Query 022329
Match_columns 299
No_of_seqs 201 out of 1752
Neff 8.4
Searched_HMMs 46136
Date Fri Mar 29 02:42:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022329.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/022329hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02555 limonoid glucosyltran 100.0 3.9E-56 8.5E-61 424.7 30.0 284 1-289 179-470 (480)
2 PLN02207 UDP-glycosyltransfera 100.0 4.2E-56 9E-61 422.9 28.9 274 2-289 182-466 (468)
3 PLN02410 UDP-glucoronosyl/UDP- 100.0 7.8E-56 1.7E-60 420.7 29.3 275 2-288 173-450 (451)
4 PLN02173 UDP-glucosyl transfer 100.0 1E-54 2.2E-59 411.9 28.3 279 1-287 159-447 (449)
5 PLN03015 UDP-glucosyl transfer 100.0 2.2E-54 4.8E-59 410.1 27.5 272 1-287 172-467 (470)
6 PLN02992 coniferyl-alcohol glu 100.0 4.2E-54 9.1E-59 410.1 27.5 272 2-288 169-469 (481)
7 PLN02152 indole-3-acetate beta 100.0 9.9E-54 2.1E-58 405.7 28.0 281 1-286 160-454 (455)
8 PLN00164 glucosyltransferase; 100.0 1E-53 2.2E-58 409.7 28.0 278 1-290 174-475 (480)
9 PLN02562 UDP-glycosyltransfera 100.0 2.4E-53 5.1E-58 404.3 28.7 270 2-286 172-447 (448)
10 PLN02210 UDP-glucosyl transfer 100.0 6.3E-53 1.4E-57 401.9 28.8 280 2-287 167-454 (456)
11 PLN02167 UDP-glycosyltransfera 100.0 9.4E-53 2E-57 403.3 27.5 275 3-290 187-474 (475)
12 PLN02554 UDP-glycosyltransfera 100.0 1.1E-52 2.5E-57 403.3 27.2 273 3-289 182-479 (481)
13 PLN02863 UDP-glucoronosyl/UDP- 100.0 3.1E-52 6.7E-57 398.6 27.7 284 2-289 181-472 (477)
14 PLN03004 UDP-glycosyltransfera 100.0 1.6E-52 3.6E-57 397.0 24.2 263 1-277 176-450 (451)
15 PLN02534 UDP-glycosyltransfera 100.0 1.5E-51 3.2E-56 393.9 27.6 280 4-290 187-488 (491)
16 PLN02764 glycosyltransferase f 100.0 2.2E-51 4.8E-56 388.4 28.0 271 4-290 166-447 (453)
17 PLN02670 transferase, transfer 100.0 7.3E-51 1.6E-55 387.4 26.8 276 4-290 182-467 (472)
18 PLN02208 glycosyltransferase f 100.0 1.7E-50 3.8E-55 383.2 26.9 265 4-288 165-439 (442)
19 PLN02448 UDP-glycosyltransfera 100.0 4.4E-50 9.5E-55 383.8 28.0 273 2-289 177-458 (459)
20 PLN03007 UDP-glucosyltransfera 100.0 5.7E-50 1.2E-54 384.9 28.3 268 20-289 202-481 (482)
21 PLN00414 glycosyltransferase f 100.0 1.1E-49 2.3E-54 378.2 26.2 254 24-291 181-443 (446)
22 PF00201 UDPGT: UDP-glucoronos 100.0 1.8E-42 3.9E-47 335.4 10.6 219 34-290 225-445 (500)
23 PHA03392 egt ecdysteroid UDP-g 100.0 2.1E-40 4.5E-45 319.8 23.1 224 31-290 241-468 (507)
24 KOG1192 UDP-glucuronosyl and U 100.0 5.3E-35 1.1E-39 282.7 19.6 226 34-288 223-455 (496)
25 TIGR01426 MGT glycosyltransfer 100.0 1.3E-27 2.9E-32 224.7 20.7 207 38-287 182-390 (392)
26 COG1819 Glycosyl transferases, 100.0 2E-27 4.3E-32 223.9 17.8 166 103-290 236-402 (406)
27 cd03784 GT1_Gtf_like This fami 99.9 8.6E-25 1.9E-29 206.0 15.6 171 91-285 228-400 (401)
28 PRK12446 undecaprenyldiphospho 99.6 1.1E-14 2.5E-19 135.2 16.4 145 101-260 182-335 (352)
29 COG0707 MurG UDP-N-acetylgluco 99.5 6.1E-13 1.3E-17 123.2 14.6 147 103-261 182-338 (357)
30 PF04101 Glyco_tran_28_C: Glyc 99.5 8.4E-16 1.8E-20 127.8 -4.0 136 106-249 1-145 (167)
31 PF13528 Glyco_trans_1_3: Glyc 99.4 8E-13 1.7E-17 120.7 11.1 121 103-245 191-317 (318)
32 TIGR00661 MJ1255 conserved hyp 99.4 1.4E-12 3E-17 119.7 11.9 122 104-249 188-315 (321)
33 PRK00726 murG undecaprenyldiph 99.2 5.8E-10 1.3E-14 103.5 14.3 84 163-249 236-325 (357)
34 cd03785 GT1_MurG MurG is an N- 99.1 4.9E-09 1.1E-13 96.7 18.5 136 103-249 180-325 (350)
35 PRK13609 diacylglycerol glucos 99.1 1.7E-08 3.7E-13 94.5 21.2 133 103-249 201-339 (380)
36 PLN02605 monogalactosyldiacylg 99.1 3.3E-08 7.2E-13 92.9 22.7 135 102-248 204-347 (382)
37 PRK13608 diacylglycerol glucos 99.0 2.4E-08 5.2E-13 94.2 17.6 144 103-260 201-351 (391)
38 TIGR03590 PseG pseudaminic aci 98.8 4.1E-08 8.9E-13 88.4 12.0 103 105-218 171-278 (279)
39 TIGR03492 conserved hypothetic 98.8 5.5E-07 1.2E-11 85.1 19.0 178 34-249 159-365 (396)
40 TIGR01133 murG undecaprenyldip 98.8 1.6E-07 3.4E-12 86.6 14.8 76 171-249 243-322 (348)
41 TIGR00215 lpxB lipid-A-disacch 98.6 3E-07 6.4E-12 86.7 11.8 164 102-278 189-378 (385)
42 PRK00025 lpxB lipid-A-disaccha 98.5 1.1E-06 2.3E-11 82.2 12.7 106 173-288 256-376 (380)
43 COG4671 Predicted glycosyl tra 98.4 5.8E-06 1.3E-10 75.0 13.3 183 36-249 168-366 (400)
44 cd03814 GT1_like_2 This family 98.3 0.00018 3.9E-09 65.4 21.7 128 105-249 197-333 (364)
45 KOG3349 Predicted glycosyltran 98.2 1.4E-05 3.1E-10 63.9 8.7 128 105-244 4-143 (170)
46 cd03804 GT1_wbaZ_like This fam 98.1 6.9E-05 1.5E-09 69.0 14.7 126 108-249 198-327 (351)
47 cd04946 GT1_AmsK_like This fam 98.1 0.00059 1.3E-08 64.7 20.1 95 162-261 289-391 (407)
48 cd03798 GT1_wlbH_like This fam 98.0 0.0031 6.8E-08 56.8 21.9 84 161-250 258-346 (377)
49 cd03801 GT1_YqgM_like This fam 98.0 0.0034 7.4E-08 56.3 21.9 82 160-249 254-342 (374)
50 PRK05749 3-deoxy-D-manno-octul 97.9 0.0022 4.7E-08 61.0 20.9 93 164-262 304-403 (425)
51 cd03795 GT1_like_4 This family 97.9 0.00025 5.4E-09 64.7 13.2 142 105-262 191-347 (357)
52 cd03822 GT1_ecORF704_like This 97.9 0.0023 4.9E-08 58.3 19.2 94 161-261 246-348 (366)
53 cd03799 GT1_amsK_like This is 97.9 0.0016 3.5E-08 59.3 18.0 94 161-260 235-340 (355)
54 PF13844 Glyco_transf_41: Glyc 97.9 0.0004 8.7E-09 66.5 14.2 140 103-249 283-431 (468)
55 cd03823 GT1_ExpE7_like This fa 97.8 0.0014 3E-08 59.3 16.5 133 103-249 189-330 (359)
56 PLN02871 UDP-sulfoquinovose:DA 97.8 0.0079 1.7E-07 58.0 22.5 138 106-261 264-414 (465)
57 PRK15484 lipopolysaccharide 1, 97.8 0.0018 4E-08 60.7 17.5 93 160-259 255-355 (380)
58 cd03794 GT1_wbuB_like This fam 97.7 0.00055 1.2E-08 62.3 12.9 146 103-262 218-380 (394)
59 cd03808 GT1_cap1E_like This fa 97.7 0.0044 9.5E-08 55.7 18.7 146 103-261 186-343 (359)
60 cd03786 GT1_UDP-GlcNAc_2-Epime 97.7 0.0003 6.6E-09 65.1 11.2 134 103-249 197-338 (363)
61 cd03817 GT1_UGDG_like This fam 97.7 0.00078 1.7E-08 61.1 13.6 95 161-264 258-360 (374)
62 TIGR00236 wecB UDP-N-acetylglu 97.7 0.00087 1.9E-08 62.4 13.8 128 105-249 198-335 (365)
63 PF00534 Glycos_transf_1: Glyc 97.7 0.0011 2.3E-08 54.5 12.7 82 160-249 71-159 (172)
64 cd04949 GT1_gtfA_like This fam 97.7 0.0024 5.3E-08 59.2 16.5 99 161-264 260-362 (372)
65 PRK09922 UDP-D-galactose:(gluc 97.7 0.0015 3.3E-08 60.6 14.6 147 105-264 180-343 (359)
66 cd03820 GT1_amsD_like This fam 97.6 0.0087 1.9E-07 53.5 18.6 93 161-260 234-332 (348)
67 PRK15427 colanic acid biosynth 97.6 0.0045 9.7E-08 58.8 17.2 92 161-260 278-384 (406)
68 PRK14089 ipid-A-disaccharide s 97.6 0.0027 5.9E-08 58.9 15.3 214 31-264 72-331 (347)
69 cd03825 GT1_wcfI_like This fam 97.6 0.0033 7E-08 57.5 15.9 94 160-261 242-344 (365)
70 cd05844 GT1_like_7 Glycosyltra 97.6 0.00087 1.9E-08 61.7 12.0 92 161-260 244-349 (367)
71 cd03800 GT1_Sucrose_synthase T 97.6 0.0035 7.6E-08 58.2 16.1 93 161-261 282-382 (398)
72 cd03821 GT1_Bme6_like This fam 97.5 0.0023 5E-08 58.0 13.7 93 161-261 261-359 (375)
73 KOG4626 O-linked N-acetylgluco 97.4 0.0042 9.1E-08 60.6 14.0 137 103-248 757-904 (966)
74 cd04962 GT1_like_5 This family 97.4 0.01 2.2E-07 54.7 16.0 144 105-261 197-350 (371)
75 PRK10307 putative glycosyl tra 97.3 0.016 3.6E-07 54.7 17.5 142 105-262 229-388 (412)
76 cd04950 GT1_like_1 Glycosyltra 97.3 0.022 4.8E-07 53.3 17.9 183 30-249 148-341 (373)
77 TIGR03088 stp2 sugar transfera 97.3 0.0063 1.4E-07 56.5 13.9 91 162-260 255-351 (374)
78 cd03807 GT1_WbnK_like This fam 97.3 0.0084 1.8E-07 54.0 14.4 79 161-249 250-333 (365)
79 cd03809 GT1_mtfB_like This fam 97.3 0.025 5.3E-07 51.4 17.6 82 160-249 251-337 (365)
80 TIGR03449 mycothiol_MshA UDP-N 97.3 0.0085 1.8E-07 56.3 14.8 93 161-261 282-382 (405)
81 PF13692 Glyco_trans_1_4: Glyc 97.3 0.0013 2.8E-08 51.8 7.9 80 161-248 52-135 (135)
82 PRK09814 beta-1,6-galactofuran 97.3 0.0024 5.2E-08 58.9 10.4 109 161-283 206-330 (333)
83 COG5017 Uncharacterized conser 97.2 0.003 6.4E-08 50.0 8.9 107 107-230 2-122 (161)
84 cd03816 GT1_ALG1_like This fam 97.2 0.0096 2.1E-07 56.6 14.5 91 162-262 294-399 (415)
85 COG3980 spsG Spore coat polysa 97.2 0.0059 1.3E-07 54.2 11.3 132 106-249 160-294 (318)
86 cd03819 GT1_WavL_like This fam 97.2 0.0071 1.5E-07 55.2 12.6 150 104-263 184-347 (355)
87 cd04951 GT1_WbdM_like This fam 97.2 0.013 2.8E-07 53.5 14.2 127 104-248 187-326 (360)
88 TIGR02472 sucr_P_syn_N sucrose 97.2 0.064 1.4E-06 51.3 19.4 83 161-249 316-407 (439)
89 TIGR02918 accessory Sec system 97.1 0.072 1.6E-06 52.0 19.7 98 161-264 375-483 (500)
90 TIGR02149 glgA_Coryne glycogen 97.1 0.014 3.1E-07 54.2 14.4 141 106-260 202-365 (388)
91 cd03805 GT1_ALG2_like This fam 97.0 0.011 2.4E-07 55.0 12.8 91 161-260 279-377 (392)
92 TIGR03087 stp1 sugar transfera 96.9 0.046 1E-06 51.4 15.6 93 161-261 279-376 (397)
93 cd03811 GT1_WabH_like This fam 96.9 0.031 6.8E-07 49.8 13.9 83 161-249 245-333 (353)
94 PF02350 Epimerase_2: UDP-N-ac 96.9 0.013 2.8E-07 54.5 11.5 194 24-248 113-318 (346)
95 cd03802 GT1_AviGT4_like This f 96.7 0.028 6E-07 50.8 12.1 129 106-248 172-308 (335)
96 cd03812 GT1_CapH_like This fam 96.7 0.044 9.5E-07 50.0 13.4 83 161-250 248-333 (358)
97 cd03818 GT1_ExpC_like This fam 96.6 0.0089 1.9E-07 56.2 8.7 93 162-260 281-379 (396)
98 cd03792 GT1_Trehalose_phosphor 96.6 0.084 1.8E-06 49.0 15.2 90 161-260 251-350 (372)
99 cd03796 GT1_PIG-A_like This fa 96.6 0.088 1.9E-06 49.5 15.0 79 161-249 249-334 (398)
100 PF02684 LpxB: Lipid-A-disacch 96.6 0.074 1.6E-06 49.9 14.1 206 44-277 140-366 (373)
101 PLN02949 transferase, transfer 96.5 0.095 2.1E-06 50.7 15.1 94 161-262 334-438 (463)
102 cd03813 GT1_like_3 This family 96.4 0.1 2.2E-06 50.5 14.6 91 161-259 353-454 (475)
103 cd04955 GT1_like_6 This family 96.3 0.11 2.4E-06 47.4 13.7 124 108-249 196-331 (363)
104 COG1519 KdtA 3-deoxy-D-manno-o 96.3 0.23 5E-06 46.8 15.6 201 34-264 176-403 (419)
105 cd03806 GT1_ALG11_like This fa 96.3 0.36 7.8E-06 46.0 17.4 79 161-249 304-393 (419)
106 TIGR02468 sucrsPsyn_pln sucros 96.1 0.17 3.7E-06 53.2 14.6 95 161-261 547-651 (1050)
107 COG3914 Spy Predicted O-linked 96.0 0.14 3.1E-06 49.8 12.7 136 102-243 427-573 (620)
108 PRK15179 Vi polysaccharide bio 95.9 0.36 7.9E-06 49.0 16.0 94 161-261 573-673 (694)
109 PRK01021 lpxB lipid-A-disaccha 95.9 0.52 1.1E-05 46.7 16.5 193 44-264 368-588 (608)
110 PF06722 DUF1205: Protein of u 95.9 0.01 2.2E-07 44.7 3.6 51 93-143 29-84 (97)
111 PHA01633 putative glycosyl tra 95.7 0.49 1.1E-05 43.8 14.6 86 160-248 199-307 (335)
112 PLN02275 transferase, transfer 95.6 0.13 2.9E-06 48.0 10.8 75 162-246 286-371 (371)
113 PRK10017 colanic acid biosynth 95.3 0.85 1.8E-05 43.7 15.3 160 96-264 226-406 (426)
114 PF13524 Glyco_trans_1_2: Glyc 95.3 0.17 3.7E-06 37.0 8.5 54 187-249 9-63 (92)
115 TIGR02095 glgA glycogen/starch 95.3 0.82 1.8E-05 44.1 15.5 131 106-247 292-436 (473)
116 PRK15490 Vi polysaccharide bio 95.3 0.8 1.7E-05 45.2 15.1 74 161-242 454-532 (578)
117 PF04007 DUF354: Protein of un 95.2 0.74 1.6E-05 42.6 14.0 138 90-246 166-308 (335)
118 PRK14098 glycogen synthase; Pr 95.0 1.1 2.5E-05 43.6 15.7 83 159-247 359-450 (489)
119 cd03791 GT1_Glycogen_synthase_ 95.0 0.81 1.7E-05 44.0 14.4 83 161-247 350-441 (476)
120 TIGR03568 NeuC_NnaA UDP-N-acet 94.9 0.3 6.5E-06 45.7 10.8 129 104-247 201-338 (365)
121 PLN02501 digalactosyldiacylgly 94.8 0.8 1.7E-05 46.3 13.9 76 163-249 602-682 (794)
122 PLN02846 digalactosyldiacylgly 93.7 4 8.7E-05 39.5 16.0 73 166-249 288-364 (462)
123 PRK00654 glgA glycogen synthas 93.7 3.9 8.5E-05 39.4 16.1 134 105-247 282-427 (466)
124 PHA01630 putative group 1 glyc 93.1 4.2 9.1E-05 37.5 14.6 77 169-248 197-294 (331)
125 TIGR02919 accessory Sec system 92.4 7.7 0.00017 37.3 15.7 138 103-264 282-425 (438)
126 TIGR03713 acc_sec_asp1 accesso 92.2 1.7 3.7E-05 42.7 11.2 90 162-264 409-505 (519)
127 COG0763 LpxB Lipid A disacchar 92.1 4.1 8.8E-05 38.2 12.9 216 35-285 136-377 (381)
128 PLN02939 transferase, transfer 91.5 9.7 0.00021 40.1 16.0 84 161-247 836-930 (977)
129 PLN02316 synthase/transferase 91.5 9.7 0.00021 40.5 16.2 113 161-282 899-1027(1036)
130 cd01635 Glycosyltransferase_GT 90.7 1.5 3.3E-05 36.4 8.2 49 161-211 160-216 (229)
131 PF06258 Mito_fiss_Elm1: Mitoc 90.3 3.1 6.8E-05 38.1 10.3 163 35-231 97-282 (311)
132 PRK10125 putative glycosyl tra 89.6 9.4 0.0002 36.2 13.4 101 120-242 256-365 (405)
133 TIGR02400 trehalose_OtsA alpha 87.6 8.7 0.00019 37.1 11.8 103 167-286 341-454 (456)
134 TIGR02193 heptsyl_trn_I lipopo 87.6 3.9 8.5E-05 37.1 9.1 138 96-246 171-319 (319)
135 COG0381 WecB UDP-N-acetylgluco 84.6 12 0.00026 35.2 10.5 89 163-264 263-354 (383)
136 PLN00142 sucrose synthase 81.2 11 0.00023 39.2 9.6 65 190-260 680-749 (815)
137 TIGR02470 sucr_synth sucrose s 81.1 12 0.00026 38.7 9.9 80 161-246 618-707 (784)
138 cd03789 GT1_LPS_heptosyltransf 77.1 7.3 0.00016 34.6 6.3 95 104-206 121-223 (279)
139 cd03788 GT1_TPS Trehalose-6-Ph 76.7 23 0.00049 34.2 10.0 73 166-249 345-428 (460)
140 COG4370 Uncharacterized protei 76.3 14 0.00031 33.7 7.7 87 166-259 299-387 (412)
141 PF06506 PrpR_N: Propionate ca 74.7 4.4 9.5E-05 33.7 4.0 70 177-247 31-123 (176)
142 cd03793 GT1_Glycogen_synthase_ 74.5 12 0.00025 37.3 7.3 76 172-249 468-553 (590)
143 PF05159 Capsule_synth: Capsul 74.5 17 0.00037 32.2 8.0 43 163-208 184-226 (269)
144 PRK14099 glycogen synthase; Pr 73.0 95 0.0021 30.2 15.4 86 161-249 349-448 (485)
145 TIGR02201 heptsyl_trn_III lipo 72.9 13 0.00027 34.2 7.0 98 103-206 180-285 (344)
146 PLN03063 alpha,alpha-trehalose 70.2 28 0.00061 36.2 9.3 99 174-288 371-477 (797)
147 PF01075 Glyco_transf_9: Glyco 68.6 12 0.00026 32.4 5.6 98 103-206 104-208 (247)
148 PF04464 Glyphos_transf: CDP-G 63.6 9.2 0.0002 35.5 4.0 112 161-282 251-366 (369)
149 PRK12446 undecaprenyldiphospho 63.1 32 0.00069 31.9 7.5 99 105-207 3-121 (352)
150 TIGR02195 heptsyl_trn_II lipop 62.8 36 0.00078 31.0 7.8 96 103-206 173-276 (334)
151 PRK14501 putative bifunctional 62.6 40 0.00087 34.6 8.7 111 165-288 345-462 (726)
152 COG0438 RfaG Glycosyltransfera 58.0 1.2E+02 0.0026 26.0 15.7 80 162-249 257-343 (381)
153 PRK10964 ADP-heptose:LPS hepto 57.1 39 0.00084 30.6 6.9 132 104-247 178-321 (322)
154 PRK10422 lipopolysaccharide co 55.4 42 0.0009 30.9 6.9 98 103-206 182-287 (352)
155 PLN02470 acetolactate synthase 53.7 1.4E+02 0.003 29.8 10.7 91 110-208 2-110 (585)
156 COG3195 Uncharacterized protei 52.9 76 0.0016 26.2 7.0 75 190-266 87-164 (176)
157 PRK10916 ADP-heptose:LPS hepto 51.2 55 0.0012 30.0 7.0 96 103-206 179-286 (348)
158 cd07025 Peptidase_S66 LD-Carbo 51.0 26 0.00056 31.5 4.6 75 115-208 44-120 (282)
159 PRK02797 4-alpha-L-fucosyltran 49.9 96 0.0021 28.5 7.9 80 162-246 206-292 (322)
160 COG0859 RfaF ADP-heptose:LPS h 49.3 53 0.0012 30.1 6.5 95 104-206 175-276 (334)
161 COG3660 Predicted nucleoside-d 48.0 2.1E+02 0.0046 25.8 11.2 93 104-206 161-271 (329)
162 COG0801 FolK 7,8-dihydro-6-hyd 47.0 41 0.00088 27.7 4.7 35 106-140 3-37 (160)
163 cd07037 TPP_PYR_MenD Pyrimidin 42.4 58 0.0013 26.7 5.0 26 183-208 63-94 (162)
164 PF00731 AIRC: AIR carboxylase 42.1 1.9E+02 0.0041 23.5 11.1 138 106-266 2-147 (150)
165 PRK04885 ppnK inorganic polyph 42.1 63 0.0014 28.9 5.6 52 182-249 37-94 (265)
166 cd07039 TPP_PYR_POX Pyrimidine 41.9 1.1E+02 0.0023 25.0 6.6 27 182-208 65-97 (164)
167 cd03412 CbiK_N Anaerobic cobal 41.2 50 0.0011 25.8 4.3 37 105-141 2-40 (127)
168 cd07062 Peptidase_S66_mccF_lik 40.6 49 0.0011 30.1 4.8 75 115-208 48-124 (308)
169 PLN02929 NADH kinase 40.2 42 0.0009 30.6 4.1 64 182-249 66-138 (301)
170 cd06533 Glyco_transf_WecG_TagA 39.7 1E+02 0.0022 25.3 6.2 98 25-142 34-133 (171)
171 cd01840 SGNH_hydrolase_yrhL_li 39.7 92 0.002 24.6 5.8 38 103-141 50-87 (150)
172 TIGR00661 MJ1255 conserved hyp 39.3 1.4E+02 0.0031 26.9 7.7 33 175-207 88-120 (321)
173 PF06180 CbiK: Cobalt chelatas 38.1 41 0.00089 30.0 3.7 38 105-142 2-42 (262)
174 COG2159 Predicted metal-depend 37.4 1.1E+02 0.0023 27.8 6.4 92 93-196 117-210 (293)
175 PF10093 DUF2331: Uncharacteri 37.3 59 0.0013 30.6 4.8 96 117-218 192-298 (374)
176 PF05693 Glycogen_syn: Glycoge 35.7 47 0.001 33.3 4.0 93 171-264 462-565 (633)
177 PF03808 Glyco_tran_WecB: Glyc 35.4 1.3E+02 0.0029 24.6 6.2 88 35-142 48-135 (172)
178 cd07035 TPP_PYR_POX_like Pyrim 34.7 1.4E+02 0.0031 23.5 6.2 26 183-208 62-93 (155)
179 PRK04539 ppnK inorganic polyph 34.3 1.2E+02 0.0025 27.6 6.1 54 178-249 68-125 (296)
180 cd07038 TPP_PYR_PDC_IPDC_like 34.2 1.1E+02 0.0024 24.8 5.5 28 181-208 60-93 (162)
181 PRK02155 ppnK NAD(+)/NADH kina 34.1 86 0.0019 28.4 5.2 54 178-249 63-120 (291)
182 PRK06718 precorrin-2 dehydroge 33.6 1.8E+02 0.0039 24.6 6.9 142 103-268 10-165 (202)
183 PRK14075 pnk inorganic polypho 32.9 1.3E+02 0.0028 26.6 6.1 52 182-249 43-95 (256)
184 PRK03372 ppnK inorganic polyph 32.8 1.1E+02 0.0023 28.0 5.6 52 182-249 74-129 (306)
185 PRK01911 ppnK inorganic polyph 32.6 1.1E+02 0.0023 27.8 5.5 54 178-249 64-121 (292)
186 PRK14077 pnk inorganic polypho 32.6 96 0.0021 28.0 5.3 54 178-249 64-121 (287)
187 PRK10353 3-methyl-adenine DNA 32.4 1.4E+02 0.003 25.3 5.8 45 205-249 22-83 (187)
188 PRK15062 hydrogenase isoenzyme 32.4 2.7E+02 0.0059 26.1 8.1 91 174-289 177-269 (364)
189 TIGR02398 gluc_glyc_Psyn gluco 32.0 5E+02 0.011 25.5 14.9 108 164-288 364-482 (487)
190 PRK02649 ppnK inorganic polyph 31.5 79 0.0017 28.8 4.6 53 181-249 69-125 (305)
191 PRK14092 2-amino-4-hydroxy-6-h 30.8 1.2E+02 0.0027 24.9 5.1 31 102-132 5-35 (163)
192 PF05225 HTH_psq: helix-turn-h 30.2 1.1E+02 0.0023 19.2 3.7 27 234-262 1-27 (45)
193 TIGR03609 S_layer_CsaB polysac 29.4 2.8E+02 0.006 24.7 7.8 99 104-208 172-277 (298)
194 PRK07710 acetolactate synthase 29.3 2.4E+02 0.0053 27.9 8.0 27 181-207 79-111 (571)
195 KOG2941 Beta-1,4-mannosyltrans 28.9 5E+02 0.011 24.5 13.0 144 103-262 253-424 (444)
196 PRK06276 acetolactate synthase 28.8 4.3E+02 0.0094 26.3 9.7 27 181-207 64-96 (586)
197 PRK08322 acetolactate synthase 28.7 2.1E+02 0.0045 28.1 7.4 27 181-207 64-96 (547)
198 PF08030 NAD_binding_6: Ferric 28.5 53 0.0012 26.0 2.7 39 105-143 3-46 (156)
199 PLN02935 Bifunctional NADH kin 28.4 1.1E+02 0.0023 30.1 5.0 53 181-249 263-319 (508)
200 TIGR02329 propionate_PrpR prop 27.4 1.7E+02 0.0036 29.0 6.3 29 180-209 54-82 (526)
201 PF04558 tRNA_synt_1c_R1: Glut 27.3 63 0.0014 26.7 2.9 27 219-249 107-133 (164)
202 PRK15424 propionate catabolism 26.9 1.8E+02 0.0038 28.9 6.4 29 180-209 64-92 (538)
203 PRK03378 ppnK inorganic polyph 26.9 1.4E+02 0.0031 27.0 5.3 52 182-249 65-120 (292)
204 KOG0853 Glycosyltransferase [C 26.5 40 0.00087 32.9 1.8 52 192-250 381-435 (495)
205 PRK01231 ppnK inorganic polyph 25.9 1.4E+02 0.003 27.1 5.1 51 183-249 65-119 (295)
206 TIGR00118 acolac_lg acetolacta 25.2 6E+02 0.013 25.0 9.9 27 181-207 65-97 (558)
207 PRK07525 sulfoacetaldehyde ace 25.1 4.6E+02 0.0099 26.1 9.1 27 181-207 69-101 (588)
208 TIGR01470 cysG_Nterm siroheme 24.9 4.3E+02 0.0093 22.4 8.4 145 103-268 9-165 (205)
209 COG0299 PurN Folate-dependent 24.9 2.1E+02 0.0046 24.4 5.6 72 120-209 66-137 (200)
210 PRK08155 acetolactate synthase 24.8 2E+02 0.0044 28.4 6.5 27 181-207 77-109 (564)
211 COG1609 PurR Transcriptional r 24.0 4.3E+02 0.0094 24.1 8.2 9 37-45 90-98 (333)
212 PF08006 DUF1700: Protein of u 23.3 3.2E+02 0.0069 22.5 6.5 43 234-276 2-44 (181)
213 PRK14076 pnk inorganic polypho 23.1 1.3E+02 0.0028 30.0 4.7 53 181-249 349-405 (569)
214 PF00289 CPSase_L_chain: Carba 23.0 2.1E+02 0.0046 21.7 4.9 71 119-197 11-89 (110)
215 PRK08673 3-deoxy-7-phosphohept 22.5 3.7E+02 0.0081 24.9 7.3 56 175-231 223-298 (335)
216 PRK03501 ppnK inorganic polyph 22.3 2.1E+02 0.0045 25.6 5.4 52 183-249 42-98 (264)
217 PRK09107 acetolactate synthase 22.2 6.6E+02 0.014 25.1 9.6 59 184-247 481-542 (595)
218 PRK04761 ppnK inorganic polyph 22.1 70 0.0015 28.2 2.4 27 182-208 27-57 (246)
219 COG3340 PepE Peptidase E [Amin 22.1 5.3E+02 0.011 22.4 8.1 45 94-139 24-68 (224)
220 PF06792 UPF0261: Uncharacteri 21.8 2.8E+02 0.0061 26.5 6.3 96 102-211 183-281 (403)
221 TIGR00173 menD 2-succinyl-5-en 21.6 1.9E+02 0.0042 27.5 5.5 25 182-206 65-95 (432)
222 cd03409 Chelatase_Class_II Cla 21.5 2.5E+02 0.0053 20.2 5.0 36 106-141 2-40 (101)
223 TIGR03457 sulphoacet_xsc sulfo 21.4 5.3E+02 0.012 25.6 8.7 27 181-207 65-97 (579)
224 PF07429 Glyco_transf_56: 4-al 21.1 6.9E+02 0.015 23.4 10.7 81 162-247 245-332 (360)
225 cd03784 GT1_Gtf_like This fami 21.1 3.8E+02 0.0081 24.7 7.3 35 106-142 3-37 (401)
226 TIGR01162 purE phosphoribosyla 20.8 3.2E+02 0.007 22.3 5.8 80 109-209 3-85 (156)
227 PRK06276 acetolactate synthase 20.5 6.3E+02 0.014 25.1 9.0 59 184-247 470-531 (586)
228 TIGR03845 sulfopyru_alph sulfo 20.3 2E+02 0.0042 23.4 4.5 26 183-208 62-92 (157)
229 PF10933 DUF2827: Protein of u 20.2 4.9E+02 0.011 24.5 7.4 86 165-265 256-348 (364)
230 TIGR03164 UHCUDC OHCU decarbox 20.2 4.8E+02 0.01 21.2 8.0 53 213-266 98-151 (157)
231 PRK13932 stationary phase surv 20.0 1.4E+02 0.003 26.6 3.8 26 184-209 108-134 (257)
No 1
>PLN02555 limonoid glucosyltransferase
Probab=100.00 E-value=3.9e-56 Score=424.68 Aligned_cols=284 Identities=35% Similarity=0.712 Sum_probs=243.5
Q ss_pred CCCCCCCCCCcccccCCCchhHHHHHHHHHhhccCccEEEEcCcccccHHHHHHHHhcCCcEEEeCCccCcchhhhhhhh
Q 022329 1 MSNIRLRDLPSFIRTTDPNEIMFDFLGSEAQNCFKSSAIIFNTFDEFEHEALEVIASKFPNIYTVGPLPLLCKQVVEAKF 80 (299)
Q Consensus 1 ~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~~~~r~~~p~v~~VGpl~~~~~~~~~~~~ 80 (299)
||+++++|||++++..++.+.++..+.+.++.+.+++++|+|||+|||++++++++...| ++.|||+.........
T Consensus 179 lp~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~a~~vlvNTf~eLE~~~~~~l~~~~~-v~~iGPl~~~~~~~~~--- 254 (480)
T PLN02555 179 MPLLKYDEIPSFLHPSSPYPFLRRAILGQYKNLDKPFCILIDTFQELEKEIIDYMSKLCP-IKPVGPLFKMAKTPNS--- 254 (480)
T ss_pred CCCcCHhhCcccccCCCCchHHHHHHHHHHHhcccCCEEEEEchHHHhHHHHHHHhhCCC-EEEeCcccCccccccc---
Confidence 467899999998865445556667777888888899999999999999999999987555 9999999754221000
Q ss_pred hcCCCCCccccchhHHhhccCCCCceEEEEeCCccccCHHHHHHHHHHHHcCCCCEEEEEcCCCCC--CCCCCCChhhhh
Q 022329 81 RSFGSSLWKEDTDCLKWLDKRDANSVVYVNYGSITVMTEQHLTEFAWGLANSKRPFLWILRPDVVM--GDSVVLPDEYFE 158 (299)
Q Consensus 81 ~~~~~~~~~~~~~~~~wl~~~~~~~vvyvs~GS~~~~~~~~~~~i~~al~~~~~~~lw~~~~~~~~--~~~~~l~~~~~~ 158 (299)
.....+++.+++|.+||+.+++++||||||||...++.+++.+++.+|+.++++|||+++..... .....+|+++.+
T Consensus 255 -~~~~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~~~~~q~~ela~~l~~~~~~flW~~~~~~~~~~~~~~~lp~~~~~ 333 (480)
T PLN02555 255 -DVKGDISKPADDCIEWLDSKPPSSVVYISFGTVVYLKQEQIDEIAYGVLNSGVSFLWVMRPPHKDSGVEPHVLPEEFLE 333 (480)
T ss_pred -cccccccccchhHHHHHhCCCCCceeEEEeccccCCCHHHHHHHHHHHHhcCCeEEEEEecCcccccchhhcCChhhhh
Confidence 00122234556899999999888999999999999999999999999999999999999843111 112357888988
Q ss_pred hhcCCeEEeeccchhhhhcCCCcCceeeccCchhhhhhhhcCcCeeeccCCcChHhHHHHHHHHhCcEEEec-----C-C
Q 022329 159 EIKDRGFIVSWCNQEQVLSHPSVGAFLTHCGWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVN-----H-D 232 (299)
Q Consensus 159 ~~~~~~~v~~w~pq~~iL~~~~v~~~ItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~-----~-~ 232 (299)
++++|+++++|+||.+||+|+++++|||||||||++||+++|||||+||+++||+.||+++++.+|+|+.+. . .
T Consensus 334 ~~~~~g~v~~W~PQ~~iL~H~~v~~FvtH~G~nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~l~~~~~~~~~ 413 (480)
T PLN02555 334 KAGDKGKIVQWCPQEKVLAHPSVACFVTHCGWNSTMEALSSGVPVVCFPQWGDQVTDAVYLVDVFKTGVRLCRGEAENKL 413 (480)
T ss_pred hcCCceEEEecCCHHHHhCCCccCeEEecCCcchHHHHHHcCCCEEeCCCccccHHHHHHHHHHhCceEEccCCccccCc
Confidence 889999999999999999999999999999999999999999999999999999999999977789999993 2 5
Q ss_pred CCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhc
Q 022329 233 VKRGDIEALVKEMMDGDEGKKMRQKAWEWKKKAEAATAVGGQSYNNFDRLVKMVLQQ 289 (299)
Q Consensus 233 ~~~~~i~~av~~vl~~~~~~~~r~~a~~l~~~~~~~~~~gg~s~~~l~~li~~l~~~ 289 (299)
+++++|.++|+++|++++|+++|+||++|++++++|+.+||||+.++.+||+.+.+.
T Consensus 414 v~~~~v~~~v~~vm~~~~g~~~r~ra~~l~~~a~~A~~egGSS~~~l~~~v~~i~~~ 470 (480)
T PLN02555 414 ITREEVAECLLEATVGEKAAELKQNALKWKEEAEAAVAEGGSSDRNFQEFVDKLVRK 470 (480)
T ss_pred CcHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHhc
Confidence 899999999999998888999999999999999999999999999999999999876
No 2
>PLN02207 UDP-glycosyltransferase
Probab=100.00 E-value=4.2e-56 Score=422.90 Aligned_cols=274 Identities=29% Similarity=0.560 Sum_probs=234.1
Q ss_pred CCCCCCCCCcccccCCCchhHHHHHHHHHhhccCccEEEEcCcccccHHHHHHHH--hcCCcEEEeCCccCcchhhhhhh
Q 022329 2 SNIRLRDLPSFIRTTDPNEIMFDFLGSEAQNCFKSSAIIFNTFDEFEHEALEVIA--SKFPNIYTVGPLPLLCKQVVEAK 79 (299)
Q Consensus 2 ~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~~~~r--~~~p~v~~VGpl~~~~~~~~~~~ 79 (299)
++++++|+|+++...+. +..+.+....+.+++++|+|||++||++++++++ +..|+++.|||++.....
T Consensus 182 ~~l~~~dlp~~~~~~~~----~~~~~~~~~~~~~~~~vlvNtf~~LE~~~~~~~~~~~~~p~v~~VGPl~~~~~~----- 252 (468)
T PLN02207 182 NPVPANVLPSALFVEDG----YDAYVKLAILFTKANGILVNSSFDIEPYSVNHFLDEQNYPSVYAVGPIFDLKAQ----- 252 (468)
T ss_pred CCCChHHCcchhcCCcc----HHHHHHHHHhcccCCEEEEEchHHHhHHHHHHHHhccCCCcEEEecCCcccccC-----
Confidence 46999999988864332 3345566667889999999999999999999995 456899999999864321
Q ss_pred hhcCCC-CCccccchhHHhhccCCCCceEEEEeCCccccCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCCCCChhhhh
Q 022329 80 FRSFGS-SLWKEDTDCLKWLDKRDANSVVYVNYGSITVMTEQHLTEFAWGLANSKRPFLWILRPDVVMGDSVVLPDEYFE 158 (299)
Q Consensus 80 ~~~~~~-~~~~~~~~~~~wl~~~~~~~vvyvs~GS~~~~~~~~~~~i~~al~~~~~~~lw~~~~~~~~~~~~~l~~~~~~ 158 (299)
+.+. .. .++++|.+|||++++++||||||||...++.+++++++.+|+.++++|||+++.... ...+.+|++|.+
T Consensus 253 --~~~~~~~-~~~~~~~~WLd~~~~~sVVyvSfGS~~~~~~~q~~ela~~l~~~~~~flW~~r~~~~-~~~~~lp~~f~e 328 (468)
T PLN02207 253 --PHPEQDL-ARRDELMKWLDDQPEASVVFLCFGSMGRLRGPLVKEIAHGLELCQYRFLWSLRTEEV-TNDDLLPEGFLD 328 (468)
T ss_pred --CCCcccc-chhhHHHHHHhcCCCCcEEEEEeccCcCCCHHHHHHHHHHHHHCCCcEEEEEeCCCc-cccccCCHHHHh
Confidence 1221 11 134579999999988999999999999999999999999999999999999985321 123468899999
Q ss_pred hhcCCeEEeeccchhhhhcCCCcCceeeccCchhhhhhhhcCcCeeeccCCcChHhHHHHHHHHhCcEEEecC-------
Q 022329 159 EIKDRGFIVSWCNQEQVLSHPSVGAFLTHCGWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNH------- 231 (299)
Q Consensus 159 ~~~~~~~v~~w~pq~~iL~~~~v~~~ItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~------- 231 (299)
++++|+++++|+||..||+|+++++|||||||||++||+++|||||+||+++||+.||+++++++|+|+++..
T Consensus 329 r~~~~g~i~~W~PQ~~IL~H~~vg~FvTH~GwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~~~~~~~~~~~ 408 (468)
T PLN02207 329 RVSGRGMICGWSPQVEILAHKAVGGFVSHCGWNSIVESLWFGVPIVTWPMYAEQQLNAFLMVKELKLAVELKLDYRVHSD 408 (468)
T ss_pred hcCCCeEEEEeCCHHHHhcccccceeeecCccccHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEEecccccccC
Confidence 9999999999999999999999999999999999999999999999999999999999988677999997731
Q ss_pred -CCCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhc
Q 022329 232 -DVKRGDIEALVKEMMDGDEGKKMRQKAWEWKKKAEAATAVGGQSYNNFDRLVKMVLQQ 289 (299)
Q Consensus 232 -~~~~~~i~~av~~vl~~~~~~~~r~~a~~l~~~~~~~~~~gg~s~~~l~~li~~l~~~ 289 (299)
.+++++|.++|+++|++ ++++||+||+++++++++|+.+||||+.++.+||+++..-
T Consensus 409 ~~v~~e~i~~av~~vm~~-~~~~~r~~a~~l~~~a~~A~~~GGSS~~~l~~~v~~~~~~ 466 (468)
T PLN02207 409 EIVNANEIETAIRCVMNK-DNNVVRKRVMDISQMIQRATKNGGSSFAAIEKFIHDVIGI 466 (468)
T ss_pred CcccHHHHHHHHHHHHhc-chHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHhc
Confidence 36999999999999974 4679999999999999999999999999999999998753
No 3
>PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=100.00 E-value=7.8e-56 Score=420.70 Aligned_cols=275 Identities=37% Similarity=0.713 Sum_probs=235.2
Q ss_pred CCCCCCCCCcccccCCCchhHHHHHHHHHhhccCccEEEEcCcccccHHHHHHHHhcC-CcEEEeCCccCcchhhhhhhh
Q 022329 2 SNIRLRDLPSFIRTTDPNEIMFDFLGSEAQNCFKSSAIIFNTFDEFEHEALEVIASKF-PNIYTVGPLPLLCKQVVEAKF 80 (299)
Q Consensus 2 ~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~~~~r~~~-p~v~~VGpl~~~~~~~~~~~~ 80 (299)
++++.+|+|.+... ....+..++.... .+.+++++|+|||+|||++++++++... +++++|||++.....
T Consensus 173 ~~~~~~dlp~~~~~--~~~~~~~~~~~~~-~~~~~~~vlvNTf~eLE~~~~~~l~~~~~~~v~~vGpl~~~~~~------ 243 (451)
T PLN02410 173 HPLRCKDFPVSHWA--SLESIMELYRNTV-DKRTASSVIINTASCLESSSLSRLQQQLQIPVYPIGPLHLVASA------ 243 (451)
T ss_pred CCCChHHCcchhcC--CcHHHHHHHHHHh-hcccCCEEEEeChHHhhHHHHHHHHhccCCCEEEecccccccCC------
Confidence 56788888876542 2223444444433 4678999999999999999999998755 589999999754321
Q ss_pred hcCCCCCccccchhHHhhccCCCCceEEEEeCCccccCHHHHHHHHHHHHcCCCCEEEEEcCCCCCC--CCCCCChhhhh
Q 022329 81 RSFGSSLWKEDTDCLKWLDKRDANSVVYVNYGSITVMTEQHLTEFAWGLANSKRPFLWILRPDVVMG--DSVVLPDEYFE 158 (299)
Q Consensus 81 ~~~~~~~~~~~~~~~~wl~~~~~~~vvyvs~GS~~~~~~~~~~~i~~al~~~~~~~lw~~~~~~~~~--~~~~l~~~~~~ 158 (299)
+.++++++.+|.+|||.+++++||||||||...++.+++.+++.||+.++++|||+++.....+ ....+|++|.+
T Consensus 244 ---~~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~~~~~q~~ela~gLe~s~~~FlWv~r~~~~~~~~~~~~lp~~f~e 320 (451)
T PLN02410 244 ---PTSLLEENKSCIEWLNKQKKNSVIFVSLGSLALMEINEVMETASGLDSSNQQFLWVIRPGSVRGSEWIESLPKEFSK 320 (451)
T ss_pred ---CccccccchHHHHHHHhCCCCcEEEEEccccccCCHHHHHHHHHHHHhcCCCeEEEEccCcccccchhhcCChhHHH
Confidence 1122334557999999998899999999999999999999999999999999999998532111 11248999999
Q ss_pred hhcCCeEEeeccchhhhhcCCCcCceeeccCchhhhhhhhcCcCeeeccCCcChHhHHHHHHHHhCcEEEecCCCCHHHH
Q 022329 159 EIKDRGFIVSWCNQEQVLSHPSVGAFLTHCGWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVKRGDI 238 (299)
Q Consensus 159 ~~~~~~~v~~w~pq~~iL~~~~v~~~ItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~i 238 (299)
++++|+++++|+||.+||+|+++++|||||||||++||+++|||||+||+++||+.||+++++.+|+|+.+...+++++|
T Consensus 321 r~~~~g~v~~w~PQ~~iL~h~~v~~fvtH~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~~~v 400 (451)
T PLN02410 321 IISGRGYIVKWAPQKEVLSHPAVGGFWSHCGWNSTLESIGEGVPMICKPFSSDQKVNARYLECVWKIGIQVEGDLDRGAV 400 (451)
T ss_pred hccCCeEEEccCCHHHHhCCCccCeeeecCchhHHHHHHHcCCCEEeccccccCHHHHHHHHHHhCeeEEeCCcccHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999996777999999778999999
Q ss_pred HHHHHHHhcCChhHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHh
Q 022329 239 EALVKEMMDGDEGKKMRQKAWEWKKKAEAATAVGGQSYNNFDRLVKMVLQ 288 (299)
Q Consensus 239 ~~av~~vl~~~~~~~~r~~a~~l~~~~~~~~~~gg~s~~~l~~li~~l~~ 288 (299)
.++|+++|.++++++||++|+++++.+++++.+||||+.++.+||+.+..
T Consensus 401 ~~av~~lm~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~fv~~~~~ 450 (451)
T PLN02410 401 ERAVKRLMVEEEGEEMRKRAISLKEQLRASVISGGSSHNSLEEFVHFMRT 450 (451)
T ss_pred HHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHh
Confidence 99999999988788999999999999999999999999999999998864
No 4
>PLN02173 UDP-glucosyl transferase family protein
Probab=100.00 E-value=1e-54 Score=411.90 Aligned_cols=279 Identities=31% Similarity=0.649 Sum_probs=235.7
Q ss_pred CCCCCCCCCCcccccCCCchhHHHHHHHHHhhccCccEEEEcCcccccHHHHHHHHhcCCcEEEeCCccCcch--hhhhh
Q 022329 1 MSNIRLRDLPSFIRTTDPNEIMFDFLGSEAQNCFKSSAIIFNTFDEFEHEALEVIASKFPNIYTVGPLPLLCK--QVVEA 78 (299)
Q Consensus 1 ~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~~~~r~~~p~v~~VGpl~~~~~--~~~~~ 78 (299)
+|+++.+|||++++..+....+..++.+.++.+.+++.+|+|||+|||++++++++.. ++++.|||+++... ...+.
T Consensus 159 ~p~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~-~~v~~VGPl~~~~~~~~~~~~ 237 (449)
T PLN02173 159 LPLLELQDLPTFVTPTGSHLAYFEMVLQQFTNFDKADFVLVNSFHDLDLHENELLSKV-CPVLTIGPTVPSMYLDQQIKS 237 (449)
T ss_pred CCCCChhhCChhhcCCCCchHHHHHHHHHHhhhccCCEEEEeCHHHhhHHHHHHHHhc-CCeeEEcccCchhhccccccc
Confidence 4678899999988754455556677777788889999999999999999999999865 46999999974311 00000
Q ss_pred hhhcCCCCCc--cccchhHHhhccCCCCceEEEEeCCccccCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCCCCChhh
Q 022329 79 KFRSFGSSLW--KEDTDCLKWLDKRDANSVVYVNYGSITVMTEQHLTEFAWGLANSKRPFLWILRPDVVMGDSVVLPDEY 156 (299)
Q Consensus 79 ~~~~~~~~~~--~~~~~~~~wl~~~~~~~vvyvs~GS~~~~~~~~~~~i~~al~~~~~~~lw~~~~~~~~~~~~~l~~~~ 156 (299)
+ +....++| .+++.|.+||+.+++++||||||||...++.+++.+++.+| .+.+|+|+++.. ....+|++|
T Consensus 238 ~-~~~~~~~~~~~~~~~c~~WLd~~~~~svvyvsfGS~~~~~~~~~~ela~gL--s~~~flWvvr~~----~~~~lp~~~ 310 (449)
T PLN02173 238 D-NDYDLNLFDLKEAALCTDWLDKRPQGSVVYIAFGSMAKLSSEQMEEIASAI--SNFSYLWVVRAS----EESKLPPGF 310 (449)
T ss_pred c-ccccccccccccchHHHHHHhcCCCCceEEEEecccccCCHHHHHHHHHHh--cCCCEEEEEecc----chhcccchH
Confidence 0 01111233 23456999999998899999999999989999999999999 677899999853 123478888
Q ss_pred hhhh-cCCeEEeeccchhhhhcCCCcCceeeccCchhhhhhhhcCcCeeeccCCcChHhHHHHHHHHhCcEEEecC----
Q 022329 157 FEEI-KDRGFIVSWCNQEQVLSHPSVGAFLTHCGWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNH---- 231 (299)
Q Consensus 157 ~~~~-~~~~~v~~w~pq~~iL~~~~v~~~ItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~---- 231 (299)
.+++ ++|+++++|+||..||+|+++++|||||||||++||+++|||||+||+++||+.||+++++.+|+|+.+..
T Consensus 311 ~~~~~~~~~~i~~W~PQ~~iL~H~~v~~FvtHcGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~~g~Gv~v~~~~~~ 390 (449)
T PLN02173 311 LETVDKDKSLVLKWSPQLQVLSNKAIGCFMTHCGWNSTMEGLSLGVPMVAMPQWTDQPMNAKYIQDVWKVGVRVKAEKES 390 (449)
T ss_pred HHhhcCCceEEeCCCCHHHHhCCCccceEEecCccchHHHHHHcCCCEEecCchhcchHHHHHHHHHhCceEEEeecccC
Confidence 8887 57899999999999999999999999999999999999999999999999999999999777899999864
Q ss_pred -CCCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHH
Q 022329 232 -DVKRGDIEALVKEMMDGDEGKKMRQKAWEWKKKAEAATAVGGQSYNNFDRLVKMVL 287 (299)
Q Consensus 232 -~~~~~~i~~av~~vl~~~~~~~~r~~a~~l~~~~~~~~~~gg~s~~~l~~li~~l~ 287 (299)
.+++++|.++|+++|++++|+++|+||+++++++++|+.+||||++++.+||+++.
T Consensus 391 ~~~~~e~v~~av~~vm~~~~~~~~r~~a~~~~~~a~~Av~~gGSS~~~l~~~v~~~~ 447 (449)
T PLN02173 391 GIAKREEIEFSIKEVMEGEKSKEMKENAGKWRDLAVKSLSEGGSTDININTFVSKIQ 447 (449)
T ss_pred CcccHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHhc
Confidence 26999999999999998889999999999999999999999999999999999874
No 5
>PLN03015 UDP-glucosyl transferase
Probab=100.00 E-value=2.2e-54 Score=410.08 Aligned_cols=272 Identities=29% Similarity=0.563 Sum_probs=232.0
Q ss_pred CCCCCCCCCCcccccCCCchhHHHHHHHHHhhccCccEEEEcCcccccHHHHHHHHhc-------CCcEEEeCCccCcch
Q 022329 1 MSNIRLRDLPSFIRTTDPNEIMFDFLGSEAQNCFKSSAIIFNTFDEFEHEALEVIASK-------FPNIYTVGPLPLLCK 73 (299)
Q Consensus 1 ~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~~~~r~~-------~p~v~~VGpl~~~~~ 73 (299)
+|+++.+|+|.+++... ...+..+.+.++.+.+++++|+|||+|||+.++++++.. .+++++|||++...
T Consensus 172 ~p~l~~~dlp~~~~~~~--~~~~~~~~~~~~~~~~a~gvlvNTf~eLE~~~~~~l~~~~~~~~~~~~~v~~VGPl~~~~- 248 (470)
T PLN03015 172 CKPVGPKELMETMLDRS--DQQYKECVRSGLEVPMSDGVLVNTWEELQGNTLAALREDMELNRVMKVPVYPIGPIVRTN- 248 (470)
T ss_pred CCCCChHHCCHhhcCCC--cHHHHHHHHHHHhcccCCEEEEechHHHhHHHHHHHHhhcccccccCCceEEecCCCCCc-
Confidence 46799999998775422 222334446677789999999999999999999999864 25699999997421
Q ss_pred hhhhhhhhcCCCCCccccchhHHhhccCCCCceEEEEeCCccccCHHHHHHHHHHHHcCCCCEEEEEcCCCC--------
Q 022329 74 QVVEAKFRSFGSSLWKEDTDCLKWLDKRDANSVVYVNYGSITVMTEQHLTEFAWGLANSKRPFLWILRPDVV-------- 145 (299)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~vvyvs~GS~~~~~~~~~~~i~~al~~~~~~~lw~~~~~~~-------- 145 (299)
... .++++|.+|||++++++||||||||...++.+++++++.+|+.++++|||+++.+..
T Consensus 249 ---------~~~---~~~~~~~~WLd~~~~~sVvyvsFGS~~~~~~~q~~ela~gl~~s~~~FlWv~r~~~~~~~~~~~~ 316 (470)
T PLN03015 249 ---------VHV---EKRNSIFEWLDKQGERSVVYVCLGSGGTLTFEQTVELAWGLELSGQRFVWVLRRPASYLGASSSD 316 (470)
T ss_pred ---------ccc---cchHHHHHHHHhCCCCCEEEEECCcCCcCCHHHHHHHHHHHHhCCCcEEEEEecCcccccccccc
Confidence 000 123479999999988999999999999999999999999999999999999974311
Q ss_pred -CCCCCCCChhhhhhhcCCeEE-eeccchhhhhcCCCcCceeeccCchhhhhhhhcCcCeeeccCCcChHhHHHHHHHHh
Q 022329 146 -MGDSVVLPDEYFEEIKDRGFI-VSWCNQEQVLSHPSVGAFLTHCGWNSTMESICGGVPVICWPFFAEQQTNCRYACTTW 223 (299)
Q Consensus 146 -~~~~~~l~~~~~~~~~~~~~v-~~w~pq~~iL~~~~v~~~ItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~ 223 (299)
.+....+|++|.+++.+++++ .+|+||..||+|+++++|||||||||++||+++|||||+||+++||+.||+++++.+
T Consensus 317 ~~~~~~~lp~~f~er~~~rGl~v~~W~PQ~~vL~h~~vg~fvtH~GwnS~~Eai~~GvP~v~~P~~~DQ~~na~~~~~~~ 396 (470)
T PLN03015 317 DDQVSASLPEGFLDRTRGVGLVVTQWAPQVEILSHRSIGGFLSHCGWSSVLESLTKGVPIVAWPLYAEQWMNATLLTEEI 396 (470)
T ss_pred ccchhhcCChHHHHhhccCceEEEecCCHHHHhccCccCeEEecCCchhHHHHHHcCCCEEecccccchHHHHHHHHHHh
Confidence 011235889999999888865 599999999999999999999999999999999999999999999999999998999
Q ss_pred CcEEEecC-----CCCHHHHHHHHHHHhcC--ChhHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHH
Q 022329 224 GIGMEVNH-----DVKRGDIEALVKEMMDG--DEGKKMRQKAWEWKKKAEAATAVGGQSYNNFDRLVKMVL 287 (299)
Q Consensus 224 g~G~~l~~-----~~~~~~i~~av~~vl~~--~~~~~~r~~a~~l~~~~~~~~~~gg~s~~~l~~li~~l~ 287 (299)
|+|+.+.. .+++++|+++|+++|.+ ++|+++|+||+++++++++|+.+||||+.++.+|++.+.
