32 E-value=5.9e-05 Score=68.36 Aligned_cols=151 Identities=7% Similarity=0.042 Sum_probs=99.2
Q ss_pred EecCCEEEEEeCCCcEEEEecCCceeEEEecCC-C-----ceeE-EEEecCCCEEEEE------cCCeEEEEecCCceee
Q 022324 119 RMKRGLILTGVGDKVMRLWSLEGYKCVEEYSLP-N-----AASL-VDFDFDESKIVGL------IGTRICIWRRNGLRSV 185 (299)
Q Consensus 119 ~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~-----~~~~-~~~~~~~~~l~~~------~d~~i~v~d~~~~~~~ 185 (299)
...++.++.++.|+.|..+|..+|+.+..+... . .... ..+ .++..++++ .++.|+.||..+++..
T Consensus 118 ~~~~g~v~v~~~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v-~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~ 196 (689)
T 1yiq_A 118 AVWKGKVYVGVLDGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRV-VNGKVVIGNGGAEFGVRGYVTAYDAETGKEA 196 (689)
T ss_dssp EEETTEEEEECTTSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEE-ETTEEEECCBCTTTCCBCEEEEEETTTCCEE
T ss_pred EEECCEEEEEccCCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEE-ECCEEEEEeCCCccCCCCEEEEEECCCCcEE
Confidence 345668899999999999999999998877653 1 1111 111 145555543 2689999999988754
Q ss_pred eeccCC--------------------------------ccceeeeeccCCCeEEEecCCCc-------------------
Q 022324 186 FPSREG--------------------------------TFMKGLCMRYFDPEAVVGCEDGT------------------- 214 (299)
Q Consensus 186 ~~~~~~--------------------------------~~~~~~~~~~~~~~l~s~~~d~~------------------- 214 (299)
...... ......++.+....++.+..++.
T Consensus 197 W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~ 276 (689)
T 1yiq_A 197 WRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSS 276 (689)
T ss_dssp EEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTE
T ss_pred EEecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeee
Confidence 432110 00012355566677888877653
Q ss_pred EEEEEcCCcceeeeccc--cC-------Ccee--EEEeCCC--CeEEEEeCCCcEEEEeCCCCceEEEe
Q 022324 215 ARVFDMYSRKCSQIIRM--HC-------APVT--SLSLSED--QLIISGSSLGSIAISGLSSDQRVATL 270 (299)
Q Consensus 215 i~iwd~~~~~~~~~~~~--~~-------~~i~--~~~~~~~--~~l~~~~~dg~i~iwd~~~~~~~~~~ 270 (299)
|..+|.++|+.+..++. |. .++. .+.+... ..++.++.+|.++++|..+|+.+...
T Consensus 277 v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~ 345 (689)
T 1yiq_A 277 IVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAK 345 (689)
T ss_dssp EEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEE
T ss_pred EEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccc
Confidence 99999999999887753 21 1111 2222111 37889999999999999999988544
No 242
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.30 E-value=3.9e-05 Score=64.99 Aligned_cols=182 Identities=9% Similarity=0.041 Sum_probs=118.5
Q ss_pred hhhhccccceeecC----ceeeEEeeccccCeeE-EEe-------cC--CEEEEEeCCCcEEEEecCCceeEEE----ec
Q 022324 88 ELAMKHHRFALEEG----RIDIDQWKAHSVGVDQ-CRM-------KR--GLILTGVGDKVMRLWSLEGYKCVEE----YS 149 (299)
Q Consensus 88 ~~~~~~~~~~l~~g----~~~~~~~~~h~~~i~~-~~~-------~~--~~l~s~~~dg~i~iwd~~~~~~~~~----~~ 149 (299)
.+.++++++.+.-. ...+..+...+..+.. +.. ++ ..+++.+.||.+.+.+..+++.... +.
T Consensus 181 ~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~ 260 (426)
T 3c75_H 181 MNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDCYHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFH 260 (426)
T ss_dssp GSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCS
T ss_pred eEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCceeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeec
Confidence 45667777554432 2235555444443322 221 22 2567778899988888876665532 22
Q ss_pred CCCcee--EEEEecCCCEEE-EEcCCeEEEEecCCceeee----ecc------CCc---cceeeeeccCCCeEEEecC--
Q 022324 150 LPNAAS--LVDFDFDESKIV-GLIGTRICIWRRNGLRSVF----PSR------EGT---FMKGLCMRYFDPEAVVGCE-- 211 (299)
Q Consensus 150 ~~~~~~--~~~~~~~~~~l~-~~~d~~i~v~d~~~~~~~~----~~~------~~~---~~~~~~~~~~~~~l~s~~~-- 211 (299)
.....+ ...+.+++..++ .+..+.+.+.|..+..... ... .+. ....+++++++..+++...
T Consensus 261 v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~ 340 (426)
T 3c75_H 261 TEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQR 340 (426)
T ss_dssp CTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEEC
T ss_pred cCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEeccc
Confidence 222222 267788888877 7778899999987543211 100 000 0012578888888665432
Q ss_pred --------CCcEEEEEcCCcceeeeccccCCceeEEEeCCC-C-eEEEEe-CCCcEEEEeCCCCceEEEe
Q 022324 212 --------DGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-Q-LIISGS-SLGSIAISGLSSDQRVATL 270 (299)
Q Consensus 212 --------d~~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~-~-~l~~~~-~dg~i~iwd~~~~~~~~~~ 270 (299)
++.|.++|..+.+.+..+.. ......++|+|| + +++++. .++.|.++|+.+++.++++
T Consensus 341 ~~gthk~~s~~VsVID~~T~kvv~~I~v-g~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv~tI 409 (426)
T 3c75_H 341 DEWKHKAASRFVVVLNAETGERINKIEL-GHEIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEELRSV 409 (426)
T ss_dssp CTTCTTSCEEEEEEEETTTCCEEEEEEE-EEEECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred ccccccCCCCEEEEEECCCCeEEEEEEC-CCCcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEEEEe
Confidence 35799999999999998864 335899999999 7 787777 5999999999999999987
No 243
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.28 E-value=5.1e-05 Score=59.93 Aligned_cols=145 Identities=4% Similarity=-0.060 Sum_probs=97.0
Q ss_pred EEecCC-EEEEEeCCCcEEEEecCCceeEEEecCCCceeEEEEecCCCEEE-EEcCCeEEEEecCCceeeeeccCC----
Q 022324 118 CRMKRG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIV-GLIGTRICIWRRNGLRSVFPSREG---- 191 (299)
Q Consensus 118 ~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~d~~i~v~d~~~~~~~~~~~~~---- 191 (299)
+.+.++ +.++.-.++.+.++|..+.+.+.++... ...-..++++++.++ +..++.|.++|..+.+..-...-+
T Consensus 71 i~~~g~~lyv~t~~~~~v~viD~~t~~v~~~i~~g-~~~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~ 149 (266)
T 2iwa_A 71 LTLLNEKLYQVVWLKNIGFIYDRRTLSNIKNFTHQ-MKDGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGH 149 (266)
T ss_dssp EEEETTEEEEEETTCSEEEEEETTTTEEEEEEECC-SSSCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTE
T ss_pred EEEeCCEEEEEEecCCEEEEEECCCCcEEEEEECC-CCCeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCc
Confidence 444455 4444556789999999999999988754 122244666887777 666789999999886532221111
Q ss_pred cc--ceeeeeccCCCeEEEecCCCcEEEEEcCCcceeeecccc-------------CCceeEEEeCCC--CeEEEEeCCC
Q 022324 192 TF--MKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMH-------------CAPVTSLSLSED--QLIISGSSLG 254 (299)
Q Consensus 192 ~~--~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~-------------~~~i~~~~~~~~--~~l~~~~~dg 254 (299)
.. ...+.+. ++..++....++.|.+.|..+++.+..+... ....+.|+++|+ .+++++...+
T Consensus 150 p~~~~nele~~-dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~ 228 (266)
T 2iwa_A 150 RVIRLNELEYI-NGEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWP 228 (266)
T ss_dssp ECCCEEEEEEE-TTEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCS
T ss_pred ccccceeEEEE-CCEEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCC
Confidence 11 1122333 3322444446789999999999988877531 135689999998 5777777889
Q ss_pred cEEEEeCCCC
Q 022324 255 SIAISGLSSD 264 (299)
Q Consensus 255 ~i~iwd~~~~ 264 (299)
.|...++...
T Consensus 229 ~v~~i~l~~~ 238 (266)
T 2iwa_A 229 KLFEIKLHLV 238 (266)
T ss_dssp EEEEEEEEEC
T ss_pred eEEEEEEecc
Confidence 9998887654
No 244
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.26 E-value=7e-05 Score=67.63 Aligned_cols=175 Identities=10% Similarity=0.121 Sum_probs=107.6
Q ss_pred EEe-c-CCEEEEEeCCC-------------------cEEEEecCCceeEEEecCC----------CceeEEEEecCCC--
Q 022324 118 CRM-K-RGLILTGVGDK-------------------VMRLWSLEGYKCVEEYSLP----------NAASLVDFDFDES-- 164 (299)
Q Consensus 118 ~~~-~-~~~l~s~~~dg-------------------~i~iwd~~~~~~~~~~~~~----------~~~~~~~~~~~~~-- 164 (299)
+.+ + .++++.++.++ .|..+|..+|+.+..++.. .+.+...+..+++
T Consensus 235 ~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~ 314 (668)
T 1kv9_A 235 MAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPR 314 (668)
T ss_dssp EEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEE
T ss_pred eEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEE
Confidence 455 3 34777777666 3999999999999888742 2223344445665
Q ss_pred -EEE-EEcCCeEEEEecCCceeeeeccCCcc-------------------------------------ceeeeeccCCCe
Q 022324 165 -KIV-GLIGTRICIWRRNGLRSVFPSREGTF-------------------------------------MKGLCMRYFDPE 205 (299)
Q Consensus 165 -~l~-~~~d~~i~v~d~~~~~~~~~~~~~~~-------------------------------------~~~~~~~~~~~~ 205 (299)
.++ ++.+|.++++|..+++.+........ -..+++++....
T Consensus 315 ~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~ 394 (668)
T 1kv9_A 315 KVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGL 394 (668)
T ss_dssp EEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTE
T ss_pred EEEEEECCCCEEEEEECCCCCEeccccccccccccccccccCCccccccccccCCeeEECCCCccccCCCcceECCCCCE
Confidence 455 88999999999988764421110000 001233443333
Q ss_pred EEE------------------------------------ecCCCcEEEEEcCCcceeeeccccCCceeEEEeC-CCCeEE
Q 022324 206 AVV------------------------------------GCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLS-EDQLII 248 (299)
Q Consensus 206 l~s------------------------------------~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~~~~~-~~~~l~ 248 (299)
++. ...+|.|..||+.+++.+....... +.....+. .+.+++
T Consensus 395 ~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~~-~~~~~~~~t~gg~vf 473 (668)
T 1kv9_A 395 VYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYPT-HWNGGTLSTAGNLVF 473 (668)
T ss_dssp EEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEESS-SCCCCEEEETTTEEE
T ss_pred EEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccCCC-CCcCceeEeCCCEEE
Confidence 222 1234889999999999987775332 23222222 347888
Q ss_pred EEeCCCcEEEEeCCCCceEEEeeccCCCCcEEEEEccCCCC-eEEee
Q 022324 249 SGSSLGSIAISGLSSDQRVATLRSTDCTGHIICLMYPQFLH-MLFFL 294 (299)
Q Consensus 249 ~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~g~-~l~s~ 294 (299)
+++.|+.|+.||.++|+.+..++..... .-.-+.+..+|+ |++.+
T Consensus 474 ~g~~dg~l~a~d~~tG~~l~~~~~~~~~-~~~p~~~~~~G~~yva~~ 519 (668)
T 1kv9_A 474 QGTAAGQMHAYSADKGEALWQFEAQSGI-VAAPMTFELAGRQYVAIM 519 (668)
T ss_dssp EECTTSEEEEEETTTCCEEEEEECSSCC-CSCCEEEEETTEEEEEEE
T ss_pred EECCcccchhhhhhcChhheEecCCCCc-ccCceEEEECCEEEEEEE
Confidence 8999999999999999999888765431 111223345666 44443
No 245
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.24 E-value=0.00014 Score=64.41 Aligned_cols=159 Identities=10% Similarity=-0.044 Sum_probs=99.0
Q ss_pred cEEEEecCCceeEEEecCCC----------ceeEEEEecCCC---EEE-EEcCCeEEEEecCCceeeeeccCCc-c----
Q 022324 133 VMRLWSLEGYKCVEEYSLPN----------AASLVDFDFDES---KIV-GLIGTRICIWRRNGLRSVFPSREGT-F---- 193 (299)
Q Consensus 133 ~i~iwd~~~~~~~~~~~~~~----------~~~~~~~~~~~~---~l~-~~~d~~i~v~d~~~~~~~~~~~~~~-~---- 193 (299)
.|..+|..+|+.+..++... ..+.+....+++ .++ ++.+|.++++|..+++.+....... .
T Consensus 273 ~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~ 352 (571)
T 2ad6_A 273 TIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFK 352 (571)
T ss_dssp EEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEE
T ss_pred EEEEEecCCCcEEEEecCCCCcccccccCCCCEEEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCccccc
Confidence 69999999999988876321 122233335674 455 8889999999998876443221110 0
Q ss_pred -----------------------------------ceeeeeccCCCeEEEec----------------------------
Q 022324 194 -----------------------------------MKGLCMRYFDPEAVVGC---------------------------- 210 (299)
Q Consensus 194 -----------------------------------~~~~~~~~~~~~l~s~~---------------------------- 210 (299)
-...++++....++...
T Consensus 353 ~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~ 432 (571)
T 2ad6_A 353 KVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMY 432 (571)
T ss_dssp EECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEE
T ss_pred cccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccccccceec
Confidence 00123444444443321
Q ss_pred ---------CCCcEEEEEcCCcceeeeccccCCceeEEEeC-CCCeEEEEeCCCcEEEEeCCCCceEEEeeccCCCCcEE
Q 022324 211 ---------EDGTARVFDMYSRKCSQIIRMHCAPVTSLSLS-EDQLIISGSSLGSIAISGLSSDQRVATLRSTDCTGHII 280 (299)
Q Consensus 211 ---------~d~~i~iwd~~~~~~~~~~~~~~~~i~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~i~ 280 (299)
.++.+..||+.+++.+..+... .++....+. .+..++.++.||.|+.+|.++|+.+.+++..... .-.
T Consensus 433 ~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~-~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~-~~~ 510 (571)
T 2ad6_A 433 PGPNGPTKKEMGQIRAFDLTTGKAKWTKWEK-FAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKMPSGG-IGS 510 (571)
T ss_dssp ECTTSTTSCCCEEEEEECTTTCCEEEEEEES-SCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCC-CSC
T ss_pred cCccccCCCCCCeEEEEECCCCCEEEEecCC-CCccceeEEECCCEEEEEcCCCeEEEEECCCCCEEEEEeCCCCc-Eee
Confidence 3578999999999988777532 222222222 3467777999999999999999999888755431 111
Q ss_pred EEEccCCCCeEEe
Q 022324 281 CLMYPQFLHMLFF 293 (299)
Q Consensus 281 ~~~~s~~g~~l~s 293 (299)
-+.+..+|+.+++
T Consensus 511 p~~~~~~G~~yv~ 523 (571)
T 2ad6_A 511 PMTYSFKGKQYIG 523 (571)
T ss_dssp CEEEEETTEEEEE
T ss_pred eEEEEECCEEEEE
Confidence 2335567875554
No 246
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.24 E-value=9.9e-05 Score=60.90 Aligned_cols=151 Identities=14% Similarity=0.072 Sum_probs=90.3
Q ss_pred eEEEecCCCceeEEEEecCCCEEEEE---cCCeEEEEecCCce-eeeec----cCCcc--ceeeeeccCCCeEEEecC--
Q 022324 144 CVEEYSLPNAASLVDFDFDESKIVGL---IGTRICIWRRNGLR-SVFPS----REGTF--MKGLCMRYFDPEAVVGCE-- 211 (299)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~l~~~---~d~~i~v~d~~~~~-~~~~~----~~~~~--~~~~~~~~~~~~l~s~~~-- 211 (299)
.+..+. ..+..++++++++.+++. .++.+.+|.+.++. ..+.. ..++. ...+++.+++..+++-..
T Consensus 11 ~v~~~~--~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~ 88 (343)
T 2qe8_A 11 VVAELS--LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGLIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQ 88 (343)
T ss_dssp EEEEES--SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEEEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHH
T ss_pred EEEEcC--CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCeecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCC
Confidence 344443 445569999999887743 23424444443332 21111 11111 123456666544443322
Q ss_pred ---CCcEEEEEcCCcceeeeccc------cCCceeEEEeCCC-C-eEEEEe---CCCcEEEEeCCCCceEEEeeccCC--
Q 022324 212 ---DGTARVFDMYSRKCSQIIRM------HCAPVTSLSLSED-Q-LIISGS---SLGSIAISGLSSDQRVATLRSTDC-- 275 (299)
Q Consensus 212 ---d~~i~iwd~~~~~~~~~~~~------~~~~i~~~~~~~~-~-~l~~~~---~dg~i~iwd~~~~~~~~~~~~~~~-- 275 (299)
++.|.+||+.+++.+..+.. +...+..++++++ . .+++.. .++.|.+||+.+++..+.+..|..
T Consensus 89 ~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~ 168 (343)
T 2qe8_A 89 SKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIA 168 (343)
T ss_dssp HTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTS
T ss_pred cCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCccc
Confidence 57899999998887665542 2235689999975 4 445554 578999999988877665533210
Q ss_pred -------------------------CCcEEEEEccCCCCeEEeeec
Q 022324 276 -------------------------TGHIICLMYPQFLHMLFFLCF 296 (299)
Q Consensus 276 -------------------------~~~i~~~~~s~~g~~l~s~s~ 296 (299)
...+..++|+|+|+.|+.+..
T Consensus 169 ~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~ 214 (343)
T 2qe8_A 169 PEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPM 214 (343)
T ss_dssp CCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEES
T ss_pred ccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeC
Confidence 013688999999998887754
No 247
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.21 E-value=0.00014 Score=56.84 Aligned_cols=149 Identities=13% Similarity=0.038 Sum_probs=93.8
Q ss_pred eeEEEecCCCceeE--EEEecCCCEEE-EEcCC--eEEEEecCCceeeeeccCCccceeeeeccCCCeEEE-ecCCCcEE
Q 022324 143 KCVEEYSLPNAASL--VDFDFDESKIV-GLIGT--RICIWRRNGLRSVFPSREGTFMKGLCMRYFDPEAVV-GCEDGTAR 216 (299)
Q Consensus 143 ~~~~~~~~~~~~~~--~~~~~~~~~l~-~~~d~--~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s-~~~d~~i~ 216 (299)
+.+.++........ +.|+ ++.+.. .+.+| .|+++|+.+++...............+.+.+..++. .-.++.+.
T Consensus 32 ~vv~~~phd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~~~~v~ 110 (262)
T 3nol_A 32 QIVHSYPHDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWKNGLGF 110 (262)
T ss_dssp EEEEEEECCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEE
T ss_pred EEEEEecCCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEeeCCEEE
Confidence 45667765554433 8888 554444 44454 899999998864433322222223345566777554 44688999
Q ss_pred EEEcCCcceeeeccccCCceeEEEeCCCCeEEEEeCCCcEEEEeCCCCceEEEeeccCCC---CcEEEEEccCCCCeEEe
Q 022324 217 VFDMYSRKCSQIIRMHCAPVTSLSLSEDQLIISGSSLGSIAISGLSSDQRVATLRSTDCT---GHIICLMYPQFLHMLFF 293 (299)
Q Consensus 217 iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~---~~i~~~~~s~~g~~l~s 293 (299)
+||..+.+.+.++.... .-..++.. ++.|+.+..++.|.++|..+.+.+.++...... ..++.+.|. +|+ |.+
T Consensus 111 v~D~~t~~~~~ti~~~~-eG~glt~d-g~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~-lya 186 (262)
T 3nol_A 111 VWNIRNLRQVRSFNYDG-EGWGLTHN-DQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGE-IFA 186 (262)
T ss_dssp EEETTTCCEEEEEECSS-CCCCEEEC-SSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTE-EEE
T ss_pred EEECccCcEEEEEECCC-CceEEecC-CCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCE-EEE
Confidence 99999999999886432 22344432 245555555788999999999998888664221 145567776 664 445
Q ss_pred eec
Q 022324 294 LCF 296 (299)
Q Consensus 294 ~s~ 296 (299)
+.+
T Consensus 187 n~w 189 (262)
T 3nol_A 187 NVW 189 (262)
T ss_dssp EET
T ss_pred EEc
Confidence 444
No 248
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.19 E-value=0.00019 Score=63.62 Aligned_cols=79 Identities=15% Similarity=0.111 Sum_probs=54.0
Q ss_pred CCcEEEEEcCCcceeeeccccCCceeEEE-eCCCCeEEEEeCCCcEEEEeCCCCceEEEeeccCCCCcEEEEEccCCCCe
Q 022324 212 DGTARVFDMYSRKCSQIIRMHCAPVTSLS-LSEDQLIISGSSLGSIAISGLSSDQRVATLRSTDCTGHIICLMYPQFLHM 290 (299)
Q Consensus 212 d~~i~iwd~~~~~~~~~~~~~~~~i~~~~-~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~ 290 (299)
+|.|..||+.+++.+....... ++..-. ...+.+++.++.|+.++.||.++|+.+.+++..... .-.-+.+..+|+.
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~~~-~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~~~~~g~-~a~P~~y~~~G~q 542 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKEHL-PLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGI-VSPPITWEQDGEQ 542 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEESS-CCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCC-CSCCEEEEETTEE
T ss_pred cceEEEEECCCCCEEEEecCCC-CCcccceEeCCCEEEEECCCCcEEEEECCCCCEEEEecCCCCc-ccCceEEEECCEE
Confidence 6789999999999887765322 222111 113467888999999999999999999998765531 1112556678874
Q ss_pred EE
Q 022324 291 LF 292 (299)
Q Consensus 291 l~ 292 (299)
.+
T Consensus 543 Yv 544 (582)
T 1flg_A 543 YL 544 (582)
T ss_dssp EE
T ss_pred EE
Confidence 33
No 249
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.11 E-value=0.002 Score=50.87 Aligned_cols=177 Identities=10% Similarity=-0.025 Sum_probs=105.2
Q ss_pred cCeeEEEe-c-CC-EEEEEeCCCcEEEEecCCceeEEEecCC-CceeEEEEecCCCEEE-E-EcCCeEEEEecCCce-ee
Q 022324 113 VGVDQCRM-K-RG-LILTGVGDKVMRLWSLEGYKCVEEYSLP-NAASLVDFDFDESKIV-G-LIGTRICIWRRNGLR-SV 185 (299)
Q Consensus 113 ~~i~~~~~-~-~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~-~-~~d~~i~v~d~~~~~-~~ 185 (299)
.....+++ + ++ ++++-..++.|..++.........+... ..+..+++++++..++ + ...+.|.+++..+.. ..
T Consensus 36 ~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~ 115 (267)
T 1npe_A 36 KVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRV 115 (267)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE
T ss_pred CcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEE
Confidence 34567777 3 34 4445556789999998866544333322 3455699999776665 4 346799999987643 22
Q ss_pred eeccCCccceeeeeccCCCeEEEecC---CCcEEEEEcCCcceeeecc-ccCCceeEEEeCCC-C-eEEEEeCCCcEEEE
Q 022324 186 FPSREGTFMKGLCMRYFDPEAVVGCE---DGTARVFDMYSRKCSQIIR-MHCAPVTSLSLSED-Q-LIISGSSLGSIAIS 259 (299)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~l~s~~~---d~~i~iwd~~~~~~~~~~~-~~~~~i~~~~~~~~-~-~l~~~~~dg~i~iw 259 (299)
+..........+++.+.+..++.+.. .+.|..+++.. +....+. ........++++++ . ++++-...+.|.++
T Consensus 116 ~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg-~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~ 194 (267)
T 1npe_A 116 LFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDG-TNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECL 194 (267)
T ss_dssp EECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTS-CCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred EEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCC-CCcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEE
Confidence 21111122334678887666555443 46788888763 3333221 22345789999986 5 44555567899999
Q ss_pred eCCCCceEEEeeccCCCCcEEEEEccCCCCeEEeee
Q 022324 260 GLSSDQRVATLRSTDCTGHIICLMYPQFLHMLFFLC 295 (299)
Q Consensus 260 d~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~s~s 295 (299)
|+........+... . ....++.. +..|..+.
T Consensus 195 ~~~g~~~~~~~~~~-~--~P~gi~~d--~~~lyva~ 225 (267)
T 1npe_A 195 NPAQPGRRKVLEGL-Q--YPFAVTSY--GKNLYYTD 225 (267)
T ss_dssp ETTEEEEEEEEECC-C--SEEEEEEE--TTEEEEEE
T ss_pred ecCCCceEEEecCC-C--CceEEEEe--CCEEEEEE
Confidence 99754433333322 2 45667654 44555444
No 250
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.09 E-value=0.00027 Score=55.36 Aligned_cols=148 Identities=7% Similarity=-0.062 Sum_probs=94.2
Q ss_pred eeEEEecCCCceeE--EEEecCCCEEE-EEcCCeEEEEecCCceeeeeccCCccceeeeeccCCCeEE-EecCCCcEEEE
Q 022324 143 KCVEEYSLPNAASL--VDFDFDESKIV-GLIGTRICIWRRNGLRSVFPSREGTFMKGLCMRYFDPEAV-VGCEDGTARVF 218 (299)
Q Consensus 143 ~~~~~~~~~~~~~~--~~~~~~~~~l~-~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-s~~~d~~i~iw 218 (299)
+.+.++........ +.|+. +.+.. .+.+|.|+++|+.+++..... .........+.+.+..++ ..-.++.+.+|
T Consensus 44 ~Vv~~~phd~~~ftqGL~~~~-~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~~Ly~ltw~~~~v~V~ 121 (268)
T 3nok_A 44 HIIREYPHATNAFTQGLVFHQ-GHFFESTGHQGTLRQLSLESAQPVWME-RLGNIFAEGLASDGERLYQLTWTEGLLFTW 121 (268)
T ss_dssp EEEEEEECCTTCCEEEEEEET-TEEEEEETTTTEEEECCSSCSSCSEEE-ECTTCCEEEEEECSSCEEEEESSSCEEEEE
T ss_pred EEEEEEcCCCccccceEEEEC-CEEEEEcCCCCEEEEEECCCCcEEeEE-CCCCcceeEEEEeCCEEEEEEccCCEEEEE
Confidence 55667765544433 77763 33333 666789999999988643332 222222234555666644 44568899999
Q ss_pred EcCCcceeeeccccCCceeEEEeCCCCeEEEEeCCCcEEEEeCCCCceEEEeeccCCC---CcEEEEEccCCCCeEEeee
Q 022324 219 DMYSRKCSQIIRMHCAPVTSLSLSEDQLIISGSSLGSIAISGLSSDQRVATLRSTDCT---GHIICLMYPQFLHMLFFLC 295 (299)
Q Consensus 219 d~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~---~~i~~~~~s~~g~~l~s~s 295 (299)
|..+.+.+.++... ..-..++.. ++.|+.+..++.|.++|..+.+.+.++...... ..++.+.|. +|+ |.++.
T Consensus 122 D~~Tl~~~~ti~~~-~eGwGLt~D-g~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~-lyanv 197 (268)
T 3nok_A 122 SGMPPQRERTTRYS-GEGWGLCYW-NGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGV-IYANI 197 (268)
T ss_dssp ETTTTEEEEEEECS-SCCCCEEEE-TTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTE-EEEEE
T ss_pred ECCcCcEEEEEeCC-CceeEEecC-CCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCE-EEEEE
Confidence 99999999988643 223455532 255666667899999999999998888654321 145667776 664 44544
Q ss_pred c
Q 022324 296 F 296 (299)
Q Consensus 296 ~ 296 (299)
+
T Consensus 198 w 198 (268)
T 3nok_A 198 W 198 (268)
T ss_dssp T
T ss_pred C
Confidence 3
No 251
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.08 E-value=0.00049 Score=61.09 Aligned_cols=80 Identities=8% Similarity=0.037 Sum_probs=53.3
Q ss_pred CCCcEEEEEcCCcceeeeccccCCcee-E-EEeCCCCeEEEEeCCCcEEEEeCCCCceEEEeeccCCCCcEEEEEccCCC
Q 022324 211 EDGTARVFDMYSRKCSQIIRMHCAPVT-S-LSLSEDQLIISGSSLGSIAISGLSSDQRVATLRSTDCTGHIICLMYPQFL 288 (299)
Q Consensus 211 ~d~~i~iwd~~~~~~~~~~~~~~~~i~-~-~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~g 288 (299)
..|.+..||+.+++.+..... ..+.. . +. ..+.+++.++.|+.|+.||.++|+.+.+++..... ...-+.+..+|
T Consensus 451 ~~G~l~A~D~~tG~~~W~~~~-~~~~~~g~~~-tagg~vf~gt~dg~l~A~D~~tG~~lW~~~l~~g~-~~~P~~y~~~G 527 (599)
T 1w6s_A 451 GLGQIKAYNAITGDYKWEKME-RFAVWGGTMA-TAGDLVFYGTLDGYLKARDSDTGDLLWKFKIPSGA-IGYPMTYTHKG 527 (599)
T ss_dssp CCEEEEEECTTTCCEEEEEEE-SSCCCSBCEE-ETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCC-CSCCEEEEETT
T ss_pred CcCeEEEEECCCCCEEeEecC-CCCccCcceE-ecCCEEEEECCCCeEEEEECCCCCEEEEeeCCCCc-EeccEEEEeCC
Confidence 357899999999998877642 22221 1 22 13367777999999999999999999888755431 11224455677
Q ss_pred C-eEEe
Q 022324 289 H-MLFF 293 (299)
Q Consensus 289 ~-~l~s 293 (299)
+ |+++
T Consensus 528 ~qyv~~ 533 (599)
T 1w6s_A 528 TQYVAI 533 (599)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 6 4443
No 252
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.08 E-value=0.0021 Score=50.31 Aligned_cols=186 Identities=9% Similarity=0.031 Sum_probs=118.7
Q ss_pred EeeccccCeeEEEe-cC-C-EEEEEeCCCcEEEEecCCceeEEEecCC--CceeEEEEecCCCEEEEE-cCCeEEEEecC
Q 022324 107 QWKAHSVGVDQCRM-KR-G-LILTGVGDKVMRLWSLEGYKCVEEYSLP--NAASLVDFDFDESKIVGL-IGTRICIWRRN 180 (299)
Q Consensus 107 ~~~~h~~~i~~~~~-~~-~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~-~d~~i~v~d~~ 180 (299)
.+.+-.+.+..+++ ++ + ++++...++.|...|.. ++.+..+... ...-.+++.+++.++++. .++.+.++++.
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~ 99 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLT 99 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEEC
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcC
Confidence 44566678999999 44 3 55567788999999988 8888877543 233337888888765543 56788998876
Q ss_pred Ccee-----eee-----ccCCccceeeeeccCCCeEEEecCCCcEEEEEcC---Ccceeeecc-------ccCCceeEEE
Q 022324 181 GLRS-----VFP-----SREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMY---SRKCSQIIR-------MHCAPVTSLS 240 (299)
Q Consensus 181 ~~~~-----~~~-----~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~---~~~~~~~~~-------~~~~~i~~~~ 240 (299)
.... ... ...+.....+++.+.+..|+++.+.....+|..+ ....+..+. .....+.+++
T Consensus 100 ~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~ 179 (255)
T 3qqz_A 100 PNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAE 179 (255)
T ss_dssp TTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEE
T ss_pred CCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEE
Confidence 4431 111 1111222357888888887777665555555543 111111110 1233578999
Q ss_pred eCCC--CeEEEEeCCCcEEEEeCCCCceEEEeeccCC-------CCcEEEEEccCCCCeEEee
Q 022324 241 LSED--QLIISGSSLGSIAISGLSSDQRVATLRSTDC-------TGHIICLMYPQFLHMLFFL 294 (299)
Q Consensus 241 ~~~~--~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~-------~~~i~~~~~s~~g~~l~s~ 294 (299)
++|. ++++.......|..+|.. ++.+..+.-..+ ....-.|+|+++|++.+++
T Consensus 180 ~dp~tg~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIvs 241 (255)
T 3qqz_A 180 FNQQKNTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIVS 241 (255)
T ss_dssp EETTTTEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEEE
T ss_pred EcCCCCeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEEc
Confidence 9987 577777778889999975 776666644321 0156899999999866653
No 253
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.05 E-value=0.0025 Score=52.10 Aligned_cols=169 Identities=14% Similarity=0.117 Sum_probs=105.8
Q ss_pred EEEEEeCCCcEEEEecCCceeEEEecCCCceeEEEEec----CCCE--EE--EEc---CCeEEEEecC--Cce-eeeec-
Q 022324 124 LILTGVGDKVMRLWSLEGYKCVEEYSLPNAASLVDFDF----DESK--IV--GLI---GTRICIWRRN--GLR-SVFPS- 188 (299)
Q Consensus 124 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~----~~~~--l~--~~~---d~~i~v~d~~--~~~-~~~~~- 188 (299)
+++.....+-+.+||+ +|+.++.+.. .....+.+-| .++. ++ ... +++|.+|++. +.. .....
T Consensus 42 ~ii~t~k~~gL~Vydl-~G~~l~~~~~-g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~~i~~~ 119 (355)
T 3amr_A 42 KLITTNKKSGLVVYSL-DGKMLHSYNT-GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQSMTDP 119 (355)
T ss_dssp EEEEEETTTEEEEEET-TSCEEEEECC-SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEEECSCT
T ss_pred EEEEEcCCCCEEEEcC-CCcEEEEccC-CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCceeecccc
Confidence 6777778889999999 7999988864 2233344433 3332 33 333 4689999774 322 11111
Q ss_pred --c--CC-ccceeeee--ccCCC--eEEEecCCCcEEEEEcC-------CcceeeeccccCCceeEEEeCCC-CeEEEEe
Q 022324 189 --R--EG-TFMKGLCM--RYFDP--EAVVGCEDGTARVFDMY-------SRKCSQIIRMHCAPVTSLSLSED-QLIISGS 251 (299)
Q Consensus 189 --~--~~-~~~~~~~~--~~~~~--~l~s~~~d~~i~iwd~~-------~~~~~~~~~~~~~~i~~~~~~~~-~~l~~~~ 251 (299)
. .. .....+|+ ++... ++++...+|.+..|++. +.+.++++.. ...+-.+...+. ..|..+-
T Consensus 120 ~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~l-gsq~EgcvvDd~~g~Lyv~e 198 (355)
T 3amr_A 120 DHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKM-NSQTEGMAADDEYGRLYIAE 198 (355)
T ss_dssp TSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEEC-SSCEEEEEEETTTTEEEEEE
T ss_pred ccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecC-CCCcceEEEcCCCCeEEEec
Confidence 0 11 22223566 55433 47778888999999883 3456777754 456888888887 8999999
Q ss_pred CCCcEEEEeCC-----CCceEEEeeccCCCCcEEEEEc--cCCCC-eEEeee
Q 022324 252 SLGSIAISGLS-----SDQRVATLRSTDCTGHIICLMY--PQFLH-MLFFLC 295 (299)
Q Consensus 252 ~dg~i~iwd~~-----~~~~~~~~~~~~~~~~i~~~~~--s~~g~-~l~s~s 295 (299)
++.-|..++.+ +++.+..+....-...+..|++ .++|+ ||+++|
T Consensus 199 Ed~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSs 250 (355)
T 3amr_A 199 EDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASS 250 (355)
T ss_dssp TTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEE
T ss_pred ccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEc
Confidence 98777777754 3455655532211115788887 56666 777766
No 254
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.03 E-value=0.00075 Score=59.73 Aligned_cols=152 Identities=7% Similarity=-0.099 Sum_probs=95.8
Q ss_pred EecCCEEEEEeCCCcEEEEecCCceeEEEecCCC-----ceeE-EEEecCCCEEEEEc------CCeEEEEecCCceeee
Q 022324 119 RMKRGLILTGVGDKVMRLWSLEGYKCVEEYSLPN-----AASL-VDFDFDESKIVGLI------GTRICIWRRNGLRSVF 186 (299)
Q Consensus 119 ~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-----~~~~-~~~~~~~~~l~~~~------d~~i~v~d~~~~~~~~ 186 (299)
...++.++.++.|+.+..+|..+|+.+..+.... .... ..+. ++..++++. ++.|+.+|..+++...
T Consensus 112 ~~~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~-~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W 190 (571)
T 2ad6_A 112 AYGAGQIVKKQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVA-KDTVLMGCSGAELGVRGAVNAFDLKTGELKW 190 (571)
T ss_dssp EEETTEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEE-TTEEEEECBCGGGTCCCEEEEEETTTCCEEE
T ss_pred EEECCEEEEEeCCCEEEEEECCCCCEEEEecCCCCCccceeccCCEEE-CCEEEEEecCCccCCCCEEEEEECCCCcEEE
Confidence 3456688888999999999999999988776443 1111 1121 444444554 7899999999886544
Q ss_pred eccCCccc---------------------------------------eeeeeccCCCeEEEecCC---------------
Q 022324 187 PSREGTFM---------------------------------------KGLCMRYFDPEAVVGCED--------------- 212 (299)
Q Consensus 187 ~~~~~~~~---------------------------------------~~~~~~~~~~~l~s~~~d--------------- 212 (299)
........ ...++.+....++.+..+
T Consensus 191 ~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y 270 (571)
T 2ad6_A 191 RAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKW 270 (571)
T ss_dssp EEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTT
T ss_pred EEccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCcee
Confidence 32211100 012333344455555432
Q ss_pred -CcEEEEEcCCcceeeecccc--C--------CceeEEEeCCC-C---eEEEEeCCCcEEEEeCCCCceEEEeec
Q 022324 213 -GTARVFDMYSRKCSQIIRMH--C--------APVTSLSLSED-Q---LIISGSSLGSIAISGLSSDQRVATLRS 272 (299)
Q Consensus 213 -~~i~iwd~~~~~~~~~~~~~--~--------~~i~~~~~~~~-~---~l~~~~~dg~i~iwd~~~~~~~~~~~~ 272 (299)
+.|..+|.++++.+..++.. . .++. +....+ + .++.++.+|.+.++|..+|+.+.....
T Consensus 271 ~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l-~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~ 344 (571)
T 2ad6_A 271 TMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVL-TDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKV 344 (571)
T ss_dssp TTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEES
T ss_pred EEEEEEEecCCCcEEEEecCCCCcccccccCCCCEE-EecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecc
Confidence 35999999999998777522 1 2221 111123 2 577888999999999999998877653
No 255
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.03 E-value=0.0027 Score=58.52 Aligned_cols=180 Identities=11% Similarity=0.016 Sum_probs=112.8
Q ss_pred cCeeEEEe-cCCEEEEEeCCCcEEEEecCCceeEEEec-------CCCceeEEEEecCCCEEEEEcCCeEEEEecCCcee
Q 022324 113 VGVDQCRM-KRGLILTGVGDKVMRLWSLEGYKCVEEYS-------LPNAASLVDFDFDESKIVGLIGTRICIWRRNGLRS 184 (299)
Q Consensus 113 ~~i~~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-------~~~~~~~~~~~~~~~~l~~~~d~~i~v~d~~~~~~ 184 (299)
..|.++.. +++.|..|+.++-|..++..+.+...... ....+.++..++++++-+|+.++.+..|+..+...
