BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>022328
MYLKKPLWSEGVEKQMESETETAAATAVGELANSLKQQRVQREITLALRTGLRDARAEFS
FLRVRGLRSLLKILRSVAESDSTIHFFCQSQSVPELQVVPVLFQHSFKEDSVDERVTSLD
HIFTVDPMRVTSPSTDAEVALALRVLEGCCLLHRESAILAHKHKAIKILMNILSTRGALE
QGACLDALTSLMLDSSANQLDFEACNGIEEVAELIRDKQVDENLRLRCGEFLLLLIGHVN
GRQLSPMATIHEDIRRLLGEKSASLIWAASQFGSTLNPEERLMALHIQARRVLESLDLY

High Scoring Gene Products

Symbol, full name Information P value
ISI1
IMPAIRED SUCROSE INDUCTION 1 		protein from Arabidopsis thaliana 4.9e-101

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  022328
        (299 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2137757 - symbol:ISI1 "IMPAIRED SUCROSE INDUCT...  1002  4.9e-101  1


>TAIR|locus:2137757 [details] [associations]
            symbol:ISI1 "IMPAIRED SUCROSE INDUCTION 1" species:3702
            "Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
            [GO:0009745 "sucrose mediated signaling" evidence=IMP] [GO:0006109
            "regulation of carbohydrate metabolic process" evidence=IMP]
            GO:GO:0006109 EMBL:CP002687 Gene3D:1.25.10.10 InterPro:IPR011989
            InterPro:IPR012535 Pfam:PF08045 EMBL:BT003934 EMBL:BT005053
            EMBL:AJ697740 IPI:IPI00536509 RefSeq:NP_194505.2 UniGene:At.27940
            STRING:Q84J43 PaxDb:Q84J43 PRIDE:Q84J43 DNASU:828889
            EnsemblPlants:AT4G27750.1 GeneID:828889 KEGG:ath:AT4G27750
            TAIR:At4g27750 eggNOG:NOG282865 HOGENOM:HOG000070850
            InParanoid:Q84J43 OMA:EPMKITS PhylomeDB:Q84J43
            ProtClustDB:CLSN2680119 Genevestigator:Q84J43 Uniprot:Q84J43
        Length = 305

 Score = 1002 (357.8 bits), Expect = 4.9e-101, P = 4.9e-101
 Identities = 199/306 (65%), Positives = 242/306 (79%)

Query:     1 MYLKKPLWSEGVE-------KQMXXXXXXXXXXXVGELANSLKQQRVQREITLALRTGLR 53
             MYLK+P+WS+G         +             V EL  SL  QR+ RE+TL+LRTGLR
Sbjct:     1 MYLKRPIWSDGASATPENPSESETGEESDAASMVVEELVTSLNTQRLYRELTLSLRTGLR 60

Query:    54 DARAEFSFLRVRGLRSLLKILRSVAESDSTIHFFCQSQSVPELQVVPVLFQHSFKEDSVD 113
             DA AEFSFLR+RGLRSLLK LR+VA+SDS I  F  +Q++ +LQ+VPVLFQHS KE + D
Sbjct:    61 DACAEFSFLRIRGLRSLLKTLRTVADSDSIIRLFSHTQTISDLQLVPVLFQHSLKE-AED 119

Query:   114 ERVTSLDHIFTVDPMRVTSPSTDAEVALALRVLEGCCLLHRESAILAHKHKAIKILMNIL 173
             ++VTSLDHIF+V+PM++TSPSTDAEVA+ALRVLEGCCLLH +S +LAHKH A++++MN+L
Sbjct:   120 DKVTSLDHIFSVEPMKITSPSTDAEVAVALRVLEGCCLLHPQSTVLAHKHGAVRVMMNVL 179

Query:   174 STRGALEQGACLDALTSLMLDSSANQLDFEACNGIEEVAELIRDKQVDENXXXXXXXXXX 233
             STRG LEQGACLDAL S++LDSSANQ+DF ACNGIEEVA L+RDKQ DEN          
Sbjct:   180 STRGVLEQGACLDALISVLLDSSANQVDFGACNGIEEVAMLMRDKQADENLRLRCGEFLL 239

Query:   234 XXIGHVNGRQLSPMATIHEDIRRLLGEKSASLIWAASQFGSTLNPEERLMALHIQARRVL 293
               +GHVNG+  SP+A+++EDIRRLLGEKSASLIWAASQFGST +PE+R+ ALHIQA RVL
Sbjct:   240 LLVGHVNGKDRSPIASVNEDIRRLLGEKSASLIWAASQFGSTGDPEQRITALHIQAGRVL 299

Query:   294 ESLDLY 299
             ESLDLY
Sbjct:   300 ESLDLY 305


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.320   0.133   0.373    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      299       276   0.00079  115 3  11 22  0.46    33
                                                     33  0.41    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  600 (64 KB)
  Total size of DFA:  176 KB (2102 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  21.74u 0.18s 21.92t   Elapsed:  00:00:01
  Total cpu time:  21.74u 0.18s 21.92t   Elapsed:  00:00:01
  Start:  Thu May  9 16:22:33 2013   End:  Thu May  9 16:22:34 2013

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