T Consensus 397 gvg~~~~~~~~~~~v~~e~i~~~v~~lm~~~~eeg~~~R~ra~~lk~~a~~Av~eGGSS~~nl~~~~~~~~ 467 (470)
T PLN03015 397 GVAVRTSELPSEKVIGREEVASLVRKIVAEEDEEGQKIRAKAEEVRVSSERAWSHGGSSYNSLFEWAKRCY 467 (470)
T ss_pred CeeEEecccccCCccCHHHHHHHHHHHHccCcccHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHhcc
Confidence 99999952 58999999999999963 678999999999999999999999999999999998863
No 6
>PLN02992 coniferyl-alcohol glucosyltransferase
Probab=100.00 E-value=4.2e-54 Score=410.06 Aligned_cols=272 Identities=35% Similarity=0.669 Sum_probs=232.6
Q ss_pred CCCCCCCCCcccccCCCchhHHHHHHHHHhhccCccEEEEcCcccccHHHHHHHHhc-------CCcEEEeCCccCcchh
Q 022329 2 SNIRLRDLPSFIRTTDPNEIMFDFLGSEAQNCFKSSAIIFNTFDEFEHEALEVIASK-------FPNIYTVGPLPLLCKQ 74 (299)
Q Consensus 2 ~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~~~~r~~-------~p~v~~VGpl~~~~~~ 74 (299)
|+++.+|+|.++.. +....+..+.+.+..+.+++.+|+|||+|||++++++++.. .++++.||||......
T Consensus 169 ~~l~~~dlp~~~~~--~~~~~~~~~~~~~~~~~~a~gvlvNTf~eLE~~~l~~l~~~~~~~~~~~~~v~~VGPl~~~~~~ 246 (481)
T PLN02992 169 EPVRFEDTLDAYLV--PDEPVYRDFVRHGLAYPKADGILVNTWEEMEPKSLKSLQDPKLLGRVARVPVYPIGPLCRPIQS 246 (481)
T ss_pred CccCHHHhhHhhcC--CCcHHHHHHHHHHHhcccCCEEEEechHHHhHHHHHHHhhccccccccCCceEEecCccCCcCC
Confidence 56788899975543 23345566777778888999999999999999999998752 2569999999742110
Q ss_pred hhhhhhhcCCCCCccccchhHHhhccCCCCceEEEEeCCccccCHHHHHHHHHHHHcCCCCEEEEEcCCCCC--------
Q 022329 75 VVEAKFRSFGSSLWKEDTDCLKWLDKRDANSVVYVNYGSITVMTEQHLTEFAWGLANSKRPFLWILRPDVVM-------- 146 (299)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~vvyvs~GS~~~~~~~~~~~i~~al~~~~~~~lw~~~~~~~~-------- 146 (299)
. .++++|.+|||.+++++||||||||...++.+++++++.+|+.++++|||+++.....
T Consensus 247 -----------~--~~~~~c~~wLd~~~~~sVvyvsfGS~~~l~~~q~~ela~gL~~s~~~flW~~r~~~~~~~~~~~~~ 313 (481)
T PLN02992 247 -----------S--KTDHPVLDWLNKQPNESVLYISFGSGGSLSAKQLTELAWGLEMSQQRFVWVVRPPVDGSACSAYFS 313 (481)
T ss_pred -----------C--cchHHHHHHHHcCCCCceEEEeecccccCCHHHHHHHHHHHHHcCCCEEEEEeCCccccccccccc
Confidence 0 1456799999999889999999999999999999999999999999999999743100
Q ss_pred -------C-CCCCCChhhhhhhcCCeE-EeeccchhhhhcCCCcCceeeccCchhhhhhhhcCcCeeeccCCcChHhHHH
Q 022329 147 -------G-DSVVLPDEYFEEIKDRGF-IVSWCNQEQVLSHPSVGAFLTHCGWNSTMESICGGVPVICWPFFAEQQTNCR 217 (299)
Q Consensus 147 -------~-~~~~l~~~~~~~~~~~~~-v~~w~pq~~iL~~~~v~~~ItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~ 217 (299)
. ....+|++|.+++.++++ +.+|+||.+||+|+++++|||||||||++||+++|||||+||+++||+.||+
T Consensus 314 ~~~~~~~~~~~~~lp~~f~eR~~~rg~vv~~W~PQ~~iL~h~~vg~FitH~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~ 393 (481)
T PLN02992 314 ANGGETRDNTPEYLPEGFVSRTHDRGFVVPSWAPQAEILAHQAVGGFLTHCGWSSTLESVVGGVPMIAWPLFAEQNMNAA 393 (481)
T ss_pred CcccccccchhhhCCHHHHHHhcCCCEEEeecCCHHHHhCCcccCeeEecCchhHHHHHHHcCCCEEecCccchhHHHHH
Confidence 0 123588899999887765 5699999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCcEEEecC---CCCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHh--cCCchHHHHHHHHHHHHh
Q 022329 218 YACTTWGIGMEVNH---DVKRGDIEALVKEMMDGDEGKKMRQKAWEWKKKAEAATA--VGGQSYNNFDRLVKMVLQ 288 (299)
Q Consensus 218 ~v~~~~g~G~~l~~---~~~~~~i~~av~~vl~~~~~~~~r~~a~~l~~~~~~~~~--~gg~s~~~l~~li~~l~~ 288 (299)
++++++|+|+.++. .+++++|.++|+++|++++|+++|++|+++++.+++|+. +||||+.++.+||+.+..
T Consensus 394 ~~~~~~g~gv~~~~~~~~~~~~~l~~av~~vm~~~~g~~~r~~a~~~~~~a~~Av~~~~GGSS~~~l~~~v~~~~~ 469 (481)
T PLN02992 394 LLSDELGIAVRSDDPKEVISRSKIEALVRKVMVEEEGEEMRRKVKKLRDTAEMSLSIDGGGVAHESLCRVTKECQR 469 (481)
T ss_pred HHHHHhCeeEEecCCCCcccHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHH
Confidence 99669999999975 489999999999999988888999999999999999995 599999999999999865
No 7
>PLN02152 indole-3-acetate beta-glucosyltransferase
Probab=100.00 E-value=9.9e-54 Score=405.72 Aligned_cols=281 Identities=31% Similarity=0.615 Sum_probs=231.2
Q ss_pred CCCCCCCCCCcccccCCCchhHHHHHHHHHhhccC--ccEEEEcCcccccHHHHHHHHhcCCcEEEeCCccCcchhhhhh
Q 022329 1 MSNIRLRDLPSFIRTTDPNEIMFDFLGSEAQNCFK--SSAIIFNTFDEFEHEALEVIASKFPNIYTVGPLPLLCKQVVEA 78 (299)
Q Consensus 1 ~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~ns~~~le~~~~~~~r~~~p~v~~VGpl~~~~~~~~~~ 78 (299)
+|+++.+|||++++..+..+.+..++.+.++.+.. ++.+|+|||++||+.++++++.. +++.|||+.+...... .
T Consensus 160 lp~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~l~~~--~v~~VGPL~~~~~~~~-~ 236 (455)
T PLN02152 160 LPSLEIRDLPSFLSPSNTNKAAQAVYQELMEFLKEESNPKILVNTFDSLEPEFLTAIPNI--EMVAVGPLLPAEIFTG-S 236 (455)
T ss_pred CCCCchHHCchhhcCCCCchhHHHHHHHHHHHhhhccCCEEEEeChHHhhHHHHHhhhcC--CEEEEcccCccccccc-c
Confidence 45688999999887655555556666666765543 57999999999999999999762 6999999975321000 0
Q ss_pred hhhcCCCCCccccchhHHhhccCCCCceEEEEeCCccccCHHHHHHHHHHHHcCCCCEEEEEcCCCCC-----CC---CC
Q 022329 79 KFRSFGSSLWKEDTDCLKWLDKRDANSVVYVNYGSITVMTEQHLTEFAWGLANSKRPFLWILRPDVVM-----GD---SV 150 (299)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~wl~~~~~~~vvyvs~GS~~~~~~~~~~~i~~al~~~~~~~lw~~~~~~~~-----~~---~~ 150 (299)
. ..-...+++++.+|.+|||++++++||||||||...++.+++++++.+|+.++++|||+++..... .. ..
T Consensus 237 ~-~~~~~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~l~~~q~~ela~gL~~s~~~flWv~r~~~~~~~~~~~~~~~~~ 315 (455)
T PLN02152 237 E-SGKDLSVRDQSSSYTLWLDSKTESSVIYVSFGTMVELSKKQIEELARALIEGKRPFLWVITDKLNREAKIEGEEETEI 315 (455)
T ss_pred c-cCccccccccchHHHHHhhCCCCCceEEEEecccccCCHHHHHHHHHHHHHcCCCeEEEEecCccccccccccccccc
Confidence 0 000001223456899999999889999999999999999999999999999999999999853110 00 11
Q ss_pred CCChhhhhhhcCCeEEeeccchhhhhcCCCcCceeeccCchhhhhhhhcCcCeeeccCCcChHhHHHHHHHHhCcEEEec
Q 022329 151 VLPDEYFEEIKDRGFIVSWCNQEQVLSHPSVGAFLTHCGWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVN 230 (299)
Q Consensus 151 ~l~~~~~~~~~~~~~v~~w~pq~~iL~~~~v~~~ItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~ 230 (299)
.++++|.++.++|+++++|+||.+||+|+++++|||||||||++||+++|||||+||+++||+.||+++++.+|+|+.+.
T Consensus 316 ~~~~~f~e~~~~~g~v~~W~PQ~~iL~h~~vg~fvtH~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~ 395 (455)
T PLN02152 316 EKIAGFRHELEEVGMIVSWCSQIEVLRHRAVGCFVTHCGWSSSLESLVLGVPVVAFPMWSDQPANAKLLEEIWKTGVRVR 395 (455)
T ss_pred ccchhHHHhccCCeEEEeeCCHHHHhCCcccceEEeeCCcccHHHHHHcCCCEEeccccccchHHHHHHHHHhCceEEee
Confidence 24688888899999999999999999999999999999999999999999999999999999999999966678888875
Q ss_pred C----CCCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHH
Q 022329 231 H----DVKRGDIEALVKEMMDGDEGKKMRQKAWEWKKKAEAATAVGGQSYNNFDRLVKMV 286 (299)
Q Consensus 231 ~----~~~~~~i~~av~~vl~~~~~~~~r~~a~~l~~~~~~~~~~gg~s~~~l~~li~~l 286 (299)
. .+++++|.++|+++|+++ +++||+||+++++++++++.+||+|+.++.+||+++
T Consensus 396 ~~~~~~~~~e~l~~av~~vm~~~-~~~~r~~a~~~~~~~~~a~~~ggsS~~nl~~li~~i 454 (455)
T PLN02152 396 ENSEGLVERGEIRRCLEAVMEEK-SVELRESAEKWKRLAIEAGGEGGSSDKNVEAFVKTL 454 (455)
T ss_pred cCcCCcCcHHHHHHHHHHHHhhh-HHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHh
Confidence 3 369999999999999854 668999999999999999999999999999999976
No 8
>PLN00164 glucosyltransferase; Provisional
Probab=100.00 E-value=1e-53 Score=409.74 Aligned_cols=278 Identities=31% Similarity=0.609 Sum_probs=234.4
Q ss_pred CCCCCCCCCCcccccCCCchhHHHHHHHHHhhccCccEEEEcCcccccHHHHHHHHhc-------CCcEEEeCCccCcch
Q 022329 1 MSNIRLRDLPSFIRTTDPNEIMFDFLGSEAQNCFKSSAIIFNTFDEFEHEALEVIASK-------FPNIYTVGPLPLLCK 73 (299)
Q Consensus 1 ~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~~~~r~~-------~p~v~~VGpl~~~~~ 73 (299)
+|+++.+|||.+++..+ +....++....+.+.+++.+|+|||+|||+.++++++.. .|+++.|||++....
T Consensus 174 lp~l~~~dlp~~~~~~~--~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~~~~~~~~~~~v~~vGPl~~~~~ 251 (480)
T PLN00164 174 LPPVPASSLPAPVMDKK--SPNYAWFVYHGRRFMEAAGIIVNTAAELEPGVLAAIADGRCTPGRPAPTVYPIGPVISLAF 251 (480)
T ss_pred CCCCChHHCCchhcCCC--cHHHHHHHHHHHhhhhcCEEEEechHHhhHHHHHHHHhccccccCCCCceEEeCCCccccc
Confidence 35689999998776422 223345556667788999999999999999999999864 258999999974321
Q ss_pred hhhhhhhhcCCCCCccccchhHHhhccCCCCceEEEEeCCccccCHHHHHHHHHHHHcCCCCEEEEEcCCCCC-------
Q 022329 74 QVVEAKFRSFGSSLWKEDTDCLKWLDKRDANSVVYVNYGSITVMTEQHLTEFAWGLANSKRPFLWILRPDVVM------- 146 (299)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~vvyvs~GS~~~~~~~~~~~i~~al~~~~~~~lw~~~~~~~~------- 146 (299)
. + ....++++|.+||+++++++||||||||...++.+++.+++.+|+.++++|||+++.....
T Consensus 252 ~-------~---~~~~~~~~~~~wLd~~~~~svvyvsfGS~~~~~~~q~~ela~gL~~s~~~flWv~~~~~~~~~~~~~~ 321 (480)
T PLN00164 252 T-------P---PAEQPPHECVRWLDAQPPASVVFLCFGSMGFFDAPQVREIAAGLERSGHRFLWVLRGPPAAGSRHPTD 321 (480)
T ss_pred c-------C---CCccchHHHHHHHHhCCCCceEEEEecccccCCHHHHHHHHHHHHHcCCCEEEEEcCCcccccccccc
Confidence 1 0 0112456899999999889999999999988999999999999999999999999854211
Q ss_pred -CCCCCCChhhhhhhcCCeEEe-eccchhhhhcCCCcCceeeccCchhhhhhhhcCcCeeeccCCcChHhHHHHHHHHhC
Q 022329 147 -GDSVVLPDEYFEEIKDRGFIV-SWCNQEQVLSHPSVGAFLTHCGWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWG 224 (299)
Q Consensus 147 -~~~~~l~~~~~~~~~~~~~v~-~w~pq~~iL~~~~v~~~ItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g 224 (299)
+....+|++|.+++.++++++ +|+||..||+|+++++|||||||||++||+++|||||+||+++||+.||+++++++|
T Consensus 322 ~~~~~~lp~~~~~~~~~~g~~v~~w~PQ~~iL~h~~vg~fvtH~GwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~g 401 (480)
T PLN00164 322 ADLDELLPEGFLERTKGRGLVWPTWAPQKEILAHAAVGGFVTHCGWNSVLESLWHGVPMAPWPLYAEQHLNAFELVADMG 401 (480)
T ss_pred cchhhhCChHHHHHhcCCCeEEeecCCHHHHhcCcccCeEEeecccchHHHHHHcCCCEEeCCccccchhHHHHHHHHhC
Confidence 112347889998888887765 999999999999999999999999999999999999999999999999998767899
Q ss_pred cEEEecC------CCCHHHHHHHHHHHhcCC--hhHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhcC
Q 022329 225 IGMEVNH------DVKRGDIEALVKEMMDGD--EGKKMRQKAWEWKKKAEAATAVGGQSYNNFDRLVKMVLQQG 290 (299)
Q Consensus 225 ~G~~l~~------~~~~~~i~~av~~vl~~~--~~~~~r~~a~~l~~~~~~~~~~gg~s~~~l~~li~~l~~~~ 290 (299)
+|+.+.. .+++++|.++|+++|.++ +++.+|++|+++++++++++.+||||+.++.+||+++....
T Consensus 402 vG~~~~~~~~~~~~~~~e~l~~av~~vm~~~~~~~~~~r~~a~~~~~~~~~a~~~gGSS~~~l~~~v~~~~~~~ 475 (480)
T PLN00164 402 VAVAMKVDRKRDNFVEAAELERAVRSLMGGGEEEGRKAREKAAEMKAACRKAVEEGGSSYAALQRLAREIRHGA 475 (480)
T ss_pred eEEEeccccccCCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHhcc
Confidence 9999852 269999999999999864 47899999999999999999999999999999999998754
No 9
>PLN02562 UDP-glycosyltransferase
Probab=100.00 E-value=2.4e-53 Score=404.26 Aligned_cols=270 Identities=31% Similarity=0.599 Sum_probs=229.7
Q ss_pred CCCCCCCCCcccccCCCchhHHHHHHHHHhhccCccEEEEcCcccccHHHHHHHH-----hcCCcEEEeCCccCcchhhh
Q 022329 2 SNIRLRDLPSFIRTTDPNEIMFDFLGSEAQNCFKSSAIIFNTFDEFEHEALEVIA-----SKFPNIYTVGPLPLLCKQVV 76 (299)
Q Consensus 2 ~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~~~~r-----~~~p~v~~VGpl~~~~~~~~ 76 (299)
|+++.+|+|++++........+..+.+.++.+.+++.+++|||+|||+.+++..+ +..|++++|||++......
T Consensus 172 ~~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~~~~~~~~~v~~iGpl~~~~~~~- 250 (448)
T PLN02562 172 PLLSTEDLPWLIGTPKARKARFKFWTRTLERTKSLRWILMNSFKDEEYDDVKNHQASYNNGQNPQILQIGPLHNQEATT- 250 (448)
T ss_pred CCCChhhCcchhcCCCcchHHHHHHHHHHhccccCCEEEEcChhhhCHHHHHHHHhhhccccCCCEEEecCcccccccc-
Confidence 5688899998876443343456677788888889999999999999999988765 4457899999998643210
Q ss_pred hhhhhcCCCCCccccchhHHhhccCCCCceEEEEeCCcc-ccCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCCCCChh
Q 022329 77 EAKFRSFGSSLWKEDTDCLKWLDKRDANSVVYVNYGSIT-VMTEQHLTEFAWGLANSKRPFLWILRPDVVMGDSVVLPDE 155 (299)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~wl~~~~~~~vvyvs~GS~~-~~~~~~~~~i~~al~~~~~~~lw~~~~~~~~~~~~~l~~~ 155 (299)
.-....+..+.+|.+||+++++++||||||||.. .++.+++++++.+|++++++|||+++... ...+|++
T Consensus 251 -----~~~~~~~~~~~~c~~wLd~~~~~svvyvsfGS~~~~~~~~~~~~l~~~l~~~g~~fiW~~~~~~----~~~l~~~ 321 (448)
T PLN02562 251 -----ITKPSFWEEDMSCLGWLQEQKPNSVIYISFGSWVSPIGESNVRTLALALEASGRPFIWVLNPVW----REGLPPG 321 (448)
T ss_pred -----cCCCccccchHHHHHHHhcCCCCceEEEEecccccCCCHHHHHHHHHHHHHCCCCEEEEEcCCc----hhhCCHH
Confidence 0011223345679999999988899999999985 67899999999999999999999997531 2247888
Q ss_pred hhhhhcCCeEEeeccchhhhhcCCCcCceeeccCchhhhhhhhcCcCeeeccCCcChHhHHHHHHHHhCcEEEecCCCCH
Q 022329 156 YFEEIKDRGFIVSWCNQEQVLSHPSVGAFLTHCGWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVKR 235 (299)
Q Consensus 156 ~~~~~~~~~~v~~w~pq~~iL~~~~v~~~ItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~ 235 (299)
|.++.++|+++++|+||.+||+|+++++|||||||||++||+++|||||+||+++||+.||+++++.+|+|+.+. ++++
T Consensus 322 ~~~~~~~~~~v~~w~PQ~~iL~h~~v~~fvtH~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~-~~~~ 400 (448)
T PLN02562 322 YVERVSKQGKVVSWAPQLEVLKHQAVGCYLTHCGWNSTMEAIQCQKRLLCYPVAGDQFVNCAYIVDVWKIGVRIS-GFGQ 400 (448)
T ss_pred HHHHhccCEEEEecCCHHHHhCCCccceEEecCcchhHHHHHHcCCCEEeCCcccchHHHHHHHHHHhCceeEeC-CCCH
Confidence 988999999999999999999999999999999999999999999999999999999999999965689999996 6899
Q ss_pred HHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHH
Q 022329 236 GDIEALVKEMMDGDEGKKMRQKAWEWKKKAEAATAVGGQSYNNFDRLVKMV 286 (299)
Q Consensus 236 ~~i~~av~~vl~~~~~~~~r~~a~~l~~~~~~~~~~gg~s~~~l~~li~~l 286 (299)
++|.++|+++|+|+ +||+||++++++++++ ..||||++++.+||+++
T Consensus 401 ~~l~~~v~~~l~~~---~~r~~a~~l~~~~~~~-~~gGSS~~nl~~~v~~~ 447 (448)
T PLN02562 401 KEVEEGLRKVMEDS---GMGERLMKLRERAMGE-EARLRSMMNFTTLKDEL 447 (448)
T ss_pred HHHHHHHHHHhCCH---HHHHHHHHHHHHHHhc-CCCCCHHHHHHHHHHHh
Confidence 99999999999876 8999999999998876 66799999999999986
No 10
>PLN02210 UDP-glucosyl transferase
Probab=100.00 E-value=6.3e-53 Score=401.88 Aligned_cols=280 Identities=30% Similarity=0.565 Sum_probs=229.0
Q ss_pred CCCCCCCCCcccccCCCchhHHHHHHHHHhhccCccEEEEcCcccccHHHHHHHHhcCCcEEEeCCccCcch--hhhhhh
Q 022329 2 SNIRLRDLPSFIRTTDPNEIMFDFLGSEAQNCFKSSAIIFNTFDEFEHEALEVIASKFPNIYTVGPLPLLCK--QVVEAK 79 (299)
Q Consensus 2 ~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~~~~r~~~p~v~~VGpl~~~~~--~~~~~~ 79 (299)
|+++.+|||++++.... ..+...+.+..+....++++++|||++||++++++++.. +++++|||++.... ......
T Consensus 167 ~~~~~~dl~~~~~~~~~-~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~l~~~-~~v~~VGPl~~~~~~~~~~~~~ 244 (456)
T PLN02210 167 PLLEVRDLPSFMLPSGG-AHFNNLMAEFADCLRYVKWVLVNSFYELESEIIESMADL-KPVIPIGPLVSPFLLGDDEEET 244 (456)
T ss_pred CCCChhhCChhhhcCCc-hHHHHHHHHHHHhcccCCEEEEeCHHHHhHHHHHHHhhc-CCEEEEcccCchhhcCcccccc
Confidence 56788899987764222 223233334445667889999999999999999999874 68999999974210 000000
Q ss_pred hhcCCCCCccccchhHHhhccCCCCceEEEEeCCccccCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCCCCChhhhhh
Q 022329 80 FRSFGSSLWKEDTDCLKWLDKRDANSVVYVNYGSITVMTEQHLTEFAWGLANSKRPFLWILRPDVVMGDSVVLPDEYFEE 159 (299)
Q Consensus 80 ~~~~~~~~~~~~~~~~~wl~~~~~~~vvyvs~GS~~~~~~~~~~~i~~al~~~~~~~lw~~~~~~~~~~~~~l~~~~~~~ 159 (299)
.......+|..+++|.+||+.+++++||||||||....+.+++++++.+|+.++++|||+++.... ...+..+.++
T Consensus 245 ~~~~~~~~~~~~~~~~~wld~~~~~svvyvsfGS~~~~~~~~~~e~a~~l~~~~~~flw~~~~~~~----~~~~~~~~~~ 320 (456)
T PLN02210 245 LDGKNLDMCKSDDCCMEWLDKQARSSVVYISFGSMLESLENQVETIAKALKNRGVPFLWVIRPKEK----AQNVQVLQEM 320 (456)
T ss_pred cccccccccccchHHHHHHhCCCCCceEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEEeCCcc----ccchhhHHhh
Confidence 001112345567789999999988999999999998889999999999999999999999985311 1123455555
Q ss_pred h-cCCeEEeeccchhhhhcCCCcCceeeccCchhhhhhhhcCcCeeeccCCcChHhHHHHHHHHhCcEEEecC-----CC
Q 022329 160 I-KDRGFIVSWCNQEQVLSHPSVGAFLTHCGWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNH-----DV 233 (299)
Q Consensus 160 ~-~~~~~v~~w~pq~~iL~~~~v~~~ItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~-----~~ 233 (299)
. ++++++++|+||..||+|+++++|||||||||++||+++|||||+||+++||+.||+++++.+|+|+.+.. .+
T Consensus 321 ~~~~~g~v~~w~PQ~~iL~h~~vg~FitH~G~nS~~Eai~~GVP~v~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~~~~ 400 (456)
T PLN02210 321 VKEGQGVVLEWSPQEKILSHMAISCFVTHCGWNSTIETVVAGVPVVAYPSWTDQPIDARLLVDVFGIGVRMRNDAVDGEL 400 (456)
T ss_pred ccCCCeEEEecCCHHHHhcCcCcCeEEeeCCcccHHHHHHcCCCEEecccccccHHHHHHHHHHhCeEEEEeccccCCcC
Confidence 5 48888999999999999999999999999999999999999999999999999999999555999999953 48
Q ss_pred CHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHH
Q 022329 234 KRGDIEALVKEMMDGDEGKKMRQKAWEWKKKAEAATAVGGQSYNNFDRLVKMVL 287 (299)
Q Consensus 234 ~~~~i~~av~~vl~~~~~~~~r~~a~~l~~~~~~~~~~gg~s~~~l~~li~~l~ 287 (299)
++++|+++|+++|++++|+++|+||++|++.+++|+.+||||+.++.+||+++.
T Consensus 401 ~~~~l~~av~~~m~~~~g~~~r~~a~~l~~~a~~Av~~gGSS~~~l~~~v~~~~ 454 (456)
T PLN02210 401 KVEEVERCIEAVTEGPAAADIRRRAAELKHVARLALAPGGSSARNLDLFISDIT 454 (456)
T ss_pred CHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHh
Confidence 999999999999998889999999999999999999999999999999999875
No 11
>PLN02167 UDP-glycosyltransferase family protein
Probab=100.00 E-value=9.4e-53 Score=403.33 Aligned_cols=275 Identities=28% Similarity=0.569 Sum_probs=230.8
Q ss_pred CCCCCCCCcccccCCCchhHHHHHHHHHhhccCccEEEEcCcccccHHHHHHHHhc---CCcEEEeCCccCcchhhhhhh
Q 022329 3 NIRLRDLPSFIRTTDPNEIMFDFLGSEAQNCFKSSAIIFNTFDEFEHEALEVIASK---FPNIYTVGPLPLLCKQVVEAK 79 (299)
Q Consensus 3 ~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~~~~r~~---~p~v~~VGpl~~~~~~~~~~~ 79 (299)
+++..|+|.+++.... ...+.+..+.+.+++.+|+|||++||++++++++.. .|++++|||+++......
T Consensus 187 ~l~~~dlp~~~~~~~~----~~~~~~~~~~~~~a~~vlvNTf~eLE~~~~~~l~~~~~~~p~v~~vGpl~~~~~~~~--- 259 (475)
T PLN02167 187 SVPTKVLPPGLFMKES----YEAWVEIAERFPEAKGILVNSFTELEPNAFDYFSRLPENYPPVYPVGPILSLKDRTS--- 259 (475)
T ss_pred CCChhhCchhhhCcch----HHHHHHHHHhhcccCEeeeccHHHHHHHHHHHHHhhcccCCeeEEeccccccccccC---
Confidence 4778888876654221 334556667788899999999999999999998754 478999999986432100
Q ss_pred hhcCCCCCccccchhHHhhccCCCCceEEEEeCCccccCHHHHHHHHHHHHcCCCCEEEEEcCCCCC--CCCCCCChhhh
Q 022329 80 FRSFGSSLWKEDTDCLKWLDKRDANSVVYVNYGSITVMTEQHLTEFAWGLANSKRPFLWILRPDVVM--GDSVVLPDEYF 157 (299)
Q Consensus 80 ~~~~~~~~~~~~~~~~~wl~~~~~~~vvyvs~GS~~~~~~~~~~~i~~al~~~~~~~lw~~~~~~~~--~~~~~l~~~~~ 157 (299)
..++. .++.+|.+||+.+++++||||||||...++.+++.+++.+|+.++++|||+++..... .....+|++|.
T Consensus 260 -~~~~~---~~~~~~~~wld~~~~~svvyvsfGS~~~~~~~~~~ela~~l~~~~~~flw~~~~~~~~~~~~~~~lp~~~~ 335 (475)
T PLN02167 260 -PNLDS---SDRDRIMRWLDDQPESSVVFLCFGSLGSLPAPQIKEIAQALELVGCRFLWSIRTNPAEYASPYEPLPEGFM 335 (475)
T ss_pred -CCCCc---chhHHHHHHHhcCCCCceEEEeecccccCCHHHHHHHHHHHHhCCCcEEEEEecCcccccchhhhCChHHH
Confidence 01111 1335799999999889999999999988899999999999999999999999853211 11235888999
Q ss_pred hhhcCCeEEeeccchhhhhcCCCcCceeeccCchhhhhhhhcCcCeeeccCCcChHhHHHHHHHHhCcEEEecC------
Q 022329 158 EEIKDRGFIVSWCNQEQVLSHPSVGAFLTHCGWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNH------ 231 (299)
Q Consensus 158 ~~~~~~~~v~~w~pq~~iL~~~~v~~~ItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~------ 231 (299)
+++.+++++++|+||..||+|+++++|||||||||++||+++|||||+||+++||+.||+++++++|+|+.+..
T Consensus 336 er~~~rg~v~~w~PQ~~iL~h~~vg~fvtH~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~ 415 (475)
T PLN02167 336 DRVMGRGLVCGWAPQVEILAHKAIGGFVSHCGWNSVLESLWFGVPIATWPMYAEQQLNAFTMVKELGLAVELRLDYVSAY 415 (475)
T ss_pred HHhccCeeeeccCCHHHHhcCcccCeEEeeCCcccHHHHHHcCCCEEeccccccchhhHHHHHHHhCeeEEeeccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999875589999999852
Q ss_pred --CCCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhcC
Q 022329 232 --DVKRGDIEALVKEMMDGDEGKKMRQKAWEWKKKAEAATAVGGQSYNNFDRLVKMVLQQG 290 (299)
Q Consensus 232 --~~~~~~i~~av~~vl~~~~~~~~r~~a~~l~~~~~~~~~~gg~s~~~l~~li~~l~~~~ 290 (299)
.+++++|.++|+++|.++ ++||+||+++++.+++++.+||||+.++.+||+++...+
T Consensus 416 ~~~~~~~~l~~av~~~m~~~--~~~r~~a~~~~~~~~~av~~gGsS~~~l~~~v~~i~~~~ 474 (475)
T PLN02167 416 GEIVKADEIAGAVRSLMDGE--DVPRKKVKEIAEAARKAVMDGGSSFVAVKRFIDDLLGDH 474 (475)
T ss_pred CCcccHHHHHHHHHHHhcCC--HHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhcC
Confidence 369999999999999764 389999999999999999999999999999999998754
No 12
>PLN02554 UDP-glycosyltransferase family protein
Probab=100.00 E-value=1.1e-52 Score=403.31 Aligned_cols=273 Identities=30% Similarity=0.571 Sum_probs=229.7
Q ss_pred CCCCCCCCcccccCCCchhHHHHHHHHHhhccCccEEEEcCcccccHHHHHHHHh---cCCcEEEeCCccCcchhhhhhh
Q 022329 3 NIRLRDLPSFIRTTDPNEIMFDFLGSEAQNCFKSSAIIFNTFDEFEHEALEVIAS---KFPNIYTVGPLPLLCKQVVEAK 79 (299)
Q Consensus 3 ~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~~~~r~---~~p~v~~VGpl~~~~~~~~~~~ 79 (299)
|++.+|||+++.. +.+..++.+..+.+.+++++|+|||.+||+.+.+.++. ..|++++|||+.......
T Consensus 182 pl~~~dlp~~~~~----~~~~~~~~~~~~~~~~~~gvlvNt~~eLe~~~~~~l~~~~~~~~~v~~vGpl~~~~~~~---- 253 (481)
T PLN02554 182 PYPVKCLPSVLLS----KEWLPLFLAQARRFREMKGILVNTVAELEPQALKFFSGSSGDLPPVYPVGPVLHLENSG---- 253 (481)
T ss_pred CCCHHHCCCcccC----HHHHHHHHHHHHhcccCCEEEEechHHHhHHHHHHHHhcccCCCCEEEeCCCccccccc----
Confidence 6788889877653 23456677777888899999999999999999998875 457899999994321110
Q ss_pred hhcCCCCCccccchhHHhhccCCCCceEEEEeCCccccCHHHHHHHHHHHHcCCCCEEEEEcCCCC----------CCCC
Q 022329 80 FRSFGSSLWKEDTDCLKWLDKRDANSVVYVNYGSITVMTEQHLTEFAWGLANSKRPFLWILRPDVV----------MGDS 149 (299)
Q Consensus 80 ~~~~~~~~~~~~~~~~~wl~~~~~~~vvyvs~GS~~~~~~~~~~~i~~al~~~~~~~lw~~~~~~~----------~~~~ 149 (299)
. ... ...+.+|.+||+++++++||||||||+..++.+++++++.+|+.++++|||+++.... .+..
T Consensus 254 --~-~~~-~~~~~~~~~wLd~~~~~svvyvsfGS~~~~~~~~~~~la~~l~~~~~~flW~~~~~~~~~~~~~~~~~~~~~ 329 (481)
T PLN02554 254 --D-DSK-DEKQSEILRWLDEQPPKSVVFLCFGSMGGFSEEQAREIAIALERSGHRFLWSLRRASPNIMKEPPGEFTNLE 329 (481)
T ss_pred --c-ccc-cccchHHHHHHhcCCCCcEEEEeccccccCCHHHHHHHHHHHHHcCCCeEEEEcCCcccccccccccccchh
Confidence 0 000 0133579999999988899999999998899999999999999999999999985311 0011
Q ss_pred CCCChhhhhhhcCCeEEeeccchhhhhcCCCcCceeeccCchhhhhhhhcCcCeeeccCCcChHhHHHHHHHHhCcEEEe
Q 022329 150 VVLPDEYFEEIKDRGFIVSWCNQEQVLSHPSVGAFLTHCGWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEV 229 (299)
Q Consensus 150 ~~l~~~~~~~~~~~~~v~~w~pq~~iL~~~~v~~~ItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l 229 (299)
..+|++|.++.++|+++++|+||.+||+|+++++|||||||||++||+++|||||+||+++||+.||+++++++|+|+.+
T Consensus 330 ~~lp~~~~~r~~~~g~v~~W~PQ~~iL~H~~v~~FvtH~G~nS~~Ea~~~GVP~l~~P~~~DQ~~Na~~~v~~~g~Gv~l 409 (481)
T PLN02554 330 EILPEGFLDRTKDIGKVIGWAPQVAVLAKPAIGGFVTHCGWNSILESLWFGVPMAAWPLYAEQKFNAFEMVEELGLAVEI 409 (481)
T ss_pred hhCChHHHHHhccCceEEeeCCHHHHhCCcccCcccccCccchHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEe
Confidence 23688999999999999999999999999999999999999999999999999999999999999996644999999998
Q ss_pred cC------------CCCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhc
Q 022329 230 NH------------DVKRGDIEALVKEMMDGDEGKKMRQKAWEWKKKAEAATAVGGQSYNNFDRLVKMVLQQ 289 (299)
Q Consensus 230 ~~------------~~~~~~i~~av~~vl~~~~~~~~r~~a~~l~~~~~~~~~~gg~s~~~l~~li~~l~~~ 289 (299)
.. .+++++|+++|+++|+++ ++||+||+++++++++++.+||+|..++.+||+++.+.
T Consensus 410 ~~~~~~~~~~~~~~~~~~e~l~~av~~vm~~~--~~~r~~a~~l~~~~~~av~~gGss~~~l~~lv~~~~~~ 479 (481)
T PLN02554 410 RKYWRGDLLAGEMETVTAEEIERGIRCLMEQD--SDVRKRVKEMSEKCHVALMDGGSSHTALKKFIQDVTKN 479 (481)
T ss_pred eccccccccccccCeEcHHHHHHHHHHHhcCC--HHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHhh
Confidence 52 579999999999999732 38999999999999999999999999999999998763
No 13
>PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=100.00 E-value=3.1e-52 Score=398.60 Aligned_cols=284 Identities=27% Similarity=0.498 Sum_probs=232.6
Q ss_pred CCCCCCCCCcccccCCCchhHHHHHHHHHhhccCccEEEEcCcccccHHHHHHHHhcC--CcEEEeCCccCcchhhhhhh
Q 022329 2 SNIRLRDLPSFIRTTDPNEIMFDFLGSEAQNCFKSSAIIFNTFDEFEHEALEVIASKF--PNIYTVGPLPLLCKQVVEAK 79 (299)
Q Consensus 2 ~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~~~~r~~~--p~v~~VGpl~~~~~~~~~~~ 79 (299)
++++.+|||.+++.....+.+..++.+.+.....++++|+|||++||++++++++... +++++|||++..........
T Consensus 181 ~~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~~~~~~v~~IGPL~~~~~~~~~~~ 260 (477)
T PLN02863 181 PKYPWWQISSLYRSYVEGDPAWEFIKDSFRANIASWGLVVNSFTELEGIYLEHLKKELGHDRVWAVGPILPLSGEKSGLM 260 (477)
T ss_pred CCcChHhCchhhhccCccchHHHHHHHHHhhhccCCEEEEecHHHHHHHHHHHHHhhcCCCCeEEeCCCccccccccccc
Confidence 5688899998887443444556667677766778899999999999999999998754 68999999975321000000
Q ss_pred hhcCCCCCccccchhHHhhccCCCCceEEEEeCCccccCHHHHHHHHHHHHcCCCCEEEEEcCCCCC-CCCCCCChhhhh
Q 022329 80 FRSFGSSLWKEDTDCLKWLDKRDANSVVYVNYGSITVMTEQHLTEFAWGLANSKRPFLWILRPDVVM-GDSVVLPDEYFE 158 (299)
Q Consensus 80 ~~~~~~~~~~~~~~~~~wl~~~~~~~vvyvs~GS~~~~~~~~~~~i~~al~~~~~~~lw~~~~~~~~-~~~~~l~~~~~~ 158 (299)
....+.+..+++|.+||+.+++++||||||||...++.+++++++.+|+.++++|||+++..... .....+|++|.+
T Consensus 261 --~~~~~~~~~~~~~~~WLd~~~~~svVyvsfGS~~~~~~~~~~ela~gL~~~~~~flw~~~~~~~~~~~~~~lp~~~~~ 338 (477)
T PLN02863 261 --ERGGPSSVSVDDVMTWLDTCEDHKVVYVCFGSQVVLTKEQMEALASGLEKSGVHFIWCVKEPVNEESDYSNIPSGFED 338 (477)
T ss_pred --ccCCcccccHHHHHHHHhcCCCCceEEEEeeceecCCHHHHHHHHHHHHhCCCcEEEEECCCcccccchhhCCHHHHH
Confidence 00011111356799999999889999999999998999999999999999999999999853211 112357888888
Q ss_pred hhcCCe-EEeeccchhhhhcCCCcCceeeccCchhhhhhhhcCcCeeeccCCcChHhHHHHHHHHhCcEEEecC----CC
Q 022329 159 EIKDRG-FIVSWCNQEQVLSHPSVGAFLTHCGWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNH----DV 233 (299)
Q Consensus 159 ~~~~~~-~v~~w~pq~~iL~~~~v~~~ItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~----~~ 233 (299)
++.++. ++.+|+||..||+|+++++|||||||||++||+++|||||+||+++||+.||+++++++|+|+++.. .+
T Consensus 339 r~~~~g~~v~~w~PQ~~vL~h~~v~~fvtH~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~~gvG~~~~~~~~~~~ 418 (477)
T PLN02863 339 RVAGRGLVIRGWAPQVAILSHRAVGAFLTHCGWNSVLEGLVAGVPMLAWPMAADQFVNASLLVDELKVAVRVCEGADTVP 418 (477)
T ss_pred HhccCCEEecCCCCHHHHhcCCCcCeEEecCCchHHHHHHHcCCCEEeCCccccchhhHHHHHHhhceeEEeccCCCCCc
Confidence 775544 5669999999999999999999999999999999999999999999999999998678999999953 36
Q ss_pred CHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhc
Q 022329 234 KRGDIEALVKEMMDGDEGKKMRQKAWEWKKKAEAATAVGGQSYNNFDRLVKMVLQQ 289 (299)
Q Consensus 234 ~~~~i~~av~~vl~~~~~~~~r~~a~~l~~~~~~~~~~gg~s~~~l~~li~~l~~~ 289 (299)
+++++.++|+++|.+ +++||+||+++++++++|+.+||||..++++||+.+.+.
T Consensus 419 ~~~~v~~~v~~~m~~--~~~~r~~a~~l~e~a~~Av~~gGSS~~~l~~~v~~i~~~ 472 (477)
T PLN02863 419 DSDELARVFMESVSE--NQVERERAKELRRAALDAIKERGSSVKDLDGFVKHVVEL 472 (477)
T ss_pred CHHHHHHHHHHHhhc--cHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHh
Confidence 899999999999952 459999999999999999999999999999999999764
No 14
>PLN03004 UDP-glycosyltransferase
Probab=100.00 E-value=1.6e-52 Score=396.99 Aligned_cols=263 Identities=33% Similarity=0.632 Sum_probs=221.0
Q ss_pred CCCCCCCCCCcccccCCCchhHHHHHHHHHhhccCccEEEEcCcccccHHHHHHHHhc--CCcEEEeCCccCcchhhhhh
Q 022329 1 MSNIRLRDLPSFIRTTDPNEIMFDFLGSEAQNCFKSSAIIFNTFDEFEHEALEVIASK--FPNIYTVGPLPLLCKQVVEA 78 (299)
Q Consensus 1 ~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~~~~r~~--~p~v~~VGpl~~~~~~~~~~ 78 (299)
+|+++.+|||++++..+ .....++.+....+.+++.+|+|||+|||++++++++.. .++++.||||......
T Consensus 176 ~p~l~~~dlp~~~~~~~--~~~~~~~~~~~~~~~~~~~vl~NTf~eLE~~~l~~l~~~~~~~~v~~vGPl~~~~~~---- 249 (451)
T PLN03004 176 VPPMKGSDMPKAVLERD--DEVYDVFIMFGKQLSKSSGIIINTFDALENRAIKAITEELCFRNIYPIGPLIVNGRI---- 249 (451)
T ss_pred CCCCChHHCchhhcCCc--hHHHHHHHHHHHhhcccCeeeeeeHHHhHHHHHHHHHhcCCCCCEEEEeeeccCccc----
Confidence 35688999998876422 234566677777788899999999999999999999874 2589999999742110
Q ss_pred hhhcCCCCCccccchhHHhhccCCCCceEEEEeCCccccCHHHHHHHHHHHHcCCCCEEEEEcCCCCC-----CCCCCCC
Q 022329 79 KFRSFGSSLWKEDTDCLKWLDKRDANSVVYVNYGSITVMTEQHLTEFAWGLANSKRPFLWILRPDVVM-----GDSVVLP 153 (299)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~wl~~~~~~~vvyvs~GS~~~~~~~~~~~i~~al~~~~~~~lw~~~~~~~~-----~~~~~l~ 153 (299)
.... . .++.+|.+|||++++++||||||||...++.+++++|+.+|+.++++|||+++..... .....+|
T Consensus 250 ---~~~~-~-~~~~~c~~wLd~~~~~sVvyvsfGS~~~~~~~q~~ela~gL~~s~~~FlW~~r~~~~~~~~~~~~~~~lp 324 (451)
T PLN03004 250 ---EDRN-D-NKAVSCLNWLDSQPEKSVVFLCFGSLGLFSKEQVIEIAVGLEKSGQRFLWVVRNPPELEKTELDLKSLLP 324 (451)
T ss_pred ---cccc-c-chhhHHHHHHHhCCCCceEEEEecccccCCHHHHHHHHHHHHHCCCCEEEEEcCCccccccccchhhhCC
Confidence 0000 1 1345799999999889999999999999999999999999999999999999953110 0122488
Q ss_pred hhhhhhhcCCe-EEeeccchhhhhcCCCcCceeeccCchhhhhhhhcCcCeeeccCCcChHhHHHHHHHHhCcEEEecC-
Q 022329 154 DEYFEEIKDRG-FIVSWCNQEQVLSHPSVGAFLTHCGWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNH- 231 (299)
Q Consensus 154 ~~~~~~~~~~~-~v~~w~pq~~iL~~~~v~~~ItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~- 231 (299)
++|.+++.++. ++.+|+||.+||+|+++++|||||||||++||+++|||||+||+++||+.||+++++++|+|+.++.
T Consensus 325 ~gf~er~~~~g~~v~~W~PQ~~iL~H~~v~~FvTH~G~nS~lEal~~GVP~v~~P~~~DQ~~na~~~~~~~g~g~~l~~~ 404 (451)
T PLN03004 325 EGFLSRTEDKGMVVKSWAPQVPVLNHKAVGGFVTHCGWNSILEAVCAGVPMVAWPLYAEQRFNRVMIVDEIKIAISMNES 404 (451)
T ss_pred hHHHHhccCCcEEEEeeCCHHHHhCCCccceEeccCcchHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEecCC
Confidence 89999987655 5679999999999999999999999999999999999999999999999999999667899999964
Q ss_pred ---CCCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHhcCCchHH
Q 022329 232 ---DVKRGDIEALVKEMMDGDEGKKMRQKAWEWKKKAEAATAVGGQSYN 277 (299)
Q Consensus 232 ---~~~~~~i~~av~~vl~~~~~~~~r~~a~~l~~~~~~~~~~gg~s~~ 277 (299)
.+++++|.++|+++|+++ +||+||+++++++++|+.+||||++
T Consensus 405 ~~~~~~~e~l~~av~~vm~~~---~~r~~a~~~~~~a~~Av~~GGSS~~ 450 (451)
T PLN03004 405 ETGFVSSTEVEKRVQEIIGEC---PVRERTMAMKNAAELALTETGSSHT 450 (451)
T ss_pred cCCccCHHHHHHHHHHHhcCH---HHHHHHHHHHHHHHHHhcCCCCCCC
Confidence 379999999999999876 8999999999999999999999864
No 15
>PLN02534 UDP-glycosyltransferase
Probab=100.00 E-value=1.5e-51 Score=393.89 Aligned_cols=280 Identities=34% Similarity=0.619 Sum_probs=225.5
Q ss_pred CCCCCCCcccccCCCchhHHHHHHHHHhh-ccCccEEEEcCcccccHHHHHHHHhcC-CcEEEeCCccCcchhhhhhhhh
Q 022329 4 IRLRDLPSFIRTTDPNEIMFDFLGSEAQN-CFKSSAIIFNTFDEFEHEALEVIASKF-PNIYTVGPLPLLCKQVVEAKFR 81 (299)
Q Consensus 4 ~~~~~lp~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~ns~~~le~~~~~~~r~~~-p~v~~VGpl~~~~~~~~~~~~~ 81 (299)
++.+|||++++.... .+.+.+.+.. ...++.+|+|||+|||+.++++++... ++++.|||+........+.
T Consensus 187 l~~~dlp~~~~~~~~----~~~~~~~~~~~~~~a~~vlvNTf~eLE~~~l~~l~~~~~~~v~~VGPL~~~~~~~~~~--- 259 (491)
T PLN02534 187 ITRAQLPGAFVSLPD----LDDVRNKMREAESTAFGVVVNSFNELEHGCAEAYEKAIKKKVWCVGPVSLCNKRNLDK--- 259 (491)
T ss_pred ccHHHCChhhcCccc----HHHHHHHHHhhcccCCEEEEecHHHhhHHHHHHHHhhcCCcEEEECcccccccccccc---
Confidence 788889986643211 2223333332 356789999999999999999998755 6899999997532110000
Q ss_pred cCCCCCcc-ccchhHHhhccCCCCceEEEEeCCccccCHHHHHHHHHHHHcCCCCEEEEEcCCCCC-CCC-CCCChhhhh
Q 022329 82 SFGSSLWK-EDTDCLKWLDKRDANSVVYVNYGSITVMTEQHLTEFAWGLANSKRPFLWILRPDVVM-GDS-VVLPDEYFE 158 (299)
Q Consensus 82 ~~~~~~~~-~~~~~~~wl~~~~~~~vvyvs~GS~~~~~~~~~~~i~~al~~~~~~~lw~~~~~~~~-~~~-~~l~~~~~~ 158 (299)
.-...... ++++|.+|||.+++++||||||||...+..+++.+++.+|+.++++|||+++..... +.. ..+|++|.+
T Consensus 260 ~~~~~~~~~~~~~cl~wLd~~~~~sVvyvsfGS~~~~~~~q~~e~a~gl~~~~~~flW~~r~~~~~~~~~~~~~p~gf~~ 339 (491)
T PLN02534 260 FERGNKASIDETQCLEWLDSMKPRSVIYACLGSLCRLVPSQLIELGLGLEASKKPFIWVIKTGEKHSELEEWLVKENFEE 339 (491)
T ss_pred cccCCccccchHHHHHHHhcCCCCceEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEEecCccccchhhhcCchhhHH
Confidence 00001111 345799999999889999999999999999999999999999999999999853111 111 246788887
Q ss_pred hhc-CCeEEeeccchhhhhcCCCcCceeeccCchhhhhhhhcCcCeeeccCCcChHhHHHHHHHHhCcEEEecC------
Q 022329 159 EIK-DRGFIVSWCNQEQVLSHPSVGAFLTHCGWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNH------ 231 (299)
Q Consensus 159 ~~~-~~~~v~~w~pq~~iL~~~~v~~~ItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~------ 231 (299)
++. .++++.+|+||..||+|+++++|||||||||++||+++|||||+||+++||+.||+++++.+|+|+++..
T Consensus 340 ~~~~~g~~v~~w~pq~~iL~h~~v~~fvtH~G~ns~~ea~~~GvP~v~~P~~~dq~~na~~~~e~~~vGv~~~~~~~~~~ 419 (491)
T PLN02534 340 RIKGRGLLIKGWAPQVLILSHPAIGGFLTHCGWNSTIEGICSGVPMITWPLFAEQFLNEKLIVEVLRIGVRVGVEVPVRW 419 (491)
T ss_pred hhccCCeeccCCCCHHHHhcCCccceEEecCccHHHHHHHHcCCCEEeccccccHHHHHHHHHHhhcceEEecccccccc
Confidence 764 4555679999999999999999999999999999999999999999999999999999899999998841
Q ss_pred --------CCCHHHHHHHHHHHhc--CChhHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhcC
Q 022329 232 --------DVKRGDIEALVKEMMD--GDEGKKMRQKAWEWKKKAEAATAVGGQSYNNFDRLVKMVLQQG 290 (299)
Q Consensus 232 --------~~~~~~i~~av~~vl~--~~~~~~~r~~a~~l~~~~~~~~~~gg~s~~~l~~li~~l~~~~ 290 (299)
.+++++|.++|+++|. +++|+++|+||++|++++++++.+||||+.++++||+++.+..
T Consensus 420 ~~~~~~~~~v~~eev~~~v~~~m~~~~eeg~~~R~rA~elk~~a~~Av~~GGSS~~nl~~fv~~i~~~~ 488 (491)
T PLN02534 420 GDEERVGVLVKKDEVEKAVKTLMDDGGEEGERRRRRAQELGVMARKAMELGGSSHINLSILIQDVLKQQ 488 (491)
T ss_pred cccccccCccCHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHh
Confidence 2799999999999997 5678899999999999999999999999999999999998643
No 16
>PLN02764 glycosyltransferase family protein
Probab=100.00 E-value=2.2e-51 Score=388.36 Aligned_cols=271 Identities=22% Similarity=0.408 Sum_probs=227.8
Q ss_pred CCCCCCCcccc--cCCCchhHHHHHHHHHhhccCccEEEEcCcccccHHHHHHHHhcC-CcEEEeCCccCcchhhhhhhh
Q 022329 4 IRLRDLPSFIR--TTDPNEIMFDFLGSEAQNCFKSSAIIFNTFDEFEHEALEVIASKF-PNIYTVGPLPLLCKQVVEAKF 80 (299)
Q Consensus 4 ~~~~~lp~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~~~~r~~~-p~v~~VGpl~~~~~~~~~~~~ 80 (299)
++.+|+|++.. ..+..+.+..++.+..+.+.+++.+|+|||+|||++++++++... ++++.|||++.....
T Consensus 166 l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~vlvNTf~eLE~~~~~~~~~~~~~~v~~VGPL~~~~~~------ 239 (453)
T PLN02764 166 LRKQDAYTMKNLEPTNTIDVGPNLLERVTTSLMNSDVIAIRTAREIEGNFCDYIEKHCRKKVLLTGPVFPEPDK------ 239 (453)
T ss_pred CcHhhCcchhhcCCCccchhHHHHHHHHHHhhccCCEEEEeccHHhhHHHHHHHHhhcCCcEEEeccCccCccc------
Confidence 67788887543 223334455556665577888999999999999999999998753 579999999753210
Q ss_pred hcCCCCCccccchhHHhhccCCCCceEEEEeCCccccCHHHHHHHHHHHHcCCCCEEEEEcCCCCC-CCCCCCChhhhhh
Q 022329 81 RSFGSSLWKEDTDCLKWLDKRDANSVVYVNYGSITVMTEQHLTEFAWGLANSKRPFLWILRPDVVM-GDSVVLPDEYFEE 159 (299)
Q Consensus 81 ~~~~~~~~~~~~~~~~wl~~~~~~~vvyvs~GS~~~~~~~~~~~i~~al~~~~~~~lw~~~~~~~~-~~~~~l~~~~~~~ 159 (299)
. . ..+.+|.+|||++++++||||||||...++.+++.+++.+|+..+.+|+|+++..... .....+|++|.++
T Consensus 240 -~--~---~~~~~cl~WLD~q~~~sVvyvsfGS~~~~~~~q~~ela~gL~~s~~pflwv~r~~~~~~~~~~~lp~~f~~r 313 (453)
T PLN02764 240 -T--R---ELEERWVKWLSGYEPDSVVFCALGSQVILEKDQFQELCLGMELTGSPFLVAVKPPRGSSTIQEALPEGFEER 313 (453)
T ss_pred -c--c---cchhHHHHHHhCCCCCceEEEeecccccCCHHHHHHHHHHHHhCCCCeEEEEeCCCCCcchhhhCCcchHhh
Confidence 0 0 1245799999999999999999999988999999999999999999999999953211 1134689999999
Q ss_pred hcCCeEEe-eccchhhhhcCCCcCceeeccCchhhhhhhhcCcCeeeccCCcChHhHHHHHHHHhCcEEEecC----CCC
Q 022329 160 IKDRGFIV-SWCNQEQVLSHPSVGAFLTHCGWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNH----DVK 234 (299)
Q Consensus 160 ~~~~~~v~-~w~pq~~iL~~~~v~~~ItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~----~~~ 234 (299)
++++++++ +|+||.+||+|+++++|||||||||++||+++|||||+||+++||+.||+++++.+|+|+.+.. .++
T Consensus 314 ~~grG~v~~~W~PQ~~vL~h~~v~~FvtH~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~l~~~~g~gv~~~~~~~~~~~ 393 (453)
T PLN02764 314 VKGRGVVWGGWVQQPLILSHPSVGCFVSHCGFGSMWESLLSDCQIVLVPQLGDQVLNTRLLSDELKVSVEVAREETGWFS 393 (453)
T ss_pred hccCCcEEeCCCCHHHHhcCcccCeEEecCCchHHHHHHHcCCCEEeCCcccchHHHHHHHHHHhceEEEeccccCCccC
Confidence 88888755 9999999999999999999999999999999999999999999999999999667999999853 489
Q ss_pred HHHHHHHHHHHhcC--ChhHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhcC
Q 022329 235 RGDIEALVKEMMDG--DEGKKMRQKAWEWKKKAEAATAVGGQSYNNFDRLVKMVLQQG 290 (299)
Q Consensus 235 ~~~i~~av~~vl~~--~~~~~~r~~a~~l~~~~~~~~~~gg~s~~~l~~li~~l~~~~ 290 (299)
+++|+++|+++|++ ++++++|++++++++++ .++|||..++.+||+++.+..