T Consensus 310 ~~i~~i~~D~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~lWiGt~~~Gl~~~~~~~~~~ 389 (795)
T 4a2l_A 310 RSVRSIFMDSQGGMWLGTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKDKNLWIGTNDGGLNLYNPITQRF 389 (795)
T ss_dssp SCEEEEEECTTSCEEEEESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECTTSCEEEEESSSCEEEECTTTCCE
T ss_pred CcEEEEEEeCCcCEEEEECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECCCCCEEEEECCCCeEEEcCCCCcE
Confidence 56888877 45588888888889999877654332211 12234457778888877799888999999887642
Q ss_pred e-eeccC------Cccceeeeecc--CCCeEEEecCCCcEEEEEcCCcceeeecc----ccCCceeEEEeCCCCeEEEEe
Q 022324 185 V-FPSRE------GTFMKGLCMRY--FDPEAVVGCEDGTARVFDMYSRKCSQIIR----MHCAPVTSLSLSEDQLIISGS 251 (299)
Q Consensus 185 ~-~~~~~------~~~~~~~~~~~--~~~~l~s~~~d~~i~iwd~~~~~~~~~~~----~~~~~i~~~~~~~~~~l~~~~ 251 (299)
. +.... -....+.++.. .+..|..|..++-+..+|..+++...... .....|.++...++..|..|+
T Consensus 390 ~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt 469 (795)
T 4a2l_A 390 TSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGT 469 (795)
T ss_dssp EEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEE
T ss_pred EEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEe
Confidence 2 21110 01112334433 33327778887789999998766433221 124568899888773345555
Q ss_pred CCCcEEEEeCCCCceEEEeecc-----CCCCcEEEEEccCCCCeEEee
Q 022324 252 SLGSIAISGLSSDQRVATLRST-----DCTGHIICLMYPQFLHMLFFL 294 (299)
Q Consensus 252 ~dg~i~iwd~~~~~~~~~~~~~-----~~~~~i~~~~~s~~g~~l~s~ 294 (299)
.+ -|.+||..+++.. .+... .....|.++..+++|.+.+..
T Consensus 470 ~~-Gl~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt 515 (795)
T 4a2l_A 470 LS-ALVRFNPEQRSFT-TIEKEKDGTPVVSKQITTLFRDSHKRLWIGG 515 (795)
T ss_dssp SS-CEEEEETTTTEEE-ECCBCTTCCBCCCCCEEEEEECTTCCEEEEE
T ss_pred cC-ceeEEeCCCCeEE-EccccccccccCCceEEEEEECCCCCEEEEe
Confidence 54 5999998876543 23211 001279999999999876654
No 256
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.02 E-value=0.0023 Score=59.02 Aligned_cols=178 Identities=10% Similarity=0.070 Sum_probs=115.1
Q ss_pred cCeeEEEe-cCCEEEEEeCCCcEEEEecCCceeEEEecC--------CCceeEEEEecCCCEEEEEcCCeEEEEecCCce
Q 022324 113 VGVDQCRM-KRGLILTGVGDKVMRLWSLEGYKCVEEYSL--------PNAASLVDFDFDESKIVGLIGTRICIWRRNGLR 183 (299)
Q Consensus 113 ~~i~~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~--------~~~~~~~~~~~~~~~l~~~~d~~i~v~d~~~~~ 183 (299)
..|.++.. +++.|..|+.+ -|.+||..+++....... ...+.++..++++.+-+|+.++-|..|+..+..
T Consensus 263 ~~i~~i~~d~~g~lWigt~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWigt~~~Gl~~~~~~~~~ 341 (795)
T 4a2l_A 263 NYIRSLAMDSQNRLWIGTFN-DLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGGMWLGTYFGGLNYYHPIRNR 341 (795)
T ss_dssp SBEEEEEECTTSCEEEEESS-CEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSCEEEEESSSCEEEECGGGGS
T ss_pred CeEEEEEEcCCCCEEEEeCC-hhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcCEEEEECCCCeEEeCCCccc
Confidence 45888877 45567677766 588899887765443221 123455888888888889988999999876553
Q ss_pred ee-eeccC---C-ccceeeeeccCCC-eEEEecCCCcEEEEEcCCcceeeeccc--------cCCceeEEEeCCC-CeEE
Q 022324 184 SV-FPSRE---G-TFMKGLCMRYFDP-EAVVGCEDGTARVFDMYSRKCSQIIRM--------HCAPVTSLSLSED-QLII 248 (299)
Q Consensus 184 ~~-~~~~~---~-~~~~~~~~~~~~~-~l~s~~~d~~i~iwd~~~~~~~~~~~~--------~~~~i~~~~~~~~-~~l~ 248 (299)
.. +.... + ....+.++..+.+ .+..|+.++-|..||..+++....... ....|.++...++ ..|.
T Consensus 342 ~~~~~~~~~~~~l~~~~V~~i~~d~~g~lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lW 421 (795)
T 4a2l_A 342 FKNIRNIPYKNSLSDNVVSCIVEDKDKNLWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVY 421 (795)
T ss_dssp SEEECCCTTSSSCSCSSEEEEEECTTSCEEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEE
T ss_pred ceEEcCCCCCCCCCCCeeEEEEECCCCCEEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEE
Confidence 21 11110 0 1122445544433 477788888899999887654332211 2356889988777 5377
Q ss_pred EEeCCCcEEEEeCCCCceEEEeec-----cCCCCcEEEEEccCCCCeEEee
Q 022324 249 SGSSLGSIAISGLSSDQRVATLRS-----TDCTGHIICLMYPQFLHMLFFL 294 (299)
Q Consensus 249 ~~~~dg~i~iwd~~~~~~~~~~~~-----~~~~~~i~~~~~s~~g~~l~s~ 294 (299)
.|+.++-|..||..+++.. .+.. ... .|.++...++|.+.+..
T Consensus 422 igt~~~Gl~~~d~~~~~~~-~~~~~~~~l~~~--~v~~i~~d~~g~lwigt 469 (795)
T 4a2l_A 422 IGTHAGGLSILHRNSGQVE-NFNQRNSQLVNE--NVYAILPDGEGNLWLGT 469 (795)
T ss_dssp EEETTTEEEEEETTTCCEE-EECTTTSCCSCS--CEEEEEECSSSCEEEEE
T ss_pred EEeCcCceeEEeCCCCcEE-EeecCCCCcCCC--eeEEEEECCCCCEEEEe
Confidence 7888777999999877643 3322 122 79999999888866553
No 257
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.01 E-value=0.0035 Score=50.61 Aligned_cols=180 Identities=12% Similarity=0.038 Sum_probs=103.0
Q ss_pred cCeeEEEe-cCC-EEEEEe-CCC-cEEEEecCCceeEEEecCCC--ceeEEEEecCCCEEEEE-cCCeEEEEecCCce-e
Q 022324 113 VGVDQCRM-KRG-LILTGV-GDK-VMRLWSLEGYKCVEEYSLPN--AASLVDFDFDESKIVGL-IGTRICIWRRNGLR-S 184 (299)
Q Consensus 113 ~~i~~~~~-~~~-~l~s~~-~dg-~i~iwd~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~-~d~~i~v~d~~~~~-~ 184 (299)
.....+.+ +++ ++++.. .++ .|..+|..+++......... ....++..+++..+++. .++.|+++|..+.. .
T Consensus 72 ~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~ 151 (306)
T 2p4o_A 72 GKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGS 151 (306)
T ss_dssp SEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEE
T ss_pred CCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEe
Confidence 35677888 555 433333 233 46667777777544333222 11224444555444444 58899999987542 1
Q ss_pred ee--e------ccCCccceeeeeccCCCeE-EEecCCCcEEEEEcCC-cce--eeeccccCCceeEEEeCCC-CeEEEEe
Q 022324 185 VF--P------SREGTFMKGLCMRYFDPEA-VVGCEDGTARVFDMYS-RKC--SQIIRMHCAPVTSLSLSED-QLIISGS 251 (299)
Q Consensus 185 ~~--~------~~~~~~~~~~~~~~~~~~l-~s~~~d~~i~iwd~~~-~~~--~~~~~~~~~~i~~~~~~~~-~~l~~~~ 251 (299)
+. . ...........+++++..+ ++-...+.|..+|+.. ++. ...+. .......++++++ +++++..
T Consensus 152 v~~~~~~~~~~~~~~~~~~pngis~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~-~~~~P~gi~vd~dG~l~va~~ 230 (306)
T 2p4o_A 152 IWLEHPMLARSNSESVFPAANGLKRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFV-EQTNIDDFAFDVEGNLYGATH 230 (306)
T ss_dssp EEEECGGGSCSSTTCCSCSEEEEEEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEE-ESCCCSSEEEBTTCCEEEECB
T ss_pred EEEECCccccccccCCCCcCCCcCcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEe-ccCCCCCeEECCCCCEEEEeC
Confidence 11 0 0111111122336777665 4555678899999874 322 11221 1234667889988 7777777
Q ss_pred CCCcEEEEeCCCCceEE--EeeccCCCCcEEEEEcc---CCCCeEEeeec
Q 022324 252 SLGSIAISGLSSDQRVA--TLRSTDCTGHIICLMYP---QFLHMLFFLCF 296 (299)
Q Consensus 252 ~dg~i~iwd~~~~~~~~--~~~~~~~~~~i~~~~~s---~~g~~l~s~s~ 296 (299)
..+.|.++|.. ++... .+..... ..++++|. |+++.|+.++.
T Consensus 231 ~~~~V~~~~~~-G~~~~~~~~~~~~~--~p~~~a~~g~~~d~~~LyVt~~ 277 (306)
T 2p4o_A 231 IYNSVVRIAPD-RSTTIIAQAEQGVI--GSTAVAFGQTEGDCTAIYVVTN 277 (306)
T ss_dssp TTCCEEEECTT-CCEEEEECGGGTCT--TEEEEEECCSTTTTTEEEEEEC
T ss_pred CCCeEEEECCC-CCEEEEeecccccC--CceEEEEecccCCCCEEEEECC
Confidence 78899999975 66533 2332223 68999998 89877776553
No 258
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.98 E-value=0.0042 Score=52.06 Aligned_cols=175 Identities=10% Similarity=0.006 Sum_probs=104.6
Q ss_pred eEEEe-cCCEEEEEeCCCcEEEEecCCceeEEEecCCCceeEEEEecCCCEEE-E-EcCCeEEEEecCCcee-eeeccCC
Q 022324 116 DQCRM-KRGLILTGVGDKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIV-G-LIGTRICIWRRNGLRS-VFPSREG 191 (299)
Q Consensus 116 ~~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~-~~d~~i~v~d~~~~~~-~~~~~~~ 191 (299)
.|... +..+|+.+. ...|+..++.................++|++.+..|+ + ...+.|+.+++.+... .+.....
T Consensus 80 ~C~~~~~~~~l~~~~-~~~I~~i~~~~~~~~~~~~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~ 158 (386)
T 3v65_B 80 SCKALGPEPVLLFAN-RIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGL 158 (386)
T ss_dssp CEEECSSCCEEEEEC-BSCEEEECTTSCCCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSC
T ss_pred eECCccccceeEeec-CccceeeccCCCcEEEEecCCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCC
Confidence 34444 333444443 3578888888766655555556677799998777666 4 3567899999886642 2211111
Q ss_pred ccceeeeeccCCCeE-EEecCCCcEEEEEcCCcceeeeccccCCceeEEEeCCC-CeEE-EEeCC-CcEEEEeCCCCceE
Q 022324 192 TFMKGLCMRYFDPEA-VVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLII-SGSSL-GSIAISGLSSDQRV 267 (299)
Q Consensus 192 ~~~~~~~~~~~~~~l-~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~-~~l~-~~~~d-g~i~iwd~~~~~~~ 267 (299)
.....+++.+.+..| ++-...+.|.+.++........+.........++++|. ..|. +-... +.|..+++.. ...
T Consensus 159 ~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG-~~~ 237 (386)
T 3v65_B 159 ESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDG-SGR 237 (386)
T ss_dssp SCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTS-CSC
T ss_pred CCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCC-CCc
Confidence 112245777666654 45555678888887643322223233356789999986 5444 44444 7888888864 333
Q ss_pred EEee-ccCCCCcEEEEEccCCCCeEEee
Q 022324 268 ATLR-STDCTGHIICLMYPQFLHMLFFL 294 (299)
Q Consensus 268 ~~~~-~~~~~~~i~~~~~s~~g~~l~s~ 294 (299)
..+. ..-. ..+.|+++|++..|..+
T Consensus 238 ~~~~~~~~~--~PnGlavd~~~~~lY~a 263 (386)
T 3v65_B 238 RIIADTHLF--WPNGLTIDYAGRRMYWV 263 (386)
T ss_dssp EEEECSSCS--CEEEEEEEGGGTEEEEE
T ss_pred EEEEECCCC--CeeeEEEeCCCCEEEEE
Confidence 3332 2222 67899999876666544
No 259
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=97.97 E-value=0.0026 Score=51.76 Aligned_cols=177 Identities=7% Similarity=-0.103 Sum_probs=105.2
Q ss_pred CeeEEEec--CCEEEEEeCCCcEEEEecCCceeEEEec---CC--CceeEEEEec-CCCEEEEEc---------------
Q 022324 114 GVDQCRMK--RGLILTGVGDKVMRLWSLEGYKCVEEYS---LP--NAASLVDFDF-DESKIVGLI--------------- 170 (299)
Q Consensus 114 ~i~~~~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~---~~--~~~~~~~~~~-~~~~l~~~~--------------- 170 (299)
....+.+. ++.|+.+...+.|..+|..+++...... .. .....+++.+ ++++.++..
T Consensus 81 ~p~gi~~~~~~g~l~v~d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~ 160 (322)
T 2fp8_A 81 RTYDISYNLQNNQLYIVDCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDT 160 (322)
T ss_dssp CEEEEEEETTTTEEEEEETTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHH
T ss_pred CCceEEEcCCCCcEEEEECCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcc
Confidence 46778884 4577777666668888877664322111 11 1234488999 888766443
Q ss_pred ---CCeEEEEecCCceeeeeccCCccceeeeeccCCCeEEEe-cCCCcEEEEEcCCcc--eeeeccccCCceeEEEeCCC
Q 022324 171 ---GTRICIWRRNGLRSVFPSREGTFMKGLCMRYFDPEAVVG-CEDGTARVFDMYSRK--CSQIIRMHCAPVTSLSLSED 244 (299)
Q Consensus 171 ---d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~-~~d~~i~iwd~~~~~--~~~~~~~~~~~i~~~~~~~~ 244 (299)
++.|..+|..+...............+++++++..++.+ ...+.|.+|++.... ....+....+ ...++++++
T Consensus 161 ~~~~g~v~~~d~~~~~~~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~ 239 (322)
T 2fp8_A 161 SDKTGRLIKYDPSTKETTLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNAD 239 (322)
T ss_dssp TCCCEEEEEEETTTTEEEEEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTT
T ss_pred cCCCceEEEEeCCCCEEEEeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECCC
Confidence 367888998765422111111112246888888865544 566889999987421 1112211223 788999988
Q ss_pred -CeEEEEeC----------CCcEEEEeCCCCceEEEeeccCC--CCcEEEEEccCCCCeEEe
Q 022324 245 -QLIISGSS----------LGSIAISGLSSDQRVATLRSTDC--TGHIICLMYPQFLHMLFF 293 (299)
Q Consensus 245 -~~l~~~~~----------dg~i~iwd~~~~~~~~~~~~~~~--~~~i~~~~~s~~g~~l~s 293 (299)
+++++... .+.|..+|. .++.+..+....+ ...+.++++ .+++++++
T Consensus 240 G~l~va~~~~~~~~~~~~~~~~v~~~d~-~G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~ 299 (322)
T 2fp8_A 240 GHFWVSSSEELDGNMHGRVDPKGIKFDE-FGNILEVIPLPPPFAGEHFEQIQE-HDGLLYIG 299 (322)
T ss_dssp SCEEEEEEEETTSSTTSCEEEEEEEECT-TSCEEEEEECCTTTTTSCCCEEEE-ETTEEEEE
T ss_pred CCEEEEecCcccccccCCCccEEEEECC-CCCEEEEEECCCCCccccceEEEE-eCCEEEEe
Confidence 76655544 467888987 4888877765432 115667766 35554444
No 260
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.96 E-value=0.0053 Score=50.68 Aligned_cols=179 Identities=10% Similarity=-0.009 Sum_probs=106.7
Q ss_pred cCeeEEEe-cCCEEEEEeCCCcEEEEecCCceeEEEecCCCceeEEEEecCCCEEE-E-EcCCeEEEEecCCcee-eeec
Q 022324 113 VGVDQCRM-KRGLILTGVGDKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIV-G-LIGTRICIWRRNGLRS-VFPS 188 (299)
Q Consensus 113 ~~i~~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~-~~d~~i~v~d~~~~~~-~~~~ 188 (299)
+..+|... ++.+|+.+. ...|+..++........+.....+..++|++.+..|+ + ...+.|+.+++.+... .+..
T Consensus 34 d~~~C~~~~~~~~ll~~~-~~~I~~i~~~g~~~~~~~~~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~ 112 (349)
T 3v64_C 34 DRRSCKALGPEPVLLFAN-RIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVS 112 (349)
T ss_dssp TSSCEEESSSCCEEEEEC-BSCEEEECTTSCCEEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC
T ss_pred CCCcccccccCceeEeec-ccceEEEeCCCCeeEEeecCCCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEe
Confidence 33445554 333444443 3457778887666555555556667799998777766 4 3467899999886542 2111
Q ss_pred cCCccceeeeeccCCCeE-EEecCCCcEEEEEcCCcceeeeccccCCceeEEEeCCC-C-eEEEEeCC-CcEEEEeCCCC
Q 022324 189 REGTFMKGLCMRYFDPEA-VVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-Q-LIISGSSL-GSIAISGLSSD 264 (299)
Q Consensus 189 ~~~~~~~~~~~~~~~~~l-~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~-~-~l~~~~~d-g~i~iwd~~~~ 264 (299)
........+++.+.+..| ++-...+.|.+.++........+.........++++|. . ++++-... +.|..+++. |
T Consensus 113 ~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~d-G 191 (349)
T 3v64_C 113 TGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMD-G 191 (349)
T ss_dssp SSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETT-S
T ss_pred CCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCC-C
Confidence 111122245777666664 45556778999998743322223233456789999986 4 44444444 788888885 4
Q ss_pred ceEEEeeccCCCCcEEEEEccCCCCeEEee
Q 022324 265 QRVATLRSTDCTGHIICLMYPQFLHMLFFL 294 (299)
Q Consensus 265 ~~~~~~~~~~~~~~i~~~~~s~~g~~l~s~ 294 (299)
.....+-.... ...+.++++|++..|..+
T Consensus 192 ~~~~~~~~~~~-~~PnGla~d~~~~~lY~a 220 (349)
T 3v64_C 192 SGRRIIADTHL-FWPNGLTIDYAGRRMYWV 220 (349)
T ss_dssp CSCEESCCSSC-SCEEEEEEETTTTEEEEE
T ss_pred CCcEEEEECCC-CCcceEEEeCCCCEEEEE
Confidence 33333322111 167899999877666554
No 261
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.96 E-value=0.0019 Score=50.04 Aligned_cols=149 Identities=11% Similarity=0.016 Sum_probs=91.8
Q ss_pred ceeEEEecCCCceeE--EEEecCCCEEEEEcC---CeEEEEecCCceeeeeccCCccceeeeeccCCCeEE-EecCCCcE
Q 022324 142 YKCVEEYSLPNAASL--VDFDFDESKIVGLIG---TRICIWRRNGLRSVFPSREGTFMKGLCMRYFDPEAV-VGCEDGTA 215 (299)
Q Consensus 142 ~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~d---~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-s~~~d~~i 215 (299)
.+.+.++.+...... +.|+. +.+..++.. ..|+.+|+.+++......-........+...+..++ ..-.++.+
T Consensus 9 ~~v~~~~phd~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~~~v 87 (243)
T 3mbr_X 9 YRVVKRYPHDTTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRNHEG 87 (243)
T ss_dssp EEEEEEEECCTTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEE
T ss_pred eEEEEEcCCCCccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeCCEE
Confidence 356667765544443 88876 333334443 499999999886443322222222234455566644 45568899
Q ss_pred EEEEcCCcceeeeccccCCceeEEEeCCCCeEEEEeCCCcEEEEeCCCCceEEEeeccCCC---CcEEEEEccCCCCeEE
Q 022324 216 RVFDMYSRKCSQIIRMHCAPVTSLSLSEDQLIISGSSLGSIAISGLSSDQRVATLRSTDCT---GHIICLMYPQFLHMLF 292 (299)
Q Consensus 216 ~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~---~~i~~~~~s~~g~~l~ 292 (299)
.+||..+.+.+.++.... .-..++.. ++.|+.+..++.|.++|..+.+.+.++...... ..++.+.+. +|+ |.
T Consensus 88 ~v~D~~tl~~~~ti~~~~-~Gwglt~d-g~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~-ly 163 (243)
T 3mbr_X 88 FVYDLATLTPRARFRYPG-EGWALTSD-DSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGE-LL 163 (243)
T ss_dssp EEEETTTTEEEEEEECSS-CCCEEEEC-SSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTE-EE
T ss_pred EEEECCcCcEEEEEeCCC-CceEEeeC-CCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCE-EE
Confidence 999999999999886433 33555543 244555556889999999999988888654321 145566654 554 44
Q ss_pred eee
Q 022324 293 FLC 295 (299)
Q Consensus 293 s~s 295 (299)
+..
T Consensus 164 anv 166 (243)
T 3mbr_X 164 ANV 166 (243)
T ss_dssp EEE
T ss_pred EEE
Confidence 443
No 262
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.94 E-value=0.0053 Score=49.89 Aligned_cols=161 Identities=14% Similarity=0.129 Sum_probs=97.7
Q ss_pred CcEEEEecCCceeEEEecCCCceeEEEEecCCCEEE-E-EcCCeEEEEecCC----ce-eeeeccCCccceeeeeccCCC
Q 022324 132 KVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIV-G-LIGTRICIWRRNG----LR-SVFPSREGTFMKGLCMRYFDP 204 (299)
Q Consensus 132 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~-~~d~~i~v~d~~~----~~-~~~~~~~~~~~~~~~~~~~~~ 204 (299)
..|+..|+.+.+....+..-..+..++|++.+..|+ + ..++.|+.+++.+ .. ..+..........+++.+.+.
T Consensus 10 ~~I~~i~~~~~~~~~~~~~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~ 89 (316)
T 1ijq_A 10 HEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHS 89 (316)
T ss_dssp SSEEEEETTSCCCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTT
T ss_pred CeEEEEECCCcceEehhcCCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCC
Confidence 568888988877666666556677799998777666 4 3467999999876 22 111111111122456766566
Q ss_pred eE-EEecCCCcEEEEEcCCcceeeeccccCCceeEEEeCCC-CeEEEEeC-C-CcEEEEeCCCCceEEEeeccCCCCcEE
Q 022324 205 EA-VVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGSS-L-GSIAISGLSSDQRVATLRSTDCTGHII 280 (299)
Q Consensus 205 ~l-~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~-~~l~~~~~-d-g~i~iwd~~~~~~~~~~~~~~~~~~i~ 280 (299)
.+ ++-...+.|.++|+........+.........++++|. ..|..+.. . +.|...++. |.....+..... ....
T Consensus 90 ~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~d-G~~~~~~~~~~~-~~P~ 167 (316)
T 1ijq_A 90 NIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN-GVDIYSLVTENI-QWPN 167 (316)
T ss_dssp EEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETT-SCCEEEEECSSC-SCEE
T ss_pred eEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCC-CCCeEEEEECCC-CCce
Confidence 55 44466788999998743332222223456789999985 54444443 3 688888875 444444422211 1688
Q ss_pred EEEccCCCCeEEee
Q 022324 281 CLMYPQFLHMLFFL 294 (299)
Q Consensus 281 ~~~~s~~g~~l~s~ 294 (299)
.++++|++..|..+
T Consensus 168 gla~d~~~~~lY~~ 181 (316)
T 1ijq_A 168 GITLDLLSGRLYWV 181 (316)
T ss_dssp EEEEETTTTEEEEE
T ss_pred EEEEeccCCEEEEE
Confidence 99999887766554
No 263
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=97.91 E-value=0.0029 Score=51.43 Aligned_cols=175 Identities=8% Similarity=0.034 Sum_probs=104.1
Q ss_pred eeEEEe-cCC-EEEEEeCCCcEEEEecCCceeEEEecC---------------------CCceeEEEEec-CCCEEEEEc
Q 022324 115 VDQCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEYSL---------------------PNAASLVDFDF-DESKIVGLI 170 (299)
Q Consensus 115 i~~~~~-~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~---------------------~~~~~~~~~~~-~~~~l~~~~ 170 (299)
-.++++ +++ +++++..++.|..|+..+++... +.. ...+..+++.+ +++++++..
T Consensus 21 p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d~ 99 (322)
T 2fp8_A 21 PNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVD-FAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVDC 99 (322)
T ss_dssp CCCEECCTTCSSEEEECTTSEEEEECCTTTCEEE-EEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEET
T ss_pred ceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEE-EecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEEC
Confidence 345667 455 58888899999999987654332 210 01345588997 666666767
Q ss_pred CCeEEEEecCCcee-eeec-cCC---ccceeeeecc-CCCeEEEecC-----------------CCcEEEEEcCCcceee
Q 022324 171 GTRICIWRRNGLRS-VFPS-REG---TFMKGLCMRY-FDPEAVVGCE-----------------DGTARVFDMYSRKCSQ 227 (299)
Q Consensus 171 d~~i~v~d~~~~~~-~~~~-~~~---~~~~~~~~~~-~~~~l~s~~~-----------------d~~i~iwd~~~~~~~~ 227 (299)
.+.+..+|..++.. .+.. ..+ ....-+++.+ ++...++-.. ++.|..+|..+++...
T Consensus 100 ~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~ 179 (322)
T 2fp8_A 100 YYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTL 179 (322)
T ss_dssp TTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEE
T ss_pred CCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEE
Confidence 77788898876531 2211 111 1122356667 6654444321 3678888887665432
Q ss_pred eccccCCceeEEEeCCC-CeEE-EEeCCCcEEEEeCCCCc--eEEEeeccCCCCcEEEEEccCCCCeEEee
Q 022324 228 IIRMHCAPVTSLSLSED-QLII-SGSSLGSIAISGLSSDQ--RVATLRSTDCTGHIICLMYPQFLHMLFFL 294 (299)
Q Consensus 228 ~~~~~~~~i~~~~~~~~-~~l~-~~~~dg~i~iwd~~~~~--~~~~~~~~~~~~~i~~~~~s~~g~~l~s~ 294 (299)
.. ........++++|+ +.|. +-+.++.|..|++.... ....+.. .. ....++++++|++.++.
T Consensus 180 ~~-~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~-~~--gP~gi~~d~~G~l~va~ 246 (322)
T 2fp8_A 180 LL-KELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVK-IP--NPGNIKRNADGHFWVSS 246 (322)
T ss_dssp EE-EEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEE-CS--SEEEEEECTTSCEEEEE
T ss_pred ec-cCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEe-CC--CCCCeEECCCCCEEEEe
Confidence 22 22234678999998 6554 44667899999987421 1222221 11 26788999999866654
No 264
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.85 E-value=0.0023 Score=56.81 Aligned_cols=145 Identities=10% Similarity=-0.041 Sum_probs=93.9
Q ss_pred EEEEeCCCcEEEEecCCceeEEEecCCC-----ceeE-EEEecCCCEEEEE------cCCeEEEEecCCceeeeeccCCc
Q 022324 125 ILTGVGDKVMRLWSLEGYKCVEEYSLPN-----AASL-VDFDFDESKIVGL------IGTRICIWRRNGLRSVFPSREGT 192 (299)
Q Consensus 125 l~s~~~dg~i~iwd~~~~~~~~~~~~~~-----~~~~-~~~~~~~~~l~~~------~d~~i~v~d~~~~~~~~~~~~~~ 192 (299)
++.++.|+.|..+|..+|+.+....... .... -.+ .++..++++ .++.|+.+|.++++.........
T Consensus 124 V~v~t~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v-~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~ 202 (599)
T 1w6s_A 124 ILKTQLDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYV-VKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATG 202 (599)
T ss_dssp EEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEE-ETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSS
T ss_pred EEEEcCCCEEEEEECCCCCEEEeecCCCCCccceeecCCEE-ECCEEEEEecccccCCCCeEEEEECCCCcEEEEEcCCC
Confidence 8999999999999999999988776443 2221 112 245445544 37899999999887544322111
Q ss_pred cc---------------------------------------eeeeeccCCCeEEEecCC----------------CcEEE
Q 022324 193 FM---------------------------------------KGLCMRYFDPEAVVGCED----------------GTARV 217 (299)
Q Consensus 193 ~~---------------------------------------~~~~~~~~~~~l~s~~~d----------------~~i~i 217 (299)
.. ...++.+....++.+..+ +.|..
T Consensus 203 ~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~A 282 (599)
T 1w6s_A 203 PDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFG 282 (599)
T ss_dssp CHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEE
T ss_pred CccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEE
Confidence 00 012233445556666554 37999
Q ss_pred EEcCCcceeeeccccC----------CceeEEEeC-C-C---CeEEEEeCCCcEEEEeCCCCceEEEee
Q 022324 218 FDMYSRKCSQIIRMHC----------APVTSLSLS-E-D---QLIISGSSLGSIAISGLSSDQRVATLR 271 (299)
Q Consensus 218 wd~~~~~~~~~~~~~~----------~~i~~~~~~-~-~---~~l~~~~~dg~i~iwd~~~~~~~~~~~ 271 (299)
+|.++++.+..++... .++. +... . + ..++.++.+|.++++|..+|+.+....
T Consensus 283 ld~~TG~~~W~~q~~~~d~wd~d~~~~p~l-~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~ 350 (599)
T 1w6s_A 283 RDADTGEAKFGYQKTPHDEWDYAGVNVMML-SEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANK 350 (599)
T ss_dssp EETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred EeCCCCceeeEeecCCCccccccCCCccEE-EeccccCCcEEEEEEEECCCcEEEEEECCCCCEeeccc
Confidence 9999999987776321 1221 2221 1 2 357778899999999999999887765
No 265
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.82 E-value=0.011 Score=49.78 Aligned_cols=168 Identities=12% Similarity=0.088 Sum_probs=102.0
Q ss_pred EEEEEeCCCcEEEEecCCceeEEEecCCCceeEEEEecCCCEEE-EE-cCCeEEEEecCCce-----eeeeccCCcccee
Q 022324 124 LILTGVGDKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIV-GL-IGTRICIWRRNGLR-----SVFPSREGTFMKG 196 (299)
Q Consensus 124 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~-~d~~i~v~d~~~~~-----~~~~~~~~~~~~~ 196 (299)
+|+.+. ...|+..++........+.....+..++|++.+..|+ +. ..+.|+.+++.+.. ..+..........
T Consensus 85 ~ll~~~-~~~I~~i~l~~~~~~~~~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~g 163 (400)
T 3p5b_L 85 YLFFTN-RHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDG 163 (400)
T ss_dssp EEEEEE-TTEEEEECTTSCSCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEE
T ss_pred eeEEec-cceeEEEccCCcceeEeccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCccc
Confidence 444444 3678888888766655566666777799998777776 43 46789999887521 1111111122234
Q ss_pred eeeccCCCeE-EEecCCCcEEEEEcCCcceeeeccccCCceeEEEeCCC-CeEEEEe-C-CCcEEEEeCCCCceEEEeec
Q 022324 197 LCMRYFDPEA-VVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGS-S-LGSIAISGLSSDQRVATLRS 272 (299)
Q Consensus 197 ~~~~~~~~~l-~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~-~~l~~~~-~-dg~i~iwd~~~~~~~~~~~~ 272 (299)
+++.+.+..| ++-...+.|.+.++........+.........|+++|. ..|.... . .+.|...++........+..
T Consensus 164 lavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~ 243 (400)
T 3p5b_L 164 LAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTE 243 (400)
T ss_dssp EEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECS
T ss_pred EEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEEC
Confidence 5777655554 44556778999888754433333333455789999986 5554444 2 47899999864332222222
Q ss_pred cCCCCcEEEEEccCCCCeEEee
Q 022324 273 TDCTGHIICLMYPQFLHMLFFL 294 (299)
Q Consensus 273 ~~~~~~i~~~~~s~~g~~l~s~ 294 (299)
.-. ....|+++|++..|..+
T Consensus 244 ~l~--~P~glavd~~~~~lY~a 263 (400)
T 3p5b_L 244 NIQ--WPNGITLDLLSGRLYWV 263 (400)
T ss_dssp SCS--CEEEEEEETTTTEEEEE
T ss_pred CCC--ceEEEEEEeCCCEEEEE
Confidence 223 68999999877766654
No 266
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.80 E-value=0.00088 Score=60.49 Aligned_cols=151 Identities=13% Similarity=0.093 Sum_probs=99.2
Q ss_pred cCCEEEEEeCCCcEEEEecCCceeEEEecCCCce----------e--EEEEecCCCEEEEEcCCeEEEEecCCceeeeec
Q 022324 121 KRGLILTGVGDKVMRLWSLEGYKCVEEYSLPNAA----------S--LVDFDFDESKIVGLIGTRICIWRRNGLRSVFPS 188 (299)
Q Consensus 121 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~----------~--~~~~~~~~~~l~~~~d~~i~v~d~~~~~~~~~~ 188 (299)
.++.++.++.++.|..+|..+|+.+.++...... + .+.+. ++..++++.|+.++.+|..+++.....
T Consensus 65 ~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~v~~~dg~l~alD~~tG~~~W~~ 143 (668)
T 1kv9_A 65 HDGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALW-GDKVYVGTLDGRLIALDAKTGKAIWSQ 143 (668)
T ss_dssp ETTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEE-BTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred ECCEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEEE-CCEEEEEcCCCEEEEEECCCCCEeeee
Confidence 4668888888999999999999999888654321 0 12221 333344888999999999988755433
Q ss_pred cCCcc--ceeeeecc--CCCeEEEecC------CCcEEEEEcCCcceeeeccccC-------------------------
Q 022324 189 REGTF--MKGLCMRY--FDPEAVVGCE------DGTARVFDMYSRKCSQIIRMHC------------------------- 233 (299)
Q Consensus 189 ~~~~~--~~~~~~~~--~~~~l~s~~~------d~~i~iwd~~~~~~~~~~~~~~------------------------- 233 (299)
..... .......| .+..++.+.. ++.|..+|..+|+.+..+....
T Consensus 144 ~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w 223 (668)
T 1kv9_A 144 QTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYW 223 (668)
T ss_dssp ECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHH
T ss_pred ccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCcccee
Confidence 22110 00000011 2344555543 5899999999999987764210
Q ss_pred ------CceeEEEeCCC-CeEEEEeCCC-------------------cEEEEeCCCCceEEEeec
Q 022324 234 ------APVTSLSLSED-QLIISGSSLG-------------------SIAISGLSSDQRVATLRS 272 (299)
Q Consensus 234 ------~~i~~~~~~~~-~~l~~~~~dg-------------------~i~iwd~~~~~~~~~~~~ 272 (299)
.....++++|+ .++..++.++ .|..+|..+|+.+..++.
T Consensus 224 ~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~ 288 (668)
T 1kv9_A 224 KLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQV 288 (668)
T ss_dssp HHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEES
T ss_pred eeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeec
Confidence 01124677777 7888887766 399999999999888765
No 267
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.78 E-value=0.0085 Score=55.11 Aligned_cols=180 Identities=12% Similarity=0.005 Sum_probs=112.5
Q ss_pred ccCeeEEEe-cCCEEEEEeCCCcEEEEecCCceeEEEec----------CCCceeEEEEecCCCEEEEEcCCeEEEEecC
Q 022324 112 SVGVDQCRM-KRGLILTGVGDKVMRLWSLEGYKCVEEYS----------LPNAASLVDFDFDESKIVGLIGTRICIWRRN 180 (299)
Q Consensus 112 ~~~i~~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~----------~~~~~~~~~~~~~~~~l~~~~d~~i~v~d~~ 180 (299)
...|.++.. .++.|-.|+.++-|..++..+........ ....+.++...+++.+.+|+.++.+..||..
T Consensus 312 ~~~v~~i~~D~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~ 391 (781)
T 3v9f_A 312 NASARYIFQDSFNNIWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGKLWIGTDGGGINVFENG 391 (781)
T ss_dssp SSCEEEEEECSSCCEEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSCEEEEEBSSCEEEEETT
T ss_pred CCeEEEEEEeCCCCEEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCCEEEEeCCCcEEEEECC
Confidence 346777777 45578888888888889887654332211 1123445777778887778888889999987
Q ss_pred Cceeeeecc--CCccceeeeeccC-CCeEEEecCCCcEEEEEcCCcceeeecc--ccCCceeEEEeCCCCeEEEEeCCCc
Q 022324 181 GLRSVFPSR--EGTFMKGLCMRYF-DPEAVVGCEDGTARVFDMYSRKCSQIIR--MHCAPVTSLSLSEDQLIISGSSLGS 255 (299)
Q Consensus 181 ~~~~~~~~~--~~~~~~~~~~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~--~~~~~i~~~~~~~~~~l~~~~~dg~ 255 (299)
+........ ......+.++..+ ...|..|..++-+..+|..+++...... .....|.++...++..|..|+. +-
T Consensus 392 ~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lwigt~-~G 470 (781)
T 3v9f_A 392 KRVAIYNKENRELLSNSVLCSLKDSEGNLWFGTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIWIGTH-AG 470 (781)
T ss_dssp EEEEECC-----CCCSBEEEEEECTTSCEEEEETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEEEEEET-TE
T ss_pred CCeEEEccCCCCCCCcceEEEEECCCCCEEEEeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCEEEEEC-Cc
Confidence 654221111 1111224444444 3347778777779999988765433221 2345788998887755666666 55
Q ss_pred EEEEeCCCCceEEEeecc-----CCCCcEEEEEccCCCCeEEee
Q 022324 256 IAISGLSSDQRVATLRST-----DCTGHIICLMYPQFLHMLFFL 294 (299)
Q Consensus 256 i~iwd~~~~~~~~~~~~~-----~~~~~i~~~~~s~~g~~l~s~ 294 (299)
|..+|..+++........ .. .|.++...++|.+.++.
T Consensus 471 l~~~~~~~~~~~~~~~~~~~~~~~~--~i~~i~~d~~g~lWigt 512 (781)
T 3v9f_A 471 VFVIDLASKKVIHHYDTSNSQLLEN--FVRSIAQDSEGRFWIGT 512 (781)
T ss_dssp EEEEESSSSSCCEEECTTTSSCSCS--CEEEEEECTTCCEEEEE
T ss_pred eEEEeCCCCeEEecccCcccccccc--eeEEEEEcCCCCEEEEE
Confidence 999998876643332222 22 79999999998876653
No 268
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.78 E-value=0.0081 Score=55.24 Aligned_cols=180 Identities=12% Similarity=0.031 Sum_probs=109.8
Q ss_pred cCeeEEEe-cCCEEEEEeCCCcEEEEecCCceeEEEe---c-CCCceeEEEEecCCCEEEEEcCCeEEEEecCCceeeee
Q 022324 113 VGVDQCRM-KRGLILTGVGDKVMRLWSLEGYKCVEEY---S-LPNAASLVDFDFDESKIVGLIGTRICIWRRNGLRSVFP 187 (299)
Q Consensus 113 ~~i~~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~---~-~~~~~~~~~~~~~~~~l~~~~d~~i~v~d~~~~~~~~~ 187 (299)
..|.++.. +++.|..|+.++-|..+|..+++..... . ....+.++...+++.+.+++.++.+..+|..+.+....
T Consensus 363 ~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~ 442 (781)
T 3v9f_A 363 KVVSSVCDDGQGKLWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDSEGNLWFGTYLGNISYYNTRLKKFQII 442 (781)
T ss_dssp SCEEEEEECTTSCEEEEEBSSCEEEEETTEEEEECC-----CCCSBEEEEEECTTSCEEEEETTEEEEEECSSSCEEEEC
T ss_pred cceEEEEEcCCCCEEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECCCCCEEEEeccCCEEEEcCCCCcEEEe
Confidence 45777777 4567788887777888998765433211 1 12334457777788877788888899999876643221
Q ss_pred cc-CCccceeeeeccCC-CeEEEecCCCcEEEEEcCCcceeeecccc-----CCceeEEEeCCCCeEEEEeCCCcEEEEe
Q 022324 188 SR-EGTFMKGLCMRYFD-PEAVVGCEDGTARVFDMYSRKCSQIIRMH-----CAPVTSLSLSEDQLIISGSSLGSIAISG 260 (299)
Q Consensus 188 ~~-~~~~~~~~~~~~~~-~~l~s~~~d~~i~iwd~~~~~~~~~~~~~-----~~~i~~~~~~~~~~l~~~~~dg~i~iwd 260 (299)
.. ......+.++..+. ..+..|.. +-+..+|..+++........ ...|.++...++..|..|+.++-|..||
T Consensus 443 ~~~~~~~~~v~~i~~d~~g~lwigt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~Gl~~~~ 521 (781)
T 3v9f_A 443 ELEKNELLDVRVFYEDKNKKIWIGTH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGGVGIYT 521 (781)
T ss_dssp CSTTTCCCCEEEEEECTTSEEEEEET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESSSCEEEEC
T ss_pred ccCCCCCCeEEEEEECCCCCEEEEEC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEcCCCEEEEe
Confidence 11 11112233444443 34666666 56889998876543322111 3578899888774455666644588899
Q ss_pred CCCCceEEEeeccCC--CCcEEEEEccCCCCeEEee
Q 022324 261 LSSDQRVATLRSTDC--TGHIICLMYPQFLHMLFFL 294 (299)
Q Consensus 261 ~~~~~~~~~~~~~~~--~~~i~~~~~s~~g~~l~s~ 294 (299)
..+++ +..+..... ...|.++..+++|.+.++.
