BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 022328
         (299 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|P36589|CDC14_SCHPO Cell division control protein 14 OS=Schizosaccharomyces pombe
           (strain 972 / ATCC 24843) GN=cdc14 PE=1 SV=1
          Length = 240

 Score = 43.1 bits (100), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 23/96 (23%), Positives = 48/96 (50%), Gaps = 1/96 (1%)

Query: 143 LRVLEGCCLLHRESAILAHKHKAIKILMNIL-STRGALEQGACLDALTSLMLDSSANQLD 201
           L V+EG  L+H +S  L      +++ +++L  ++ ++ Q A +  L  +M D       
Sbjct: 95  LHVIEGLVLIHPKSQTLFEDKATLRLFIHLLQPSQPSMLQVAAMKTLVCIMADRPLAIRL 154

Query: 202 FEACNGIEEVAELIRDKQVDENLRLRCGEFLLLLIG 237
           FE  NG++++  + + KQ  ++ R +  EF    + 
Sbjct: 155 FEQINGLQQICVVFKHKQTSQDTRFQILEFFYFYLS 190


>sp|P32742|IKKE1_CAEEL Inhibitor of nuclear factor kappa-B kinase epsilon subunit homolog
           1 OS=Caenorhabditis elegans GN=ikke-1 PE=2 SV=5
          Length = 820

 Score = 33.9 bits (76), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 18/49 (36%), Positives = 24/49 (48%)

Query: 84  IHFFCQSQSVPELQVVPVLFQHSFKEDSVDERVTSLDHIFTVDPMRVTS 132
           + FFCQ++S P  +  P   Q S  E S+DE  TS +      P  V S
Sbjct: 749 VSFFCQAESSPNKEQFPKPEQDSILESSIDEGSTSFESTPPSSPPDVGS 797


>sp|Q8H125|SCL5_ARATH Scarecrow-like protein 5 OS=Arabidopsis thaliana GN=SCL5 PE=2 SV=1
          Length = 597

 Score = 33.1 bits (74), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 21/82 (25%), Positives = 37/82 (45%)

Query: 80  SDSTIHFFCQSQSVPELQVVPVLFQHSFKEDSVDERVTSLDHIFTVDPMRVTSPSTDAEV 139
           S ST  FF +SQ + + Q    L  + ++ D++D   T    I     M    PS+  ++
Sbjct: 38  SISTKSFFSKSQRISQTQSPICLSANYYQPDNLDMEATQKHMIQEGSSMFYHQPSSVKQM 97

Query: 140 ALALRVLEGCCLLHRESAILAH 161
            L+++  +  C L   S   +H
Sbjct: 98  DLSVQTFDSYCTLESSSGTKSH 119


>sp|Q5EFZ4|VAC8_PICPA Vacuolar protein 8 OS=Komagataella pastoris GN=VAC8 PE=3 SV=3
          Length = 556

 Score = 32.3 bits (72), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 2/67 (2%)

Query: 10  EGVEKQMESETETAAATAVGELANSLKQQRVQREITLALRTGLRDARAEFSFLRVRGLRS 69
           EG  K++ S TE    + + +L +S    RVQ + TLALR    DA  +   +R  GL +
Sbjct: 240 EGNRKKLAS-TEPKLISQLVQLMDS-TSPRVQCQATLALRNLASDANYQLEIVRAGGLPN 297

Query: 70  LLKILRS 76
           L+ +L S
Sbjct: 298 LVTLLNS 304


>sp|O55174|ZNT4_RAT Zinc transporter 4 OS=Rattus norvegicus GN=Slc30a4 PE=2 SV=1
          Length = 430

 Score = 31.6 bits (70), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 22/92 (23%), Positives = 44/92 (47%)

Query: 191 LMLDSSANQLDFEACNGIEEVAELIRDKQVDENLRLRCGEFLLLLIGHVNGRQLSPMATI 250
           L L +S   L  + C+   +  EL++ ++V   L +    +LL +IG + G  ++    I
Sbjct: 81  LPLTNSQLSLKMDPCDNCSKRRELLKQRKVKTRLTIAAVLYLLFMIGELVGGYMANSLAI 140

Query: 251 HEDIRRLLGEKSASLIWAASQFGSTLNPEERL 282
             D   +L + SA ++   + + S+ +P  R 
Sbjct: 141 MTDALHMLTDLSAIILTLLALWLSSKSPTRRF 172


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.320    0.133    0.371 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 93,645,584
Number of Sequences: 539616
Number of extensions: 3354050
Number of successful extensions: 9889
Number of sequences better than 100.0: 13
Number of HSP's better than 100.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 9883
Number of HSP's gapped (non-prelim): 13
length of query: 299
length of database: 191,569,459
effective HSP length: 117
effective length of query: 182
effective length of database: 128,434,387
effective search space: 23375058434
effective search space used: 23375058434
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)