T Consensus 394 ~e~i~~av~~vm~~~~~~g~~~r~~a~~~~~~~----~~~GSS~~~l~~lv~~~~~~~ 447 (453)
T PLN02764 394 KESLRDAINSVMKRDSEIGNLVKKNHTKWRETL----ASPGLLTGYVDNFIESLQDLV 447 (453)
T ss_pred HHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHH----HhcCCHHHHHHHHHHHHHHhc
Confidence 99999999999987 45788999999999997 468999999999999998753
No 17
>PLN02670 transferase, transferring glycosyl groups
Probab=100.00 E-value=7.3e-51 Score=387.39 Aligned_cols=276 Identities=30% Similarity=0.489 Sum_probs=224.2
Q ss_pred CCCCCCCcccccCCCchhHHHHHHHHHhhccCccEEEEcCcccccHHHHHHHHhcC-CcEEEeCCccCcchhhhhhhhhc
Q 022329 4 IRLRDLPSFIRTTDPNEIMFDFLGSEAQNCFKSSAIIFNTFDEFEHEALEVIASKF-PNIYTVGPLPLLCKQVVEAKFRS 82 (299)
Q Consensus 4 ~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~~~~r~~~-p~v~~VGpl~~~~~~~~~~~~~~ 82 (299)
++.+|+|+++...+........+.+....+.+++++|+|||+|||+.++++++... +++++|||+........ +
T Consensus 182 ~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~gvlvNTf~eLE~~~l~~l~~~~~~~v~~VGPl~~~~~~~~-----~ 256 (472)
T PLN02670 182 FRYHEVTKYVEKTEEDETGPSDSVRFGFAIGGSDVVIIRSSPEFEPEWFDLLSDLYRKPIIPIGFLPPVIEDDE-----E 256 (472)
T ss_pred ccHHHhhHHHhccCccchHHHHHHHHHhhcccCCEEEEeCHHHHhHHHHHHHHHhhCCCeEEEecCCccccccc-----c
Confidence 55678998775433332333344455667788999999999999999999998754 68999999975311100 0
Q ss_pred CCCCCc-cccchhHHhhccCCCCceEEEEeCCccccCHHHHHHHHHHHHcCCCCEEEEEcCCCCC--CCCCCCChhhhhh
Q 022329 83 FGSSLW-KEDTDCLKWLDKRDANSVVYVNYGSITVMTEQHLTEFAWGLANSKRPFLWILRPDVVM--GDSVVLPDEYFEE 159 (299)
Q Consensus 83 ~~~~~~-~~~~~~~~wl~~~~~~~vvyvs~GS~~~~~~~~~~~i~~al~~~~~~~lw~~~~~~~~--~~~~~l~~~~~~~ 159 (299)
..... ..+++|.+|||++++++||||||||...++.+++.+++.+|+.++++|||+++..... .....+|++|.++
T Consensus 257 -~~~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~l~~~q~~ela~gl~~s~~~FlWv~r~~~~~~~~~~~~lp~~f~~~ 335 (472)
T PLN02670 257 -DDTIDVKGWVRIKEWLDKQRVNSVVYVALGTEASLRREEVTELALGLEKSETPFFWVLRNEPGTTQNALEMLPDGFEER 335 (472)
T ss_pred -ccccccchhHHHHHHHhcCCCCceEEEEecccccCCHHHHHHHHHHHHHCCCCEEEEEcCCcccccchhhcCChHHHHh
Confidence 00000 1125699999999889999999999999999999999999999999999999853211 1123589999999
Q ss_pred hcCCeEE-eeccchhhhhcCCCcCceeeccCchhhhhhhhcCcCeeeccCCcChHhHHHHHHHHhCcEEEecC-----CC
Q 022329 160 IKDRGFI-VSWCNQEQVLSHPSVGAFLTHCGWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNH-----DV 233 (299)
Q Consensus 160 ~~~~~~v-~~w~pq~~iL~~~~v~~~ItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~-----~~ 233 (299)
+.+++++ .+|+||.+||+|+++++|||||||||++||+++|||||+||+++||+.||+++ +++|+|+.+.. .+
T Consensus 336 ~~~rG~vv~~W~PQ~~IL~H~~v~~FvtHcGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v-~~~g~Gv~l~~~~~~~~~ 414 (472)
T PLN02670 336 VKGRGMIHVGWVPQVKILSHESVGGFLTHCGWNSVVEGLGFGRVLILFPVLNEQGLNTRLL-HGKKLGLEVPRDERDGSF 414 (472)
T ss_pred ccCCCeEEeCcCCHHHHhcCcccceeeecCCcchHHHHHHcCCCEEeCcchhccHHHHHHH-HHcCeeEEeeccccCCcC
Confidence 8888876 59999999999999999999999999999999999999999999999999999 78999999964 38
Q ss_pred CHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhcC
Q 022329 234 KRGDIEALVKEMMDGDEGKKMRQKAWEWKKKAEAATAVGGQSYNNFDRLVKMVLQQG 290 (299)
Q Consensus 234 ~~~~i~~av~~vl~~~~~~~~r~~a~~l~~~~~~~~~~gg~s~~~l~~li~~l~~~~ 290 (299)
++++|+++|+++|.+++|++||+||+++++.+++ .+...+.+..|++.+.+..
T Consensus 415 ~~e~i~~av~~vm~~~~g~~~r~~a~~l~~~~~~----~~~~~~~~~~~~~~l~~~~ 467 (472)
T PLN02670 415 TSDSVAESVRLAMVDDAGEEIRDKAKEMRNLFGD----MDRNNRYVDELVHYLRENR 467 (472)
T ss_pred cHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHhC----cchhHHHHHHHHHHHHHhc
Confidence 9999999999999888888999999999999763 4555667788888887754
No 18
>PLN02208 glycosyltransferase family protein
Probab=100.00 E-value=1.7e-50 Score=383.23 Aligned_cols=265 Identities=22% Similarity=0.370 Sum_probs=217.6
Q ss_pred CCCCCCCcccccCCCchhHHHHHHH-HHhhccCccEEEEcCcccccHHHHHHHHhc-CCcEEEeCCccCcchhhhhhhhh
Q 022329 4 IRLRDLPSFIRTTDPNEIMFDFLGS-EAQNCFKSSAIIFNTFDEFEHEALEVIASK-FPNIYTVGPLPLLCKQVVEAKFR 81 (299)
Q Consensus 4 ~~~~~lp~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~ns~~~le~~~~~~~r~~-~p~v~~VGpl~~~~~~~~~~~~~ 81 (299)
++.+|+|++ . ....++..+.+ ..+.+.+++.+|+|||+|||+.++++++.. .|++++|||++.....
T Consensus 165 ~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~vl~Ntf~eLE~~~~~~~~~~~~~~v~~vGpl~~~~~~------- 233 (442)
T PLN02208 165 FRENDAHAL-A---TLSIFYKRLYHQITTGLKSCDVIALRTCKEIEGKFCDYISRQYHKKVLLTGPMFPEPDT------- 233 (442)
T ss_pred cCHHHcCcc-c---ccchHHHHHHHHHHhhhccCCEEEEECHHHHHHHHHHHHHhhcCCCEEEEeecccCcCC-------
Confidence 456777754 1 12233344443 335677899999999999999999988754 4799999999854210
Q ss_pred cCCCCCccccchhHHhhccCCCCceEEEEeCCccccCHHHHHHHHHHHHcCCCCEEEEEcCCCCC-CCCCCCChhhhhhh
Q 022329 82 SFGSSLWKEDTDCLKWLDKRDANSVVYVNYGSITVMTEQHLTEFAWGLANSKRPFLWILRPDVVM-GDSVVLPDEYFEEI 160 (299)
Q Consensus 82 ~~~~~~~~~~~~~~~wl~~~~~~~vvyvs~GS~~~~~~~~~~~i~~al~~~~~~~lw~~~~~~~~-~~~~~l~~~~~~~~ 160 (299)
+.+ .+.+|.+|||.+++++||||||||...++.+++.+++.+++..+.+|+|+++..... .....+|++|.+++
T Consensus 234 --~~~---~~~~~~~wLd~~~~~sVvyvSfGS~~~l~~~q~~e~~~~l~~s~~pf~wv~r~~~~~~~~~~~lp~~f~~r~ 308 (442)
T PLN02208 234 --SKP---LEEQWSHFLSGFPPKSVVFCSLGSQIILEKDQFQELCLGMELTGLPFLIAVKPPRGSSTVQEGLPEGFEERV 308 (442)
T ss_pred --CCC---CHHHHHHHHhcCCCCcEEEEeccccccCCHHHHHHHHHHHHhCCCcEEEEEeCCCcccchhhhCCHHHHHHH
Confidence 001 245799999999889999999999998999999999999988899999999854111 11245889999988
Q ss_pred cCCeE-EeeccchhhhhcCCCcCceeeccCchhhhhhhhcCcCeeeccCCcChHhHHHHHHHHhCcEEEecC-C---CCH
Q 022329 161 KDRGF-IVSWCNQEQVLSHPSVGAFLTHCGWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNH-D---VKR 235 (299)
Q Consensus 161 ~~~~~-v~~w~pq~~iL~~~~v~~~ItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~-~---~~~ 235 (299)
.++.+ +.+|+||.+||+|+++++|||||||||++||+++|||||+||+++||+.||+++++.+|+|+.+.. + +++
T Consensus 309 ~~~g~~v~~W~PQ~~iL~H~~v~~FvtHcG~nS~~Eai~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~~~~~~~~ 388 (442)
T PLN02208 309 KGRGVVWGGWVQQPLILDHPSIGCFVNHCGPGTIWESLVSDCQMVLIPFLSDQVLFTRLMTEEFEVSVEVSREKTGWFSK 388 (442)
T ss_pred hcCCcEeeccCCHHHHhcCCccCeEEccCCchHHHHHHHcCCCEEecCcchhhHHHHHHHHHHhceeEEeccccCCcCcH
Confidence 66554 569999999999999999999999999999999999999999999999999988667999999975 2 899
Q ss_pred HHHHHHHHHHhcCC--hhHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHh
Q 022329 236 GDIEALVKEMMDGD--EGKKMRQKAWEWKKKAEAATAVGGQSYNNFDRLVKMVLQ 288 (299)
Q Consensus 236 ~~i~~av~~vl~~~--~~~~~r~~a~~l~~~~~~~~~~gg~s~~~l~~li~~l~~ 288 (299)
++|.++|+++|+++ +++++|++|+++++++. .+|+|..++.+||+.+.+
T Consensus 389 ~~l~~ai~~~m~~~~e~g~~~r~~~~~~~~~~~----~~gsS~~~l~~~v~~l~~ 439 (442)
T PLN02208 389 ESLSNAIKSVMDKDSDLGKLVRSNHTKLKEILV----SPGLLTGYVDKFVEELQE 439 (442)
T ss_pred HHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHh----cCCcHHHHHHHHHHHHHH
Confidence 99999999999764 48899999999999963 478999999999999865
No 19
>PLN02448 UDP-glycosyltransferase family protein
Probab=100.00 E-value=4.4e-50 Score=383.80 Aligned_cols=273 Identities=35% Similarity=0.614 Sum_probs=226.5
Q ss_pred CCCCCCCCCcccccCCCchhHHHHHHHHHhhccCccEEEEcCcccccHHHHHHHHhcC-CcEEEeCCccCcchhhhhhhh
Q 022329 2 SNIRLRDLPSFIRTTDPNEIMFDFLGSEAQNCFKSSAIIFNTFDEFEHEALEVIASKF-PNIYTVGPLPLLCKQVVEAKF 80 (299)
Q Consensus 2 ~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~~~~r~~~-p~v~~VGpl~~~~~~~~~~~~ 80 (299)
++++.+|+|.++... ...+...+.+.+..+.+++.+++|||+|||+.++++++... +++++|||+.........
T Consensus 177 ~~l~~~dlp~~~~~~--~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~l~~~~~~~~~~iGP~~~~~~~~~~--- 251 (459)
T PLN02448 177 SSTRLSDLPPIFHGN--SRRVLKRILEAFSWVPKAQYLLFTSFYELEAQAIDALKSKFPFPVYPIGPSIPYMELKDN--- 251 (459)
T ss_pred CCCChHHCchhhcCC--chHHHHHHHHHHhhcccCCEEEEccHHHhhHHHHHHHHhhcCCceEEecCcccccccCCC---
Confidence 457778888776532 33445566777777888999999999999999999998765 489999999753210000
Q ss_pred hcCCCCCccccchhHHhhccCCCCceEEEEeCCccccCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCCCCChhhhhhh
Q 022329 81 RSFGSSLWKEDTDCLKWLDKRDANSVVYVNYGSITVMTEQHLTEFAWGLANSKRPFLWILRPDVVMGDSVVLPDEYFEEI 160 (299)
Q Consensus 81 ~~~~~~~~~~~~~~~~wl~~~~~~~vvyvs~GS~~~~~~~~~~~i~~al~~~~~~~lw~~~~~~~~~~~~~l~~~~~~~~ 160 (299)
.........+.+|..|++.++++++|||||||....+.+++++++.+|+..+++|||+++.. ..++.++.
T Consensus 252 -~~~~~~~~~~~~~~~wl~~~~~~~vvyvsfGs~~~~~~~~~~~~~~~l~~~~~~~lw~~~~~---------~~~~~~~~ 321 (459)
T PLN02448 252 -SSSSNNEDNEPDYFQWLDSQPEGSVLYVSLGSFLSVSSAQMDEIAAGLRDSGVRFLWVARGE---------ASRLKEIC 321 (459)
T ss_pred -ccccccccchhHHHHHHcCCCCCceEEEeecccccCCHHHHHHHHHHHHhCCCCEEEEEcCc---------hhhHhHhc
Confidence 00000111234799999999889999999999988889999999999999999999988732 12444555
Q ss_pred cCCeEEeeccchhhhhcCCCcCceeeccCchhhhhhhhcCcCeeeccCCcChHhHHHHHHHHhCcEEEecC------CCC
Q 022329 161 KDRGFIVSWCNQEQVLSHPSVGAFLTHCGWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNH------DVK 234 (299)
Q Consensus 161 ~~~~~v~~w~pq~~iL~~~~v~~~ItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~------~~~ 234 (299)
++|+++++|+||..||+|+++++|||||||||++||+++|||||+||+++||+.||+++++.+|+|+.+.. .++
T Consensus 322 ~~~~~v~~w~pQ~~iL~h~~v~~fvtHgG~nS~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~~~~ 401 (459)
T PLN02448 322 GDMGLVVPWCDQLKVLCHSSVGGFWTHCGWNSTLEAVFAGVPMLTFPLFWDQPLNSKLIVEDWKIGWRVKREVGEETLVG 401 (459)
T ss_pred cCCEEEeccCCHHHHhccCccceEEecCchhHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEEecccccCCcCc
Confidence 67899999999999999999999999999999999999999999999999999999999666899999852 379
Q ss_pred HHHHHHHHHHHhcC--ChhHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhc
Q 022329 235 RGDIEALVKEMMDG--DEGKKMRQKAWEWKKKAEAATAVGGQSYNNFDRLVKMVLQQ 289 (299)
Q Consensus 235 ~~~i~~av~~vl~~--~~~~~~r~~a~~l~~~~~~~~~~gg~s~~~l~~li~~l~~~ 289 (299)
+++|+++|+++|.+ +++++||+||+++++++++++.+||||+.++++||+.+.+.
T Consensus 402 ~~~l~~av~~vl~~~~~~~~~~r~~a~~~~~~~~~a~~~gGss~~~l~~~v~~~~~~ 458 (459)
T PLN02448 402 REEIAELVKRFMDLESEEGKEMRRRAKELQEICRGAIAKGGSSDTNLDAFIRDISQG 458 (459)
T ss_pred HHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhcc
Confidence 99999999999986 46889999999999999999999999999999999999864
No 20
>PLN03007 UDP-glucosyltransferase family protein
Probab=100.00 E-value=5.7e-50 Score=384.94 Aligned_cols=268 Identities=29% Similarity=0.558 Sum_probs=221.9
Q ss_pred hhHHHHHHHHHhhccCccEEEEcCcccccHHHHHHHHhcC-CcEEEeCCccCcchhhhhhhhhcCCCCCccccchhHHhh
Q 022329 20 EIMFDFLGSEAQNCFKSSAIIFNTFDEFEHEALEVIASKF-PNIYTVGPLPLLCKQVVEAKFRSFGSSLWKEDTDCLKWL 98 (299)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~~~~r~~~-p~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl 98 (299)
..+..++.+..+.+.+++++++|||++||++++++++... .++++|||+........... ..+...+.++.+|.+||
T Consensus 202 ~~~~~~~~~~~~~~~~~~~vl~Nt~~~le~~~~~~~~~~~~~~~~~VGPl~~~~~~~~~~~--~~~~~~~~~~~~~~~wL 279 (482)
T PLN03007 202 SPMGKFMKEVRESEVKSFGVLVNSFYELESAYADFYKSFVAKRAWHIGPLSLYNRGFEEKA--ERGKKANIDEQECLKWL 279 (482)
T ss_pred hhHHHHHHHHHhhcccCCEEEEECHHHHHHHHHHHHHhccCCCEEEEcccccccccccccc--ccCCccccchhHHHHHH
Confidence 3455667777777889999999999999999999998765 47999999865322100000 00111112346799999
Q ss_pred ccCCCCceEEEEeCCccccCHHHHHHHHHHHHcCCCCEEEEEcCCCCC-CCCCCCChhhhhhhc-CCeEEeeccchhhhh
Q 022329 99 DKRDANSVVYVNYGSITVMTEQHLTEFAWGLANSKRPFLWILRPDVVM-GDSVVLPDEYFEEIK-DRGFIVSWCNQEQVL 176 (299)
Q Consensus 99 ~~~~~~~vvyvs~GS~~~~~~~~~~~i~~al~~~~~~~lw~~~~~~~~-~~~~~l~~~~~~~~~-~~~~v~~w~pq~~iL 176 (299)
+.+++++||||||||...++.+++.+++.+|+.++++|||+++..... +....+|++|.++.. .|+++.+|+||.+||
T Consensus 280 d~~~~~svvyvsfGS~~~~~~~~~~~~~~~l~~~~~~flw~~~~~~~~~~~~~~lp~~~~~r~~~~g~~v~~w~PQ~~iL 359 (482)
T PLN03007 280 DSKKPDSVIYLSFGSVASFKNEQLFEIAAGLEGSGQNFIWVVRKNENQGEKEEWLPEGFEERTKGKGLIIRGWAPQVLIL 359 (482)
T ss_pred hcCCCCceEEEeecCCcCCCHHHHHHHHHHHHHCCCCEEEEEecCCcccchhhcCCHHHHHHhccCCEEEecCCCHHHHh
Confidence 999889999999999988889999999999999999999999864211 112357888888764 566678999999999
Q ss_pred cCCCcCceeeccCchhhhhhhhcCcCeeeccCCcChHhHHHHHHHHhCcEEEec--------C-CCCHHHHHHHHHHHhc
Q 022329 177 SHPSVGAFLTHCGWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVN--------H-DVKRGDIEALVKEMMD 247 (299)
Q Consensus 177 ~~~~v~~~ItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~--------~-~~~~~~i~~av~~vl~ 247 (299)
+|+++++|||||||||++||+++|||||+||+++||+.||+++++.+++|+.+. . .+++++|.++|+++|+
T Consensus 360 ~h~~v~~fvtH~G~nS~~Eal~~GVP~v~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~l~~av~~~m~ 439 (482)
T PLN03007 360 DHQATGGFVTHCGWNSLLEGVAAGLPMVTWPVGAEQFYNEKLVTQVLRTGVSVGAKKLVKVKGDFISREKVEKAVREVIV 439 (482)
T ss_pred ccCccceeeecCcchHHHHHHHcCCCeeeccchhhhhhhHHHHHHhhcceeEeccccccccccCcccHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999866667776652 2 5899999999999999
Q ss_pred CChhHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhc
Q 022329 248 GDEGKKMRQKAWEWKKKAEAATAVGGQSYNNFDRLVKMVLQQ 289 (299)
Q Consensus 248 ~~~~~~~r~~a~~l~~~~~~~~~~gg~s~~~l~~li~~l~~~ 289 (299)
+++|++||+||+++++++++|+.+||||+.++.+||+++.+.
T Consensus 440 ~~~~~~~r~~a~~~~~~a~~a~~~gGsS~~~l~~~v~~~~~~ 481 (482)
T PLN03007 440 GEEAEERRLRAKKLAEMAKAAVEEGGSSFNDLNKFMEELNSR 481 (482)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhc
Confidence 988999999999999999999999999999999999998753
No 21
>PLN00414 glycosyltransferase family protein
Probab=100.00 E-value=1.1e-49 Score=378.25 Aligned_cols=254 Identities=23% Similarity=0.399 Sum_probs=214.6
Q ss_pred HHHHHHHhhccCccEEEEcCcccccHHHHHHHHhcC-CcEEEeCCccCcchhhhhhhhhcCCCCCccccchhHHhhccCC
Q 022329 24 DFLGSEAQNCFKSSAIIFNTFDEFEHEALEVIASKF-PNIYTVGPLPLLCKQVVEAKFRSFGSSLWKEDTDCLKWLDKRD 102 (299)
Q Consensus 24 ~~~~~~~~~~~~~~~~l~ns~~~le~~~~~~~r~~~-p~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~ 102 (299)
..+.+.++.+.+++.+|+|||+|||+.++++++... ++++.|||+...... . .. ...+++|.+|||.++
T Consensus 181 ~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~~~~~v~~VGPl~~~~~~-------~-~~--~~~~~~~~~WLD~q~ 250 (446)
T PLN00414 181 ELFGLITKGLKNCDVVSIRTCVELEGNLCDFIERQCQRKVLLTGPMLPEPQN-------K-SG--KPLEDRWNHWLNGFE 250 (446)
T ss_pred HHHHHHHHhhccCCEEEEechHHHHHHHHHHHHHhcCCCeEEEcccCCCccc-------c-cC--cccHHHHHHHHhcCC
Confidence 345566677788999999999999999999998754 579999999743210 0 00 013457999999999
Q ss_pred CCceEEEEeCCccccCHHHHHHHHHHHHcCCCCEEEEEcCCCCC-CCCCCCChhhhhhhcCCeEEe-eccchhhhhcCCC
Q 022329 103 ANSVVYVNYGSITVMTEQHLTEFAWGLANSKRPFLWILRPDVVM-GDSVVLPDEYFEEIKDRGFIV-SWCNQEQVLSHPS 180 (299)
Q Consensus 103 ~~~vvyvs~GS~~~~~~~~~~~i~~al~~~~~~~lw~~~~~~~~-~~~~~l~~~~~~~~~~~~~v~-~w~pq~~iL~~~~ 180 (299)
+++||||||||...++.+++.+++.+|+.++.+|+|+++..... .....+|++|.++++++++++ +|+||..||+|++
T Consensus 251 ~~sVvyvsfGS~~~~~~~q~~e~a~gL~~s~~~Flwvvr~~~~~~~~~~~lp~~f~~r~~~~g~vv~~w~PQ~~vL~h~~ 330 (446)
T PLN00414 251 PGSVVFCAFGTQFFFEKDQFQEFCLGMELTGLPFLIAVMPPKGSSTVQEALPEGFEERVKGRGIVWEGWVEQPLILSHPS 330 (446)
T ss_pred CCceEEEeecccccCCHHHHHHHHHHHHHcCCCeEEEEecCCCcccchhhCChhHHHHhcCCCeEEeccCCHHHHhcCCc
Confidence 99999999999999999999999999999999999999864211 123468999999999998875 9999999999999
Q ss_pred cCceeeccCchhhhhhhhcCcCeeeccCCcChHhHHHHHHHHhCcEEEecC----CCCHHHHHHHHHHHhcC--ChhHHH
Q 022329 181 VGAFLTHCGWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNH----DVKRGDIEALVKEMMDG--DEGKKM 254 (299)
Q Consensus 181 v~~~ItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~----~~~~~~i~~av~~vl~~--~~~~~~ 254 (299)
+++|||||||||++||+++|||||+||+++||+.||+++++++|+|+.+.. .+++++|+++|+++|++ ++++++
T Consensus 331 v~~fvtH~G~nS~~Ea~~~GvP~l~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~i~~~v~~~m~~~~e~g~~~ 410 (446)
T PLN00414 331 VGCFVNHCGFGSMWESLVSDCQIVFIPQLADQVLITRLLTEELEVSVKVQREDSGWFSKESLRDTVKSVMDKDSEIGNLV 410 (446)
T ss_pred cceEEecCchhHHHHHHHcCCCEEecCcccchHHHHHHHHHHhCeEEEeccccCCccCHHHHHHHHHHHhcCChhhHHHH
Confidence 999999999999999999999999999999999999999778999999964 38999999999999976 447889
Q ss_pred HHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhcCC
Q 022329 255 RQKAWEWKKKAEAATAVGGQSYNNFDRLVKMVLQQGN 291 (299)
Q Consensus 255 r~~a~~l~~~~~~~~~~gg~s~~~l~~li~~l~~~~~ 291 (299)
|++|+++++.+ ..+||+| ..+.+||+++.+...
T Consensus 411 r~~a~~~~~~~---~~~gg~s-s~l~~~v~~~~~~~~ 443 (446)
T PLN00414 411 KRNHKKLKETL---VSPGLLS-GYADKFVEALENEVN 443 (446)
T ss_pred HHHHHHHHHHH---HcCCCcH-HHHHHHHHHHHHhcc
Confidence 99999999996 4667734 338999999976543
No 22
>PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule. This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A ....
Probab=100.00 E-value=1.8e-42 Score=335.36 Aligned_cols=219 Identities=26% Similarity=0.468 Sum_probs=159.4
Q ss_pred cCccEEEEcCcccccHHHHHHHHhcCCcEEEeCCccCcchhhhhhhhhcCCCCCccccchhHHhhccCCCCceEEEEeCC
Q 022329 34 FKSSAIIFNTFDEFEHEALEVIASKFPNIYTVGPLPLLCKQVVEAKFRSFGSSLWKEDTDCLKWLDKRDANSVVYVNYGS 113 (299)
Q Consensus 34 ~~~~~~l~ns~~~le~~~~~~~r~~~p~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~vvyvs~GS 113 (299)
.+++++++|+.+.+|.| ||.+|++++||+++..+.+ ++ ..++..|++...++++|||||||
T Consensus 225 ~~~~l~l~ns~~~ld~p-----rp~~p~v~~vGgl~~~~~~-------~l-------~~~~~~~~~~~~~~~vv~vsfGs 285 (500)
T PF00201_consen 225 SNASLVLINSHPSLDFP-----RPLLPNVVEVGGLHIKPAK-------PL-------PEELWNFLDSSGKKGVVYVSFGS 285 (500)
T ss_dssp HHHHHCCSSTEEE---------HHHHCTSTTGCGC-S-----------TC-------HHHHHHHTSTTTTTEEEEEE-TS
T ss_pred HHHHHHhhhccccCcCC-----cchhhcccccCcccccccc-------cc-------ccccchhhhccCCCCEEEEecCc
Confidence 45678999998888766 9999999999999876543 22 23567899885578999999999
Q ss_pred cc-ccCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCCCCChhhhhhhcCCeEEeeccchhhhhcCCCcCceeeccCchh
Q 022329 114 IT-VMTEQHLTEFAWGLANSKRPFLWILRPDVVMGDSVVLPDEYFEEIKDRGFIVSWCNQEQVLSHPSVGAFLTHCGWNS 192 (299)
Q Consensus 114 ~~-~~~~~~~~~i~~al~~~~~~~lw~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~w~pq~~iL~~~~v~~~ItHgG~~s 192 (299)
.. .++.+..+.++++|++++++|||+++.. ..+.+++|+++++|+||.+||+||++++||||||+||
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~iW~~~~~------------~~~~l~~n~~~~~W~PQ~~lL~hp~v~~fitHgG~~s 353 (500)
T PF00201_consen 286 IVSSMPEEKLKEIAEAFENLPQRFIWKYEGE------------PPENLPKNVLIVKWLPQNDLLAHPRVKLFITHGGLNS 353 (500)
T ss_dssp SSTT-HHHHHHHHHHHHHCSTTEEEEEETCS------------HGCHHHTTEEEESS--HHHHHTSTTEEEEEES--HHH
T ss_pred ccchhHHHHHHHHHHHHhhCCCccccccccc------------ccccccceEEEeccccchhhhhcccceeeeeccccch
Confidence 85 4556668999999999999999999842 1123578999999999999999999999999999999
Q ss_pred hhhhhhcCcCeeeccCCcChHhHHHHHHHHhCcEEEecC-CCCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHhc
Q 022329 193 TMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNH-DVKRGDIEALVKEMMDGDEGKKMRQKAWEWKKKAEAATAV 271 (299)
Q Consensus 193 ~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~-~~~~~~i~~av~~vl~~~~~~~~r~~a~~l~~~~~~~~~~ 271 (299)
++||+++|||||++|+++||+.||+++ ++.|+|+.++. +++.+++.++|+++|+|+ +|++||++++..+++.
T Consensus 354 ~~Ea~~~gvP~l~~P~~~DQ~~na~~~-~~~G~g~~l~~~~~~~~~l~~ai~~vl~~~---~y~~~a~~ls~~~~~~--- 426 (500)
T PF00201_consen 354 TQEALYHGVPMLGIPLFGDQPRNAARV-EEKGVGVVLDKNDLTEEELRAAIREVLENP---SYKENAKRLSSLFRDR--- 426 (500)
T ss_dssp HHHHHHCT--EEE-GCSTTHHHHHHHH-HHTTSEEEEGGGC-SHHHHHHHHHHHHHSH---HHHHHHHHHHHTTT-----
T ss_pred hhhhhhccCCccCCCCcccCCccceEE-EEEeeEEEEEecCCcHHHHHHHHHHHHhhh---HHHHHHHHHHHHHhcC---
Confidence 999999999999999999999999999 89999999997 899999999999999987 8999999999998854
Q ss_pred CCchHHHHHHHHHHHHhcC
Q 022329 272 GGQSYNNFDRLVKMVLQQG 290 (299)
Q Consensus 272 gg~s~~~l~~li~~l~~~~ 290 (299)
.-+....+...||.+.+..
T Consensus 427 p~~p~~~~~~~ie~v~~~~ 445 (500)
T PF00201_consen 427 PISPLERAVWWIEYVARHG 445 (500)
T ss_dssp -------------------
T ss_pred CCCHHHHHHHHHHHHHhcC
Confidence 2344455577777777643
No 23
>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional
Probab=100.00 E-value=2.1e-40 Score=319.78 Aligned_cols=224 Identities=21% Similarity=0.299 Sum_probs=189.8
Q ss_pred hhccCccEEEEcCcccccHHHHHHHHhcCCcEEEeCCccCcchhhhhhhhhcCCCCCccccchhHHhhccCCCCceEEEE
Q 022329 31 QNCFKSSAIIFNTFDEFEHEALEVIASKFPNIYTVGPLPLLCKQVVEAKFRSFGSSLWKEDTDCLKWLDKRDANSVVYVN 110 (299)
Q Consensus 31 ~~~~~~~~~l~ns~~~le~~~~~~~r~~~p~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~vvyvs 110 (299)
+...+++++|+||.+.+|++ ||.+|++++|||++...... +++ ++++.+|++.+ ++++||||
T Consensus 241 ~l~~~~~l~lvns~~~~d~~-----rp~~p~v~~vGgi~~~~~~~-----~~l-------~~~l~~fl~~~-~~g~V~vS 302 (507)
T PHA03392 241 ELRNRVQLLFVNVHPVFDNN-----RPVPPSVQYLGGLHLHKKPP-----QPL-------DDYLEEFLNNS-TNGVVYVS 302 (507)
T ss_pred HHHhCCcEEEEecCccccCC-----CCCCCCeeeecccccCCCCC-----CCC-------CHHHHHHHhcC-CCcEEEEE
Confidence 44467789999998877776 99999999999998743110 022 34678999986 46899999
Q ss_pred eCCcc---ccCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCCCCChhhhhhhcCCeEEeeccchhhhhcCCCcCceeec
Q 022329 111 YGSIT---VMTEQHLTEFAWGLANSKRPFLWILRPDVVMGDSVVLPDEYFEEIKDRGFIVSWCNQEQVLSHPSVGAFLTH 187 (299)
Q Consensus 111 ~GS~~---~~~~~~~~~i~~al~~~~~~~lw~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~w~pq~~iL~~~~v~~~ItH 187 (299)
|||.. .++.+.++.+++++++.+++|||+++... .+ ...++|+++.+|+||.+||+|+++++||||
T Consensus 303 ~GS~~~~~~~~~~~~~~~l~a~~~l~~~viw~~~~~~-------~~----~~~p~Nv~i~~w~Pq~~lL~hp~v~~fItH 371 (507)
T PHA03392 303 FGSSIDTNDMDNEFLQMLLRTFKKLPYNVLWKYDGEV-------EA----INLPANVLTQKWFPQRAVLKHKNVKAFVTQ 371 (507)
T ss_pred CCCCCcCCCCCHHHHHHHHHHHHhCCCeEEEEECCCc-------Cc----ccCCCceEEecCCCHHHHhcCCCCCEEEec
Confidence 99984 36789999999999999999999998431 11 134789999999999999999999999999
Q ss_pred cCchhhhhhhhcCcCeeeccCCcChHhHHHHHHHHhCcEEEecC-CCCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHH
Q 022329 188 CGWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNH-DVKRGDIEALVKEMMDGDEGKKMRQKAWEWKKKAE 266 (299)
Q Consensus 188 gG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~-~~~~~~i~~av~~vl~~~~~~~~r~~a~~l~~~~~ 266 (299)
||+||++||+++|||+|++|+++||+.||+++ +++|+|+.++. +++.++|.++|+++|+|+ +|++||+++++.++
T Consensus 372 GG~~s~~Eal~~GvP~v~iP~~~DQ~~Na~rv-~~~G~G~~l~~~~~t~~~l~~ai~~vl~~~---~y~~~a~~ls~~~~ 447 (507)
T PHA03392 372 GGVQSTDEAIDALVPMVGLPMMGDQFYNTNKY-VELGIGRALDTVTVSAAQLVLAIVDVIENP---KYRKNLKELRHLIR 447 (507)
T ss_pred CCcccHHHHHHcCCCEEECCCCccHHHHHHHH-HHcCcEEEeccCCcCHHHHHHHHHHHhCCH---HHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999 89999999987 789999999999999987 89999999999987
Q ss_pred HHHhcCCchHHHHHHHHHHHHhcC
Q 022329 267 AATAVGGQSYNNFDRLVKMVLQQG 290 (299)
Q Consensus 267 ~~~~~gg~s~~~l~~li~~l~~~~ 290 (299)
+ ..-+..+.....+|.+.+.+
T Consensus 448 ~---~p~~~~~~av~~iE~v~r~~ 468 (507)
T PHA03392 448 H---QPMTPLHKAIWYTEHVIRNK 468 (507)
T ss_pred h---CCCCHHHHHHHHHHHHHhCC
Confidence 4 33345566688889887765
No 24
>KOG1192 consensus UDP-glucuronosyl and UDP-glucosyl transferase [Carbohydrate transport and metabolism; Energy production and conversion]
Probab=100.00 E-value=5.3e-35 Score=282.74 Aligned_cols=226 Identities=29% Similarity=0.517 Sum_probs=169.6
Q ss_pred cCccEEEEcCcccccHHHHHHHHhcCCcEEEeCCccCcchhhhhhhhhcCCCCCccccchhHHhhccCCCC--ceEEEEe
Q 022329 34 FKSSAIIFNTFDEFEHEALEVIASKFPNIYTVGPLPLLCKQVVEAKFRSFGSSLWKEDTDCLKWLDKRDAN--SVVYVNY 111 (299)
Q Consensus 34 ~~~~~~l~ns~~~le~~~~~~~r~~~p~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~--~vvyvs~ 111 (299)
.+++..++|+.+-++.+ +++..+++++|||++...... .+..+.+|++..+.. ++|||||
T Consensus 223 ~~~~~~~ln~~~~~~~~----~~~~~~~v~~IG~l~~~~~~~--------------~~~~~~~wl~~~~~~~~~vvyvSf 284 (496)
T KOG1192|consen 223 VNASFIFLNSNPLLDFE----PRPLLPKVIPIGPLHVKDSKQ--------------KSPLPLEWLDILDESRHSVVYISF 284 (496)
T ss_pred hcCeEEEEccCcccCCC----CCCCCCCceEECcEEecCccc--------------cccccHHHHHHHhhccCCeEEEEC
Confidence 34455666664444431 245568999999998763210 111467898877665 8999999
Q ss_pred CCcc---ccCHHHHHHHHHHHHcC-CCCEEEEEcCCCCCCCCCCCChhhhhhhcCCeEEeeccchhhh-hcCCCcCceee
Q 022329 112 GSIT---VMTEQHLTEFAWGLANS-KRPFLWILRPDVVMGDSVVLPDEYFEEIKDRGFIVSWCNQEQV-LSHPSVGAFLT 186 (299)
Q Consensus 112 GS~~---~~~~~~~~~i~~al~~~-~~~~lw~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~w~pq~~i-L~~~~v~~~It 186 (299)
||+. .++.++..+++.+++++ +++|+|+++.... ..+++++.++-++|+...+|+||.++ |+|+++++|||
T Consensus 285 GS~~~~~~lp~~~~~~l~~~l~~~~~~~FiW~~~~~~~----~~~~~~~~~~~~~nV~~~~W~PQ~~lll~H~~v~~FvT 360 (496)
T KOG1192|consen 285 GSMVNSADLPEEQKKELAKALESLQGVTFLWKYRPDDS----IYFPEGLPNRGRGNVVLSKWAPQNDLLLDHPAVGGFVT 360 (496)
T ss_pred CcccccccCCHHHHHHHHHHHHhCCCceEEEEecCCcc----hhhhhcCCCCCcCceEEecCCCcHHHhcCCCcCcEEEE
Confidence 9997 79999999999999999 8899999996421 11223332222467888999999998 59999999999
Q ss_pred ccCchhhhhhhhcCcCeeeccCCcChHhHHHHHHHHhCcEEEecCCCCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHH
Q 022329 187 HCGWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVKRGDIEALVKEMMDGDEGKKMRQKAWEWKKKAE 266 (299)
Q Consensus 187 HgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~i~~av~~vl~~~~~~~~r~~a~~l~~~~~ 266 (299)
||||||++|++++|||||++|+++||+.||++++++.++++....+.+...+..++.++++++ +|+++|+++++..+
T Consensus 361 HgG~nSt~E~~~~GvP~v~~Plf~DQ~~Na~~i~~~g~~~v~~~~~~~~~~~~~~~~~il~~~---~y~~~~~~l~~~~~ 437 (496)
T KOG1192|consen 361 HGGWNSTLESIYSGVPMVCVPLFGDQPLNARLLVRHGGGGVLDKRDLVSEELLEAIKEILENE---EYKEAAKRLSEILR 437 (496)
T ss_pred CCcccHHHHHHhcCCceecCCccccchhHHHHHHhCCCEEEEehhhcCcHHHHHHHHHHHcCh---HHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999444444544444666666999999999988 89999999999976
Q ss_pred HHHhcCCchHHHHHHHHHHHHh
Q 022329 267 AATAVGGQSYNNFDRLVKMVLQ 288 (299)
Q Consensus 267 ~~~~~gg~s~~~l~~li~~l~~ 288 (299)
....+. ......++....
T Consensus 438 ---~~p~~~-~~~~~~~e~~~~ 455 (496)
T KOG1192|consen 438 ---DQPISP-ELAVKWVEFVAR 455 (496)
T ss_pred ---cCCCCH-HHHHHHHHHHHh
Confidence 334444 444544454444
No 25
>TIGR01426 MGT glycosyltransferase, MGT family. This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production.
Probab=99.96 E-value=1.3e-27 Score=224.71 Aligned_cols=207 Identities=19% Similarity=0.279 Sum_probs=162.6
Q ss_pred EEEEcCcccccHHHHHHHHh-cCCcEEEeCCccCcchhhhhhhhhcCCCCCccccchhHHhhccCCCCceEEEEeCCccc
Q 022329 38 AIIFNTFDEFEHEALEVIAS-KFPNIYTVGPLPLLCKQVVEAKFRSFGSSLWKEDTDCLKWLDKRDANSVVYVNYGSITV 116 (299)
Q Consensus 38 ~~l~ns~~~le~~~~~~~r~-~~p~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~vvyvs~GS~~~ 116 (299)
..+..+.+.|+++ .+ +++++++|||+...... ...|.....++++|||||||...
T Consensus 182 ~~l~~~~~~l~~~-----~~~~~~~~~~~Gp~~~~~~~-------------------~~~~~~~~~~~~~v~vs~Gs~~~ 237 (392)
T TIGR01426 182 LNLVYTPKAFQPA-----GETFDDSFTFVGPCIGDRKE-------------------DGSWERPGDGRPVVLISLGTVFN 237 (392)
T ss_pred cEEEeCChHhCCC-----ccccCCCeEEECCCCCCccc-------------------cCCCCCCCCCCCEEEEecCccCC
Confidence 3555554444433 33 45689999997643211 12366655678999999999865
Q ss_pred cCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCCCCChhhhhhhcCCeEEeeccchhhhhcCCCcCceeeccCchhhhhh
Q 022329 117 MTEQHLTEFAWGLANSKRPFLWILRPDVVMGDSVVLPDEYFEEIKDRGFIVSWCNQEQVLSHPSVGAFLTHCGWNSTMES 196 (299)
Q Consensus 117 ~~~~~~~~i~~al~~~~~~~lw~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~w~pq~~iL~~~~v~~~ItHgG~~s~~Ea 196 (299)
.....++.+++++.+.+++++|..+.... ... ....++|+.+.+|+||..+|.++++ ||||||+||++|+
T Consensus 238 ~~~~~~~~~~~al~~~~~~~i~~~g~~~~-------~~~-~~~~~~~v~~~~~~p~~~ll~~~~~--~I~hgG~~t~~Ea 307 (392)
T TIGR01426 238 NQPSFYRTCVEAFRDLDWHVVLSVGRGVD-------PAD-LGELPPNVEVRQWVPQLEILKKADA--FITHGGMNSTMEA 307 (392)
T ss_pred CCHHHHHHHHHHHhcCCCeEEEEECCCCC-------hhH-hccCCCCeEEeCCCCHHHHHhhCCE--EEECCCchHHHHH
Confidence 56668889999999999999998864310 011 1234689999999999999999887 9999999999999
Q ss_pred hhcCcCeeeccCCcChHhHHHHHHHHhCcEEEecC-CCCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHhcCCch
Q 022329 197 ICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNH-DVKRGDIEALVKEMMDGDEGKKMRQKAWEWKKKAEAATAVGGQS 275 (299)
Q Consensus 197 l~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~-~~~~~~i~~av~~vl~~~~~~~~r~~a~~l~~~~~~~~~~gg~s 275 (299)
+++|+|+|++|...||+.||+++ +++|+|..+.. +++.+++.++|+++|+|+ +|+++++++++.++. .+|.
T Consensus 308 l~~G~P~v~~p~~~dq~~~a~~l-~~~g~g~~l~~~~~~~~~l~~ai~~~l~~~---~~~~~~~~l~~~~~~---~~~~- 379 (392)
T TIGR01426 308 LFNGVPMVAVPQGADQPMTARRI-AELGLGRHLPPEEVTAEKLREAVLAVLSDP---RYAERLRKMRAEIRE---AGGA- 379 (392)
T ss_pred HHhCCCEEecCCcccHHHHHHHH-HHCCCEEEeccccCCHHHHHHHHHHHhcCH---HHHHHHHHHHHHHHH---cCCH-
Confidence 99999999999999999999999 89999999976 789999999999999987 899999999999763 3444
Q ss_pred HHHHHHHHHHHH
Q 022329 276 YNNFDRLVKMVL 287 (299)
Q Consensus 276 ~~~l~~li~~l~ 287 (299)
...+++|+.+.
T Consensus 380 -~~aa~~i~~~~ 390 (392)
T TIGR01426 380 -RRAADEIEGFL 390 (392)
T ss_pred -HHHHHHHHHhh
Confidence 34467776653
No 26
>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]
Probab=99.95 E-value=2e-27 Score=223.89 Aligned_cols=166 Identities=20% Similarity=0.294 Sum_probs=146.6
Q ss_pred CCceEEEEeCCccccCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCCCCChhhhhhhcCCeEEeeccchhhhhcCCCcC
Q 022329 103 ANSVVYVNYGSITVMTEQHLTEFAWGLANSKRPFLWILRPDVVMGDSVVLPDEYFEEIKDRGFIVSWCNQEQVLSHPSVG 182 (299)
Q Consensus 103 ~~~vvyvs~GS~~~~~~~~~~~i~~al~~~~~~~lw~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~w~pq~~iL~~~~v~ 182 (299)
++++||+||||.... .+.++.+.+++..++.+||...... . . -....+.|+++.+|+||..+|.++++
T Consensus 236 d~~~vyvslGt~~~~-~~l~~~~~~a~~~l~~~vi~~~~~~-~--------~-~~~~~p~n~~v~~~~p~~~~l~~ad~- 303 (406)
T COG1819 236 DRPIVYVSLGTVGNA-VELLAIVLEALADLDVRVIVSLGGA-R--------D-TLVNVPDNVIVADYVPQLELLPRADA- 303 (406)
T ss_pred CCCeEEEEcCCcccH-HHHHHHHHHHHhcCCcEEEEecccc-c--------c-ccccCCCceEEecCCCHHHHhhhcCE-
Confidence 688999999999766 8899999999999999999988641 0 1 12245789999999999999999999
Q ss_pred ceeeccCchhhhhhhhcCcCeeeccCCcChHhHHHHHHHHhCcEEEecC-CCCHHHHHHHHHHHhcCChhHHHHHHHHHH
Q 022329 183 AFLTHCGWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNH-DVKRGDIEALVKEMMDGDEGKKMRQKAWEW 261 (299)
Q Consensus 183 ~~ItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~-~~~~~~i~~av~~vl~~~~~~~~r~~a~~l 261 (299)
||||||+||++||+++|||+|++|...||+.||.++ ++.|+|+.+.. ..+.+.++++|+++|+|+ .|+++++++
T Consensus 304 -vI~hGG~gtt~eaL~~gvP~vv~P~~~DQ~~nA~rv-e~~G~G~~l~~~~l~~~~l~~av~~vL~~~---~~~~~~~~~ 378 (406)
T COG1819 304 -VIHHGGAGTTSEALYAGVPLVVIPDGADQPLNAERV-EELGAGIALPFEELTEERLRAAVNEVLADD---SYRRAAERL 378 (406)
T ss_pred -EEecCCcchHHHHHHcCCCEEEecCCcchhHHHHHH-HHcCCceecCcccCCHHHHHHHHHHHhcCH---HHHHHHHHH
Confidence 999999999999999999999999999999999999 99999999998 799999999999999988 899999999
Q ss_pred HHHHHHHHhcCCchHHHHHHHHHHHHhcC
Q 022329 262 KKKAEAATAVGGQSYNNFDRLVKMVLQQG 290 (299)
Q Consensus 262 ~~~~~~~~~~gg~s~~~l~~li~~l~~~~ 290 (299)
++.+++ .+| .+..+++++.+....
T Consensus 379 ~~~~~~---~~g--~~~~a~~le~~~~~~ 402 (406)
T COG1819 379 AEEFKE---EDG--PAKAADLLEEFAREK 402 (406)
T ss_pred HHHhhh---ccc--HHHHHHHHHHHHhcc
Confidence 999874 344 455688888876643
No 27
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.
Probab=99.92 E-value=8.6e-25 Score=205.97 Aligned_cols=171 Identities=18% Similarity=0.273 Sum_probs=136.8
Q ss_pred cchhHHhhccCCCCceEEEEeCCccc-cCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCCCCChhhhhhhcCCeEEeec
Q 022329 91 DTDCLKWLDKRDANSVVYVNYGSITV-MTEQHLTEFAWGLANSKRPFLWILRPDVVMGDSVVLPDEYFEEIKDRGFIVSW 169 (299)
Q Consensus 91 ~~~~~~wl~~~~~~~vvyvs~GS~~~-~~~~~~~~i~~al~~~~~~~lw~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~w 169 (299)
+.++..|++. .+++|||+|||... ........+++++...+.+++|+.+.... .. ...++|+++.+|
T Consensus 228 ~~~~~~~~~~--~~~~v~v~~Gs~~~~~~~~~~~~~~~a~~~~~~~~i~~~g~~~~-------~~---~~~~~~v~~~~~ 295 (401)
T cd03784 228 PPELWLFLAA--GRPPVYVGFGSMVVRDPEALARLDVEAVATLGQRAILSLGWGGL-------GA---EDLPDNVRVVDF 295 (401)
T ss_pred CHHHHHHHhC--CCCcEEEeCCCCcccCHHHHHHHHHHHHHHcCCeEEEEccCccc-------cc---cCCCCceEEeCC
Confidence 4456778765 56899999999965 34567788999999899999999875421 00 234689999999
Q ss_pred cchhhhhcCCCcCceeeccCchhhhhhhhcCcCeeeccCCcChHhHHHHHHHHhCcEEEecC-CCCHHHHHHHHHHHhcC
Q 022329 170 CNQEQVLSHPSVGAFLTHCGWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNH-DVKRGDIEALVKEMMDG 248 (299)
Q Consensus 170 ~pq~~iL~~~~v~~~ItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~-~~~~~~i~~av~~vl~~ 248 (299)
+||..+|.++++ ||||||+||++|++++|||+|++|+..||+.||+++ ++.|+|+.+.. .++.++|.+++++++++
T Consensus 296 ~p~~~ll~~~d~--~I~hgG~~t~~eal~~GvP~v~~P~~~dQ~~~a~~~-~~~G~g~~l~~~~~~~~~l~~al~~~l~~ 372 (401)
T cd03784 296 VPHDWLLPRCAA--VVHHGGAGTTAAALRAGVPQLVVPFFGDQPFWAARV-AELGAGPALDPRELTAERLAAALRRLLDP 372 (401)
T ss_pred CCHHHHhhhhhe--eeecCCchhHHHHHHcCCCEEeeCCCCCcHHHHHHH-HHCCCCCCCCcccCCHHHHHHHHHHHhCH
Confidence 999999999888 999999999999999999999999999999999999 89999999976 67999999999999985
Q ss_pred ChhHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHH
Q 022329 249 DEGKKMRQKAWEWKKKAEAATAVGGQSYNNFDRLVKM 285 (299)
Q Consensus 249 ~~~~~~r~~a~~l~~~~~~~~~~gg~s~~~l~~li~~ 285 (299)
.++++++++++.++ ..+|. ....++|+.
T Consensus 373 ----~~~~~~~~~~~~~~---~~~g~--~~~~~~ie~ 400 (401)
T cd03784 373 ----PSRRRAAALLRRIR---EEDGV--PSAADVIER 400 (401)
T ss_pred ----HHHHHHHHHHHHHH---hccCH--HHHHHHHhh
Confidence 35556666666543 22333 334666653
No 28
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=99.62 E-value=1.1e-14 Score=135.18 Aligned_cols=145 Identities=17% Similarity=0.187 Sum_probs=107.2
Q ss_pred CCCCceEEEEeCCccccCH-HHHHHHHHHHHcCCCCEEEEEcCCCCCCCCCCCChhhhhhhcCCeEEeecc-chh-hhhc
Q 022329 101 RDANSVVYVNYGSITVMTE-QHLTEFAWGLANSKRPFLWILRPDVVMGDSVVLPDEYFEEIKDRGFIVSWC-NQE-QVLS 177 (299)
Q Consensus 101 ~~~~~vvyvs~GS~~~~~~-~~~~~i~~al~~~~~~~lw~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~w~-pq~-~iL~ 177 (299)
.+++++|+|..||.+.... +.+..++..+.. +.+++|..+.+. + +..... ..+..+.+|+ ++. .++.
T Consensus 182 ~~~~~~iLv~GGS~Ga~~in~~~~~~l~~l~~-~~~vv~~~G~~~-------~-~~~~~~-~~~~~~~~f~~~~m~~~~~ 251 (352)
T PRK12446 182 SRKKPVITIMGGSLGAKKINETVREALPELLL-KYQIVHLCGKGN-------L-DDSLQN-KEGYRQFEYVHGELPDILA 251 (352)
T ss_pred CCCCcEEEEECCccchHHHHHHHHHHHHhhcc-CcEEEEEeCCch-------H-HHHHhh-cCCcEEecchhhhHHHHHH
Confidence 3467899999999964333 334444544432 478899888541 1 111111 1344566787 434 5899
Q ss_pred CCCcCceeeccCchhhhhhhhcCcCeeeccCC-----cChHhHHHHHHHHhCcEEEecC-CCCHHHHHHHHHHHhcCChh
Q 022329 178 HPSVGAFLTHCGWNSTMESICGGVPVICWPFF-----AEQQTNCRYACTTWGIGMEVNH-DVKRGDIEALVKEMMDGDEG 251 (299)
Q Consensus 178 ~~~v~~~ItHgG~~s~~Eal~~GvP~i~~P~~-----~DQ~~na~~v~~~~g~G~~l~~-~~~~~~i~~av~~vl~~~~~ 251 (299)
++++ +|||||.+|+.|++++|+|+|++|+. .||..||+.+ ++.|+|..+.. +++.+.+.+++.++++|++
T Consensus 252 ~adl--vIsr~G~~t~~E~~~~g~P~I~iP~~~~~~~~~Q~~Na~~l-~~~g~~~~l~~~~~~~~~l~~~l~~ll~~~~- 327 (352)
T PRK12446 252 ITDF--VISRAGSNAIFEFLTLQKPMLLIPLSKFASRGDQILNAESF-ERQGYASVLYEEDVTVNSLIKHVEELSHNNE- 327 (352)
T ss_pred hCCE--EEECCChhHHHHHHHcCCCEEEEcCCCCCCCchHHHHHHHH-HHCCCEEEcchhcCCHHHHHHHHHHHHcCHH-
Confidence 9998 99999999999999999999999984 4899999999 88999999876 7899999999999998752
Q ss_pred HHHHHHHHH
Q 022329 252 KKMRQKAWE 260 (299)
Q Consensus 252 ~~~r~~a~~ 260 (299)
.+++++++
T Consensus 328 -~~~~~~~~ 335 (352)
T PRK12446 328 -KYKTALKK 335 (352)
T ss_pred -HHHHHHHH
Confidence 45555444
No 29
>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=99.49 E-value=6.1e-13 Score=123.20 Aligned_cols=147 Identities=16% Similarity=0.228 Sum_probs=109.9
Q ss_pred CCceEEEEeCCccccC-HHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCCCCChhhhhhhc-CC-eEEeeccchhh-hhcC
Q 022329 103 ANSVVYVNYGSITVMT-EQHLTEFAWGLANSKRPFLWILRPDVVMGDSVVLPDEYFEEIK-DR-GFIVSWCNQEQ-VLSH 178 (299)
Q Consensus 103 ~~~vvyvs~GS~~~~~-~~~~~~i~~al~~~~~~~lw~~~~~~~~~~~~~l~~~~~~~~~-~~-~~v~~w~pq~~-iL~~ 178 (299)
++++|+|.-||.+... .+.+..+...+.+ .+++++..+.+. .+....... .+ +.+.+|..++. +++.