T Consensus 522 ~~~~~-~~~~~~~~~l~~~~i~~i~~d~~g~lWi~T 556 (781)
T 3v9f_A 522 PDMQL-VRKFNQYEGFCSNTINQIYRSSKGQMWLAT 556 (781)
T ss_dssp TTCCE-EEEECTTTTCSCSCEEEEEECTTSCEEEEE
T ss_pred CCCCe-EEEccCCCCCCCCeeEEEEECCCCCEEEEE
Confidence 87654 333432111 1278999999998876653
No 269
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.65 E-value=0.03 Score=51.40 Aligned_cols=161 Identities=13% Similarity=0.124 Sum_probs=98.5
Q ss_pred CCCcEEEEecCCceeEEEecCCCceeEEEEecCCCEEE-E-EcCCeEEEEecCCc------eeeeeccCCccceeeeecc
Q 022324 130 GDKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIV-G-LIGTRICIWRRNGL------RSVFPSREGTFMKGLCMRY 201 (299)
Q Consensus 130 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~-~~d~~i~v~d~~~~------~~~~~~~~~~~~~~~~~~~ 201 (299)
....|+..++........+........+++++.+..|+ + ...+.|+.+++.+. ..++... ......+++.+
T Consensus 402 n~~~Ir~i~l~~~~~~~l~~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~-l~~P~GLAvD~ 480 (791)
T 3m0c_C 402 NRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRD-IQAPDGLAVDW 480 (791)
T ss_dssp CBSSEEEECTTSCCCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSS-CSCCCEEEEET
T ss_pred cccceeEeeccCCcceeeecCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecC-CCCcceeeeee
Confidence 34567777877666555555666677799998766665 4 34578888888753 1222211 12222467777
Q ss_pred CCCeEE-EecCCCcEEEEEcCCcceeeeccccCCceeEEEeCCC-CeEEEEe-C-CCcEEEEeCCCCceEEEeec-cCCC
Q 022324 202 FDPEAV-VGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGS-S-LGSIAISGLSSDQRVATLRS-TDCT 276 (299)
Q Consensus 202 ~~~~l~-s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~-~~l~~~~-~-dg~i~iwd~~~~~~~~~~~~-~~~~ 276 (299)
.+..|+ +-...+.|.+.++........+.........|+++|. ..|..+. . .+.|...++. |.....+.. .-.
T Consensus 481 ~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~d-G~~~~~lv~~~l~- 558 (791)
T 3m0c_C 481 IHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN-GVDIYSLVTENIQ- 558 (791)
T ss_dssp TTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETT-SCCEEEEECSSCS-
T ss_pred cCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecC-CCceEEEEeCCCC-
Confidence 776644 5556788999998744332233233455889999987 5555544 3 3678889986 443333332 223
Q ss_pred CcEEEEEccCCCCeEEee
Q 022324 277 GHIICLMYPQFLHMLFFL 294 (299)
Q Consensus 277 ~~i~~~~~s~~g~~l~s~ 294 (299)
....|++++.+..|+.+
T Consensus 559 -~P~GLavD~~~~~LYwa 575 (791)
T 3m0c_C 559 -WPNGITLDLLSGRLYWV 575 (791)
T ss_dssp -CEEEEEEETTTTEEEEE
T ss_pred -CceEEEEecCCCeEEEE
Confidence 78899999876666554
No 270
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.60 E-value=0.0038 Score=53.11 Aligned_cols=138 Identities=5% Similarity=0.034 Sum_probs=82.2
Q ss_pred eeEEEEec-CCCEEE-EEcCCeEEEEecCCceeeeeccCCccceeeeeccCCCeEEEecC-CC----cEEEEEcCCccee
Q 022324 154 ASLVDFDF-DESKIV-GLIGTRICIWRRNGLRSVFPSREGTFMKGLCMRYFDPEAVVGCE-DG----TARVFDMYSRKCS 226 (299)
Q Consensus 154 ~~~~~~~~-~~~~l~-~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~-d~----~i~iwd~~~~~~~ 226 (299)
+..++++| ++..|+ +...+.|+.+|+.+...............+++.+++..|+.+.. ++ .+..++. .+...
T Consensus 139 P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~-~g~~~ 217 (430)
T 3tc9_A 139 AVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTR-ESGFK 217 (430)
T ss_dssp CCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG-GGTSC
T ss_pred CCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC-CCcee
Confidence 34588997 344555 55558899999987653222222333335688888886555543 22 2333443 33322
Q ss_pred --eeccccCCceeEEEeCC-C-CeEEEEeCCCcEEEEeCCCCceEEEeeccCCCCcEEEEEccCCCCeEEee
Q 022324 227 --QIIRMHCAPVTSLSLSE-D-QLIISGSSLGSIAISGLSSDQRVATLRSTDCTGHIICLMYPQFLHMLFFL 294 (299)
Q Consensus 227 --~~~~~~~~~i~~~~~~~-~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~s~ 294 (299)
..+. .......++++| + .++++-..++.|..++...+............ ....++|+|+|++|+.+
T Consensus 218 ~~~~l~-~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~-~P~gia~~pdG~~lyv~ 287 (430)
T 3tc9_A 218 VITELT-KGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSG-WEFHIQFHPSGNYAYIV 287 (430)
T ss_dssp SEEEEE-ECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSS-CCEEEEECTTSSEEEEE
T ss_pred eeeeec-cCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCC-cceeEEEcCCCCEEEEE
Confidence 2222 233467788999 5 55666667889999999766542222222211 57899999999966554
No 271
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=97.59 E-value=0.019 Score=46.19 Aligned_cols=175 Identities=9% Similarity=0.007 Sum_probs=96.7
Q ss_pred cCeeEEEe-cCC-EEEEEeCCCcEEEEecCCceeEEEecCCCceeEEEEecCCCEEEEEc--CC-eEEEEecCCceee--
Q 022324 113 VGVDQCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIVGLI--GT-RICIWRRNGLRSV-- 185 (299)
Q Consensus 113 ~~i~~~~~-~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--d~-~i~v~d~~~~~~~-- 185 (299)
.....+++ +++ ++++-..++.|..||... +....+........++++++++++++.. ++ .|..+|..++...
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g-~~~~~~~~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~~ 110 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDG-NQQIHATVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVETL 110 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTC-CEEEEEECSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEEE
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCC-ceEEEEeCCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEEE
Confidence 34567788 555 555555788999999775 4444444444555699999999766443 22 5777776665421
Q ss_pred eeccCCccceeeeeccCCCeEEEecCCCcEEEEEcCCcce-eee---------ccccCCceeEEEeCCC-C-eEEEEeCC
Q 022324 186 FPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKC-SQI---------IRMHCAPVTSLSLSED-Q-LIISGSSL 253 (299)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~-~~~---------~~~~~~~i~~~~~~~~-~-~l~~~~~d 253 (299)
............+....+..+++-..++.|..+|...++. +.. ....-...+.+ +++ + ++++-...
T Consensus 111 ~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~~ 188 (306)
T 2p4o_A 111 LTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTEK 188 (306)
T ss_dssp EECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETTT
T ss_pred EeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeCCC
Confidence 1111122222223323222244444688899999875421 110 00111234555 566 4 45555668
Q ss_pred CcEEEEeCCC-Cce--EEEeeccCCCCcEEEEEccCCCCeEEe
Q 022324 254 GSIAISGLSS-DQR--VATLRSTDCTGHIICLMYPQFLHMLFF 293 (299)
Q Consensus 254 g~i~iwd~~~-~~~--~~~~~~~~~~~~i~~~~~s~~g~~l~s 293 (299)
+.|..+|+.. ++. ...+... . ....++++++|+++++
T Consensus 189 ~~I~~~~~~~~g~~~~~~~~~~~-~--~P~gi~vd~dG~l~va 228 (306)
T 2p4o_A 189 MLLLRIPVDSTDKPGEPEIFVEQ-T--NIDDFAFDVEGNLYGA 228 (306)
T ss_dssp TEEEEEEBCTTSCBCCCEEEEES-C--CCSSEEEBTTCCEEEE
T ss_pred CEEEEEEeCCCCCCCccEEEecc-C--CCCCeEECCCCCEEEE
Confidence 8999999864 321 1122111 1 4566788888876554
No 272
>1fs1_A SKP2 F-BOX, cyclin A/CDK2-associated P19; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.158.1.1 PDB: 1ldk_E
Probab=97.56 E-value=5.2e-05 Score=43.74 Aligned_cols=47 Identities=32% Similarity=0.566 Sum_probs=38.9
Q ss_pred CcchhccCcHHHHHHHhhccCccchhhHHHhhhhHHHHhhhhhHHHH
Q 022324 20 PRATIESLNGDIICMIFSSLGFFDLVRCSAVCKSWNAIINRCKLLQL 66 (299)
Q Consensus 20 ~~~~~~~~~~~~~~~i~~~~~h~~~v~~~~~~~~~~~l~~~~~~w~~ 66 (299)
....+..+|.|+..+|+++++..+.+++..+|+.|+.++.+..+|+.
T Consensus 5 ~~~~~~~LP~eil~~I~~~L~~~dl~~~~~Vck~w~~~~~~~~lW~~ 51 (53)
T 1fs1_A 5 PGVSWDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLWQT 51 (53)
T ss_dssp ----CCSSCHHHHHHHHTTSCGGGHHHHHTTCHHHHHHHTCGGGC--
T ss_pred CCCCHHHCCHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHHHHh
Confidence 34567889999999999999999999999999999999987778864
No 273
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.53 E-value=0.009 Score=54.73 Aligned_cols=148 Identities=9% Similarity=0.096 Sum_probs=86.5
Q ss_pred CeeEEEec--CC-EEE-EEeCCC----cEEEEecCCc-eeEE-EecCCCceeEEEEecCCCEEE-EEcC-----CeEEEE
Q 022324 114 GVDQCRMK--RG-LIL-TGVGDK----VMRLWSLEGY-KCVE-EYSLPNAASLVDFDFDESKIV-GLIG-----TRICIW 177 (299)
Q Consensus 114 ~i~~~~~~--~~-~l~-s~~~dg----~i~iwd~~~~-~~~~-~~~~~~~~~~~~~~~~~~~l~-~~~d-----~~i~v~ 177 (299)
.+....|+ ++ +|+ +.+.+| +|+++|+.++ +.+. .+. .....+.|+||++.|+ ...+ ..|+.+
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~--~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~ 252 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS--GTNGEIVWGPDHTSLFYVTKDETLRENKVWRH 252 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE--EECSCCEECSSTTEEEEEEECTTCCEEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc--CceeeEEEecCCCEEEEEEECCCCCCCEEEEE
Confidence 45566665 55 454 333333 5999999998 6321 111 1112388999999888 5554 368888
Q ss_pred ecCCce----eeeeccCCccceeeeeccCCCeEEEec---CCCcEEEEEcCCcc-ee--eec-cccCCceeEEEeCCC-C
Q 022324 178 RRNGLR----SVFPSREGTFMKGLCMRYFDPEAVVGC---EDGTARVFDMYSRK-CS--QII-RMHCAPVTSLSLSED-Q 245 (299)
Q Consensus 178 d~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~s~~---~d~~i~iwd~~~~~-~~--~~~-~~~~~~i~~~~~~~~-~ 245 (299)
++.++. .++............+++++.+|+... ....|.++|+.++. .. ..+ ........++.|+.+ .
T Consensus 253 ~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~g~~ 332 (751)
T 2xe4_A 253 VMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHGTSH 332 (751)
T ss_dssp ETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEETTTE
T ss_pred ECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeeeCCE
Confidence 987753 233322222223457999999866443 34468888988752 12 233 233455666766656 4
Q ss_pred eEEEEeCC----CcEEEEeCCC
Q 022324 246 LIISGSSL----GSIAISGLSS 263 (299)
Q Consensus 246 ~l~~~~~d----g~i~iwd~~~ 263 (299)
+++....+ ..|..+|+.+
T Consensus 333 l~~~t~~~~a~~~~L~~~d~~~ 354 (751)
T 2xe4_A 333 LVILTNEGGAVNHKLLIAPRGQ 354 (751)
T ss_dssp EEEEECTTTCTTCEEEEEETTS
T ss_pred EEEEeCCCCCCCcEEEEEcCCC
Confidence 45554443 3577777764
No 274
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.52 E-value=0.0015 Score=57.95 Aligned_cols=129 Identities=11% Similarity=0.031 Sum_probs=82.0
Q ss_pred EEEEEeCCCcEEEEecCCceeEEEecCCCce----------------------------------------------eEE
Q 022324 124 LILTGVGDKVMRLWSLEGYKCVEEYSLPNAA----------------------------------------------SLV 157 (299)
Q Consensus 124 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~----------------------------------------------~~~ 157 (299)
.++.++.+|.++++|..+|+.+..+.....+ ..+
T Consensus 338 ~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~ 417 (582)
T 1flg_A 338 ATAHADRNGFFYVVDRSNGKLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPM 417 (582)
T ss_dssp EEEEECTTSEEEEEETTTCCEEEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCC
T ss_pred EEEEECCCceEEEEECCCCCEecccccccCccccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCc
Confidence 6788999999999999999988766543200 013
Q ss_pred EEecCCCEEE-EE---------------------------------cCCeEEEEecCCceeeeeccCCccceeeeeccCC
Q 022324 158 DFDFDESKIV-GL---------------------------------IGTRICIWRRNGLRSVFPSREGTFMKGLCMRYFD 203 (299)
Q Consensus 158 ~~~~~~~~l~-~~---------------------------------~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (299)
+++|+..+++ .. .+|.|..||+.+++.............-.+...+
T Consensus 418 a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tag 497 (582)
T 1flg_A 418 AYSQDTGLFYVPANHWKEDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHLPLWAGVLATAG 497 (582)
T ss_dssp EECTTTCCEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESSCCCSCCEEETT
T ss_pred eECCCCCEEEEechhcceeeecccccccCCCceeccceeecCCCCCCcceEEEEECCCCCEEEEecCCCCCcccceEeCC
Confidence 5555554444 22 2578999999988755443322111111223346
Q ss_pred CeEEEecCCCcEEEEEcCCcceeeeccccCCce-eEEEeCCC--CeEEEEeC
Q 022324 204 PEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPV-TSLSLSED--QLIISGSS 252 (299)
Q Consensus 204 ~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i-~~~~~~~~--~~l~~~~~ 252 (299)
..++.++.|+.++.||.++++.+.+++...... .-+.+..+ +++++.+.
T Consensus 498 glvf~g~~dg~l~A~D~~tG~~lW~~~~~~g~~a~P~~y~~~G~qYv~~~~G 549 (582)
T 1flg_A 498 NLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDGEQYLGVTVG 549 (582)
T ss_dssp TEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEEEC
T ss_pred CEEEEECCCCcEEEEECCCCCEEEEecCCCCcccCceEEEECCEEEEEEEcc
Confidence 667889999999999999999998887433221 12444444 56665544
No 275
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.48 E-value=0.029 Score=45.57 Aligned_cols=160 Identities=14% Similarity=0.062 Sum_probs=94.5
Q ss_pred CCcEEEEecCCce--eEEEecCCCceeEEEEecCCCEEE-E-EcCCeEEEEecCCce---eeeeccCCccceeeeeccCC
Q 022324 131 DKVMRLWSLEGYK--CVEEYSLPNAASLVDFDFDESKIV-G-LIGTRICIWRRNGLR---SVFPSREGTFMKGLCMRYFD 203 (299)
Q Consensus 131 dg~i~iwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~-~-~~d~~i~v~d~~~~~---~~~~~~~~~~~~~~~~~~~~ 203 (299)
...|+..++.... ....+......+.++|++.+..|+ + ...+.|+.+++.+.. ........ ....+++.+.+
T Consensus 12 ~~~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~-~p~glavd~~~ 90 (318)
T 3sov_A 12 RRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLL-SPDGLACDWLG 90 (318)
T ss_dssp EEEEEEEETTCTTSCCEEEEEEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCS-CCCEEEEETTT
T ss_pred cCeEEEEECCCCceEEEEEecCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCC-CccEEEEEcCC
Confidence 4678888887653 222222223456689998766666 4 346789999987653 11211111 12245677655
Q ss_pred CeE-EEecCCCcEEEEEcCCcceeeeccccCCceeEEEeCCC-CeEEEEe--CCCcEEEEeCCCCceEEEee-ccCCCCc
Q 022324 204 PEA-VVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGS--SLGSIAISGLSSDQRVATLR-STDCTGH 278 (299)
Q Consensus 204 ~~l-~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~-~~l~~~~--~dg~i~iwd~~~~~~~~~~~-~~~~~~~ 278 (299)
..| ++-...+.|.++++........+.........++++|. ..|..+. ..+.|...++. |.....+- ..-. .
T Consensus 91 g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~d-G~~~~~~~~~~l~--~ 167 (318)
T 3sov_A 91 EKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMD-GSSRFIIINSEIY--W 167 (318)
T ss_dssp TEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETT-SCSCEEEECSSCS--C
T ss_pred CeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcC-CCCeEEEEECCCC--C
Confidence 554 45556778999998743322222233456789999986 5555554 35788888875 43333332 2222 6
Q ss_pred EEEEEccCCCCeEEee
Q 022324 279 IICLMYPQFLHMLFFL 294 (299)
Q Consensus 279 i~~~~~s~~g~~l~s~ 294 (299)
.+.++++|++..|..+
T Consensus 168 Pnglavd~~~~~lY~a 183 (318)
T 3sov_A 168 PNGLTLDYEEQKLYWA 183 (318)
T ss_dssp EEEEEEETTTTEEEEE
T ss_pred ccEEEEeccCCEEEEE
Confidence 7899999976666544
No 276
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.41 E-value=0.043 Score=45.88 Aligned_cols=169 Identities=12% Similarity=0.048 Sum_probs=97.0
Q ss_pred CeeEEEec--CC-EEEEEeCCCcEEEEecCCceeEEEecCC-CceeEEEEecCCCEEE-E-EcCCeEEEEecCCcee-ee
Q 022324 114 GVDQCRMK--RG-LILTGVGDKVMRLWSLEGYKCVEEYSLP-NAASLVDFDFDESKIV-G-LIGTRICIWRRNGLRS-VF 186 (299)
Q Consensus 114 ~i~~~~~~--~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~-~-~~d~~i~v~d~~~~~~-~~ 186 (299)
....++|. ++ ++++-...+.|..++.........+... .....+++++.+..|+ + ...+.|.+.++.+... .+
T Consensus 117 ~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l 196 (386)
T 3v65_B 117 NAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVL 196 (386)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEE
T ss_pred ccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEe
Confidence 45567773 34 4445556788888888765543333322 2334488888666655 3 4467888888876532 22
Q ss_pred eccCCccceeeeeccCCCeEEEec-CC-CcEEEEEcCCcceeeeccccCCceeEEEeCCC-C-eEEEEeCCCcEEEEeCC
Q 022324 187 PSREGTFMKGLCMRYFDPEAVVGC-ED-GTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-Q-LIISGSSLGSIAISGLS 262 (299)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~l~s~~-~d-~~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~-~-~l~~~~~dg~i~iwd~~ 262 (299)
..........+++.+.+..++... .. +.|..+++............-...+.|+++|+ . ++++-+..+.|..+|+.
T Consensus 197 ~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~d 276 (386)
T 3v65_B 197 LWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLD 276 (386)
T ss_dssp ECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTT
T ss_pred ecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCC
Confidence 211112233467777776654443 34 67888887633222222223345789999976 4 45555567789999986
Q ss_pred CCceEEEeeccCCCCcEEEEEc
Q 022324 263 SDQRVATLRSTDCTGHIICLMY 284 (299)
Q Consensus 263 ~~~~~~~~~~~~~~~~i~~~~~ 284 (299)
.......+..... ...++++
T Consensus 277 G~~~~~~~~~~~~--~P~giav 296 (386)
T 3v65_B 277 GSHRKAVISQGLP--HPFAITV 296 (386)
T ss_dssp SCSCEEEECSSCS--SEEEEEE
T ss_pred CCeeEEEEECCCC--CceEEEE
Confidence 4332222222222 5677777
No 277
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.36 E-value=0.0032 Score=57.70 Aligned_cols=136 Identities=9% Similarity=-0.010 Sum_probs=79.9
Q ss_pred EEEEe-cCCCEEE-EEc-CC----eEEEEecCCc-eeeeeccCCccceeeeeccCCCeEEEecCC-----CcEEEEEcCC
Q 022324 156 LVDFD-FDESKIV-GLI-GT----RICIWRRNGL-RSVFPSREGTFMKGLCMRYFDPEAVVGCED-----GTARVFDMYS 222 (299)
Q Consensus 156 ~~~~~-~~~~~l~-~~~-d~----~i~v~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d-----~~i~iwd~~~ 222 (299)
...|+ ||+++|+ +.. +| .|+++|+.++ +........ .....+|+++++.|+....+ ..|..+++.+
T Consensus 178 ~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~~-~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt 256 (751)
T 2xe4_A 178 EVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVSG-TNGEIVWGPDHTSLFYVTKDETLRENKVWRHVMGK 256 (751)
T ss_dssp EEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEEE-ECSCCEECSSTTEEEEEEECTTCCEEEEEEEETTS
T ss_pred eeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCccccC-ceeeEEEecCCCEEEEEEECCCCCCCEEEEEECCC
Confidence 48999 9999988 433 33 5999999887 522111111 12245899999886655544 3588888877
Q ss_pred cce--eeecc-ccCCceeEEEeCCC-CeEEEEeC---CCcEEEEeCCCCc-eE--EEeeccCCCCcEEEEEccCCCCeEE
Q 022324 223 RKC--SQIIR-MHCAPVTSLSLSED-QLIISGSS---LGSIAISGLSSDQ-RV--ATLRSTDCTGHIICLMYPQFLHMLF 292 (299)
Q Consensus 223 ~~~--~~~~~-~~~~~i~~~~~~~~-~~l~~~~~---dg~i~iwd~~~~~-~~--~~~~~~~~~~~i~~~~~s~~g~~l~ 292 (299)
+.. ...+. ........+.|+|| ++|+..+. ...|.++|+.+++ .. ..+...... ...++.|+.++.+++
T Consensus 257 ~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~-~~~s~~~~~g~~l~~ 335 (751)
T 2xe4_A 257 LQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKG-VRYDVQMHGTSHLVI 335 (751)
T ss_dssp CGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTT-CCEEEEEETTTEEEE
T ss_pred CchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCC-ceEEEeeeeCCEEEE
Confidence 542 22222 22344678899999 77665542 3468889987752 22 333322221 556665544444333
Q ss_pred e
Q 022324 293 F 293 (299)
Q Consensus 293 s 293 (299)
.
T Consensus 336 ~ 336 (751)
T 2xe4_A 336 L 336 (751)
T ss_dssp E
T ss_pred E
Confidence 3
No 278
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.35 E-value=0.0063 Score=54.81 Aligned_cols=177 Identities=8% Similarity=-0.063 Sum_probs=95.5
Q ss_pred EEe-cCC-EEEEEe-CCCcEEEEecCCceeEEEecCCCc--eeEEEEecCCCEEE-EE-cC-----CeEEEEecCCceee
Q 022324 118 CRM-KRG-LILTGV-GDKVMRLWSLEGYKCVEEYSLPNA--ASLVDFDFDESKIV-GL-IG-----TRICIWRRNGLRSV 185 (299)
Q Consensus 118 ~~~-~~~-~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~-~~-~d-----~~i~v~d~~~~~~~ 185 (299)
+.+ .++ +++.|+ .+..+.+||..+.+....-..+.. ...+++.+++++++ |+ .+ ..+.+||..+..-.
T Consensus 248 ~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~ 327 (656)
T 1k3i_A 248 ISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWT 327 (656)
T ss_dssp EEECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEE
T ss_pred ccCCCCCCEEEeCCCCCCceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcce
Confidence 344 555 667776 456899999988765543222222 22355667888877 55 34 47999999876522
Q ss_pred ee-c-----cCCccceeeeeccCCCeEEEecCCC---------cEEEEEcCCcceeeeccccC---------CceeEEEe
Q 022324 186 FP-S-----REGTFMKGLCMRYFDPEAVVGCEDG---------TARVFDMYSRKCSQIIRMHC---------APVTSLSL 241 (299)
Q Consensus 186 ~~-~-----~~~~~~~~~~~~~~~~~l~s~~~d~---------~i~iwd~~~~~~~~~~~~~~---------~~i~~~~~ 241 (299)
.. . ...... ...+..++..++.|+.++ .+..||..+..-........ ..-.++.+
T Consensus 328 ~~~~~~~~p~~~~~~-~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~ 406 (656)
T 1k3i_A 328 SLPNAKVNPMLTADK-QGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMY 406 (656)
T ss_dssp EETTSCSGGGCCCCT-TGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEE
T ss_pred eCCCccccccccccc-cceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEec
Confidence 11 0 000000 012223333345554443 46788887654332221111 11233443
Q ss_pred CC-C-CeEEEEeCCC-----------cEEEEeCCCCceEEEe--eccCCCCcEEEEEccCCCCeEEeeec
Q 022324 242 SE-D-QLIISGSSLG-----------SIAISGLSSDQRVATL--RSTDCTGHIICLMYPQFLHMLFFLCF 296 (299)
Q Consensus 242 ~~-~-~~l~~~~~dg-----------~i~iwd~~~~~~~~~~--~~~~~~~~i~~~~~s~~g~~l~s~s~ 296 (299)
.. + ++++.|+.++ .|.+||..+.+-.... ..+... .-.+++..|+|++++.|+.
T Consensus 407 ~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R-~~~~~~~l~~g~i~v~GG~ 475 (656)
T 1k3i_A 407 DAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFAR-TFHTSVVLPDGSTFITGGQ 475 (656)
T ss_dssp ETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCC-BSCEEEECTTSCEEEECCB
T ss_pred cCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCc-ccCCeEECCCCCEEEECCc
Confidence 32 4 7788887543 6788888776644332 112221 2244566789999999874
No 279
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.24 E-value=0.039 Score=46.87 Aligned_cols=145 Identities=9% Similarity=-0.011 Sum_probs=88.6
Q ss_pred eEEEec--CC-EEEEEeCCCcEEEEecCCceeEEEecCCCceeEEEEecCCCEEE-EEcC-----CeEEEEecCCcee--
Q 022324 116 DQCRMK--RG-LILTGVGDKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIV-GLIG-----TRICIWRRNGLRS-- 184 (299)
Q Consensus 116 ~~~~~~--~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~d-----~~i~v~d~~~~~~-- 184 (299)
..+++. ++ .|+.+...+.|+.+|..+++.............++++++++.|+ +... ..+.+++......
T Consensus 140 ~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~~~~~ 219 (430)
T 3tc9_A 140 VWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRESGFKVI 219 (430)
T ss_dssp CEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGTSCSE
T ss_pred CEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCceeee
Confidence 456664 23 66666555889999988777655555444566699999999665 4431 1344455433211
Q ss_pred -eeeccCCccceeeeeccC-CCeEEEecCCCcEEEEEcCCcceeeecc-ccCCceeEEEeCCC-C-eEEEEeCCCcEEEE
Q 022324 185 -VFPSREGTFMKGLCMRYF-DPEAVVGCEDGTARVFDMYSRKCSQIIR-MHCAPVTSLSLSED-Q-LIISGSSLGSIAIS 259 (299)
Q Consensus 185 -~~~~~~~~~~~~~~~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~-~~~~~i~~~~~~~~-~-~l~~~~~dg~i~iw 259 (299)
.+... .....+++.+. +..+++-..++.|..++...+....... ........++++|+ + ++++-...+.|..+
T Consensus 220 ~~l~~~--~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~ 297 (430)
T 3tc9_A 220 TELTKG--QNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILRS 297 (430)
T ss_dssp EEEEEC--SSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEE
T ss_pred eeeccC--CCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEEE
Confidence 12111 11224578884 4445555567889999988665422222 22245788999998 7 55555677889998
Q ss_pred eCC
Q 022324 260 GLS 262 (299)
Q Consensus 260 d~~ 262 (299)
+..
T Consensus 298 ~~d 300 (430)
T 3tc9_A 298 DYD 300 (430)
T ss_dssp EEE
T ss_pred eCC
Confidence 764
No 280
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.17 E-value=0.017 Score=49.09 Aligned_cols=140 Identities=6% Similarity=-0.064 Sum_probs=78.0
Q ss_pred eeEEEEecC---CCEEEEEcCCeEEEEecCCceeeeeccCCccceeeeeccCCCeEEEecCCC-----cEEEEEcCCcce
Q 022324 154 ASLVDFDFD---ESKIVGLIGTRICIWRRNGLRSVFPSREGTFMKGLCMRYFDPEAVVGCEDG-----TARVFDMYSRKC 225 (299)
Q Consensus 154 ~~~~~~~~~---~~~l~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~-----~i~iwd~~~~~~ 225 (299)
+..++++|+ +++.++...+.|+.+|..++..............+++.+++. |+.+...+ .+...+...+..
T Consensus 141 P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~~~~~ 219 (433)
T 4hw6_A 141 IWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKTTNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRASGFT 219 (433)
T ss_dssp CCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEECCCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECGGGTTC
T ss_pred CceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEeecCCCCccEEEECCCCC-EEEEcCCCCcccceEEEEECCCCee
Confidence 345889884 444445444899999987664322222222233568888888 44444321 133333322111
Q ss_pred -eeeccccCCceeEEEeCC-C-CeEEEEeCCCcEEEEeCCCCceEEEeeccCCCCcEEEEEccCCCCeEEeee
Q 022324 226 -SQIIRMHCAPVTSLSLSE-D-QLIISGSSLGSIAISGLSSDQRVATLRSTDCTGHIICLMYPQFLHMLFFLC 295 (299)
Q Consensus 226 -~~~~~~~~~~i~~~~~~~-~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~s~s 295 (299)
...+ ........++++| + .++++-..++.|+.+|..+++....+........-..++|+|+|++|..+.
T Consensus 220 ~~~~~-~~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad 291 (433)
T 4hw6_A 220 ERLSL-CNARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIY 291 (433)
T ss_dssp CEEEE-EECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEE
T ss_pred ccccc-cccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEe
Confidence 0111 1234457788898 5 555555567889999998776633332221111345799999998665543
No 281
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.15 E-value=0.0027 Score=57.56 Aligned_cols=162 Identities=14% Similarity=0.138 Sum_probs=93.2
Q ss_pred CCcEEEEecCCceeEEEecCCCceeEEEEecCCCEEE-E-EcCCeEEEEecCC----ce-eeeeccCCccceeeeeccCC
Q 022324 131 DKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIV-G-LIGTRICIWRRNG----LR-SVFPSREGTFMKGLCMRYFD 203 (299)
Q Consensus 131 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~-~~d~~i~v~d~~~----~~-~~~~~~~~~~~~~~~~~~~~ 203 (299)
...|+..++.+.+....+.....+..++|++.+..|+ + ...+.|+.+++.+ .. ..+..........+++.+.+
T Consensus 385 ~~~I~~id~~~~~~~~~~~~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~ 464 (699)
T 1n7d_A 385 RHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIH 464 (699)
T ss_dssp TTC-CEECTTSCCEECCSCCCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSS
T ss_pred ccceEEEeCCCCcceeeeccCcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeC
Confidence 3577888887766655555445566799998777766 3 3467899999875 21 11111111112235666555
Q ss_pred CeEE-EecCCCcEEEEEcCCcceeeeccccCCceeEEEeCCC-CeEEEEe-CC-CcEEEEeCCCCceEEEeeccCCCCcE
Q 022324 204 PEAV-VGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGS-SL-GSIAISGLSSDQRVATLRSTDCTGHI 279 (299)
Q Consensus 204 ~~l~-s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~-~~l~~~~-~d-g~i~iwd~~~~~~~~~~~~~~~~~~i 279 (299)
..|+ +-...+.|.++++........+.........++++|. .+|+.+. .. +.|..+++. +.....+..... ...
T Consensus 465 g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~d-G~~~~~l~~~~l-~~P 542 (699)
T 1n7d_A 465 SNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN-GVDIYSLVTENI-QWP 542 (699)
T ss_dssp SBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSS-SCCCCEESCSSC-SSC
T ss_pred CcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCC-CCCeeEEEeCCC-CCc
Confidence 5554 4455788999998754433333333345678999986 4444433 33 778888875 333333321111 156
Q ss_pred EEEEccCCCCeEEee
Q 022324 280 ICLMYPQFLHMLFFL 294 (299)
Q Consensus 280 ~~~~~s~~g~~l~s~ 294 (299)
+.|+|+|++..|+.+
T Consensus 543 nGlavd~~~~~LY~a 557 (699)
T 1n7d_A 543 NGITLDLLSGRLYWV 557 (699)
T ss_dssp CCEEECTTTCCEEEE
T ss_pred cEEEEeccCCEEEEE
Confidence 789999876665544
No 282
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.15 E-value=0.077 Score=43.63 Aligned_cols=168 Identities=13% Similarity=0.078 Sum_probs=98.2
Q ss_pred CeeEEEec--CC-EEEEEeCCCcEEEEecCCceeEEEecC-CCceeEEEEecCCCEEE-E-EcCCeEEEEecCCcee-ee
Q 022324 114 GVDQCRMK--RG-LILTGVGDKVMRLWSLEGYKCVEEYSL-PNAASLVDFDFDESKIV-G-LIGTRICIWRRNGLRS-VF 186 (299)
Q Consensus 114 ~i~~~~~~--~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~-~-~~d~~i~v~d~~~~~~-~~ 186 (299)
....++|. ++ ++++-...+.|..++.........+.. -.....+++++.+..|+ + ...+.|.+.++.+... .+
T Consensus 74 ~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l 153 (349)
T 3v64_C 74 NAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVL 153 (349)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE
T ss_pred ceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEE
Confidence 45677773 34 444555678888888876554333332 23345588888666665 3 4467899999876532 22
Q ss_pred eccCCccceeeeeccCCCeEE-EecCC-CcEEEEEcCCcceeeec-cccCCceeEEEeCCC-C-eEEEEeCCCcEEEEeC
Q 022324 187 PSREGTFMKGLCMRYFDPEAV-VGCED-GTARVFDMYSRKCSQII-RMHCAPVTSLSLSED-Q-LIISGSSLGSIAISGL 261 (299)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~l~-s~~~d-~~i~iwd~~~~~~~~~~-~~~~~~i~~~~~~~~-~-~l~~~~~dg~i~iwd~ 261 (299)
..........+++.+.+..++ +-... +.|..+++.. .....+ ...-...+.++++|+ . ++++-...+.|..+|+
T Consensus 154 ~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG-~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~ 232 (349)
T 3v64_C 154 LWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDG-SGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANL 232 (349)
T ss_dssp ECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTS-CSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred EeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCC-CCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeC
Confidence 211112233567887666644 43344 7788888773 333333 223445789999976 4 4555556778999998
Q ss_pred CCCceEEEeeccCCCCcEEEEEc
Q 022324 262 SSDQRVATLRSTDCTGHIICLMY 284 (299)
Q Consensus 262 ~~~~~~~~~~~~~~~~~i~~~~~ 284 (299)
........+..... ...++++
T Consensus 233 dG~~~~~~~~~~~~--~P~giav 253 (349)
T 3v64_C 233 DGSHRKAVISQGLP--HPFAITV 253 (349)
T ss_dssp TSCSCEEEECSSCS--SEEEEEE
T ss_pred CCCceEEEEeCCCC--CceEEEE
Confidence 64332222222222 5677777
No 283
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.15 E-value=0.072 Score=43.19 Aligned_cols=156 Identities=13% Similarity=0.050 Sum_probs=96.0
Q ss_pred eeEEEe--cCC-EEEEEeCCCcEEEEecCCceeEEEe-cCCCceeEEEEecCCCEEE-EEc--CCeEEEEecCCce-eee
Q 022324 115 VDQCRM--KRG-LILTGVGDKVMRLWSLEGYKCVEEY-SLPNAASLVDFDFDESKIV-GLI--GTRICIWRRNGLR-SVF 186 (299)
Q Consensus 115 i~~~~~--~~~-~l~s~~~dg~i~iwd~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~-~~~--d~~i~v~d~~~~~-~~~ 186 (299)
...+++ .++ +.++-...+.|.+++.........+ .....+..++++|.+..|+ +.. .+.|...+..... ..+
T Consensus 81 p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~ 160 (318)
T 3sov_A 81 PDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFII 160 (318)
T ss_dssp CCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEE
T ss_pred ccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEE
Confidence 344555 244 4455556778999987643322222 2234455699998777776 442 5788888887543 222
Q ss_pred eccCCccceeeeeccCCCeEEE-ecCCCcEEEEEcCCcceeeec-cccCCceeEEEeCCCCeEEEEeCCCcEEEEeCCCC
Q 022324 187 PSREGTFMKGLCMRYFDPEAVV-GCEDGTARVFDMYSRKCSQII-RMHCAPVTSLSLSEDQLIISGSSLGSIAISGLSSD 264 (299)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~l~s-~~~d~~i~iwd~~~~~~~~~~-~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 264 (299)
....-.....+++.+.+..|+. -...+.|..+|+.. .....+ .........+++..+.++.+-...+.|..++..+|
T Consensus 161 ~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG-~~~~~~~~~~~~~P~glav~~~~lywtd~~~~~V~~~~~~~G 239 (318)
T 3sov_A 161 INSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDG-TNRQAVVKGSLPHPFALTLFEDILYWTDWSTHSILACNKYTG 239 (318)
T ss_dssp ECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS-CSCEEEECSCCSCEEEEEEETTEEEEEETTTTEEEEEETTTC
T ss_pred EECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCC-CceEEEecCCCCCceEEEEeCCEEEEEecCCCeEEEEECCCC
Confidence 1112222335788887777554 45577899999873 332322 22344567788866666777777889999999877
Q ss_pred ceEEEee
Q 022324 265 QRVATLR 271 (299)
Q Consensus 265 ~~~~~~~ 271 (299)
+....+.
T Consensus 240 ~~~~~i~ 246 (318)
T 3sov_A 240 EGLREIH 246 (318)
T ss_dssp CSCEEEE
T ss_pred CceEEEe
Confidence 7655554
No 284
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.09 E-value=0.068 Score=43.30 Aligned_cols=149 Identities=5% Similarity=-0.041 Sum_probs=92.2
Q ss_pred eeEEEec--CCEEEEEe-CCCcEEEEecCCceeEEE-ecC----CC-c-eeE-EEE---ecCCCEEEEEc----------
Q 022324 115 VDQCRMK--RGLILTGV-GDKVMRLWSLEGYKCVEE-YSL----PN-A-ASL-VDF---DFDESKIVGLI---------- 170 (299)
Q Consensus 115 i~~~~~~--~~~l~s~~-~dg~i~iwd~~~~~~~~~-~~~----~~-~-~~~-~~~---~~~~~~l~~~~---------- 170 (299)
--++.|. ++.|..++ ..++|..||...+..... +.. .+ . ... +.+ .++++++++..
T Consensus 15 PE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~ 94 (334)
T 2p9w_A 15 PEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQ 94 (334)
T ss_dssp CSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSC
T ss_pred CcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEccccccccccc
Confidence 3456783 35555555 799999999986644333 322 11 1 223 888 68877766322
Q ss_pred ----CCeEEEEecC---Cceeeeecc----C-C---------ccceeeeeccCCCeEEEecCC-CcEEEEEcCCcceeee
Q 022324 171 ----GTRICIWRRN---GLRSVFPSR----E-G---------TFMKGLCMRYFDPEAVVGCED-GTARVFDMYSRKCSQI 228 (299)
Q Consensus 171 ----d~~i~v~d~~---~~~~~~~~~----~-~---------~~~~~~~~~~~~~~l~s~~~d-~~i~iwd~~~~~~~~~ 228 (299)
+..+..||+. +++..+... . + ....-+++.+.++-.++++.. +.|...+.. ++.+..