T Consensus 182 ~~~~ilV~GGS~Ga~~ln~~v~~~~~~l~~-~~~v~~~~G~~~--------~~~~~~~~~~~~~~~v~~f~~dm~~~~~~ 252 (357)
T COG0707 182 DKKTILVTGGSQGAKALNDLVPEALAKLAN-RIQVIHQTGKND--------LEELKSAYNELGVVRVLPFIDDMAALLAA 252 (357)
T ss_pred CCcEEEEECCcchhHHHHHHHHHHHHHhhh-CeEEEEEcCcch--------HHHHHHHHhhcCcEEEeeHHhhHHHHHHh
Confidence 5789999999995432 3444444444444 578888777541 122222222 22 67889998775 8888
Q ss_pred CCcCceeeccCchhhhhhhhcCcCeeeccCC----cChHhHHHHHHHHhCcEEEecC-CCCHHHHHHHHHHHhcCCh-hH
Q 022329 179 PSVGAFLTHCGWNSTMESICGGVPVICWPFF----AEQQTNCRYACTTWGIGMEVNH-DVKRGDIEALVKEMMDGDE-GK 252 (299)
Q Consensus 179 ~~v~~~ItHgG~~s~~Eal~~GvP~i~~P~~----~DQ~~na~~v~~~~g~G~~l~~-~~~~~~i~~av~~vl~~~~-~~ 252 (299)
+++ +||+.|.+|+.|.+++|+|+|.+|.- .||..||+.+ ++.|.|..+.. ++|.+.+.+.|.+++.+++ .+
T Consensus 253 ADL--vIsRaGa~Ti~E~~a~g~P~IliP~p~~~~~~Q~~NA~~l-~~~gaa~~i~~~~lt~~~l~~~i~~l~~~~~~l~ 329 (357)
T COG0707 253 ADL--VISRAGALTIAELLALGVPAILVPYPPGADGHQEYNAKFL-EKAGAALVIRQSELTPEKLAELILRLLSNPEKLK 329 (357)
T ss_pred ccE--EEeCCcccHHHHHHHhCCCEEEeCCCCCccchHHHHHHHH-HhCCCEEEeccccCCHHHHHHHHHHHhcCHHHHH
Confidence 888 99999999999999999999999972 4899999999 99999999998 7899999999999998742 33
Q ss_pred HHHHHHHHH
Q 022329 253 KMRQKAWEW 261 (299)
Q Consensus 253 ~~r~~a~~l 261 (299)
.|+++++++
T Consensus 330 ~m~~~a~~~ 338 (357)
T COG0707 330 AMAENAKKL 338 (357)
T ss_pred HHHHHHHhc
Confidence 455554444
No 30
>PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B.
Probab=99.49 E-value=8.4e-16 Score=127.78 Aligned_cols=136 Identities=13% Similarity=0.225 Sum_probs=94.3
Q ss_pred eEEEEeCCccccC-HHHHHHHHHHHHc--CCCCEEEEEcCCCCCCCCCCCChhhhhhhcCCeEEeeccc-hhhhhcCCCc
Q 022329 106 VVYVNYGSITVMT-EQHLTEFAWGLAN--SKRPFLWILRPDVVMGDSVVLPDEYFEEIKDRGFIVSWCN-QEQVLSHPSV 181 (299)
Q Consensus 106 vvyvs~GS~~~~~-~~~~~~i~~al~~--~~~~~lw~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~w~p-q~~iL~~~~v 181 (299)
+|+|+.||..... .+.+..+...+.. ..++|++..+...... ....+ ...+.++.+.+|.+ ...++..+++
T Consensus 1 tilv~gGs~g~~~l~~~v~~~~~~~~~~~~~~~viv~~G~~~~~~----~~~~~-~~~~~~v~~~~~~~~m~~~m~~aDl 75 (167)
T PF04101_consen 1 TILVTGGSQGARDLNRLVLKILELLAEKHKNIQVIVQTGKNNYEE----LKIKV-ENFNPNVKVFGFVDNMAELMAAADL 75 (167)
T ss_dssp -EEEEETTTSHHHHHCCCCCHHHHHHHHHHHCCCCCCCTTCECHH----HCCCH-CCTTCCCEEECSSSSHHHHHHHHSE
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHhhcCCCcEEEEEECCCcHHH----HHHHH-hccCCcEEEEechhhHHHHHHHcCE
Confidence 4899999885321 1122223333332 2578888887542110 00011 11125789999999 5569989998
Q ss_pred CceeeccCchhhhhhhhcCcCeeeccCCc----ChHhHHHHHHHHhCcEEEecC-CCCHHHHHHHHHHHhcCC
Q 022329 182 GAFLTHCGWNSTMESICGGVPVICWPFFA----EQQTNCRYACTTWGIGMEVNH-DVKRGDIEALVKEMMDGD 249 (299)
Q Consensus 182 ~~~ItHgG~~s~~Eal~~GvP~i~~P~~~----DQ~~na~~v~~~~g~G~~l~~-~~~~~~i~~av~~vl~~~ 249 (299)
+|||||.+|++|++++|+|+|++|... +|..||..+ ++.|+|..+.. ..+.+.|.++|.+++.++
T Consensus 76 --vIs~aG~~Ti~E~l~~g~P~I~ip~~~~~~~~q~~na~~~-~~~g~~~~~~~~~~~~~~L~~~i~~l~~~~ 145 (167)
T PF04101_consen 76 --VISHAGAGTIAEALALGKPAIVIPLPGAADNHQEENAKEL-AKKGAAIMLDESELNPEELAEAIEELLSDP 145 (167)
T ss_dssp --EEECS-CHHHHHHHHCT--EEEE--TTT-T-CHHHHHHHH-HHCCCCCCSECCC-SCCCHHHHHHCHCCCH
T ss_pred --EEeCCCccHHHHHHHcCCCeeccCCCCcchHHHHHHHHHH-HHcCCccccCcccCCHHHHHHHHHHHHcCc
Confidence 999999999999999999999999988 999999999 88999999887 567899999999999876
No 31
>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1
Probab=99.43 E-value=8e-13 Score=120.66 Aligned_cols=121 Identities=14% Similarity=0.298 Sum_probs=96.4
Q ss_pred CCceEEEEeCCccccCHHHHHHHHHHHHcCC-CCEEEEEcCCCCCCCCCCCChhhhhhhcCCeEEeecc--chhhhhcCC
Q 022329 103 ANSVVYVNYGSITVMTEQHLTEFAWGLANSK-RPFLWILRPDVVMGDSVVLPDEYFEEIKDRGFIVSWC--NQEQVLSHP 179 (299)
Q Consensus 103 ~~~vvyvs~GS~~~~~~~~~~~i~~al~~~~-~~~lw~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~w~--pq~~iL~~~ 179 (299)
+++.|+|+||..... .++++++..+ ++|++. +... .+...+|+.+.+|. .-.+++..+
T Consensus 191 ~~~~iLv~~gg~~~~------~~~~~l~~~~~~~~~v~-g~~~------------~~~~~~ni~~~~~~~~~~~~~m~~a 251 (318)
T PF13528_consen 191 DEPKILVYFGGGGPG------DLIEALKALPDYQFIVF-GPNA------------ADPRPGNIHVRPFSTPDFAELMAAA 251 (318)
T ss_pred CCCEEEEEeCCCcHH------HHHHHHHhCCCCeEEEE-cCCc------------ccccCCCEEEeecChHHHHHHHHhC
Confidence 456899999988533 5566676665 666655 4321 11125789988876 344588888
Q ss_pred CcCceeeccCchhhhhhhhcCcCeeeccC--CcChHhHHHHHHHHhCcEEEecC-CCCHHHHHHHHHHH
Q 022329 180 SVGAFLTHCGWNSTMESICGGVPVICWPF--FAEQQTNCRYACTTWGIGMEVNH-DVKRGDIEALVKEM 245 (299)
Q Consensus 180 ~v~~~ItHgG~~s~~Eal~~GvP~i~~P~--~~DQ~~na~~v~~~~g~G~~l~~-~~~~~~i~~av~~v 245 (299)
++ +|||||+||++|++++|+|+|++|. +.+|..||+.+ +++|+|+.+.. +++++.|.++++++
T Consensus 252 d~--vIs~~G~~t~~Ea~~~g~P~l~ip~~~~~EQ~~~a~~l-~~~G~~~~~~~~~~~~~~l~~~l~~~ 317 (318)
T PF13528_consen 252 DL--VISKGGYTTISEALALGKPALVIPRPGQDEQEYNARKL-EELGLGIVLSQEDLTPERLAEFLERL 317 (318)
T ss_pred CE--EEECCCHHHHHHHHHcCCCEEEEeCCCCchHHHHHHHH-HHCCCeEEcccccCCHHHHHHHHhcC
Confidence 87 9999999999999999999999999 78999999999 99999999976 78999999998763
No 32
>TIGR00661 MJ1255 conserved hypothetical protein. This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.
Probab=99.42 E-value=1.4e-12 Score=119.75 Aligned_cols=122 Identities=16% Similarity=0.195 Sum_probs=87.6
Q ss_pred CceEEEEeCCccccCHHHHHHHHHHHHcCCC-CEEEEEcCCCCCCCCCCCChhhhhhhcCCeEEeeccc--hhhhhcCCC
Q 022329 104 NSVVYVNYGSITVMTEQHLTEFAWGLANSKR-PFLWILRPDVVMGDSVVLPDEYFEEIKDRGFIVSWCN--QEQVLSHPS 180 (299)
Q Consensus 104 ~~vvyvs~GS~~~~~~~~~~~i~~al~~~~~-~~lw~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~w~p--q~~iL~~~~ 180 (299)
++.|++.+|+.. .+.+++++.+.+. .|+ +.... ... +..++|+.+.+|.| ....|..++
T Consensus 188 ~~~iLv~~g~~~------~~~l~~~l~~~~~~~~i--~~~~~------~~~----~~~~~~v~~~~~~~~~~~~~l~~ad 249 (321)
T TIGR00661 188 EDYILVYIGFEY------RYKILELLGKIANVKFV--CYSYE------VAK----NSYNENVEIRRITTDNFKELIKNAE 249 (321)
T ss_pred CCcEEEECCcCC------HHHHHHHHHhCCCeEEE--EeCCC------CCc----cccCCCEEEEECChHHHHHHHHhCC
Confidence 466888888863 2345677766653 443 22210 011 12357899999997 334666666
Q ss_pred cCceeeccCchhhhhhhhcCcCeeeccCCc--ChHhHHHHHHHHhCcEEEecC-CCCHHHHHHHHHHHhcCC
Q 022329 181 VGAFLTHCGWNSTMESICGGVPVICWPFFA--EQQTNCRYACTTWGIGMEVNH-DVKRGDIEALVKEMMDGD 249 (299)
Q Consensus 181 v~~~ItHgG~~s~~Eal~~GvP~i~~P~~~--DQ~~na~~v~~~~g~G~~l~~-~~~~~~i~~av~~vl~~~ 249 (299)
+ +|||||++|++|++++|+|+|++|..+ ||..||+.+ ++.|+|+.+.. ++ ++.+++.++++++
T Consensus 250 ~--vI~~~G~~t~~Ea~~~g~P~l~ip~~~~~eQ~~na~~l-~~~g~~~~l~~~~~---~~~~~~~~~~~~~ 315 (321)
T TIGR00661 250 L--VITHGGFSLISEALSLGKPLIVIPDLGQFEQGNNAVKL-EDLGCGIALEYKEL---RLLEAILDIRNMK 315 (321)
T ss_pred E--EEECCChHHHHHHHHcCCCEEEEcCCCcccHHHHHHHH-HHCCCEEEcChhhH---HHHHHHHhccccc
Confidence 6 999999999999999999999999954 899999999 89999999975 23 5555666666665
No 33
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=99.16 E-value=5.8e-10 Score=103.46 Aligned_cols=84 Identities=15% Similarity=0.285 Sum_probs=74.4
Q ss_pred CeEEeeccc-hhhhhcCCCcCceeeccCchhhhhhhhcCcCeeeccC----CcChHhHHHHHHHHhCcEEEecC-CCCHH
Q 022329 163 RGFIVSWCN-QEQVLSHPSVGAFLTHCGWNSTMESICGGVPVICWPF----FAEQQTNCRYACTTWGIGMEVNH-DVKRG 236 (299)
Q Consensus 163 ~~~v~~w~p-q~~iL~~~~v~~~ItHgG~~s~~Eal~~GvP~i~~P~----~~DQ~~na~~v~~~~g~G~~l~~-~~~~~ 236 (299)
++.+.+|.. ...++..+++ +|+|+|.++++|++++|+|+|++|. .++|..|+..+ .+.|.|..+.. +++.+
T Consensus 236 ~v~~~g~~~~~~~~~~~~d~--~i~~~g~~~~~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~~i-~~~~~g~~~~~~~~~~~ 312 (357)
T PRK00726 236 NAEVVPFIDDMAAAYAAADL--VICRAGASTVAELAAAGLPAILVPLPHAADDHQTANARAL-VDAGAALLIPQSDLTPE 312 (357)
T ss_pred cEEEeehHhhHHHHHHhCCE--EEECCCHHHHHHHHHhCCCEEEecCCCCCcCcHHHHHHHH-HHCCCEEEEEcccCCHH
Confidence 377889984 4469988888 9999999999999999999999997 46899999999 88999999975 66899
Q ss_pred HHHHHHHHHhcCC
Q 022329 237 DIEALVKEMMDGD 249 (299)
Q Consensus 237 ~i~~av~~vl~~~ 249 (299)
.+.+++.++++|+
T Consensus 313 ~l~~~i~~ll~~~ 325 (357)
T PRK00726 313 KLAEKLLELLSDP 325 (357)
T ss_pred HHHHHHHHHHcCH
Confidence 9999999999986
No 34
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.13 E-value=4.9e-09 Score=96.66 Aligned_cols=136 Identities=13% Similarity=0.146 Sum_probs=96.0
Q ss_pred CCceEEEEeCCccccC-HHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCCCCChhhhhhh---cCCeEEeecc-chhhhhc
Q 022329 103 ANSVVYVNYGSITVMT-EQHLTEFAWGLANSKRPFLWILRPDVVMGDSVVLPDEYFEEI---KDRGFIVSWC-NQEQVLS 177 (299)
Q Consensus 103 ~~~vvyvs~GS~~~~~-~~~~~~i~~al~~~~~~~lw~~~~~~~~~~~~~l~~~~~~~~---~~~~~v~~w~-pq~~iL~ 177 (299)
++++|++..|+..... .+.+..++..+.+.+..+++.++... .+.+.+.. ..|+.+.+|. +...+|+
T Consensus 180 ~~~~i~~~~g~~~~~~~~~~l~~a~~~l~~~~~~~~~i~G~g~--------~~~l~~~~~~~~~~v~~~g~~~~~~~~l~ 251 (350)
T cd03785 180 GKPTLLVFGGSQGARAINEAVPEALAELLRKRLQVIHQTGKGD--------LEEVKKAYEELGVNYEVFPFIDDMAAAYA 251 (350)
T ss_pred CCeEEEEECCcHhHHHHHHHHHHHHHHhhccCeEEEEEcCCcc--------HHHHHHHHhccCCCeEEeehhhhHHHHHH
Confidence 4556666666663221 12233344444433455566665431 12222222 3688999998 4455898
Q ss_pred CCCcCceeeccCchhhhhhhhcCcCeeeccC----CcChHhHHHHHHHHhCcEEEecC-CCCHHHHHHHHHHHhcCC
Q 022329 178 HPSVGAFLTHCGWNSTMESICGGVPVICWPF----FAEQQTNCRYACTTWGIGMEVNH-DVKRGDIEALVKEMMDGD 249 (299)
Q Consensus 178 ~~~v~~~ItHgG~~s~~Eal~~GvP~i~~P~----~~DQ~~na~~v~~~~g~G~~l~~-~~~~~~i~~av~~vl~~~ 249 (299)
.+++ +|+++|.++++||+++|+|+|+.|. ..+|..|+..+ .+.|.|..+.. +.+.+++.+++.++++++
T Consensus 252 ~ad~--~v~~sg~~t~~Eam~~G~Pvv~~~~~~~~~~~~~~~~~~l-~~~g~g~~v~~~~~~~~~l~~~i~~ll~~~ 325 (350)
T cd03785 252 AADL--VISRAGASTVAELAALGLPAILIPLPYAADDHQTANARAL-VKAGAAVLIPQEELTPERLAAALLELLSDP 325 (350)
T ss_pred hcCE--EEECCCHhHHHHHHHhCCCEEEeecCCCCCCcHHHhHHHH-HhCCCEEEEecCCCCHHHHHHHHHHHhcCH
Confidence 8888 9999999999999999999999986 46789999998 77899999975 368999999999999875
No 35
>PRK13609 diacylglycerol glucosyltransferase; Provisional
Probab=99.10 E-value=1.7e-08 Score=94.54 Aligned_cols=133 Identities=17% Similarity=0.249 Sum_probs=96.8
Q ss_pred CCceEEEEeCCccccCHHHHHHHHHHHHcC-CCCEEEEEcCCCCCCCCCCCChhhh---hhhcCCeEEeeccchh-hhhc
Q 022329 103 ANSVVYVNYGSITVMTEQHLTEFAWGLANS-KRPFLWILRPDVVMGDSVVLPDEYF---EEIKDRGFIVSWCNQE-QVLS 177 (299)
Q Consensus 103 ~~~vvyvs~GS~~~~~~~~~~~i~~al~~~-~~~~lw~~~~~~~~~~~~~l~~~~~---~~~~~~~~v~~w~pq~-~iL~ 177 (299)
++++|++.-|+.... +.+..+++++.+. +.+++++.+.+. .+-+.+. +..++|+.+.+|+++. .+++
T Consensus 201 ~~~~il~~~G~~~~~--k~~~~li~~l~~~~~~~~viv~G~~~------~~~~~l~~~~~~~~~~v~~~g~~~~~~~l~~ 272 (380)
T PRK13609 201 NKKILLIMAGAHGVL--GNVKELCQSLMSVPDLQVVVVCGKNE------ALKQSLEDLQETNPDALKVFGYVENIDELFR 272 (380)
T ss_pred CCcEEEEEcCCCCCC--cCHHHHHHHHhhCCCcEEEEEeCCCH------HHHHHHHHHHhcCCCcEEEEechhhHHHHHH
Confidence 456777777877532 2345667777543 567776665321 0101111 1223578899999875 5898
Q ss_pred CCCcCceeeccCchhhhhhhhcCcCeeec-cCCcChHhHHHHHHHHhCcEEEecCCCCHHHHHHHHHHHhcCC
Q 022329 178 HPSVGAFLTHCGWNSTMESICGGVPVICW-PFFAEQQTNCRYACTTWGIGMEVNHDVKRGDIEALVKEMMDGD 249 (299)
Q Consensus 178 ~~~v~~~ItHgG~~s~~Eal~~GvP~i~~-P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~i~~av~~vl~~~ 249 (299)
.+++ +|+..|..++.||+++|+|+|+. |..+.|..|+..+ ++.|+|+... +.+++.+++.++++|+
T Consensus 273 ~aD~--~v~~~gg~t~~EA~a~g~PvI~~~~~~g~~~~n~~~~-~~~G~~~~~~---~~~~l~~~i~~ll~~~ 339 (380)
T PRK13609 273 VTSC--MITKPGGITLSEAAALGVPVILYKPVPGQEKENAMYF-ERKGAAVVIR---DDEEVFAKTEALLQDD 339 (380)
T ss_pred hccE--EEeCCCchHHHHHHHhCCCEEECCCCCCcchHHHHHH-HhCCcEEEEC---CHHHHHHHHHHHHCCH
Confidence 8888 99999989999999999999995 6667778899888 7889988764 7899999999999876
No 36
>PLN02605 monogalactosyldiacylglycerol synthase
Probab=99.09 E-value=3.3e-08 Score=92.86 Aligned_cols=135 Identities=15% Similarity=0.152 Sum_probs=92.1
Q ss_pred CCCceEEEEeCCccccCH-HHHHHHHHHHH-----cCCCCEEEEEcCCCCCCCCCCCChhhhhh-hcCCeEEeeccchhh
Q 022329 102 DANSVVYVNYGSITVMTE-QHLTEFAWGLA-----NSKRPFLWILRPDVVMGDSVVLPDEYFEE-IKDRGFIVSWCNQEQ 174 (299)
Q Consensus 102 ~~~~vvyvs~GS~~~~~~-~~~~~i~~al~-----~~~~~~lw~~~~~~~~~~~~~l~~~~~~~-~~~~~~v~~w~pq~~ 174 (299)
+++++|.+..|+...... ..++.+...+. ..+.++++..+.+. .+-+.+.+. ...++.+.+|+++..
T Consensus 204 ~~~~~il~~Gg~~g~~~~~~li~~l~~~~~~~~~~~~~~~~~vi~G~~~------~~~~~L~~~~~~~~v~~~G~~~~~~ 277 (382)
T PLN02605 204 EDLPAVLLMGGGEGMGPLEETARALGDSLYDKNLGKPIGQVVVICGRNK------KLQSKLESRDWKIPVKVRGFVTNME 277 (382)
T ss_pred CCCcEEEEECCCcccccHHHHHHHHHHhhccccccCCCceEEEEECCCH------HHHHHHHhhcccCCeEEEeccccHH
Confidence 356677776666543222 22333322221 23456667766431 000111111 124678889998765
Q ss_pred -hhcCCCcCceeeccCchhhhhhhhcCcCeeeccCCcChH-hHHHHHHHHhCcEEEecCCCCHHHHHHHHHHHhcC
Q 022329 175 -VLSHPSVGAFLTHCGWNSTMESICGGVPVICWPFFAEQQ-TNCRYACTTWGIGMEVNHDVKRGDIEALVKEMMDG 248 (299)
Q Consensus 175 -iL~~~~v~~~ItHgG~~s~~Eal~~GvP~i~~P~~~DQ~-~na~~v~~~~g~G~~l~~~~~~~~i~~av~~vl~~ 248 (299)
+++.+++ +|+.+|.+|+.||+++|+|+|+.+....|. .|+..+ .+.|.|+.+. +.+++.++|.+++++
T Consensus 278 ~l~~aaDv--~V~~~g~~ti~EAma~g~PvI~~~~~pgqe~gn~~~i-~~~g~g~~~~---~~~~la~~i~~ll~~ 347 (382)
T PLN02605 278 EWMGACDC--IITKAGPGTIAEALIRGLPIILNGYIPGQEEGNVPYV-VDNGFGAFSE---SPKEIARIVAEWFGD 347 (382)
T ss_pred HHHHhCCE--EEECCCcchHHHHHHcCCCEEEecCCCccchhhHHHH-HhCCceeecC---CHHHHHHHHHHHHcC
Confidence 8888888 999999999999999999999999776776 689888 7789998763 899999999999987
No 37
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=99.00 E-value=2.4e-08 Score=94.18 Aligned_cols=144 Identities=13% Similarity=0.217 Sum_probs=100.6
Q ss_pred CCceEEEEeCCccccCHHHHHHHHHHHH-c-CCCCEEEEEcCCCCCCCCCCCChhhhhh--hcCCeEEeeccchh-hhhc
Q 022329 103 ANSVVYVNYGSITVMTEQHLTEFAWGLA-N-SKRPFLWILRPDVVMGDSVVLPDEYFEE--IKDRGFIVSWCNQE-QVLS 177 (299)
Q Consensus 103 ~~~vvyvs~GS~~~~~~~~~~~i~~al~-~-~~~~~lw~~~~~~~~~~~~~l~~~~~~~--~~~~~~v~~w~pq~-~iL~ 177 (299)
++++|++..|+... .+.+..+++++. . .+.+++++.+.+. .+-+.+.+. ..+++.+.+|.++. .+++
T Consensus 201 ~~~~ilv~~G~lg~--~k~~~~li~~~~~~~~~~~~vvv~G~~~------~l~~~l~~~~~~~~~v~~~G~~~~~~~~~~ 272 (391)
T PRK13608 201 DKQTILMSAGAFGV--SKGFDTMITDILAKSANAQVVMICGKSK------ELKRSLTAKFKSNENVLILGYTKHMNEWMA 272 (391)
T ss_pred CCCEEEEECCCccc--chhHHHHHHHHHhcCCCceEEEEcCCCH------HHHHHHHHHhccCCCeEEEeccchHHHHHH
Confidence 46788888888752 234455555543 2 2456666655331 011122221 13578888999766 4888
Q ss_pred CCCcCceeeccCchhhhhhhhcCcCeeec-cCCcChHhHHHHHHHHhCcEEEecCCCCHHHHHHHHHHHhcCCh-hHHHH
Q 022329 178 HPSVGAFLTHCGWNSTMESICGGVPVICW-PFFAEQQTNCRYACTTWGIGMEVNHDVKRGDIEALVKEMMDGDE-GKKMR 255 (299)
Q Consensus 178 ~~~v~~~ItHgG~~s~~Eal~~GvP~i~~-P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~i~~av~~vl~~~~-~~~~r 255 (299)
.+++ ||+..|..|+.||+++|+|+|+. |.-+.|..|+..+ ++.|+|+... +.+++.++|.++++|++ .++++
T Consensus 273 ~aDl--~I~k~gg~tl~EA~a~G~PvI~~~~~pgqe~~N~~~~-~~~G~g~~~~---~~~~l~~~i~~ll~~~~~~~~m~ 346 (391)
T PRK13608 273 SSQL--MITKPGGITISEGLARCIPMIFLNPAPGQELENALYF-EEKGFGKIAD---TPEEAIKIVASLTNGNEQLTNMI 346 (391)
T ss_pred hhhE--EEeCCchHHHHHHHHhCCCEEECCCCCCcchhHHHHH-HhCCcEEEeC---CHHHHHHHHHHHhcCHHHHHHHH
Confidence 8888 99998889999999999999998 6666677899998 8999998875 88999999999998752 22344
Q ss_pred HHHHH
Q 022329 256 QKAWE 260 (299)
Q Consensus 256 ~~a~~ 260 (299)
+++++
T Consensus 347 ~~~~~ 351 (391)
T PRK13608 347 STMEQ 351 (391)
T ss_pred HHHHH
Confidence 44443
No 38
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=98.83 E-value=4.1e-08 Score=88.45 Aligned_cols=103 Identities=16% Similarity=0.161 Sum_probs=76.8
Q ss_pred ceEEEEeCCccccCHHHHHHHHHHHHcC--CCCEEEEEcCCCCCCCCCCCChhhhhh--hcCCeEEeeccchh-hhhcCC
Q 022329 105 SVVYVNYGSITVMTEQHLTEFAWGLANS--KRPFLWILRPDVVMGDSVVLPDEYFEE--IKDRGFIVSWCNQE-QVLSHP 179 (299)
Q Consensus 105 ~vvyvs~GS~~~~~~~~~~~i~~al~~~--~~~~lw~~~~~~~~~~~~~l~~~~~~~--~~~~~~v~~w~pq~-~iL~~~ 179 (299)
+.|+++||..... .....++++|.+. +.++.++++... ...+.+.+. ...|+.+..|.++. .++..+
T Consensus 171 ~~iLi~~GG~d~~--~~~~~~l~~l~~~~~~~~i~vv~G~~~------~~~~~l~~~~~~~~~i~~~~~~~~m~~lm~~a 242 (279)
T TIGR03590 171 RRVLVSFGGADPD--NLTLKLLSALAESQINISITLVTGSSN------PNLDELKKFAKEYPNIILFIDVENMAELMNEA 242 (279)
T ss_pred CeEEEEeCCcCCc--CHHHHHHHHHhccccCceEEEEECCCC------cCHHHHHHHHHhCCCEEEEeCHHHHHHHHHHC
Confidence 5789999976432 2445666777653 467778777542 111222222 13578899999987 599899
Q ss_pred CcCceeeccCchhhhhhhhcCcCeeeccCCcChHhHHHH
Q 022329 180 SVGAFLTHCGWNSTMESICGGVPVICWPFFAEQQTNCRY 218 (299)
Q Consensus 180 ~v~~~ItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~ 218 (299)
++ +||+|| +|++|+++.|+|+|++|...+|..||+.
T Consensus 243 Dl--~Is~~G-~T~~E~~a~g~P~i~i~~~~nQ~~~a~~ 278 (279)
T TIGR03590 243 DL--AIGAAG-STSWERCCLGLPSLAICLAENQQSNSQQ 278 (279)
T ss_pred CE--EEECCc-hHHHHHHHcCCCEEEEEecccHHHHhhh
Confidence 98 999999 9999999999999999999999999874
No 39
>TIGR03492 conserved hypothetical protein. This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown.
Probab=98.80 E-value=5.5e-07 Score=85.13 Aligned_cols=178 Identities=13% Similarity=0.088 Sum_probs=110.3
Q ss_pred cCccEEEEcCcccccHHHHHHHHhcCCcEEEeC-CccCcchhhhhhhhhcCCCCCccccchhHHhhccCCCCceEEEEeC
Q 022329 34 FKSSAIIFNTFDEFEHEALEVIASKFPNIYTVG-PLPLLCKQVVEAKFRSFGSSLWKEDTDCLKWLDKRDANSVVYVNYG 112 (299)
Q Consensus 34 ~~~~~~l~ns~~~le~~~~~~~r~~~p~v~~VG-pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~vvyvs~G 112 (299)
+.|+.+++.+ ...-++++...-++.+|| |+...-.. ... .. + .++.++|.+--|
T Consensus 159 ~~a~~v~~~~-----~~t~~~l~~~g~k~~~vGnPv~d~l~~---------------~~~--~~-l--~~~~~~lllLpG 213 (396)
T TIGR03492 159 RRCLAVFVRD-----RLTARDLRRQGVRASYLGNPMMDGLEP---------------PER--KP-L--LTGRFRIALLPG 213 (396)
T ss_pred hhhCEEeCCC-----HHHHHHHHHCCCeEEEeCcCHHhcCcc---------------ccc--cc-c--CCCCCEEEEECC
Confidence 5677777776 333344555444899999 55422110 000 01 1 123567888889
Q ss_pred CccccCHHHHHHHHHHHHc----CCCCEEEEEcCCCCCCCCCCCChhhhhhh-------------------cCCeEEeec
Q 022329 113 SITVMTEQHLTEFAWGLAN----SKRPFLWILRPDVVMGDSVVLPDEYFEEI-------------------KDRGFIVSW 169 (299)
Q Consensus 113 S~~~~~~~~~~~i~~al~~----~~~~~lw~~~~~~~~~~~~~l~~~~~~~~-------------------~~~~~v~~w 169 (299)
|...-....+..+++++.. .+..|++.+.+... .+.+.+.. .+++.+..+
T Consensus 214 SR~ae~~~~lp~~l~al~~L~~~~~~~~v~~~~~~~~-------~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~v~~~ 286 (396)
T TIGR03492 214 SRPPEAYRNLKLLLRALEALPDSQPFVFLAAIVPSLS-------LEKLQAILEDLGWQLEGSSEDQTSLFQKGTLEVLLG 286 (396)
T ss_pred CCHHHHHccHHHHHHHHHHHhhCCCeEEEEEeCCCCC-------HHHHHHHHHhcCceecCCccccchhhccCceEEEec
Confidence 9843222333445555443 36678887732210 01111111 122445555
Q ss_pred cch-hhhhcCCCcCceeeccCchhhhhhhhcCcCeeeccCCcChHhHHHHHHHHh----CcEEEecCCCCHHHHHHHHHH
Q 022329 170 CNQ-EQVLSHPSVGAFLTHCGWNSTMESICGGVPVICWPFFAEQQTNCRYACTTW----GIGMEVNHDVKRGDIEALVKE 244 (299)
Q Consensus 170 ~pq-~~iL~~~~v~~~ItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~----g~G~~l~~~~~~~~i~~av~~ 244 (299)
..+ ..+++.+++ +|+..|..| .|++..|+|+|++|.-..|. |+... ++. |.++.+. +.+.+.+.+++.+
T Consensus 287 ~~~~~~~l~~ADl--vI~rSGt~T-~E~a~lg~P~Ilip~~~~q~-na~~~-~~~~~l~g~~~~l~-~~~~~~l~~~l~~ 360 (396)
T TIGR03492 287 RGAFAEILHWADL--GIAMAGTAT-EQAVGLGKPVIQLPGKGPQF-TYGFA-EAQSRLLGGSVFLA-SKNPEQAAQVVRQ 360 (396)
T ss_pred hHhHHHHHHhCCE--EEECcCHHH-HHHHHhCCCEEEEeCCCCHH-HHHHH-HhhHhhcCCEEecC-CCCHHHHHHHHHH
Confidence 544 458888888 999999877 99999999999999877786 98776 553 6666665 4567999999999
Q ss_pred HhcCC
Q 022329 245 MMDGD 249 (299)
Q Consensus 245 vl~~~ 249 (299)
+++|+
T Consensus 361 ll~d~ 365 (396)
T TIGR03492 361 LLADP 365 (396)
T ss_pred HHcCH
Confidence 99876
No 40
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=98.79 E-value=1.6e-07 Score=86.56 Aligned_cols=76 Identities=16% Similarity=0.336 Sum_probs=65.7
Q ss_pred chhhhhcCCCcCceeeccCchhhhhhhhcCcCeeeccCC---cChHhHHHHHHHHhCcEEEecC-CCCHHHHHHHHHHHh
Q 022329 171 NQEQVLSHPSVGAFLTHCGWNSTMESICGGVPVICWPFF---AEQQTNCRYACTTWGIGMEVNH-DVKRGDIEALVKEMM 246 (299)
Q Consensus 171 pq~~iL~~~~v~~~ItHgG~~s~~Eal~~GvP~i~~P~~---~DQ~~na~~v~~~~g~G~~l~~-~~~~~~i~~av~~vl 246 (299)
+-..+++.+++ +|+++|.++++||+++|+|+|++|.- .+|..|+..+ ...+.|..+.. +.+.+++.+++.+++
T Consensus 243 ~~~~~l~~ad~--~v~~~g~~~l~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~i-~~~~~G~~~~~~~~~~~~l~~~i~~ll 319 (348)
T TIGR01133 243 NMAAAYAAADL--VISRAGASTVAELAAAGVPAILIPYPYAADDQYYNAKFL-EDLGAGLVIRQKELLPEKLLEALLKLL 319 (348)
T ss_pred CHHHHHHhCCE--EEECCChhHHHHHHHcCCCEEEeeCCCCccchhhHHHHH-HHCCCEEEEecccCCHHHHHHHHHHHH
Confidence 44568888888 99999988999999999999999863 4688899888 78899998865 567999999999999
Q ss_pred cCC
Q 022329 247 DGD 249 (299)
Q Consensus 247 ~~~ 249 (299)
+|+
T Consensus 320 ~~~ 322 (348)
T TIGR01133 320 LDP 322 (348)
T ss_pred cCH
Confidence 876
No 41
>TIGR00215 lpxB lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA
Probab=98.64 E-value=3e-07 Score=86.66 Aligned_cols=164 Identities=9% Similarity=0.004 Sum_probs=102.0
Q ss_pred CCCceEEEEeCCccccCHHHHHHHHHHHHc---C--CCCEEEEEcCCCCCCCCCCCChhhhhhh--cCCeEEeeccchhh
Q 022329 102 DANSVVYVNYGSITVMTEQHLTEFAWGLAN---S--KRPFLWILRPDVVMGDSVVLPDEYFEEI--KDRGFIVSWCNQEQ 174 (299)
Q Consensus 102 ~~~~vvyvs~GS~~~~~~~~~~~i~~al~~---~--~~~~lw~~~~~~~~~~~~~l~~~~~~~~--~~~~~v~~w~pq~~ 174 (299)
+++++|.+--||...--......+++++.. . +.++++....... ...+ +.+.+.. ..++.+..+ ....
T Consensus 189 ~~~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~~~~p~~~~vi~~~~~~~---~~~~-~~~~~~~~~~~~v~~~~~-~~~~ 263 (385)
T TIGR00215 189 HNGETLALLPGSRGSEVEKLFPLFLKAAQLLEQQEPDLRRVLPVVNFKR---RLQF-EQIKAEYGPDLQLHLIDG-DARK 263 (385)
T ss_pred CCCCEEEEECCCCHHHHHHhHHHHHHHHHHHHHhCCCeEEEEEeCCchh---HHHH-HHHHHHhCCCCcEEEECc-hHHH
Confidence 356788888888853223444555544432 2 3345554432100 0000 1111122 122333322 3345
Q ss_pred hhcCCCcCceeeccCchhhhhhhhcCcCeeec----cCCc---------ChHhHHHHHHHHhCcEEEecC-CCCHHHHHH
Q 022329 175 VLSHPSVGAFLTHCGWNSTMESICGGVPVICW----PFFA---------EQQTNCRYACTTWGIGMEVNH-DVKRGDIEA 240 (299)
Q Consensus 175 iL~~~~v~~~ItHgG~~s~~Eal~~GvP~i~~----P~~~---------DQ~~na~~v~~~~g~G~~l~~-~~~~~~i~~ 240 (299)
+++.+++ ||+-.|..|+ |++++|+|+|++ |+.. .|..|+..+ ...++...+.. +++++.|.+
T Consensus 264 ~l~aADl--~V~~SGt~tl-Ea~a~G~P~Vv~yk~~pl~~~~~~~~~~~~~~~~~nil-~~~~~~pel~q~~~~~~~l~~ 339 (385)
T TIGR00215 264 AMFAADA--ALLASGTAAL-EAALIKTPMVVGYRMKPLTFLIARRLVKTDYISLPNIL-ANRLLVPELLQEECTPHPLAI 339 (385)
T ss_pred HHHhCCE--EeecCCHHHH-HHHHcCCCEEEEEcCCHHHHHHHHHHHcCCeeeccHHh-cCCccchhhcCCCCCHHHHHH
Confidence 8888888 9999999988 999999999999 7632 377789888 77788888765 799999999
Q ss_pred HHHHHhcCC----h-hHHHHHHHHHHHHHHHHHHhcCCchHHH
Q 022329 241 LVKEMMDGD----E-GKKMRQKAWEWKKKAEAATAVGGQSYNN 278 (299)
Q Consensus 241 av~~vl~~~----~-~~~~r~~a~~l~~~~~~~~~~gg~s~~~ 278 (299)
.+.++|+|+ + .+++++...++.+. +.++|.+.+.
T Consensus 340 ~~~~ll~~~~~~~~~~~~~~~~~~~~~~~----l~~~~~~~~~ 378 (385)
T TIGR00215 340 ALLLLLENGLKAYKEMHRERQFFEELRQR----IYCNADSERA 378 (385)
T ss_pred HHHHHhcCCcccHHHHHHHHHHHHHHHHH----hcCCCHHHHH
Confidence 999999886 3 23455555555554 4555565543
No 42
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=98.54 E-value=1.1e-06 Score=82.23 Aligned_cols=106 Identities=9% Similarity=0.035 Sum_probs=64.1
Q ss_pred hhhhcCCCcCceeeccCchhhhhhhhcCcCeeeccCCcC--------hHhH-----HHHHHHHhCcEEEecC-CCCHHHH
Q 022329 173 EQVLSHPSVGAFLTHCGWNSTMESICGGVPVICWPFFAE--------QQTN-----CRYACTTWGIGMEVNH-DVKRGDI 238 (299)
Q Consensus 173 ~~iL~~~~v~~~ItHgG~~s~~Eal~~GvP~i~~P~~~D--------Q~~n-----a~~v~~~~g~G~~l~~-~~~~~~i 238 (299)
..+++.+++ +|+.+|.+++ |++++|+|+|+.|-..- |..| +..+ ...+++..+.. +.+++.+
T Consensus 256 ~~~~~~aDl--~v~~sG~~~l-Ea~a~G~PvI~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~l 331 (380)
T PRK00025 256 REAMAAADA--ALAASGTVTL-ELALLKVPMVVGYKVSPLTFWIAKRLVKVPYVSLPNLL-AGRELVPELLQEEATPEKL 331 (380)
T ss_pred HHHHHhCCE--EEECccHHHH-HHHHhCCCEEEEEccCHHHHHHHHHHHcCCeeehHHHh-cCCCcchhhcCCCCCHHHH
Confidence 458888888 9999998887 99999999999964321 1111 1222 22222322322 6789999
Q ss_pred HHHHHHHhcCChh-HHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHh
Q 022329 239 EALVKEMMDGDEG-KKMRQKAWEWKKKAEAATAVGGQSYNNFDRLVKMVLQ 288 (299)
Q Consensus 239 ~~av~~vl~~~~~-~~~r~~a~~l~~~~~~~~~~gg~s~~~l~~li~~l~~ 288 (299)
.+++.++++|++. ++++++++++.+. . ..+. ...+.++|..+..
T Consensus 332 ~~~i~~ll~~~~~~~~~~~~~~~~~~~----~-~~~a-~~~~~~~i~~~~~ 376 (380)
T PRK00025 332 ARALLPLLADGARRQALLEGFTELHQQ----L-RCGA-DERAAQAVLELLK 376 (380)
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHHH----h-CCCH-HHHHHHHHHHHhh
Confidence 9999999998731 2333444333333 2 3343 3444555555443
No 43
>COG4671 Predicted glycosyl transferase [General function prediction only]
Probab=98.42 E-value=5.8e-06 Score=74.99 Aligned_cols=183 Identities=11% Similarity=0.105 Sum_probs=122.0
Q ss_pred ccEEEEcCcccccHHHHHHH--HhcCCcEEEeCCccCcchhhhhhhhhcCCCCCccccchhHHhhccCCCCceEEEEeCC
Q 022329 36 SSAIIFNTFDEFEHEALEVI--ASKFPNIYTVGPLPLLCKQVVEAKFRSFGSSLWKEDTDCLKWLDKRDANSVVYVNYGS 113 (299)
Q Consensus 36 ~~~~l~ns~~~le~~~~~~~--r~~~p~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~vvyvs~GS 113 (299)
-|.+++-..+++-.+.-.|. .....++.|+|=+ .++-+.. ++|. ... +++..|.||-|-
T Consensus 168 yD~V~v~GdP~f~d~~~~~~~~~~i~~k~~ytG~v-q~~~~~~-----~~p~------------~~~-pE~~~Ilvs~GG 228 (400)
T COG4671 168 YDLVLVYGDPDFYDPLTEFPFAPAIRAKMRYTGFV-QRSLPHL-----PLPP------------HEA-PEGFDILVSVGG 228 (400)
T ss_pred heEEEEecCccccChhhcCCccHhhhhheeEeEEe-eccCcCC-----CCCC------------cCC-CccceEEEecCC
Confidence 47788877666555432221 1222479999987 2221110 1111 111 344567788776
Q ss_pred ccccCHHHHHHHHHHHHc-CCCC--EEEEEcCCCCCCCCCCCChhhhhhh----c--CCeEEeeccchhh-hhcCCCcCc
Q 022329 114 ITVMTEQHLTEFAWGLAN-SKRP--FLWILRPDVVMGDSVVLPDEYFEEI----K--DRGFIVSWCNQEQ-VLSHPSVGA 183 (299)
Q Consensus 114 ~~~~~~~~~~~i~~al~~-~~~~--~lw~~~~~~~~~~~~~l~~~~~~~~----~--~~~~v~~w~pq~~-iL~~~~v~~ 183 (299)
.. ...+.+...+.|-.. .+.+ .+.++++. .|....+.+ + +++.+..|-.+.. ++..++.
T Consensus 229 G~-dG~eLi~~~l~A~~~l~~l~~~~~ivtGP~--------MP~~~r~~l~~~A~~~p~i~I~~f~~~~~~ll~gA~~-- 297 (400)
T COG4671 229 GA-DGAELIETALAAAQLLAGLNHKWLIVTGPF--------MPEAQRQKLLASAPKRPHISIFEFRNDFESLLAGARL-- 297 (400)
T ss_pred Ch-hhHHHHHHHHHHhhhCCCCCcceEEEeCCC--------CCHHHHHHHHHhcccCCCeEEEEhhhhHHHHHHhhhe--
Confidence 54 234556666665543 3333 44444432 454433332 3 6788888876664 8877777
Q ss_pred eeeccCchhhhhhhhcCcCeeeccCC---cChHhHHHHHHHHhCcEEEecC-CCCHHHHHHHHHHHhcCC
Q 022329 184 FLTHCGWNSTMESICGGVPVICWPFF---AEQQTNCRYACTTWGIGMEVNH-DVKRGDIEALVKEMMDGD 249 (299)
Q Consensus 184 ~ItHgG~~s~~Eal~~GvP~i~~P~~---~DQ~~na~~v~~~~g~G~~l~~-~~~~~~i~~av~~vl~~~ 249 (299)
+|+-||+||++|-+.+|+|.+++|.. -+|-.-|.++ +++|+.-.+.. ++++..+.+++...++.+
T Consensus 298 vVSm~GYNTvCeILs~~k~aLivPr~~p~eEQliRA~Rl-~~LGL~dvL~pe~lt~~~La~al~~~l~~P 366 (400)
T COG4671 298 VVSMGGYNTVCEILSFGKPALIVPRAAPREEQLIRAQRL-EELGLVDVLLPENLTPQNLADALKAALARP 366 (400)
T ss_pred eeecccchhhhHHHhCCCceEEeccCCCcHHHHHHHHHH-HhcCcceeeCcccCChHHHHHHHHhcccCC
Confidence 99999999999999999999999985 3899999999 99998888877 799999999999998733
No 44
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=98.33 E-value=0.00018 Score=65.42 Aligned_cols=128 Identities=13% Similarity=0.110 Sum_probs=84.4
Q ss_pred ceEEEEeCCccc-cCHHHHHHHHHHHHcC-CCCEEEEEcCCCCCCCCCCCChhhhhhhcCCeEEeeccchhh---hhcCC
Q 022329 105 SVVYVNYGSITV-MTEQHLTEFAWGLANS-KRPFLWILRPDVVMGDSVVLPDEYFEEIKDRGFIVSWCNQEQ---VLSHP 179 (299)
Q Consensus 105 ~vvyvs~GS~~~-~~~~~~~~i~~al~~~-~~~~lw~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~w~pq~~---iL~~~ 179 (299)
+.+++..|+... -..+.+.+++..+... +..+++.-.... ...+ .....|+.+.+|+++.. +++.+
T Consensus 197 ~~~i~~~G~~~~~k~~~~~i~~~~~l~~~~~~~l~i~G~~~~--------~~~~-~~~~~~v~~~g~~~~~~~~~~~~~~ 267 (364)
T cd03814 197 RPVLLYVGRLAPEKNLEALLDADLPLRRRPPVRLVIVGDGPA--------RARL-EARYPNVHFLGFLDGEELAAAYASA 267 (364)
T ss_pred CeEEEEEeccccccCHHHHHHHHHHhhhcCCceEEEEeCCch--------HHHH-hccCCcEEEEeccCHHHHHHHHHhC
Confidence 456677787642 2334444444444332 345554433211 0111 12357889999998775 78888
Q ss_pred CcCceeeccC----chhhhhhhhcCcCeeeccCCcChHhHHHHHHHHhCcEEEecCCCCHHHHHHHHHHHhcCC
Q 022329 180 SVGAFLTHCG----WNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVKRGDIEALVKEMMDGD 249 (299)
Q Consensus 180 ~v~~~ItHgG----~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~i~~av~~vl~~~ 249 (299)
++ +|..+. .++++||+++|+|+|+.+..+ +...+ +..+.|..+. .-+.+++.+++.+++.|+
T Consensus 268 d~--~l~~s~~e~~~~~~lEa~a~g~PvI~~~~~~----~~~~i-~~~~~g~~~~-~~~~~~l~~~i~~l~~~~ 333 (364)
T cd03814 268 DV--FVFPSRTETFGLVVLEAMASGLPVVAPDAGG----PADIV-TDGENGLLVE-PGDAEAFAAALAALLADP 333 (364)
T ss_pred CE--EEECcccccCCcHHHHHHHcCCCEEEcCCCC----chhhh-cCCcceEEcC-CCCHHHHHHHHHHHHcCH
Confidence 88 776654 478999999999999988653 44555 6668888776 567888999999999876
No 45
>KOG3349 consensus Predicted glycosyltransferase [General function prediction only]
Probab=98.15 E-value=1.4e-05 Score=63.91 Aligned_cols=128 Identities=14% Similarity=0.059 Sum_probs=79.0
Q ss_pred ceEEEEeCCcccc---CHHHHHHHHHHHHcCCC-CEEEEEcCCCCCCCCCCCChhhhhhhc-CC--eEEeeccch-hhhh
Q 022329 105 SVVYVNYGSITVM---TEQHLTEFAWGLANSKR-PFLWILRPDVVMGDSVVLPDEYFEEIK-DR--GFIVSWCNQ-EQVL 176 (299)
Q Consensus 105 ~vvyvs~GS~~~~---~~~~~~~i~~al~~~~~-~~lw~~~~~~~~~~~~~l~~~~~~~~~-~~--~~v~~w~pq-~~iL 176 (299)
..+||+-||.... .--..++..+.|.+.|+ +.+.-++.+.. ..++....... +. +...+|-|- .+..
T Consensus 4 ~~vFVTVGtT~Fd~LI~~Vl~~~~~~~L~k~G~~kLiiQ~Grg~~-----~~~d~~~~~~k~~gl~id~y~f~psl~e~I 78 (170)
T KOG3349|consen 4 MTVFVTVGTTSFDDLISCVLSEEFLQELQKRGFTKLIIQIGRGQP-----FFGDPIDLIRKNGGLTIDGYDFSPSLTEDI 78 (170)
T ss_pred eEEEEEeccccHHHHHHHHcCHHHHHHHHHcCccEEEEEecCCcc-----CCCCHHHhhcccCCeEEEEEecCccHHHHH
Confidence 4699999998521 11123445677777776 45555664411 11222211111 11 223577786 4566
Q ss_pred cCCCcCceeeccCchhhhhhhhcCcCeeeccC----CcChHhHHHHHHHHhCcEEEecCCCCHHHHHHHHHH
Q 022329 177 SHPSVGAFLTHCGWNSTMESICGGVPVICWPF----FAEQQTNCRYACTTWGIGMEVNHDVKRGDIEALVKE 244 (299)
Q Consensus 177 ~~~~v~~~ItHgG~~s~~Eal~~GvP~i~~P~----~~DQ~~na~~v~~~~g~G~~l~~~~~~~~i~~av~~ 244 (299)
..+++ +|+|+|+||++|.+..|+|.|+++- ...|-.-|..+ ++.|-=..- ++.++-+.+.+
T Consensus 79 ~~Adl--VIsHAGaGS~letL~l~KPlivVvNd~LMDNHQ~ELA~qL-~~egyL~~C----~ps~L~~~L~~ 143 (170)
T KOG3349|consen 79 RSADL--VISHAGAGSCLETLRLGKPLIVVVNDSLMDNHQLELAKQL-AEEGYLYYC----TPSTLPAGLAK 143 (170)
T ss_pred hhccE--EEecCCcchHHHHHHcCCCEEEEeChHhhhhHHHHHHHHH-HhcCcEEEe----eccchHHHHHh
Confidence 66777 9999999999999999999999994 46788888888 555543333 33445444443
No 46
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=98.14 E-value=6.9e-05 Score=69.03 Aligned_cols=126 Identities=11% Similarity=0.115 Sum_probs=85.5
Q ss_pred EEEeCCccccCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCCCCChhhhhhhcCCeEEeeccchhh---hhcCCCcCce
Q 022329 108 YVNYGSITVMTEQHLTEFAWGLANSKRPFLWILRPDVVMGDSVVLPDEYFEEIKDRGFIVSWCNQEQ---VLSHPSVGAF 184 (299)
Q Consensus 108 yvs~GS~~~~~~~~~~~i~~al~~~~~~~lw~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~w~pq~~---iL~~~~v~~~ 184 (299)
++..|+.. ..+....+++++...+.+++++-.+. ..+.+.+...+|+.+.+|+|+.. +++.+++-++
T Consensus 198 il~~G~~~--~~K~~~~li~a~~~~~~~l~ivG~g~--------~~~~l~~~~~~~V~~~g~~~~~~~~~~~~~ad~~v~ 267 (351)
T cd03804 198 YLSVGRLV--PYKRIDLAIEAFNKLGKRLVVIGDGP--------ELDRLRAKAGPNVTFLGRVSDEELRDLYARARAFLF 267 (351)
T ss_pred EEEEEcCc--cccChHHHHHHHHHCCCcEEEEECCh--------hHHHHHhhcCCCEEEecCCCHHHHHHHHHhCCEEEE
Confidence 45567764 23446677888887777766654422 11233334568899999999854 7888888333
Q ss_pred eeccCc-hhhhhhhhcCcCeeeccCCcChHhHHHHHHHHhCcEEEecCCCCHHHHHHHHHHHhcCC
Q 022329 185 LTHCGW-NSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVKRGDIEALVKEMMDGD 249 (299)
Q Consensus 185 ItHgG~-~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~i~~av~~vl~~~ 249 (299)
-+.-|. .+++||+++|+|+|+....+ ....+ ++-+.|..+. .-+.+++.++|.++++|+
T Consensus 268 ps~e~~g~~~~Eama~G~Pvi~~~~~~----~~e~i-~~~~~G~~~~-~~~~~~la~~i~~l~~~~ 327 (351)
T cd03804 268 PAEEDFGIVPVEAMASGTPVIAYGKGG----ALETV-IDGVTGILFE-EQTVESLAAAVERFEKNE 327 (351)
T ss_pred CCcCCCCchHHHHHHcCCCEEEeCCCC----Cccee-eCCCCEEEeC-CCCHHHHHHHHHHHHhCc
Confidence 344333 46789999999999987543 23334 5556788876 357889999999999876
No 47
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=98.09 E-value=0.00059 Score=64.73 Aligned_cols=95 Identities=20% Similarity=0.217 Sum_probs=66.1
Q ss_pred CCeEEeeccchhh---hhcCCCcCceeeccC----chhhhhhhhcCcCeeeccCCcChHhHHHHHHHHhCcEEEecCCCC
Q 022329 162 DRGFIVSWCNQEQ---VLSHPSVGAFLTHCG----WNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVK 234 (299)
Q Consensus 162 ~~~~v~~w~pq~~---iL~~~~v~~~ItHgG----~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~ 234 (299)
.++.+.+|+++.+ ++...++.+||...- .++++||+++|+|+|+....+ ....+ .+-+.|..+...-+
T Consensus 289 ~~V~f~G~v~~~e~~~~~~~~~~~v~v~~S~~Eg~p~~llEAma~G~PVIas~vgg----~~e~i-~~~~~G~l~~~~~~ 363 (407)
T cd04946 289 ISVNFTGELSNSEVYKLYKENPVDVFVNLSESEGLPVSIMEAMSFGIPVIATNVGG----TPEIV-DNGGNGLLLSKDPT 363 (407)
T ss_pred ceEEEecCCChHHHHHHHhhcCCCEEEeCCccccccHHHHHHHHcCCCEEeCCCCC----cHHHh-cCCCcEEEeCCCCC
Confidence 4678899999775 455444445765443 568999999999999866533 44555 55458888875568
Q ss_pred HHHHHHHHHHHhcCCh-hHHHHHHHHHH
Q 022329 235 RGDIEALVKEMMDGDE-GKKMRQKAWEW 261 (299)
Q Consensus 235 ~~~i~~av~~vl~~~~-~~~~r~~a~~l 261 (299)
.+++.++|.++++|++ ...++++|++.
T Consensus 364 ~~~la~~I~~ll~~~~~~~~m~~~ar~~ 391 (407)
T cd04946 364 PNELVSSLSKFIDNEEEYQTMREKAREK 391 (407)
T ss_pred HHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 9999999999998652 23344444443
No 48
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=97.97 E-value=0.0031 Score=56.84 Aligned_cols=84 Identities=13% Similarity=0.047 Sum_probs=62.5
Q ss_pred cCCeEEeeccchhh---hhcCCCcCceee--ccCchhhhhhhhcCcCeeeccCCcChHhHHHHHHHHhCcEEEecCCCCH
Q 022329 161 KDRGFIVSWCNQEQ---VLSHPSVGAFLT--HCGWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVKR 235 (299)
Q Consensus 161 ~~~~~v~~w~pq~~---iL~~~~v~~~It--HgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~ 235 (299)
..++.+.+++++.. ++..+++.++.+ -|..++++||+++|+|+|+-+..+ ....+ +..+.|..+. .-+.
T Consensus 258 ~~~v~~~g~~~~~~~~~~~~~ad~~i~~~~~~~~~~~~~Ea~~~G~pvI~~~~~~----~~~~~-~~~~~g~~~~-~~~~ 331 (377)
T cd03798 258 EDRVTFLGAVPHEEVPAYYAAADVFVLPSLREGFGLVLLEAMACGLPVVATDVGG----IPEII-TDGENGLLVP-PGDP 331 (377)
T ss_pred cceEEEeCCCCHHHHHHHHHhcCeeecchhhccCChHHHHHHhcCCCEEEecCCC----hHHHh-cCCcceeEEC-CCCH
Confidence 46788999998764 677777733222 355678999999999999876543 34445 6666677776 5689
Q ss_pred HHHHHHHHHHhcCCh
Q 022329 236 GDIEALVKEMMDGDE 250 (299)
Q Consensus 236 ~~i~~av~~vl~~~~ 250 (299)
+++.+++.+++++.+
T Consensus 332 ~~l~~~i~~~~~~~~ 346 (377)
T cd03798 332 EALAEAILRLLADPW 346 (377)
T ss_pred HHHHHHHHHHhcCcH
Confidence 999999999999873
No 49
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=97.96 E-value=0.0034 Score=56.32 Aligned_cols=82 Identities=15% Similarity=0.193 Sum_probs=62.5
Q ss_pred hcCCeEEeeccchhh---hhcCCCcCceee----ccCchhhhhhhhcCcCeeeccCCcChHhHHHHHHHHhCcEEEecCC
Q 022329 160 IKDRGFIVSWCNQEQ---VLSHPSVGAFLT----HCGWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHD 232 (299)
Q Consensus 160 ~~~~~~v~~w~pq~~---iL~~~~v~~~It----HgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~ 232 (299)
...++.+.+++++.+ ++..+++ +|. -|..+++.||+++|+|+|+.+. ......+ +..+.|..+. .
T Consensus 254 ~~~~v~~~g~~~~~~~~~~~~~~di--~i~~~~~~~~~~~~~Ea~~~g~pvI~~~~----~~~~~~~-~~~~~g~~~~-~ 325 (374)
T cd03801 254 LGDRVTFLGFVPDEDLPALYAAADV--FVLPSLYEGFGLVLLEAMAAGLPVVASDV----GGIPEVV-EDGETGLLVP-P 325 (374)
T ss_pred CCcceEEEeccChhhHHHHHHhcCE--EEecchhccccchHHHHHHcCCcEEEeCC----CChhHHh-cCCcceEEeC-C
Confidence 357888999997554 7878887 552 3556789999999999999876 2345555 5567787776 4
Q ss_pred CCHHHHHHHHHHHhcCC
Q 022329 233 VKRGDIEALVKEMMDGD 249 (299)
Q Consensus 233 ~~~~~i~~av~~vl~~~ 249 (299)
.+.+++.+++.++++++
T Consensus 326 ~~~~~l~~~i~~~~~~~ 342 (374)
T cd03801 326 GDPEALAEAILRLLDDP 342 (374)
T ss_pred CCHHHHHHHHHHHHcCh
Confidence 56899999999999876
No 50
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=97.93 E-value=0.0022 Score=61.02 Aligned_cols=93 Identities=13% Similarity=0.143 Sum_probs=64.2
Q ss_pred eEEeeccchh-hhhcCCCcCceeec-----cCchhhhhhhhcCcCeeeccCCcChHhHHHHHHHHhCcEEEecCCCCHHH
Q 022329 164 GFIVSWCNQE-QVLSHPSVGAFLTH-----CGWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVKRGD 237 (299)
Q Consensus 164 ~~v~~w~pq~-~iL~~~~v~~~ItH-----gG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~ 237 (299)
+++.+...+. .+++.+++ ++.. +|..+++||+++|+|+|+-|..+++......+ .+.|.++... +.++
T Consensus 304 v~l~~~~~el~~~y~~aDi--~~v~~S~~e~~g~~~lEAma~G~PVI~g~~~~~~~e~~~~~-~~~g~~~~~~---d~~~ 377 (425)
T PRK05749 304 VLLGDTMGELGLLYAIADI--AFVGGSLVKRGGHNPLEPAAFGVPVISGPHTFNFKEIFERL-LQAGAAIQVE---DAED 377 (425)
T ss_pred EEEEecHHHHHHHHHhCCE--EEECCCcCCCCCCCHHHHHHhCCCEEECCCccCHHHHHHHH-HHCCCeEEEC---CHHH
Confidence 4444443333 36777776 4331 34446999999999999999988888877766 5668777654 7899
Q ss_pred HHHHHHHHhcCCh-hHHHHHHHHHHH
Q 022329 238 IEALVKEMMDGDE-GKKMRQKAWEWK 262 (299)
Q Consensus 238 i~~av~~vl~~~~-~~~~r~~a~~l~ 262 (299)
+.+++.++++|++ .+++.+++++..
T Consensus 378 La~~l~~ll~~~~~~~~m~~~a~~~~ 403 (425)
T PRK05749 378 LAKAVTYLLTDPDARQAYGEAGVAFL 403 (425)
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 9999999998763 234445554443
No 51
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=97.89 E-value=0.00025 Score=64.74 Aligned_cols=142 Identities=16% Similarity=0.157 Sum_probs=89.1
Q ss_pred ceEEEEeCCccccCHHHHHHHHHHHHcCC-CCEEEEEcCCCCCCCCCCCChhhhh-----hhcCCeEEeeccchhh---h
Q 022329 105 SVVYVNYGSITVMTEQHLTEFAWGLANSK-RPFLWILRPDVVMGDSVVLPDEYFE-----EIKDRGFIVSWCNQEQ---V 175 (299)
Q Consensus 105 ~vvyvs~GS~~~~~~~~~~~i~~al~~~~-~~~lw~~~~~~~~~~~~~l~~~~~~-----~~~~~~~v~~w~pq~~---i 175 (299)
..+++..|+.. ..+....+++++.+.. ..+++.-.+. ....+.+ ....|+.+.+|+|+.. +
T Consensus 191 ~~~i~~~G~~~--~~K~~~~li~a~~~l~~~~l~i~G~g~--------~~~~~~~~~~~~~~~~~V~~~g~v~~~~~~~~ 260 (357)
T cd03795 191 RPFFLFVGRLV--YYKGLDVLLEAAAALPDAPLVIVGEGP--------LEAELEALAAALGLLDRVRFLGRLDDEEKAAL 260 (357)
T ss_pred CcEEEEecccc--cccCHHHHHHHHHhccCcEEEEEeCCh--------hHHHHHHHHHhcCCcceEEEcCCCCHHHHHHH
Confidence 34566778764 2344566777777665 5554443321 1112211 2246899999999754 7
Q ss_pred hcCCCcCceeec---cC-chhhhhhhhcCcCeeeccCCcChHhHHHHHHHH-hCcEEEecCCCCHHHHHHHHHHHhcCCh
Q 022329 176 LSHPSVGAFLTH---CG-WNSTMESICGGVPVICWPFFAEQQTNCRYACTT-WGIGMEVNHDVKRGDIEALVKEMMDGDE 250 (299)
Q Consensus 176 L~~~~v~~~ItH---gG-~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~-~g~G~~l~~~~~~~~i~~av~~vl~~~~ 250 (299)
++.+++.++.++ -| ..+++||+++|+|+|+....+... .+ .. -+.|..+. .-+.+++.++|.++++|++
T Consensus 261 ~~~ad~~i~ps~~~~e~~g~~~~Ea~~~g~Pvi~~~~~~~~~----~i-~~~~~~g~~~~-~~d~~~~~~~i~~l~~~~~ 334 (357)
T cd03795 261 LAACDVFVFPSVERSEAFGIVLLEAMAFGKPVISTEIGTGGS----YV-NLHGVTGLVVP-PGDPAALAEAIRRLLEDPE 334 (357)
T ss_pred HHhCCEEEeCCcccccccchHHHHHHHcCCCEEecCCCCchh----HH-hhCCCceEEeC-CCCHHHHHHHHHHHHHCHH
Confidence 777888444342 23 347999999999999976654443 23 32 46777765 4589999999999998763
Q ss_pred -hHHHHHHHHHHH
Q 022329 251 -GKKMRQKAWEWK 262 (299)
Q Consensus 251 -~~~~r~~a~~l~ 262 (299)
..++++++++..
T Consensus 335 ~~~~~~~~~~~~~ 347 (357)
T cd03795 335 LRERLGEAARERA 347 (357)
T ss_pred HHHHHHHHHHHHH
Confidence 234555554433
No 52
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=97.87 E-value=0.0023 Score=58.25 Aligned_cols=94 Identities=18% Similarity=0.228 Sum_probs=63.1
Q ss_pred cCCeEEee-ccchhh---hhcCCCcCceeec----cCchhhhhhhhcCcCeeeccCCcChHhHHHHHHHHhCcEEEecCC
Q 022329 161 KDRGFIVS-WCNQEQ---VLSHPSVGAFLTH----CGWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHD 232 (299)
Q Consensus 161 ~~~~~v~~-w~pq~~---iL~~~~v~~~ItH----gG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~ 232 (299)
..++.+.+ |+|+.+ ++..+++-++-++ |..++++||+++|+|+|+.+..+ ...+ ...+.|..+. .
T Consensus 246 ~~~v~~~~~~~~~~~~~~~~~~ad~~v~ps~~e~~~~~~~~~Ea~a~G~PvI~~~~~~-----~~~i-~~~~~g~~~~-~ 318 (366)
T cd03822 246 ADRVIFINRYLPDEELPELFSAADVVVLPYRSADQTQSGVLAYAIGFGKPVISTPVGH-----AEEV-LDGGTGLLVP-P 318 (366)
T ss_pred CCcEEEecCcCCHHHHHHHHhhcCEEEecccccccccchHHHHHHHcCCCEEecCCCC-----hhee-eeCCCcEEEc-C
Confidence 46777764 588653 7777777332232 33568999999999999988754 2334 4556777775 3
Q ss_pred CCHHHHHHHHHHHhcCC-hhHHHHHHHHHH
Q 022329 233 VKRGDIEALVKEMMDGD-EGKKMRQKAWEW 261 (299)
Q Consensus 233 ~~~~~i~~av~~vl~~~-~~~~~r~~a~~l 261 (299)
-+.+++.+++.++++++ ...++++++++.
T Consensus 319 ~d~~~~~~~l~~l~~~~~~~~~~~~~~~~~ 348 (366)
T cd03822 319 GDPAALAEAIRRLLADPELAQALRARAREY 348 (366)
T ss_pred CCHHHHHHHHHHHHcChHHHHHHHHHHHHH
Confidence 47899999999999874 233444444443
No 53
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=97.86 E-value=0.0016 Score=59.32 Aligned_cols=94 Identities=17% Similarity=0.152 Sum_probs=64.8
Q ss_pred cCCeEEeeccchhh---hhcCCCcCceeec--------cCchhhhhhhhcCcCeeeccCCcChHhHHHHHHHHhCcEEEe
Q 022329 161 KDRGFIVSWCNQEQ---VLSHPSVGAFLTH--------CGWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEV 229 (299)
Q Consensus 161 ~~~~~v~~w~pq~~---iL~~~~v~~~ItH--------gG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l 229 (299)
++++.+.+++|+.+ ++.++++.++-+. |..++++||+++|+|+|+.+..+ ....+ +....|..+
T Consensus 235 ~~~v~~~g~~~~~~l~~~~~~adi~l~~s~~~~~~~~e~~~~~~~Ea~a~G~Pvi~~~~~~----~~~~i-~~~~~g~~~ 309 (355)
T cd03799 235 EDRVTLLGAKSQEEVRELLRAADLFVLPSVTAADGDREGLPVVLMEAMAMGLPVISTDVSG----IPELV-EDGETGLLV 309 (355)
T ss_pred CCeEEECCcCChHHHHHHHHhCCEEEecceecCCCCccCccHHHHHHHHcCCCEEecCCCC----cchhh-hCCCceEEe
Confidence 46888999998654 7777887333222 33578999999999999976532 22344 554578777
Q ss_pred cCCCCHHHHHHHHHHHhcCCh-hHHHHHHHHH
Q 022329 230 NHDVKRGDIEALVKEMMDGDE-GKKMRQKAWE 260 (299)
Q Consensus 230 ~~~~~~~~i~~av~~vl~~~~-~~~~r~~a~~ 260 (299)
. .-+.+++.+++.+++++++ ..++.+++++
T Consensus 310 ~-~~~~~~l~~~i~~~~~~~~~~~~~~~~a~~ 340 (355)
T cd03799 310 P-PGDPEALADAIERLLDDPELRREMGEAGRA 340 (355)
T ss_pred C-CCCHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 6 3489999999999998763 2334444443
No 54
>PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A.
Probab=97.86 E-value=0.0004 Score=66.46 Aligned_cols=140 Identities=15% Similarity=0.203 Sum_probs=80.0
Q ss_pred CCceEEEEeCCccccCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCCCCChhhhh-h-hcCCeEEeeccchhhh---hc
Q 022329 103 ANSVVYVNYGSITVMTEQHLTEFAWGLANSKRPFLWILRPDVVMGDSVVLPDEYFE-E-IKDRGFIVSWCNQEQV---LS 177 (299)
Q Consensus 103 ~~~vvyvs~GS~~~~~~~~~~~i~~al~~~~~~~lw~~~~~~~~~~~~~l~~~~~~-~-~~~~~~v~~w~pq~~i---L~ 177 (299)
+..++|.||.+....+++.+..-++-|++.+...+|..+.+... ...+-..+.+ . -++++.+.++.|+.+- +.
T Consensus 283 ~d~vvF~~fn~~~KI~p~~l~~W~~IL~~vP~S~L~L~~~~~~~--~~~l~~~~~~~Gv~~~Ri~f~~~~~~~ehl~~~~ 360 (468)
T PF13844_consen 283 EDAVVFGSFNNLFKISPETLDLWARILKAVPNSRLWLLRFPASG--EARLRRRFAAHGVDPDRIIFSPVAPREEHLRRYQ 360 (468)
T ss_dssp SSSEEEEE-S-GGG--HHHHHHHHHHHHHSTTEEEEEEETSTTH--HHHHHHHHHHTTS-GGGEEEEE---HHHHHHHGG
T ss_pred CCceEEEecCccccCCHHHHHHHHHHHHhCCCcEEEEeeCCHHH--HHHHHHHHHHcCCChhhEEEcCCCCHHHHHHHhh
Confidence 45699999999999999999999999999999999988744210 0001011111 0 1467888888886653 34
Q ss_pred CCCcCce---eeccCchhhhhhhhcCcCeeeccCCcChHhH-HHHHHHHhCcEEEecCCCCHHHHHHHHHHHhcCC
Q 022329 178 HPSVGAF---LTHCGWNSTMESICGGVPVICWPFFAEQQTN-CRYACTTWGIGMEVNHDVKRGDIEALVKEMMDGD 249 (299)
Q Consensus 178 ~~~v~~~---ItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~n-a~~v~~~~g~G~~l~~~~~~~~i~~av~~vl~~~ 249 (299)
..++ + ...+|.+|++||+++|||+|.+|--.=.-.. +..+ ..+|+.-.+- -+.++-.+..-++-+|.
T Consensus 361 ~~DI--~LDT~p~nG~TTt~dALwmGVPvVTl~G~~~~sR~~aSiL-~~lGl~ElIA--~s~~eYv~~Av~La~D~ 431 (468)
T PF13844_consen 361 LADI--CLDTFPYNGGTTTLDALWMGVPVVTLPGETMASRVGASIL-RALGLPELIA--DSEEEYVEIAVRLATDP 431 (468)
T ss_dssp G-SE--EE--SSS--SHHHHHHHHHT--EEB---SSGGGSHHHHHH-HHHT-GGGB---SSHHHHHHHHHHHHH-H
T ss_pred hCCE--EeeCCCCCCcHHHHHHHHcCCCEEeccCCCchhHHHHHHH-HHcCCchhcC--CCHHHHHHHHHHHhCCH
Confidence 4554 5 3567899999999999999999954322233 3444 7788876664 36677666666666665
No 55
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=97.81 E-value=0.0014 Score=59.33 Aligned_cols=133 Identities=14% Similarity=0.042 Sum_probs=81.0
Q ss_pred CCceEEEEeCCccccCHHHHHHHHHHHHc---CCCCEEEEEcCCCCCCCCCCCChhhhhhhcCCeEEeeccchhh---hh
Q 022329 103 ANSVVYVNYGSITVMTEQHLTEFAWGLAN---SKRPFLWILRPDVVMGDSVVLPDEYFEEIKDRGFIVSWCNQEQ---VL 176 (299)
Q Consensus 103 ~~~vvyvs~GS~~~~~~~~~~~i~~al~~---~~~~~lw~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~w~pq~~---iL 176 (299)
+.+.+++..|+... .+....+++++.. .+.++++.-..... ...........++.+.+|+++.. ++
T Consensus 189 ~~~~~i~~~G~~~~--~k~~~~li~~~~~l~~~~~~l~i~G~~~~~------~~~~~~~~~~~~v~~~g~~~~~~~~~~~ 260 (359)
T cd03823 189 GGRLRFGFIGQLTP--HKGVDLLLEAFKRLPRGDIELVIVGNGLEL------EEESYELEGDPRVEFLGAYPQEEIDDFY 260 (359)
T ss_pred CCceEEEEEecCcc--ccCHHHHHHHHHHHHhcCcEEEEEcCchhh------hHHHHhhcCCCeEEEeCCCCHHHHHHHH
Confidence 44566777888742 2223334444433 35565544332110 00000001246888999997665 68
Q ss_pred cCCCcCceeec--c-CchhhhhhhhcCcCeeeccCCcChHhHHHHHHHHhCcEEEecCCCCHHHHHHHHHHHhcCC
Q 022329 177 SHPSVGAFLTH--C-GWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVKRGDIEALVKEMMDGD 249 (299)
Q Consensus 177 ~~~~v~~~ItH--g-G~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~i~~av~~vl~~~ 249 (299)
+.+++-++-++ . ...++.||+++|+|+|+.+.. .....+ +..+.|..+. .-+.+++.+++.++++|+
T Consensus 261 ~~ad~~i~ps~~~e~~~~~~~Ea~a~G~Pvi~~~~~----~~~e~i-~~~~~g~~~~-~~d~~~l~~~i~~l~~~~ 330 (359)
T cd03823 261 AEIDVLVVPSIWPENFPLVIREALAAGVPVIASDIG----GMAELV-RDGVNGLLFP-PGDAEDLAAALERLIDDP 330 (359)
T ss_pred HhCCEEEEcCcccCCCChHHHHHHHCCCCEEECCCC----CHHHHh-cCCCcEEEEC-CCCHHHHHHHHHHHHhCh
Confidence 88888222232 3 344799999999999997653 345555 5555788776 346899999999999876
No 56
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=97.80 E-value=0.0079 Score=58.01 Aligned_cols=138 Identities=13% Similarity=0.092 Sum_probs=86.7
Q ss_pred eEEEEeCCccccCHHHHHHHHHHHHcC-CCCEEEEEcCCCCCCCCCCCChhhhhhh-cCCeEEeeccchhh---hhcCCC
Q 022329 106 VVYVNYGSITVMTEQHLTEFAWGLANS-KRPFLWILRPDVVMGDSVVLPDEYFEEI-KDRGFIVSWCNQEQ---VLSHPS 180 (299)
Q Consensus 106 vvyvs~GS~~~~~~~~~~~i~~al~~~-~~~~lw~~~~~~~~~~~~~l~~~~~~~~-~~~~~v~~w~pq~~---iL~~~~ 180 (299)
.+++..|+.. ..+.+..++++++.. +.+++++-.+. ..+.+.+.. ..++.+.+|+|+.+ +++.++
T Consensus 264 ~~i~~vGrl~--~~K~~~~li~a~~~~~~~~l~ivG~G~--------~~~~l~~~~~~~~V~f~G~v~~~ev~~~~~~aD 333 (465)
T PLN02871 264 PLIVYVGRLG--AEKNLDFLKRVMERLPGARLAFVGDGP--------YREELEKMFAGTPTVFTGMLQGDELSQAYASGD 333 (465)
T ss_pred eEEEEeCCCc--hhhhHHHHHHHHHhCCCcEEEEEeCCh--------HHHHHHHHhccCCeEEeccCCHHHHHHHHHHCC
Confidence 3445668774 344566677777765 45555443221 112222211 24688889998654 788888
Q ss_pred cCceeecc----CchhhhhhhhcCcCeeeccCCcChHhHHHHHHHH---hCcEEEecCCCCHHHHHHHHHHHhcCCh-hH
Q 022329 181 VGAFLTHC----GWNSTMESICGGVPVICWPFFAEQQTNCRYACTT---WGIGMEVNHDVKRGDIEALVKEMMDGDE-GK 252 (299)
Q Consensus 181 v~~~ItHg----G~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~---~g~G~~l~~~~~~~~i~~av~~vl~~~~-~~ 252 (299)
+ ||.-. -..+++||+++|+|+|+....+ ....+ +. -+.|..+. .-+.+++.+++.++++|++ .+
T Consensus 334 v--~V~pS~~E~~g~~vlEAmA~G~PVI~s~~gg----~~eiv-~~~~~~~~G~lv~-~~d~~~la~~i~~ll~~~~~~~ 405 (465)
T PLN02871 334 V--FVMPSESETLGFVVLEAMASGVPVVAARAGG----IPDII-PPDQEGKTGFLYT-PGDVDDCVEKLETLLADPELRE 405 (465)
T ss_pred E--EEECCcccccCcHHHHHHHcCCCEEEcCCCC----cHhhh-hcCCCCCceEEeC-CCCHHHHHHHHHHHHhCHHHHH
Confidence 8 66433 2457899999999999876532 22333 44 57888886 3578999999999998763 23
Q ss_pred HHHHHHHHH
Q 022329 253 KMRQKAWEW 261 (299)
Q Consensus 253 ~~r~~a~~l 261 (299)
++.+++++.
T Consensus 406 ~~~~~a~~~ 414 (465)
T PLN02871 406 RMGAAAREE 414 (465)
T ss_pred HHHHHHHHH
Confidence 455555543
No 57
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=97.79 E-value=0.0018 Score=60.73 Aligned_cols=93 Identities=13% Similarity=0.134 Sum_probs=65.2
Q ss_pred hcCCeEEeeccchhh---hhcCCCcCceeec----cC-chhhhhhhhcCcCeeeccCCcChHhHHHHHHHHhCcEEEecC
Q 022329 160 IKDRGFIVSWCNQEQ---VLSHPSVGAFLTH----CG-WNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNH 231 (299)
Q Consensus 160 ~~~~~~v~~w~pq~~---iL~~~~v~~~ItH----gG-~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~ 231 (299)
.+.++.+.+++|+.. +++.+++ ||.. -| ..+++||+++|+|+|+....+ +...+ +.-..|..+..
T Consensus 255 l~~~v~~~G~~~~~~l~~~~~~aDv--~v~pS~~~E~f~~~~lEAma~G~PVI~s~~gg----~~Eiv-~~~~~G~~l~~ 327 (380)
T PRK15484 255 IGDRCIMLGGQPPEKMHNYYPLADL--VVVPSQVEEAFCMVAVEAMAAGKPVLASTKGG----ITEFV-LEGITGYHLAE 327 (380)
T ss_pred cCCcEEEeCCCCHHHHHHHHHhCCE--EEeCCCCccccccHHHHHHHcCCCEEEeCCCC----cHhhc-ccCCceEEEeC
Confidence 356788899998654 6888888 5542 33 257899999999999987632 34444 55567875544
Q ss_pred CCCHHHHHHHHHHHhcCChhHHHHHHHH
Q 022329 232 DVKRGDIEALVKEMMDGDEGKKMRQKAW 259 (299)
Q Consensus 232 ~~~~~~i~~av~~vl~~~~~~~~r~~a~ 259 (299)
..+.+++.++|.++++|++..++.++++
T Consensus 328 ~~d~~~la~~I~~ll~d~~~~~~~~~ar 355 (380)
T PRK15484 328 PMTSDSIISDINRTLADPELTQIAEQAK 355 (380)
T ss_pred CCCHHHHHHHHHHHHcCHHHHHHHHHHH
Confidence 5689999999999999874333334433
No 58
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=97.74 E-value=0.00055 Score=62.33 Aligned_cols=146 Identities=20% Similarity=0.173 Sum_probs=85.7
Q ss_pred CCceEEEEeCCccc-cCHHHHHHHHHHHHcC-CCCEEEEEcCCCCCCCCCCCChhhhh----hhcCCeEEeeccchhh--
Q 022329 103 ANSVVYVNYGSITV-MTEQHLTEFAWGLANS-KRPFLWILRPDVVMGDSVVLPDEYFE----EIKDRGFIVSWCNQEQ-- 174 (299)
Q Consensus 103 ~~~vvyvs~GS~~~-~~~~~~~~i~~al~~~-~~~~lw~~~~~~~~~~~~~l~~~~~~----~~~~~~~v~~w~pq~~-- 174 (299)
.++.+++..|+... ...+.+...+..+.+. +.++++ ++... ..+.+.+ ....++.+.+++++..
T Consensus 218 ~~~~~i~~~G~~~~~k~~~~l~~~~~~l~~~~~~~l~i-~G~~~-------~~~~~~~~~~~~~~~~v~~~g~~~~~~~~ 289 (394)
T cd03794 218 DDKFVVLYAGNIGRAQGLDTLLEAAALLKDRPDIRFLI-VGDGP-------EKEELKELAKALGLDNVTFLGRVPKEELP 289 (394)
T ss_pred CCcEEEEEecCcccccCHHHHHHHHHHHhhcCCeEEEE-eCCcc-------cHHHHHHHHHHcCCCcEEEeCCCChHHHH
Confidence 34566777888742 2233333444444333 455444 33221 1122221 1236788889998665
Q ss_pred -hhcCCCcCceeeccC-------chhhhhhhhcCcCeeeccCCcChHhHHHHHHHHhCcEEEecCCCCHHHHHHHHHHHh
Q 022329 175 -VLSHPSVGAFLTHCG-------WNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVKRGDIEALVKEMM 246 (299)
Q Consensus 175 -iL~~~~v~~~ItHgG-------~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~i~~av~~vl 246 (299)
++..+++.++-++.+ -+++.||+++|+|+|+.+..+.+.. + ...+.|..+. .-+.+++.+++.+++
T Consensus 290 ~~~~~~di~i~~~~~~~~~~~~~p~~~~Ea~~~G~pvi~~~~~~~~~~----~-~~~~~g~~~~-~~~~~~l~~~i~~~~ 363 (394)
T cd03794 290 ELLAAADVGLVPLKPGPAFEGVSPSKLFEYMAAGKPVLASVDGESAEL----V-EEAGAGLVVP-PGDPEALAAAILELL 363 (394)
T ss_pred HHHHhhCeeEEeccCcccccccCchHHHHHHHCCCcEEEecCCCchhh----h-ccCCcceEeC-CCCHHHHHHHHHHHH
Confidence 677888733323321 3347999999999999988654433 2 3336777775 348899999999999
Q ss_pred cCCh-hHHHHHHHHHHH
Q 022329 247 DGDE-GKKMRQKAWEWK 262 (299)
Q Consensus 247 ~~~~-~~~~r~~a~~l~ 262 (299)
+|++ .+++++++++..
T Consensus 364 ~~~~~~~~~~~~~~~~~ 380 (394)
T cd03794 364 DDPEERAEMGENGRRYV 380 (394)
T ss_pred hChHHHHHHHHHHHHHH
Confidence 7653 234445544433
No 59
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=97.74 E-value=0.0044 Score=55.65 Aligned_cols=146 Identities=16% Similarity=0.115 Sum_probs=84.4
Q ss_pred CCceEEEEeCCccc-cCHHHHHHHHHHHHc--CCCCEEEEEcCCCCCCCCCCCChhh-hh--hhcCCeEEeeccchh-hh
Q 022329 103 ANSVVYVNYGSITV-MTEQHLTEFAWGLAN--SKRPFLWILRPDVVMGDSVVLPDEY-FE--EIKDRGFIVSWCNQE-QV 175 (299)
Q Consensus 103 ~~~vvyvs~GS~~~-~~~~~~~~i~~al~~--~~~~~lw~~~~~~~~~~~~~l~~~~-~~--~~~~~~~v~~w~pq~-~i 175 (299)
+++.+++..|+... ...+.+.+.+..+.+ .+..+++.-+.... ...... .. ....++.+.++..+. .+
T Consensus 186 ~~~~~i~~~G~~~~~k~~~~li~~~~~l~~~~~~~~l~i~G~~~~~-----~~~~~~~~~~~~~~~~v~~~g~~~~~~~~ 260 (359)
T cd03808 186 EDDPVFLFVARLLKDKGIDELLEAARILKAKGPNVRLLLVGDGDEE-----NPAAILEIEKLGLEGRVEFLGFRDDVPEL 260 (359)
T ss_pred CCCcEEEEEeccccccCHHHHHHHHHHHHhcCCCeEEEEEcCCCcc-----hhhHHHHHHhcCCcceEEEeeccccHHHH
Confidence 34567778888742 233444444444443 33455444332210 000000 11 123567777775443 48
Q ss_pred hcCCCcCceeecc----CchhhhhhhhcCcCeeeccCCcChHhHHHHHHHHhCcEEEecCCCCHHHHHHHHHHHhcCCh-
Q 022329 176 LSHPSVGAFLTHC----GWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVKRGDIEALVKEMMDGDE- 250 (299)
Q Consensus 176 L~~~~v~~~ItHg----G~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~i~~av~~vl~~~~- 250 (299)
+..+++ +|.-. -.++++||+++|+|+|+.+..+ +...+ ++.+.|..+. .-+.+++.+++.+++.+++
T Consensus 261 ~~~adi--~i~ps~~e~~~~~~~Ea~~~G~Pvi~s~~~~----~~~~i-~~~~~g~~~~-~~~~~~~~~~i~~l~~~~~~ 332 (359)
T cd03808 261 LAAADV--FVLPSYREGLPRVLLEAMAMGRPVIATDVPG----CREAV-IDGVNGFLVP-PGDAEALADAIERLIEDPEL 332 (359)
T ss_pred HHhccE--EEecCcccCcchHHHHHHHcCCCEEEecCCC----chhhh-hcCcceEEEC-CCCHHHHHHHHHHHHhCHHH
Confidence 888887 65433 2678999999999999976543 34445 5557787775 4578999999999988763
Q ss_pred hHHHHHHHHHH
Q 022329 251 GKKMRQKAWEW 261 (299)
Q Consensus 251 ~~~~r~~a~~l 261 (299)
..++.+++++.
T Consensus 333 ~~~~~~~~~~~ 343 (359)
T cd03808 333 RARMGQAARKR 343 (359)
T ss_pred HHHHHHHHHHH
Confidence 22344444443
No 60
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st
Probab=97.74 E-value=0.0003 Score=65.06 Aligned_cols=134 Identities=16% Similarity=0.132 Sum_probs=83.3
Q ss_pred CCceEEEEeCCcccc-CHHHHHHHHHHHHcCCC-CEEEEEcCCCCCCCCCCCChhhhhhh---cCCeEEeeccchh---h
Q 022329 103 ANSVVYVNYGSITVM-TEQHLTEFAWGLANSKR-PFLWILRPDVVMGDSVVLPDEYFEEI---KDRGFIVSWCNQE---Q 174 (299)
Q Consensus 103 ~~~vvyvs~GS~~~~-~~~~~~~i~~al~~~~~-~~lw~~~~~~~~~~~~~l~~~~~~~~---~~~~~v~~w~pq~---~ 174 (299)
++++|++.+|..... ..+.+..+++++..... ++.++...... ....+ ....... .+++.+.+..++. .
T Consensus 197 ~~~~vlv~~~r~~~~~~~k~~~~l~~al~~l~~~~~~vi~~~~~~--~~~~l-~~~~~~~~~~~~~v~~~~~~~~~~~~~ 273 (363)
T cd03786 197 PKKYILVTLHRVENVDDGEQLEEILEALAELAEEDVPVVFPNHPR--TRPRI-REAGLEFLGHHPNVLLISPLGYLYFLL 273 (363)
T ss_pred CCCEEEEEeCCccccCChHHHHHHHHHHHHHHhcCCEEEEECCCC--hHHHH-HHHHHhhccCCCCEEEECCcCHHHHHH
Confidence 456777788876433 45667788888876432 24333322100 00011 1111112 3577777655443 3
Q ss_pred hhcCCCcCceeeccCchhhhhhhhcCcCeeeccCCcChHhHHHHHHHHhCcEEEecCCCCHHHHHHHHHHHhcCC
Q 022329 175 VLSHPSVGAFLTHCGWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVKRGDIEALVKEMMDGD 249 (299)
Q Consensus 175 iL~~~~v~~~ItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~i~~av~~vl~~~ 249 (299)
++..+++ ||+..| +.+.|++++|+|+|+++.. |. +..+ .+.|++..+. -+.+++.+++.++++++
T Consensus 274 l~~~ad~--~v~~Sg-gi~~Ea~~~g~PvI~~~~~--~~--~~~~-~~~g~~~~~~--~~~~~i~~~i~~ll~~~ 338 (363)
T cd03786 274 LLKNADL--VLTDSG-GIQEEASFLGVPVLNLRDR--TE--RPET-VESGTNVLVG--TDPEAILAAIEKLLSDE 338 (363)
T ss_pred HHHcCcE--EEEcCc-cHHhhhhhcCCCEEeeCCC--Cc--cchh-hheeeEEecC--CCHHHHHHHHHHHhcCc
Confidence 5767888 999998 7778999999999998743 22 3334 4567776664 26899999999999876
No 61
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=97.73 E-value=0.00078 Score=61.15 Aligned_cols=95 Identities=14% Similarity=0.168 Sum_probs=66.3
Q ss_pred cCCeEEeeccchhh---hhcCCCcCceeec----cCchhhhhhhhcCcCeeeccCCcChHhHHHHHHHHhCcEEEecCCC
Q 022329 161 KDRGFIVSWCNQEQ---VLSHPSVGAFLTH----CGWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDV 233 (299)
Q Consensus 161 ~~~~~v~~w~pq~~---iL~~~~v~~~ItH----gG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~ 233 (299)
.+++.+.+++|+.. ++..+++ +|.. +...++.||+++|+|+|+.+.. ..+..+ +..+.|..+.. -
T Consensus 258 ~~~v~~~g~~~~~~~~~~~~~ad~--~l~~s~~e~~~~~~~Ea~~~g~PvI~~~~~----~~~~~i-~~~~~g~~~~~-~ 329 (374)
T cd03817 258 ADRVIFTGFVPREELPDYYKAADL--FVFASTTETQGLVLLEAMAAGLPVVAVDAP----GLPDLV-ADGENGFLFPP-G 329 (374)
T ss_pred CCcEEEeccCChHHHHHHHHHcCE--EEecccccCcChHHHHHHHcCCcEEEeCCC----Chhhhe-ecCceeEEeCC-C
Confidence 46888999999765 6878888 5533 3357899999999999997653 344555 56578888864 2
Q ss_pred CHHHHHHHHHHHhcCCh-hHHHHHHHHHHHHH
Q 022329 234 KRGDIEALVKEMMDGDE-GKKMRQKAWEWKKK 264 (299)
Q Consensus 234 ~~~~i~~av~~vl~~~~-~~~~r~~a~~l~~~ 264 (299)
+. ++.+++.+++++++ ...+.+++++..+.
T Consensus 330 ~~-~~~~~i~~l~~~~~~~~~~~~~~~~~~~~ 360 (374)
T cd03817 330 DE-ALAEALLRLLQDPELRRRLSKNAEESAEK 360 (374)
T ss_pred CH-HHHHHHHHHHhChHHHHHHHHHHHHHHHH
Confidence 22 89999999998763 22355555544443
No 62
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=97.71 E-value=0.00087 Score=62.40 Aligned_cols=128 Identities=12% Similarity=0.127 Sum_probs=79.3
Q ss_pred ceEEEEeCCccccCHHHHHHHHHHHHcC-----CCCEEEEEcCCCCCCCCCCCChhhhhh--hcCCeEEeeccchh---h
Q 022329 105 SVVYVNYGSITVMTEQHLTEFAWGLANS-----KRPFLWILRPDVVMGDSVVLPDEYFEE--IKDRGFIVSWCNQE---Q 174 (299)
Q Consensus 105 ~vvyvs~GS~~~~~~~~~~~i~~al~~~-----~~~~lw~~~~~~~~~~~~~l~~~~~~~--~~~~~~v~~w~pq~---~ 174 (299)
.+++++++-.... .+.+..+++++... +.++++...++.. .-..+.+. ..+++++.+.+++. .
T Consensus 198 ~~vl~~~hr~~~~-~k~~~~ll~a~~~l~~~~~~~~~vi~~~~~~~------~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 270 (365)
T TIGR00236 198 RYILLTLHRRENV-GEPLENIFKAIREIVEEFEDVQIVYPVHLNPV------VREPLHKHLGDSKRVHLIEPLEYLDFLN 270 (365)
T ss_pred CEEEEecCchhhh-hhHHHHHHHHHHHHHHHCCCCEEEEECCCChH------HHHHHHHHhCCCCCEEEECCCChHHHHH
Confidence 4566654432211 24466677776543 4566665432210 00111121 23578887766654 4
Q ss_pred hhcCCCcCceeeccCchhhhhhhhcCcCeeeccCCcChHhHHHHHHHHhCcEEEecCCCCHHHHHHHHHHHhcCC
Q 022329 175 VLSHPSVGAFLTHCGWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVKRGDIEALVKEMMDGD 249 (299)
Q Consensus 175 iL~~~~v~~~ItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~i~~av~~vl~~~ 249 (299)
+++++++ +|+-.|.. +.||+++|+|+|.++-.++++. .+ ..|.+..+. .+.++|.+++.++++|+
T Consensus 271 ~l~~ad~--vv~~Sg~~-~~EA~a~g~PvI~~~~~~~~~e---~~--~~g~~~lv~--~d~~~i~~ai~~ll~~~ 335 (365)
T TIGR00236 271 LAANSHL--ILTDSGGV-QEEAPSLGKPVLVLRDTTERPE---TV--EAGTNKLVG--TDKENITKAAKRLLTDP 335 (365)
T ss_pred HHHhCCE--EEECChhH-HHHHHHcCCCEEECCCCCCChH---HH--hcCceEEeC--CCHHHHHHHHHHHHhCh
Confidence 6677777 89877644 7999999999999976665542 22 357776663 48999999999999876
No 63
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=97.69 E-value=0.0011 Score=54.51 Aligned_cols=82 Identities=12% Similarity=0.221 Sum_probs=62.0
Q ss_pred hcCCeEEeeccchh---hhhcCCCcCceeec----cCchhhhhhhhcCcCeeeccCCcChHhHHHHHHHHhCcEEEecCC
Q 022329 160 IKDRGFIVSWCNQE---QVLSHPSVGAFLTH----CGWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHD 232 (299)
Q Consensus 160 ~~~~~~v~~w~pq~---~iL~~~~v~~~ItH----gG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~ 232 (299)
...++.+.++.++. .++..+++ +|+. +...++.||+++|+|+|+.-. ..+...+ ...+.|..+..
T Consensus 71 ~~~~i~~~~~~~~~~l~~~~~~~di--~v~~s~~e~~~~~~~Ea~~~g~pvI~~~~----~~~~e~~-~~~~~g~~~~~- 142 (172)
T PF00534_consen 71 LKENIIFLGYVPDDELDELYKSSDI--FVSPSRNEGFGLSLLEAMACGCPVIASDI----GGNNEII-NDGVNGFLFDP- 142 (172)
T ss_dssp CGTTEEEEESHSHHHHHHHHHHTSE--EEE-BSSBSS-HHHHHHHHTT-EEEEESS----THHHHHS-GTTTSEEEEST-
T ss_pred cccccccccccccccccccccccee--ccccccccccccccccccccccceeeccc----cCCceee-ccccceEEeCC-
Confidence 35788899999833 37888887 7665 567799999999999998653 4455555 66677999974
Q ss_pred CCHHHHHHHHHHHhcCC
Q 022329 233 VKRGDIEALVKEMMDGD 249 (299)
Q Consensus 233 ~~~~~i~~av~~vl~~~ 249 (299)
.+.+++.++|.++++++
T Consensus 143 ~~~~~l~~~i~~~l~~~ 159 (172)
T PF00534_consen 143 NDIEELADAIEKLLNDP 159 (172)
T ss_dssp TSHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHCCH
Confidence 49999999999999865
No 64
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=97.69 E-value=0.0024 Score=59.15 Aligned_cols=99 Identities=16% Similarity=0.202 Sum_probs=69.4
Q ss_pred cCCeEEeeccchhh-hhcCCCcCceeecc--CchhhhhhhhcCcCeeeccCCcChHhHHHHHHHHhCcEEEecCCCCHHH
Q 022329 161 KDRGFIVSWCNQEQ-VLSHPSVGAFLTHC--GWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVKRGD 237 (299)
Q Consensus 161 ~~~~~v~~w~pq~~-iL~~~~v~~~ItHg--G~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~ 237 (299)
+.++.+.++.++.. ++..+++-++.++. ...+++||+++|+|+|+..... .....+ +.-..|..+. .-+.++
T Consensus 260 ~~~v~~~g~~~~~~~~~~~ad~~v~~S~~Eg~~~~~lEAma~G~PvI~~~~~~---g~~~~v-~~~~~G~lv~-~~d~~~ 334 (372)
T cd04949 260 EDYVFLKGYTRDLDEVYQKAQLSLLTSQSEGFGLSLMEALSHGLPVISYDVNY---GPSEII-EDGENGYLVP-KGDIEA 334 (372)
T ss_pred cceEEEcCCCCCHHHHHhhhhEEEecccccccChHHHHHHhCCCCEEEecCCC---CcHHHc-ccCCCceEeC-CCcHHH
Confidence 45677777766554 78888885555653 3568999999999999976431 123344 5556788776 468999
Q ss_pred HHHHHHHHhcCCh-hHHHHHHHHHHHHH
Q 022329 238 IEALVKEMMDGDE-GKKMRQKAWEWKKK 264 (299)
Q Consensus 238 i~~av~~vl~~~~-~~~~r~~a~~l~~~ 264 (299)
+.++|.+++++++ ..++.+++++.++.
T Consensus 335 la~~i~~ll~~~~~~~~~~~~a~~~~~~ 362 (372)
T cd04949 335 LAEAIIELLNDPKLLQKFSEAAYENAER 362 (372)
T ss_pred HHHHHHHHHcCHHHHHHHHHHHHHHHHH
Confidence 9999999998762 44566666665443
No 65
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=97.66 E-value=0.0015 Score=60.57 Aligned_cols=147 Identities=14% Similarity=0.147 Sum_probs=87.1
Q ss_pred ceEEEEeCCccccCHHHHHHHHHHHHcC--CCCEEEEEcCCCCCCCCCCCChhhhh--hhcCCeEEeeccch--hh---h
Q 022329 105 SVVYVNYGSITVMTEQHLTEFAWGLANS--KRPFLWILRPDVVMGDSVVLPDEYFE--EIKDRGFIVSWCNQ--EQ---V 175 (299)
Q Consensus 105 ~vvyvs~GS~~~~~~~~~~~i~~al~~~--~~~~lw~~~~~~~~~~~~~l~~~~~~--~~~~~~~v~~w~pq--~~---i 175 (299)
+.+++..|.......+.+..+++++... +.++++ ++... ....+ ....+ .+++++.+.+|.++ .. .
T Consensus 180 ~~~i~~~Grl~~~~~k~~~~l~~a~~~~~~~~~l~i-vG~g~---~~~~l-~~~~~~~~l~~~v~f~G~~~~~~~~~~~~ 254 (359)
T PRK09922 180 PAVFLYVGRLKFEGQKNVKELFDGLSQTTGEWQLHI-IGDGS---DFEKC-KAYSRELGIEQRIIWHGWQSQPWEVVQQK 254 (359)
T ss_pred CcEEEEEEEEecccCcCHHHHHHHHHhhCCCeEEEE-EeCCc---cHHHH-HHHHHHcCCCCeEEEecccCCcHHHHHHH
Confidence 3456777776432334466677777654 334433 33221 00011 11111 23568889998754 22 3
Q ss_pred hcCCCcCceee--c--cCchhhhhhhhcCcCeeecc-CCcChHhHHHHHHHHhCcEEEecCCCCHHHHHHHHHHHhcCCh
Q 022329 176 LSHPSVGAFLT--H--CGWNSTMESICGGVPVICWP-FFAEQQTNCRYACTTWGIGMEVNHDVKRGDIEALVKEMMDGDE 250 (299)
Q Consensus 176 L~~~~v~~~It--H--gG~~s~~Eal~~GvP~i~~P-~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~i~~av~~vl~~~~ 250 (299)
+..+++ +|. + |-..+++||+++|+|+|+.- ..+ ....+ +.-..|..+. .-+.+++.++|.++++|++
T Consensus 255 ~~~~d~--~v~~s~~Egf~~~~lEAma~G~Pvv~s~~~~g----~~eiv-~~~~~G~lv~-~~d~~~la~~i~~l~~~~~ 326 (359)
T PRK09922 255 IKNVSA--LLLTSKFEGFPMTLLEAMSYGIPCISSDCMSG----PRDII-KPGLNGELYT-PGNIDEFVGKLNKVISGEV 326 (359)
T ss_pred HhcCcE--EEECCcccCcChHHHHHHHcCCCEEEeCCCCC----hHHHc-cCCCceEEEC-CCCHHHHHHHHHHHHhCcc
Confidence 445566 553 3 33679999999999999986 332 12334 5556787775 4699999999999999874
Q ss_pred ---hHHHHHHHHHHHHH
Q 022329 251 ---GKKMRQKAWEWKKK 264 (299)
Q Consensus 251 ---~~~~r~~a~~l~~~ 264 (299)
...++++++++...
T Consensus 327 ~~~~~~~~~~~~~~~~~ 343 (359)
T PRK09922 327 KYQHDAIPNSIERFYEV 343 (359)
T ss_pred cCCHHHHHHHHHHhhHH
Confidence 23445555555544
No 66
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=97.62 E-value=0.0087 Score=53.45 Aligned_cols=93 Identities=19% Similarity=0.255 Sum_probs=61.2
Q ss_pred cCCeEEeeccch-hhhhcCCCcCceeecc----CchhhhhhhhcCcCeeeccCCcChHhHHHHHHHHhCcEEEecCCCCH
Q 022329 161 KDRGFIVSWCNQ-EQVLSHPSVGAFLTHC----GWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVKR 235 (299)
Q Consensus 161 ~~~~~v~~w~pq-~~iL~~~~v~~~ItHg----G~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~ 235 (299)
..++.+.++... ..++..+++ +|.-. ..++++||+++|+|+|+.+..+.+. .+......|..++ ..+.
T Consensus 234 ~~~v~~~g~~~~~~~~~~~ad~--~i~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~----~~~~~~~~g~~~~-~~~~ 306 (348)
T cd03820 234 EDRVILLGFTKNIEEYYAKASI--FVLTSRFEGFPMVLLEAMAFGLPVISFDCPTGPS----EIIEDGVNGLLVP-NGDV 306 (348)
T ss_pred CCeEEEcCCcchHHHHHHhCCE--EEeCccccccCHHHHHHHHcCCCEEEecCCCchH----hhhccCcceEEeC-CCCH
Confidence 356667776333 248888887 55443 2578999999999999987654332 2313323787776 4578
Q ss_pred HHHHHHHHHHhcCCh-hHHHHHHHHH
Q 022329 236 GDIEALVKEMMDGDE-GKKMRQKAWE 260 (299)
Q Consensus 236 ~~i~~av~~vl~~~~-~~~~r~~a~~ 260 (299)
+++.+++.++++|++ ...+.+++++
T Consensus 307 ~~~~~~i~~ll~~~~~~~~~~~~~~~ 332 (348)
T cd03820 307 EALAEALLRLMEDEELRKRMGANARE 332 (348)
T ss_pred HHHHHHHHHHHcCHHHHHHHHHHHHH
Confidence 999999999998763 2234444433
No 67
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=97.61 E-value=0.0045 Score=58.76 Aligned_cols=92 Identities=16% Similarity=0.155 Sum_probs=65.6
Q ss_pred cCCeEEeeccchhh---hhcCCCcCceee--c-------cCc-hhhhhhhhcCcCeeeccCCcChHhHHHHHHHHhCcEE
Q 022329 161 KDRGFIVSWCNQEQ---VLSHPSVGAFLT--H-------CGW-NSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGM 227 (299)
Q Consensus 161 ~~~~~v~~w~pq~~---iL~~~~v~~~It--H-------gG~-~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~ 227 (299)
.+++.+.+|+|+.+ ++..+++ ||. + =|. ++++||+++|+|+|+....+ ....+ +.-..|.
T Consensus 278 ~~~V~~~G~~~~~el~~~l~~aDv--~v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~t~~~g----~~E~v-~~~~~G~ 350 (406)
T PRK15427 278 EDVVEMPGFKPSHEVKAMLDDADV--FLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHSG----IPELV-EADKSGW 350 (406)
T ss_pred CCeEEEeCCCCHHHHHHHHHhCCE--EEECCccCCCCCccCccHHHHHHHhCCCCEEEeCCCC----chhhh-cCCCceE
Confidence 46788999999865 7778888 553 2 233 57899999999999986543 33344 5545787
Q ss_pred EecCCCCHHHHHHHHHHHhc-CCh-hHHHHHHHHH
Q 022329 228 EVNHDVKRGDIEALVKEMMD-GDE-GKKMRQKAWE 260 (299)
Q Consensus 228 ~l~~~~~~~~i~~av~~vl~-~~~-~~~~r~~a~~ 260 (299)
.+. .-+.+++.++|.++++ |++ .+++.+++++
T Consensus 351 lv~-~~d~~~la~ai~~l~~~d~~~~~~~~~~ar~ 384 (406)
T PRK15427 351 LVP-ENDAQALAQRLAAFSQLDTDELAPVVKRARE 384 (406)
T ss_pred EeC-CCCHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 776 4589999999999998 653 3345555544
No 68
>PRK14089 ipid-A-disaccharide synthase; Provisional
Probab=97.60 E-value=0.0027 Score=58.91 Aligned_cols=214 Identities=13% Similarity=0.056 Sum_probs=119.9
Q ss_pred hhccCccEEEEcCcccccHHHHHHHHhc---CCcEEEeCCccCc--chhhh------hhhhhcCC--CCCcc------cc
Q 022329 31 QNCFKSSAIIFNTFDEFEHEALEVIASK---FPNIYTVGPLPLL--CKQVV------EAKFRSFG--SSLWK------ED 91 (299)
Q Consensus 31 ~~~~~~~~~l~ns~~~le~~~~~~~r~~---~p~v~~VGpl~~~--~~~~~------~~~~~~~~--~~~~~------~~ 91 (299)
+...+.|.+++=.+|+|-.......+.. .|-++||.|-.+- +.... +.=+.-+| .++.. ..
T Consensus 72 ~~~~~pd~~i~iD~p~Fnl~lak~~k~~~~~i~viyyi~PqvWAWr~~R~~~i~k~~d~vl~ifPFE~~~yg~~~~~VGh 151 (347)
T PRK14089 72 ELAKQADKVLLMDSSSFNIPLAKKIKKAYPKKEIIYYILPQVWAWKKGRAKILEKYCDFLASILPFEVQFYQSKATYVGH 151 (347)
T ss_pred HHhcCCCEEEEeCCCCCCHHHHHHHHhcCCCCCEEEEECccceeeCcchHHHHHHHHhhhhccCCCCHHHhCCCCEEECC
Confidence 3346889999999999999888888876 5779999998753 11110 00001111 10000 00
Q ss_pred ---chhHHhhccCCCCceEEEEeCCccccCHHHHHHHHHHHHcC---CCCEEEEEcCCCCCCCCCCCChhhhhhhcC--C
Q 022329 92 ---TDCLKWLDKRDANSVVYVNYGSITVMTEQHLTEFAWGLANS---KRPFLWILRPDVVMGDSVVLPDEYFEEIKD--R 163 (299)
Q Consensus 92 ---~~~~~wl~~~~~~~vvyvs~GS~~~~~~~~~~~i~~al~~~---~~~~lw~~~~~~~~~~~~~l~~~~~~~~~~--~ 163 (299)
+.+...-...++.++|.+--||...--...+..+.++.... ...|++. .... . +.+.+.... .
T Consensus 152 Pl~d~~~~~~~~~~~~~~I~llPGSR~~Ei~~llP~~~~aa~~L~~~~~~~~i~-~a~~-------~-~~i~~~~~~~~~ 222 (347)
T PRK14089 152 PLLDEIKEFKKDLDKEGTIAFMPGSRKSEIKRLMPIFKELAKKLEGKEKILVVP-SFFK-------G-KDLKEIYGDISE 222 (347)
T ss_pred cHHHhhhhhhhhcCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHhhcCcEEEEe-CCCc-------H-HHHHHHHhcCCC
Confidence 01111101112346898999998432224444344444322 2223222 2110 0 222222211 2
Q ss_pred eEEeeccchhhhhcCCCcCceeeccCchhhhhhhhcCcCeeeccCC--cChHhHHHHHHH---HhCcEEEe------c--
Q 022329 164 GFIVSWCNQEQVLSHPSVGAFLTHCGWNSTMESICGGVPVICWPFF--AEQQTNCRYACT---TWGIGMEV------N-- 230 (299)
Q Consensus 164 ~~v~~w~pq~~iL~~~~v~~~ItHgG~~s~~Eal~~GvP~i~~P~~--~DQ~~na~~v~~---~~g~G~~l------~-- 230 (299)
+.+.+ .-..++..+++ +|+-.|..|+ |++.+|+|||+ ++- .-|+.||+++ . ..|+...+ +
T Consensus 223 ~~~~~--~~~~~m~~aDl--al~~SGT~TL-E~al~g~P~Vv-~Yk~~~lty~iak~l-v~~~~igL~Nii~~~~~~~~v 295 (347)
T PRK14089 223 FEISY--DTHKALLEAEF--AFICSGTATL-EAALIGTPFVL-AYKAKAIDYFIAKMF-VKLKHIGLANIFFDFLGKEPL 295 (347)
T ss_pred cEEec--cHHHHHHhhhH--HHhcCcHHHH-HHHHhCCCEEE-EEeCCHHHHHHHHHH-HcCCeeehHHHhcCCCccccc
Confidence 22232 33458888888 9999999999 99999999998 543 4678899998 6 44544444 1
Q ss_pred ------CCCCHHHHHHHHHHHhcCChhHHHHHHHHHHHHH
Q 022329 231 ------HDVKRGDIEALVKEMMDGDEGKKMRQKAWEWKKK 264 (299)
Q Consensus 231 ------~~~~~~~i~~av~~vl~~~~~~~~r~~a~~l~~~ 264 (299)
.++|++.|.+++.+ .. .+++++...++.+.
T Consensus 296 vPEllQ~~~t~~~la~~i~~-~~---~~~~~~~~~~l~~~ 331 (347)
T PRK14089 296 HPELLQEFVTVENLLKAYKE-MD---REKFFKKSKELREY 331 (347)
T ss_pred CchhhcccCCHHHHHHHHHH-HH---HHHHHHHHHHHHHH
Confidence 15899999998877 21 12455555555554
No 69
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=97.60 E-value=0.0033 Score=57.53 Aligned_cols=94 Identities=15% Similarity=0.137 Sum_probs=64.6
Q ss_pred hcCCeEEeeccc-hh---hhhcCCCcCceeec----cCchhhhhhhhcCcCeeeccCCcChHhHHHHHHHHhCcEEEecC
Q 022329 160 IKDRGFIVSWCN-QE---QVLSHPSVGAFLTH----CGWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNH 231 (299)
Q Consensus 160 ~~~~~~v~~w~p-q~---~iL~~~~v~~~ItH----gG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~ 231 (299)
...++.+.+|++ +. .+++.+++ +|.- |..++++||+++|+|+|+....+ ....+ ...+.|..+.
T Consensus 242 ~~~~v~~~g~~~~~~~~~~~~~~ad~--~l~ps~~e~~g~~~~Eam~~g~PvI~~~~~~----~~e~~-~~~~~g~~~~- 313 (365)
T cd03825 242 LPFPVHYLGSLNDDESLALIYSAADV--FVVPSLQENFPNTAIEALACGTPVVAFDVGG----IPDIV-DHGVTGYLAK- 313 (365)
T ss_pred CCCceEecCCcCCHHHHHHHHHhCCE--EEeccccccccHHHHHHHhcCCCEEEecCCC----Chhhe-eCCCceEEeC-
Confidence 356788889998 43 36878887 6664 33579999999999999876532 22233 4445677665
Q ss_pred CCCHHHHHHHHHHHhcCCh-hHHHHHHHHHH
Q 022329 232 DVKRGDIEALVKEMMDGDE-GKKMRQKAWEW 261 (299)
Q Consensus 232 ~~~~~~i~~av~~vl~~~~-~~~~r~~a~~l 261 (299)
..+.+++.+++.+++++++ ...+.+++++.