T Consensus 95 ~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pd-G~~~~~ 173 (334)
T 2p9w_A 95 SSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSAD-GKTVST 173 (334)
T ss_dssp CSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTT-SCCEEE
T ss_pred ccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCC-CCEEee
Confidence 5789999998 554322111 0 0 112235677777777877777 777777766 333332
Q ss_pred cc------ccCCceeEEEeCCC-CeEEEEeCCCcEEEEeCCCC
Q 022324 229 IR------MHCAPVTSLSLSED-QLIISGSSLGSIAISGLSSD 264 (299)
Q Consensus 229 ~~------~~~~~i~~~~~~~~-~~l~~~~~dg~i~iwd~~~~ 264 (299)
+. ......+.|+++|+ ..|++....|.|.-+|+.+.
T Consensus 174 ~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~p 216 (334)
T 2p9w_A 174 FAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKP 216 (334)
T ss_dssp EEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSS
T ss_pred eeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCC
Confidence 21 11223679999998 77777766999999998743
No 285
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.03 E-value=0.13 Score=43.80 Aligned_cols=146 Identities=7% Similarity=-0.087 Sum_probs=87.0
Q ss_pred eeEEEe-cC---CEEEEEeCCCcEEEEecCCceeEEEecCCCceeEEEEecCCCEEEEEcCC-----eEEEEecCCce--
Q 022324 115 VDQCRM-KR---GLILTGVGDKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIVGLIGT-----RICIWRRNGLR-- 183 (299)
Q Consensus 115 i~~~~~-~~---~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~-----~i~v~d~~~~~-- 183 (299)
-..+++ ++ +.|+.+...+.|+.+|..+++..........+..++++++++++++...+ .+...+.....
T Consensus 141 P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~~~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~~~~ 220 (433)
T 4hw6_A 141 IWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKTTNIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASGFTE 220 (433)
T ss_dssp CCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEECCCCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGTTCC
T ss_pred CceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEeecCCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCCCeec
Confidence 346777 42 46666555589999999888776555544456669999999954454422 23344432221
Q ss_pred -eeeeccCCccceeeeeccCCCeEE-EecCCCcEEEEEcCCcceeeec-c-ccCCceeEEEeCCC-C-eEEEEeCCCcEE
Q 022324 184 -SVFPSREGTFMKGLCMRYFDPEAV-VGCEDGTARVFDMYSRKCSQII-R-MHCAPVTSLSLSED-Q-LIISGSSLGSIA 257 (299)
Q Consensus 184 -~~~~~~~~~~~~~~~~~~~~~~l~-s~~~d~~i~iwd~~~~~~~~~~-~-~~~~~i~~~~~~~~-~-~l~~~~~dg~i~ 257 (299)
..+.. ......+++.+.+..|+ +-..++.|..+|..++.....+ . ........++++|+ + ++++-...+.|+
T Consensus 221 ~~~~~~--~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~ 298 (433)
T 4hw6_A 221 RLSLCN--ARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIY 298 (433)
T ss_dssp EEEEEE--CSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEE
T ss_pred cccccc--cCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEE
Confidence 11111 11122357777444444 4446778999998877652222 1 11222346999998 6 555556678899
Q ss_pred EEeCC
Q 022324 258 ISGLS 262 (299)
Q Consensus 258 iwd~~ 262 (299)
.+++.
T Consensus 299 ~~~~d 303 (433)
T 4hw6_A 299 RVDYN 303 (433)
T ss_dssp EEEBC
T ss_pred EEeCC
Confidence 98865
No 286
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=96.83 E-value=0.006 Score=55.33 Aligned_cols=156 Identities=12% Similarity=0.036 Sum_probs=92.2
Q ss_pred EEEe--cCC-EEEEEeCCCcEEEEecCCceeEEEecCC-CceeEEEEecCCCEEE-EEc--CCeEEEEecCCcee-eeec
Q 022324 117 QCRM--KRG-LILTGVGDKVMRLWSLEGYKCVEEYSLP-NAASLVDFDFDESKIV-GLI--GTRICIWRRNGLRS-VFPS 188 (299)
Q Consensus 117 ~~~~--~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~-~~~--d~~i~v~d~~~~~~-~~~~ 188 (299)
.+++ .++ ++++-...+.|.+.+.........+... .....++++|.+..|+ +.. .+.|.++++.+... ++..
T Consensus 457 glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~ 536 (699)
T 1n7d_A 457 GLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVT 536 (699)
T ss_dssp CEECCCSSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESC
T ss_pred eEEEEeeCCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEe
Confidence 3555 344 4445456788999988754433333322 3344588988766655 332 36788887765432 2211
Q ss_pred cCCccceeeeeccCCCeEE-EecCCCcEEEEEcCCcceeeecc---ccCCceeEEEeCCCCeEEEEeCCCcEEEEeCCCC
Q 022324 189 REGTFMKGLCMRYFDPEAV-VGCEDGTARVFDMYSRKCSQIIR---MHCAPVTSLSLSEDQLIISGSSLGSIAISGLSSD 264 (299)
Q Consensus 189 ~~~~~~~~~~~~~~~~~l~-s~~~d~~i~iwd~~~~~~~~~~~---~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 264 (299)
........+++.+.+..|+ +-...+.|..+|+... ....+. ........|++..+.++++....+.|..+|..++
T Consensus 537 ~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~-~~~~~~~~~~~~~~P~glavd~~~lywtd~~~~~V~~~d~~~G 615 (699)
T 1n7d_A 537 ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG-NRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTG 615 (699)
T ss_dssp SSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSS-CCEEECCCSSSCSSCCCCEEETTEEEEECSTTTCEEEEETTTE
T ss_pred CCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCC-ceEEEEecCCcCCCceEeEEECCEEEEEeCCCCeEEEEEccCC
Confidence 1112233568888776654 4456678999998643 222222 1123345666666666777777889999999888
Q ss_pred ceEEEeecc
Q 022324 265 QRVATLRST 273 (299)
Q Consensus 265 ~~~~~~~~~ 273 (299)
+.+..+...
T Consensus 616 ~~~~~i~~~ 624 (699)
T 1n7d_A 616 SDVNLLAEN 624 (699)
T ss_dssp EEEECCCTT
T ss_pred CceEEeecC
Confidence 887777543
No 287
>3l2o_B F-box only protein 4; small G protein fold, UBL conjugation pathway, ubiquitin Pro ligase, protein binding-cell cycle complex; 2.80A {Homo sapiens}
Probab=96.70 E-value=0.0011 Score=52.36 Aligned_cols=52 Identities=21% Similarity=0.250 Sum_probs=47.8
Q ss_pred cchhccCcHHHHHHHhhccCccchhhHHHhhhhHHHHhhhhhHHHHHHhhhc
Q 022324 21 RATIESLNGDIICMIFSSLGFFDLVRCSAVCKSWNAIINRCKLLQLLYCKLH 72 (299)
Q Consensus 21 ~~~~~~~~~~~~~~i~~~~~h~~~v~~~~~~~~~~~l~~~~~~w~~~~~~~~ 72 (299)
+..+..+|.++...|++|+++.++.++..+|+.|+.++.+..+|+.++.+..
T Consensus 2 ~~~l~~LP~ei~l~IlsfL~p~DL~~l~~vcr~Wr~la~D~~LWr~~l~rd~ 53 (312)
T 3l2o_B 2 ASTLTRLPIDVQLYILSFLSPHDLCQLGSTNHYWNETVRDPILWRYFLLRDL 53 (312)
T ss_dssp CCHHHHSCHHHHHHHHHTSCHHHHHHHHTTCHHHHHHHTCHHHHHHHHHSSG
T ss_pred cchhHhCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhccchHHHHHHhccC
Confidence 4568889999999999999999999999999999999999999999888753
No 288
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=96.66 E-value=0.083 Score=45.52 Aligned_cols=138 Identities=9% Similarity=0.051 Sum_probs=79.9
Q ss_pred eEEEEec-CCCEEE-EEc-CCeEEEEecCCceeeeeccCC--c--cceeeee-------ccCCCeEEEecCCC-------
Q 022324 155 SLVDFDF-DESKIV-GLI-GTRICIWRRNGLRSVFPSREG--T--FMKGLCM-------RYFDPEAVVGCEDG------- 213 (299)
Q Consensus 155 ~~~~~~~-~~~~l~-~~~-d~~i~v~d~~~~~~~~~~~~~--~--~~~~~~~-------~~~~~~l~s~~~d~------- 213 (299)
..++|+| +...|+ +.. .+.|++.|+.+.........+ . ....+++ .+++..++++...+
T Consensus 142 ~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~ 221 (496)
T 3kya_A 142 GRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESP 221 (496)
T ss_dssp EEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEE
T ss_pred CEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccCc
Confidence 3589998 355555 444 367888998886532211111 1 1234677 88888666655443
Q ss_pred cEEEEEcCC-ccee-----eeccccCCceeEEEeCCC--CeEEEEeCCCcEEEEeCC-------CCce-----------E
Q 022324 214 TARVFDMYS-RKCS-----QIIRMHCAPVTSLSLSED--QLIISGSSLGSIAISGLS-------SDQR-----------V 267 (299)
Q Consensus 214 ~i~iwd~~~-~~~~-----~~~~~~~~~i~~~~~~~~--~~l~~~~~dg~i~iwd~~-------~~~~-----------~ 267 (299)
.|.+++... +... ..+.. ......++++|+ .++++-..++.|..+|+. ++.. .
T Consensus 222 ~V~~i~r~~~G~~~~~~~~~~v~~-~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~ 300 (496)
T 3kya_A 222 SVYIIKRNADGTFDDRSDIQLIAA-YKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTF 300 (496)
T ss_dssp EEEEEECCTTSCCSTTSCEEEEEE-ESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTE
T ss_pred eEEEEecCCCCceeecccceeecc-CCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeeccccccccccc
Confidence 266666443 2221 22222 223567888995 556666678889999987 4543 1
Q ss_pred EE-eeccCCCCcEEEEEccCCCCeEEee
Q 022324 268 AT-LRSTDCTGHIICLMYPQFLHMLFFL 294 (299)
Q Consensus 268 ~~-~~~~~~~~~i~~~~~s~~g~~l~s~ 294 (299)
.. +..... ...+.++|+|+|++|..+
T Consensus 301 ~~l~~~~~~-~~p~~ia~~p~G~~lYva 327 (496)
T 3kya_A 301 KQLFTIADP-SWEFQIFIHPTGKYAYFG 327 (496)
T ss_dssp EEEEECSSS-SCCEEEEECTTSSEEEEE
T ss_pred ceeEecCCC-CCceEEEEcCCCCEEEEE
Confidence 22 222221 156899999999965443
No 289
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=96.65 E-value=0.34 Score=43.30 Aligned_cols=169 Identities=14% Similarity=0.100 Sum_probs=101.8
Q ss_pred CCEEEEEeCCCcEEEEecCCceeEEEec--CCCceeEEEEecCCCEEE-E-EcCCeEEEEecCCce-eeeeccCCcccee
Q 022324 122 RGLILTGVGDKVMRLWSLEGYKCVEEYS--LPNAASLVDFDFDESKIV-G-LIGTRICIWRRNGLR-SVFPSREGTFMKG 196 (299)
Q Consensus 122 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~-~-~~d~~i~v~d~~~~~-~~~~~~~~~~~~~ 196 (299)
..+|+.+ ....|+..++.+......+. .-..+..++|++.+..|+ + ..++.|+.+++.+.. ..+..........
T Consensus 6 ~~~Ll~s-~~~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~G 84 (628)
T 4a0p_A 6 EAFLLFS-RRADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEG 84 (628)
T ss_dssp CCEEEEE-ETTEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCE
T ss_pred CcEEEEE-eCCcEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcce
Confidence 3344443 45778888988655444333 224566799999877777 4 346799999887653 1111111122234
Q ss_pred eeeccCCCeE-EEecCCCcEEEEEcCCcceeeeccccCCceeEEEeCCC-CeEEEEe--CCCcEEEEeCCCCceEEEeec
Q 022324 197 LCMRYFDPEA-VVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGS--SLGSIAISGLSSDQRVATLRS 272 (299)
Q Consensus 197 ~~~~~~~~~l-~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~-~~l~~~~--~dg~i~iwd~~~~~~~~~~~~ 272 (299)
+++.+.+..| ++-...+.|.+.++........+...-.....|+++|. ..|.... ..+.|...++.... ...+-.
T Consensus 85 lAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~-~~~l~~ 163 (628)
T 4a0p_A 85 MAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSE-RTTLVP 163 (628)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS-CEEEEC
T ss_pred EEEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCc-eEEEEC
Confidence 6777666665 44455778999998743322222233455789999986 5555544 35678888875433 333322
Q ss_pred cCCCCcEEEEEccCCCCeEEee
Q 022324 273 TDCTGHIICLMYPQFLHMLFFL 294 (299)
Q Consensus 273 ~~~~~~i~~~~~s~~g~~l~s~ 294 (299)
.-. ....+++++++..|..+
T Consensus 164 ~~~--~P~GlalD~~~~~LY~a 183 (628)
T 4a0p_A 164 NVG--RANGLTIDYAKRRLYWT 183 (628)
T ss_dssp SCS--SEEEEEEETTTTEEEEE
T ss_pred CCC--CcceEEEccccCEEEEE
Confidence 222 78899999987766654
No 290
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=96.63 E-value=0.2 Score=40.42 Aligned_cols=171 Identities=10% Similarity=-0.008 Sum_probs=96.2
Q ss_pred cCeeEEEec--CC-EEEEEeCCCcEEEEecCC----ceeEEEecCC-CceeEEEEecCCCEEE-E-EcCCeEEEEecCCc
Q 022324 113 VGVDQCRMK--RG-LILTGVGDKVMRLWSLEG----YKCVEEYSLP-NAASLVDFDFDESKIV-G-LIGTRICIWRRNGL 182 (299)
Q Consensus 113 ~~i~~~~~~--~~-~l~s~~~dg~i~iwd~~~----~~~~~~~~~~-~~~~~~~~~~~~~~l~-~-~~d~~i~v~d~~~~ 182 (299)
.....+.|. ++ ++++-..++.|..++... ......+... ..+..+++++.+..|+ + ...+.|.++++.+.
T Consensus 30 ~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~ 109 (316)
T 1ijq_A 30 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV 109 (316)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSS
T ss_pred CceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCC
Confidence 345677783 34 445555668999999875 2222223222 3344588887666555 4 45779999998765
Q ss_pred e-eeeeccCCccceeeeeccCCCeEEEecC-C-CcEEEEEcCCcceeeecc-ccCCceeEEEeCCC-Ce-EEEEeCCCcE
Q 022324 183 R-SVFPSREGTFMKGLCMRYFDPEAVVGCE-D-GTARVFDMYSRKCSQIIR-MHCAPVTSLSLSED-QL-IISGSSLGSI 256 (299)
Q Consensus 183 ~-~~~~~~~~~~~~~~~~~~~~~~l~s~~~-d-~~i~iwd~~~~~~~~~~~-~~~~~i~~~~~~~~-~~-l~~~~~dg~i 256 (299)
. ..+..........+++.+.+..++.... . +.|...++. ++....+. ..-.....++++++ .. +++-+..+.|
T Consensus 110 ~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~d-G~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I 188 (316)
T 1ijq_A 110 KRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN-GVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSI 188 (316)
T ss_dssp SEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETT-SCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEE
T ss_pred ceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCC-CCCeEEEEECCCCCceEEEEeccCCEEEEEECCCCeE
Confidence 3 2222111122334678877666554443 2 678888876 44333332 23356789999976 44 4555567789
Q ss_pred EEEeCCCCceEEEeec-cCCCCcEEEEEcc
Q 022324 257 AISGLSSDQRVATLRS-TDCTGHIICLMYP 285 (299)
Q Consensus 257 ~iwd~~~~~~~~~~~~-~~~~~~i~~~~~s 285 (299)
..+|+.. .....+.. ........++++.
T Consensus 189 ~~~d~dg-~~~~~~~~~~~~~~~P~giav~ 217 (316)
T 1ijq_A 189 SSIDVNG-GNRKTILEDEKRLAHPFSLAVF 217 (316)
T ss_dssp EEEETTS-CSCEEEEECTTTTSSEEEEEEE
T ss_pred EEEecCC-CceEEEeecCCccCCcEEEEEE
Confidence 9999864 33333322 1111146777774
No 291
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=96.60 E-value=0.2 Score=39.93 Aligned_cols=144 Identities=11% Similarity=0.051 Sum_probs=72.7
Q ss_pred cCCEEEEEeCC-----CcEEEEecCCce---eEEEecCCCceeE-EEEecCCCEEE-EEcC-----CeEEEEecCCce-e
Q 022324 121 KRGLILTGVGD-----KVMRLWSLEGYK---CVEEYSLPNAASL-VDFDFDESKIV-GLIG-----TRICIWRRNGLR-S 184 (299)
Q Consensus 121 ~~~~l~s~~~d-----g~i~iwd~~~~~---~~~~~~~~~~~~~-~~~~~~~~~l~-~~~d-----~~i~v~d~~~~~-~ 184 (299)
.+.+++.|+.+ ..+.+||..+.+ ....-..+..... .+...++++++ |+.+ ..+.+||+.+.. .
T Consensus 62 ~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~ 141 (301)
T 2vpj_A 62 HDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQWS 141 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEE
T ss_pred CCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEEECCEEEEEcccCCCcccceEEEEcCCCCeEE
Confidence 33366666654 468899988766 3332222222111 22223555555 5433 368899988765 1
Q ss_pred eeeccCCccceeeeeccCCCeEEEecCC-----CcEEEEEcCCcce--eeeccccCCceeEEEeCCCCeEEEEeCC----
Q 022324 185 VFPSREGTFMKGLCMRYFDPEAVVGCED-----GTARVFDMYSRKC--SQIIRMHCAPVTSLSLSEDQLIISGSSL---- 253 (299)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~l~s~~~d-----~~i~iwd~~~~~~--~~~~~~~~~~i~~~~~~~~~~l~~~~~d---- 253 (299)
.............+...++..++.|+.+ ..+.+||+.+.+- +..+..... -.+++...+++++.|+.+
T Consensus 142 ~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~-~~~~~~~~~~i~v~GG~~~~~~ 220 (301)
T 2vpj_A 142 MLGDMQTAREGAGLVVASGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRS-GAGVALLNDHIYVVGGFDGTAH 220 (301)
T ss_dssp EEEECSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCB-SCEEEEETTEEEEECCBCSSSB
T ss_pred ECCCCCCCcccceEEEECCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccc-cceEEEECCEEEEEeCCCCCcc
Confidence 1111111111111222344445666644 4588899876532 222211111 122333344677777764
Q ss_pred -CcEEEEeCCCCc
Q 022324 254 -GSIAISGLSSDQ 265 (299)
Q Consensus 254 -g~i~iwd~~~~~ 265 (299)
..+.+||+.+.+
T Consensus 221 ~~~v~~yd~~~~~ 233 (301)
T 2vpj_A 221 LSSVEAYNIRTDS 233 (301)
T ss_dssp CCCEEEEETTTTE
T ss_pred cceEEEEeCCCCc
Confidence 468999998765
No 292
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=96.60 E-value=0.43 Score=43.84 Aligned_cols=174 Identities=10% Similarity=0.019 Sum_probs=96.7
Q ss_pred ccCeeEEEec--CC-EEEEEeCCCcEEEEecCCc----eeEEEec-CCCceeEEEEecCCCEEE--EEcCCeEEEEecCC
Q 022324 112 SVGVDQCRMK--RG-LILTGVGDKVMRLWSLEGY----KCVEEYS-LPNAASLVDFDFDESKIV--GLIGTRICIWRRNG 181 (299)
Q Consensus 112 ~~~i~~~~~~--~~-~l~s~~~dg~i~iwd~~~~----~~~~~~~-~~~~~~~~~~~~~~~~l~--~~~d~~i~v~d~~~ 181 (299)
...+..+++. ++ ++++-...+.|+.+++... .....+. .-..+..+++++.+..|+ -...+.|.+.++.+
T Consensus 423 ~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG 502 (791)
T 3m0c_C 423 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKG 502 (791)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCCC
Confidence 3445667772 44 4445555678888887642 2222333 223344588988887666 34467999999986
Q ss_pred cee-eeeccCCccceeeeeccCCCeEEEecC--CCcEEEEEcCCcceeeeccccCCceeEEEeCCC-CeEEEE-eCCCcE
Q 022324 182 LRS-VFPSREGTFMKGLCMRYFDPEAVVGCE--DGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISG-SSLGSI 256 (299)
Q Consensus 182 ~~~-~~~~~~~~~~~~~~~~~~~~~l~s~~~--d~~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~-~~l~~~-~~dg~i 256 (299)
... ++..........+++.+....|+.... .+.|...++.-......+...-.....|++++. ..|..+ ...+.|
T Consensus 503 ~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I 582 (791)
T 3m0c_C 503 VKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSI 582 (791)
T ss_dssp SSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEE
T ss_pred CeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcE
Confidence 642 222212222335688887666655442 367888888733332223233356889999976 544444 456789
Q ss_pred EEEeCCCCceEEEeeccCCCCcEEEEEcc
Q 022324 257 AISGLSSDQRVATLRSTDCTGHIICLMYP 285 (299)
Q Consensus 257 ~iwd~~~~~~~~~~~~~~~~~~i~~~~~s 285 (299)
...++........+..........+|++.
T Consensus 583 ~~~d~dG~~~~~v~~~~~~l~~P~glav~ 611 (791)
T 3m0c_C 583 SSIDVNGGNRKTILEDEKRLAHPFSLAVF 611 (791)
T ss_dssp EEEETTSCSCEEEEECTTTTSSEEEEEEE
T ss_pred EEEecCCCceEEEecCCCccCCCCEEEEe
Confidence 99998644333333321111134566653
No 293
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=96.51 E-value=0.25 Score=40.06 Aligned_cols=138 Identities=12% Similarity=0.021 Sum_probs=86.3
Q ss_pred EEEEecCCCEEE-EE-cCCeEEEEecCCce-eeeeccCC-----c---cceeeee---ccCCCeEEEec-----------
Q 022324 156 LVDFDFDESKIV-GL-IGTRICIWRRNGLR-SVFPSREG-----T---FMKGLCM---RYFDPEAVVGC----------- 210 (299)
Q Consensus 156 ~~~~~~~~~~l~-~~-~d~~i~v~d~~~~~-~~~~~~~~-----~---~~~~~~~---~~~~~~l~s~~----------- 210 (299)
...|++....+. ++ ..++|..||..++. ... ...+ . ....+.+ .+.+..+++..
T Consensus 17 ~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~-~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~ 95 (334)
T 2p9w_A 17 DTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNV-VIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQS 95 (334)
T ss_dssp CEEEETTTTEEEEEETTTTEEEEECTTTCCEEEE-CCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSCC
T ss_pred CccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEE-ecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccccccc
Confidence 378887666665 55 58999999997543 222 1111 1 1234456 45543444332
Q ss_pred --CCCcEEEEEcC---Ccceeeecc--c-----------cCCceeEEEeCCC-CeEEEEeCC-CcEEEEeCCCCceEEEe
Q 022324 211 --EDGTARVFDMY---SRKCSQIIR--M-----------HCAPVTSLSLSED-QLIISGSSL-GSIAISGLSSDQRVATL 270 (299)
Q Consensus 211 --~d~~i~iwd~~---~~~~~~~~~--~-----------~~~~i~~~~~~~~-~~l~~~~~d-g~i~iwd~~~~~~~~~~ 270 (299)
.+..+..||+. +++.+.... . .......++..++ +..++++.. +.|...+.. |+.+..+
T Consensus 96 ~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pd-G~~~~~~ 174 (334)
T 2p9w_A 96 SHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSAD-GKTVSTF 174 (334)
T ss_dssp SSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTT-SCCEEEE
T ss_pred cCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCC-CCEEeee
Confidence 26779999999 777665443 1 1124789999998 888888888 888888875 4433333
Q ss_pred eccC----CCCcEEEEEccCCCCeEEeee
Q 022324 271 RSTD----CTGHIICLMYPQFLHMLFFLC 295 (299)
Q Consensus 271 ~~~~----~~~~i~~~~~s~~g~~l~s~s 295 (299)
.... .....+.++++|+|+.|++..
T Consensus 175 ~~~~~~~~~~~G~nGIv~~pdg~~Liv~~ 203 (334)
T 2p9w_A 175 AWESGNGGQRPGYSGITFDPHSNKLIAFG 203 (334)
T ss_dssp EECCCCSSSCCSCSEEEEETTTTEEEEES
T ss_pred eecCCCcccccCcceEEEeCCCCEEEEEc
Confidence 2111 101367999999998887753
No 294
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=96.37 E-value=0.28 Score=39.07 Aligned_cols=143 Identities=6% Similarity=-0.040 Sum_probs=72.6
Q ss_pred cCCEEEEEeCC-----CcEEEEecCCceeEEEecCCCce--eEEEEecCCCEEE-EEcCC-----eEEEEecCCcee-ee
Q 022324 121 KRGLILTGVGD-----KVMRLWSLEGYKCVEEYSLPNAA--SLVDFDFDESKIV-GLIGT-----RICIWRRNGLRS-VF 186 (299)
Q Consensus 121 ~~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~-~~~d~-----~i~v~d~~~~~~-~~ 186 (299)
.+.+++.|+.+ ..+.+||..+.+....-..+... ..++. .+++.++ |+.++ .+.+||+.+..- ..
T Consensus 61 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~ 139 (302)
T 2xn4_A 61 AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAV-LNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHV 139 (302)
T ss_dssp TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEEEEECSSCEEEEEEEEETTTTEEEEE
T ss_pred CCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEE-ECCEEEEEcCCCCCccCceEEEEeCCCCeEeec
Confidence 33366666654 35888998877654433222221 12222 3555555 65543 688899887651 11
Q ss_pred eccCCccceeeeeccCCCeEEEecCC-------CcEEEEEcCCcc--eeeeccccCCceeEEEeCCCCeEEEEeCC----
Q 022324 187 PSREGTFMKGLCMRYFDPEAVVGCED-------GTARVFDMYSRK--CSQIIRMHCAPVTSLSLSEDQLIISGSSL---- 253 (299)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~l~s~~~d-------~~i~iwd~~~~~--~~~~~~~~~~~i~~~~~~~~~~l~~~~~d---- 253 (299)
...........+...++..++.|+.+ ..+.+||+.+.+ .+..+..... -.+++...+++++.|+.+
T Consensus 140 ~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~-~~~~~~~~~~iyv~GG~~~~~~ 218 (302)
T 2xn4_A 140 APMNTRRSSVGVGVVGGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRS-GAGVGVLNNLLYAVGGHDGPLV 218 (302)
T ss_dssp CCCSSCCBSCEEEEETTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCB-SCEEEEETTEEEEECCBSSSSB
T ss_pred CCCCCcccCceEEEECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccc-cccEEEECCEEEEECCCCCCcc
Confidence 11111111111222344445555532 358889987653 2222221111 123333345677777754
Q ss_pred -CcEEEEeCCCCc
Q 022324 254 -GSIAISGLSSDQ 265 (299)
Q Consensus 254 -g~i~iwd~~~~~ 265 (299)
..+.+||+.+++
T Consensus 219 ~~~~~~yd~~~~~ 231 (302)
T 2xn4_A 219 RKSVEVYDPTTNA 231 (302)
T ss_dssp CCCEEEEETTTTE
T ss_pred cceEEEEeCCCCC
Confidence 368999998764
No 295
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=96.35 E-value=0.22 Score=39.74 Aligned_cols=172 Identities=9% Similarity=-0.001 Sum_probs=84.1
Q ss_pred cCCEEEEEeCC----CcEEEEecCCceeEEEecCCCceeE-EEEecCCCEEE-EEcC------CeEEEEecCCcee-eee
Q 022324 121 KRGLILTGVGD----KVMRLWSLEGYKCVEEYSLPNAASL-VDFDFDESKIV-GLIG------TRICIWRRNGLRS-VFP 187 (299)
Q Consensus 121 ~~~~l~s~~~d----g~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~-~~~d------~~i~v~d~~~~~~-~~~ 187 (299)
.+.+++.|+.+ ..+.+||..+.+....-..+..... .+...++++++ |+.+ ..+.+||+.+..- ...
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~ 134 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKP 134 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEEC
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCC
Confidence 33366666654 5788899988765443332222221 22223555555 5544 3689999987751 111
Q ss_pred ccCCccceeeeeccCCCeEEEecC---------CCcEEEEEcCCcc--eeeeccccCCceeEEEeCCCCeEEEEeCC---
Q 022324 188 SREGTFMKGLCMRYFDPEAVVGCE---------DGTARVFDMYSRK--CSQIIRMHCAPVTSLSLSEDQLIISGSSL--- 253 (299)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~l~s~~~---------d~~i~iwd~~~~~--~~~~~~~~~~~i~~~~~~~~~~l~~~~~d--- 253 (299)
..........+....+..++.|+. -..+.+||+.+.+ .+..+..... -.+++...+++++.|+.+
T Consensus 135 ~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~-~~~~~~~~~~i~v~GG~~~~~ 213 (306)
T 3ii7_A 135 SMLTQRCSHGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARK-NHGLVFVKDKIFAVGGQNGLG 213 (306)
T ss_dssp CCSSCCBSCEEEEETTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCB-SCEEEEETTEEEEECCEETTE
T ss_pred CCcCCcceeEEEEECCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhh-cceEEEECCEEEEEeCCCCCC
Confidence 111111111122234444555543 3458899988653 2222211111 122333345677777654
Q ss_pred --CcEEEEeCCCCceEEEeeccC-CCCcEEEEEccCCCCeEEeeec
Q 022324 254 --GSIAISGLSSDQRVATLRSTD-CTGHIICLMYPQFLHMLFFLCF 296 (299)
Q Consensus 254 --g~i~iwd~~~~~~~~~~~~~~-~~~~i~~~~~s~~g~~l~s~s~ 296 (299)
..+.+||+.+.+-. .+.... .......+.+ ++++++.|+.
T Consensus 214 ~~~~~~~yd~~~~~W~-~~~~~p~~r~~~~~~~~--~~~i~v~GG~ 256 (306)
T 3ii7_A 214 GLDNVEYYDIKLNEWK-MVSPMPWKGVTVKCAAV--GSIVYVLAGF 256 (306)
T ss_dssp EBCCEEEEETTTTEEE-ECCCCSCCBSCCEEEEE--TTEEEEEECB
T ss_pred CCceEEEeeCCCCcEE-ECCCCCCCccceeEEEE--CCEEEEEeCc
Confidence 46889999876422 221111 1001222233 6777777764
No 296
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=96.28 E-value=0.58 Score=41.81 Aligned_cols=157 Identities=13% Similarity=0.038 Sum_probs=95.5
Q ss_pred CeeEEEe--cCC-EEEEEeCCCcEEEEecCCceeEEEe-cCCCceeEEEEecCCCEEE-EEc--CCeEEEEecCCceeee
Q 022324 114 GVDQCRM--KRG-LILTGVGDKVMRLWSLEGYKCVEEY-SLPNAASLVDFDFDESKIV-GLI--GTRICIWRRNGLRSVF 186 (299)
Q Consensus 114 ~i~~~~~--~~~-~l~s~~~dg~i~iwd~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~-~~~--d~~i~v~d~~~~~~~~ 186 (299)
....+++ ..+ +.++-...+.|.+.++........+ ..-..+..++++|....|+ +.. .+.|...++.+.....
T Consensus 81 ~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~ 160 (628)
T 4a0p_A 81 YPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTT 160 (628)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEE
T ss_pred CcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEE
Confidence 3445555 344 4455556678888888644322222 2334556699999766766 442 4688888887653221
Q ss_pred eccCCccceeeeeccCCCeEEEe-cCCCcEEEEEcCCcceeeeccccCCceeEEEeCCCCeEEEEeCCCcEEEEeCCCCc
Q 022324 187 PSREGTFMKGLCMRYFDPEAVVG-CEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSEDQLIISGSSLGSIAISGLSSDQ 265 (299)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~l~s~-~~d~~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~ 265 (299)
..........+++.+.+..|+.+ ...+.|..+|+..... ..+.........+++..+.++++-...+.|...|..+++
T Consensus 161 l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~-~v~~~~l~~P~glav~~~~ly~tD~~~~~I~~~dk~tg~ 239 (628)
T 4a0p_A 161 LVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR-EVIADDLPHPFGLTQYQDYIYWTDWSRRSIERANKTSGQ 239 (628)
T ss_dssp EECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEEECCSCEEEEEEETTEEEEEETTTTEEEEEETTTCC
T ss_pred EECCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce-EEeeccCCCceEEEEECCEEEEecCCCCEEEEEECCCCC
Confidence 11122223356788877775554 4567899999874333 333333344668888766666666678899999987776
Q ss_pred eEEEee
Q 022324 266 RVATLR 271 (299)
Q Consensus 266 ~~~~~~ 271 (299)
....+.
T Consensus 240 ~~~~l~ 245 (628)
T 4a0p_A 240 NRTIIQ 245 (628)
T ss_dssp SCEEEE
T ss_pred ceEEEe
Confidence 555443
No 297
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=96.25 E-value=0.43 Score=39.99 Aligned_cols=174 Identities=10% Similarity=0.027 Sum_probs=96.7
Q ss_pred cccCeeEEEec--CCE-EEEEeCCCcEEEEecCCc----eeEEEec-CCCceeEEEEecCCCEEE--EEcCCeEEEEecC
Q 022324 111 HSVGVDQCRMK--RGL-ILTGVGDKVMRLWSLEGY----KCVEEYS-LPNAASLVDFDFDESKIV--GLIGTRICIWRRN 180 (299)
Q Consensus 111 h~~~i~~~~~~--~~~-l~s~~~dg~i~iwd~~~~----~~~~~~~-~~~~~~~~~~~~~~~~l~--~~~d~~i~v~d~~ 180 (299)
....+..++|. ++. .++-...+.|..+++... .....+. .-..+..+++++.+..|+ -...+.|.+.++.
T Consensus 110 ~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~ 189 (400)
T 3p5b_L 110 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTK 189 (400)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTT
T ss_pred ccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeCC
Confidence 34456778883 444 444455678888887652 2222233 223344588888665555 3456789999988
Q ss_pred Ccee-eeeccCCccceeeeeccCCCeEEEec--CCCcEEEEEcCCcceeeeccccCCceeEEEeCCC-CeEEEE-eCCCc
Q 022324 181 GLRS-VFPSREGTFMKGLCMRYFDPEAVVGC--EDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISG-SSLGS 255 (299)
Q Consensus 181 ~~~~-~~~~~~~~~~~~~~~~~~~~~l~s~~--~d~~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~-~~l~~~-~~dg~ 255 (299)
+... .+..........+++.+.+..++... ..+.|...++.-..........-...+.|+++++ ..|..+ ...+.
T Consensus 190 g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~ 269 (400)
T 3p5b_L 190 GVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHS 269 (400)
T ss_dssp TCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTE
T ss_pred CCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCCCceEEEEEEeCCCEEEEEECCCCE
Confidence 6642 22211222233567887766655443 2477888888733322222233356889999976 544444 55778
Q ss_pred EEEEeCCCCceEEEeeccCCCCcEEEEEc
Q 022324 256 IAISGLSSDQRVATLRSTDCTGHIICLMY 284 (299)
Q Consensus 256 i~iwd~~~~~~~~~~~~~~~~~~i~~~~~ 284 (299)
|..+|+...................++++
T Consensus 270 I~~~d~dG~~~~~~~~~~~~l~~P~gl~v 298 (400)
T 3p5b_L 270 ISSIDVNGGNRKTILEDEKRLAHPFSLAV 298 (400)
T ss_dssp EEEEETTSCCCEEEEECSSTTSSEEEEEE
T ss_pred EEEEeCCCCccEEEEeCCCCCCCCEEEEE
Confidence 99999864332222222111114556666
No 298
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=96.22 E-value=0.62 Score=41.54 Aligned_cols=162 Identities=12% Similarity=0.048 Sum_probs=91.6
Q ss_pred CCcEEEEecCCce--eEEEecCCCceeEEEEecCCCEEE-EEc-CCeEEEEecCCce--eeeeccCCccceeeeeccCCC
Q 022324 131 DKVMRLWSLEGYK--CVEEYSLPNAASLVDFDFDESKIV-GLI-GTRICIWRRNGLR--SVFPSREGTFMKGLCMRYFDP 204 (299)
Q Consensus 131 dg~i~iwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~-~~~-d~~i~v~d~~~~~--~~~~~~~~~~~~~~~~~~~~~ 204 (299)
...|+..++.... .......-..+..+++++.+..|+ +.. .+.|..+++.+.. .......-.....+++.+.+.
T Consensus 17 ~~~I~~i~~~~~~~~~~~~~~~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~~ 96 (619)
T 3s94_A 17 RRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGE 96 (619)
T ss_dssp SSBEEEECCC---------CBCCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTTT
T ss_pred cccEEEEeCCCCcceEEEEEcCCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecCC
Confidence 4667777776542 222333445567799999877776 443 5788888887652 111111112233567877666
Q ss_pred eEE-EecCCCcEEEEEcCCcceeeeccccCCceeEEEeCCC-CeEEEEeC--CCcEEEEeCCCCceEEEeeccCCCCcEE
Q 022324 205 EAV-VGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGSS--LGSIAISGLSSDQRVATLRSTDCTGHII 280 (299)
Q Consensus 205 ~l~-s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~-~~l~~~~~--dg~i~iwd~~~~~~~~~~~~~~~~~~i~ 280 (299)
.++ +-...+.|.+.++........+...-.....|+++|. ..|..... .+.|...++. |.....+-..... ...
T Consensus 97 ~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~d-G~~~~~l~~~~~~-~P~ 174 (619)
T 3s94_A 97 KLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMD-GSSRFIIINSEIY-WPN 174 (619)
T ss_dssp EEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETT-SCSCEEEECSSCS-SEE
T ss_pred EEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECC-CCceEEEEeCCCC-CCc
Confidence 644 4556788999998743322222233455788999986 55544442 4667777765 4433333222221 689
Q ss_pred EEEccCCCCeEEee
Q 022324 281 CLMYPQFLHMLFFL 294 (299)
Q Consensus 281 ~~~~s~~g~~l~s~ 294 (299)
.+++++++..|..+
T Consensus 175 Glald~~~~~LY~a 188 (619)
T 3s94_A 175 GLTLDYEEQKLYWA 188 (619)
T ss_dssp EEEEETTTTEEEEE
T ss_pred EEEEEccCCEEEEE
Confidence 99999877666554
No 299
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=96.13 E-value=0.24 Score=44.48 Aligned_cols=125 Identities=13% Similarity=0.092 Sum_probs=71.1
Q ss_pred CCceeEEEecCCCceeEEEEec-CCCEEE-EEcCC-----------eEEEEecCCcee----eeeccCCccceeeeeccC
Q 022324 140 EGYKCVEEYSLPNAASLVDFDF-DESKIV-GLIGT-----------RICIWRRNGLRS----VFPSREGTFMKGLCMRYF 202 (299)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~-~~~~l~-~~~d~-----------~i~v~d~~~~~~----~~~~~~~~~~~~~~~~~~ 202 (299)
.+++.......+......++.+ ++++++ |+.+. .+.+||..+..- .............++..+
T Consensus 174 ~~~~W~~~~~~P~~~~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~ 253 (656)
T 1k3i_A 174 GLGRWGPTIDLPIVPAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGN 253 (656)
T ss_dssp TSCEEEEEEECSSCCSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTT
T ss_pred CCCeeeeeccCCCCceeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCC
Confidence 3444333333333344577777 777776 65432 688999987651 111111111112355567
Q ss_pred CCeEEEec-CCCcEEEEEcCCcce--eeeccccCCceeEEEeCCC-CeEEEEe-CC-----CcEEEEeCCCCc
Q 022324 203 DPEAVVGC-EDGTARVFDMYSRKC--SQIIRMHCAPVTSLSLSED-QLIISGS-SL-----GSIAISGLSSDQ 265 (299)
Q Consensus 203 ~~~l~s~~-~d~~i~iwd~~~~~~--~~~~~~~~~~i~~~~~~~~-~~l~~~~-~d-----g~i~iwd~~~~~ 265 (299)
+..++.|+ .+..+.+||..+.+- +..+..... -.+++..++ ++++.|+ .+ ..+.+||..+++
T Consensus 254 g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~-~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~ 325 (656)
T 1k3i_A 254 GQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARG-YQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKT 325 (656)
T ss_dssp SCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCS-SCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTE
T ss_pred CCEEEeCCCCCCceEEecCcCCceeECCCCCcccc-ccceEEecCCeEEEEeCcccCCcccccceEeCCCCCc
Confidence 77788887 456799999886542 222222122 234445555 8888888 44 569999998765
No 300
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=95.99 E-value=0.58 Score=39.33 Aligned_cols=133 Identities=14% Similarity=0.094 Sum_probs=80.9
Q ss_pred EEEEEeCCCcEEEEecCCceeEEEecCC----C-ceeEEEEecCCCEEEEEcCCeEEEEecCCcee--------------
Q 022324 124 LILTGVGDKVMRLWSLEGYKCVEEYSLP----N-AASLVDFDFDESKIVGLIGTRICIWRRNGLRS-------------- 184 (299)
Q Consensus 124 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~----~-~~~~~~~~~~~~~l~~~~d~~i~v~d~~~~~~-------------- 184 (299)
.++.+- ++.||.-++.....-+.+..+ - .+..+..+|+|++|+...+..|.|-.+..+..