T Consensus 314 ~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~ 344 (365)
T cd03825 314 PGDPEDLAEGIEWLLADPDEREELGEAAREL 344 (365)
T ss_pred CCCHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 4578999999999998763 33444444443
No 70
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=97.60 E-value=0.00087 Score=61.70 Aligned_cols=92 Identities=13% Similarity=0.116 Sum_probs=66.9
Q ss_pred cCCeEEeeccchhh---hhcCCCcCceeec----------cCchhhhhhhhcCcCeeeccCCcChHhHHHHHHHHhCcEE
Q 022329 161 KDRGFIVSWCNQEQ---VLSHPSVGAFLTH----------CGWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGM 227 (299)
Q Consensus 161 ~~~~~v~~w~pq~~---iL~~~~v~~~ItH----------gG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~ 227 (299)
.+++.+.+++|+.. +++.+++ +|.- |-.+++.||+++|+|+|+-+..+ +...+ ...+.|.
T Consensus 244 ~~~v~~~g~~~~~~l~~~~~~ad~--~v~ps~~~~~~~~E~~~~~~~EA~a~G~PvI~s~~~~----~~e~i-~~~~~g~ 316 (367)
T cd05844 244 GGRVTFLGAQPHAEVRELMRRARI--FLQPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHGG----IPEAV-EDGETGL 316 (367)
T ss_pred CCeEEECCCCCHHHHHHHHHhCCE--EEECcccCCCCCccCCchHHHHHHHcCCCEEEeCCCC----chhhe-ecCCeeE
Confidence 56788889998754 6888888 5432 23578999999999999887643 55555 5667888
Q ss_pred EecCCCCHHHHHHHHHHHhcCCh-hHHHHHHHHH
Q 022329 228 EVNHDVKRGDIEALVKEMMDGDE-GKKMRQKAWE 260 (299)
Q Consensus 228 ~l~~~~~~~~i~~av~~vl~~~~-~~~~r~~a~~ 260 (299)
.+. .-+.+++.+++.++++|++ ..++.+++++
T Consensus 317 ~~~-~~d~~~l~~~i~~l~~~~~~~~~~~~~a~~ 349 (367)
T cd05844 317 LVP-EGDVAALAAALGRLLADPDLRARMGAAGRR 349 (367)
T ss_pred EEC-CCCHHHHHHHHHHHHcCHHHHHHHHHHHHH
Confidence 776 4588999999999998763 2334444444
No 71
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=97.59 E-value=0.0035 Score=58.20 Aligned_cols=93 Identities=13% Similarity=0.163 Sum_probs=67.3
Q ss_pred cCCeEEeeccchhh---hhcCCCcCceeec----cCchhhhhhhhcCcCeeeccCCcChHhHHHHHHHHhCcEEEecCCC
Q 022329 161 KDRGFIVSWCNQEQ---VLSHPSVGAFLTH----CGWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDV 233 (299)
Q Consensus 161 ~~~~~v~~w~pq~~---iL~~~~v~~~ItH----gG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~ 233 (299)
..++.+.+|+|+.+ ++..+++ ++.. +-..+++||+++|+|+|+.+..+ ....+ ++.+.|..++ .-
T Consensus 282 ~~~v~~~g~~~~~~~~~~~~~adi--~l~ps~~e~~~~~l~Ea~a~G~Pvi~s~~~~----~~e~i-~~~~~g~~~~-~~ 353 (398)
T cd03800 282 IDRVDFPGRVSREDLPALYRAADV--FVNPALYEPFGLTALEAMACGLPVVATAVGG----PRDIV-VDGVTGLLVD-PR 353 (398)
T ss_pred CceEEEeccCCHHHHHHHHHhCCE--EEecccccccCcHHHHHHhcCCCEEECCCCC----HHHHc-cCCCCeEEeC-CC
Confidence 36788999999876 5878887 6643 22468999999999999877543 44455 6667888886 35
Q ss_pred CHHHHHHHHHHHhcCCh-hHHHHHHHHHH
Q 022329 234 KRGDIEALVKEMMDGDE-GKKMRQKAWEW 261 (299)
Q Consensus 234 ~~~~i~~av~~vl~~~~-~~~~r~~a~~l 261 (299)
+.+++.++|.+++++++ .+.+.+++++.
T Consensus 354 ~~~~l~~~i~~l~~~~~~~~~~~~~a~~~ 382 (398)
T cd03800 354 DPEALAAALRRLLTDPALRRRLSRAGLRR 382 (398)
T ss_pred CHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 79999999999998752 23444554443
No 72
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=97.53 E-value=0.0023 Score=57.98 Aligned_cols=93 Identities=16% Similarity=0.137 Sum_probs=64.2
Q ss_pred cCCeEEeeccchhh---hhcCCCcCceeec--cCchhhhhhhhcCcCeeeccCCcChHhHHHHHHHHhCcEEEecCCCCH
Q 022329 161 KDRGFIVSWCNQEQ---VLSHPSVGAFLTH--CGWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVKR 235 (299)
Q Consensus 161 ~~~~~v~~w~pq~~---iL~~~~v~~~ItH--gG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~ 235 (299)
.+++.+.+|+++.. ++..+++-++-++ |-.++++||+++|+|+|+.+.. .....+ .. +.|..... +.
T Consensus 261 ~~~v~~~g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~PvI~~~~~----~~~~~~-~~-~~~~~~~~--~~ 332 (375)
T cd03821 261 EDRVTFTGMLYGEDKAAALADADLFVLPSHSENFGIVVAEALACGTPVVTTDKV----PWQELI-EY-GCGWVVDD--DV 332 (375)
T ss_pred cceEEEcCCCChHHHHHHHhhCCEEEeccccCCCCcHHHHHHhcCCCEEEcCCC----CHHHHh-hc-CceEEeCC--Ch
Confidence 46788999999654 6778887333232 2256899999999999997653 234444 44 78877753 55
Q ss_pred HHHHHHHHHHhcCCh-hHHHHHHHHHH
Q 022329 236 GDIEALVKEMMDGDE-GKKMRQKAWEW 261 (299)
Q Consensus 236 ~~i~~av~~vl~~~~-~~~~r~~a~~l 261 (299)
+++.+++.+++++++ .+++.+++++.
T Consensus 333 ~~~~~~i~~l~~~~~~~~~~~~~~~~~ 359 (375)
T cd03821 333 DALAAALRRALELPQRLKAMGENGRAL 359 (375)
T ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 999999999998752 23455555544
No 73
>KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=97.41 E-value=0.0042 Score=60.55 Aligned_cols=137 Identities=19% Similarity=0.288 Sum_probs=91.3
Q ss_pred CCceEEEEeCCccccCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCCCCChhhhhh------hcCCeEEeeccchhh--
Q 022329 103 ANSVVYVNYGSITVMTEQHLTEFAWGLANSKRPFLWILRPDVVMGDSVVLPDEYFEE------IKDRGFIVSWCNQEQ-- 174 (299)
Q Consensus 103 ~~~vvyvs~GS~~~~~~~~~~~i~~al~~~~~~~lw~~~~~~~~~~~~~l~~~~~~~------~~~~~~v~~w~pq~~-- 174 (299)
+..+||.+|--...++++.++.-+.-|++.+..++|..+.+..-+ ..|..- -++++.+.+-++..+
T Consensus 757 ~d~vvf~~FNqLyKidP~~l~~W~~ILk~VPnS~LwllrfPa~ge------~rf~ty~~~~Gl~p~riifs~va~k~eHv 830 (966)
T KOG4626|consen 757 EDAVVFCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAVGE------QRFRTYAEQLGLEPDRIIFSPVAAKEEHV 830 (966)
T ss_pred CCeEEEeechhhhcCCHHHHHHHHHHHHhCCcceeEEEeccccch------HHHHHHHHHhCCCccceeeccccchHHHH
Confidence 557999999999889999999999999999999999998653211 111111 146666666555433
Q ss_pred ---hhcCCCcCceeeccCchhhhhhhhcCcCeeeccCCcChHhHHHHHHHHhCcEEEecCCCCHHHHHHHHHHHhcC
Q 022329 175 ---VLSHPSVGAFLTHCGWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVKRGDIEALVKEMMDG 248 (299)
Q Consensus 175 ---iL~~~~v~~~ItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~i~~av~~vl~~ 248 (299)
.|..-.+.-+.+. |+.|.++.+++|||||.+|.-.---.-|.......|+|..+.+ ++++-.+.--++-.|
T Consensus 831 rr~~LaDv~LDTplcn-GhTTg~dvLw~GvPmVTmpge~lAsrVa~Sll~~~Gl~hliak--~~eEY~~iaV~Latd 904 (966)
T KOG4626|consen 831 RRGQLADVCLDTPLCN-GHTTGMDVLWAGVPMVTMPGETLASRVAASLLTALGLGHLIAK--NREEYVQIAVRLATD 904 (966)
T ss_pred HhhhhhhhcccCcCcC-CcccchhhhccCCceeecccHHHHHHHHHHHHHHcccHHHHhh--hHHHHHHHHHHhhcC
Confidence 3433333335654 6889999999999999999854333334333377888886653 555554444444444
No 74
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=97.37 E-value=0.01 Score=54.66 Aligned_cols=144 Identities=12% Similarity=0.088 Sum_probs=84.4
Q ss_pred ceEEEEeCCccccCHHHHHHHHHHHH----cCCCCEEEEEcCCCCCCCCCCCChhhhhh--hcCCeEEeeccchh-hhhc
Q 022329 105 SVVYVNYGSITVMTEQHLTEFAWGLA----NSKRPFLWILRPDVVMGDSVVLPDEYFEE--IKDRGFIVSWCNQE-QVLS 177 (299)
Q Consensus 105 ~vvyvs~GS~~~~~~~~~~~i~~al~----~~~~~~lw~~~~~~~~~~~~~l~~~~~~~--~~~~~~v~~w~pq~-~iL~ 177 (299)
..+++.+|.... .+.+..+++++. +.+.++++.-.+.. ...+ ...... ..+++.+.++.++. .++.
T Consensus 197 ~~~il~~g~l~~--~K~~~~li~a~~~l~~~~~~~l~i~G~g~~----~~~~-~~~~~~~~~~~~v~~~g~~~~~~~~~~ 269 (371)
T cd04962 197 EKVLIHISNFRP--VKRIDDVIRIFAKVRKEVPARLLLVGDGPE----RSPA-ERLARELGLQDDVLFLGKQDHVEELLS 269 (371)
T ss_pred CeEEEEeccccc--ccCHHHHHHHHHHHHhcCCceEEEEcCCcC----HHHH-HHHHHHcCCCceEEEecCcccHHHHHH
Confidence 456667777642 233344444443 23556655533221 0001 111111 23567788877654 4788
Q ss_pred CCCcCceee--ccCchhhhhhhhcCcCeeeccCCcChHhHHHHHHHHhCcEEEecCCCCHHHHHHHHHHHhcCCh-hHHH
Q 022329 178 HPSVGAFLT--HCGWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVKRGDIEALVKEMMDGDE-GKKM 254 (299)
Q Consensus 178 ~~~v~~~It--HgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~i~~av~~vl~~~~-~~~~ 254 (299)
.+++-++-+ -|...++.||+++|+|+|+.... ..+..+ ++-..|..++ .-+.+++.+++.+++++++ .+++
T Consensus 270 ~~d~~v~ps~~E~~~~~~~EAma~g~PvI~s~~~----~~~e~i-~~~~~G~~~~-~~~~~~l~~~i~~l~~~~~~~~~~ 343 (371)
T cd04962 270 IADLFLLPSEKESFGLAALEAMACGVPVVASNAG----GIPEVV-KHGETGFLVD-VGDVEAMAEYALSLLEDDELWQEF 343 (371)
T ss_pred hcCEEEeCCCcCCCccHHHHHHHcCCCEEEeCCC----Cchhhh-cCCCceEEcC-CCCHHHHHHHHHHHHhCHHHHHHH
Confidence 888722222 23456999999999999996553 344555 5546777665 3578999999999998753 3455
Q ss_pred HHHHHHH
Q 022329 255 RQKAWEW 261 (299)
Q Consensus 255 r~~a~~l 261 (299)
++++++.
T Consensus 344 ~~~~~~~ 350 (371)
T cd04962 344 SRAARNR 350 (371)
T ss_pred HHHHHHH
Confidence 6666554
No 75
>PRK10307 putative glycosyl transferase; Provisional
Probab=97.35 E-value=0.016 Score=54.66 Aligned_cols=142 Identities=13% Similarity=0.059 Sum_probs=86.3
Q ss_pred ceEEEEeCCccccCHHHHHHHHHHHHcC----CCCEEEEEcCCCCCCCCCCCChhhhhh---h-cCCeEEeeccchhh--
Q 022329 105 SVVYVNYGSITVMTEQHLTEFAWGLANS----KRPFLWILRPDVVMGDSVVLPDEYFEE---I-KDRGFIVSWCNQEQ-- 174 (299)
Q Consensus 105 ~vvyvs~GS~~~~~~~~~~~i~~al~~~----~~~~lw~~~~~~~~~~~~~l~~~~~~~---~-~~~~~v~~w~pq~~-- 174 (299)
..+++..|+.. +.+.+..+++++... +.+++ .++... ..+.+.+. . .+|+.+.+|+|+..
T Consensus 229 ~~~i~~~G~l~--~~kg~~~li~a~~~l~~~~~~~l~-ivG~g~-------~~~~l~~~~~~~~l~~v~f~G~~~~~~~~ 298 (412)
T PRK10307 229 KKIVLYSGNIG--EKQGLELVIDAARRLRDRPDLIFV-ICGQGG-------GKARLEKMAQCRGLPNVHFLPLQPYDRLP 298 (412)
T ss_pred CEEEEEcCccc--cccCHHHHHHHHHHhccCCCeEEE-EECCCh-------hHHHHHHHHHHcCCCceEEeCCCCHHHHH
Confidence 35556678774 333455555665532 23443 344221 11222211 1 24788899998764
Q ss_pred -hhcCCCcCceeeccCc------hhhhhhhhcCcCeeeccCCcChHhHHHHHHHHhCcEEEecCCCCHHHHHHHHHHHhc
Q 022329 175 -VLSHPSVGAFLTHCGW------NSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVKRGDIEALVKEMMD 247 (299)
Q Consensus 175 -iL~~~~v~~~ItHgG~------~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~i~~av~~vl~ 247 (299)
+++.+++.++.+.-+. +.+.|++++|+|+|+....+.. ....+ + +.|+.+. .-+.+++.++|.++++
T Consensus 299 ~~~~~aDi~v~ps~~e~~~~~~p~kl~eama~G~PVi~s~~~g~~--~~~~i-~--~~G~~~~-~~d~~~la~~i~~l~~ 372 (412)
T PRK10307 299 ALLKMADCHLLPQKAGAADLVLPSKLTNMLASGRNVVATAEPGTE--LGQLV-E--GIGVCVE-PESVEALVAAIAALAR 372 (412)
T ss_pred HHHHhcCEeEEeeccCcccccCcHHHHHHHHcCCCEEEEeCCCch--HHHHH-h--CCcEEeC-CCCHHHHHHHHHHHHh
Confidence 7888888655555442 2468999999999998764321 12233 3 7788776 3588999999999998
Q ss_pred CCh-hHHHHHHHHHHH
Q 022329 248 GDE-GKKMRQKAWEWK 262 (299)
Q Consensus 248 ~~~-~~~~r~~a~~l~ 262 (299)
|++ ...+++++++..
T Consensus 373 ~~~~~~~~~~~a~~~~ 388 (412)
T PRK10307 373 QALLRPKLGTVAREYA 388 (412)
T ss_pred CHHHHHHHHHHHHHHH
Confidence 752 345666666544
No 76
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=97.33 E-value=0.022 Score=53.25 Aligned_cols=183 Identities=14% Similarity=0.050 Sum_probs=96.1
Q ss_pred HhhccCccEEEEcCcccccHHHHHHHHhcCCcEEEeCCccCcchhhhhhhhhcCCCCCccccchhHHhhccCCCCceEEE
Q 022329 30 AQNCFKSSAIIFNTFDEFEHEALEVIASKFPNIYTVGPLPLLCKQVVEAKFRSFGSSLWKEDTDCLKWLDKRDANSVVYV 109 (299)
Q Consensus 30 ~~~~~~~~~~l~ns~~~le~~~~~~~r~~~p~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~vvyv 109 (299)
...++.+|.+++.| ....+..+...++++.|.--.....-. +.+. ....... +... ...+.+
T Consensus 148 ~~~~~~ad~vi~~S-----~~l~~~~~~~~~~i~~i~ngvd~~~f~------~~~~----~~~~~~~-~~~~--~~~~i~ 209 (373)
T cd04950 148 RRLLKRADLVFTTS-----PSLYEAKRRLNPNVVLVPNGVDYEHFA------AARD----PPPPPAD-LAAL--PRPVIG 209 (373)
T ss_pred HHHHHhCCEEEECC-----HHHHHHHhhCCCCEEEcccccCHHHhh------cccc----cCCChhH-HhcC--CCCEEE
Confidence 34457899999888 444445555546677665332211100 0000 0000011 1111 223555
Q ss_pred EeCCccc-cCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCCCCChhhhhhhcCCeEEeeccchhh---hhcCCCcCcee
Q 022329 110 NYGSITV-MTEQHLTEFAWGLANSKRPFLWILRPDVVMGDSVVLPDEYFEEIKDRGFIVSWCNQEQ---VLSHPSVGAFL 185 (299)
Q Consensus 110 s~GS~~~-~~~~~~~~i~~al~~~~~~~lw~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~w~pq~~---iL~~~~v~~~I 185 (299)
.+|++.. ...+.+..++.. ..+..|+++-..... .. ...+ ....|+.+.+++|+.+ .+++.++.++-
T Consensus 210 y~G~l~~~~d~~ll~~la~~--~p~~~~vliG~~~~~----~~-~~~~--~~~~nV~~~G~~~~~~l~~~l~~~Dv~l~P 280 (373)
T cd04950 210 YYGAIAEWLDLELLEALAKA--RPDWSFVLIGPVDVS----ID-PSAL--LRLPNVHYLGPKPYKELPAYLAGFDVAILP 280 (373)
T ss_pred EEeccccccCHHHHHHHHHH--CCCCEEEEECCCcCc----cC-hhHh--ccCCCEEEeCCCCHHHHHHHHHhCCEEecC
Confidence 6788853 333444443332 234555544322000 00 0111 1137899999998665 68888884432
Q ss_pred ------eccC-chhhhhhhhcCcCeeeccCCcChHhHHHHHHHHhCcEEEecCCCCHHHHHHHHHHHhcCC
Q 022329 186 ------THCG-WNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVKRGDIEALVKEMMDGD 249 (299)
Q Consensus 186 ------tHgG-~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~i~~av~~vl~~~ 249 (299)
+.++ -+.++|++++|+|+|+.++ ...+ +..+.+.... -+.+++.++|.+++.++
T Consensus 281 ~~~~~~~~~~~P~Kl~EylA~G~PVVat~~-------~~~~-~~~~~~~~~~--~d~~~~~~ai~~~l~~~ 341 (373)
T cd04950 281 FRLNELTRATSPLKLFEYLAAGKPVVATPL-------PEVR-RYEDEVVLIA--DDPEEFVAAIEKALLED 341 (373)
T ss_pred CccchhhhcCCcchHHHHhccCCCEEecCc-------HHHH-hhcCcEEEeC--CCHHHHHHHHHHHHhcC
Confidence 2233 2458999999999998764 1222 3333333333 38999999999987644
No 77
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=97.31 E-value=0.0063 Score=56.47 Aligned_cols=91 Identities=11% Similarity=0.083 Sum_probs=61.3
Q ss_pred CCeEEeeccchh-hhhcCCCcCcee--ec--cCchhhhhhhhcCcCeeeccCCcChHhHHHHHHHHhCcEEEecCCCCHH
Q 022329 162 DRGFIVSWCNQE-QVLSHPSVGAFL--TH--CGWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVKRG 236 (299)
Q Consensus 162 ~~~~v~~w~pq~-~iL~~~~v~~~I--tH--gG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~ 236 (299)
.++.+.++..+. .++..+++ +| ++ |-.++++||+++|+|+|+....+ +...+ +.-..|..+. .-+.+
T Consensus 255 ~~v~~~g~~~~~~~~~~~adi--~v~pS~~Eg~~~~~lEAma~G~Pvv~s~~~g----~~e~i-~~~~~g~~~~-~~d~~ 326 (374)
T TIGR03088 255 HLVWLPGERDDVPALMQALDL--FVLPSLAEGISNTILEAMASGLPVIATAVGG----NPELV-QHGVTGALVP-PGDAV 326 (374)
T ss_pred ceEEEcCCcCCHHHHHHhcCE--EEeccccccCchHHHHHHHcCCCEEEcCCCC----cHHHh-cCCCceEEeC-CCCHH
Confidence 455665554433 47888888 55 33 44669999999999999977643 44444 5545677775 35889
Q ss_pred HHHHHHHHHhcCCh-hHHHHHHHHH
Q 022329 237 DIEALVKEMMDGDE-GKKMRQKAWE 260 (299)
Q Consensus 237 ~i~~av~~vl~~~~-~~~~r~~a~~ 260 (299)
++.+++.+++++++ ...+.+++++
T Consensus 327 ~la~~i~~l~~~~~~~~~~~~~a~~ 351 (374)
T TIGR03088 327 ALARALQPYVSDPAARRAHGAAGRA 351 (374)
T ss_pred HHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 99999999998752 2234444443
No 78
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=97.30 E-value=0.0084 Score=54.04 Aligned_cols=79 Identities=15% Similarity=0.230 Sum_probs=54.9
Q ss_pred cCCeEEeeccchh-hhhcCCCcCceeeccC----chhhhhhhhcCcCeeeccCCcChHhHHHHHHHHhCcEEEecCCCCH
Q 022329 161 KDRGFIVSWCNQE-QVLSHPSVGAFLTHCG----WNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVKR 235 (299)
Q Consensus 161 ~~~~~v~~w~pq~-~iL~~~~v~~~ItHgG----~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~ 235 (299)
..++.+.+...+. .+++.+++ +|.... .+++.||+++|+|+|+... ..+...+ .+ .|..+. .-+.
T Consensus 250 ~~~v~~~g~~~~~~~~~~~adi--~v~ps~~e~~~~~~~Ea~a~g~PvI~~~~----~~~~e~~-~~--~g~~~~-~~~~ 319 (365)
T cd03807 250 EDKVILLGERSDVPALLNALDV--FVLSSLSEGFPNVLLEAMACGLPVVATDV----GDNAELV-GD--TGFLVP-PGDP 319 (365)
T ss_pred CceEEEccccccHHHHHHhCCE--EEeCCccccCCcHHHHHHhcCCCEEEcCC----CChHHHh-hc--CCEEeC-CCCH
Confidence 3456665544433 48888887 665443 4799999999999998654 3345555 44 555554 3478
Q ss_pred HHHHHHHHHHhcCC
Q 022329 236 GDIEALVKEMMDGD 249 (299)
Q Consensus 236 ~~i~~av~~vl~~~ 249 (299)
+++.+++.++++++
T Consensus 320 ~~l~~~i~~l~~~~ 333 (365)
T cd03807 320 EALAEAIEALLADP 333 (365)
T ss_pred HHHHHHHHHHHhCh
Confidence 99999999999875
No 79
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=97.30 E-value=0.025 Score=51.37 Aligned_cols=82 Identities=13% Similarity=0.177 Sum_probs=56.1
Q ss_pred hcCCeEEeeccchhh---hhcCCCcCceeec--cCchhhhhhhhcCcCeeeccCCcChHhHHHHHHHHhCcEEEecCCCC
Q 022329 160 IKDRGFIVSWCNQEQ---VLSHPSVGAFLTH--CGWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVK 234 (299)
Q Consensus 160 ~~~~~~v~~w~pq~~---iL~~~~v~~~ItH--gG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~ 234 (299)
...++.+.+|+|+.. ++..+++-++-+. +..++++||+++|+|+|+....+ ....+ .+ .|..+. .-+
T Consensus 251 ~~~~v~~~g~~~~~~~~~~~~~~d~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~----~~e~~-~~--~~~~~~-~~~ 322 (365)
T cd03809 251 LGDRVRFLGYVSDEELAALYRGARAFVFPSLYEGFGLPVLEAMACGTPVIASNISS----LPEVA-GD--AALYFD-PLD 322 (365)
T ss_pred CCCeEEECCCCChhHHHHHHhhhhhhcccchhccCCCCHHHHhcCCCcEEecCCCC----cccee-cC--ceeeeC-CCC
Confidence 357888999998764 6777887333222 33568999999999999965521 12222 22 344444 348
Q ss_pred HHHHHHHHHHHhcCC
Q 022329 235 RGDIEALVKEMMDGD 249 (299)
Q Consensus 235 ~~~i~~av~~vl~~~ 249 (299)
.+++.+++.++++|+
T Consensus 323 ~~~~~~~i~~l~~~~ 337 (365)
T cd03809 323 PEALAAAIERLLEDP 337 (365)
T ss_pred HHHHHHHHHHHhcCH
Confidence 999999999999876
No 80
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=97.30 E-value=0.0085 Score=56.29 Aligned_cols=93 Identities=18% Similarity=0.103 Sum_probs=65.5
Q ss_pred cCCeEEeeccchhh---hhcCCCcCceee---c-cCchhhhhhhhcCcCeeeccCCcChHhHHHHHHHHhCcEEEecCCC
Q 022329 161 KDRGFIVSWCNQEQ---VLSHPSVGAFLT---H-CGWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDV 233 (299)
Q Consensus 161 ~~~~~v~~w~pq~~---iL~~~~v~~~It---H-gG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~ 233 (299)
.+++.+.+++|... +++.+++ ||. + |...+++||+++|+|+|+....+ ....+ ++.+.|..+. .-
T Consensus 282 ~~~v~~~g~~~~~~~~~~l~~ad~--~v~ps~~E~~g~~~lEAma~G~Pvi~~~~~~----~~e~i-~~~~~g~~~~-~~ 353 (405)
T TIGR03449 282 ADRVRFLPPRPPEELVHVYRAADV--VAVPSYNESFGLVAMEAQACGTPVVAARVGG----LPVAV-ADGETGLLVD-GH 353 (405)
T ss_pred CceEEECCCCCHHHHHHHHHhCCE--EEECCCCCCcChHHHHHHHcCCCEEEecCCC----cHhhh-ccCCceEECC-CC
Confidence 36788999998654 7888887 552 2 33458999999999999976543 33344 5556787775 35
Q ss_pred CHHHHHHHHHHHhcCCh-hHHHHHHHHHH
Q 022329 234 KRGDIEALVKEMMDGDE-GKKMRQKAWEW 261 (299)
Q Consensus 234 ~~~~i~~av~~vl~~~~-~~~~r~~a~~l 261 (299)
+.+++.+++.+++++++ ..++++++++.
T Consensus 354 d~~~la~~i~~~l~~~~~~~~~~~~~~~~ 382 (405)
T TIGR03449 354 DPADWADALARLLDDPRTRIRMGAAAVEH 382 (405)
T ss_pred CHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 88999999999998753 23455555543
No 81
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A.
Probab=97.29 E-value=0.0013 Score=51.76 Aligned_cols=80 Identities=15% Similarity=0.181 Sum_probs=50.4
Q ss_pred cCCeEEeeccchhh-hhcCCCcCceeec---cCchhhhhhhhcCcCeeeccCCcChHhHHHHHHHHhCcEEEecCCCCHH
Q 022329 161 KDRGFIVSWCNQEQ-VLSHPSVGAFLTH---CGWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVKRG 236 (299)
Q Consensus 161 ~~~~~v~~w~pq~~-iL~~~~v~~~ItH---gG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~ 236 (299)
..|+.+.+|++... +++.+++.+..+. +-.+++.|++++|+|+|+.+.. ..... +..+.|..+ .-+.+
T Consensus 52 ~~~v~~~g~~~e~~~~l~~~dv~l~p~~~~~~~~~k~~e~~~~G~pvi~~~~~-----~~~~~-~~~~~~~~~--~~~~~ 123 (135)
T PF13692_consen 52 RPNVRFHGFVEELPEILAAADVGLIPSRFNEGFPNKLLEAMAAGKPVIASDNG-----AEGIV-EEDGCGVLV--ANDPE 123 (135)
T ss_dssp HCTEEEE-S-HHHHHHHHC-SEEEE-BSS-SCC-HHHHHHHCTT--EEEEHHH-----CHCHS----SEEEE---TT-HH
T ss_pred CCCEEEcCCHHHHHHHHHhCCEEEEEeeCCCcCcHHHHHHHHhCCCEEECCcc-----hhhhe-eecCCeEEE--CCCHH
Confidence 46899999986443 8888988666553 2248999999999999998771 22223 446788777 34999
Q ss_pred HHHHHHHHHhcC
Q 022329 237 DIEALVKEMMDG 248 (299)
Q Consensus 237 ~i~~av~~vl~~ 248 (299)
++.+++.++++|
T Consensus 124 ~l~~~i~~l~~d 135 (135)
T PF13692_consen 124 ELAEAIERLLND 135 (135)
T ss_dssp HHHHHHHHHHH-
T ss_pred HHHHHHHHHhcC
Confidence 999999999865
No 82
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional
Probab=97.26 E-value=0.0024 Score=58.89 Aligned_cols=109 Identities=16% Similarity=0.286 Sum_probs=77.0
Q ss_pred cCCeEEeeccchhhh---hcCCCcCceeec-------cCc------hhhhhhhhcCcCeeeccCCcChHhHHHHHHHHhC
Q 022329 161 KDRGFIVSWCNQEQV---LSHPSVGAFLTH-------CGW------NSTMESICGGVPVICWPFFAEQQTNCRYACTTWG 224 (299)
Q Consensus 161 ~~~~~v~~w~pq~~i---L~~~~v~~~ItH-------gG~------~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g 224 (299)
.+|+.+.+|+|+.++ |+. +.+++... +.+ +-+.+.+++|+|+|+++. ...+..+ ++.+
T Consensus 206 ~~~V~f~G~~~~eel~~~l~~-~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G~PVI~~~~----~~~~~~V-~~~~ 279 (333)
T PRK09814 206 SANISYKGWFDPEELPNELSK-GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAGLPVIVWSK----AAIADFI-VENG 279 (333)
T ss_pred CCCeEEecCCCHHHHHHHHhc-CcCeEEcCCCCCccchhhhhccchHHHHHHHHCCCCEEECCC----ccHHHHH-HhCC
Confidence 578999999998874 443 43333221 111 226778999999999754 4566777 8889
Q ss_pred cEEEecCCCCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHH
Q 022329 225 IGMEVNHDVKRGDIEALVKEMMDGDEGKKMRQKAWEWKKKAEAATAVGGQSYNNFDRLV 283 (299)
Q Consensus 225 ~G~~l~~~~~~~~i~~av~~vl~~~~~~~~r~~a~~l~~~~~~~~~~gg~s~~~l~~li 283 (299)
+|+.++ +.+++.+++.++ +++++.+|++|+++++++++ .|.--...+.+++
T Consensus 280 ~G~~v~---~~~el~~~l~~~-~~~~~~~m~~n~~~~~~~~~----~g~~~~~~~~~~~ 330 (333)
T PRK09814 280 LGFVVD---SLEELPEIIDNI-TEEEYQEMVENVKKISKLLR----NGYFTKKALVDAI 330 (333)
T ss_pred ceEEeC---CHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHh----cchhHHHHHHHHH
Confidence 999997 678899999885 44567789999999999975 3444444444444
No 83
>COG5017 Uncharacterized conserved protein [Function unknown]
Probab=97.24 E-value=0.003 Score=49.98 Aligned_cols=107 Identities=10% Similarity=0.059 Sum_probs=64.6
Q ss_pred EEEEeCCccccCHHHHHH--HHHHHHcCCCCEEEEEcCCCCCCCCCCCChhhhhhhcCCe-EEeec--cchh-hhhcCCC
Q 022329 107 VYVNYGSITVMTEQHLTE--FAWGLANSKRPFLWILRPDVVMGDSVVLPDEYFEEIKDRG-FIVSW--CNQE-QVLSHPS 180 (299)
Q Consensus 107 vyvs~GS~~~~~~~~~~~--i~~al~~~~~~~lw~~~~~~~~~~~~~l~~~~~~~~~~~~-~v~~w--~pq~-~iL~~~~ 180 (299)
|||+-||....-...+.. +..-.+....++|.-+++.. .. |-|+ .+.+| .+-. .+.+.++
T Consensus 2 ifVTvGstf~~f~rlv~k~e~~el~~~i~e~lIvQyGn~d------~k--------pvagl~v~~F~~~~kiQsli~dar 67 (161)
T COG5017 2 IFVTVGSTFYPFNRLVLKIEVLELTELIQEELIVQYGNGD------IK--------PVAGLRVYGFDKEEKIQSLIHDAR 67 (161)
T ss_pred eEEEecCccchHHHHHhhHHHHHHHHHhhhheeeeecCCC------cc--------cccccEEEeechHHHHHHHhhcce
Confidence 688999983211111111 22222233457788887541 11 1122 34433 4433 3666666
Q ss_pred cCceeeccCchhhhhhhhcCcCeeeccCCc--------ChHhHHHHHHHHhCcEEEec
Q 022329 181 VGAFLTHCGWNSTMESICGGVPVICWPFFA--------EQQTNCRYACTTWGIGMEVN 230 (299)
Q Consensus 181 v~~~ItHgG~~s~~Eal~~GvP~i~~P~~~--------DQ~~na~~v~~~~g~G~~l~ 230 (299)
+ +|+|||.||++.++..++|.|++|-.. .|-.-|..+ .+.+.=....
T Consensus 68 I--VISHaG~GSIL~~~rl~kplIv~pr~s~y~elvDdHQvela~kl-ae~~~vv~~s 122 (161)
T COG5017 68 I--VISHAGEGSILLLLRLDKPLIVVPRSSQYQELVDDHQVELALKL-AEINYVVACS 122 (161)
T ss_pred E--EEeccCcchHHHHhhcCCcEEEEECchhHHHhhhhHHHHHHHHH-HhcCceEEEc
Confidence 5 999999999999999999999999632 455667777 5556555554
No 84
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=97.23 E-value=0.0096 Score=56.60 Aligned_cols=91 Identities=13% Similarity=0.180 Sum_probs=64.3
Q ss_pred CCeEE-eeccchhh---hhcCCCcCceee-c------cCchhhhhhhhcCcCeeeccCCcChHhHHHHHHHHhCcEEEec
Q 022329 162 DRGFI-VSWCNQEQ---VLSHPSVGAFLT-H------CGWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVN 230 (299)
Q Consensus 162 ~~~~v-~~w~pq~~---iL~~~~v~~~It-H------gG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~ 230 (299)
+++.+ .+|+|..+ +|+.+++ ++. + |--+.++||+++|+|+|+.... .....+ ++-+.|..+.
T Consensus 294 ~~~~~~~g~~~~~~~~~~l~~aDv--~v~~~~~~~~~~~p~~~~Eama~G~PVI~s~~~----~~~eiv-~~~~~G~lv~ 366 (415)
T cd03816 294 KKVTIRTPWLSAEDYPKLLASADL--GVSLHTSSSGLDLPMKVVDMFGCGLPVCALDFK----CIDELV-KHGENGLVFG 366 (415)
T ss_pred CcEEEEcCcCCHHHHHHHHHhCCE--EEEccccccccCCcHHHHHHHHcCCCEEEeCCC----CHHHHh-cCCCCEEEEC
Confidence 34554 46887665 6888888 653 1 1244799999999999996542 344555 6767898884
Q ss_pred CCCCHHHHHHHHHHHhcC---C-hhHHHHHHHHHHH
Q 022329 231 HDVKRGDIEALVKEMMDG---D-EGKKMRQKAWEWK 262 (299)
Q Consensus 231 ~~~~~~~i~~av~~vl~~---~-~~~~~r~~a~~l~ 262 (299)
+.+++.+++.++++| + +.+.+.+++++.+
T Consensus 367 ---d~~~la~~i~~ll~~~~~~~~~~~m~~~~~~~~ 399 (415)
T cd03816 367 ---DSEELAEQLIDLLSNFPNRGKLNSLKKGAQEES 399 (415)
T ss_pred ---CHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhh
Confidence 799999999999998 3 3456666666655
No 85
>COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=97.18 E-value=0.0059 Score=54.23 Aligned_cols=132 Identities=10% Similarity=0.087 Sum_probs=94.3
Q ss_pred eEEEEeCCccccCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCCCCChhhhhhh--cCCeEEeeccchh-hhhcCCCcC
Q 022329 106 VVYVNYGSITVMTEQHLTEFAWGLANSKRPFLWILRPDVVMGDSVVLPDEYFEEI--KDRGFIVSWCNQE-QVLSHPSVG 182 (299)
Q Consensus 106 vvyvs~GS~~~~~~~~~~~i~~al~~~~~~~lw~~~~~~~~~~~~~l~~~~~~~~--~~~~~v~~w~pq~-~iL~~~~v~ 182 (299)
-|+|++|-.- +....-.++..|.+..+.+-.+++... .-......+. .+|..+......+ .++..+++
T Consensus 160 ~ilI~lGGsD--pk~lt~kvl~~L~~~~~nl~iV~gs~~------p~l~~l~k~~~~~~~i~~~~~~~dma~LMke~d~- 230 (318)
T COG3980 160 DILITLGGSD--PKNLTLKVLAELEQKNVNLHIVVGSSN------PTLKNLRKRAEKYPNINLYIDTNDMAELMKEADL- 230 (318)
T ss_pred eEEEEccCCC--hhhhHHHHHHHhhccCeeEEEEecCCC------cchhHHHHHHhhCCCeeeEecchhHHHHHHhcch-
Confidence 4889998763 345677788888888777777776321 1112222222 3555555544434 47777887
Q ss_pred ceeeccCchhhhhhhhcCcCeeeccCCcChHhHHHHHHHHhCcEEEecCCCCHHHHHHHHHHHhcCC
Q 022329 183 AFLTHCGWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVKRGDIEALVKEMMDGD 249 (299)
Q Consensus 183 ~~ItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~i~~av~~vl~~~ 249 (299)
.|+-+|. |++|++.-|+|.+++|+.-.|-.-|+.. +.+|+-..+...++...+..-+.++++|.
T Consensus 231 -aI~AaGs-tlyEa~~lgvP~l~l~~a~NQ~~~a~~f-~~lg~~~~l~~~l~~~~~~~~~~~i~~d~ 294 (318)
T COG3980 231 -AISAAGS-TLYEALLLGVPSLVLPLAENQIATAKEF-EALGIIKQLGYHLKDLAKDYEILQIQKDY 294 (318)
T ss_pred -heeccch-HHHHHHHhcCCceEEeeeccHHHHHHHH-HhcCchhhccCCCchHHHHHHHHHhhhCH
Confidence 8888775 8999999999999999999999999999 88888877754466777777777777765
No 86
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=97.17 E-value=0.0071 Score=55.19 Aligned_cols=150 Identities=15% Similarity=0.074 Sum_probs=83.4
Q ss_pred CceEEEEeCCccc-cCHHHHHHHHHHHHcC--CCCEEEEEcCCCCCCCCCCCChhhh---h--hhcCCeEEeeccchh-h
Q 022329 104 NSVVYVNYGSITV-MTEQHLTEFAWGLANS--KRPFLWILRPDVVMGDSVVLPDEYF---E--EIKDRGFIVSWCNQE-Q 174 (299)
Q Consensus 104 ~~vvyvs~GS~~~-~~~~~~~~i~~al~~~--~~~~lw~~~~~~~~~~~~~l~~~~~---~--~~~~~~~v~~w~pq~-~ 174 (299)
...+++..|.... -..+.+.+.+..+.+. +..++++-.... ...+...+. . ...+++.+.+|.+.. .
T Consensus 184 ~~~~i~~~Gr~~~~Kg~~~li~~~~~l~~~~~~~~l~ivG~~~~----~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~ 259 (355)
T cd03819 184 GKPVILLPGRLTRWKGQEVFIEALARLKKDDPDVHLLIVGDAQG----RRFYYAELLELIKRLGLQDRVTFVGHCSDMPA 259 (355)
T ss_pred CceEEEEeeccccccCHHHHHHHHHHHHhcCCCeEEEEEECCcc----cchHHHHHHHHHHHcCCcceEEEcCCcccHHH
Confidence 3456677777642 2334444455555442 344444332221 001111111 1 224678888885443 3
Q ss_pred hhcCCCcCceeec--c-CchhhhhhhhcCcCeeeccCCcChHhHHHHHHHHhCcEEEecCCCCHHHHHHHHHHHhc-CC-
Q 022329 175 VLSHPSVGAFLTH--C-GWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVKRGDIEALVKEMMD-GD- 249 (299)
Q Consensus 175 iL~~~~v~~~ItH--g-G~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~i~~av~~vl~-~~- 249 (299)
++..+++-++-++ - ..++++||+++|+|+|+....+ ....+ ..-+.|..+. .-+.+++.++|..++. ++
T Consensus 260 ~l~~ad~~i~ps~~~e~~~~~l~EA~a~G~PvI~~~~~~----~~e~i-~~~~~g~~~~-~~~~~~l~~~i~~~~~~~~~ 333 (355)
T cd03819 260 AYALADIVVSASTEPEAFGRTAVEAQAMGRPVIASDHGG----ARETV-RPGETGLLVP-PGDAEALAQALDQILSLLPE 333 (355)
T ss_pred HHHhCCEEEecCCCCCCCchHHHHHHhcCCCEEEcCCCC----cHHHH-hCCCceEEeC-CCCHHHHHHHHHHHHhhCHH
Confidence 8888888433332 2 2469999999999999876532 33444 5545787775 4589999999976654 33
Q ss_pred hhHHHHHHHHHHHH
Q 022329 250 EGKKMRQKAWEWKK 263 (299)
Q Consensus 250 ~~~~~r~~a~~l~~ 263 (299)
+..+++++|++..+
T Consensus 334 ~~~~~~~~a~~~~~ 347 (355)
T cd03819 334 GRAKMFAKARMCVE 347 (355)
T ss_pred HHHHHHHHHHHHHH
Confidence 22345555554433
No 87
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=97.17 E-value=0.013 Score=53.47 Aligned_cols=127 Identities=9% Similarity=0.045 Sum_probs=74.5
Q ss_pred CceEEEEeCCccccCHHHHHHHHHHHHc-----CCCCEEEEEcCCCCCCCCCCCChhhhh-----hhcCCeEEeeccchh
Q 022329 104 NSVVYVNYGSITVMTEQHLTEFAWGLAN-----SKRPFLWILRPDVVMGDSVVLPDEYFE-----EIKDRGFIVSWCNQE 173 (299)
Q Consensus 104 ~~vvyvs~GS~~~~~~~~~~~i~~al~~-----~~~~~lw~~~~~~~~~~~~~l~~~~~~-----~~~~~~~v~~w~pq~ 173 (299)
+..+++..|+.. +.+....+++++.. .+.+++++-.+. ..+.+.+ ...+++.+.++..+.
T Consensus 187 ~~~~~l~~g~~~--~~kg~~~li~a~~~l~~~~~~~~l~i~G~g~--------~~~~~~~~~~~~~~~~~v~~~g~~~~~ 256 (360)
T cd04951 187 DTFVILAVGRLV--EAKDYPNLLKAFAKLLSDYLDIKLLIAGDGP--------LRATLERLIKALGLSNRVKLLGLRDDI 256 (360)
T ss_pred CCEEEEEEeeCc--hhcCcHHHHHHHHHHHhhCCCeEEEEEcCCC--------cHHHHHHHHHhcCCCCcEEEecccccH
Confidence 345667778763 22333444444432 245666654322 1122221 123578888876553
Q ss_pred -hhhcCCCcCceeec--cCchhhhhhhhcCcCeeeccCCcChHhHHHHHHHHhCcEEEecCCCCHHHHHHHHHHHhcC
Q 022329 174 -QVLSHPSVGAFLTH--CGWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVKRGDIEALVKEMMDG 248 (299)
Q Consensus 174 -~iL~~~~v~~~ItH--gG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~i~~av~~vl~~ 248 (299)
.+++.+++-++-++ |..++++||+++|+|+|+... ..+...+ ++ .|..+. .-+.+++.+++.+++++
T Consensus 257 ~~~~~~ad~~v~~s~~e~~~~~~~Ea~a~G~PvI~~~~----~~~~e~i-~~--~g~~~~-~~~~~~~~~~i~~ll~~ 326 (360)
T cd04951 257 AAYYNAADLFVLSSAWEGFGLVVAEAMACELPVVATDA----GGVREVV-GD--SGLIVP-ISDPEALANKIDEILKM 326 (360)
T ss_pred HHHHHhhceEEecccccCCChHHHHHHHcCCCEEEecC----CChhhEe-cC--CceEeC-CCCHHHHHHHHHHHHhC
Confidence 48888887222222 225689999999999998543 4455555 44 344443 35889999999999854
No 88
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=97.16 E-value=0.064 Score=51.33 Aligned_cols=83 Identities=11% Similarity=0.084 Sum_probs=58.6
Q ss_pred cCCeEEeeccchhh---hhcCC--CcCceeec----cCchhhhhhhhcCcCeeeccCCcChHhHHHHHHHHhCcEEEecC
Q 022329 161 KDRGFIVSWCNQEQ---VLSHP--SVGAFLTH----CGWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNH 231 (299)
Q Consensus 161 ~~~~~v~~w~pq~~---iL~~~--~v~~~ItH----gG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~ 231 (299)
.+++.+.+++++.+ ++..+ +..+||.. |-..+++||+++|+|+|+....+ ....+ +.-..|+.+.
T Consensus 316 ~~~V~f~g~~~~~~~~~~~~~a~~~~Dv~v~pS~~E~fg~~~lEAma~G~PvV~s~~gg----~~eiv-~~~~~G~lv~- 389 (439)
T TIGR02472 316 YGKVAYPKHHRPDDVPELYRLAARSRGIFVNPALTEPFGLTLLEAAACGLPIVATDDGG----PRDII-ANCRNGLLVD- 389 (439)
T ss_pred CceEEecCCCCHHHHHHHHHHHhhcCCEEecccccCCcccHHHHHHHhCCCEEEeCCCC----cHHHh-cCCCcEEEeC-
Confidence 46777888887665 35544 12337653 33458999999999999987643 34444 5545788776
Q ss_pred CCCHHHHHHHHHHHhcCC
Q 022329 232 DVKRGDIEALVKEMMDGD 249 (299)
Q Consensus 232 ~~~~~~i~~av~~vl~~~ 249 (299)
.-+.+++.++|.++++|+
T Consensus 390 ~~d~~~la~~i~~ll~~~ 407 (439)
T TIGR02472 390 VLDLEAIASALEDALSDS 407 (439)
T ss_pred CCCHHHHHHHHHHHHhCH
Confidence 458899999999999875
No 89
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=97.14 E-value=0.072 Score=52.04 Aligned_cols=98 Identities=12% Similarity=0.152 Sum_probs=67.3
Q ss_pred cCCeEEeeccchhhhhcCCCcCceee---ccC-chhhhhhhhcCcCeeeccCCcChHhHHHHHHHHhCcEEEecC---CC
Q 022329 161 KDRGFIVSWCNQEQVLSHPSVGAFLT---HCG-WNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNH---DV 233 (299)
Q Consensus 161 ~~~~~v~~w~pq~~iL~~~~v~~~It---HgG-~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~---~~ 233 (299)
.+++.+.++.+-..++..+++ ||. .=| ..+++||+++|+|+|+....+ .+...+ +.-..|..+.. .-
T Consensus 375 ~~~V~f~G~~~~~~~~~~adv--~v~pS~~Egfgl~~lEAma~G~PVI~~dv~~---G~~eiI-~~g~nG~lv~~~~~~~ 448 (500)
T TIGR02918 375 QDYIHLKGHRNLSEVYKDYEL--YLSASTSEGFGLTLMEAVGSGLGMIGFDVNY---GNPTFI-EDNKNGYLIPIDEEED 448 (500)
T ss_pred CCeEEEcCCCCHHHHHHhCCE--EEEcCccccccHHHHHHHHhCCCEEEecCCC---CCHHHc-cCCCCEEEEeCCcccc
Confidence 356778888877789988888 553 223 468999999999999977531 133344 45457877752 12
Q ss_pred C----HHHHHHHHHHHhcCChhHHHHHHHHHHHHH
Q 022329 234 K----RGDIEALVKEMMDGDEGKKMRQKAWEWKKK 264 (299)
Q Consensus 234 ~----~~~i~~av~~vl~~~~~~~~r~~a~~l~~~ 264 (299)
+ .+.+.++|.++++++....+.+++++.++.
T Consensus 449 d~~~~~~~la~~I~~ll~~~~~~~~~~~a~~~a~~ 483 (500)
T TIGR02918 449 DEDQIITALAEKIVEYFNSNDIDAFHEYSYQIAEG 483 (500)
T ss_pred chhHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHh
Confidence 2 788999999999655445666777665544
No 90
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=97.14 E-value=0.014 Score=54.23 Aligned_cols=141 Identities=14% Similarity=0.095 Sum_probs=81.8
Q ss_pred eEEEEeCCccccCHHHHHHHHHHHHcC--CCCEEEEEcCCCCCCCCCCCChhhhh---hhc---CCeE-Eeeccchhh--
Q 022329 106 VVYVNYGSITVMTEQHLTEFAWGLANS--KRPFLWILRPDVVMGDSVVLPDEYFE---EIK---DRGF-IVSWCNQEQ-- 174 (299)
Q Consensus 106 vvyvs~GS~~~~~~~~~~~i~~al~~~--~~~~lw~~~~~~~~~~~~~l~~~~~~---~~~---~~~~-v~~w~pq~~-- 174 (299)
.+++..|... +.+.+..+++++... +..++++.+.... ..+-+.+.+ ... .++. +.+++++..
T Consensus 202 ~~i~~~Grl~--~~Kg~~~li~a~~~l~~~~~l~i~g~g~~~----~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 275 (388)
T TIGR02149 202 PYILFVGRIT--RQKGVPHLLDAVHYIPKDVQVVLCAGAPDT----PEVAEEVRQAVALLDRNRTGIIWINKMLPKEELV 275 (388)
T ss_pred eEEEEEcccc--cccCHHHHHHHHHHHhhcCcEEEEeCCCCc----HHHHHHHHHHHHHhccccCceEEecCCCCHHHHH
Confidence 4556667764 234456666666654 4566655443210 000011111 111 2344 346777543
Q ss_pred -hhcCCCcCceeec----cCchhhhhhhhcCcCeeeccCCcChHhHHHHHHHHhCcEEEecCCCCH------HHHHHHHH
Q 022329 175 -VLSHPSVGAFLTH----CGWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVKR------GDIEALVK 243 (299)
Q Consensus 175 -iL~~~~v~~~ItH----gG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~------~~i~~av~ 243 (299)
++.++++ ||.= +...+++||+++|+|+|+.... .....+ +.-+.|..+.. -+. +++.++|.
T Consensus 276 ~~~~~aDv--~v~ps~~e~~g~~~lEA~a~G~PvI~s~~~----~~~e~i-~~~~~G~~~~~-~~~~~~~~~~~l~~~i~ 347 (388)
T TIGR02149 276 ELLSNAEV--FVCPSIYEPLGIVNLEAMACGTPVVASATG----GIPEVV-VDGETGFLVPP-DNSDADGFQAELAKAIN 347 (388)
T ss_pred HHHHhCCE--EEeCCccCCCChHHHHHHHcCCCEEEeCCC----CHHHHh-hCCCceEEcCC-CCCcccchHHHHHHHHH
Confidence 7888888 6542 2345789999999999997653 344555 56567888864 233 89999999
Q ss_pred HHhcCCh-hHHHHHHHHH
Q 022329 244 EMMDGDE-GKKMRQKAWE 260 (299)
Q Consensus 244 ~vl~~~~-~~~~r~~a~~ 260 (299)
++++|++ .+.+.+++++
T Consensus 348 ~l~~~~~~~~~~~~~a~~ 365 (388)
T TIGR02149 348 ILLADPELAKKMGIAGRK 365 (388)
T ss_pred HHHhCHHHHHHHHHHHHH
Confidence 9998753 2344455444
No 91
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=97.04 E-value=0.011 Score=54.99 Aligned_cols=91 Identities=13% Similarity=0.145 Sum_probs=64.3
Q ss_pred cCCeEEeeccchhh---hhcCCCcCceeec---cC-chhhhhhhhcCcCeeeccCCcChHhHHHHHHHHhCcEEEecCCC
Q 022329 161 KDRGFIVSWCNQEQ---VLSHPSVGAFLTH---CG-WNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDV 233 (299)
Q Consensus 161 ~~~~~v~~w~pq~~---iL~~~~v~~~ItH---gG-~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~ 233 (299)
.+++.+.+++|+.. ++..+++ ++.. -| ..+++||+++|+|+|+.-..+ ....+ ...+.|..+. .
T Consensus 279 ~~~V~f~g~~~~~~~~~~l~~ad~--~l~~s~~E~~g~~~lEAma~G~PvI~s~~~~----~~e~i-~~~~~g~~~~--~ 349 (392)
T cd03805 279 EDQVIFLPSISDSQKELLLSSARA--LLYTPSNEHFGIVPLEAMYAGKPVIACNSGG----PLETV-VDGETGFLCE--P 349 (392)
T ss_pred CceEEEeCCCChHHHHHHHhhCeE--EEECCCcCCCCchHHHHHHcCCCEEEECCCC----cHHHh-ccCCceEEeC--C
Confidence 46889999999764 6778887 5532 11 357899999999999975533 33345 5556787775 3
Q ss_pred CHHHHHHHHHHHhcCCh-hHHHHHHHHH
Q 022329 234 KRGDIEALVKEMMDGDE-GKKMRQKAWE 260 (299)
Q Consensus 234 ~~~~i~~av~~vl~~~~-~~~~r~~a~~ 260 (299)
+.+++.++|.+++++++ ..++.+++++
T Consensus 350 ~~~~~a~~i~~l~~~~~~~~~~~~~a~~ 377 (392)
T cd03805 350 TPEEFAEAMLKLANDPDLADRMGAAGRK 377 (392)
T ss_pred CHHHHHHHHHHHHhChHHHHHHHHHHHH
Confidence 89999999999998763 3345555544
No 92
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=96.89 E-value=0.046 Score=51.40 Aligned_cols=93 Identities=18% Similarity=0.173 Sum_probs=63.5
Q ss_pred cCCeEEeeccchhh-hhcCCCcCceeec--cCc-hhhhhhhhcCcCeeeccCCcChHhHHHHHHHHhCcEEEecCCCCHH
Q 022329 161 KDRGFIVSWCNQEQ-VLSHPSVGAFLTH--CGW-NSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVKRG 236 (299)
Q Consensus 161 ~~~~~v~~w~pq~~-iL~~~~v~~~ItH--gG~-~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~ 236 (299)
..++.+.+++++.. ++.++++-++-++ .|. +.++||+++|+|+|+.+...+. +.+..|.|+.+. -+.+
T Consensus 279 ~~~V~~~G~v~~~~~~~~~adv~v~Ps~~~eG~~~~~lEAma~G~PVV~t~~~~~~------i~~~~~~g~lv~--~~~~ 350 (397)
T TIGR03087 279 LPGVTVTGSVADVRPYLAHAAVAVAPLRIARGIQNKVLEAMAMAKPVVASPEAAEG------IDALPGAELLVA--ADPA 350 (397)
T ss_pred CCCeEEeeecCCHHHHHHhCCEEEecccccCCcccHHHHHHHcCCCEEecCccccc------ccccCCcceEeC--CCHH
Confidence 35788899998654 7888888322243 343 4699999999999998864321 112346777764 4899
Q ss_pred HHHHHHHHHhcCCh-hHHHHHHHHHH
Q 022329 237 DIEALVKEMMDGDE-GKKMRQKAWEW 261 (299)
Q Consensus 237 ~i~~av~~vl~~~~-~~~~r~~a~~l 261 (299)
++.++|.++++|++ .+.+.+++++.