T Consensus 34 ~i~~a~-~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ 112 (452)
T 3pbp_A 34 RIVFIQ-DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFNDNEIFVMEVPWGYSNVEDVSIQDAFQIF 112 (452)
T ss_dssp EEEEEE-TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECSSEEEEEECCTTCSCCCCHHHHHTTEEE
T ss_pred EEEEEE-CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecCCeEEEEEecCccccCccccccccccee
Confidence 344333 378888887744434444433 1 34559999999999988888999998873210
Q ss_pred eeecc------CCccceeeeeccCCCe---EEEecCCCcEEEEEcCCcc--eeeecc---------ccCCceeEEEeCCC
Q 022324 185 VFPSR------EGTFMKGLCMRYFDPE---AVVGCEDGTARVFDMYSRK--CSQIIR---------MHCAPVTSLSLSED 244 (299)
Q Consensus 185 ~~~~~------~~~~~~~~~~~~~~~~---l~s~~~d~~i~iwd~~~~~--~~~~~~---------~~~~~i~~~~~~~~ 244 (299)
.+... ...+. -+-|+|.+.. |++-..|+.|++||+.... +. .+. .....|.+++|.++
T Consensus 113 ty~l~~~~~~~~s~I~-qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~~Fg~~ 190 (452)
T 3pbp_A 113 HYSIDEEEVGPKSSIK-KVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDLEFSKD 190 (452)
T ss_dssp EEEGGGCC--CCCCEE-EEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEEEECTT
T ss_pred EEEcCCcccCCCCcee-EEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEEEEEcCC
Confidence 11111 11122 3467777554 8999999999999998522 11 221 12256778888876
Q ss_pred -Ce--EEEEeCCCcEEEE
Q 022324 245 -QL--IISGSSLGSIAIS 259 (299)
Q Consensus 245 -~~--l~~~~~dg~i~iw 259 (299)
-. +++.+.+|.|+-.
T Consensus 191 ~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 191 GLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp SSCEEEEECTTSCEEEEE
T ss_pred CcEEEEEecCCCCCEEEE
Confidence 33 3334466766543
No 301
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=95.93 E-value=0.48 Score=37.75 Aligned_cols=141 Identities=9% Similarity=-0.018 Sum_probs=71.4
Q ss_pred EEEEEeC--CCcEEEEecCCceeEEEecCCCceeE-EEEecCCCEEE-EEcC----CeEEEEecCCce-eeeeccCCccc
Q 022324 124 LILTGVG--DKVMRLWSLEGYKCVEEYSLPNAASL-VDFDFDESKIV-GLIG----TRICIWRRNGLR-SVFPSREGTFM 194 (299)
Q Consensus 124 ~l~s~~~--dg~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~-~~~d----~~i~v~d~~~~~-~~~~~~~~~~~ 194 (299)
+++.|+. ...+.+||..+.+....-..+..... .....++.+++ |+.+ ..+.+||+.+.. ...........
T Consensus 14 l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~ 93 (306)
T 3ii7_A 14 RIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVFWDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRD 93 (306)
T ss_dssp EEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEEETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCB
T ss_pred EEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEEECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCcccc
Confidence 4555554 35788999988765433222221111 22223555555 5543 578899998775 21211111111
Q ss_pred eeeeeccCCCeEEEecCC------CcEEEEEcCCcce--eeeccccCCceeEEEeCCCCeEEEEeC---------CCcEE
Q 022324 195 KGLCMRYFDPEAVVGCED------GTARVFDMYSRKC--SQIIRMHCAPVTSLSLSEDQLIISGSS---------LGSIA 257 (299)
Q Consensus 195 ~~~~~~~~~~~l~s~~~d------~~i~iwd~~~~~~--~~~~~~~~~~i~~~~~~~~~~l~~~~~---------dg~i~ 257 (299)
...+....+..++.|+.+ ..+.+||+.+.+= +..+..... -.+++...+++++.|+. -..+.
T Consensus 94 ~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~-~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~ 172 (306)
T 3ii7_A 94 SLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRC-SHGMVEANGLIYVCGGSLGNNVSGRVLNSCE 172 (306)
T ss_dssp SCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCB-SCEEEEETTEEEEECCEESCTTTCEECCCEE
T ss_pred ceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcc-eeEEEEECCEEEEECCCCCCCCcccccceEE
Confidence 111222344446666654 4588999886542 222211111 12223334466666654 34588
Q ss_pred EEeCCCCc
Q 022324 258 ISGLSSDQ 265 (299)
Q Consensus 258 iwd~~~~~ 265 (299)
+||+.+.+
T Consensus 173 ~yd~~~~~ 180 (306)
T 3ii7_A 173 VYDPATET 180 (306)
T ss_dssp EEETTTTE
T ss_pred EeCCCCCe
Confidence 99998764
No 302
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=95.90 E-value=0.54 Score=38.59 Aligned_cols=99 Identities=13% Similarity=0.120 Sum_probs=55.2
Q ss_pred CceeEEEEecCCCEEEEEcCCeEEEEecCCceeeee-cc----CCccceeeeeccC---CCeEEEecC-C-----CcEEE
Q 022324 152 NAASLVDFDFDESKIVGLIGTRICIWRRNGLRSVFP-SR----EGTFMKGLCMRYF---DPEAVVGCE-D-----GTARV 217 (299)
Q Consensus 152 ~~~~~~~~~~~~~~l~~~~d~~i~v~d~~~~~~~~~-~~----~~~~~~~~~~~~~---~~~l~s~~~-d-----~~i~i 217 (299)
.....++|.|+++++++..++.|++++ ......+. .. .......++++++ +..|+.+.. . +.|..
T Consensus 31 ~~P~~ia~~pdG~l~V~e~~g~I~~i~-~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r 109 (352)
T 2ism_A 31 EVPWALAFLPDGGMLIAERPGRIRLFR-EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVR 109 (352)
T ss_dssp SCEEEEEECTTSCEEEEETTTEEEEEE-TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEE
T ss_pred CCceEEEEcCCCeEEEEeCCCeEEEEE-CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEEE
Confidence 455679999999877787889999998 33221111 10 1112234577776 455544432 1 56777
Q ss_pred EEcCCcc-----ee-eecc---ccCCceeEEEeCCC-CeEEEEe
Q 022324 218 FDMYSRK-----CS-QIIR---MHCAPVTSLSLSED-QLIISGS 251 (299)
Q Consensus 218 wd~~~~~-----~~-~~~~---~~~~~i~~~~~~~~-~~l~~~~ 251 (299)
++...+. .+ ..+. ........++|.|+ .++++.+
T Consensus 110 ~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G 153 (352)
T 2ism_A 110 LRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTG 153 (352)
T ss_dssp EEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECC
T ss_pred EEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEEC
Confidence 8776431 11 1122 11123468999999 6555543
No 303
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=95.86 E-value=0.49 Score=37.81 Aligned_cols=132 Identities=7% Similarity=-0.050 Sum_probs=65.9
Q ss_pred CcEEEEecCCceeEEEecCCCce--eEEEEecCCCEEE-EEcC-----CeEEEEecCCcee-eeeccCCccceeeeeccC
Q 022324 132 KVMRLWSLEGYKCVEEYSLPNAA--SLVDFDFDESKIV-GLIG-----TRICIWRRNGLRS-VFPSREGTFMKGLCMRYF 202 (299)
Q Consensus 132 g~i~iwd~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~-~~~d-----~~i~v~d~~~~~~-~~~~~~~~~~~~~~~~~~ 202 (299)
..+.+||..+.+....-..+... ..++. .++++++ |+.+ ..+.+||+.+..- .............+....
T Consensus 90 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~ 168 (308)
T 1zgk_A 90 SALDCYNPMTNQWSPCAPMSVPRNRIGVGV-IDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVLN 168 (308)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBTCEEEE-ETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEET
T ss_pred ceEEEECCCCCeEeECCCCCcCccccEEEE-ECCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEEC
Confidence 46888998877654332222211 12222 2555555 4432 3688999987651 111111111111122224
Q ss_pred CCeEEEecCC-----CcEEEEEcCCcce--eeeccccCCceeEEEeCCCCeEEEEeCC-----CcEEEEeCCCCc
Q 022324 203 DPEAVVGCED-----GTARVFDMYSRKC--SQIIRMHCAPVTSLSLSEDQLIISGSSL-----GSIAISGLSSDQ 265 (299)
Q Consensus 203 ~~~l~s~~~d-----~~i~iwd~~~~~~--~~~~~~~~~~i~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~ 265 (299)
+..++.|+.+ ..+.+||+.+.+= +..+..... -.+++...+++++.|+.+ ..+.+||+.+.+
T Consensus 169 ~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~-~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~ 242 (308)
T 1zgk_A 169 RLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRS-GAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETET 242 (308)
T ss_dssp TEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCB-SCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred CEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccc-cceEEEECCEEEEEeCCCCCCccceEEEEeCCCCc
Confidence 4445666544 4588899876532 222211111 122333344677777664 568999998764
No 304
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=95.83 E-value=0.45 Score=37.80 Aligned_cols=143 Identities=10% Similarity=-0.063 Sum_probs=72.2
Q ss_pred CC-EEEEEeCC-----CcEEEEecCCceeEEEecCCCceeE-EEEecCCCEEE-EEcC-----CeEEEEecCCcee-eee
Q 022324 122 RG-LILTGVGD-----KVMRLWSLEGYKCVEEYSLPNAASL-VDFDFDESKIV-GLIG-----TRICIWRRNGLRS-VFP 187 (299)
Q Consensus 122 ~~-~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~-~~~d-----~~i~v~d~~~~~~-~~~ 187 (299)
++ +++.|+.+ ..+.+||..+.+....-..+..... .+...++++++ |+.+ ..+.+||+.+..- ...
T Consensus 112 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~ 191 (301)
T 2vpj_A 112 GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVASGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVT 191 (301)
T ss_dssp TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEEEC
T ss_pred CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEECCEEEEECCCCCCcccceEEEEeCCCCcEEeCC
Confidence 44 55556543 3588899887765443222222211 22223555555 5543 4688999987752 111
Q ss_pred ccCCccceeeeeccCCCeEEEecCC-----CcEEEEEcCCcce--eeeccccCCceeEEEeCCCCeEEEEeCC-----Cc
Q 022324 188 SREGTFMKGLCMRYFDPEAVVGCED-----GTARVFDMYSRKC--SQIIRMHCAPVTSLSLSEDQLIISGSSL-----GS 255 (299)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~l~s~~~d-----~~i~iwd~~~~~~--~~~~~~~~~~i~~~~~~~~~~l~~~~~d-----g~ 255 (299)
..........+...++..++.|+.+ ..+.+||+.+.+- +..+...... .+++...+++++.|+.+ ..
T Consensus 192 ~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~-~~~~~~~~~i~v~GG~~~~~~~~~ 270 (301)
T 2vpj_A 192 PMATKRSGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCY-VGATVLRGRLYAIAGYDGNSLLSS 270 (301)
T ss_dssp CCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBS-CEEEEETTEEEEECCBCSSSBEEE
T ss_pred CCCcccccceEEEECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccc-eeEEEECCEEEEEcCcCCCccccc
Confidence 1111111111222344446666653 4688999886542 2222111111 22233344677777765 35
Q ss_pred EEEEeCCCCc
Q 022324 256 IAISGLSSDQ 265 (299)
Q Consensus 256 i~iwd~~~~~ 265 (299)
+.+||+.+.+
T Consensus 271 v~~yd~~~~~ 280 (301)
T 2vpj_A 271 IECYDPIIDS 280 (301)
T ss_dssp EEEEETTTTE
T ss_pred EEEEcCCCCe
Confidence 7888987654
No 305
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=95.75 E-value=1 Score=40.15 Aligned_cols=159 Identities=13% Similarity=0.063 Sum_probs=92.5
Q ss_pred cCeeEEEec--CC-EEEEEeCCCcEEEEecCCceeEEEe-cCCCceeEEEEecCCCEEE-EEc--CCeEEEEecCCce-e
Q 022324 113 VGVDQCRMK--RG-LILTGVGDKVMRLWSLEGYKCVEEY-SLPNAASLVDFDFDESKIV-GLI--GTRICIWRRNGLR-S 184 (299)
Q Consensus 113 ~~i~~~~~~--~~-~l~s~~~dg~i~iwd~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~-~~~--d~~i~v~d~~~~~-~ 184 (299)
.....+++. ++ +.++-...+.|.+.+.........+ ..-..+..++++|.+..|+ +.. .+.|...++.+.. .
T Consensus 84 ~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~ 163 (619)
T 3s94_A 84 LSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRF 163 (619)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCE
T ss_pred CCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceE
Confidence 355667772 45 5555566789999998754332222 2223455699999877666 443 4577777776543 2
Q ss_pred eeeccCCccceeeeeccCCCeEEEe-cCCCcEEEEEcCCcceeeeccccCCceeEEEeCCCCeEEEEeCCCcEEEEeCCC
Q 022324 185 VFPSREGTFMKGLCMRYFDPEAVVG-CEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSEDQLIISGSSLGSIAISGLSS 263 (299)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~l~s~-~~d~~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~ 263 (299)
.+..........+++.+.+..|+.+ ...+.|...|+..................|++.++.++++-...+.|...|..+
T Consensus 164 ~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~gi~~~~~~ly~td~~~~~V~~~d~~t 243 (619)
T 3s94_A 164 IIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFEDILYWTDWSTHSILACNKYT 243 (619)
T ss_dssp EEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC---------CCCEEESSSEEEEECTTTCSEEEEESSS
T ss_pred EEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEEeCCCCCceEEEEeCCEEEEecCCCCEEEEEECCC
Confidence 2221122223356788777775544 456778888886432222222122334577777676666666788999999988
Q ss_pred CceEEEee
Q 022324 264 DQRVATLR 271 (299)
Q Consensus 264 ~~~~~~~~ 271 (299)
++....+.
T Consensus 244 g~~~~~i~ 251 (619)
T 3s94_A 244 GEGLREIH 251 (619)
T ss_dssp CCCCEECC
T ss_pred CcccEEEe
Confidence 76555443
No 306
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=95.72 E-value=0.64 Score=37.63 Aligned_cols=177 Identities=5% Similarity=-0.091 Sum_probs=91.0
Q ss_pred cCeeEEEe-cCCEEEEEeCCCcEEEEecCCceeEEEec-C-CCceeEEEEecCCCEEEEEcCCeEEEE-ecCCce-eeee
Q 022324 113 VGVDQCRM-KRGLILTGVGDKVMRLWSLEGYKCVEEYS-L-PNAASLVDFDFDESKIVGLIGTRICIW-RRNGLR-SVFP 187 (299)
Q Consensus 113 ~~i~~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~-~~~~~~~~~~~~~~~l~~~~d~~i~v~-d~~~~~-~~~~ 187 (299)
+.+..+.+ +++.++.++.+|.|.. ..+.++.-.... . ......+.+.+++.+++.+.++.++.- |-.... ....
T Consensus 122 ~~~~~i~~~~~~~~~~~~~~g~v~~-S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~gG~tW~~~~ 200 (327)
T 2xbg_A 122 GSPRLIKALGNGSAEMITNVGAIYR-TKDSGKNWQALVQEAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPGQTAWEPHN 200 (327)
T ss_dssp SCEEEEEEEETTEEEEEETTCCEEE-ESSTTSSEEEEECSCCCCEEEEEECTTSCEEEEETTSSEEEEECTTCSSCEEEE
T ss_pred CCeEEEEEECCCCEEEEeCCccEEE-EcCCCCCCEEeecCCCcceEEEEEcCCCcEEEEECCCcEEEEeCCCCCceeECC
Confidence 45667766 5554444455665432 122233222222 2 233445888898888876666665543 321111 1111
Q ss_pred ccCCccceeeeeccCCCeEEEecCCCcEEEEEcCCcceeeecc----ccCCceeEEEeCCC-CeEEEEeCCCcEEEEeCC
Q 022324 188 SREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIR----MHCAPVTSLSLSED-QLIISGSSLGSIAISGLS 262 (299)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~----~~~~~i~~~~~~~~-~~l~~~~~dg~i~iwd~~ 262 (299)
.........+.+.+.+. ++.++.+|.+.+.+...++.-..+. .....+..+.+.++ .+++++ .+|.| ++...
T Consensus 201 ~~~~~~~~~~~~~~~g~-~~~~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g-~~g~i-~~S~D 277 (327)
T 2xbg_A 201 RTTSRRLHNMGFTPDGR-LWMIVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAG-GAGAL-LCSQD 277 (327)
T ss_dssp CCSSSCEEEEEECTTSC-EEEEETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEE-STTCE-EEESS
T ss_pred CCCCCccceeEECCCCC-EEEEeCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEe-CCCeE-EEeCC
Confidence 11111122334555544 4555667877776433233222221 12235888988877 655554 47766 45555
Q ss_pred CCceEEEeecc---CCCCcEEEEEccCCCCeEEeee
Q 022324 263 SDQRVATLRST---DCTGHIICLMYPQFLHMLFFLC 295 (299)
Q Consensus 263 ~~~~~~~~~~~---~~~~~i~~~~~s~~g~~l~s~s 295 (299)
.|+.-..+... .. .+.++.|.++++.+++|.
T Consensus 278 gG~tW~~~~~~~~~~~--~~~~v~~~~~~~~~~~G~ 311 (327)
T 2xbg_A 278 GGQTWQQDVDVKKVPS--NFYKILFFSPDQGFILGQ 311 (327)
T ss_dssp TTSSCEECGGGTTSSS--CCCEEEEEETTEEEEECS
T ss_pred CCcccEEcCccCCCCC--CeEEEEEECCCceEEEcC
Confidence 56555544422 22 678888877777666654
No 307
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=95.67 E-value=0.029 Score=45.87 Aligned_cols=108 Identities=6% Similarity=0.008 Sum_probs=70.3
Q ss_pred CEEEEEeCCCcEEEEecCCceeEEEecCC--CceeEEEE--ec-CCCEEEE--EcCCeEEEEecCCceeeeeccCCccce
Q 022324 123 GLILTGVGDKVMRLWSLEGYKCVEEYSLP--NAASLVDF--DF-DESKIVG--LIGTRICIWRRNGLRSVFPSREGTFMK 195 (299)
Q Consensus 123 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~--~~~~~~~~--~~-~~~~l~~--~~d~~i~v~d~~~~~~~~~~~~~~~~~ 195 (299)
+.++.++.||.|.-.|.++|+...+++.. .+.+...- .+ ++..+++ +.||.++.++..++...+.........
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~ 90 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVS 90 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHT
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeecccccee
Confidence 48999999999999999999999988765 22222110 01 2233443 689999999988775332211111000
Q ss_pred e--eeec-----------cCCCeEEEecCCCcEEEEEcCCcceeeecc
Q 022324 196 G--LCMR-----------YFDPEAVVGCEDGTARVFDMYSRKCSQIIR 230 (299)
Q Consensus 196 ~--~~~~-----------~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~ 230 (299)
. +... ..+..+++|+.++.+...|+++|+.+.++.
T Consensus 91 ~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~ 138 (339)
T 2be1_A 91 TSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFG 138 (339)
T ss_dssp TCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEES
T ss_pred ccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEe
Confidence 0 0000 034557899999999999999999888775
No 308
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=95.66 E-value=0.64 Score=37.23 Aligned_cols=160 Identities=9% Similarity=0.034 Sum_probs=75.5
Q ss_pred EEEEecCCceeEEEecCCCceeE-EEEecCCCEEE-EEcC--------CeEEEEecCCce-eeeeccCCccceeeeeccC
Q 022324 134 MRLWSLEGYKCVEEYSLPNAASL-VDFDFDESKIV-GLIG--------TRICIWRRNGLR-SVFPSREGTFMKGLCMRYF 202 (299)
Q Consensus 134 i~iwd~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~-~~~d--------~~i~v~d~~~~~-~~~~~~~~~~~~~~~~~~~ 202 (299)
+.+||..+.+....-..+..... ....-+++.++ |+.+ ..+.+||+.+.. ..............+....
T Consensus 69 ~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~ 148 (315)
T 4asc_A 69 FLQFDHLDSEWLGMPPLPSPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLSHM 148 (315)
T ss_dssp EEEEETTTTEEEECCCBSSCEESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEET
T ss_pred eEEecCCCCeEEECCCCCcchhceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEEEC
Confidence 77888888765432222222221 12222455544 4421 368999998764 1111111111111122344
Q ss_pred CCeEEEecC-C-----CcEEEEEcCCcc--eeeeccccCCceeEEEeCCCCeEEEEeCCC-----cEEEEeCCCCceEEE
Q 022324 203 DPEAVVGCE-D-----GTARVFDMYSRK--CSQIIRMHCAPVTSLSLSEDQLIISGSSLG-----SIAISGLSSDQRVAT 269 (299)
Q Consensus 203 ~~~l~s~~~-d-----~~i~iwd~~~~~--~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg-----~i~iwd~~~~~~~~~ 269 (299)
+..++.|+. + ..+.+||+.+.+ .+..+..... -.+++...+++++.|+.++ .+.+||+.+.+-...
T Consensus 149 ~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~-~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~ 227 (315)
T 4asc_A 149 DLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARS-LFGATVHDGRIIVAAGVTDTGLTSSAEVYSITDNKWAPF 227 (315)
T ss_dssp TEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCB-SCEEEEETTEEEEEEEECSSSEEEEEEEEETTTTEEEEE
T ss_pred CEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchh-ceEEEEECCEEEEEeccCCCCccceEEEEECCCCeEEEC
Confidence 444566665 2 458899987653 2222211111 1223333456777777654 488899987643222
Q ss_pred eeccCCCCcEEEEEccCCCCeEEeeec
Q 022324 270 LRSTDCTGHIICLMYPQFLHMLFFLCF 296 (299)
Q Consensus 270 ~~~~~~~~~i~~~~~s~~g~~l~s~s~ 296 (299)
-...........+.+ ++++++.|+.
T Consensus 228 ~~~p~~r~~~~~~~~--~~~l~v~GG~ 252 (315)
T 4asc_A 228 EAFPQERSSLSLVSL--VGTLYAIGGF 252 (315)
T ss_dssp CCCSSCCBSCEEEEE--TTEEEEEEEE
T ss_pred CCCCCcccceeEEEE--CCEEEEECCc
Confidence 111111101122222 6677777764
No 309
>2e31_A FBS1, F-box only protein 2; ubiquitin, SCF, ubiquitin ligase, FBS1; 2.40A {Mus musculus} PDB: 2e32_A
Probab=95.64 E-value=0.0091 Score=47.54 Aligned_cols=52 Identities=19% Similarity=0.383 Sum_probs=47.5
Q ss_pred cchhccCcHHHHHHHhhccCccchh-hHHHhhhhHHHHhhhhhHHHHHHhhhc
Q 022324 21 RATIESLNGDIICMIFSSLGFFDLV-RCSAVCKSWNAIINRCKLLQLLYCKLH 72 (299)
Q Consensus 21 ~~~~~~~~~~~~~~i~~~~~h~~~v-~~~~~~~~~~~l~~~~~~w~~~~~~~~ 72 (299)
...+..||.|++..|+.+++..+++ +|..+|+.|+.|+.+..+|+..+.+..
T Consensus 48 ~~~~~~LP~ell~~Il~~Lp~~~L~~r~~~VCk~Wr~l~~~~~~w~~~~~~~g 100 (297)
T 2e31_A 48 VEYLAELPEPLLLRVLAELPATELVQACRLVCLRWKELVDGAPLWLLKCQQEG 100 (297)
T ss_dssp CCCTTSSCHHHHHHHHHTSCHHHHHHTGGGTCHHHHHHHTSHHHHHHHHHHTT
T ss_pred ccChhhCCHHHHHHHHHcCCHHHHHHHHHHHhHHHHHHhcChHHHHHHhhccC
Confidence 3477889999999999999999999 999999999999999999999887763
No 310
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=95.64 E-value=0.7 Score=37.44 Aligned_cols=50 Identities=14% Similarity=0.123 Sum_probs=39.2
Q ss_pred CCceeEEEeCCC-CeEEEEeCCCcEEEEeCCCCceEEEeeccCCCCcEEEEEc
Q 022324 233 CAPVTSLSLSED-QLIISGSSLGSIAISGLSSDQRVATLRSTDCTGHIICLMY 284 (299)
Q Consensus 233 ~~~i~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~ 284 (299)
.+..-++..++. ..+..-+.-|.|++||+.++.++..-+...+ +|..-+.
T Consensus 259 ~DFPVamqvs~kygviyviTK~G~ihlyDleTgt~i~~nrIS~d--~iF~ta~ 309 (365)
T 2xzh_A 259 NDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGE--TIFVTAP 309 (365)
T ss_dssp TCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSS--CEEEEEE
T ss_pred CCceEEEEecccCCEEEEEeCCcEEEEEEcccCcEEEEeccCCC--ceEEecc
Confidence 455677888877 8888889999999999999999887776666 5544443
No 311
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=95.59 E-value=0.66 Score=36.85 Aligned_cols=143 Identities=12% Similarity=0.037 Sum_probs=71.7
Q ss_pred cCCEEEEEeCCC-----cEEEEecCCceeEEEecCCCcee--EEEEecCCCEEE-EEc-------CCeEEEEecCCcee-
Q 022324 121 KRGLILTGVGDK-----VMRLWSLEGYKCVEEYSLPNAAS--LVDFDFDESKIV-GLI-------GTRICIWRRNGLRS- 184 (299)
Q Consensus 121 ~~~~l~s~~~dg-----~i~iwd~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~-~~~-------d~~i~v~d~~~~~~- 184 (299)
.+.+++.|+.++ .+.+||..+.+....-..+.... .++. .++++++ |+. -..+.+||+.+..-
T Consensus 108 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~ 186 (302)
T 2xn4_A 108 NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGV-VGGLLYAVGGYDVASRQCLSTVECYNATTNEWT 186 (302)
T ss_dssp TTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEECCEETTTTEECCCEEEEETTTTEEE
T ss_pred CCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEE-ECCEEEEEeCCCCCCCccccEEEEEeCCCCcEE
Confidence 333555565543 57788888776544322222221 2222 3555544 433 23588999987751
Q ss_pred eeeccCCccceeeeeccCCCeEEEecCC-----CcEEEEEcCCcce--eeeccccCCceeEEEeCCCCeEEEEeCCC---
Q 022324 185 VFPSREGTFMKGLCMRYFDPEAVVGCED-----GTARVFDMYSRKC--SQIIRMHCAPVTSLSLSEDQLIISGSSLG--- 254 (299)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~l~s~~~d-----~~i~iwd~~~~~~--~~~~~~~~~~i~~~~~~~~~~l~~~~~dg--- 254 (299)
.............+...++..++.|+.+ ..+.+||+.+.+= +..+..... -.+++...+++++.|+.++
T Consensus 187 ~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~-~~~~~~~~~~i~v~GG~~~~~~ 265 (302)
T 2xn4_A 187 YIAEMSTRRSGAGVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRR-NAGVCAVNGLLYVVGGDDGSCN 265 (302)
T ss_dssp EECCCSSCCBSCEEEEETTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCB-SCEEEEETTEEEEECCBCSSSB
T ss_pred ECCCCccccccccEEEECCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccc-cCeEEEECCEEEEECCcCCCcc
Confidence 1111111111111223344446666654 3688999886532 222211111 1223333446777777653
Q ss_pred --cEEEEeCCCCc
Q 022324 255 --SIAISGLSSDQ 265 (299)
Q Consensus 255 --~i~iwd~~~~~ 265 (299)
.+.+||+.+.+
T Consensus 266 ~~~v~~yd~~~~~ 278 (302)
T 2xn4_A 266 LASVEYYNPTTDK 278 (302)
T ss_dssp CCCEEEEETTTTE
T ss_pred cccEEEEcCCCCe
Confidence 48899987764
No 312
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=95.54 E-value=1 Score=38.78 Aligned_cols=144 Identities=10% Similarity=0.071 Sum_probs=84.9
Q ss_pred eEEEe-c-CC-EEEEE-eCCCcEEEEecCCceeEEEecCCC----ceeEEEE-------ecCCCEEE-EEcCC-------
Q 022324 116 DQCRM-K-RG-LILTG-VGDKVMRLWSLEGYKCVEEYSLPN----AASLVDF-------DFDESKIV-GLIGT------- 172 (299)
Q Consensus 116 ~~~~~-~-~~-~l~s~-~~dg~i~iwd~~~~~~~~~~~~~~----~~~~~~~-------~~~~~~l~-~~~d~------- 172 (299)
..+++ | ++ .|+.+ ...+.|++.|.+++.......... ....++| +++++.|+ +...+
T Consensus 142 ~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~ 221 (496)
T 3kya_A 142 GRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESP 221 (496)
T ss_dssp EEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEE
T ss_pred CEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccCc
Confidence 45677 3 23 44444 444678889988877665544321 3455999 99998665 54433
Q ss_pred eEEEEecCC-cee-------eeeccCCccceeeeeccCCCe-EEEecCCCcEEEEEcC-------Ccce-----------
Q 022324 173 RICIWRRNG-LRS-------VFPSREGTFMKGLCMRYFDPE-AVVGCEDGTARVFDMY-------SRKC----------- 225 (299)
Q Consensus 173 ~i~v~d~~~-~~~-------~~~~~~~~~~~~~~~~~~~~~-l~s~~~d~~i~iwd~~-------~~~~----------- 225 (299)
.|.+++... +.. .+.... + ...+++++.+.. +++-..++.|..+|+. ++..
T Consensus 222 ~V~~i~r~~~G~~~~~~~~~~v~~~~-~-p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~ 299 (496)
T 3kya_A 222 SVYIIKRNADGTFDDRSDIQLIAAYK-Q-CNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNT 299 (496)
T ss_dssp EEEEEECCTTSCCSTTSCEEEEEEES-C-CCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTT
T ss_pred eEEEEecCCCCceeecccceeeccCC-C-ceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccc
Confidence 366776433 111 111111 1 123577786555 4456677889999987 4443
Q ss_pred eee-cc-ccCCceeEEEeCCC-Ce-EEEEeCCCcEEEEeC
Q 022324 226 SQI-IR-MHCAPVTSLSLSED-QL-IISGSSLGSIAISGL 261 (299)
Q Consensus 226 ~~~-~~-~~~~~i~~~~~~~~-~~-l~~~~~dg~i~iwd~ 261 (299)
... +. ........|+++|+ ++ +++=+....|+.++.
T Consensus 300 ~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~ 339 (496)
T 3kya_A 300 FKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDY 339 (496)
T ss_dssp EEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred cceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEec
Confidence 111 11 22345679999999 74 555566788888664
No 313
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=95.30 E-value=1.7 Score=39.69 Aligned_cols=174 Identities=13% Similarity=0.071 Sum_probs=93.9
Q ss_pred cCeeEEEe-cCCEEEEEeCCCcEEEEecCCceeEEEec-CCCceeEEEEecCCCEEEEEcCCeEEEEecCCceee-eecc
Q 022324 113 VGVDQCRM-KRGLILTGVGDKVMRLWSLEGYKCVEEYS-LPNAASLVDFDFDESKIVGLIGTRICIWRRNGLRSV-FPSR 189 (299)
Q Consensus 113 ~~i~~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~d~~i~v~d~~~~~~~-~~~~ 189 (299)
..|.++.. .++.|..|+.+| +..+|..+.+...... ....+..+.. .++.+.+++.+ .+..||..+.... +...
T Consensus 63 ~~i~~i~~d~~g~lWigT~~G-l~~yd~~~~~f~~~~~~~~~~i~~i~~-~~g~lWigt~~-Gl~~~~~~~~~~~~~~~~ 139 (758)
T 3ott_A 63 TRIYCGVIIDNTYLYMGTDNG-ILVYNYRADRYEQPETDFPTDVRTMAL-QGDTLWLGALN-GLYTYQLQSRKLTSFDTR 139 (758)
T ss_dssp SCEEEEEEETTTEEEEEETTE-EEEEETTTTEECCCSCCCCSCEEEEEE-ETTEEEEEETT-EEEEEETTTCCEEEECHH
T ss_pred ceEEEEEEcCCCcEEEEeCCC-eEEEeCCCCEEECcccCCCceEEEEEe-cCCcEEEEcCC-cceeEeCCCCeEEEeccC
Confidence 45777766 556777777765 6789988765432111 1112333433 45544446665 7888998765422 2110
Q ss_pred --CCccceeeeeccC-CCeEEEecCCCcEEEEEcCCcceeee-ccc----cCCceeEEEeCCC-CeEEEEeCCCcEEEEe
Q 022324 190 --EGTFMKGLCMRYF-DPEAVVGCEDGTARVFDMYSRKCSQI-IRM----HCAPVTSLSLSED-QLIISGSSLGSIAISG 260 (299)
Q Consensus 190 --~~~~~~~~~~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~-~~~----~~~~i~~~~~~~~-~~l~~~~~dg~i~iwd 260 (299)
.-....+.++..+ ...+..|..+ -+..+|..+++.... ... ....|.++...++ ..|..|+. +-|..+|
T Consensus 140 ~~~l~~~~i~~i~~d~~g~lWigt~~-Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~ 217 (758)
T 3ott_A 140 RNGLPNNTIYSIIRTKDNQIYVGTYN-GLCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYF 217 (758)
T ss_dssp HHCCSCSCEEEEEECTTCCEEEEETT-EEEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EEEEEEE
T ss_pred CCCcCCCeEEEEEEcCCCCEEEEeCC-CHhhCccCCCceEEecCCCccccccceeEEEEEECCCCEEEEEEC-CCCeEEc
Confidence 0011123344333 3335556554 477888776543221 111 1234788877765 54455554 4588899
Q ss_pred CCCCceEEEeeccCCCCcEEEEEccCCCCeEEe
Q 022324 261 LSSDQRVATLRSTDCTGHIICLMYPQFLHMLFF 293 (299)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~s 293 (299)
..+++.......... .|.++...++|.+.+.
T Consensus 218 ~~~~~~~~~~~l~~~--~i~~i~~d~~g~lWig 248 (758)
T 3ott_A 218 PSTGQIKQTEAFHNN--SIKSLALDGNGDLLAG 248 (758)
T ss_dssp TTTTEEEEEEEEEEE--EEEEEEECTTCCEEEE
T ss_pred CCCCeEEeccCCCCC--eEEEEEEcCCCCEEEE
Confidence 876653221111222 6888888888876654
No 314
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=95.23 E-value=1.1 Score=43.13 Aligned_cols=154 Identities=10% Similarity=0.133 Sum_probs=86.6
Q ss_pred CcEEEEecCCceeEEEecCCCce--eEEE---EecC-CCEEE-EE----------cCCeEEEEecCCceeee---eccCC
Q 022324 132 KVMRLWSLEGYKCVEEYSLPNAA--SLVD---FDFD-ESKIV-GL----------IGTRICIWRRNGLRSVF---PSREG 191 (299)
Q Consensus 132 g~i~iwd~~~~~~~~~~~~~~~~--~~~~---~~~~-~~~l~-~~----------~d~~i~v~d~~~~~~~~---~~~~~ 191 (299)
+.|++.|..+.+.+..++..... .+++ |..+ ..+++ |+ ..|.|++|++.+.+..+ +...+
T Consensus 807 s~i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~lv~~~~v~g 886 (1158)
T 3ei3_A 807 HNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKG 886 (1158)
T ss_dssp EEEEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETTEEEEEEEEEESS
T ss_pred EEEEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEECCEEEEEEEEEcCC
Confidence 46889999888888777755433 3333 2222 35666 65 34789999987543211 12233
Q ss_pred ccceeeeeccCCCeEEEecCCCcEEEEEcCCcceeeeccccCCcee--EEEeCCCCeEEEEeCCCcEEEEeC--CCCceE
Q 022324 192 TFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVT--SLSLSEDQLIISGSSLGSIAISGL--SSDQRV 267 (299)
Q Consensus 192 ~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~--~~~~~~~~~l~~~~~dg~i~iwd~--~~~~~~ 267 (299)
. +.++...+.++++|- ..++++|++...+.+..-..+-..|. .+.. -++++++|..-..+.+... ..++ +
T Consensus 887 ~---v~al~~~~g~Lla~i-g~~l~vy~l~~~~~L~~~~~~~~~i~~~~l~~-~~~~I~vgD~~~Sv~~~~y~~~~~~-L 960 (1158)
T 3ei3_A 887 A---VYSMVEFNGKLLASI-NSTVRLYEWTTEKELRTECNHYNNIMALYLKT-KGDFILVGDLMRSVLLLAYKPMEGN-F 960 (1158)
T ss_dssp C---EEEEEEETTEEEEEE-TTEEEEEEECTTSCEEEEEEECCCSCEEEEEE-ETTEEEEEESSBCEEEEEEETTTTE-E
T ss_pred c---CEEEeeeCCEEEEEc-CCEEEEEECCCCceEEEEeeccccEEEEEEec-cCCEEEEEEhhheEEEEEEEcCCCe-E
Confidence 3 446666666766554 57899999986554431111111132 3333 2368888888777777543 3333 3
Q ss_pred EEeeccCCCCcEEEEEccCCCCeE
Q 022324 268 ATLRSTDCTGHIICLMYPQFLHML 291 (299)
Q Consensus 268 ~~~~~~~~~~~i~~~~~s~~g~~l 291 (299)
..+..+.....++++.|-.++.++
T Consensus 961 ~~~a~D~~~~~vta~~~ld~~t~l 984 (1158)
T 3ei3_A 961 EEIARDFNPNWMSAVEILDDDNFL 984 (1158)
T ss_dssp EEEEECCSCBCEEEEEEEETTEEE
T ss_pred EEEEeecccccEEEEEEEccCcEE
Confidence 333333322267777776554443
No 315
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=95.11 E-value=1.1 Score=36.72 Aligned_cols=160 Identities=6% Similarity=-0.061 Sum_probs=83.8
Q ss_pred CCCcEEEEecCC--ceeEE-EecC--CC----ceeEEEEec--CCC-EEE-EEc---CCeEEEEecCCc--e-eeeeccC
Q 022324 130 GDKVMRLWSLEG--YKCVE-EYSL--PN----AASLVDFDF--DES-KIV-GLI---GTRICIWRRNGL--R-SVFPSRE 190 (299)
Q Consensus 130 ~dg~i~iwd~~~--~~~~~-~~~~--~~----~~~~~~~~~--~~~-~l~-~~~---d~~i~v~d~~~~--~-~~~~~~~ 190 (299)
.+|.|.++|.++ ++... .+.. .. ...-+.+.+ ++. +|+ +.. +.+|.+|++... . .......
T Consensus 81 ~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~ 160 (355)
T 3sre_A 81 KSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIR 160 (355)
T ss_dssp -CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEEC
T ss_pred CCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccc
Confidence 789999999873 23211 2222 11 222266655 454 233 322 457777776543 2 1111111
Q ss_pred C---ccceeeeeccCCCeEEEec-----------------CCCcEEEEEcCCcceeeeccccCCceeEEEeCCC-CeEEE
Q 022324 191 G---TFMKGLCMRYFDPEAVVGC-----------------EDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIIS 249 (299)
Q Consensus 191 ~---~~~~~~~~~~~~~~l~s~~-----------------~d~~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~-~~l~~ 249 (299)
+ ....-+.+.+++...++.. ..|.+..+|. ++. ..+...-...+.++|+|| +.+..
T Consensus 161 g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~--~~~-~~~~~~l~~pNGia~spDg~~lYv 237 (355)
T 3sre_A 161 HKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP--NDV-RVVAEGFDFANGINISPDGKYVYI 237 (355)
T ss_dssp CTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT--TCC-EEEEEEESSEEEEEECTTSSEEEE
T ss_pred cCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC--CeE-EEeecCCcccCcceECCCCCEEEE
Confidence 1 1111234555555444432 1244555554 332 222233345789999999 65554
Q ss_pred E-eCCCcEEEEeCCC-Cce--EEEeeccCCCCcEEEEEccC-CCCeEEeee
Q 022324 250 G-SSLGSIAISGLSS-DQR--VATLRSTDCTGHIICLMYPQ-FLHMLFFLC 295 (299)
Q Consensus 250 ~-~~dg~i~iwd~~~-~~~--~~~~~~~~~~~~i~~~~~s~-~g~~l~s~s 295 (299)
+ +..+.|..|++.. ++. .+.+. ... ..-.+++++ +|.+.+++.
T Consensus 238 adt~~~~I~~~~~~~~g~l~~~~~~~-~~g--~PDGi~vD~e~G~lwva~~ 285 (355)
T 3sre_A 238 AELLAHKIHVYEKHANWTLTPLRVLS-FDT--LVDNISVDPVTGDLWVGCH 285 (355)
T ss_dssp EEGGGTEEEEEEECTTSCEEEEEEEE-CSS--EEEEEEECTTTCCEEEEEE
T ss_pred EeCCCCeEEEEEECCCCcEecCEEEe-CCC--CCceEEEeCCCCcEEEEec
Confidence 4 5678999999863 332 22332 223 688999999 598877664
No 316
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=95.03 E-value=1.1 Score=35.97 Aligned_cols=130 Identities=8% Similarity=0.028 Sum_probs=63.6
Q ss_pred EEEEecCCceeEEEecCCCce--eEEEEecCCCEEE-EEcC-------CeEEEEecCCcee-eeeccCCccceeeeeccC
Q 022324 134 MRLWSLEGYKCVEEYSLPNAA--SLVDFDFDESKIV-GLIG-------TRICIWRRNGLRS-VFPSREGTFMKGLCMRYF 202 (299)
Q Consensus 134 i~iwd~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~-~~~d-------~~i~v~d~~~~~~-~~~~~~~~~~~~~~~~~~ 202 (299)
+.++|..+.+....-..+... ..++. .++++++ |+.+ ..+.+||+.+..- .............+....
T Consensus 80 ~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~ 158 (318)
T 2woz_A 80 FFQLDNVSSEWVGLPPLPSARCLFGLGE-VDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVISHN 158 (318)
T ss_dssp EEEEETTTTEEEECSCBSSCBCSCEEEE-ETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEEET
T ss_pred EEEEeCCCCcEEECCCCCccccccceEE-ECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEEEC
Confidence 778888877654432222211 12222 2555555 5543 3688899887652 111111111111122234
Q ss_pred CCeEEEecC------CCcEEEEEcCCcc--eeeeccccCCceeEEEeCCCCeEEEEeCC-----CcEEEEeCCCCc
Q 022324 203 DPEAVVGCE------DGTARVFDMYSRK--CSQIIRMHCAPVTSLSLSEDQLIISGSSL-----GSIAISGLSSDQ 265 (299)
Q Consensus 203 ~~~l~s~~~------d~~i~iwd~~~~~--~~~~~~~~~~~i~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~ 265 (299)
+..++.|+. -..+.+||+.+.+ .+..+..... -.+++...+++++.|+.+ ..+.+||+.+.+
T Consensus 159 ~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~-~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 233 (318)
T 2woz_A 159 GMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRS-MFGVAIHKGKIVIAGGVTEDGLSASVEAFDLKTNK 233 (318)
T ss_dssp TEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCB-SCEEEEETTEEEEEEEEETTEEEEEEEEEETTTCC
T ss_pred CEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcc-cceEEEECCEEEEEcCcCCCCccceEEEEECCCCe
Confidence 444556653 2358899988653 2222211111 123333345667777643 347789987764
No 317
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=94.99 E-value=1.4 Score=37.20 Aligned_cols=51 Identities=14% Similarity=0.114 Sum_probs=39.6
Q ss_pred CCceeEEEeCCC-CeEEEEeCCCcEEEEeCCCCceEEEeeccCCCCcEEEEEcc
Q 022324 233 CAPVTSLSLSED-QLIISGSSLGSIAISGLSSDQRVATLRSTDCTGHIICLMYP 285 (299)
Q Consensus 233 ~~~i~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s 285 (299)
.+...++..++. ..+..-+.-|.|++||+.++.++..-+...+ +|..-+.+
T Consensus 258 ~DFPvamqvs~kygviyviTK~G~i~lyDleTgt~i~~nrIs~~--~iF~t~~~ 309 (494)
T 1bpo_A 258 NDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGE--TIFVTAPH 309 (494)
T ss_dssp TCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSS--CEEEEEEE
T ss_pred cCceeEEEecccCCEEEEEecCceEEEEecccceeeeeecccCC--ceEEeccc
Confidence 455677888887 8888889999999999999999887776665 55544443
No 318
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=94.90 E-value=1.5 Score=36.92 Aligned_cols=135 Identities=8% Similarity=-0.051 Sum_probs=85.4
Q ss_pred EEEecCCCEEEEEcCCeEEEEecCCce--eeeecc---CCccceeeeeccCCCeEEEecCCCcEEEEEcCCcce------
Q 022324 157 VDFDFDESKIVGLIGTRICIWRRNGLR--SVFPSR---EGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKC------ 225 (299)
Q Consensus 157 ~~~~~~~~~l~~~~d~~i~v~d~~~~~--~~~~~~---~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~------ 225 (299)
.....++..++...++.|+.-++.... +.+... .......+.+++++..|+..+ +..|.|..+..+..
T Consensus 26 ~~~~~n~t~i~~a~~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~ 104 (452)
T 3pbp_A 26 IFSSQNGTRIVFIQDNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDVS 104 (452)
T ss_dssp EEEETTTTEEEEEETTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCHH
T ss_pred EEEEcCCCEEEEEECCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEec-CCeEEEEEecCccccCcccc
Confidence 344567777777777888888877332 222222 111122367889999887765 45788888873221
Q ss_pred ------eeeccc------cCCceeEEEeCCC----CeEEEEeCCCcEEEEeCCCC--ceEEEeeccC-------CCCcEE
Q 022324 226 ------SQIIRM------HCAPVTSLSLSED----QLIISGSSLGSIAISGLSSD--QRVATLRSTD-------CTGHII 280 (299)
Q Consensus 226 ------~~~~~~------~~~~i~~~~~~~~----~~l~~~~~dg~i~iwd~~~~--~~~~~~~~~~-------~~~~i~ 280 (299)
...+.. ...+|..+.|+|- ..|++-..|+.|++||+... ++. .+.... ....|.
T Consensus 105 ~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~ 183 (452)
T 3pbp_A 105 IQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDIT 183 (452)
T ss_dssp HHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEE
T ss_pred cccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEE
Confidence 112221 2467999999984 58999999999999999752 222 222111 002789
Q ss_pred EEEccCCCCeEEe
Q 022324 281 CLMYPQFLHMLFF 293 (299)
Q Consensus 281 ~~~~s~~g~~l~s 293 (299)
+++|.++|-.|..
T Consensus 184 S~~Fg~~~lTLYv 196 (452)
T 3pbp_A 184 DLEFSKDGLTLYC 196 (452)
T ss_dssp EEEECTTSSCEEE
T ss_pred EEEEcCCCcEEEE
Confidence 9999998765555
No 319
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=94.83 E-value=1.4 Score=36.21 Aligned_cols=135 Identities=10% Similarity=-0.044 Sum_probs=65.4
Q ss_pred ceeEEEEecCCCEEEEEcCCeEEEEecCCceeeeec-----cCCccceeeeeccC---CCeEEEecC----C----CcEE
Q 022324 153 AASLVDFDFDESKIVGLIGTRICIWRRNGLRSVFPS-----REGTFMKGLCMRYF---DPEAVVGCE----D----GTAR 216 (299)
Q Consensus 153 ~~~~~~~~~~~~~l~~~~d~~i~v~d~~~~~~~~~~-----~~~~~~~~~~~~~~---~~~l~s~~~----d----~~i~ 216 (299)
....++|.|+++++++..++.|++++.... ..+.. ........+++.++ +..|+.... + +.|.
T Consensus 30 ~P~~ia~~pdG~l~V~e~~g~I~~~d~~G~-~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~ 108 (354)
T 3a9g_A 30 VPWSIAPLGGGRYLVTERPGRLVLISPSGK-KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRVI 108 (354)
T ss_dssp CEEEEEEEETTEEEEEETTTEEEEECSSCE-EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEEE
T ss_pred CCeEEEEcCCCeEEEEeCCCEEEEEeCCCc-eEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEEE
Confidence 445577777777666666677777763322 11110 00011223456655 344443322 2 4566
Q ss_pred EEEcCCc-------cee-eecc-ccCCceeEEEeCCC-CeEEEEeC-------------CCcEEEEeCCCCc--------
Q 022324 217 VFDMYSR-------KCS-QIIR-MHCAPVTSLSLSED-QLIISGSS-------------LGSIAISGLSSDQ-------- 265 (299)
Q Consensus 217 iwd~~~~-------~~~-~~~~-~~~~~i~~~~~~~~-~~l~~~~~-------------dg~i~iwd~~~~~-------- 265 (299)
.|+.... +.+ ..+. ........|+|.|+ .++++.+. .|.|.-++.. ++
T Consensus 109 r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~d-G~~p~~npf~ 187 (354)
T 3a9g_A 109 RGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEE-GRPPADNPFP 187 (354)
T ss_dssp EEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTT-SCCCTTSSST
T ss_pred EEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCC-CCCCCCCCCC
Confidence 6665432 111 1121 11123467899999 66555432 2445555543 22
Q ss_pred --eEEEeeccCCCCcEEEEEccC-CCCeEEe
Q 022324 266 --RVATLRSTDCTGHIICLMYPQ-FLHMLFF 293 (299)
Q Consensus 266 --~~~~~~~~~~~~~i~~~~~s~-~g~~l~s 293 (299)
.+.. .++. ....++|+| +|+++++
T Consensus 188 ~~~i~a-~G~r---np~Gla~d~~~g~l~v~ 214 (354)
T 3a9g_A 188 NSPIWS-YGHR---NPQGIDWHRASGVMVAT 214 (354)
T ss_dssp TCCEEE-ECCS---CCCEEEECTTTCCEEEE
T ss_pred CCcEEE-EccC---CcceEEEeCCCCCEEEE
Confidence 1111 1232 467899999 6665553
No 320
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=94.76 E-value=3.2 Score=40.05 Aligned_cols=136 Identities=10% Similarity=0.109 Sum_probs=84.1
Q ss_pred EEEEEe----------CCCcEEEEecCCcee--EEEecCCCceeEEEEecCCCEEEEEcCCeEEEEecCCceeee-ec-c
Q 022324 124 LILTGV----------GDKVMRLWSLEGYKC--VEEYSLPNAASLVDFDFDESKIVGLIGTRICIWRRNGLRSVF-PS-R 189 (299)
Q Consensus 124 ~l~s~~----------~dg~i~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~~d~~i~v~d~~~~~~~~-~~-~ 189 (299)
+++.|. ..|.|.++++..++. +...+....+.+++-- +| +|+++.+..+++|++...+... .. .
T Consensus 846 ~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~lv~~~~v~g~v~al~~~-~g-~Lla~ig~~l~vy~l~~~~~L~~~~~~ 923 (1158)
T 3ei3_A 846 YFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEF-NG-KLLASINSTVRLYEWTTEKELRTECNH 923 (1158)
T ss_dssp EEEEEEEECCTTCSSCCCEEEEEEEEETTEEEEEEEEEESSCEEEEEEE-TT-EEEEEETTEEEEEEECTTSCEEEEEEE
T ss_pred EEEEEeeecCCCCCCCCceEEEEEEEECCEEEEEEEEEcCCcCEEEeee-CC-EEEEEcCCEEEEEECCCCceEEEEeec
Confidence 788776 357899999875443 3334445555564322 34 6666677999999998654221 11 0
Q ss_pred CCccceeeeeccCCCeEEEecCCCcEEEEEc--CCcceeeecc--ccCCceeEEEeCCCCeEEEEeCCCcEEEEeCCC
Q 022324 190 EGTFMKGLCMRYFDPEAVVGCEDGTARVFDM--YSRKCSQIIR--MHCAPVTSLSLSEDQLIISGSSLGSIAISGLSS 263 (299)
Q Consensus 190 ~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~--~~~~~~~~~~--~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~ 263 (299)
-.... ...+...++.++.|+.-..+.++.. ..++. ..+. .....++++.+-.+..++.+..+|.|.+.....
T Consensus 924 ~~~i~-~~~l~~~~~~I~vgD~~~Sv~~~~y~~~~~~L-~~~a~D~~~~~vta~~~ld~~t~l~aD~~gNl~vl~~~~ 999 (1158)
T 3ei3_A 924 YNNIM-ALYLKTKGDFILVGDLMRSVLLLAYKPMEGNF-EEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDS 999 (1158)
T ss_dssp CCCSC-EEEEEEETTEEEEEESSBCEEEEEEETTTTEE-EEEEECCSCBCEEEEEEEETTEEEEEETTSEEEEEEECT
T ss_pred cccEE-EEEEeccCCEEEEEEhhheEEEEEEEcCCCeE-EEEEeecccccEEEEEEEccCcEEEEcCCCcEEEEecCC
Confidence 11111 2244455778888887777776543 33332 2222 345678888887666788899999999987643
No 321
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=94.75 E-value=1.3 Score=35.72 Aligned_cols=179 Identities=11% Similarity=0.002 Sum_probs=89.3
Q ss_pred cCeeEEEecCCEEEEEeCCCcEEEEecCCceeEEEecC----CCceeEEEEecCCCEEEEEcCCeEEEE-ecCCc-eeee
Q 022324 113 VGVDQCRMKRGLILTGVGDKVMRLWSLEGYKCVEEYSL----PNAASLVDFDFDESKIVGLIGTRICIW-RRNGL-RSVF 186 (299)
Q Consensus 113 ~~i~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~~d~~i~v~-d~~~~-~~~~ 186 (299)
..+..+.+.++.++.++.++.|.. ..+.|+.-..... +.....+.+.+++..++++.++.|+.- |-... +...
T Consensus 80 ~~~~~i~~~~~~~~~~g~~g~i~~-S~DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~g~v~~S~DgG~tW~~~~ 158 (327)
T 2xbg_A 80 YRFNSVSFQGNEGWIVGEPPIMLH-TTDGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMITNVGAIYRTKDSGKNWQALV 158 (327)
T ss_dssp CEEEEEEEETTEEEEEEETTEEEE-ESSTTSSCEECCCCTTCSSCEEEEEEEETTEEEEEETTCCEEEESSTTSSEEEEE
T ss_pred ccEEEEEecCCeEEEEECCCeEEE-ECCCCCCceECccccCCCCCeEEEEEECCCCEEEEeCCccEEEEcCCCCCCEEee
Confidence 357778775564444455665443 2333433222221 223445666666666666666654332 21111 1221
Q ss_pred eccCCccceeeeeccCCCeEEEecCCCcEEEEEc--CCcceeeeccccCCceeEEEeCCCCeEEEEeCCCcEEEEeCCCC
Q 022324 187 PSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDM--YSRKCSQIIRMHCAPVTSLSLSEDQLIISGSSLGSIAISGLSSD 264 (299)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~--~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 264 (299)
....... ..+.+.+.+..++.+...+..+-.|- .+.+.+.. .....+..+.+.++..+..++.+|.+++.+...+
T Consensus 159 ~~~~~~~-~~~~~~~~~~~~~~g~~G~~~~S~d~gG~tW~~~~~--~~~~~~~~~~~~~~g~~~~~~~~G~~~~s~~D~G 235 (327)
T 2xbg_A 159 QEAIGVM-RNLNRSPSGEYVAVSSRGSFYSTWEPGQTAWEPHNR--TTSRRLHNMGFTPDGRLWMIVNGGKIAFSDPDNS 235 (327)
T ss_dssp CSCCCCE-EEEEECTTSCEEEEETTSSEEEEECTTCSSCEEEEC--CSSSCEEEEEECTTSCEEEEETTTEEEEEETTEE
T ss_pred cCCCcce-EEEEEcCCCcEEEEECCCcEEEEeCCCCCceeECCC--CCCCccceeEECCCCCEEEEeCCceEEEecCCCC
Confidence 1222222 23455565555555544333333342 23333321 3345688898888833445566788877653334
Q ss_pred ceEEEeecc--CCCCcEEEEEccCCCCeEEeee
Q 022324 265 QRVATLRST--DCTGHIICLMYPQFLHMLFFLC 295 (299)
Q Consensus 265 ~~~~~~~~~--~~~~~i~~~~~s~~g~~l~s~s 295 (299)
+....+... .....+.++++.+++..++++.
T Consensus 236 ~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~ 268 (327)
T 2xbg_A 236 ENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGG 268 (327)
T ss_dssp EEECCCBCTTSSCCSCEEEEEESSSSCEEEEES
T ss_pred CeeEeccCCcccCCcceEEEEecCCCEEEEEeC
Confidence 443333322 1111588999998888777654
No 322
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=94.65 E-value=1.2 Score=34.69 Aligned_cols=140 Identities=9% Similarity=-0.017 Sum_probs=76.5
Q ss_pred ceeE-EEEecCCCEEE--EEcCCeEEEEecCCce-eeeeccCCccceeeeeccCCCeEEEecCCCcEEEEEcCCcce---
Q 022324 153 AASL-VDFDFDESKIV--GLIGTRICIWRRNGLR-SVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKC--- 225 (299)
Q Consensus 153 ~~~~-~~~~~~~~~l~--~~~d~~i~v~d~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~--- 225 (299)
...+ ++++|++..|+ ...++.|...|..... ..+......-...+++...+.++++.-.++.+.++++.....
T Consensus 27 ~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~~i~~ 106 (255)
T 3qqz_A 27 NNISSLTWSAQSNTLFSTINKPAAIVEMTTNGDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTPNSEVKI 106 (255)
T ss_dssp SCEEEEEEETTTTEEEEEEETTEEEEEEETTCCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEECTTCCEEE
T ss_pred cCcceeEEeCCCCEEEEEECCCCeEEEEeCCCCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcCCCCeeee
Confidence 3455 99999877665 5556788888987332 111111111222345555565555555667888888765432
Q ss_pred eeecc------ccCCceeEEEeCCC-CeEEEEeCCCcEEEEeCC---CCceEEEeec-----cCCCCcEEEEEccCCCCe
Q 022324 226 SQIIR------MHCAPVTSLSLSED-QLIISGSSLGSIAISGLS---SDQRVATLRS-----TDCTGHIICLMYPQFLHM 290 (299)
Q Consensus 226 ~~~~~------~~~~~i~~~~~~~~-~~l~~~~~dg~i~iwd~~---~~~~~~~~~~-----~~~~~~i~~~~~s~~g~~ 290 (299)
+.... ..+...-.++++|. +.|.++.+.....+|.+. ....+..+.. ......+.+++++|....
T Consensus 107 ~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~ 186 (255)
T 3qqz_A 107 LKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKNT 186 (255)
T ss_dssp EEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETTTTE
T ss_pred eeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEEEcCCCCe
Confidence 12221 12344689999998 666666665555555543 1112222211 111115678889885444
Q ss_pred EE
Q 022324 291 LF 292 (299)
Q Consensus 291 l~ 292 (299)
|.
T Consensus 187 ll 188 (255)
T 3qqz_A 187 LL 188 (255)
T ss_dssp EE
T ss_pred EE
Confidence 33
No 323
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=94.56 E-value=0.84 Score=36.53 Aligned_cols=133 Identities=12% Similarity=0.031 Sum_probs=66.5
Q ss_pred CcEEEEecCCceeEEEecCCCceeE-EEEecCCCEEE-EEc-C-----CeEEEEecCCce-eeeeccCCccceeeeeccC
Q 022324 132 KVMRLWSLEGYKCVEEYSLPNAASL-VDFDFDESKIV-GLI-G-----TRICIWRRNGLR-SVFPSREGTFMKGLCMRYF 202 (299)
Q Consensus 132 g~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~-~~~-d-----~~i~v~d~~~~~-~~~~~~~~~~~~~~~~~~~ 202 (299)
..+.+||..+.+....-..+..... .+...++++++ |+. + ..+.+||+.+.. ..............+...+
T Consensus 117 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~ 196 (315)
T 4asc_A 117 DSVMCYDRLSFKWGESDPLPYVVYGHTVLSHMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVHD 196 (315)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEET
T ss_pred ceEEEECCCCCcEeECCCCCCcccceeEEEECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEEC
Confidence 4588899988765432222222221 22234555555 544 2 378999998775 1111111111111123334
Q ss_pred CCeEEEecCCC-----cEEEEEcCCcc--eeeeccccCCceeEEEeCCCCeEEEEeCC--------------CcEEEEeC
Q 022324 203 DPEAVVGCEDG-----TARVFDMYSRK--CSQIIRMHCAPVTSLSLSEDQLIISGSSL--------------GSIAISGL 261 (299)
Q Consensus 203 ~~~l~s~~~d~-----~i~iwd~~~~~--~~~~~~~~~~~i~~~~~~~~~~l~~~~~d--------------g~i~iwd~ 261 (299)
+..++.|+.++ .+.+||+.+.+ .+..+..... -.+++...+++++.|+.+ ..+.+||+
T Consensus 197 ~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~-~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~ 275 (315)
T 4asc_A 197 GRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQERS-SLSLVSLVGTLYAIGGFATLETESGELVPTELNDIWRYNE 275 (315)
T ss_dssp TEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSSCCB-SCEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEET
T ss_pred CEEEEEeccCCCCccceEEEEECCCCeEEECCCCCCccc-ceeEEEECCEEEEECCccccCcCCccccccccCcEEEecC
Confidence 44566666544 47888987653 2222211111 122333345667777653 24678888
Q ss_pred CCCc
Q 022324 262 SSDQ 265 (299)
Q Consensus 262 ~~~~ 265 (299)
.+.+
T Consensus 276 ~~~~ 279 (315)
T 4asc_A 276 EEKK 279 (315)
T ss_dssp TTTE
T ss_pred CCCh
Confidence 7764
No 324
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=94.53 E-value=1.1 Score=36.44 Aligned_cols=121 Identities=11% Similarity=-0.061 Sum_probs=53.2
Q ss_pred CeEEEEecCCcee-eeec-cCCccceeeeeccCCCeEEEecC------CCcEEEEEc--CCc--ceeeeccccCCc-eeE
Q 022324 172 TRICIWRRNGLRS-VFPS-REGTFMKGLCMRYFDPEAVVGCE------DGTARVFDM--YSR--KCSQIIRMHCAP-VTS 238 (299)
Q Consensus 172 ~~i~v~d~~~~~~-~~~~-~~~~~~~~~~~~~~~~~l~s~~~------d~~i~iwd~--~~~--~~~~~~~~~~~~-i~~ 238 (299)
..+.+||+.+..- .... .........+....+..++.|+. ...+..||+ .+. +.+..+...... -.+
T Consensus 168 ~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~~~~ 247 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYAGESPWYGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVAGGF 247 (357)
T ss_dssp CEEEEEETTTTEEEEEEECSSCCCBSCEEEEETTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTCCBSCE
T ss_pred ccEEEEeCCCCcEEECCCCCCCCcccccEEEECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCcccccce
Confidence 5799999987751 1111 11111101122223444555553 345777876 322 222222111111 122
Q ss_pred EEeCCCCeEEEEeCC----------------------CcEEEEeCCCCce--EEEeeccCCCCcEEEEEccCCCCeEEee
Q 022324 239 LSLSEDQLIISGSSL----------------------GSIAISGLSSDQR--VATLRSTDCTGHIICLMYPQFLHMLFFL 294 (299)
Q Consensus 239 ~~~~~~~~l~~~~~d----------------------g~i~iwd~~~~~~--~~~~~~~~~~~~i~~~~~s~~g~~l~s~ 294 (299)
++...+++++.|+.+ ..+.+||+.+.+- +..+..... .-.+ ...++++++.|
T Consensus 248 ~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~--~~~~--~~~~~~i~v~G 323 (357)
T 2uvk_A 248 AGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGRA--YGVS--LPWNNSLLIIG 323 (357)
T ss_dssp EEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSSCCB--SSEE--EEETTEEEEEE
T ss_pred EEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCCCcc--ccee--EEeCCEEEEEe
Confidence 333345677777632 2578899886542 222222211 1122 22477787777
Q ss_pred ec
Q 022324 295 CF 296 (299)
Q Consensus 295 s~ 296 (299)
+.
T Consensus 324 G~ 325 (357)
T 2uvk_A 324 GE 325 (357)
T ss_dssp EE
T ss_pred ee
Confidence 74
No 325
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=94.24 E-value=1.5 Score=34.86 Aligned_cols=140 Identities=7% Similarity=-0.002 Sum_probs=69.7
Q ss_pred EEEEEeCC-----CcEEEEecCCceeEEEecCCCcee--EEEEecCCCEEE-EEcC-----CeEEEEecCCceee-eecc
Q 022324 124 LILTGVGD-----KVMRLWSLEGYKCVEEYSLPNAAS--LVDFDFDESKIV-GLIG-----TRICIWRRNGLRSV-FPSR 189 (299)
Q Consensus 124 ~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~-~~~d-----~~i~v~d~~~~~~~-~~~~ 189 (299)
+++.|+.+ ..+.+||..+.+....-..+.... .++.. ++++++ |+.+ ..+.+||+.+..-. ....
T Consensus 124 iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~ 202 (308)
T 1zgk_A 124 IYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL-NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAM 202 (308)
T ss_dssp EEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE-TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCC
T ss_pred EEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE-CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCC
Confidence 55555533 367888988776544322222211 22222 555555 5443 46899998876511 1111
Q ss_pred CCccceeeeeccCCCeEEEecCC-----CcEEEEEcCCcce--eeeccccCCceeEEEeCCCCeEEEEeCC-----CcEE
Q 022324 190 EGTFMKGLCMRYFDPEAVVGCED-----GTARVFDMYSRKC--SQIIRMHCAPVTSLSLSEDQLIISGSSL-----GSIA 257 (299)
Q Consensus 190 ~~~~~~~~~~~~~~~~l~s~~~d-----~~i~iwd~~~~~~--~~~~~~~~~~i~~~~~~~~~~l~~~~~d-----g~i~ 257 (299)
........+...++..++.|+.+ ..+.+||+.+.+= +..+..... -.+++...+++++.|+.+ ..+.
T Consensus 203 p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~-~~~~~~~~~~i~v~GG~~~~~~~~~v~ 281 (308)
T 1zgk_A 203 NTIRSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRS-ALGITVHQGRIYVLGGYDGHTFLDSVE 281 (308)
T ss_dssp SSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCB-SCEEEEETTEEEEECCBCSSCBCCEEE
T ss_pred CCccccceEEEECCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCcc-ceEEEEECCEEEEEcCcCCCcccceEE
Confidence 11111111222344446666654 4588999886532 222211111 122333345677777754 3577
Q ss_pred EEeCCCCc
Q 022324 258 ISGLSSDQ 265 (299)
Q Consensus 258 iwd~~~~~ 265 (299)
+||+.+.+
T Consensus 282 ~yd~~~~~ 289 (308)
T 1zgk_A 282 CYDPDTDT 289 (308)
T ss_dssp EEETTTTE
T ss_pred EEcCCCCE
Confidence 88887654
No 326
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=94.15 E-value=1.7 Score=34.82 Aligned_cols=145 Identities=12% Similarity=-0.010 Sum_probs=71.2
Q ss_pred cCCEEEEEeCC-------CcEEEEecCCceeEEEecCCCceeE-EEEecCCCEEE-EEc------CCeEEEEecCCce-e
Q 022324 121 KRGLILTGVGD-------KVMRLWSLEGYKCVEEYSLPNAASL-VDFDFDESKIV-GLI------GTRICIWRRNGLR-S 184 (299)
Q Consensus 121 ~~~~l~s~~~d-------g~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~-~~~------d~~i~v~d~~~~~-~ 184 (299)
.+.+++.|+.+ ..+.+||..+.+....-..+..... .+...++++++ |+. -..+.+||+.+.. .
T Consensus 109 ~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~ 188 (318)
T 2woz_A 109 DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVISHNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWK 188 (318)
T ss_dssp TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEEETTEEEEECCEESSSCBCCCEEEEETTTTEEE
T ss_pred CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEEECCEEEEEcCCCCCCCccceEEEEcCCCCEEE
Confidence 33355555543 2578888887765543332322222 22224555555 433 2368999998875 1
Q ss_pred eeeccCCccceeeeeccCCCeEEEecCC-----CcEEEEEcCCcc--eeeeccccCCceeEEEeCCCCeEEEEeCC----
Q 022324 185 VFPSREGTFMKGLCMRYFDPEAVVGCED-----GTARVFDMYSRK--CSQIIRMHCAPVTSLSLSEDQLIISGSSL---- 253 (299)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~l~s~~~d-----~~i~iwd~~~~~--~~~~~~~~~~~i~~~~~~~~~~l~~~~~d---- 253 (299)
.............+...++..++.|+.+ ..+.+||+.+.+ .+..+..... -.+++...+++++.|+.+
T Consensus 189 ~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~-~~~~~~~~~~i~v~GG~~~~~~ 267 (318)
T 2woz_A 189 DLAPMKTPRSMFGVAIHKGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQERS-SISLVSLAGSLYAIGGFAMIQL 267 (318)
T ss_dssp EECCCSSCCBSCEEEEETTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSCCB-SCEEEEETTEEEEECCBCCBC-
T ss_pred ECCCCCCCcccceEEEECCEEEEEcCcCCCCccceEEEEECCCCeEEECCCCCCccc-ceEEEEECCEEEEECCeeccCC
Confidence 1111111111111222344445666543 346788887653 2222211111 123333345667777653
Q ss_pred ----------CcEEEEeCCCCce
Q 022324 254 ----------GSIAISGLSSDQR 266 (299)
Q Consensus 254 ----------g~i~iwd~~~~~~ 266 (299)
..+.+||+.+.+-
T Consensus 268 ~~~~~~~~~~~~v~~yd~~~~~W 290 (318)
T 2woz_A 268 ESKEFAPTEVNDIWKYEDDKKEW 290 (318)
T ss_dssp ---CCBCCBCCCEEEEETTTTEE
T ss_pred CCceeccceeeeEEEEeCCCCEe
Confidence 3578889877653
No 327
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=94.07 E-value=0.12 Score=42.14 Aligned_cols=109 Identities=11% Similarity=0.117 Sum_probs=68.5
Q ss_pred EEEEEcCCeEEEEecCCceeeeeccCCccceeeeec-c---CCCeEEEe--cCCCcEEEEEcCCcceeeeccc----cCC
Q 022324 165 KIVGLIGTRICIWRRNGLRSVFPSREGTFMKGLCMR-Y---FDPEAVVG--CEDGTARVFDMYSRKCSQIIRM----HCA 234 (299)
Q Consensus 165 ~l~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~-~---~~~~l~s~--~~d~~i~iwd~~~~~~~~~~~~----~~~ 234 (299)
.++++.||.|+-+|..+++.............+... + .+..++.+ +.||.+..+|..+|.....+.. ...
T Consensus 13 V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~~S 92 (339)
T 2be1_A 13 LIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVSTS 92 (339)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHTTC
T ss_pred EEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccceecc
Confidence 444999999999999988766554333101111111 1 12234433 6899999999988865544431 112
Q ss_pred ceeE---EEe------CCCCeEEEEeCCCcEEEEeCCCCceEEEeecc
Q 022324 235 PVTS---LSL------SEDQLIISGSSLGSIAISGLSSDQRVATLRST 273 (299)
Q Consensus 235 ~i~~---~~~------~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~ 273 (299)
++.. ..+ +.+..+++|+.+|.+...|+++|+.+.++...
T Consensus 93 P~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~ 140 (339)
T 2be1_A 93 PLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPG 140 (339)
T ss_dssp SEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTT
T ss_pred ccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecC
Confidence 2221 001 12367899999999999999999999988644
No 328
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=93.45 E-value=2.7 Score=34.39 Aligned_cols=29 Identities=17% Similarity=0.287 Sum_probs=21.7
Q ss_pred ceeEEEEecCCC-EEEEEcCCeEEEEecCC
Q 022324 153 AASLVDFDFDES-KIVGLIGTRICIWRRNG 181 (299)
Q Consensus 153 ~~~~~~~~~~~~-~l~~~~d~~i~v~d~~~ 181 (299)
....++|.|+++ ++++...|.|++++..+
T Consensus 19 ~P~~i~~~pdG~~l~V~e~~G~i~~~~~~g 48 (353)
T 2g8s_A 19 HPWALAFLPDNHGMLITLRGGELRHWQAGK 48 (353)
T ss_dssp SEEEEEECSTTCCEEEEETTTEEEEEETTT
T ss_pred CcEEEEEcCCCCEEEEEeCCceEEEEeCCC
Confidence 456688888888 66677788888887543
No 329
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=92.93 E-value=3.2 Score=33.72 Aligned_cols=119 Identities=11% Similarity=0.008 Sum_probs=80.9
Q ss_pred eEEEEecCCceeeeeccCCccceeeeeccCCCeEEEecCCCcEEEEEcCCcceeeeccccCCceeEEEeCCCCeEEEEeC
Q 022324 173 RICIWRRNGLRSVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSEDQLIISGSS 252 (299)
Q Consensus 173 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~ 252 (299)
+|.+.|+.++.......-.... .-++|..+-++.-. ...+.++|+++.+.+..+.-. ..|.-=.|-.++.|+-.+
T Consensus 50 ~VvIiDl~n~~~~~Rrpi~Ads--AIMnP~~~ViALra-g~~LQiFnletK~klks~~~~-e~VvfWkWis~~~L~lVT- 124 (365)
T 2xzh_A 50 QVVIIDMNDPSNPIRRPISADS--AIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMT-DDVTFWKWISLNTVALVT- 124 (365)
T ss_dssp EEEEEETTSTTSCEEEECCCSE--EEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEECS-SCEEEEEECSSSEEEEEE-
T ss_pred EEEEEECCCCCCccccccccce--eeeCCCccEEEEec-CCeEEEechHHhhhhcceecC-CccEEEEecCCCeEEEEc-
Confidence 7888888876544333333322 24677777655444 678999999999888887553 456666666555555555
Q ss_pred CCcEEEEeCCC-CceEEEeeccCC--CCcEEEEEccCCCCeEEeeec
Q 022324 253 LGSIAISGLSS-DQRVATLRSTDC--TGHIICLMYPQFLHMLFFLCF 296 (299)
Q Consensus 253 dg~i~iwd~~~-~~~~~~~~~~~~--~~~i~~~~~s~~g~~l~s~s~ 296 (299)
+..|+-|++.. .++.+.+..|.. ...|..-..+++.++++..+.
T Consensus 125 ~taVyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI 171 (365)
T 2xzh_A 125 DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGI 171 (365)
T ss_dssp SSEEEEEESSTTCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEE
T ss_pred CCcEEEEcccCCCCCceeeecchhcccceEEEEEECCCCCEEEEEeE
Confidence 45699999964 456666665543 237888899999999887765
No 330
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=92.81 E-value=3.4 Score=33.87 Aligned_cols=79 Identities=8% Similarity=0.025 Sum_probs=46.3
Q ss_pred CCcEEEEEcCCcc-e---eeeccc-cCCceeEEEeCCC-CeEEEEeC-----------------CCcEEEEeCCCCceEE
Q 022324 212 DGTARVFDMYSRK-C---SQIIRM-HCAPVTSLSLSED-QLIISGSS-----------------LGSIAISGLSSDQRVA 268 (299)
Q Consensus 212 d~~i~iwd~~~~~-~---~~~~~~-~~~~i~~~~~~~~-~~l~~~~~-----------------dg~i~iwd~~~~~~~~ 268 (299)
+..+.+|++.... . +..+.+ .-...+.+.+.++ .++++... .|.|.-+|. ++. .
T Consensus 138 ~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~--~~~-~ 214 (355)
T 3sre_A 138 SSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP--NDV-R 214 (355)
T ss_dssp CCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT--TCC-E
T ss_pred CCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC--CeE-E
Confidence 4667787765432 1 223322 1235788988888 66666541 245555555 332 2
Q ss_pred EeeccCCCCcEEEEEccCCCCeEEeee
Q 022324 269 TLRSTDCTGHIICLMYPQFLHMLFFLC 295 (299)
Q Consensus 269 ~~~~~~~~~~i~~~~~s~~g~~l~s~s 295 (299)
.+...-. ..+.++|+|||+.|..+.
T Consensus 215 ~~~~~l~--~pNGia~spDg~~lYvad 239 (355)
T 3sre_A 215 VVAEGFD--FANGINISPDGKYVYIAE 239 (355)
T ss_dssp EEEEEES--SEEEEEECTTSSEEEEEE
T ss_pred EeecCCc--ccCcceECCCCCEEEEEe
Confidence 2222222 679999999999887765
No 331
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=92.78 E-value=3.4 Score=33.77 Aligned_cols=140 Identities=11% Similarity=0.100 Sum_probs=83.2
Q ss_pred CCcEEEEec--CCceeEEEecC---C-----CceeEEEE--ecC-CC-EEE-EEcCCeEEEEecCC---c----eeeeec
Q 022324 131 DKVMRLWSL--EGYKCVEEYSL---P-----NAASLVDF--DFD-ES-KIV-GLIGTRICIWRRNG---L----RSVFPS 188 (299)
Q Consensus 131 dg~i~iwd~--~~~~~~~~~~~---~-----~~~~~~~~--~~~-~~-~l~-~~~d~~i~v~d~~~---~----~~~~~~ 188 (299)
+.+|.+|++ .+++ +..+.. + ..+.-+++ ++. +. +++ ...+|.+..|++.. + +.+-..
T Consensus 98 ~n~l~vf~iDp~~~~-l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f 176 (355)
T 3amr_A 98 KNTIEIYAIDGKNGT-LQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAF 176 (355)
T ss_dssp CCEEEEEEECTTTCC-EEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEE
T ss_pred CCeEEEEEECCCCCc-eeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEe
Confidence 578999976 3443 444421 1 22333666 664 44 344 77789999998832 2 111111
Q ss_pred cCCccceeeeeccCCCeEEEecCCCcEEEEEcC-----Ccceeeecc-c-cCCceeEEEeC--CC-C-eEEEEe-CCCcE
Q 022324 189 REGTFMKGLCMRYFDPEAVVGCEDGTARVFDMY-----SRKCSQIIR-M-HCAPVTSLSLS--ED-Q-LIISGS-SLGSI 256 (299)
Q Consensus 189 ~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~-----~~~~~~~~~-~-~~~~i~~~~~~--~~-~-~l~~~~-~dg~i 256 (299)
..+.....+.+.+....|+.+-++..|..+|.+ +++.+..+. . -...+..|++. ++ + +|++++ .+++.
T Consensus 177 ~lgsq~EgcvvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~ 256 (355)
T 3amr_A 177 KMNSQTEGMAADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSY 256 (355)
T ss_dssp ECSSCEEEEEEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEE
T ss_pred cCCCCcceEEEcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEE
Confidence 112222234556667779999998777777755 234554442 1 12357778774 44 4 555555 67899
Q ss_pred EEEeCC-CCceEEEee
Q 022324 257 AISGLS-SDQRVATLR 271 (299)
Q Consensus 257 ~iwd~~-~~~~~~~~~ 271 (299)
.+||.+ +.+.+..+.