T Consensus 351 ~la~ai~~ll~~~~~~~~~~~~ar~~ 376 (397)
T TIGR03087 351 DFAAAILALLANPAEREELGQAARRR 376 (397)
T ss_pred HHHHHHHHHHcCHHHHHHHHHHHHHH
Confidence 99999999998763 23455555443
No 93
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=96.89 E-value=0.031 Score=49.81 Aligned_cols=83 Identities=12% Similarity=0.062 Sum_probs=55.9
Q ss_pred cCCeEEeeccchh-hhhcCCCcCceeec--cCchhhhhhhhcCcCeeeccCCcChHhHHHHHHHHhCcEEEecCCCCHHH
Q 022329 161 KDRGFIVSWCNQE-QVLSHPSVGAFLTH--CGWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVKRGD 237 (299)
Q Consensus 161 ~~~~~v~~w~pq~-~iL~~~~v~~~ItH--gG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~ 237 (299)
..++.+.+|.+.. .++..+++-++-++ |..++++||+++|+|+|+.... .....+ +..+.|.... .-+.+.
T Consensus 245 ~~~v~~~g~~~~~~~~~~~~d~~i~ps~~e~~~~~~~Ea~~~G~PvI~~~~~----~~~e~i-~~~~~g~~~~-~~~~~~ 318 (353)
T cd03811 245 ADRVHFLGFQSNPYPYLKAADLFVLSSRYEGFPNVLLEAMALGTPVVATDCP----GPREIL-EDGENGLLVP-VGDEAA 318 (353)
T ss_pred CccEEEecccCCHHHHHHhCCEEEeCcccCCCCcHHHHHHHhCCCEEEcCCC----ChHHHh-cCCCceEEEC-CCCHHH
Confidence 4677888887654 48888887333222 3356899999999999986554 445556 6667888886 456777
Q ss_pred H---HHHHHHHhcCC
Q 022329 238 I---EALVKEMMDGD 249 (299)
Q Consensus 238 i---~~av~~vl~~~ 249 (299)
+ .+++.+++.++
T Consensus 319 ~~~~~~~i~~~~~~~ 333 (353)
T cd03811 319 LAAAALALLDLLLDP 333 (353)
T ss_pred HHHHHHHHHhccCCh
Confidence 7 44555555544
No 94
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=96.88 E-value=0.013 Score=54.46 Aligned_cols=194 Identities=15% Similarity=0.096 Sum_probs=100.3
Q ss_pred HHHHHHHhhccCccEEEEcCcccccHHHHHHHHhcC---CcEEEeCCccCcchhhhhhhhhcCCCCCccccchhHHhhcc
Q 022329 24 DFLGSEAQNCFKSSAIIFNTFDEFEHEALEVIASKF---PNIYTVGPLPLLCKQVVEAKFRSFGSSLWKEDTDCLKWLDK 100 (299)
Q Consensus 24 ~~~~~~~~~~~~~~~~l~ns~~~le~~~~~~~r~~~---p~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~ 100 (299)
+..++.... -|++-++.| ..+.+.+.... .+++.||......-.... +... ........+..
T Consensus 113 e~~R~~i~~--la~lhf~~t-----~~~~~~L~~~G~~~~rI~~vG~~~~D~l~~~~----~~~~----~~~~~~~i~~~ 177 (346)
T PF02350_consen 113 EINRHAIDK--LAHLHFAPT-----EEARERLLQEGEPPERIFVVGNPGIDALLQNK----EEIE----EKYKNSGILQD 177 (346)
T ss_dssp HHHHHHHHH--H-SEEEESS-----HHHHHHHHHTT--GGGEEE---HHHHHHHHHH----HTTC----C-HHHHHHHHC
T ss_pred hhhhhhhhh--hhhhhccCC-----HHHHHHHHhcCCCCCeEEEEChHHHHHHHHhH----HHHh----hhhhhHHHHhc
Confidence 344444442 367888888 44444444432 389999975432111000 0000 00000122222
Q ss_pred CCCCceEEEEeCCccccC----HHHHHHHHHHHHcC-CCCEEEEEcCCCCCCCCCCCChhhhhhhcCCeEEeeccch---
Q 022329 101 RDANSVVYVNYGSITVMT----EQHLTEFAWGLANS-KRPFLWILRPDVVMGDSVVLPDEYFEEIKDRGFIVSWCNQ--- 172 (299)
Q Consensus 101 ~~~~~vvyvs~GS~~~~~----~~~~~~i~~al~~~-~~~~lw~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~w~pq--- 172 (299)
.+++.+++++=...... ...+..++++|.+. ++++||.+.+...- ...+ ....... +|+.+.+-+++
T Consensus 178 -~~~~~iLvt~H~~t~~~~~~~~~~i~~~l~~L~~~~~~~vi~~~hn~p~~--~~~i-~~~l~~~-~~v~~~~~l~~~~~ 252 (346)
T PF02350_consen 178 -APKPYILVTLHPVTNEDNPERLEQILEALKALAERQNVPVIFPLHNNPRG--SDII-IEKLKKY-DNVRLIEPLGYEEY 252 (346)
T ss_dssp -TTSEEEEEE-S-CCCCTHH--HHHHHHHHHHHHHHTTEEEEEE--S-HHH--HHHH-HHHHTT--TTEEEE----HHHH
T ss_pred -cCCCEEEEEeCcchhcCChHHHHHHHHHHHHHHhcCCCcEEEEecCCchH--HHHH-HHHhccc-CCEEEECCCCHHHH
Confidence 46788999985544333 34555666666665 78899988743100 0001 1111223 48887755544
Q ss_pred hhhhcCCCcCceeeccCchhhh-hhhhcCcCeeeccCCcChHhHHHHHHHHhCcEEEecCCCCHHHHHHHHHHHhcC
Q 022329 173 EQVLSHPSVGAFLTHCGWNSTM-ESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVKRGDIEALVKEMMDG 248 (299)
Q Consensus 173 ~~iL~~~~v~~~ItHgG~~s~~-Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~i~~av~~vl~~ 248 (299)
..+|.++++ +||..| +++ ||.+.|+|.|.+=..++.+. - ...|..+.+ ..+.++|.+++.+++++
T Consensus 253 l~ll~~a~~--vvgdSs--GI~eEa~~lg~P~v~iR~~geRqe---~--r~~~~nvlv--~~~~~~I~~ai~~~l~~ 318 (346)
T PF02350_consen 253 LSLLKNADL--VVGDSS--GIQEEAPSLGKPVVNIRDSGERQE---G--RERGSNVLV--GTDPEAIIQAIEKALSD 318 (346)
T ss_dssp HHHHHHESE--EEESSH--HHHHHGGGGT--EEECSSS-S-HH---H--HHTTSEEEE--TSSHHHHHHHHHHHHH-
T ss_pred HHHHhcceE--EEEcCc--cHHHHHHHhCCeEEEecCCCCCHH---H--HhhcceEEe--CCCHHHHHHHHHHHHhC
Confidence 458888888 999999 676 99999999999933333222 2 234666655 37999999999999975
No 95
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=96.70 E-value=0.028 Score=50.82 Aligned_cols=129 Identities=13% Similarity=-0.027 Sum_probs=79.9
Q ss_pred eEEEEeCCccccCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCCCCChhhhhh--hcCCeEEeeccchhh---hhcCCC
Q 022329 106 VVYVNYGSITVMTEQHLTEFAWGLANSKRPFLWILRPDVVMGDSVVLPDEYFEE--IKDRGFIVSWCNQEQ---VLSHPS 180 (299)
Q Consensus 106 vvyvs~GS~~~~~~~~~~~i~~al~~~~~~~lw~~~~~~~~~~~~~l~~~~~~~--~~~~~~v~~w~pq~~---iL~~~~ 180 (299)
.+.+..|... ..+....+++++.+.+.++++.-.... ...+.....+. ..+++.+.+++++.. +++.++
T Consensus 172 ~~i~~~Gr~~--~~Kg~~~li~~~~~~~~~l~i~G~~~~----~~~~~~~~~~~~~~~~~v~~~G~~~~~~~~~~~~~~d 245 (335)
T cd03802 172 DYLLFLGRIS--PEKGPHLAIRAARRAGIPLKLAGPVSD----PDYFYREIAPELLDGPDIEYLGEVGGAEKAELLGNAR 245 (335)
T ss_pred CEEEEEEeec--cccCHHHHHHHHHhcCCeEEEEeCCCC----HHHHHHHHHHhcccCCcEEEeCCCCHHHHHHHHHhCc
Confidence 3445567763 334456677788878877665443221 00000011111 257888999998764 677788
Q ss_pred cCceeec--cC-chhhhhhhhcCcCeeeccCCcChHhHHHHHHHHhCcEEEecCCCCHHHHHHHHHHHhcC
Q 022329 181 VGAFLTH--CG-WNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVKRGDIEALVKEMMDG 248 (299)
Q Consensus 181 v~~~ItH--gG-~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~i~~av~~vl~~ 248 (299)
+-++-+. -| ..+++||+++|+|+|+.... .+...+ +.-..|..+. ..+++.+++.+++..
T Consensus 246 ~~v~ps~~~E~~~~~~lEAma~G~PvI~~~~~----~~~e~i-~~~~~g~l~~---~~~~l~~~l~~l~~~ 308 (335)
T cd03802 246 ALLFPILWEEPFGLVMIEAMACGTPVIAFRRG----AVPEVV-EDGVTGFLVD---SVEELAAAVARADRL 308 (335)
T ss_pred EEEeCCcccCCcchHHHHHHhcCCCEEEeCCC----Cchhhe-eCCCcEEEeC---CHHHHHHHHHHHhcc
Confidence 7333332 33 45899999999999988763 233344 4434787776 299999999988653
No 96
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=96.68 E-value=0.044 Score=50.00 Aligned_cols=83 Identities=14% Similarity=0.023 Sum_probs=57.8
Q ss_pred cCCeEEeeccchh-hhhcCCCcCceeec--cCchhhhhhhhcCcCeeeccCCcChHhHHHHHHHHhCcEEEecCCCCHHH
Q 022329 161 KDRGFIVSWCNQE-QVLSHPSVGAFLTH--CGWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVKRGD 237 (299)
Q Consensus 161 ~~~~~v~~w~pq~-~iL~~~~v~~~ItH--gG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~ 237 (299)
.+++.+.++..+. .++..+++-++-+. |-.++++||+++|+|+|+....+ ....+ +. +.|.... .-+.++
T Consensus 248 ~~~v~~~g~~~~~~~~~~~adi~v~ps~~E~~~~~~lEAma~G~PvI~s~~~~----~~~~i-~~-~~~~~~~-~~~~~~ 320 (358)
T cd03812 248 EDKVIFLGVRNDVPELLQAMDVFLFPSLYEGLPLVLIEAQASGLPCILSDTIT----KEVDL-TD-LVKFLSL-DESPEI 320 (358)
T ss_pred CCcEEEecccCCHHHHHHhcCEEEecccccCCCHHHHHHHHhCCCEEEEcCCc----hhhhh-cc-CccEEeC-CCCHHH
Confidence 4678888875443 48888887332222 44678999999999999876644 33344 44 5555554 346899
Q ss_pred HHHHHHHHhcCCh
Q 022329 238 IEALVKEMMDGDE 250 (299)
Q Consensus 238 i~~av~~vl~~~~ 250 (299)
+.++|.++++|++
T Consensus 321 ~a~~i~~l~~~~~ 333 (358)
T cd03812 321 WAEEILKLKSEDR 333 (358)
T ss_pred HHHHHHHHHhCcc
Confidence 9999999999873
No 97
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=96.65 E-value=0.0089 Score=56.19 Aligned_cols=93 Identities=20% Similarity=0.179 Sum_probs=64.3
Q ss_pred CCeEEeeccchhh---hhcCCCcCceeec-cC-chhhhhhhhcCcCeeeccCCcChHhHHHHHHHHhCcEEEecCCCCHH
Q 022329 162 DRGFIVSWCNQEQ---VLSHPSVGAFLTH-CG-WNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVKRG 236 (299)
Q Consensus 162 ~~~~v~~w~pq~~---iL~~~~v~~~ItH-gG-~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~ 236 (299)
+++.+.+++|+.. ++..+++-++.+. .| ..+++||+++|+|+|+... ......+ ..-..|..+. .-+.+
T Consensus 281 ~~V~f~G~v~~~~~~~~l~~adv~v~~s~~e~~~~~llEAmA~G~PVIas~~----~g~~e~i-~~~~~G~lv~-~~d~~ 354 (396)
T cd03818 281 SRVHFLGRVPYDQYLALLQVSDVHVYLTYPFVLSWSLLEAMACGCLVVGSDT----APVREVI-TDGENGLLVD-FFDPD 354 (396)
T ss_pred ceEEEeCCCCHHHHHHHHHhCcEEEEcCcccccchHHHHHHHCCCCEEEcCC----CCchhhc-ccCCceEEcC-CCCHH
Confidence 5788899999765 6778888333333 22 3489999999999998754 3344445 4445677765 45799
Q ss_pred HHHHHHHHHhcCCh-hHHHHHHHHH
Q 022329 237 DIEALVKEMMDGDE-GKKMRQKAWE 260 (299)
Q Consensus 237 ~i~~av~~vl~~~~-~~~~r~~a~~ 260 (299)
++.++|.++++|++ ..++.+++++
T Consensus 355 ~la~~i~~ll~~~~~~~~l~~~ar~ 379 (396)
T cd03818 355 ALAAAVIELLDDPARRARLRRAARR 379 (396)
T ss_pred HHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 99999999998762 2344444444
No 98
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=96.64 E-value=0.084 Score=49.04 Aligned_cols=90 Identities=17% Similarity=0.117 Sum_probs=59.2
Q ss_pred cCCeEEeecc--chh---hhhcCCCcCceeecc----CchhhhhhhhcCcCeeeccCCcChHhHHHHHHHHhCcEEEecC
Q 022329 161 KDRGFIVSWC--NQE---QVLSHPSVGAFLTHC----GWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNH 231 (299)
Q Consensus 161 ~~~~~v~~w~--pq~---~iL~~~~v~~~ItHg----G~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~ 231 (299)
.+++.+.++. ++. .+++.+++ |+.-. -..+++||+++|+|+|+....+ ....+ ..-..|+.+.
T Consensus 251 ~~~v~~~~~~~~~~~~~~~~~~~ad~--~v~~s~~Eg~g~~~lEA~a~G~Pvv~s~~~~----~~~~i-~~~~~g~~~~- 322 (372)
T cd03792 251 DPDIHVLTLPPVSDLEVNALQRASTV--VLQKSIREGFGLTVTEALWKGKPVIAGPVGG----IPLQI-EDGETGFLVD- 322 (372)
T ss_pred CCCeEEEecCCCCHHHHHHHHHhCeE--EEeCCCccCCCHHHHHHHHcCCCEEEcCCCC----chhhc-ccCCceEEeC-
Confidence 3567777776 433 36777777 76432 2458999999999999976532 22334 5556677665
Q ss_pred CCCHHHHHHHHHHHhcCCh-hHHHHHHHHH
Q 022329 232 DVKRGDIEALVKEMMDGDE-GKKMRQKAWE 260 (299)
Q Consensus 232 ~~~~~~i~~av~~vl~~~~-~~~~r~~a~~ 260 (299)
+.+.+..++.+++++++ .+++.+++++
T Consensus 323 --~~~~~a~~i~~ll~~~~~~~~~~~~a~~ 350 (372)
T cd03792 323 --TVEEAAVRILYLLRDPELRRKMGANARE 350 (372)
T ss_pred --CcHHHHHHHHHHHcCHHHHHHHHHHHHH
Confidence 56778889999998752 2345555544
No 99
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=96.59 E-value=0.088 Score=49.50 Aligned_cols=79 Identities=15% Similarity=0.105 Sum_probs=55.2
Q ss_pred cCCeEEeeccchhh---hhcCCCcCceee---ccCc-hhhhhhhhcCcCeeeccCCcChHhHHHHHHHHhCcEEEecCCC
Q 022329 161 KDRGFIVSWCNQEQ---VLSHPSVGAFLT---HCGW-NSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDV 233 (299)
Q Consensus 161 ~~~~~v~~w~pq~~---iL~~~~v~~~It---HgG~-~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~ 233 (299)
.+++.+.+|+|+.+ +++.+++ ||. +-|. .+++||+++|+|+|+.+..+ ....+ .. |.+.... .
T Consensus 249 ~~~v~~~G~~~~~~~~~~l~~ad~--~v~pS~~E~~g~~~~EAma~G~PVI~s~~gg----~~e~i-~~-~~~~~~~--~ 318 (398)
T cd03796 249 QDRVELLGAVPHERVRDVLVQGHI--FLNTSLTEAFCIAIVEAASCGLLVVSTRVGG----IPEVL-PP-DMILLAE--P 318 (398)
T ss_pred CCeEEEeCCCCHHHHHHHHHhCCE--EEeCChhhccCHHHHHHHHcCCCEEECCCCC----chhhe-eC-CceeecC--C
Confidence 45688899998654 7778887 543 2233 49999999999999987753 22333 33 4343333 3
Q ss_pred CHHHHHHHHHHHhcCC
Q 022329 234 KRGDIEALVKEMMDGD 249 (299)
Q Consensus 234 ~~~~i~~av~~vl~~~ 249 (299)
+.+++.+++.+++++.
T Consensus 319 ~~~~l~~~l~~~l~~~ 334 (398)
T cd03796 319 DVESIVRKLEEAISIL 334 (398)
T ss_pred CHHHHHHHHHHHHhCh
Confidence 7899999999999853
No 100
>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process
Probab=96.57 E-value=0.074 Score=49.89 Aligned_cols=206 Identities=20% Similarity=0.163 Sum_probs=106.2
Q ss_pred cccccHHHHHHHHhcCCcEEEeC-CccCcchhhhhhhhhcCCCCCccccchhHHhhccCCCCceEEEEeCCccccCHHHH
Q 022329 44 FDEFEHEALEVIASKFPNIYTVG-PLPLLCKQVVEAKFRSFGSSLWKEDTDCLKWLDKRDANSVVYVNYGSITVMTEQHL 122 (299)
Q Consensus 44 ~~~le~~~~~~~r~~~p~v~~VG-pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~vvyvs~GS~~~~~~~~~ 122 (299)
..-+|.++ ++...-++.||| |+........ .+....+.+ -.+++++|.+--||-..--...+
T Consensus 140 ifPFE~~~---y~~~g~~~~~VGHPl~d~~~~~~-------------~~~~~~~~~-l~~~~~iIaLLPGSR~~EI~rll 202 (373)
T PF02684_consen 140 IFPFEPEF---YKKHGVPVTYVGHPLLDEVKPEP-------------DRAEAREKL-LDPDKPIIALLPGSRKSEIKRLL 202 (373)
T ss_pred CCcccHHH---HhccCCCeEEECCcchhhhccCC-------------CHHHHHHhc-CCCCCcEEEEeCCCCHHHHHHHH
Confidence 34466664 355556799999 6654322100 111112222 22367899999999842112233
Q ss_pred HHHHHH---HHc--CCCCEEEEEcCCCCCCCCCCCChhhhhhhcCCeEEe-eccchhhhhcCCCcCceeeccCchhhhhh
Q 022329 123 TEFAWG---LAN--SKRPFLWILRPDVVMGDSVVLPDEYFEEIKDRGFIV-SWCNQEQVLSHPSVGAFLTHCGWNSTMES 196 (299)
Q Consensus 123 ~~i~~a---l~~--~~~~~lw~~~~~~~~~~~~~l~~~~~~~~~~~~~v~-~w~pq~~iL~~~~v~~~ItHgG~~s~~Ea 196 (299)
..++++ +.+ .+.+|++....... ..+-.........++.+. ..-.-.+++..+++ .+.-.|. .++|+
T Consensus 203 P~~l~aa~~l~~~~p~l~fvvp~a~~~~----~~~i~~~~~~~~~~~~~~~~~~~~~~~m~~ad~--al~~SGT-aTLE~ 275 (373)
T PF02684_consen 203 PIFLEAAKLLKKQRPDLQFVVPVAPEVH----EELIEEILAEYPPDVSIVIIEGESYDAMAAADA--ALAASGT-ATLEA 275 (373)
T ss_pred HHHHHHHHHHHHhCCCeEEEEecCCHHH----HHHHHHHHHhhCCCCeEEEcCCchHHHHHhCcc--hhhcCCH-HHHHH
Confidence 333443 333 34566655432200 000001111112233322 22234457777777 5555554 67899
Q ss_pred hhcCcCeeeccCCc-ChHhHHHHHHHHhC-cEE-------Ee-----cCCCCHHHHHHHHHHHhcCChhHHHHHHHHHHH
Q 022329 197 ICGGVPVICWPFFA-EQQTNCRYACTTWG-IGM-------EV-----NHDVKRGDIEALVKEMMDGDEGKKMRQKAWEWK 262 (299)
Q Consensus 197 l~~GvP~i~~P~~~-DQ~~na~~v~~~~g-~G~-------~l-----~~~~~~~~i~~av~~vl~~~~~~~~r~~a~~l~ 262 (299)
...|+|||++=-.. =-+.-|+++ .+.. +|+ .+ ..+++++.+.+++.++++|. ..++..+...
T Consensus 276 Al~g~P~Vv~Yk~~~lt~~iak~l-vk~~~isL~Niia~~~v~PEliQ~~~~~~~i~~~~~~ll~~~---~~~~~~~~~~ 351 (373)
T PF02684_consen 276 ALLGVPMVVAYKVSPLTYFIAKRL-VKVKYISLPNIIAGREVVPELIQEDATPENIAAELLELLENP---EKRKKQKELF 351 (373)
T ss_pred HHhCCCEEEEEcCcHHHHHHHHHh-hcCCEeechhhhcCCCcchhhhcccCCHHHHHHHHHHHhcCH---HHHHHHHHHH
Confidence 99999999874321 223345555 2222 111 01 11589999999999999987 3354545555
Q ss_pred HHHHHHHhcCCchHH
Q 022329 263 KKAEAATAVGGQSYN 277 (299)
Q Consensus 263 ~~~~~~~~~gg~s~~ 277 (299)
+.+++....+.++..
T Consensus 352 ~~~~~~~~~~~~~~~ 366 (373)
T PF02684_consen 352 REIRQLLGPGASSRA 366 (373)
T ss_pred HHHHHhhhhccCCHH
Confidence 555555566666554
No 101
>PLN02949 transferase, transferring glycosyl groups
Probab=96.53 E-value=0.095 Score=50.71 Aligned_cols=94 Identities=10% Similarity=-0.001 Sum_probs=59.4
Q ss_pred cCCeEEeeccchhh---hhcCCCcCceee---ccCc-hhhhhhhhcCcCeeeccCCcChHhHHHHHHH-HhC-cEEEecC
Q 022329 161 KDRGFIVSWCNQEQ---VLSHPSVGAFLT---HCGW-NSTMESICGGVPVICWPFFAEQQTNCRYACT-TWG-IGMEVNH 231 (299)
Q Consensus 161 ~~~~~v~~w~pq~~---iL~~~~v~~~It---HgG~-~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~-~~g-~G~~l~~ 231 (299)
.+++.+.+++|+.+ +|+.+++ +|. +=|. .++.||+++|+|+|+....+-- ...+.+ ..| .|....
T Consensus 334 ~~~V~f~g~v~~~el~~ll~~a~~--~v~~s~~E~FGivvlEAMA~G~PVIa~~~gGp~---~eIV~~~~~g~tG~l~~- 407 (463)
T PLN02949 334 DGDVEFHKNVSYRDLVRLLGGAVA--GLHSMIDEHFGISVVEYMAAGAVPIAHNSAGPK---MDIVLDEDGQQTGFLAT- 407 (463)
T ss_pred CCcEEEeCCCCHHHHHHHHHhCcE--EEeCCccCCCChHHHHHHHcCCcEEEeCCCCCc---ceeeecCCCCcccccCC-
Confidence 57788999998665 6777777 552 2232 3799999999999998764310 001101 012 344432
Q ss_pred CCCHHHHHHHHHHHhcCC-h-hHHHHHHHHHHH
Q 022329 232 DVKRGDIEALVKEMMDGD-E-GKKMRQKAWEWK 262 (299)
Q Consensus 232 ~~~~~~i~~av~~vl~~~-~-~~~~r~~a~~l~ 262 (299)
+.+++.+++.++++++ + .+++.+++++..
T Consensus 408 --~~~~la~ai~~ll~~~~~~r~~m~~~ar~~~ 438 (463)
T PLN02949 408 --TVEEYADAILEVLRMRETERLEIAAAARKRA 438 (463)
T ss_pred --CHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 8999999999999843 1 234555555543
No 102
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=96.41 E-value=0.1 Score=50.54 Aligned_cols=91 Identities=13% Similarity=0.156 Sum_probs=61.3
Q ss_pred cCCeEEeeccchhhhhcCCCcCceeec----cCchhhhhhhhcCcCeeeccCCcChHhHHHHHHHHh------CcEEEec
Q 022329 161 KDRGFIVSWCNQEQVLSHPSVGAFLTH----CGWNSTMESICGGVPVICWPFFAEQQTNCRYACTTW------GIGMEVN 230 (299)
Q Consensus 161 ~~~~~v~~w~pq~~iL~~~~v~~~ItH----gG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~------g~G~~l~ 230 (299)
.+++.+.+...-..++...++ +|.- |--++++||+++|+|+|+-.. ......+ +.. ..|..+.
T Consensus 353 ~~~V~f~G~~~v~~~l~~aDv--~vlpS~~Eg~p~~vlEAma~G~PVVatd~----g~~~elv-~~~~~~~~g~~G~lv~ 425 (475)
T cd03813 353 EDNVKFTGFQNVKEYLPKLDV--LVLTSISEGQPLVILEAMAAGIPVVATDV----GSCRELI-EGADDEALGPAGEVVP 425 (475)
T ss_pred CCeEEEcCCccHHHHHHhCCE--EEeCchhhcCChHHHHHHHcCCCEEECCC----CChHHHh-cCCcccccCCceEEEC
Confidence 467888775555568877777 5432 345689999999999999544 3333444 442 2677775
Q ss_pred CCCCHHHHHHHHHHHhcCCh-hHHHHHHHH
Q 022329 231 HDVKRGDIEALVKEMMDGDE-GKKMRQKAW 259 (299)
Q Consensus 231 ~~~~~~~i~~av~~vl~~~~-~~~~r~~a~ 259 (299)
..+.+++.+++.++++|++ .+.+.++++
T Consensus 426 -~~d~~~la~ai~~ll~~~~~~~~~~~~a~ 454 (475)
T cd03813 426 -PADPEALARAILRLLKDPELRRAMGEAGR 454 (475)
T ss_pred -CCCHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 4689999999999998762 223444444
No 103
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=96.33 E-value=0.11 Score=47.37 Aligned_cols=124 Identities=16% Similarity=0.191 Sum_probs=70.3
Q ss_pred EEEeCCccccCHHHHHHHHHHHHcCC--CCEEEEEcCCCCCCCCCCCChhhh--hhhcCCeEEeeccchhh---hhcCCC
Q 022329 108 YVNYGSITVMTEQHLTEFAWGLANSK--RPFLWILRPDVVMGDSVVLPDEYF--EEIKDRGFIVSWCNQEQ---VLSHPS 180 (299)
Q Consensus 108 yvs~GS~~~~~~~~~~~i~~al~~~~--~~~lw~~~~~~~~~~~~~l~~~~~--~~~~~~~~v~~w~pq~~---iL~~~~ 180 (299)
++.+|+.. +.+.+..+++++.... .+++++-.... ...+...+. ....+++.+.+++|+.. .+..++
T Consensus 196 i~~~G~~~--~~Kg~~~li~a~~~l~~~~~l~ivG~~~~----~~~~~~~~~~~~~~~~~V~~~g~~~~~~~~~~~~~ad 269 (363)
T cd04955 196 YLLVGRIV--PENNIDDLIEAFSKSNSGKKLVIVGNADH----NTPYGKLLKEKAAADPRIIFVGPIYDQELLELLRYAA 269 (363)
T ss_pred EEEEeccc--ccCCHHHHHHHHHhhccCceEEEEcCCCC----cchHHHHHHHHhCCCCcEEEccccChHHHHHHHHhCC
Confidence 34578774 2334555666666543 55444332211 011111111 12347888999999875 566666
Q ss_pred cCceeeccC-----chhhhhhhhcCcCeeeccCCcChHhHHHHHHHHhCcEEEecCCCCHHHHHHHHHHHhcCC
Q 022329 181 VGAFLTHCG-----WNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVKRGDIEALVKEMMDGD 249 (299)
Q Consensus 181 v~~~ItHgG-----~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~i~~av~~vl~~~ 249 (299)
+ ++.+.- .++++||+++|+|+|+....+ +...+ +. .|..+.. .+.+.+++.++++++
T Consensus 270 ~--~v~ps~~~e~~~~~~~EAma~G~PvI~s~~~~----~~e~~-~~--~g~~~~~---~~~l~~~i~~l~~~~ 331 (363)
T cd04955 270 L--FYLHGHSVGGTNPSLLEAMAYGCPVLASDNPF----NREVL-GD--KAIYFKV---GDDLASLLEELEADP 331 (363)
T ss_pred E--EEeCCccCCCCChHHHHHHHcCCCEEEecCCc----cceee-cC--CeeEecC---chHHHHHHHHHHhCH
Confidence 6 544432 247999999999999976542 22223 32 3444431 222999999999875
No 104
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=96.33 E-value=0.23 Score=46.80 Aligned_cols=201 Identities=13% Similarity=0.119 Sum_probs=114.2
Q ss_pred cCccEEEEcCcccccHHHHHHHHhcC-CcEEEeCCccCcchhhhhhhhhcCCCCCccccchhHHhhccCCCCceEEEEeC
Q 022329 34 FKSSAIIFNTFDEFEHEALEVIASKF-PNIYTVGPLPLLCKQVVEAKFRSFGSSLWKEDTDCLKWLDKRDANSVVYVNYG 112 (299)
Q Consensus 34 ~~~~~~l~ns~~~le~~~~~~~r~~~-p~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~vvyvs~G 112 (299)
.+.|+++..|- .+.. -++.+. ++|.-.|=+-......+ ..-..-+.+...++.. +++ .|.-+
T Consensus 176 ~~i~li~aQse--~D~~---Rf~~LGa~~v~v~GNlKfd~~~~~---------~~~~~~~~~r~~l~~~--r~v-~iaaS 238 (419)
T COG1519 176 KNIDLILAQSE--EDAQ---RFRSLGAKPVVVTGNLKFDIEPPP---------QLAAELAALRRQLGGH--RPV-WVAAS 238 (419)
T ss_pred HhcceeeecCH--HHHH---HHHhcCCcceEEecceeecCCCCh---------hhHHHHHHHHHhcCCC--Cce-EEEec
Confidence 56688888882 2222 223433 46788887654322110 0000111222333331 444 34444
Q ss_pred CccccCHHHHHHHHHHHHcC--CCCEEEEEcCCCCCCCCCCCChhhhhhh------------------cCCeEEeeccch
Q 022329 113 SITVMTEQHLTEFAWGLANS--KRPFLWILRPDVVMGDSVVLPDEYFEEI------------------KDRGFIVSWCNQ 172 (299)
Q Consensus 113 S~~~~~~~~~~~i~~al~~~--~~~~lw~~~~~~~~~~~~~l~~~~~~~~------------------~~~~~v~~w~pq 172 (299)
| -....+.+.....+|.+. +.-.||+=+.... + +...+-. ..++++.+-+--
T Consensus 239 T-H~GEeei~l~~~~~l~~~~~~~llIlVPRHpER------f-~~v~~l~~~~gl~~~~rS~~~~~~~~tdV~l~DtmGE 310 (419)
T COG1519 239 T-HEGEEEIILDAHQALKKQFPNLLLILVPRHPER------F-KAVENLLKRKGLSVTRRSQGDPPFSDTDVLLGDTMGE 310 (419)
T ss_pred C-CCchHHHHHHHHHHHHhhCCCceEEEecCChhh------H-HHHHHHHHHcCCeEEeecCCCCCCCCCcEEEEecHhH
Confidence 4 334556666666676553 3566776553311 0 0111111 124555554443
Q ss_pred hh-hhcCCCc---C-ceeeccCchhhhhhhhcCcCeeeccCCcChHhHHHHHHHHhCcEEEecCCCCHHHHHHHHHHHhc
Q 022329 173 EQ-VLSHPSV---G-AFLTHCGWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVKRGDIEALVKEMMD 247 (299)
Q Consensus 173 ~~-iL~~~~v---~-~~ItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~i~~av~~vl~ 247 (299)
.- +++-+++ | -|+.+||+| .+|++++|+|+|.=|...-|..-++++ ...|.|+.++ +.+.+.+++..+++
T Consensus 311 L~l~y~~adiAFVGGSlv~~GGHN-~LEpa~~~~pvi~Gp~~~Nf~ei~~~l-~~~ga~~~v~---~~~~l~~~v~~l~~ 385 (419)
T COG1519 311 LGLLYGIADIAFVGGSLVPIGGHN-PLEPAAFGTPVIFGPYTFNFSDIAERL-LQAGAGLQVE---DADLLAKAVELLLA 385 (419)
T ss_pred HHHHHhhccEEEECCcccCCCCCC-hhhHHHcCCCEEeCCccccHHHHHHHH-HhcCCeEEEC---CHHHHHHHHHHhcC
Confidence 33 2333332 1 146689987 789999999999999999999999999 8999999998 58889999988888
Q ss_pred CCh-hHHHHHHHHHHHHH
Q 022329 248 GDE-GKKMRQKAWEWKKK 264 (299)
Q Consensus 248 ~~~-~~~~r~~a~~l~~~ 264 (299)
|++ ...|.+++.++-..
T Consensus 386 ~~~~r~~~~~~~~~~v~~ 403 (419)
T COG1519 386 DEDKREAYGRAGLEFLAQ 403 (419)
T ss_pred CHHHHHHHHHHHHHHHHH
Confidence 652 22444555444443
No 105
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=96.29 E-value=0.36 Score=45.97 Aligned_cols=79 Identities=14% Similarity=0.078 Sum_probs=56.7
Q ss_pred cCCeEEeeccchhh---hhcCCCcCceee-----ccCchhhhhhhhcCcCeeeccCCcChHhHHHHHHH---HhCcEEEe
Q 022329 161 KDRGFIVSWCNQEQ---VLSHPSVGAFLT-----HCGWNSTMESICGGVPVICWPFFAEQQTNCRYACT---TWGIGMEV 229 (299)
Q Consensus 161 ~~~~~v~~w~pq~~---iL~~~~v~~~It-----HgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~---~~g~G~~l 229 (299)
.+++.+.+++|+.+ +|..+++ +|+ |- ..++.||+++|+|+|+.-..+.- ...+ + .-+.|...
T Consensus 304 ~~~V~f~g~v~~~~l~~~l~~adv--~v~~s~~E~F-gi~~lEAMa~G~pvIa~~~ggp~---~~iv-~~~~~g~~G~l~ 376 (419)
T cd03806 304 EDKVEFVVNAPFEELLEELSTASI--GLHTMWNEHF-GIGVVEYMAAGLIPLAHASGGPL---LDIV-VPWDGGPTGFLA 376 (419)
T ss_pred CCeEEEecCCCHHHHHHHHHhCeE--EEECCccCCc-ccHHHHHHHcCCcEEEEcCCCCc---hhee-eccCCCCceEEe
Confidence 46888999998765 7878887 443 23 34889999999999987654321 1112 3 34577765
Q ss_pred cCCCCHHHHHHHHHHHhcCC
Q 022329 230 NHDVKRGDIEALVKEMMDGD 249 (299)
Q Consensus 230 ~~~~~~~~i~~av~~vl~~~ 249 (299)
. +.+++.+++.++++++
T Consensus 377 ~---d~~~la~ai~~ll~~~ 393 (419)
T cd03806 377 S---TAEEYAEAIEKILSLS 393 (419)
T ss_pred C---CHHHHHHHHHHHHhCC
Confidence 3 8999999999999865
No 106
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=96.07 E-value=0.17 Score=53.25 Aligned_cols=95 Identities=12% Similarity=0.092 Sum_probs=64.2
Q ss_pred cCCeEEeeccchhh---hhcCCC--cCceeec----cCchhhhhhhhcCcCeeeccCCcChHhHHHHHHHHhCcEEEecC
Q 022329 161 KDRGFIVSWCNQEQ---VLSHPS--VGAFLTH----CGWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNH 231 (299)
Q Consensus 161 ~~~~~v~~w~pq~~---iL~~~~--v~~~ItH----gG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~ 231 (299)
.+++.+.+++++.+ ++..++ .++||.- +=..+++||+++|+|+|+....+ ....+ +.-..|+.++
T Consensus 547 ~g~V~FlG~v~~edvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAcGlPVVASdvGG----~~EII-~~g~nGlLVd- 620 (1050)
T TIGR02468 547 YGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPMVATKNGG----PVDIH-RVLDNGLLVD- 620 (1050)
T ss_pred CCeEEecCCCCHHHHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHhCCCEEEeCCCC----cHHHh-ccCCcEEEEC-
Confidence 46777888888765 454442 2236653 22468999999999999987643 22233 4445788776
Q ss_pred CCCHHHHHHHHHHHhcCCh-hHHHHHHHHHH
Q 022329 232 DVKRGDIEALVKEMMDGDE-GKKMRQKAWEW 261 (299)
Q Consensus 232 ~~~~~~i~~av~~vl~~~~-~~~~r~~a~~l 261 (299)
.-+.+++.++|.++++|++ .+++.+++++.
T Consensus 621 P~D~eaLA~AL~~LL~Dpelr~~m~~~gr~~ 651 (1050)
T TIGR02468 621 PHDQQAIADALLKLVADKQLWAECRQNGLKN 651 (1050)
T ss_pred CCCHHHHHHHHHHHhhCHHHHHHHHHHHHHH
Confidence 4689999999999998763 34555555544
No 107
>COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]
Probab=95.98 E-value=0.14 Score=49.81 Aligned_cols=136 Identities=18% Similarity=0.163 Sum_probs=87.3
Q ss_pred CCCceEEEEeCCccccCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCCCCChhhhhhh---cCCeEEeeccchhh---h
Q 022329 102 DANSVVYVNYGSITVMTEQHLTEFAWGLANSKRPFLWILRPDVVMGDSVVLPDEYFEEI---KDRGFIVSWCNQEQ---V 175 (299)
Q Consensus 102 ~~~~vvyvs~GS~~~~~~~~~~~i~~al~~~~~~~lw~~~~~~~~~~~~~l~~~~~~~~---~~~~~v~~w~pq~~---i 175 (299)
+++-+||+||+......++.+..=++-|+..+..++|....+...+...-+ .+..++. +.+.++.+=.|... =
T Consensus 427 p~~avVf~c~~n~~K~~pev~~~wmqIL~~vP~Svl~L~~~~~~~~~~~~l-~~la~~~Gv~~eRL~f~p~~~~~~h~a~ 505 (620)
T COG3914 427 PEDAVVFCCFNNYFKITPEVFALWMQILSAVPNSVLLLKAGGDDAEINARL-RDLAEREGVDSERLRFLPPAPNEDHRAR 505 (620)
T ss_pred CCCeEEEEecCCcccCCHHHHHHHHHHHHhCCCcEEEEecCCCcHHHHHHH-HHHHHHcCCChhheeecCCCCCHHHHHh
Confidence 356799999999999999999998999999999999998864110000000 0111111 24555555555443 2
Q ss_pred hcCCCcCcee---eccCchhhhhhhhcCcCeeeccCCcChHh--HHHHHHHHhCcEEEecCCCCHHHHHHHHH
Q 022329 176 LSHPSVGAFL---THCGWNSTMESICGGVPVICWPFFAEQQT--NCRYACTTWGIGMEVNHDVKRGDIEALVK 243 (299)
Q Consensus 176 L~~~~v~~~I---tHgG~~s~~Eal~~GvP~i~~P~~~DQ~~--na~~v~~~~g~G~~l~~~~~~~~i~~av~ 243 (299)
++-+++ |+ --||+.|..|+++.|||+|.++ ++||. |+..++...|+-..+- .-..+=++++|+
T Consensus 506 ~~iADl--vLDTyPY~g~TTa~daLwm~vPVlT~~--G~~FasR~~~si~~~agi~e~vA-~s~~dYV~~av~ 573 (620)
T COG3914 506 YGIADL--VLDTYPYGGHTTASDALWMGVPVLTRV--GEQFASRNGASIATNAGIPELVA-DSRADYVEKAVA 573 (620)
T ss_pred hchhhe--eeecccCCCccchHHHHHhcCceeeec--cHHHHHhhhHHHHHhcCCchhhc-CCHHHHHHHHHH
Confidence 333444 64 4699999999999999999875 67775 5555546667665554 223344555553
No 108
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=95.91 E-value=0.36 Score=49.03 Aligned_cols=94 Identities=19% Similarity=0.205 Sum_probs=63.6
Q ss_pred cCCeEEeeccchhh-hhcCCCcCceee---ccC-chhhhhhhhcCcCeeeccCCcChHhHHHHHHHHhCcEEEecC-CCC
Q 022329 161 KDRGFIVSWCNQEQ-VLSHPSVGAFLT---HCG-WNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNH-DVK 234 (299)
Q Consensus 161 ~~~~~v~~w~pq~~-iL~~~~v~~~It---HgG-~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~-~~~ 234 (299)
.+++.+.+|.++.. +|..+++ ||. +.| .++++||+++|+|+|+....+ ....+ +.-..|+.+.. +.+
T Consensus 573 ~~~V~flG~~~dv~~ll~aaDv--~VlpS~~Egfp~vlLEAMA~G~PVVat~~gG----~~EiV-~dg~~GlLv~~~d~~ 645 (694)
T PRK15179 573 GERILFTGLSRRVGYWLTQFNA--FLLLSRFEGLPNVLIEAQFSGVPVVTTLAGG----AGEAV-QEGVTGLTLPADTVT 645 (694)
T ss_pred CCcEEEcCCcchHHHHHHhcCE--EEeccccccchHHHHHHHHcCCeEEEECCCC----hHHHc-cCCCCEEEeCCCCCC
Confidence 47788889887554 7888887 553 344 568999999999999987632 34445 55457888865 566
Q ss_pred HHHHHHHHHHHhcCCh-hHHHHHHHHHH
Q 022329 235 RGDIEALVKEMMDGDE-GKKMRQKAWEW 261 (299)
Q Consensus 235 ~~~i~~av~~vl~~~~-~~~~r~~a~~l 261 (299)
.+++.+++.+++.+.. ...+++++++.
T Consensus 646 ~~~La~aL~~ll~~l~~~~~l~~~ar~~ 673 (694)
T PRK15179 646 APDVAEALARIHDMCAADPGIARKAADW 673 (694)
T ss_pred hHHHHHHHHHHHhChhccHHHHHHHHHH
Confidence 7788888877765321 12555555443
No 109
>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=95.90 E-value=0.52 Score=46.74 Aligned_cols=193 Identities=14% Similarity=0.105 Sum_probs=97.3
Q ss_pred cccccHHHHHHHHhcCCcEEEeC-CccCcchhhhhhhhhcCCCCCccccchhHHhhccCCCCceEEEEeCCccccCHHHH
Q 022329 44 FDEFEHEALEVIASKFPNIYTVG-PLPLLCKQVVEAKFRSFGSSLWKEDTDCLKWLDKRDANSVVYVNYGSITVMTEQHL 122 (299)
Q Consensus 44 ~~~le~~~~~~~r~~~p~v~~VG-pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~vvyvs~GS~~~~~~~~~ 122 (299)
..-+|.+++ +...-++.||| |+....+.. .+..+..+-+.-.+++++|-+--||-..--...+
T Consensus 368 IfPFE~~~y---~~~gv~v~yVGHPL~d~i~~~-------------~~~~~~r~~lgl~~~~~iIaLLPGSR~~EI~rll 431 (608)
T PRK01021 368 ILPFEQNLF---KDSPLRTVYLGHPLVETISSF-------------SPNLSWKEQLHLPSDKPIVAAFPGSRRGDILRNL 431 (608)
T ss_pred cCccCHHHH---HhcCCCeEEECCcHHhhcccC-------------CCHHHHHHHcCCCCCCCEEEEECCCCHHHHHHHH
Confidence 345677644 55556899999 665321100 0111122223333466889999999843223334
Q ss_pred HHHHHHHH--cC--CCCEEEEEcCCCCCCCCCCCChhhhhhhcC----CeEEeeccchhhhhcCCCcCceeeccCchhhh
Q 022329 123 TEFAWGLA--NS--KRPFLWILRPDVVMGDSVVLPDEYFEEIKD----RGFIVSWCNQEQVLSHPSVGAFLTHCGWNSTM 194 (299)
Q Consensus 123 ~~i~~al~--~~--~~~~lw~~~~~~~~~~~~~l~~~~~~~~~~----~~~v~~w~pq~~iL~~~~v~~~ItHgG~~s~~ 194 (299)
..++++.+ .. +.+|+....+. ...+.+.+...+ .+.+..--...++++.+++ .+.-.|. .++
T Consensus 432 Pv~l~aa~~~~l~~~l~fvvp~a~~-------~~~~~i~~~~~~~~~~~~~ii~~~~~~~~m~aaD~--aLaaSGT-aTL 501 (608)
T PRK01021 432 TIQVQAFLASSLASTHQLLVSSANP-------KYDHLILEVLQQEGCLHSHIVPSQFRYELMRECDC--ALAKCGT-IVL 501 (608)
T ss_pred HHHHHHHHHHHhccCeEEEEecCch-------hhHHHHHHHHhhcCCCCeEEecCcchHHHHHhcCe--eeecCCH-HHH
Confidence 44555544 22 34555432211 011112221211 1222210012468888887 7777776 568
Q ss_pred hhhhcCcCeeeccCCc-ChHhHHHHHHHH--------------hCcEEEec---CCCCHHHHHHHHHHHhcCCh-hHHHH
Q 022329 195 ESICGGVPVICWPFFA-EQQTNCRYACTT--------------WGIGMEVN---HDVKRGDIEALVKEMMDGDE-GKKMR 255 (299)
Q Consensus 195 Eal~~GvP~i~~P~~~-DQ~~na~~v~~~--------------~g~G~~l~---~~~~~~~i~~av~~vl~~~~-~~~~r 255 (299)
|+..+|+|||++=-.. =-+.-++++ .+ ..+--++- .+++++.|.+++ ++|.|++ .++++
T Consensus 502 EaAL~g~PmVV~YK~s~Lty~Iak~L-vki~i~yIsLpNIIagr~VvPEllqgQ~~~tpe~La~~l-~lL~d~~~r~~~~ 579 (608)
T PRK01021 502 ETALNQTPTIVTCQLRPFDTFLAKYI-FKIILPAYSLPNIILGSTIFPEFIGGKKDFQPEEVAAAL-DILKTSQSKEKQK 579 (608)
T ss_pred HHHHhCCCEEEEEecCHHHHHHHHHH-HhccCCeeehhHHhcCCCcchhhcCCcccCCHHHHHHHH-HHhcCHHHHHHHH
Confidence 9999999999853221 112234554 22 11111111 257899999997 7787762 23444
Q ss_pred HHHHHHHHH
Q 022329 256 QKAWEWKKK 264 (299)
Q Consensus 256 ~~a~~l~~~ 264 (299)
+..+++.+.
T Consensus 580 ~~l~~lr~~ 588 (608)
T PRK01021 580 DACRDLYQA 588 (608)
T ss_pred HHHHHHHHH
Confidence 444444444
No 110
>PF06722 DUF1205: Protein of unknown function (DUF1205); InterPro: IPR010610 This entry represents a conserved region of unknown function within bacterial glycosyl transferases. Many proteins containing this domain are members of the glycosyl transferase family 28 IPR004276 from INTERPRO.; PDB: 3OTH_A 3OTG_A 3OTI_A 3D0R_A 3D0Q_B 2P6P_A 3UYK_A 3UYL_B 3TSA_B 2YJN_A.
Probab=95.86 E-value=0.01 Score=44.69 Aligned_cols=51 Identities=20% Similarity=0.175 Sum_probs=42.6
Q ss_pred hhHHhhccCCCCceEEEEeCCcccc---CH--HHHHHHHHHHHcCCCCEEEEEcCC
Q 022329 93 DCLKWLDKRDANSVVYVNYGSITVM---TE--QHLTEFAWGLANSKRPFLWILRPD 143 (299)
Q Consensus 93 ~~~~wl~~~~~~~vvyvs~GS~~~~---~~--~~~~~i~~al~~~~~~~lw~~~~~ 143 (299)
.+..|+-..+.++.|++|+||.... .. ..+..++++++..+..++..+...
T Consensus 29 ~~P~Wl~~~~~RpRVcvT~G~~~~~~~g~~~~~~l~~ll~ala~ldvEvV~a~~~~ 84 (97)
T PF06722_consen 29 VVPDWLLEPPGRPRVCVTLGTSVRMFFGPGGVPLLRRLLEALAGLDVEVVVALPAA 84 (97)
T ss_dssp EEEGGGSSSTSSEEEEEEETHHHCHHHSCHHHCHHHHHHHHHHTSSSEEEEEETTC
T ss_pred CCCcccccCCCCCEEEEEcCCCccccccccchHHHHHHHHHHhhCCcEEEEECCHH
Confidence 4567999988999999999998532 22 478999999999999999998854
No 111
>PHA01633 putative glycosyl transferase group 1
Probab=95.67 E-value=0.49 Score=43.79 Aligned_cols=86 Identities=14% Similarity=0.123 Sum_probs=56.8
Q ss_pred hcCCeEEe---eccchh---hhhcCCCcCceeec---cC-chhhhhhhhcCcCeeeccC------CcCh------HhHHH
Q 022329 160 IKDRGFIV---SWCNQE---QVLSHPSVGAFLTH---CG-WNSTMESICGGVPVICWPF------FAEQ------QTNCR 217 (299)
Q Consensus 160 ~~~~~~v~---~w~pq~---~iL~~~~v~~~ItH---gG-~~s~~Eal~~GvP~i~~P~------~~DQ------~~na~ 217 (299)
+++++.+. ++.++. .+++.+++ |+.- =| ..+++||+++|+|+|+.-. .+|+ ..+..
T Consensus 199 l~~~V~f~g~~G~~~~~dl~~~y~~aDi--fV~PS~~EgfGlvlLEAMA~G~PVVas~~~~l~Ei~g~~~~~Li~~~~v~ 276 (335)
T PHA01633 199 VPANVHFVAEFGHNSREYIFAFYGAMDF--TIVPSGTEGFGMPVLESMAMGTPVIHQLMPPLDEFTSWQWNLLIKSSKVE 276 (335)
T ss_pred CCCcEEEEecCCCCCHHHHHHHHHhCCE--EEECCccccCCHHHHHHHHcCCCEEEccCCCceeecCCccceeeCCCCHH
Confidence 45678877 444544 47778887 6642 23 4578999999999998733 2333 22332
Q ss_pred HHHH-HhCcEEEecCCCCHHHHHHHHHHHhcC
Q 022329 218 YACT-TWGIGMEVNHDVKRGDIEALVKEMMDG 248 (299)
Q Consensus 218 ~v~~-~~g~G~~l~~~~~~~~i~~av~~vl~~ 248 (299)
..+. ..|.|..++ ..+++++.+++.+++..
T Consensus 277 ~~~~~~~g~g~~~~-~~d~~~la~ai~~~~~~ 307 (335)
T PHA01633 277 EYYDKEHGQKWKIH-KFQIEDMANAIILAFEL 307 (335)
T ss_pred HhcCcccCceeeec-CCCHHHHHHHHHHHHhc
Confidence 2211 346777765 57999999999998553
No 112
>PLN02275 transferase, transferring glycosyl groups
Probab=95.56 E-value=0.13 Score=47.96 Aligned_cols=75 Identities=12% Similarity=0.184 Sum_probs=53.5
Q ss_pred CCeEEe-eccchhh---hhcCCCcCceee-c-----cC-chhhhhhhhcCcCeeeccCCcChHhHHHHHHHHhCcEEEec
Q 022329 162 DRGFIV-SWCNQEQ---VLSHPSVGAFLT-H-----CG-WNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVN 230 (299)
Q Consensus 162 ~~~~v~-~w~pq~~---iL~~~~v~~~It-H-----gG-~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~ 230 (299)
+|+.+. .|+|..+ +|+.+++ ||. + -| -++++||+++|+|+|+.... .+...+ ++-+.|..+.
T Consensus 286 ~~v~~~~~~~~~~~~~~~l~~aDv--~v~~~~s~~~e~~p~~llEAmA~G~PVVa~~~g----g~~eiv-~~g~~G~lv~ 358 (371)
T PLN02275 286 RHVAFRTMWLEAEDYPLLLGSADL--GVSLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS----CIGELV-KDGKNGLLFS 358 (371)
T ss_pred CceEEEcCCCCHHHHHHHHHhCCE--EEEeccccccccccHHHHHHHHCCCCEEEecCC----ChHHHc-cCCCCeEEEC
Confidence 455654 4788765 5888888 663 1 12 35799999999999997542 255555 6667899886
Q ss_pred CCCCHHHHHHHHHHHh
Q 022329 231 HDVKRGDIEALVKEMM 246 (299)
Q Consensus 231 ~~~~~~~i~~av~~vl 246 (299)
+.+++.+++.+++
T Consensus 359 ---~~~~la~~i~~l~ 371 (371)
T PLN02275 359 ---SSSELADQLLELL 371 (371)
T ss_pred ---CHHHHHHHHHHhC
Confidence 5888988888764
No 113
>PRK10017 colanic acid biosynthesis protein; Provisional
Probab=95.29 E-value=0.85 Score=43.68 Aligned_cols=160 Identities=12% Similarity=0.189 Sum_probs=87.8
Q ss_pred HhhccCCCCceEEEEeCCcccc------C-H---HHHHHHHHHHHcCCCCEEEEEcCCCCCC--CCC-CCChhhhhhhc-
Q 022329 96 KWLDKRDANSVVYVNYGSITVM------T-E---QHLTEFAWGLANSKRPFLWILRPDVVMG--DSV-VLPDEYFEEIK- 161 (299)
Q Consensus 96 ~wl~~~~~~~vvyvs~GS~~~~------~-~---~~~~~i~~al~~~~~~~lw~~~~~~~~~--~~~-~l~~~~~~~~~- 161 (299)
.|+...+.+++|-|+....... . . +.+..+++.|.+.|+++++.--...... ... .....+.+.++
T Consensus 226 ~~~~~~~~~~~Vgisvr~~~~~~~~~~~~~~~Y~~~la~~i~~Li~~g~~Vv~lp~~~~~~~~~~dD~~~~~~l~~~~~~ 305 (426)
T PRK10017 226 HWLDVAAQQKTVAITLRELAPFDKRLGTTQQAYEKAFAGVVNRIIDEGYQVIALSTCTGIDSYNKDDRMVALNLRQHVSD 305 (426)
T ss_pred hhhcccccCCEEEEEecccccccccccccHHHHHHHHHHHHHHHHHCCCeEEEEecccCccCCCCchHHHHHHHHHhccc
Confidence 3444333456787876544211 1 1 2344455555556888886643210000 000 00112222332
Q ss_pred -CCeEE-e-eccchh--hhhcCCCcCceeeccCchhhhhhhhcCcCeeeccCCcChHhHHHHHHHHhCcEEE-ecC-CCC
Q 022329 162 -DRGFI-V-SWCNQE--QVLSHPSVGAFLTHCGWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGME-VNH-DVK 234 (299)
Q Consensus 162 -~~~~v-~-~w~pq~--~iL~~~~v~~~ItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~-l~~-~~~ 234 (299)
.+..+ . .+-|.. .+++++++ +|..= ..++.-|+.+|||++++++ |.-... .+ +.+|.... ++. +++
T Consensus 306 ~~~~~vi~~~~~~~e~~~iIs~~dl--~ig~R-lHa~I~a~~~gvP~i~i~Y--~~K~~~-~~-~~lg~~~~~~~~~~l~ 378 (426)
T PRK10017 306 PARYHVVMDELNDLEMGKILGACEL--TVGTR-LHSAIISMNFGTPAIAINY--EHKSAG-IM-QQLGLPEMAIDIRHLL 378 (426)
T ss_pred ccceeEecCCCChHHHHHHHhhCCE--EEEec-chHHHHHHHcCCCEEEeee--hHHHHH-HH-HHcCCccEEechhhCC
Confidence 23333 2 233443 57878776 77653 3456678999999999998 433333 34 67787755 333 688
Q ss_pred HHHHHHHHHHHhcCChhHHHHHHHHHHHHH
Q 022329 235 RGDIEALVKEMMDGDEGKKMRQKAWEWKKK 264 (299)
Q Consensus 235 ~~~i~~av~~vl~~~~~~~~r~~a~~l~~~ 264 (299)
.+++.+.+.+++++.+ .+++..++--+.