T Consensus 257 ~Vydr~~~~~~vg~f~ 272 (355)
T 3amr_A 257 AIYDRQGKNKYVADFR 272 (355)
T ss_dssp EEEESSTTCCEEEEEE
T ss_pred EEEECCCCCcEEEEEE
Confidence 999996 677777775
No 332
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=92.74 E-value=4.4 Score=36.64 Aligned_cols=173 Identities=11% Similarity=0.037 Sum_probs=82.7
Q ss_pred CC-EEEEEeCC------CcEEEEecCCceeEEEecCCCcee--EEEEecCCCEEE-EEcCC--eEEEEecCCceeeeec-
Q 022324 122 RG-LILTGVGD------KVMRLWSLEGYKCVEEYSLPNAAS--LVDFDFDESKIV-GLIGT--RICIWRRNGLRSVFPS- 188 (299)
Q Consensus 122 ~~-~l~s~~~d------g~i~iwd~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~-~~~d~--~i~v~d~~~~~~~~~~- 188 (299)
++ +++.|+.+ ..+.+||..+.+....-..+.+.. .++...++++++ |+.++ .+.+||+.+..-....
T Consensus 451 ~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~ 530 (695)
T 2zwa_A 451 NNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTP 530 (695)
T ss_dssp TTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCC
T ss_pred CCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccC
Confidence 55 55556543 247788888765443322222222 233324666666 55544 7999999887521111
Q ss_pred ----cCCcccee-eeeccC-CCeEEEecC--C-----CcEEEEEcCCcc--------eeeecc-ccCCceeEEEeCCCCe
Q 022324 189 ----REGTFMKG-LCMRYF-DPEAVVGCE--D-----GTARVFDMYSRK--------CSQIIR-MHCAPVTSLSLSEDQL 246 (299)
Q Consensus 189 ----~~~~~~~~-~~~~~~-~~~l~s~~~--d-----~~i~iwd~~~~~--------~~~~~~-~~~~~i~~~~~~~~~~ 246 (299)
........ +.+... +..++.|+. + +.+.+||+.+.+ .+.... ........+.+..+++
T Consensus 531 ~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~i 610 (695)
T 2zwa_A 531 KDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKL 610 (695)
T ss_dssp SSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEE
T ss_pred CCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEE
Confidence 11111111 222333 334566654 2 358899988765 111111 1111122333332567
Q ss_pred EEEEeC--------CCcEEEEeCCCCceEEEeeccCC-------CCcEEEEEccCCCCeEEeee
Q 022324 247 IISGSS--------LGSIAISGLSSDQRVATLRSTDC-------TGHIICLMYPQFLHMLFFLC 295 (299)
Q Consensus 247 l~~~~~--------dg~i~iwd~~~~~~~~~~~~~~~-------~~~i~~~~~s~~g~~l~s~s 295 (299)
++.|+. ...+.+||+.+++-. .+..... ...-.++....+|++++.|+
T Consensus 611 yv~GG~~~~~~~~~~~~v~~yd~~t~~W~-~~~~p~~~~~~~~p~~~gh~~~~~~~g~i~v~GG 673 (695)
T 2zwa_A 611 LIVGGTSPSGLFDRTNSIISLDPLSETLT-SIPISRRIWEDHSLMLAGFSLVSTSMGTIHIIGG 673 (695)
T ss_dssp EEECCBCSSCCCCTTTSEEEEETTTTEEE-ECCCCHHHHHHSCCCCSSCEEECC---CEEEECC
T ss_pred EEECCccCCCCCCCCCeEEEEECCCCeEE-EeeccccccCCCCccceeeeEEEeCCCEEEEEeC
Confidence 777774 346999999876533 2211110 00013344445667777766
No 333
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=92.70 E-value=3.5 Score=33.68 Aligned_cols=58 Identities=14% Similarity=0.020 Sum_probs=36.6
Q ss_pred ceeEEEeCCCCeEEEEeCCCcEEEEeCCCCce------EEEeeccCCCCcEEEEEccCCCCeEEee
Q 022324 235 PVTSLSLSEDQLIISGSSLGSIAISGLSSDQR------VATLRSTDCTGHIICLMYPQFLHMLFFL 294 (299)
Q Consensus 235 ~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~------~~~~~~~~~~~~i~~~~~s~~g~~l~s~ 294 (299)
....++|..+.++++.-..+.|...++..... ...+..... .+..+++.|||.++++.
T Consensus 269 ap~G~~~~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~--rp~~v~~~pdG~lyv~~ 332 (352)
T 2ism_A 269 PPGNLAFFRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETALSGFG--RLREVQVGPDGALYVTT 332 (352)
T ss_dssp CEEEEEEETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEESSC--CEEEEEECTTSCEEEEE
T ss_pred CCcceEEECCEEEEEECCCCEEEEEEECCCCcceeecchheecccCC--CeeEEEECCCCcEEEEE
Confidence 45677775446666666677787777754321 122222223 79999999999876664
No 334
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=92.56 E-value=4.3 Score=34.37 Aligned_cols=120 Identities=11% Similarity=0.001 Sum_probs=79.7
Q ss_pred CeEEEEecCCceeeeeccCCccceeeeeccCCCeEEEecCCCcEEEEEcCCcceeeeccccCCceeEEEeCCCCeEEEEe
Q 022324 172 TRICIWRRNGLRSVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSEDQLIISGS 251 (299)
Q Consensus 172 ~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~ 251 (299)
.+|.+.|+.++.......-.... .-++|..+-++.-. ...+.++|+++.+.+..+.-.. .|.-=.|-.++.|+-.+
T Consensus 48 ~~vvIiDl~~~~~~~rrpi~Ads--AIMnP~~~iiALra-g~~lQiFnle~K~klks~~~~e-~VvfWkWis~~~l~lVT 123 (494)
T 1bpo_A 48 AQVVIIDMNDPSNPIRRPISADS--AIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTD-DVTFWKWISLNTVALVT 123 (494)
T ss_dssp CEEEEEETTSTTSCEEEECCCSE--EEECSSSSCEEEEE-TTEEEEEETTTTEEEEEEECSS-CCCEEEEEETTEEEEEC
T ss_pred CeEEEEECCCCCcceecccccce--eeeCCCCcEEEEec-CCeEEEEchHHhhhhcceecCC-CceEEEecCCCeEEEEc
Confidence 37778888776544333322222 24677776655443 6889999999998888876544 45455555444555554
Q ss_pred CCCcEEEEeCCC-CceEEEeeccCC--CCcEEEEEccCCCCeEEeeec
Q 022324 252 SLGSIAISGLSS-DQRVATLRSTDC--TGHIICLMYPQFLHMLFFLCF 296 (299)
Q Consensus 252 ~dg~i~iwd~~~-~~~~~~~~~~~~--~~~i~~~~~s~~g~~l~s~s~ 296 (299)
+..|+-|++.. ..+++.+..|.. .+.|..-..++++++++..+.
T Consensus 124 -~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI 170 (494)
T 1bpo_A 124 -DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGI 170 (494)
T ss_dssp -SSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEE
T ss_pred -CCeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEee
Confidence 56699999964 356666665543 247888899999999987765
No 335
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=92.55 E-value=6 Score=36.02 Aligned_cols=174 Identities=12% Similarity=0.076 Sum_probs=97.0
Q ss_pred CeeEEEecCCEEEEEeCCCcEEEEecCCceeEEEec-----CCCceeEEEEecCCCEEEEEcCCeEEEEecCCceee-ee
Q 022324 114 GVDQCRMKRGLILTGVGDKVMRLWSLEGYKCVEEYS-----LPNAASLVDFDFDESKIVGLIGTRICIWRRNGLRSV-FP 187 (299)
Q Consensus 114 ~i~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-----~~~~~~~~~~~~~~~~l~~~~d~~i~v~d~~~~~~~-~~ 187 (299)
.|.++...++.|..++.+ -+..+|..+++...... ....+..+....++.+.+++.+ .+..++..+.... +.
T Consensus 104 ~i~~i~~~~g~lWigt~~-Gl~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigt~~-Gl~~~~~~~~~~~~~~ 181 (758)
T 3ott_A 104 DVRTMALQGDTLWLGALN-GLYTYQLQSRKLTSFDTRRNGLPNNTIYSIIRTKDNQIYVGTYN-GLCRYIPSNGKFEGIP 181 (758)
T ss_dssp CEEEEEEETTEEEEEETT-EEEEEETTTCCEEEECHHHHCCSCSCEEEEEECTTCCEEEEETT-EEEEEETTTTEEEEEC
T ss_pred eEEEEEecCCcEEEEcCC-cceeEeCCCCeEEEeccCCCCcCCCeEEEEEEcCCCCEEEEeCC-CHhhCccCCCceEEec
Confidence 466665566666667766 57788887665433211 1223444666777777777654 5778887765422 11
Q ss_pred ccCC---ccceeeeecc--CCCeEEEecCCCcEEEEEcCCcceeeeccccCCceeEEEeCCCCeEEEEeCCCcEEEEeCC
Q 022324 188 SREG---TFMKGLCMRY--FDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSEDQLIISGSSLGSIAISGLS 262 (299)
Q Consensus 188 ~~~~---~~~~~~~~~~--~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~ 262 (299)
.... ....+.++.. .+..|..|.. +-+..+|..+++...........|.++...++..|..|+.+ -|.+++..
T Consensus 182 ~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~~-Gl~~~~~~ 259 (758)
T 3ott_A 182 LPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYFPSTGQIKQTEAFHNNSIKSLALDGNGDLLAGTDN-GLYVYHND 259 (758)
T ss_dssp CCCCTTCSSCCEEEEEEETTTTEEEEEEE-EEEEEEETTTTEEEEEEEEEEEEEEEEEECTTCCEEEEETT-EEEEECCT
T ss_pred CCCccccccceeEEEEEECCCCEEEEEEC-CCCeEEcCCCCeEEeccCCCCCeEEEEEEcCCCCEEEEeCC-ceeEEecC
Confidence 1111 0111333333 3444555654 45888898766543221122345888887766445556654 58889987
Q ss_pred CCceEEEeeccC------CCCcEEEEEccCCCCeEE
Q 022324 263 SDQRVATLRSTD------CTGHIICLMYPQFLHMLF 292 (299)
Q Consensus 263 ~~~~~~~~~~~~------~~~~i~~~~~s~~g~~l~ 292 (299)
+++. ..+.... ....|.++..+.+|.+-+
T Consensus 260 ~~~~-~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWi 294 (758)
T 3ott_A 260 TTPL-QHIIHDSRNIQSLTNNIIWNIFADQEHNIWL 294 (758)
T ss_dssp TSCC-EEECCCTTCTTSCSCSCEEEEEECTTCCEEE
T ss_pred CCcE-EEEEcCCCCcCcCCcCeEEEEEEcCCCCEEE
Confidence 6543 2232110 012689998888776544
No 336
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=91.64 E-value=3.5 Score=31.33 Aligned_cols=166 Identities=7% Similarity=-0.130 Sum_probs=84.4
Q ss_pred EEEEEeCCCcEEEEecCCce------eEEEecC--CCceeEEEEecCCCEEEEEcCCeEEEEecCCce-eeeeccC----
Q 022324 124 LILTGVGDKVMRLWSLEGYK------CVEEYSL--PNAASLVDFDFDESKIVGLIGTRICIWRRNGLR-SVFPSRE---- 190 (299)
Q Consensus 124 ~l~s~~~dg~i~iwd~~~~~------~~~~~~~--~~~~~~~~~~~~~~~l~~~~d~~i~v~d~~~~~-~~~~~~~---- 190 (299)
+|+....| +++.=....+. ....+-. =.....++|+|++.+.+. .+|.++-.+..+.. ..+....
T Consensus 6 ~l~~v~~d-~~y~G~~P~~~~~~~~~~a~~iG~~gw~~~~~laf~P~G~LYaV-~~G~Ly~~~~~t~~~~~W~~s~t~IG 83 (236)
T 1tl2_A 6 MLRGVYQD-KFYQGTYPQNKNDNWLARATLIGKGGWSNFKFLFLSPGGELYGV-LNDKIYKGTPPTHDNDNWMGRAKKIG 83 (236)
T ss_dssp CEEEEETT-EEEEESCCCSTTCCHHHHSEEEESSSCTTCSEEEECTTSCEEEE-ETTEEEEESCCCSTTCCHHHHCEEEE
T ss_pred EEEEEeCC-cEEecCCCCCcccchhhhccccCccccccceeEEECCCccEEEE-eCCeEEEECCCCCCcccccccccEec
Confidence 56666666 55554443332 1111211 124446999998886557 88888877765421 1111100
Q ss_pred --Cc-cceeeeeccCCCeEEEecCCCcEEEEEcCCcceee------ec-cccCCceeEEEeCCCCeEEEEeCCCcEEEEe
Q 022324 191 --GT-FMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQ------II-RMHCAPVTSLSLSEDQLIISGSSLGSIAISG 260 (299)
Q Consensus 191 --~~-~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~------~~-~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd 260 (299)
+- .-..+.+.+++...++ .||.|.-++..+...-. .+ ...-..+..|.+.|+..|.+.. |+.++-+.
T Consensus 84 ~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~-dg~lyr~~ 160 (236)
T 1tl2_A 84 NGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH-GQQFYKAL 160 (236)
T ss_dssp CSCGGGCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE-TTEEEEEC
T ss_pred ccccccceEEEECCCCCEEEe--CCCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe-CCcEEecC
Confidence 10 0123455555555444 56999888765422111 00 1112457899999994344444 88765444
Q ss_pred CCCCce-----EEEeeccCCCCcEEEEEccCCCCeEEee
Q 022324 261 LSSDQR-----VATLRSTDCTGHIICLMYPQFLHMLFFL 294 (299)
Q Consensus 261 ~~~~~~-----~~~~~~~~~~~~i~~~~~s~~g~~l~s~ 294 (299)
..++.. ..+.-+..+...-+.+.|.++|.+.++.
T Consensus 161 ~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~G~l~~v~ 199 (236)
T 1tl2_A 161 PPVSNQDNWLARATKIGQGGWDTFKFLFFSSVGTLFGVQ 199 (236)
T ss_dssp CCSSTTCCHHHHCEEEESSSGGGEEEEEECTTSCEEEEE
T ss_pred CCCCCCcccccccceeccCCcceEEEEEECCCCcEEEEe
Confidence 443221 1111121111144557788888776654
No 337
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=91.45 E-value=6.3 Score=38.74 Aligned_cols=162 Identities=10% Similarity=0.123 Sum_probs=91.7
Q ss_pred cCeeEEEe-cCCEEEEEeCCCcEEEEecCC-ceeEEEecCC-----CceeEEEEecCCCEEE--EE------cCCeEEEE
Q 022324 113 VGVDQCRM-KRGLILTGVGDKVMRLWSLEG-YKCVEEYSLP-----NAASLVDFDFDESKIV--GL------IGTRICIW 177 (299)
Q Consensus 113 ~~i~~~~~-~~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~-----~~~~~~~~~~~~~~l~--~~------~d~~i~v~ 177 (299)
.+|.-..| ++..|+-.+ +..|.-|++.. ..++..+..| ..++....+++.++++ |- ..|.+.+|
T Consensus 106 e~VvfWkWis~~~l~lVT-~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLy 184 (1630)
T 1xi4_A 106 DDVTFWKWISLNTVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLY 184 (1630)
T ss_pred CCceEEEecCCCeeEEEc-CCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeee
Confidence 45555556 444443333 35789999963 3444444432 3455577888888866 32 24788899
Q ss_pred ecCCce-eeeeccCCcccee-eeeccCCCeEEE-e---cCCCcEEEEEcCCc---c------eeeecc---ccCCceeEE
Q 022324 178 RRNGLR-SVFPSREGTFMKG-LCMRYFDPEAVV-G---CEDGTARVFDMYSR---K------CSQIIR---MHCAPVTSL 239 (299)
Q Consensus 178 d~~~~~-~~~~~~~~~~~~~-~~~~~~~~~l~s-~---~~d~~i~iwd~~~~---~------~~~~~~---~~~~~i~~~ 239 (299)
..+... ..+.+|.+..... +.-.+....+++ + ...++++|-++... . .+..+. ...+...++
T Consensus 185 S~er~~sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~ 264 (1630)
T 1xi4_A 185 SVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAM 264 (1630)
T ss_pred ecccccchhhhHhHhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEE
Confidence 887653 3334433322110 000111111221 1 12368888887542 1 111111 124556678
Q ss_pred EeCCC-CeEEEEeCCCcEEEEeCCCCceEEEeeccCC
Q 022324 240 SLSED-QLIISGSSLGSIAISGLSSDQRVATLRSTDC 275 (299)
Q Consensus 240 ~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~ 275 (299)
..++. ..+..-+.-|.|.++|+.++.++..-+....
T Consensus 265 ~vs~k~g~iy~itk~G~~~~~d~~t~~~i~~~ris~~ 301 (1630)
T 1xi4_A 265 QISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGE 301 (1630)
T ss_pred EeccccCEEEEEecCceEEEEecccchhhhhccccCC
Confidence 88887 8888889999999999999988765554444
No 338
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=91.07 E-value=3.1 Score=36.40 Aligned_cols=100 Identities=7% Similarity=-0.167 Sum_probs=67.3
Q ss_pred eeeeccCCCeEE-EecCCCcEEEEEcCCc------ce-------eeeccccCCceeEEEeCCC-CeEEEEeCCCcEEEEe
Q 022324 196 GLCMRYFDPEAV-VGCEDGTARVFDMYSR------KC-------SQIIRMHCAPVTSLSLSED-QLIISGSSLGSIAISG 260 (299)
Q Consensus 196 ~~~~~~~~~~l~-s~~~d~~i~iwd~~~~------~~-------~~~~~~~~~~i~~~~~~~~-~~l~~~~~dg~i~iwd 260 (299)
.+.++|++.+++ +|--+.++.++|.+.- +. ..+... .-.....+|.++ .-..+---|..|.-|+
T Consensus 327 Gv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~-GlGPlHt~Fd~~G~aYTtlfidSqvvkWn 405 (638)
T 3sbq_A 327 GCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPEL-GLGPLHTTFDGRGNAYTTLFIDSQVVKWN 405 (638)
T ss_dssp CEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBC-CSCEEEEEECSSSEEEEEETTTTEEEEEE
T ss_pred ceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccC-CCcccEEEECCCCceEeeeeecceEEEEe
Confidence 457889999954 5556889999998742 11 222222 334677889887 5556666899999999
Q ss_pred CCCC----------ceEEEeeccCCCCcEEEE-----EccCCCCeEEeeeccc
Q 022324 261 LSSD----------QRVATLRSTDCTGHIICL-----MYPQFLHMLFFLCFLP 298 (299)
Q Consensus 261 ~~~~----------~~~~~~~~~~~~~~i~~~-----~~s~~g~~l~s~s~~~ 298 (299)
+... ..+..+..|.. +-.-. .-.|+|++|++..-++
T Consensus 406 i~~a~~~~~g~~~~~v~~k~dv~Yq--pGH~~~~~get~~~dGk~lv~lnK~s 456 (638)
T 3sbq_A 406 MEEAVRAYKGEKVNYIKQKLDVHYQ--PGHLHASLCETNEADGKWLVALSKFS 456 (638)
T ss_dssp HHHHHHHHTTCCCCCEEEEEECSSC--EEEEEETTTTSTTCCSCEEEEEESCC
T ss_pred ccHHHHHhcCccCCeeeeccccccC--CcccccCCCccCCCCccEEEEecccc
Confidence 8653 46677777764 22222 2468999999987653
No 339
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=89.69 E-value=8.7 Score=32.66 Aligned_cols=31 Identities=13% Similarity=-0.031 Sum_probs=21.9
Q ss_pred CceeEEEEecCCCEEEEEcCC-eEEEEecCCc
Q 022324 152 NAASLVDFDFDESKIVGLIGT-RICIWRRNGL 182 (299)
Q Consensus 152 ~~~~~~~~~~~~~~l~~~~d~-~i~v~d~~~~ 182 (299)
.....++|.|+++++++...+ .|++++..++
T Consensus 27 ~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g 58 (454)
T 1cru_A 27 NKPHALLWGPDNQIWLTERATGKILRVNPESG 58 (454)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTC
T ss_pred CCceEEEEcCCCcEEEEEcCCCEEEEEECCCC
Confidence 345668888888877777665 6888776433
No 340
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=87.64 E-value=9.9 Score=30.73 Aligned_cols=49 Identities=6% Similarity=-0.047 Sum_probs=26.0
Q ss_pred CcEEEEEcCCcc--eeeeccccCCceeEEEeCCCCeEEEEeC------CCcEEEEeC
Q 022324 213 GTARVFDMYSRK--CSQIIRMHCAPVTSLSLSEDQLIISGSS------LGSIAISGL 261 (299)
Q Consensus 213 ~~i~iwd~~~~~--~~~~~~~~~~~i~~~~~~~~~~l~~~~~------dg~i~iwd~ 261 (299)
..+.+||+.+.+ .+..+......-.+++...+++++.|+. ...+.+||+
T Consensus 168 ~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~ 224 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYAGESPWYGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDF 224 (357)
T ss_dssp CEEEEEETTTTEEEEEEECSSCCCBSCEEEEETTEEEEECCEEETTEECCCEEEEEC
T ss_pred ccEEEEeCCCCcEEECCCCCCCCcccccEEEECCEEEEEeeecCCCcccCceEEEEe
Confidence 568899987643 3333321111113344445566677664 345777876
No 341
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=87.41 E-value=5 Score=35.13 Aligned_cols=119 Identities=12% Similarity=0.017 Sum_probs=69.5
Q ss_pred EEEEecCC----c-eeEEEecCCCceeEEEEecCCCEEE--EEcCCeEEEEecCCcee-------------eeeccCCcc
Q 022324 134 MRLWSLEG----Y-KCVEEYSLPNAASLVDFDFDESKIV--GLIGTRICIWRRNGLRS-------------VFPSREGTF 193 (299)
Q Consensus 134 i~iwd~~~----~-~~~~~~~~~~~~~~~~~~~~~~~l~--~~~d~~i~v~d~~~~~~-------------~~~~~~~~~ 193 (299)
+.+.|... + ..+..+..+..+.-+.++|||++++ +-.+.++.++|++.-.. ..+...+-.
T Consensus 300 v~ViD~~~~~~~~~~~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlG 379 (638)
T 3sbq_A 300 TPVLDGRKKDGKDSKFTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLG 379 (638)
T ss_dssp CCEEECSCBTTBCCSSEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSC
T ss_pred eeEEccccccccCCceEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCc
Confidence 55666554 2 2344455556666689999999988 44477999999985321 111112222
Q ss_pred ceeeeeccCCCeEEEecCCCcEEEEEcCCc----------ceeeeccccCCceeEEE-----eCCC-CeEEEEeC
Q 022324 194 MKGLCMRYFDPEAVVGCEDGTARVFDMYSR----------KCSQIIRMHCAPVTSLS-----LSED-QLIISGSS 252 (299)
Q Consensus 194 ~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~----------~~~~~~~~~~~~i~~~~-----~~~~-~~l~~~~~ 252 (299)
..-++|...+.-..+-.-|..|..|++... ..+..+..|-++-.-.+ -.++ ++|++...
T Consensus 380 PlHt~Fd~~G~aYTtlfidSqvvkWni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~lnK 454 (638)
T 3sbq_A 380 PLHTTFDGRGNAYTTLFIDSQVVKWNMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVALSK 454 (638)
T ss_dssp EEEEEECSSSEEEEEETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEEES
T ss_pred ccEEEECCCCceEeeeeecceEEEEeccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEecc
Confidence 223466666633566778999999998753 34555554444322221 1245 67777643
No 342
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=84.53 E-value=15 Score=29.93 Aligned_cols=139 Identities=9% Similarity=-0.066 Sum_probs=69.8
Q ss_pred CCceeEEEEecCCCEEEEEc-CCeEEEEecCCcee-eeecc------CCccceeeeeccC---CCeEEEe---cCCCcEE
Q 022324 151 PNAASLVDFDFDESKIVGLI-GTRICIWRRNGLRS-VFPSR------EGTFMKGLCMRYF---DPEAVVG---CEDGTAR 216 (299)
Q Consensus 151 ~~~~~~~~~~~~~~~l~~~~-d~~i~v~d~~~~~~-~~~~~------~~~~~~~~~~~~~---~~~l~s~---~~d~~i~ 216 (299)
-.....++|.|+++++++.. .|.|++++..++.. .+... .......++++|+ +..|+.. ..++.|.
T Consensus 31 L~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~ 110 (347)
T 3das_A 31 LNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIV 110 (347)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEE
T ss_pred CCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEE
Confidence 34556688888888777666 78888887654321 11100 0111123566653 3333332 2345565
Q ss_pred EEEcCCc----------cee-eecc-ccCCceeEEEeCCC-CeEEEEeC-------------CCcEEEEeCCCCc-----
Q 022324 217 VFDMYSR----------KCS-QIIR-MHCAPVTSLSLSED-QLIISGSS-------------LGSIAISGLSSDQ----- 265 (299)
Q Consensus 217 iwd~~~~----------~~~-~~~~-~~~~~i~~~~~~~~-~~l~~~~~-------------dg~i~iwd~~~~~----- 265 (299)
-|....+ +.+ ..+. ........|+|.|| .++++.+. .|.|.=.+.. ++
T Consensus 111 R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~d-G~ip~~n 189 (347)
T 3das_A 111 RMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPD-GEPAPGN 189 (347)
T ss_dssp EEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTT-SSBCTTC
T ss_pred EEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCC-CCccCCC
Confidence 5655431 111 1121 11223467899998 66666442 2444444443 22
Q ss_pred ---eEEEee-ccCCCCcEEEEEccCCCCeEEe
Q 022324 266 ---RVATLR-STDCTGHIICLMYPQFLHMLFF 293 (299)
Q Consensus 266 ---~~~~~~-~~~~~~~i~~~~~s~~g~~l~s 293 (299)
....+. ++. ....++|+|+|.+.++
T Consensus 190 Pf~~~~i~a~G~R---Np~Gla~dp~G~L~~~ 218 (347)
T 3das_A 190 PFPGSPVYSYGHR---NVQGLAWDDKQRLFAS 218 (347)
T ss_dssp SSTTCCEEEBCCS---BCCEEEECTTCCEEEE
T ss_pred CCCCCeEEeeCCC---CcceEEECCCCCEEEE
Confidence 001111 232 4678999998876654
No 343
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=83.94 E-value=12 Score=28.40 Aligned_cols=66 Identities=6% Similarity=-0.145 Sum_probs=40.9
Q ss_pred CeeEEEe-cCCEEEEEeCCCcEEEEecCCcee------EEEec--CCCceeEEEEecCCCEEEEEcCCeEEEEecCC
Q 022324 114 GVDQCRM-KRGLILTGVGDKVMRLWSLEGYKC------VEEYS--LPNAASLVDFDFDESKIVGLIGTRICIWRRNG 181 (299)
Q Consensus 114 ~i~~~~~-~~~~l~s~~~dg~i~iwd~~~~~~------~~~~~--~~~~~~~~~~~~~~~~l~~~~d~~i~v~d~~~ 181 (299)
.+..++| |++.|... .+|.+.-.+..+.+. -..+- +-+.-..+.|.+++.+.++ .||.|+-++..+
T Consensus 42 ~~~~laf~P~G~LYaV-~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav-~dG~iyr~~pP~ 116 (236)
T 1tl2_A 42 NFKFLFLSPGGELYGV-LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV-SKDKLYKASPPQ 116 (236)
T ss_dssp TCSEEEECTTSCEEEE-ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE-ETTEEEEESCCC
T ss_pred cceeEEECCCccEEEE-eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe-CCCEEEEeCCCc
Confidence 5668888 66666666 777766666544211 11111 1112245888999987777 779998887643
No 344
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=83.06 E-value=2.5 Score=38.12 Aligned_cols=38 Identities=8% Similarity=0.358 Sum_probs=32.1
Q ss_pred cCeeEEEecCCEEEEEeCCCcEEEEecCCceeEEEecC
Q 022324 113 VGVDQCRMKRGLILTGVGDKVMRLWSLEGYKCVEEYSL 150 (299)
Q Consensus 113 ~~i~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 150 (299)
..|.++.+++.++++-+.|.++|+|++.+++++.+...
T Consensus 222 ~~Is~~~~~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 222 SVISCKLFHERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp CEEEEEEETTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred ceEEEeccCCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 34666666777999999999999999999999887765
No 345
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=81.95 E-value=6.6 Score=34.68 Aligned_cols=59 Identities=8% Similarity=0.041 Sum_probs=41.9
Q ss_pred eeEEEeCCC-CeEEEEeCC------------CcEEEEeCCCCceEEEeeccCCCCcEEEEEccCCCCeEEeee
Q 022324 236 VTSLSLSED-QLIISGSSL------------GSIAISGLSSDQRVATLRSTDCTGHIICLMYPQFLHMLFFLC 295 (299)
Q Consensus 236 i~~~~~~~~-~~l~~~~~d------------g~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~s~s 295 (299)
.-.|+|+|. .++++-..+ ..+.+.+..+++..+-+..+.+. .++.++|+||++.|+..-
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~ga-E~TG~~fspDg~tlfvni 549 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGC-EVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTC-EEEEEEECTTSSEEEEEE
T ss_pred CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCc-cCcCeeECCCCCEEEEEE
Confidence 456889988 655544322 23566677778876666666554 999999999999988753
No 346
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=80.67 E-value=0.43 Score=38.64 Aligned_cols=45 Identities=31% Similarity=0.544 Sum_probs=38.3
Q ss_pred cchhccCcHHHHHHHhhccCccchhhHHHhhhhHHHHhhhhhHHH
Q 022324 21 RATIESLNGDIICMIFSSLGFFDLVRCSAVCKSWNAIINRCKLLQ 65 (299)
Q Consensus 21 ~~~~~~~~~~~~~~i~~~~~h~~~v~~~~~~~~~~~l~~~~~~w~ 65 (299)
...+..+|.|...+|+++++..+.+.+..+|+.|+.++.....|+
T Consensus 6 ~~~~~~LP~eil~~If~~L~~~d~~~~~~vc~~W~~~~~~~~~~~ 50 (336)
T 2ast_B 6 GVSWDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLWQ 50 (336)
T ss_dssp -CCSSSSCHHHHHHHHTTSCHHHHHHTTSSCHHHHHHHTCSTTSS
T ss_pred cCChhhCCHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcCchhhe
Confidence 456788999999999999999999999999999999986444553
No 347
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=79.83 E-value=12 Score=32.91 Aligned_cols=60 Identities=8% Similarity=0.048 Sum_probs=41.4
Q ss_pred ceeEEEeCCC-CeEEEEeC------------CCcEEEEeCCCCceEEEeeccCCCCcEEEEEccCCCCeEEeee
Q 022324 235 PVTSLSLSED-QLIISGSS------------LGSIAISGLSSDQRVATLRSTDCTGHIICLMYPQFLHMLFFLC 295 (299)
Q Consensus 235 ~i~~~~~~~~-~~l~~~~~------------dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~s~s 295 (299)
....|.|.++ .+.++... ...+..++..+++....+...... .++.++|+||++.|+++-
T Consensus 477 sPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~a-EpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGC-EVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTC-EEEEEEECTTSSEEEEEE
T ss_pred CCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCc-cccCCEECCCCCEEEEEE
Confidence 4677899988 65553221 225777787778866555544332 799999999999998764
No 348
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=79.70 E-value=23 Score=28.78 Aligned_cols=96 Identities=11% Similarity=-0.104 Sum_probs=55.3
Q ss_pred cCeeEEEe-cCCEEEEEeCCCcEEEEecCCce-eEEEec----CCCceeEEEEecC---CCEEE-EEc----C----CeE
Q 022324 113 VGVDQCRM-KRGLILTGVGDKVMRLWSLEGYK-CVEEYS----LPNAASLVDFDFD---ESKIV-GLI----G----TRI 174 (299)
Q Consensus 113 ~~i~~~~~-~~~~l~s~~~dg~i~iwd~~~~~-~~~~~~----~~~~~~~~~~~~~---~~~l~-~~~----d----~~i 174 (299)
..-..++| +++.|+.+..+|.|.+++ .+++ .+..+. ......-++++|+ +..|. +.. + ..|
T Consensus 29 ~~P~~ia~~pdG~l~V~e~~g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v 107 (354)
T 3a9g_A 29 EVPWSIAPLGGGRYLVTERPGRLVLIS-PSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRV 107 (354)
T ss_dssp SCEEEEEEEETTEEEEEETTTEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEE
T ss_pred CCCeEEEEcCCCeEEEEeCCCEEEEEe-CCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEE
Confidence 44567777 777777777789999997 4554 222221 2234555999997 44444 433 3 578
Q ss_pred EEEecCCc------e-eeee---ccCCccceeeeeccCCCeEEEe
Q 022324 175 CIWRRNGL------R-SVFP---SREGTFMKGLCMRYFDPEAVVG 209 (299)
Q Consensus 175 ~v~d~~~~------~-~~~~---~~~~~~~~~~~~~~~~~~l~s~ 209 (299)
..|+.... . .++. ....+....+++.+++..+++.
T Consensus 108 ~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~ 152 (354)
T 3a9g_A 108 IRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITT 152 (354)
T ss_dssp EEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEEC
T ss_pred EEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEE
Confidence 88877653 1 1222 1112233346788888655543
No 349
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=79.40 E-value=36 Score=30.73 Aligned_cols=145 Identities=11% Similarity=0.049 Sum_probs=75.2
Q ss_pred cCCEEEEEeCC----CcEEEEecCCceeEEEe-c-----CCCc--eeEEEEec-CCCEEE-EEcC------CeEEEEecC
Q 022324 121 KRGLILTGVGD----KVMRLWSLEGYKCVEEY-S-----LPNA--ASLVDFDF-DESKIV-GLIG------TRICIWRRN 180 (299)
Q Consensus 121 ~~~~l~s~~~d----g~i~iwd~~~~~~~~~~-~-----~~~~--~~~~~~~~-~~~~l~-~~~d------~~i~v~d~~ 180 (299)
.+..++.|+.+ ..+.+||..+++....- . .+.. ...++... +++.++ |+.+ ..+.+||..
T Consensus 397 ~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~ 476 (695)
T 2zwa_A 397 GNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMK 476 (695)
T ss_dssp SSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETT
T ss_pred CCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCC
Confidence 33366666643 46888898877654433 2 1221 12244443 566555 5443 368899998
Q ss_pred Cceee-ee-ccCCccceeeeeccCCCeEEEecCCC--cEEEEEcCCcce--eee---ccccCCceeEEEeCC--CCeEEE
Q 022324 181 GLRSV-FP-SREGTFMKGLCMRYFDPEAVVGCEDG--TARVFDMYSRKC--SQI---IRMHCAPVTSLSLSE--DQLIIS 249 (299)
Q Consensus 181 ~~~~~-~~-~~~~~~~~~~~~~~~~~~l~s~~~d~--~i~iwd~~~~~~--~~~---~~~~~~~i~~~~~~~--~~~l~~ 249 (299)
+..-. .. ..........+....+..++.|+.++ .+.+||+.+.+= +.. ..........+.+.. +++++.
T Consensus 477 t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~ 556 (695)
T 2zwa_A 477 TREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIIL 556 (695)
T ss_dssp TTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEE
T ss_pred CCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEE
Confidence 76411 11 11111111222223556667776544 688999886532 211 111122223344443 356677
Q ss_pred EeC--C-----CcEEEEeCCCCc
Q 022324 250 GSS--L-----GSIAISGLSSDQ 265 (299)
Q Consensus 250 ~~~--d-----g~i~iwd~~~~~ 265 (299)
|+. + ..+.+||+.+.+
T Consensus 557 GG~~~~~~~~~~~v~~yd~~~~~ 579 (695)
T 2zwa_A 557 GGGFMDQTTVSDKAIIFKYDAEN 579 (695)
T ss_dssp CCBCTTSSCBCCEEEEEEECTTC
T ss_pred CCcCCCCCeeeCcEEEEEccCCc
Confidence 765 2 358899998776
No 350
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=78.74 E-value=21 Score=35.37 Aligned_cols=120 Identities=11% Similarity=0.002 Sum_probs=75.1
Q ss_pred eEEEEecCCceeeeeccCCccceeeeeccCCCeEEEecCCCcEEEEEcCCcceeeeccccCCceeEEEeCCCCeEEEEeC
Q 022324 173 RICIWRRNGLRSVFPSREGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSEDQLIISGSS 252 (299)
Q Consensus 173 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~ 252 (299)
+|.|.|+.++..+...+-+.-. .-++|..+-++.-. ...+.|+|+.+.+.+..+.-. .+|.-=.|-..+.|+-.+
T Consensus 49 ~vvIidl~~~~~~~rrpi~Ads--AIMnP~~~iiALra-g~~lQiFnl~~k~klks~~~~-e~VvfWkWis~~~l~lVT- 123 (1630)
T 1xi4_A 49 QVVIIDMNDPSNPIRRPISADS--AIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMT-DDVTFWKWISLNTVALVT- 123 (1630)
T ss_pred eEEEEECCCCCCcccccccchh--hccCCCcceEEEec-CCeEEEeehHHhhhhcccccC-CCceEEEecCCCeeEEEc-
Confidence 6778888776544333222222 24667666555443 678999999988888777543 345555565554454444
Q ss_pred CCcEEEEeCCC-CceEEEeeccCC--CCcEEEEEccCCCCeEEeeecc
Q 022324 253 LGSIAISGLSS-DQRVATLRSTDC--TGHIICLMYPQFLHMLFFLCFL 297 (299)
Q Consensus 253 dg~i~iwd~~~-~~~~~~~~~~~~--~~~i~~~~~s~~g~~l~s~s~~ 297 (299)
+..|+-|++.. ..+++.+..|.. .+.|..-..++++++++..+..
T Consensus 124 ~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~ 171 (1630)
T 1xi4_A 124 DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGIS 171 (1630)
T ss_pred CCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeec
Confidence 45699999963 344444444421 1378888889999998877653
No 351
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=78.65 E-value=3.4 Score=38.93 Aligned_cols=37 Identities=19% Similarity=0.215 Sum_probs=31.4
Q ss_pred ceeEEEeCCC-CeEEEEeCCCcEEEEeCCCCceEEEee
Q 022324 235 PVTSLSLSED-QLIISGSSLGSIAISGLSSDQRVATLR 271 (299)
Q Consensus 235 ~i~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~ 271 (299)
.+.+++..++ .++++-+.|+++|+|++.+++++.+..
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 4566677777 899999999999999999999888764
No 352
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=77.49 E-value=15 Score=34.66 Aligned_cols=36 Identities=14% Similarity=0.166 Sum_probs=28.8
Q ss_pred CeeEEEe-cCC-EEEEEeCCCcEEEEecCCceeEEEec
Q 022324 114 GVDQCRM-KRG-LILTGVGDKVMRLWSLEGYKCVEEYS 149 (299)
Q Consensus 114 ~i~~~~~-~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~ 149 (299)
.|.++.. ++. ++++-+.|+++|+|++.+++++.+..
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 3444444 444 99999999999999999999998765
No 353
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=72.73 E-value=34 Score=27.14 Aligned_cols=124 Identities=9% Similarity=0.056 Sum_probs=67.0
Q ss_pred EEEecCCCEEE-EEcC--------------CeEEEEecCCceeeeeccCCccceeeeeccCCCeEEEec----CCCcEEE
Q 022324 157 VDFDFDESKIV-GLIG--------------TRICIWRRNGLRSVFPSREGTFMKGLCMRYFDPEAVVGC----EDGTARV 217 (299)
Q Consensus 157 ~~~~~~~~~l~-~~~d--------------~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~----~d~~i~i 217 (299)
--+++++..|+ +... ..|+..++.+.....-.. .. ...+++.++.|+-.. .+..|..
T Consensus 58 ~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~l~~-~~---~~~~s~~g~~Iy~~~~~~~~~~~Iy~ 133 (302)
T 3s25_A 58 MYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTVLDP-DP---CIYASLIGNYIYYLHYDTQTATSLYR 133 (302)
T ss_dssp EEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEEEEC-SC---EEEEEEETTEEEEEEESSSSCEEEEE
T ss_pred eeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceEeec-CC---ccEEEEeCCEEEEEeecCCCCceEEE
Confidence 44578888888 4432 367777777664222111 11 225677888866544 3445555
Q ss_pred EEcCCcceeeeccccCCceeEEEeCCC-CeEEEEe-CCCcEEEEeCCCCceEEEeeccCCCCcEEEEEccCCCCeEEeee
Q 022324 218 FDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGS-SLGSIAISGLSSDQRVATLRSTDCTGHIICLMYPQFLHMLFFLC 295 (299)
Q Consensus 218 wd~~~~~~~~~~~~~~~~i~~~~~~~~-~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~s~s 295 (299)
-++. +.....+..+.. ..++++ +.|.-.+ ....|...++..+.....+. + ... ..++|++.+|+-..
T Consensus 134 ~~~d-Gs~~~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~---~--~~~-~~~~P~g~~iy~t~ 202 (302)
T 3s25_A 134 IRID-GEEKKKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQSEALFYD---C--NCY-KPVVLDDTNVYYMD 202 (302)
T ss_dssp EETT-SCCCEEEESSCC----CCSEEETTEEEEECTTTCCEEEEETTTTEEEEEEC---S--CEE-EEEEEETTEEEEEE
T ss_pred EECC-CCCeEEEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCCCCEEEEeC---C--Ccc-ceeeecCCEEEEEE
Confidence 5665 333344433322 345565 5555444 46788888887554332222 1 222 23558888776543
No 354
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=72.43 E-value=40 Score=27.86 Aligned_cols=84 Identities=7% Similarity=0.031 Sum_probs=52.3
Q ss_pred CcEEEEEcCCc--ceeeeccc------cCCceeEEEeC---C-----CCe-EEEEeCCCcEEEEeCCCCceEEEee----
Q 022324 213 GTARVFDMYSR--KCSQIIRM------HCAPVTSLSLS---E-----DQL-IISGSSLGSIAISGLSSDQRVATLR---- 271 (299)
Q Consensus 213 ~~i~iwd~~~~--~~~~~~~~------~~~~i~~~~~~---~-----~~~-l~~~~~dg~i~iwd~~~~~~~~~~~---- 271 (299)
-+|.+||+.+. +.++.+.- ....+..+++. | +.+ .++=+..+.|.|+|+.+++.-+...
T Consensus 123 pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~ 202 (381)
T 3q6k_A 123 PAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFK 202 (381)
T ss_dssp CEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGS
T ss_pred ceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCc
Confidence 45777888887 77766541 23457777777 2 222 3333457789999999887554442
Q ss_pred ccCC------------CCcEEEEEccCC----CCeEEeeec
Q 022324 272 STDC------------TGHIICLMYPQF----LHMLFFLCF 296 (299)
Q Consensus 272 ~~~~------------~~~i~~~~~s~~----g~~l~s~s~ 296 (299)
.... ...|..++++|+ ++.|.-..+
T Consensus 203 pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~pl 243 (381)
T 3q6k_A 203 AERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAG 243 (381)
T ss_dssp CCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEES
T ss_pred cccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEEC
Confidence 1100 016889999998 777765443
No 355
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=71.55 E-value=3.6 Score=39.62 Aligned_cols=36 Identities=19% Similarity=0.220 Sum_probs=29.5
Q ss_pred eeEEEeCCC-CeEEEEeCCCcEEEEeCCCCceEEEee
Q 022324 236 VTSLSLSED-QLIISGSSLGSIAISGLSSDQRVATLR 271 (299)
Q Consensus 236 i~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~ 271 (299)
+.+++..++ .++++-+.|+++|||++.+++++.+..
T Consensus 240 ~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 240 IISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp BSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 344445566 899999999999999999999988764
No 356
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=69.90 E-value=8.4 Score=34.78 Aligned_cols=37 Identities=11% Similarity=0.080 Sum_probs=29.9
Q ss_pred ceeEEEeCCCCeEEEEeCCCcEEEEeCCCCceEEEeec
Q 022324 235 PVTSLSLSEDQLIISGSSLGSIAISGLSSDQRVATLRS 272 (299)
Q Consensus 235 ~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 272 (299)
.|.++.+ ++.++++-+.|.++|+|++.+++++.+..-
T Consensus 223 ~Is~~~~-~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 223 VISCKLF-HERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EEEEEEE-TTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred eEEEecc-CCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 3554444 358999999999999999999998887765
No 357
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=67.42 E-value=49 Score=26.90 Aligned_cols=105 Identities=8% Similarity=-0.134 Sum_probs=57.7
Q ss_pred eEEeeccccCeeEEEe-cCCEEEEEeC-CCcEEEEecCCceeE--EEec-----CCCceeEEEEecC---CCEEE-E-E-
Q 022324 105 IDQWKAHSVGVDQCRM-KRGLILTGVG-DKVMRLWSLEGYKCV--EEYS-----LPNAASLVDFDFD---ESKIV-G-L- 169 (299)
Q Consensus 105 ~~~~~~h~~~i~~~~~-~~~~l~s~~~-dg~i~iwd~~~~~~~--~~~~-----~~~~~~~~~~~~~---~~~l~-~-~- 169 (299)
+.++...-..-+.++| +++.++.+.. .|.|++++..+++.. ..+. ......-++++|+ +..|. . +
T Consensus 24 ~~~va~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~ 103 (347)
T 3das_A 24 LRTVATGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTS 103 (347)
T ss_dssp EEEEECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEEC
T ss_pred eEEeecCCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEec
Confidence 3344444455677888 7774444455 899999987665532 2221 2334455999985 34444 3 2
Q ss_pred -cCCeEEEEecCC----------ceeeeec---cCCccceeeeeccCCCeEEEe
Q 022324 170 -IGTRICIWRRNG----------LRSVFPS---REGTFMKGLCMRYFDPEAVVG 209 (299)
Q Consensus 170 -~d~~i~v~d~~~----------~~~~~~~---~~~~~~~~~~~~~~~~~l~s~ 209 (299)
.++.|.-|.... .+.++.. ...|....+.+.+++..+++.
T Consensus 104 ~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~ 157 (347)
T 3das_A 104 ASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGT 157 (347)
T ss_dssp SSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEEC
T ss_pred CCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEE
Confidence 345666666554 1122221 123334456888888665554
No 358
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=67.26 E-value=58 Score=27.69 Aligned_cols=100 Identities=10% Similarity=-0.022 Sum_probs=54.8
Q ss_pred eeeeccCCC-eEEEecCCCcEEEEEcCCc---ceeeecc---c------cCCceeEEEeCCC----C-eEEEEeC--C--
Q 022324 196 GLCMRYFDP-EAVVGCEDGTARVFDMYSR---KCSQIIR---M------HCAPVTSLSLSED----Q-LIISGSS--L-- 253 (299)
Q Consensus 196 ~~~~~~~~~-~l~s~~~d~~i~iwd~~~~---~~~~~~~---~------~~~~i~~~~~~~~----~-~l~~~~~--d-- 253 (299)
.+++.+++. .++++...|.|++++.... ..+..+. . .......|+++|+ . +.++-+. +
T Consensus 18 ~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~~~~~ 97 (463)
T 2wg3_C 18 GALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTNQERW 97 (463)
T ss_dssp EEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEECCCSS
T ss_pred EEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCCCCCc
Confidence 457778875 4666677899999975422 1112111 1 1345788999996 2 3333221 1
Q ss_pred --------CcEEEEeCCC----------CceEEEeeccCCCCcEEEEEccCCCCeEEeee
Q 022324 254 --------GSIAISGLSS----------DQRVATLRSTDCTGHIICLMYPQFLHMLFFLC 295 (299)
Q Consensus 254 --------g~i~iwd~~~----------~~~~~~~~~~~~~~~i~~~~~s~~g~~l~s~s 295 (299)
..|.-|.+.. .+.+..+...........|+|.|||.+.++.+
T Consensus 98 ~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~G 157 (463)
T 2wg3_C 98 AIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILG 157 (463)
T ss_dssp CSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEEC
T ss_pred ccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeC
Confidence 1343355432 12333333211111578999999998777654
No 359
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=64.95 E-value=53 Score=26.41 Aligned_cols=149 Identities=7% Similarity=0.016 Sum_probs=81.4
Q ss_pred cCeeEEE-ec---CC-EEEEEeCCCcEEEEecCCce-------eEEEecCCCceeEEEEecCCCEEE-EEcCCeEEEEec
Q 022324 113 VGVDQCR-MK---RG-LILTGVGDKVMRLWSLEGYK-------CVEEYSLPNAASLVDFDFDESKIV-GLIGTRICIWRR 179 (299)
Q Consensus 113 ~~i~~~~-~~---~~-~l~s~~~dg~i~iwd~~~~~-------~~~~~~~~~~~~~~~~~~~~~~l~-~~~d~~i~v~d~ 179 (299)
..|..+. .+ ++ +++..+.+|.++--.+.... ....+...+..+.+........++ .+..|.+..+..
T Consensus 95 e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke~D~lv~~~~~~~~d~ill~T~~G~~~rf~~ 174 (327)
T 3uc1_A 95 ERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRDNDELVGAVLCSAGDDLLLVSANGQSIRFSA 174 (327)
T ss_dssp CCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCTTCCEEEEEEECTTCEEEEEETTSEEEEEEC
T ss_pred CEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECCCCEEEEEEEecCCCEEEEEECCCeEEEEEC
Confidence 4555543 33 34 99999999999998876432 222333444555544444445555 999999888877
Q ss_pred C--Cce---------eeeeccCC-ccceeeeeccCCCeEEEecCCCcEEEEEcCCcce-------eeecc--ccCCceeE
Q 022324 180 N--GLR---------SVFPSREG-TFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKC-------SQIIR--MHCAPVTS 238 (299)
Q Consensus 180 ~--~~~---------~~~~~~~~-~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~-------~~~~~--~~~~~i~~ 238 (299)
. .-. ..+....+ .+..+..+ ..+.+++..+..|.++.-.+..... +..+. ...+.+..
T Consensus 175 ~~~eip~~gr~a~Gv~~i~L~~~d~Vv~~~~~-~~~~~ll~~T~~G~~Krt~l~e~~~~~R~~~G~~~~~l~~~~d~lv~ 253 (327)
T 3uc1_A 175 TDEALRPMGRATSGVQGMRFNIDDRLLSLNVV-REGTYLLVATSGGYAKRTAIEEYPVQGRGGKGVLTVMYDRRRGRLVG 253 (327)
T ss_dssp CTTTSCCCCTTSBCEESSCCCTTCCEEEEEEC-CTTCEEEEEETTSEEEEEEGGGSCBCCTTSCCEESSCCCTTTCSEEE
T ss_pred cccccCcCCcCCCCeeeecCCCCCEEEEEEEE-CCCCEEEEEeCCCcEEEEEHHHccccCcCCCcEEEEEecCCCCeEEE
Confidence 6 211 11111111 12212222 2345688888999988877643221 12221 21233444
Q ss_pred EEeC-CCCeEEEEeCCCcEEEEeCC
Q 022324 239 LSLS-EDQLIISGSSLGSIAISGLS 262 (299)
Q Consensus 239 ~~~~-~~~~l~~~~~dg~i~iwd~~ 262 (299)
+... ++..++..+.+|.+.-++..
T Consensus 254 ~~~~~~~~~i~l~T~~G~~ir~~~~ 278 (327)
T 3uc1_A 254 ALIVDDDSELYAVTSGGGVIRTAAR 278 (327)
T ss_dssp EEEECTTCEEEEEEGGGCEEEEEGG
T ss_pred EEEeCCCccEEEEcCCCeEEEEehh
Confidence 4333 33566667777777777653
No 360
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=63.11 E-value=52 Score=25.67 Aligned_cols=149 Identities=9% Similarity=0.017 Sum_probs=82.0
Q ss_pred ccCeeEEEec--CC-EEEEEeCCCcEEEEecCCc------eeEEEecCCCceeEEEEecCCCEEE-EEcCCeEEEEecCC
Q 022324 112 SVGVDQCRMK--RG-LILTGVGDKVMRLWSLEGY------KCVEEYSLPNAASLVDFDFDESKIV-GLIGTRICIWRRNG 181 (299)
Q Consensus 112 ~~~i~~~~~~--~~-~l~s~~~dg~i~iwd~~~~------~~~~~~~~~~~~~~~~~~~~~~~l~-~~~d~~i~v~d~~~ 181 (299)
...|..+... ++ +++..+.+|.++-...... .....+...+..+.+........++ .+..|.++.++...
T Consensus 67 ~e~i~~v~~~~~~~~~~v~~T~~G~iKr~~l~~~~~~~~G~~~i~lkegD~l~~~~~~~~~~~ill~T~~G~~~r~~~~e 146 (276)
T 3no0_A 67 EEKIVGAFIREKFGNRLLLATKKGYVKKIPLAEFEYKAQGMPIIKLTEGDEVVSIASSVDETHILLFTKKGRVARFSVRE 146 (276)
T ss_dssp TCCEEEEEEGGGSCSEEEEEETTSEEEEEEGGGTTTCSTTEECSCCCTTCCEEEEEECCSSCEEEEEETTSEEEEEEGGG
T ss_pred CCEEEEEECCcCCCCEEEEEeCCCEEEEEEHHHhhhhcCCeEEEecCCCCEEEEEEEeCCCCEEEEEECCCEEEEEEhhh
Confidence 3455554323 33 8999999999999987653 2222233344555544444444555 99999988887532
Q ss_pred ce---------eeeeccCCc-cceeeeeccCCCeEEEecCCCcEEEEEcCCcc-------eeeeccccCCceeEEEe-CC
Q 022324 182 LR---------SVFPSREGT-FMKGLCMRYFDPEAVVGCEDGTARVFDMYSRK-------CSQIIRMHCAPVTSLSL-SE 243 (299)
Q Consensus 182 ~~---------~~~~~~~~~-~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~-------~~~~~~~~~~~i~~~~~-~~ 243 (299)
-. ..+....+. ...+.. ...+..++..+..|.++...+.... -+..+ ...+.+..+.. .+
T Consensus 147 ip~~gR~a~Gv~~i~L~~~d~vv~~~~-~~~~~~ll~~T~~G~~kr~~~~e~~~~~R~gkGv~~i-~~~~~lv~~~~~~~ 224 (276)
T 3no0_A 147 VPPSTPGARGVQGIKLEKNDETSGLRI-WNGEPYLLVITAKGRVKKISHEEIPKTNRGVKGTEVS-GTKDTLVDLIPIKE 224 (276)
T ss_dssp SCBCCTTCCCEECCCCCTTCCEEEEEE-ESSCSEEEEEETTSCEEEEEGGGSCCCCTTCCCEECC-CSSSCEEEEEEESS
T ss_pred CCCcCCCCCCEEEEccCCCCEEEEEEE-eCCCCEEEEEeCCCcEEEeEHHHcccCCCCCcceEEE-cCCCcEEEEEEeCC
Confidence 11 111111221 121222 2334568888889998888765321 22222 22344444433 33
Q ss_pred CCeEEEEeCCCcEEE--EeCC
Q 022324 244 DQLIISGSSLGSIAI--SGLS 262 (299)
Q Consensus 244 ~~~l~~~~~dg~i~i--wd~~ 262 (299)
+..++..+.+|.+.. ++..
T Consensus 225 ~~~i~~~t~~G~~ir~~~~~~ 245 (276)
T 3no0_A 225 EVELLITTKNGKAFYDKINQK 245 (276)
T ss_dssp EEEEEEEETTSCEEEEEEEGG
T ss_pred CCEEEEEcCCCeEEEeeeCHH
Confidence 355666777787777 7654
No 361
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=58.45 E-value=12 Score=36.15 Aligned_cols=29 Identities=17% Similarity=0.243 Sum_probs=25.7
Q ss_pred cCC-EEEEEeCCCcEEEEecCCceeEEEec
Q 022324 121 KRG-LILTGVGDKVMRLWSLEGYKCVEEYS 149 (299)
Q Consensus 121 ~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~ 149 (299)
++. ++++-+.|+++|+|++.+++++.+..
T Consensus 247 ~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 247 STYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp TTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred CCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 444 99999999999999999999998765
No 362
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=50.17 E-value=88 Score=24.33 Aligned_cols=144 Identities=12% Similarity=0.024 Sum_probs=72.9
Q ss_pred cCeeEEEecCCEEEEEeCCCcEEEEecCC-ceeEEEecCCCceeEEEEecCCCEEEEEcCCeEEEEecCCce-eeeeccC
Q 022324 113 VGVDQCRMKRGLILTGVGDKVMRLWSLEG-YKCVEEYSLPNAASLVDFDFDESKIVGLIGTRICIWRRNGLR-SVFPSRE 190 (299)
Q Consensus 113 ~~i~~~~~~~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~i~v~d~~~~~-~~~~~~~ 190 (299)
..|..++.-....+.-. ||.|..|-... +++-........+..++. .....++-.||.++.|-..... .-.....
T Consensus 102 ~~v~~ia~G~~hs~al~-~G~v~~wG~n~~gqlg~~~~~~~~i~~i~~--G~~~~~~l~~G~v~~wG~n~~gqlg~p~~~ 178 (282)
T 3qhy_B 102 SGVDAIAAGAWASYALK-DGKVIAWGDDSDGQTTVPAEAQSGVTALDG--GVYTALAVKNGGVIAWGDNYFGQTTVPAEA 178 (282)
T ss_dssp SSEEEEEEETTEEEEEE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEE--CSSEEEEEETTEEEEEECCTTSTTSCCGGG
T ss_pred CCeEEEECcCCEEEEEe-CCeEEEecCCCCCcCCCCccCCCCeEEEEc--ccCEEEEEECCEEEEecCCCCCCCCCceec
Confidence 35666666555333344 89999997653 221111111122333333 3333332228999999765432 1111111
Q ss_pred CccceeeeeccCCCeEEEecCCCcEEEEEcCCcceeeeccccCCceeEEEeCCCCeEEEEeCCCcEEEEeCCCC
Q 022324 191 GTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSEDQLIISGSSLGSIAISGLSSD 264 (299)
Q Consensus 191 ~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 264 (299)
...+..+.......+.- .||.+..|-......+..-......|..++......++.. ||.|..|-....
T Consensus 179 --~~~v~~i~~G~~hs~al-~~G~v~~wG~n~~gqlg~p~~~~~~v~~i~~G~~h~~al~--~g~v~~wG~n~~ 247 (282)
T 3qhy_B 179 --QSGVDDVAGGIFHSLAL-KDGKVIAWGDNRYKQTTVPTEALSGVSAIASGEWYSLALK--NGKVIAWGSSRT 247 (282)
T ss_dssp --GSSEEEEEECSSEEEEE-ETTEEEEEECCTTSTTCCCGGGGSSCCEEEECSSCEEEEE--TTEEEEESTTCC
T ss_pred --CCCeEEEEecCCEEEEE-ECCeEEEEECCCCCCCCCCcccCCCceEEEcCCCEEEEEE--CCEEEEecCCCC
Confidence 11233444444443333 5899999976543222111112345777776555444444 999999987653
No 363
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=50.04 E-value=6.9 Score=34.24 Aligned_cols=37 Identities=30% Similarity=0.371 Sum_probs=29.1
Q ss_pred chhccCcHHHHHHHhhccC-ccchhhHHHhhhhHHHHh
Q 022324 22 ATIESLNGDIICMIFSSLG-FFDLVRCSAVCKSWNAII 58 (299)
Q Consensus 22 ~~~~~~~~~~~~~i~~~~~-h~~~v~~~~~~~~~~~l~ 58 (299)
+.+..+|.|...+|+++++ ..+.+.+..+|+.|+.+.
T Consensus 4 d~~~~LPdevL~~If~~L~~~~d~~~~s~vck~W~~~~ 41 (594)
T 2p1m_B 4 RIALSFPEEVLEHVFSFIQLDKDRNSVSLVCKSWYEIE 41 (594)
T ss_dssp ------CHHHHHHHHHTCCCHHHHHHHHTSCHHHHHHH
T ss_pred cchhhCCHHHHHHHHhhcCCchhHHHHHHHHHHHHHhh
Confidence 5677899999999999999 899999999999999883
No 364
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=49.92 E-value=93 Score=24.54 Aligned_cols=143 Identities=10% Similarity=0.013 Sum_probs=74.0
Q ss_pred CcEEEEecCCceeEEEecCCCceeEEEEecCCCEEE-EE----cCCeEEEEecCCce-eeeeccCCccceeeeeccCCCe
Q 022324 132 KVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESKIV-GL----IGTRICIWRRNGLR-SVFPSREGTFMKGLCMRYFDPE 205 (299)
Q Consensus 132 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~----~d~~i~v~d~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 205 (299)
..|+..++...+....... ....++++++.|+ .. .+..|+..++.+.. ..+..... .++.+.+..
T Consensus 88 ~~Iy~i~~dg~~~~~l~~~----~~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~~~lt~~~~-----~~~~~~g~~ 158 (302)
T 3s25_A 88 NSLCRIKRNGHGSTVLDPD----PCIYASLIGNYIYYLHYDTQTATSLYRIRIDGEEKKKIKNHYL-----FTCNTSDRY 158 (302)
T ss_dssp EEEEEEETTSCCCEEEECS----CEEEEEEETTEEEEEEESSSSCEEEEEEETTSCCCEEEESSCC-----CCSEEETTE
T ss_pred CeEEEEeCCCCcceEeecC----CccEEEEeCCEEEEEeecCCCCceEEEEECCCCCeEEEeCCCc-----eEeeEECCE
Confidence 4566667665543322221 1236778888988 54 24466666776543 22222211 356777888
Q ss_pred EEEecC-CCcEEEEEcCCcceeeeccccCCceeEEEeCCC-CeEEEEeCC--CcEEEEeCCCCceEEEeeccCCCCcEEE
Q 022324 206 AVVGCE-DGTARVFDMYSRKCSQIIRMHCAPVTSLSLSED-QLIISGSSL--GSIAISGLSSDQRVATLRSTDCTGHIIC 281 (299)
Q Consensus 206 l~s~~~-d~~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~-~~l~~~~~d--g~i~iwd~~~~~~~~~~~~~~~~~~i~~ 281 (299)
|+-.+. ...|..-++..+.....+. +... ..+.|+ .+|+-...+ ..|..-++.... ...+.. . .+.
T Consensus 159 iy~t~~g~~~Iy~~~l~g~~~~~l~~---~~~~-~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~-~~~Lt~--~--~~~- 228 (302)
T 3s25_A 159 FYYNNPKNGQLYRYDTASQSEALFYD---CNCY-KPVVLDDTNVYYMDVNRDNAIVHVNINNPN-PVVLTE--A--NIE- 228 (302)
T ss_dssp EEEECTTTCCEEEEETTTTEEEEEEC---SCEE-EEEEEETTEEEEEEGGGTTEEEEECSSSCC-CEECSC--S--CEE-
T ss_pred EEEEeCCCceEEEEECCCCCEEEEeC---CCcc-ceeeecCCEEEEEEcCCCcEEEEEECCCCC-eEEEeC--C--Ccc-
Confidence 664443 6778888877554433332 2222 234576 666554432 356666665333 233321 1 232
Q ss_pred EEccCCCCeEEee
Q 022324 282 LMYPQFLHMLFFL 294 (299)
Q Consensus 282 ~~~s~~g~~l~s~ 294 (299)
.|+|++.+|.-+
T Consensus 229 -~~~~~g~~Iy~~ 240 (302)
T 3s25_A 229 -HYNVYGSLIFYQ 240 (302)
T ss_dssp -EEEEETTEEEEE
T ss_pred -eEEECCCEEEEE
Confidence 356666666543
No 365
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=43.66 E-value=1.5e+02 Score=25.04 Aligned_cols=98 Identities=11% Similarity=-0.140 Sum_probs=53.3
Q ss_pred cCeeEEEe-cCCEEEEEeCCC-cEEEEecCCceeE--EEec-------CCCceeEEEEecC---CCEEE-EEc-------
Q 022324 113 VGVDQCRM-KRGLILTGVGDK-VMRLWSLEGYKCV--EEYS-------LPNAASLVDFDFD---ESKIV-GLI------- 170 (299)
Q Consensus 113 ~~i~~~~~-~~~~l~s~~~dg-~i~iwd~~~~~~~--~~~~-------~~~~~~~~~~~~~---~~~l~-~~~------- 170 (299)
..-+.++| +++.|+.+...+ .|++++..+++.. ..+. ......-++++|+ +..|. +..
T Consensus 27 ~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~ 106 (454)
T 1cru_A 27 NKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKST 106 (454)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC-
T ss_pred CCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCC
Confidence 34568888 777555555664 7888876655432 2222 1233345999995 55554 332
Q ss_pred ------CCeEEEEecCCc-------eeeee---ccCCccceeeeeccCCCeEEEec
Q 022324 171 ------GTRICIWRRNGL-------RSVFP---SREGTFMKGLCMRYFDPEAVVGC 210 (299)
Q Consensus 171 ------d~~i~v~d~~~~-------~~~~~---~~~~~~~~~~~~~~~~~~l~s~~ 210 (299)
...|.-++.... +.++. ....|....+++.+++..+++.+
T Consensus 107 ~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 107 DKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp -CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEEC
T ss_pred ccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEEC
Confidence 235666655321 12222 11234445678888887655533
No 366
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=41.87 E-value=1.4e+02 Score=24.10 Aligned_cols=135 Identities=13% Similarity=0.027 Sum_probs=71.4
Q ss_pred CeeEEEe-cCCE-EEEEeCCCcEEEEecCCceeEEEec--------CCCceeEEEEecC---CCEEE-EE-c-------C
Q 022324 114 GVDQCRM-KRGL-ILTGVGDKVMRLWSLEGYKCVEEYS--------LPNAASLVDFDFD---ESKIV-GL-I-------G 171 (299)
Q Consensus 114 ~i~~~~~-~~~~-l~s~~~dg~i~iwd~~~~~~~~~~~--------~~~~~~~~~~~~~---~~~l~-~~-~-------d 171 (299)
.-+.+.| +++. |+.+...|.|++++.. ++....+. .......++++|+ +..|. +. . .
T Consensus 19 ~P~~i~~~pdG~~l~V~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~ 97 (353)
T 2g8s_A 19 HPWALAFLPDNHGMLITLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAG 97 (353)
T ss_dssp SEEEEEECSTTCCEEEEETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEE
T ss_pred CcEEEEEcCCCCEEEEEeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCce
Confidence 4467777 6665 8888889999999854 33211111 1223455999996 44444 32 2 2
Q ss_pred CeEEEEecCCc-------eeeeecc-----CCccceeeeeccCCCeEEEecC-------------CCcEEEEEcCCcc--
Q 022324 172 TRICIWRRNGL-------RSVFPSR-----EGTFMKGLCMRYFDPEAVVGCE-------------DGTARVFDMYSRK-- 224 (299)
Q Consensus 172 ~~i~v~d~~~~-------~~~~~~~-----~~~~~~~~~~~~~~~~l~s~~~-------------d~~i~iwd~~~~~-- 224 (299)
..|..++.... +.++... ..+....+.+.+++..+++.+. .|+|.-+|....-
T Consensus 98 ~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p~ 177 (353)
T 2g8s_A 98 TAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEIPD 177 (353)
T ss_dssp EEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCCCT
T ss_pred eEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCCCC
Confidence 35666766432 1222221 1233335788888855444332 2457666765210
Q ss_pred ----------eeeeccccCCceeEEEeCC-CCeEEE
Q 022324 225 ----------CSQIIRMHCAPVTSLSLSE-DQLIIS 249 (299)
Q Consensus 225 ----------~~~~~~~~~~~i~~~~~~~-~~~l~~ 249 (299)
....+.........++|+| +..|.+
T Consensus 178 ~npf~~~~~~~~~i~a~G~rnp~gl~~d~~~g~l~~ 213 (353)
T 2g8s_A 178 DNPFIKESGVRAEIWSYGIRNPQGMAMNPWSNALWL 213 (353)
T ss_dssp TCTTTTSTTSCTTEEEECCSEEEEEEEETTTTEEEE
T ss_pred CCCCcCCCCCCccEEEEcCcCccceEEECCCCCEEE
Confidence 1112221223478899998 443444
No 367
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=40.66 E-value=1.3e+02 Score=23.42 Aligned_cols=141 Identities=9% Similarity=-0.035 Sum_probs=72.3
Q ss_pred CeeEEEecCC-EEEEEeCCCcEEEEecCC-ceeEEEecCCCceeEEEEecCCCEEEEEcCCeEEEEecCCce-eeeeccC
Q 022324 114 GVDQCRMKRG-LILTGVGDKVMRLWSLEG-YKCVEEYSLPNAASLVDFDFDESKIVGLIGTRICIWRRNGLR-SVFPSRE 190 (299)
Q Consensus 114 ~i~~~~~~~~-~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~i~v~d~~~~~-~~~~~~~ 190 (299)
.|..++.-.. .++. . ||.|..|-... +++-.-......+..++...+ ..++-. +|.|+.|-..... .-....
T Consensus 64 ~i~~ia~G~~hs~~l-~-~G~v~~wG~n~~Gqlg~P~~~~~~v~~ia~G~~-hs~al~-~G~v~~wG~n~~gqlg~~~~- 138 (282)
T 3qhy_B 64 GVDAIAAGNYHSLAL-K-DGEVIAWGGNEDGQTTVPAEARSGVDAIAAGAW-ASYALK-DGKVIAWGDDSDGQTTVPAE- 138 (282)
T ss_dssp CCCEEEECSSEEEEE-E-TTEEEEEECCTTSTTCCCGGGSSSEEEEEEETT-EEEEEE-TTEEEEEECCTTSTTSCCGG-
T ss_pred CEEEEEeCCCEEEEE-E-CCEEEEeeCCCCCCCCCCcccCCCeEEEECcCC-EEEEEe-CCeEEEecCCCCCcCCCCcc-
Confidence 5666666444 3444 4 89999997653 221100111223333444332 223355 9999999765432 111111
Q ss_pred CccceeeeeccCCCeEEEecCCCcEEEEEcCCcceeeeccccCCceeEEEeCCCCeEEEEeCCCcEEEEeCCC
Q 022324 191 GTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSEDQLIISGSSLGSIAISGLSS 263 (299)
Q Consensus 191 ~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~ 263 (299)
....+..+.......+.-. ||.+..|-......+..-......|..++......++. .||.|..|-...
T Consensus 139 -~~~~i~~i~~G~~~~~~l~-~G~v~~wG~n~~gqlg~p~~~~~~v~~i~~G~~hs~al--~~G~v~~wG~n~ 207 (282)
T 3qhy_B 139 -AQSGVTALDGGVYTALAVK-NGGVIAWGDNYFGQTTVPAEAQSGVDDVAGGIFHSLAL--KDGKVIAWGDNR 207 (282)
T ss_dssp -GGSSEEEEEECSSEEEEEE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSSEEEEE--ETTEEEEEECCT
T ss_pred -CCCCeEEEEcccCEEEEEE-CCEEEEecCCCCCCCCCceecCCCeEEEEecCCEEEEE--ECCeEEEEECCC
Confidence 1112334444444433334 78999997654322211111235678887766644444 499999997654
No 368
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=33.40 E-value=1.9e+02 Score=23.20 Aligned_cols=138 Identities=9% Similarity=0.010 Sum_probs=73.7
Q ss_pred EEEEEeCCCcEEEEecCCce-------eEEE--ecCCCceeEEEEecCCCE-EEEEcCCeEEEEe---cCCc------ee
Q 022324 124 LILTGVGDKVMRLWSLEGYK-------CVEE--YSLPNAASLVDFDFDESK-IVGLIGTRICIWR---RNGL------RS 184 (299)
Q Consensus 124 ~l~s~~~dg~i~iwd~~~~~-------~~~~--~~~~~~~~~~~~~~~~~~-l~~~~d~~i~v~d---~~~~------~~ 184 (299)
.+++.+.+|.|+--.+.+.+ -+.. ++..+....+........ ++.+..|.++-.. +... ..
T Consensus 5 v~v~ls~~GyiKr~~~~~y~~~~rgg~g~~~~~~ke~D~~~~~~~~~t~d~ll~fT~~Gr~y~~~~~~lp~~~r~~~G~~ 84 (327)
T 3uc1_A 5 VVVTITETGYAKRTKTDLYRSQKRGGKGVQGAGLKQDDIVAHFFVCSTHDLILFFTTQGRVYRAKAYDLPEASRTARGQH 84 (327)
T ss_dssp EEEEEETTSEEEEEEHHHHHHHC--------CCCCGGGCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCSSSCCEE
T ss_pred EEEEEeCCCEEEEeeHHHhhhcccCCCCccccccCCCCEEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCcCCCccCCCEE
Confidence 67888889988876543211 1112 222233333333334444 4488888766554 3321 11
Q ss_pred ---eeec-cCCccceeeeecc--CCCeEEEecCCCcEEEEEcCCcce-------eeeccccCCceeEEEeCCC-CeEEEE
Q 022324 185 ---VFPS-REGTFMKGLCMRY--FDPEAVVGCEDGTARVFDMYSRKC-------SQIIRMHCAPVTSLSLSED-QLIISG 250 (299)
Q Consensus 185 ---~~~~-~~~~~~~~~~~~~--~~~~l~s~~~d~~i~iwd~~~~~~-------~~~~~~~~~~i~~~~~~~~-~~l~~~ 250 (299)
.+.. ....+..++.+.. ..+.++..+.+|.++.-.+..... ...+.. .+.+..+....+ ..++..
T Consensus 85 i~~~l~l~~~e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke-~D~lv~~~~~~~~d~ill~ 163 (327)
T 3uc1_A 85 VANLLAFQPEERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRD-NDELVGAVLCSAGDDLLLV 163 (327)
T ss_dssp HHHHTTCCTTCCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCT-TCCEEEEEEECTTCEEEEE
T ss_pred HHHccCCCCCCEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECC-CCEEEEEEEecCCCEEEEE
Confidence 1111 1122333334442 356689999999999888764321 122323 344554444444 778888
Q ss_pred eCCCcEEEEeCC
Q 022324 251 SSLGSIAISGLS 262 (299)
Q Consensus 251 ~~dg~i~iwd~~ 262 (299)
+..|.+..+...
T Consensus 164 T~~G~~~rf~~~ 175 (327)
T 3uc1_A 164 SANGQSIRFSAT 175 (327)
T ss_dssp ETTSEEEEEECC
T ss_pred ECCCeEEEEECc
Confidence 889988877765
No 369
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=29.71 E-value=1.1e+02 Score=27.52 Aligned_cols=53 Identities=8% Similarity=0.179 Sum_probs=33.3
Q ss_pred CeEEEEeCCCcEE-EEeCCCCc-------eEEEeeccCCCCcEEEEEccCCCCeEEeeecc
Q 022324 245 QLIISGSSLGSIA-ISGLSSDQ-------RVATLRSTDCTGHIICLMYPQFLHMLFFLCFL 297 (299)
Q Consensus 245 ~~l~~~~~dg~i~-iwd~~~~~-------~~~~~~~~~~~~~i~~~~~s~~g~~l~s~s~~ 297 (299)
..++.|+.+|.|. +.-...+. .+..+.......+|..|.+++++.+|.+++-.
T Consensus 430 tVlFLGT~~G~I~Kvv~~~~~~~~~~~~~~leEi~v~~~~~pI~~L~ld~~~~~LYV~t~~ 490 (667)
T 4gz8_A 430 DVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTA 490 (667)
T ss_dssp EEEEEEETTSEEEEEEEEC------CEEEEEEEEECSSSCCCCCEEEEETTTTEEEEEBSS
T ss_pred EEEEEECCCCeEEEEEEcCCCCccccceEEEEEEeecCCCceeeeEEEcCCCCEEEEEECC
Confidence 4688889999873 44332211 23334333332389999999999999887643
No 370
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=25.21 E-value=2.4e+02 Score=24.20 Aligned_cols=63 Identities=8% Similarity=0.189 Sum_probs=38.6
Q ss_pred ceeEEEeCC-----C--CeEEEEeCCCcEE-EEeCCCCc-------eEEEeeccCCCCcEEEEEccCCCCeEEeeecc
Q 022324 235 PVTSLSLSE-----D--QLIISGSSLGSIA-ISGLSSDQ-------RVATLRSTDCTGHIICLMYPQFLHMLFFLCFL 297 (299)
Q Consensus 235 ~i~~~~~~~-----~--~~l~~~~~dg~i~-iwd~~~~~-------~~~~~~~~~~~~~i~~~~~s~~g~~l~s~s~~ 297 (299)
..++|+... + ..+..|+.+|.|. +.-...+. .+..+.......+|..|.+++++.+|.+++-.
T Consensus 405 ~lT~IaVd~v~~~~~~~tV~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~ 482 (495)
T 1q47_A 405 QFTQIVVDRVDAEDGQYDVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTA 482 (495)
T ss_dssp CEEEEEEEEEECSSCEEEEEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSS
T ss_pred ceEEEEEEEEccCCCcEEEEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECC
Confidence 356666551 2 5788899999874 43332221 23344432211289999999999999888754
No 371
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=23.82 E-value=25 Score=30.65 Aligned_cols=34 Identities=24% Similarity=0.351 Sum_probs=30.7
Q ss_pred cCcHHHHHHHhhcc-CccchhhHHHhhhhHHHHhh
Q 022324 26 SLNGDIICMIFSSL-GFFDLVRCSAVCKSWNAIIN 59 (299)
Q Consensus 26 ~~~~~~~~~i~~~~-~h~~~v~~~~~~~~~~~l~~ 59 (299)
.+|.|...+|++++ +..+.+.+..+|+.|..+..
T Consensus 15 ~LPdeil~~I~~~L~~~~d~~~~s~vck~W~~~~~ 49 (592)
T 3ogk_B 15 ATVDDVIEQVMTYITDPKDRDSASLVCRRWFKIDS 49 (592)
T ss_dssp CCGGGTHHHHHTTCCCHHHHHHHTTSCHHHHHHHH
T ss_pred CCCHHHHHHHHHhcCCHHHHHHHHHHhHHHHHhhh
Confidence 58999999999999 78999999999999998853
No 372
>3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=22.69 E-value=1.6e+02 Score=18.98 Aligned_cols=15 Identities=13% Similarity=0.102 Sum_probs=10.1
Q ss_pred eEEEecCCCcEEEEE
Q 022324 205 EAVVGCEDGTARVFD 219 (299)
Q Consensus 205 ~l~s~~~d~~i~iwd 219 (299)
+.+.--.||.+++|+
T Consensus 87 ~~l~Lq~dGNlvly~ 101 (111)
T 3mez_A 87 YAATLGPDQHVTIYG 101 (111)
T ss_dssp CEEEECTTSCEEEEC
T ss_pred EEEEECCCCeEEEec
Confidence 345566778887776
No 373
>1ukf_A Avirulence protein AVRPPH3; AVRPPHB, hypersensitive response, hydrolase; 1.35A {Pseudomonas syringae PV} SCOP: d.3.1.10
Probab=21.27 E-value=1e+02 Score=22.41 Aligned_cols=33 Identities=9% Similarity=0.034 Sum_probs=23.6
Q ss_pred CCceeEEEeCCC--CeEEEEeCCCcEEEEeCCCCc
Q 022324 233 CAPVTSLSLSED--QLIISGSSLGSIAISGLSSDQ 265 (299)
Q Consensus 233 ~~~i~~~~~~~~--~~l~~~~~dg~i~iwd~~~~~ 265 (299)
...+.++.|.++ .-+++...+|++.++|.+-|+
T Consensus 118 ~~hllsl~f~~g~aHaia~S~~g~~~tlFDPN~GE 152 (188)
T 1ukf_A 118 RKHLLSLRFANVQGHAIACSCEGSQFKLFDPNLGE 152 (188)
T ss_dssp CEEEEEEEETTTEEEEEEEEEETTEEEEEETTTEE
T ss_pred CceEEEEEecCCCceeEEeccCCCeEEEeCCCCce
Confidence 344555666554 456677789999999998776
No 374
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=20.33 E-value=2.6e+02 Score=23.94 Aligned_cols=53 Identities=17% Similarity=0.218 Sum_probs=32.2
Q ss_pred EEEecCCCcEEEEEcC-Cc-------ceeeecc--ccCCceeEEEeCCC-CeEEEEeCCCcEEE
Q 022324 206 AVVGCEDGTARVFDMY-SR-------KCSQIIR--MHCAPVTSLSLSED-QLIISGSSLGSIAI 258 (299)
Q Consensus 206 l~s~~~d~~i~iwd~~-~~-------~~~~~~~--~~~~~i~~~~~~~~-~~l~~~~~dg~i~i 258 (299)
+..|..+|.|.-.-+. .+ ..+.++. ....+|..|.++++ ++|.+++.++.++|
T Consensus 424 ~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V~~v 487 (495)
T 1q47_A 424 MFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 487 (495)
T ss_dssp EEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeEEEE
Confidence 5567778876533322 11 1222333 23578899999988 88888887775544
Done!