T Consensus 379 ~~~Li~~v~~~~~~r~--~~~~~l~~~v~~ 406 (426)
T PRK10017 379 DGSLQAMVADTLGQLP--ALNARLAEAVSR 406 (426)
T ss_pred HHHHHHHHHHHHhCHH--HHHHHHHHHHHH
Confidence 8999999999998753 444444333333
No 114
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1
Probab=95.28 E-value=0.17 Score=36.98 Aligned_cols=54 Identities=13% Similarity=0.114 Sum_probs=39.5
Q ss_pred ccCchhhhhhhhcCcCeeeccCCcChHhHHHHHHHHhC-cEEEecCCCCHHHHHHHHHHHhcCC
Q 022329 187 HCGWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWG-IGMEVNHDVKRGDIEALVKEMMDGD 249 (299)
Q Consensus 187 HgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g-~G~~l~~~~~~~~i~~av~~vl~~~ 249 (299)
+|-..-+.|++++|+|+|+-+. ......+ +. | -++..+ +.+++.+++..+++|+
T Consensus 9 ~~~~~r~~E~~a~G~~vi~~~~----~~~~~~~-~~-~~~~~~~~---~~~el~~~i~~ll~~~ 63 (92)
T PF13524_consen 9 DGPNMRIFEAMACGTPVISDDS----PGLREIF-ED-GEHIITYN---DPEELAEKIEYLLENP 63 (92)
T ss_pred CCCchHHHHHHHCCCeEEECCh----HHHHHHc-CC-CCeEEEEC---CHHHHHHHHHHHHCCH
Confidence 4556689999999999999876 2333333 22 4 344443 9999999999999987
No 115
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=95.27 E-value=0.82 Score=44.12 Aligned_cols=131 Identities=11% Similarity=-0.001 Sum_probs=72.5
Q ss_pred eEEEEeCCccc-cCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCCCCChhhhhhhcCCeEEeeccchh---hhhcCCCc
Q 022329 106 VVYVNYGSITV-MTEQHLTEFAWGLANSKRPFLWILRPDVVMGDSVVLPDEYFEEIKDRGFIVSWCNQE---QVLSHPSV 181 (299)
Q Consensus 106 vvyvs~GS~~~-~~~~~~~~i~~al~~~~~~~lw~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~w~pq~---~iL~~~~v 181 (299)
.+++..|.... ...+.+.+.+..+.+.+.++++.-.+... ....+ ..+..+.+.++.+....+.. .+++.+++
T Consensus 292 ~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~lvi~G~g~~~--~~~~l-~~~~~~~~~~v~~~~~~~~~~~~~~~~~aDv 368 (473)
T TIGR02095 292 PLFGVISRLTQQKGVDLLLAALPELLELGGQLVVLGTGDPE--LEEAL-RELAERYPGNVRVIIGYDEALAHLIYAGADF 368 (473)
T ss_pred CEEEEEecCccccChHHHHHHHHHHHHcCcEEEEECCCCHH--HHHHH-HHHHHHCCCcEEEEEcCCHHHHHHHHHhCCE
Confidence 45556677742 22333333333333345666554332100 00000 11222335566665555554 37777887
Q ss_pred Cceeec---cCc-hhhhhhhhcCcCeeeccCCcChHhHHHHHHHHh------CcEEEecCCCCHHHHHHHHHHHhc
Q 022329 182 GAFLTH---CGW-NSTMESICGGVPVICWPFFAEQQTNCRYACTTW------GIGMEVNHDVKRGDIEALVKEMMD 247 (299)
Q Consensus 182 ~~~ItH---gG~-~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~------g~G~~l~~~~~~~~i~~av~~vl~ 247 (299)
|+.- -|. .+++||+++|+|.|+....+ ....+ ... +.|..+. .-+.+++.++|.+++.
T Consensus 369 --~l~pS~~E~~gl~~lEAma~G~pvI~s~~gg----~~e~v-~~~~~~~~~~~G~l~~-~~d~~~la~~i~~~l~ 436 (473)
T TIGR02095 369 --ILMPSRFEPCGLTQLYAMRYGTVPIVRRTGG----LADTV-VDGDPEAESGTGFLFE-EYDPGALLAALSRALR 436 (473)
T ss_pred --EEeCCCcCCcHHHHHHHHHCCCCeEEccCCC----ccceE-ecCCCCCCCCceEEeC-CCCHHHHHHHHHHHHH
Confidence 5532 233 37899999999999876642 11122 232 7788876 4688999999999886
No 116
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=95.27 E-value=0.8 Score=45.23 Aligned_cols=74 Identities=20% Similarity=0.180 Sum_probs=51.1
Q ss_pred cCCeEEeeccchh-hhhcCCCcCceeec---cC-chhhhhhhhcCcCeeeccCCcChHhHHHHHHHHhCcEEEecCCCCH
Q 022329 161 KDRGFIVSWCNQE-QVLSHPSVGAFLTH---CG-WNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVKR 235 (299)
Q Consensus 161 ~~~~~v~~w~pq~-~iL~~~~v~~~ItH---gG-~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~ 235 (299)
.+++.+.+|..+. .+|..+++ ||.. -| .++++||+++|+|+|+.... .+...+ .+-..|..+.. -+.
T Consensus 454 ~d~V~FlG~~~Dv~~~LaaADV--fVlPS~~EGfp~vlLEAMA~GlPVVATdvG----G~~EiV-~dG~nG~LVp~-~D~ 525 (578)
T PRK15490 454 LERILFVGASRDVGYWLQKMNV--FILFSRYEGLPNVLIEAQMVGVPVISTPAG----GSAECF-IEGVSGFILDD-AQT 525 (578)
T ss_pred CCcEEECCChhhHHHHHHhCCE--EEEcccccCccHHHHHHHHhCCCEEEeCCC----CcHHHc-ccCCcEEEECC-CCh
Confidence 4678888886544 37888888 7642 34 66999999999999988763 345555 56578888864 344
Q ss_pred HHHHHHH
Q 022329 236 GDIEALV 242 (299)
Q Consensus 236 ~~i~~av 242 (299)
+.+.+++
T Consensus 526 ~aLa~ai 532 (578)
T PRK15490 526 VNLDQAC 532 (578)
T ss_pred hhHHHHH
Confidence 4555444
No 117
>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length. They are found in archaea and some bacteria and have no known function.
Probab=95.16 E-value=0.74 Score=42.61 Aligned_cols=138 Identities=19% Similarity=0.162 Sum_probs=80.2
Q ss_pred ccchhHHhhccCCCCceEEEEeCCc----cccCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCCCCChhhhhhhcCCeE
Q 022329 90 EDTDCLKWLDKRDANSVVYVNYGSI----TVMTEQHLTEFAWGLANSKRPFLWILRPDVVMGDSVVLPDEYFEEIKDRGF 165 (299)
Q Consensus 90 ~~~~~~~wl~~~~~~~vvyvs~GS~----~~~~~~~~~~i~~al~~~~~~~lw~~~~~~~~~~~~~l~~~~~~~~~~~~~ 165 (299)
.|.+..+-+... +.+.|++-+-+. .......+..+++.|++.+..++..-+... .. ...++. ++.
T Consensus 166 Pd~~vl~~lg~~-~~~yIvvR~~~~~A~y~~~~~~i~~~ii~~L~~~~~~vV~ipr~~~-------~~-~~~~~~--~~~ 234 (335)
T PF04007_consen 166 PDPEVLKELGLD-DEPYIVVRPEAWKASYDNGKKSILPEIIEELEKYGRNVVIIPRYED-------QR-ELFEKY--GVI 234 (335)
T ss_pred CChhHHHHcCCC-CCCEEEEEeccccCeeecCccchHHHHHHHHHhhCceEEEecCCcc-------hh-hHHhcc--Ccc
Confidence 343444445432 567888877774 223446677889999988876544433221 11 111111 122
Q ss_pred E-eeccchhhhhcCCCcCceeeccCchhhhhhhhcCcCeeeccCCcChHhHHHHHHHHhCcEEEecCCCCHHHHHHHHHH
Q 022329 166 I-VSWCNQEQVLSHPSVGAFLTHCGWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVKRGDIEALVKE 244 (299)
Q Consensus 166 v-~~w~pq~~iL~~~~v~~~ItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~i~~av~~ 244 (299)
+ ..-+.-.++|.++++ ||+=|| ....||..-|+|.|-+ +-++-...-+.+ .+.|.-.. ..+.+++.+.+.+
T Consensus 235 i~~~~vd~~~Ll~~a~l--~Ig~gg-TMa~EAA~LGtPaIs~-~~g~~~~vd~~L-~~~Gll~~---~~~~~ei~~~v~~ 306 (335)
T PF04007_consen 235 IPPEPVDGLDLLYYADL--VIGGGG-TMAREAALLGTPAISC-FPGKLLAVDKYL-IEKGLLYH---STDPDEIVEYVRK 306 (335)
T ss_pred ccCCCCCHHHHHHhcCE--EEeCCc-HHHHHHHHhCCCEEEe-cCCcchhHHHHH-HHCCCeEe---cCCHHHHHHHHHH
Confidence 2 233445579999998 999777 6789999999999974 112211222344 45566333 3477787776665
Q ss_pred Hh
Q 022329 245 MM 246 (299)
Q Consensus 245 vl 246 (299)
.+
T Consensus 307 ~~ 308 (335)
T PF04007_consen 307 NL 308 (335)
T ss_pred hh
Confidence 44
No 118
>PRK14098 glycogen synthase; Provisional
Probab=95.04 E-value=1.1 Score=43.58 Aligned_cols=83 Identities=12% Similarity=0.056 Sum_probs=55.9
Q ss_pred hhcCCeEEeeccchh---hhhcCCCcCceeecc---C-chhhhhhhhcCcCeeeccCCc--ChHhHHHHHHHHhCcEEEe
Q 022329 159 EIKDRGFIVSWCNQE---QVLSHPSVGAFLTHC---G-WNSTMESICGGVPVICWPFFA--EQQTNCRYACTTWGIGMEV 229 (299)
Q Consensus 159 ~~~~~~~v~~w~pq~---~iL~~~~v~~~ItHg---G-~~s~~Eal~~GvP~i~~P~~~--DQ~~na~~v~~~~g~G~~l 229 (299)
+.++++.+..+++.. .+++.+++ |+.-. | ..+.+||+++|+|.|+....+ |...+ .. +.-+.|..+
T Consensus 359 ~~~~~V~~~g~~~~~~~~~~~a~aDi--~l~PS~~E~~Gl~~lEAma~G~ppVv~~~GGl~d~v~~--~~-~~~~~G~l~ 433 (489)
T PRK14098 359 EHPEQVSVQTEFTDAFFHLAIAGLDM--LLMPGKIESCGMLQMFAMSYGTIPVAYAGGGIVETIEE--VS-EDKGSGFIF 433 (489)
T ss_pred HCCCCEEEEEecCHHHHHHHHHhCCE--EEeCCCCCCchHHHHHHHhCCCCeEEecCCCCceeeec--CC-CCCCceeEe
Confidence 346788888888764 47888888 65422 1 237789999999988877543 21111 01 223678777
Q ss_pred cCCCCHHHHHHHHHHHhc
Q 022329 230 NHDVKRGDIEALVKEMMD 247 (299)
Q Consensus 230 ~~~~~~~~i~~av~~vl~ 247 (299)
. ..+.+++.++|.+++.
T Consensus 434 ~-~~d~~~la~ai~~~l~ 450 (489)
T PRK14098 434 H-DYTPEALVAKLGEALA 450 (489)
T ss_pred C-CCCHHHHHHHHHHHHH
Confidence 6 4689999999998763
No 119
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=94.95 E-value=0.81 Score=44.02 Aligned_cols=83 Identities=12% Similarity=0.069 Sum_probs=52.0
Q ss_pred cCCeEEeeccchh---hhhcCCCcCceeec----cCchhhhhhhhcCcCeeeccCCc--ChHhHHHHHHHHhCcEEEecC
Q 022329 161 KDRGFIVSWCNQE---QVLSHPSVGAFLTH----CGWNSTMESICGGVPVICWPFFA--EQQTNCRYACTTWGIGMEVNH 231 (299)
Q Consensus 161 ~~~~~v~~w~pq~---~iL~~~~v~~~ItH----gG~~s~~Eal~~GvP~i~~P~~~--DQ~~na~~v~~~~g~G~~l~~ 231 (299)
++++.+....++. .+++.+++ ++.- +-..+.+||+++|+|+|+....+ |.-.+.... .+.|.|..+.
T Consensus 350 ~~~v~~~~~~~~~~~~~~~~~aDv--~l~pS~~E~~gl~~lEAma~G~pvI~~~~gg~~e~v~~~~~~-~~~~~G~~~~- 425 (476)
T cd03791 350 PGRVAVLIGYDEALAHLIYAGADF--FLMPSRFEPCGLTQMYAMRYGTVPIVRATGGLADTVIDYNED-TGEGTGFVFE- 425 (476)
T ss_pred CCcEEEEEeCCHHHHHHHHHhCCE--EECCCCCCCCcHHHHHHhhCCCCCEECcCCCccceEeCCcCC-CCCCCeEEeC-
Confidence 4677654333433 36777777 5532 11247899999999999876643 211111111 1235788886
Q ss_pred CCCHHHHHHHHHHHhc
Q 022329 232 DVKRGDIEALVKEMMD 247 (299)
Q Consensus 232 ~~~~~~i~~av~~vl~ 247 (299)
.-+.+++.+++.++++
T Consensus 426 ~~~~~~l~~~i~~~l~ 441 (476)
T cd03791 426 GYNADALLAALRRALA 441 (476)
T ss_pred CCCHHHHHHHHHHHHH
Confidence 4578999999999885
No 120
>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing. This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.
Probab=94.87 E-value=0.3 Score=45.70 Aligned_cols=129 Identities=14% Similarity=0.202 Sum_probs=78.4
Q ss_pred CceEEEEeCCcc---ccCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCCCCChhhhhhh--cCCeEEeecc---chhhh
Q 022329 104 NSVVYVNYGSIT---VMTEQHLTEFAWGLANSKRPFLWILRPDVVMGDSVVLPDEYFEEI--KDRGFIVSWC---NQEQV 175 (299)
Q Consensus 104 ~~vvyvs~GS~~---~~~~~~~~~i~~al~~~~~~~lw~~~~~~~~~~~~~l~~~~~~~~--~~~~~v~~w~---pq~~i 175 (299)
++.|+|.+=... ....+.+..++++|.+.+.++++.+..... .. ...-..+.+.. .+++.+.+-+ ....+
T Consensus 201 ~~~vlvt~Hp~~~~~~~~~~~l~~li~~L~~~~~~~~vi~P~~~p-~~-~~i~~~i~~~~~~~~~v~l~~~l~~~~~l~L 278 (365)
T TIGR03568 201 KPYALVTFHPVTLEKESAEEQIKELLKALDELNKNYIFTYPNADA-GS-RIINEAIEEYVNEHPNFRLFKSLGQERYLSL 278 (365)
T ss_pred CCEEEEEeCCCcccccCchHHHHHHHHHHHHhccCCEEEEeCCCC-Cc-hHHHHHHHHHhcCCCCEEEECCCChHHHHHH
Confidence 467777775432 344678999999998877666666532210 00 00001111111 3567777544 44458
Q ss_pred hcCCCcCceeeccCchhhhhhhhcCcCeeeccCCcChHhHHHHHHHHhCcEEE-ecCCCCHHHHHHHHHHHhc
Q 022329 176 LSHPSVGAFLTHCGWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGME-VNHDVKRGDIEALVKEMMD 247 (299)
Q Consensus 176 L~~~~v~~~ItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~-l~~~~~~~~i~~av~~vl~ 247 (299)
+.++++ +||-.+.+- .||.+.|+|.|.+- +.+ .. .+.|..+. + ..+.++|.+++.++++
T Consensus 279 l~~a~~--vitdSSggi-~EA~~lg~Pvv~l~---~R~---e~--~~~g~nvl~v--g~~~~~I~~a~~~~~~ 338 (365)
T TIGR03568 279 LKNADA--VIGNSSSGI-IEAPSFGVPTINIG---TRQ---KG--RLRADSVIDV--DPDKEEIVKAIEKLLD 338 (365)
T ss_pred HHhCCE--EEEcChhHH-HhhhhcCCCEEeec---CCc---hh--hhhcCeEEEe--CCCHHHHHHHHHHHhC
Confidence 888888 998875554 99999999999763 211 11 12243333 3 4689999999999554
No 121
>PLN02501 digalactosyldiacylglycerol synthase
Probab=94.84 E-value=0.8 Score=46.33 Aligned_cols=76 Identities=17% Similarity=0.150 Sum_probs=52.6
Q ss_pred CeEEeeccchh-hhhcCCCcCceeec----cCchhhhhhhhcCcCeeeccCCcChHhHHHHHHHHhCcEEEecCCCCHHH
Q 022329 163 RGFIVSWCNQE-QVLSHPSVGAFLTH----CGWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVKRGD 237 (299)
Q Consensus 163 ~~~v~~w~pq~-~iL~~~~v~~~ItH----gG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~ 237 (299)
++.+.++.+.. .++...++ ||.- |=.++++||+++|+|+|+...-+... + ..-+.|... -+.++
T Consensus 602 ~V~FLG~~dd~~~lyasaDV--FVlPS~sEgFGlVlLEAMA~GlPVVATd~pG~e~-----V-~~g~nGll~---~D~Ea 670 (794)
T PLN02501 602 NLNFLKGRDHADDSLHGYKV--FINPSISDVLCTATAEALAMGKFVVCADHPSNEF-----F-RSFPNCLTY---KTSED 670 (794)
T ss_pred EEEecCCCCCHHHHHHhCCE--EEECCCcccchHHHHHHHHcCCCEEEecCCCCce-----E-eecCCeEec---CCHHH
Confidence 35566676655 48888887 6542 23568899999999999988754321 2 232333332 37999
Q ss_pred HHHHHHHHhcCC
Q 022329 238 IEALVKEMMDGD 249 (299)
Q Consensus 238 i~~av~~vl~~~ 249 (299)
+.++|.++|.++
T Consensus 671 fAeAI~~LLsd~ 682 (794)
T PLN02501 671 FVAKVKEALANE 682 (794)
T ss_pred HHHHHHHHHhCc
Confidence 999999999876
No 122
>PLN02846 digalactosyldiacylglycerol synthase
Probab=93.74 E-value=4 Score=39.53 Aligned_cols=73 Identities=12% Similarity=0.142 Sum_probs=52.5
Q ss_pred EeeccchhhhhcCCCcCceeec----cCchhhhhhhhcCcCeeeccCCcChHhHHHHHHHHhCcEEEecCCCCHHHHHHH
Q 022329 166 IVSWCNQEQVLSHPSVGAFLTH----CGWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVKRGDIEAL 241 (299)
Q Consensus 166 v~~w~pq~~iL~~~~v~~~ItH----gG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~i~~a 241 (299)
+.++.+...++...++ ||.- +=.++++||+++|+|+|+.-.-+ | ..+ ..-+.|.... +.+++.++
T Consensus 288 f~G~~~~~~~~~~~Dv--Fv~pS~~Et~g~v~lEAmA~G~PVVa~~~~~----~-~~v-~~~~ng~~~~---~~~~~a~a 356 (462)
T PLN02846 288 YPGRDHADPLFHDYKV--FLNPSTTDVVCTTTAEALAMGKIVVCANHPS----N-EFF-KQFPNCRTYD---DGKGFVRA 356 (462)
T ss_pred ECCCCCHHHHHHhCCE--EEECCCcccchHHHHHHHHcCCcEEEecCCC----c-cee-ecCCceEecC---CHHHHHHH
Confidence 4566566668888877 7765 33578999999999999987543 2 333 4445555553 78899999
Q ss_pred HHHHhcCC
Q 022329 242 VKEMMDGD 249 (299)
Q Consensus 242 v~~vl~~~ 249 (299)
+.++|.++
T Consensus 357 i~~~l~~~ 364 (462)
T PLN02846 357 TLKALAEE 364 (462)
T ss_pred HHHHHccC
Confidence 99999854
No 123
>PRK00654 glgA glycogen synthase; Provisional
Probab=93.69 E-value=3.9 Score=39.43 Aligned_cols=134 Identities=8% Similarity=0.070 Sum_probs=71.7
Q ss_pred ceEEEEeCCccccCHHHHHHHHHHHH---cCCCCEEEEEcCCCCCCCCCCCChhhhhhhcCCeEE-eeccchh--hhhcC
Q 022329 105 SVVYVNYGSITVMTEQHLTEFAWGLA---NSKRPFLWILRPDVVMGDSVVLPDEYFEEIKDRGFI-VSWCNQE--QVLSH 178 (299)
Q Consensus 105 ~vvyvs~GS~~~~~~~~~~~i~~al~---~~~~~~lw~~~~~~~~~~~~~l~~~~~~~~~~~~~v-~~w~pq~--~iL~~ 178 (299)
..+++..|... +.+.+..+++++. +.+.+++++-.+... ....+ ..+.++.+.++.+ .+|-.+. .+++.
T Consensus 282 ~~~i~~vGRl~--~~KG~~~li~a~~~l~~~~~~lvivG~g~~~--~~~~l-~~l~~~~~~~v~~~~g~~~~~~~~~~~~ 356 (466)
T PRK00654 282 APLFAMVSRLT--EQKGLDLVLEALPELLEQGGQLVLLGTGDPE--LEEAF-RALAARYPGKVGVQIGYDEALAHRIYAG 356 (466)
T ss_pred CcEEEEeeccc--cccChHHHHHHHHHHHhcCCEEEEEecCcHH--HHHHH-HHHHHHCCCcEEEEEeCCHHHHHHHHhh
Confidence 34556667764 2233344444443 336677665332100 00000 1122233556553 4663222 46788
Q ss_pred CCcCceee---ccCc-hhhhhhhhcCcCeeeccCCc--ChHhHHHHHHHHhCcEEEecCCCCHHHHHHHHHHHhc
Q 022329 179 PSVGAFLT---HCGW-NSTMESICGGVPVICWPFFA--EQQTNCRYACTTWGIGMEVNHDVKRGDIEALVKEMMD 247 (299)
Q Consensus 179 ~~v~~~It---HgG~-~s~~Eal~~GvP~i~~P~~~--DQ~~na~~v~~~~g~G~~l~~~~~~~~i~~av~~vl~ 247 (299)
+++ |+. +-|. .+.+||+++|+|.|+....+ |.-.+...- ...+.|..+. .-+.+++.+++.++++
T Consensus 357 aDv--~v~PS~~E~~gl~~lEAma~G~p~V~~~~gG~~e~v~~~~~~-~~~~~G~lv~-~~d~~~la~~i~~~l~ 427 (466)
T PRK00654 357 ADM--FLMPSRFEPCGLTQLYALRYGTLPIVRRTGGLADTVIDYNPE-DGEATGFVFD-DFNAEDLLRALRRALE 427 (466)
T ss_pred CCE--EEeCCCCCCchHHHHHHHHCCCCEEEeCCCCccceeecCCCC-CCCCceEEeC-CCCHHHHHHHHHHHHH
Confidence 887 553 2233 48899999999999876532 211111000 1226788886 4688999999999886
No 124
>PHA01630 putative group 1 glycosyl transferase
Probab=93.11 E-value=4.2 Score=37.48 Aligned_cols=77 Identities=12% Similarity=0.064 Sum_probs=46.5
Q ss_pred ccchhh---hhcCCCcCceeeccC--chhhhhhhhcCcCeeeccCCc--ChHhH---HHHHHHH-----------hCcEE
Q 022329 169 WCNQEQ---VLSHPSVGAFLTHCG--WNSTMESICGGVPVICWPFFA--EQQTN---CRYACTT-----------WGIGM 227 (299)
Q Consensus 169 w~pq~~---iL~~~~v~~~ItHgG--~~s~~Eal~~GvP~i~~P~~~--DQ~~n---a~~v~~~-----------~g~G~ 227 (299)
++|+.. +++.+++-++-++.. ..+++||+++|+|+|+.-..+ |.-.+ .-.+ +. .++|.
T Consensus 197 ~v~~~~l~~~y~~aDv~v~pS~~E~fgl~~lEAMA~G~PVIas~~gg~~E~i~~~~ng~lv-~~~~~~~~~~~~~~~~G~ 275 (331)
T PHA01630 197 PLPDDDIYSLFAGCDILFYPVRGGAFEIPVIEALALGLDVVVTEKGAWSEWVLSNLDVYWI-KSGRKPKLWYTNPIHVGY 275 (331)
T ss_pred cCCHHHHHHHHHhCCEEEECCccccCChHHHHHHHcCCCEEEeCCCCchhhccCCCceEEe-eecccccccccCCccccc
Confidence 366544 687888833323322 568999999999999987543 32111 1111 00 23455
Q ss_pred EecCCCCHHHHHHHHHHHhcC
Q 022329 228 EVNHDVKRGDIEALVKEMMDG 248 (299)
Q Consensus 228 ~l~~~~~~~~i~~av~~vl~~ 248 (299)
.+. .+.+++.+++.++|.|
T Consensus 276 ~v~--~~~~~~~~~ii~~l~~ 294 (331)
T PHA01630 276 FLD--PDIEDAYQKLLEALAN 294 (331)
T ss_pred ccC--CCHHHHHHHHHHHHhC
Confidence 444 3677888888888876
No 125
>TIGR02919 accessory Sec system glycosyltransferase GtfB. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus.
Probab=92.39 E-value=7.7 Score=37.31 Aligned_cols=138 Identities=7% Similarity=0.066 Sum_probs=84.5
Q ss_pred CCceEEEEeCCccccCHHHHHHHHHHHHcC-CCCEEEEEcCCCCCCCCCCCChhhhhhhcCCeE-Eeeccc-hh-hhhcC
Q 022329 103 ANSVVYVNYGSITVMTEQHLTEFAWGLANS-KRPFLWILRPDVVMGDSVVLPDEYFEEIKDRGF-IVSWCN-QE-QVLSH 178 (299)
Q Consensus 103 ~~~vvyvs~GS~~~~~~~~~~~i~~al~~~-~~~~lw~~~~~~~~~~~~~l~~~~~~~~~~~~~-v~~w~p-q~-~iL~~ 178 (299)
...+++++ +.+.++.+....++. ++.|=....... ...| ..+ ++. +|+. ..++.+ +. .++..
T Consensus 282 ~~~~l~~t-------~s~~I~~i~~Lv~~lPd~~f~Iga~te~----s~kL-~~L-~~y-~nvvly~~~~~~~l~~ly~~ 347 (438)
T TIGR02919 282 RKQALILT-------NSDQIEHLEEIVQALPDYHFHIAALTEM----SSKL-MSL-DKY-DNVKLYPNITTQKIQELYQT 347 (438)
T ss_pred cccEEEEC-------CHHHHHHHHHHHHhCCCcEEEEEecCcc----cHHH-HHH-Hhc-CCcEEECCcChHHHHHHHHh
Confidence 44567666 355666666666554 445443333210 0011 122 233 5555 557777 33 49999
Q ss_pred CCcCceeeccC--chhhhhhhhcCcCeeeccCCcChHhHHHHHHHHhCcEEEecCCCCHHHHHHHHHHHhcCChhHHHHH
Q 022329 179 PSVGAFLTHCG--WNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVKRGDIEALVKEMMDGDEGKKMRQ 256 (299)
Q Consensus 179 ~~v~~~ItHgG--~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~i~~av~~vl~~~~~~~~r~ 256 (299)
+++-+-|+||. ..++.||+.+|+|+++.=.... +...+ .. |..+. .-+.+++.++|.++|.+++ .+++
T Consensus 348 ~dlyLdin~~e~~~~al~eA~~~G~pI~afd~t~~---~~~~i-~~---g~l~~-~~~~~~m~~~i~~lL~d~~--~~~~ 417 (438)
T TIGR02919 348 CDIYLDINHGNEILNAVRRAFEYNLLILGFEETAH---NRDFI-AS---ENIFE-HNEVDQLISKLKDLLNDPN--QFRE 417 (438)
T ss_pred ccEEEEccccccHHHHHHHHHHcCCcEEEEecccC---Ccccc-cC---Cceec-CCCHHHHHHHHHHHhcCHH--HHHH
Confidence 99988899977 6799999999999998765322 22222 22 44443 4578999999999998863 4565
Q ss_pred HHHHHHHH
Q 022329 257 KAWEWKKK 264 (299)
Q Consensus 257 ~a~~l~~~ 264 (299)
+..+-++.
T Consensus 418 ~~~~q~~~ 425 (438)
T TIGR02919 418 LLEQQREH 425 (438)
T ss_pred HHHHHHHH
Confidence 55554444
No 126
>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1. This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=92.17 E-value=1.7 Score=42.75 Aligned_cols=90 Identities=11% Similarity=0.151 Sum_probs=65.1
Q ss_pred CCeEEeeccc--hh-hhhcCCCcCceeecc---CchhhhhhhhcCcCeeeccCCcChHhHHHHHHHHhCcEEEecCCCCH
Q 022329 162 DRGFIVSWCN--QE-QVLSHPSVGAFLTHC---GWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVKR 235 (299)
Q Consensus 162 ~~~~v~~w~p--q~-~iL~~~~v~~~ItHg---G~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~ 235 (299)
.++.+.++.+ +. .++....+ +|.=+ |.++.+||+.+|+|+| .+.....+ +...-|..+. +.
T Consensus 409 ~~v~f~gy~~e~dl~~~~~~arl--~id~s~~eg~~~~ieAiS~GiPqI-------nyg~~~~V-~d~~NG~li~---d~ 475 (519)
T TIGR03713 409 ERIAFTTLTNEEDLISALDKLRL--IIDLSKEPDLYTQISGISAGIPQI-------NKVETDYV-EHNKNGYIID---DI 475 (519)
T ss_pred cEEEEEecCCHHHHHHHHhhheE--EEECCCCCChHHHHHHHHcCCCee-------ecCCceee-EcCCCcEEeC---CH
Confidence 5677888877 33 37766666 77655 6779999999999999 33344555 6777888885 89
Q ss_pred HHHHHHHHHHhcCC-hhHHHHHHHHHHHHH
Q 022329 236 GDIEALVKEMMDGD-EGKKMRQKAWEWKKK 264 (299)
Q Consensus 236 ~~i~~av~~vl~~~-~~~~~r~~a~~l~~~ 264 (299)
.++.+++..+|.+. .+..+...|-+.++.
T Consensus 476 ~~l~~al~~~L~~~~~wn~~~~~sy~~~~~ 505 (519)
T TIGR03713 476 SELLKALDYYLDNLKNWNYSLAYSIKLIDD 505 (519)
T ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Confidence 99999999999876 344555555554444
No 127
>COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane]
Probab=92.14 E-value=4.1 Score=38.16 Aligned_cols=216 Identities=14% Similarity=0.067 Sum_probs=106.9
Q ss_pred CccEEEEcCcccccHHHHHHHHhcCCcEEEeC-CccCcchhhhhhhhhcCCCCCccccchhHHhhccCCCCceEEEEeCC
Q 022329 35 KSSAIIFNTFDEFEHEALEVIASKFPNIYTVG-PLPLLCKQVVEAKFRSFGSSLWKEDTDCLKWLDKRDANSVVYVNYGS 113 (299)
Q Consensus 35 ~~~~~l~ns~~~le~~~~~~~r~~~p~v~~VG-pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~vvyvs~GS 113 (299)
-+|.++. +.-+|.+++ +...-++.||| |+....+-. .+.....+-+....+++++.+--||
T Consensus 136 ~~D~lLa--ilPFE~~~y---~k~g~~~~yVGHpl~d~i~~~-------------~~r~~ar~~l~~~~~~~~lalLPGS 197 (381)
T COG0763 136 YVDHLLA--ILPFEPAFY---DKFGLPCTYVGHPLADEIPLL-------------PDREAAREKLGIDADEKTLALLPGS 197 (381)
T ss_pred HhhHeee--ecCCCHHHH---HhcCCCeEEeCChhhhhcccc-------------ccHHHHHHHhCCCCCCCeEEEecCC
Confidence 3454443 334677654 44333489999 554322100 0111223334334467799999999
Q ss_pred ccccCH---HHHHHHHHHHHc--CCCCEEEEEcCCCCCCCCCCCChhhhh-hhcCCe-EEeecc-chh--hhhcCCCcCc
Q 022329 114 ITVMTE---QHLTEFAWGLAN--SKRPFLWILRPDVVMGDSVVLPDEYFE-EIKDRG-FIVSWC-NQE--QVLSHPSVGA 183 (299)
Q Consensus 114 ~~~~~~---~~~~~i~~al~~--~~~~~lw~~~~~~~~~~~~~l~~~~~~-~~~~~~-~v~~w~-pq~--~iL~~~~v~~ 183 (299)
-..--. ..+...++.|.. .+.+|+..+..... ..... ....+. ...-++ ++. .++..+++
T Consensus 198 R~sEI~rl~~~f~~a~~~l~~~~~~~~~vlp~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~aD~-- 267 (381)
T COG0763 198 RRSEIRRLLPPFVQAAQELKARYPDLKFVLPLVNAKY--------RRIIEEALKWEVAGLSLILIDGEKRKAFAAADA-- 267 (381)
T ss_pred cHHHHHHHHHHHHHHHHHHHhhCCCceEEEecCcHHH--------HHHHHHHhhccccCceEEecCchHHHHHHHhhH--
Confidence 842112 223333444432 35666665542210 11111 111121 122222 222 26666666
Q ss_pred eeeccCchhhhhhhhcCcCeeeccCCc-ChHhHHHHHHHHhC-c-------EEEec-----CCCCHHHHHHHHHHHhcCC
Q 022329 184 FLTHCGWNSTMESICGGVPVICWPFFA-EQQTNCRYACTTWG-I-------GMEVN-----HDVKRGDIEALVKEMMDGD 249 (299)
Q Consensus 184 ~ItHgG~~s~~Eal~~GvP~i~~P~~~-DQ~~na~~v~~~~g-~-------G~~l~-----~~~~~~~i~~av~~vl~~~ 249 (299)
.+.-+|. -++|+..+|+|||+.=-.. =-+.-+++. .... + |..+- .+++++.|.+++..++.|+
T Consensus 268 al~aSGT-~tLE~aL~g~P~Vv~Yk~~~it~~iak~l-vk~~yisLpNIi~~~~ivPEliq~~~~pe~la~~l~~ll~~~ 345 (381)
T COG0763 268 ALAASGT-ATLEAALAGTPMVVAYKVKPITYFIAKRL-VKLPYVSLPNILAGREIVPELIQEDCTPENLARALEELLLNG 345 (381)
T ss_pred HHHhccH-HHHHHHHhCCCEEEEEeccHHHHHHHHHh-ccCCcccchHHhcCCccchHHHhhhcCHHHHHHHHHHHhcCh
Confidence 6666665 4689999999999752210 011223333 1111 1 11111 1589999999999999886
Q ss_pred -hhHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHH
Q 022329 250 -EGKKMRQKAWEWKKKAEAATAVGGQSYNNFDRLVKM 285 (299)
Q Consensus 250 -~~~~~r~~a~~l~~~~~~~~~~gg~s~~~l~~li~~ 285 (299)
+.+.+++...++...+ .+++++.. .+++|-+
T Consensus 346 ~~~~~~~~~~~~l~~~l----~~~~~~e~-aA~~vl~ 377 (381)
T COG0763 346 DRREALKEKFRELHQYL----REDPASEI-AAQAVLE 377 (381)
T ss_pred HhHHHHHHHHHHHHHHH----cCCcHHHH-HHHHHHH
Confidence 3346667777766664 44434444 4444433
No 128
>PLN02939 transferase, transferring glycosyl groups
Probab=91.53 E-value=9.7 Score=40.10 Aligned_cols=84 Identities=6% Similarity=0.005 Sum_probs=55.5
Q ss_pred cCCeEEeeccchh---hhhcCCCcCceeec----cCchhhhhhhhcCcCeeeccCCc--ChHhH--HHHHHHHhCcEEEe
Q 022329 161 KDRGFIVSWCNQE---QVLSHPSVGAFLTH----CGWNSTMESICGGVPVICWPFFA--EQQTN--CRYACTTWGIGMEV 229 (299)
Q Consensus 161 ~~~~~v~~w~pq~---~iL~~~~v~~~ItH----gG~~s~~Eal~~GvP~i~~P~~~--DQ~~n--a~~v~~~~g~G~~l 229 (299)
.+++.+..+.+.. .+++.+++ ||.- +-..+++||+++|+|.|+....+ |--.+ ...+.+.-+.|..+
T Consensus 836 ~drV~FlG~~de~lah~IYAaADI--FLmPSr~EPfGLvqLEAMAyGtPPVVs~vGGL~DtV~d~d~e~i~~eg~NGfLf 913 (977)
T PLN02939 836 NNNIRLILKYDEALSHSIYAASDM--FIIPSMFEPCGLTQMIAMRYGSVPIVRKTGGLNDSVFDFDDETIPVELRNGFTF 913 (977)
T ss_pred CCeEEEEeccCHHHHHHHHHhCCE--EEECCCccCCcHHHHHHHHCCCCEEEecCCCCcceeecCCccccccCCCceEEe
Confidence 3568888887764 47888887 7642 22447899999999999887644 22111 11110223567777
Q ss_pred cCCCCHHHHHHHHHHHhc
Q 022329 230 NHDVKRGDIEALVKEMMD 247 (299)
Q Consensus 230 ~~~~~~~~i~~av~~vl~ 247 (299)
. ..+.+++..++.+++.
T Consensus 914 ~-~~D~eaLa~AL~rAL~ 930 (977)
T PLN02939 914 L-TPDEQGLNSALERAFN 930 (977)
T ss_pred c-CCCHHHHHHHHHHHHH
Confidence 6 4688899999988775
No 129
>PLN02316 synthase/transferase
Probab=91.47 E-value=9.7 Score=40.54 Aligned_cols=113 Identities=4% Similarity=-0.056 Sum_probs=66.8
Q ss_pred cCCeEEeeccchh---hhhcCCCcCceeec----cCchhhhhhhhcCcCeeeccCCc--ChHhH-------HHHHHHHhC
Q 022329 161 KDRGFIVSWCNQE---QVLSHPSVGAFLTH----CGWNSTMESICGGVPVICWPFFA--EQQTN-------CRYACTTWG 224 (299)
Q Consensus 161 ~~~~~v~~w~pq~---~iL~~~~v~~~ItH----gG~~s~~Eal~~GvP~i~~P~~~--DQ~~n-------a~~v~~~~g 224 (299)
++++.+....+.. .+++.+++ |+.- +=..+.+||+++|+|.|+....+ |.-.. +... ..-+
T Consensus 899 ~~rV~f~g~~de~lah~iyaaADi--flmPS~~EP~GLvqLEAMa~GtppVvs~vGGL~DtV~d~d~~~~~~~~~-g~~~ 975 (1036)
T PLN02316 899 HDRARLCLTYDEPLSHLIYAGADF--ILVPSIFEPCGLTQLTAMRYGSIPVVRKTGGLFDTVFDVDHDKERAQAQ-GLEP 975 (1036)
T ss_pred CCeEEEEecCCHHHHHHHHHhCcE--EEeCCcccCccHHHHHHHHcCCCeEEEcCCCcHhhcccccccccccccc-ccCC
Confidence 4567665555554 47877777 7632 22458999999999999876532 22111 1100 1125
Q ss_pred cEEEecCCCCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHhcCCchHHHHHHH
Q 022329 225 IGMEVNHDVKRGDIEALVKEMMDGDEGKKMRQKAWEWKKKAEAATAVGGQSYNNFDRL 282 (299)
Q Consensus 225 ~G~~l~~~~~~~~i~~av~~vl~~~~~~~~r~~a~~l~~~~~~~~~~gg~s~~~l~~l 282 (299)
.|..+. ..+++.+..+|.++|.+ |.+....+++..++++...-+-.....+.
T Consensus 976 tGflf~-~~d~~aLa~AL~raL~~-----~~~~~~~~~~~~r~~m~~dFSW~~~A~~Y 1027 (1036)
T PLN02316 976 NGFSFD-GADAAGVDYALNRAISA-----WYDGRDWFNSLCKRVMEQDWSWNRPALDY 1027 (1036)
T ss_pred ceEEeC-CCCHHHHHHHHHHHHhh-----hhhhHHHHHHHHHHHHHhhCCHHHHHHHH
Confidence 687776 57899999999999873 33334445555555554444433333333
No 130
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=90.70 E-value=1.5 Score=36.45 Aligned_cols=49 Identities=22% Similarity=0.257 Sum_probs=36.2
Q ss_pred cCCeEEeeccchhh----hhcCCCcCceeeccC----chhhhhhhhcCcCeeeccCCcC
Q 022329 161 KDRGFIVSWCNQEQ----VLSHPSVGAFLTHCG----WNSTMESICGGVPVICWPFFAE 211 (299)
Q Consensus 161 ~~~~~v~~w~pq~~----iL~~~~v~~~ItHgG----~~s~~Eal~~GvP~i~~P~~~D 211 (299)
..|+.+.++++... ++..+++ +|+-.. .+++.||+++|+|+|+.+..+.
T Consensus 160 ~~~v~~~~~~~~~~~~~~~~~~~di--~l~~~~~e~~~~~~~Eam~~g~pvi~s~~~~~ 216 (229)
T cd01635 160 LDRVIFLGGLDPEELLALLLAAADV--FVLPSLREGFGLVVLEAMACGLPVIATDVGGP 216 (229)
T ss_pred cccEEEeCCCCcHHHHHHHhhcCCE--EEecccccCcChHHHHHHhCCCCEEEcCCCCc
Confidence 46888888863322 4443666 777665 7899999999999999887543
No 131
>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins. The function of this family is unknown.
Probab=90.34 E-value=3.1 Score=38.07 Aligned_cols=163 Identities=17% Similarity=0.114 Sum_probs=87.6
Q ss_pred CccEEEEcCcccccHHHHHHHHhcCCc-EEEeCCccCcchhhhhhhhhcCCCCCccccchhHHh---hccCCCCceEEEE
Q 022329 35 KSSAIIFNTFDEFEHEALEVIASKFPN-IYTVGPLPLLCKQVVEAKFRSFGSSLWKEDTDCLKW---LDKRDANSVVYVN 110 (299)
Q Consensus 35 ~~~~~l~ns~~~le~~~~~~~r~~~p~-v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~~w---l~~~~~~~vvyvs 110 (299)
..|++++..+..+. ..|| +...|+++...+..... .-..| +... +++.+-|-
T Consensus 97 ~FDlvi~p~HD~~~---------~~~Nvl~t~ga~~~i~~~~l~~--------------a~~~~~~~~~~l-~~p~~avL 152 (311)
T PF06258_consen 97 PFDLVIVPEHDRLP---------RGPNVLPTLGAPNRITPERLAE--------------AAAAWAPRLAAL-PRPRVAVL 152 (311)
T ss_pred ccCEEEECcccCcC---------CCCceEecccCCCcCCHHHHHH--------------HHHhhhhhhccC-CCCeEEEE
Confidence 45777777754331 2355 47788888655432110 11223 3322 45566655
Q ss_pred eCCc---cccCHHHHHHHHHHH----HcCCCCEEEEEcCCCCCCCCCCCChhhhhh----hc--CCeEEe---eccchhh
Q 022329 111 YGSI---TVMTEQHLTEFAWGL----ANSKRPFLWILRPDVVMGDSVVLPDEYFEE----IK--DRGFIV---SWCNQEQ 174 (299)
Q Consensus 111 ~GS~---~~~~~~~~~~i~~al----~~~~~~~lw~~~~~~~~~~~~~l~~~~~~~----~~--~~~~v~---~w~pq~~ 174 (299)
.|-- ..++.+....++..+ +..+..++.+.+.. -|+++.+. .. ..+.+. +.=|...
T Consensus 153 IGG~s~~~~~~~~~~~~l~~~l~~~~~~~~~~~~vttSRR--------Tp~~~~~~L~~~~~~~~~~~~~~~~~~nPy~~ 224 (311)
T PF06258_consen 153 IGGDSKHYRWDEEDAERLLDQLAALAAAYGGSLLVTTSRR--------TPPEAEAALRELLKDNPGVYIWDGTGENPYLG 224 (311)
T ss_pred ECcCCCCcccCHHHHHHHHHHHHHHHHhCCCeEEEEcCCC--------CcHHHHHHHHHhhcCCCceEEecCCCCCcHHH
Confidence 5533 446666444444444 34454555554433 22333222 22 222222 2225667
Q ss_pred hhcCCCcCceeeccCchhhhhhhhcCcCeeeccCCc--ChHh-HHHHHHHHhCcEEEecC
Q 022329 175 VLSHPSVGAFLTHCGWNSTMESICGGVPVICWPFFA--EQQT-NCRYACTTWGIGMEVNH 231 (299)
Q Consensus 175 iL~~~~v~~~ItHgG~~s~~Eal~~GvP~i~~P~~~--DQ~~-na~~v~~~~g~G~~l~~ 231 (299)
+|+.++. +|||==-.+-+.||+..|+|+.++|+-. +.+. -...+ ++.|.-..+..
T Consensus 225 ~La~ad~-i~VT~DSvSMvsEA~~tG~pV~v~~l~~~~~r~~r~~~~L-~~~g~~r~~~~ 282 (311)
T PF06258_consen 225 FLAAADA-IVVTEDSVSMVSEAAATGKPVYVLPLPGRSGRFRRFHQSL-EERGAVRPFTG 282 (311)
T ss_pred HHHhCCE-EEEcCccHHHHHHHHHcCCCEEEecCCCcchHHHHHHHHH-HHCCCEEECCC
Confidence 8888887 3555555777899999999999999875 1111 22344 55677666654
No 132
>PRK10125 putative glycosyl transferase; Provisional
Probab=89.60 E-value=9.4 Score=36.18 Aligned_cols=101 Identities=12% Similarity=-0.026 Sum_probs=60.1
Q ss_pred HHHHHHHHHHHcCCCCE-EEEEcCCCCCCCCCCCChhhhhhhcCCeEEeeccc-h---hhhhcCCCcCceee----ccCc
Q 022329 120 QHLTEFAWGLANSKRPF-LWILRPDVVMGDSVVLPDEYFEEIKDRGFIVSWCN-Q---EQVLSHPSVGAFLT----HCGW 190 (299)
Q Consensus 120 ~~~~~i~~al~~~~~~~-lw~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~w~p-q---~~iL~~~~v~~~It----HgG~ 190 (299)
+....+++++...+..+ ++.++... .. ...++...++.. + ..+++.+++ ||. =|-.
T Consensus 256 Kg~~~li~A~~~l~~~~~L~ivG~g~---------~~----~~~~v~~~g~~~~~~~l~~~y~~aDv--fV~pS~~Egfp 320 (405)
T PRK10125 256 KTDQQLVREMMALGDKIELHTFGKFS---------PF----TAGNVVNHGFETDKRKLMSALNQMDA--LVFSSRVDNYP 320 (405)
T ss_pred ccHHHHHHHHHhCCCCeEEEEEcCCC---------cc----cccceEEecCcCCHHHHHHHHHhCCE--EEECCccccCc
Confidence 44567888887765433 44455321 00 123455555543 2 235656666 654 2345
Q ss_pred hhhhhhhhcCcCeeeccCCcChHhHHHHHHHHhCcEEEecCCCCHHHHHHHH
Q 022329 191 NSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVKRGDIEALV 242 (299)
Q Consensus 191 ~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~i~~av 242 (299)
++++||+++|+|+|+....+ ....+ .. +.|+.+.. -+.+++.+++
T Consensus 321 ~vilEAmA~G~PVVat~~gG----~~Eiv-~~-~~G~lv~~-~d~~~La~~~ 365 (405)
T PRK10125 321 LILCEALSIGVPVIATHSDA----AREVL-QK-SGGKTVSE-EEVLQLAQLS 365 (405)
T ss_pred CHHHHHHHcCCCEEEeCCCC----hHHhE-eC-CcEEEECC-CCHHHHHhcc
Confidence 68999999999999998865 22233 33 57888863 4777777643
No 133
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
Probab=87.63 E-value=8.7 Score=37.13 Aligned_cols=103 Identities=11% Similarity=0.043 Sum_probs=64.2
Q ss_pred eeccchhh---hhcCCCcCceee---ccC-chhhhhhhhcCcC----eeeccCCcChHhHHHHHHHHhCcEEEecCCCCH
Q 022329 167 VSWCNQEQ---VLSHPSVGAFLT---HCG-WNSTMESICGGVP----VICWPFFAEQQTNCRYACTTWGIGMEVNHDVKR 235 (299)
Q Consensus 167 ~~w~pq~~---iL~~~~v~~~It---HgG-~~s~~Eal~~GvP----~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~ 235 (299)
...+++.+ ++..+++ |+. +=| ..++.|++++|+| +|+--..+- +..+ +-|+.++ ..+.
T Consensus 341 ~~~~~~~el~aly~aaDv--~vv~S~~EG~~Lv~lEamA~g~P~~g~vVlS~~~G~----~~~l----~~gllVn-P~d~ 409 (456)
T TIGR02400 341 NRSYDREELMALYRAADV--GLVTPLRDGMNLVAKEYVAAQDPKDGVLILSEFAGA----AQEL----NGALLVN-PYDI 409 (456)
T ss_pred cCCCCHHHHHHHHHhCcE--EEECccccccCccHHHHHHhcCCCCceEEEeCCCCC----hHHh----CCcEEEC-CCCH
Confidence 34556665 5777777 664 335 4578899999999 666555432 2222 3577776 4689
Q ss_pred HHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHH
Q 022329 236 GDIEALVKEMMDGDEGKKMRQKAWEWKKKAEAATAVGGQSYNNFDRLVKMV 286 (299)
Q Consensus 236 ~~i~~av~~vl~~~~~~~~r~~a~~l~~~~~~~~~~gg~s~~~l~~li~~l 286 (299)
+++.++|.++|+.+.. +.+++.+++.+.+. .-+...-..++++.|
T Consensus 410 ~~lA~aI~~aL~~~~~-er~~r~~~~~~~v~-----~~~~~~W~~~~l~~l 454 (456)
T TIGR02400 410 DGMADAIARALTMPLE-EREERHRAMMDKLR-----KNDVQRWREDFLSDL 454 (456)
T ss_pred HHHHHHHHHHHcCCHH-HHHHHHHHHHHHHh-----hCCHHHHHHHHHHHh
Confidence 9999999999986522 45555555555532 134444445555554
No 134
>TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I. This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=87.58 E-value=3.9 Score=37.08 Aligned_cols=138 Identities=10% Similarity=0.073 Sum_probs=77.6
Q ss_pred HhhccCCCCceEEEEeCCc---cccCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCCCCChhhhhhhcCCeEEeec--c
Q 022329 96 KWLDKRDANSVVYVNYGSI---TVMTEQHLTEFAWGLANSKRPFLWILRPDVVMGDSVVLPDEYFEEIKDRGFIVSW--C 170 (299)
Q Consensus 96 ~wl~~~~~~~vvyvs~GS~---~~~~~~~~~~i~~al~~~~~~~lw~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~w--~ 170 (299)
.++....+++.|.+..|+. -..+.+.+.++++.|.+.++++++..++.. +......+.+..+.. .+.+- +
T Consensus 171 ~~~~~~~~~~~i~i~~gas~~~K~wp~e~~~~l~~~l~~~~~~~vl~~g~~~----e~~~~~~i~~~~~~~-~l~g~~sL 245 (319)
T TIGR02193 171 AFLGHALPAPYAVLLHATSRDDKTWPEERWRELARLLLARGLQIVLPWGNDA----EKQRAERIAEALPGA-VVLPKMSL 245 (319)
T ss_pred hhhhccCCCCEEEEEeCCCcccCCCCHHHHHHHHHHHHHCCCeEEEeCCCHH----HHHHHHHHHhhCCCC-eecCCCCH
Confidence 4554333456666666654 357888999999999776888776655321 000111222222222 22221 3
Q ss_pred chh-hhhcCCCcCceeeccCchhhhhhhhcCcCeeeccCCcChHhHHHHHHHHhCcEE-EecC----CCCHHHHHHHHHH
Q 022329 171 NQE-QVLSHPSVGAFLTHCGWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGM-EVNH----DVKRGDIEALVKE 244 (299)
Q Consensus 171 pq~-~iL~~~~v~~~ItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~-~l~~----~~~~~~i~~av~~ 244 (299)
+|. .+++++++ ||+. -.|-++=|.+.|+|+|++ ++- .+..+. .=+|-.. .+.. .++++++.+++++
T Consensus 246 ~el~ali~~a~l--~I~~-DSgp~HlAaa~g~P~i~l--fg~--t~p~~~-~P~~~~~~~~~~~~~~~I~~~~V~~ai~~ 317 (319)
T TIGR02193 246 AEVAALLAGADA--VVGV-DTGLTHLAAALDKPTVTL--YGA--TDPGRT-GGYGKPNVALLGESGANPTPDEVLAALEE 317 (319)
T ss_pred HHHHHHHHcCCE--EEeC-CChHHHHHHHcCCCEEEE--ECC--CCHhhc-ccCCCCceEEccCccCCCCHHHHHHHHHh
Confidence 333 48888887 8885 567788888999999976 220 111111 1111111 1111 6899999999987
Q ss_pred Hh
Q 022329 245 MM 246 (299)
Q Consensus 245 vl 246 (299)
+|
T Consensus 318 ~~ 319 (319)
T TIGR02193 318 LL 319 (319)
T ss_pred hC
Confidence 64
No 135
>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]
Probab=84.56 E-value=12 Score=35.16 Aligned_cols=89 Identities=16% Similarity=0.202 Sum_probs=67.5
Q ss_pred CeEE---eeccchhhhhcCCCcCceeeccCchhhhhhhhcCcCeeeccCCcChHhHHHHHHHHhCcEEEecCCCCHHHHH
Q 022329 163 RGFI---VSWCNQEQVLSHPSVGAFLTHCGWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVKRGDIE 239 (299)
Q Consensus 163 ~~~v---~~w~pq~~iL~~~~v~~~ItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~i~ 239 (299)
++++ .+|.+...++.++-+ ++|-.|. -.-||-..|+|.+++=...+++. .+ +.|.-+.+. .+.+.|.
T Consensus 263 ~v~li~pl~~~~f~~L~~~a~~--iltDSGg-iqEEAp~lg~Pvl~lR~~TERPE---~v--~agt~~lvg--~~~~~i~ 332 (383)
T COG0381 263 RVKLIDPLGYLDFHNLMKNAFL--ILTDSGG-IQEEAPSLGKPVLVLRDTTERPE---GV--EAGTNILVG--TDEENIL 332 (383)
T ss_pred cEEEeCCcchHHHHHHHHhceE--EEecCCc-hhhhHHhcCCcEEeeccCCCCcc---ce--ecCceEEeC--ccHHHHH
Confidence 4665 377888889989877 8888764 45789999999999999999987 23 446666664 5889999
Q ss_pred HHHHHHhcCChhHHHHHHHHHHHHH
Q 022329 240 ALVKEMMDGDEGKKMRQKAWEWKKK 264 (299)
Q Consensus 240 ~av~~vl~~~~~~~~r~~a~~l~~~ 264 (299)
+++.++++++ +..+|.+....-
T Consensus 333 ~~~~~ll~~~---~~~~~m~~~~np 354 (383)
T COG0381 333 DAATELLEDE---EFYERMSNAKNP 354 (383)
T ss_pred HHHHHHhhCh---HHHHHHhcccCC
Confidence 9999999987 555554444443
No 136
>PLN00142 sucrose synthase
Probab=81.25 E-value=11 Score=39.16 Aligned_cols=65 Identities=8% Similarity=0.104 Sum_probs=43.2
Q ss_pred chhhhhhhhcCcCeeeccCCcChHhHHHHHHHHhCcEEEecCCCCHHHHHHHHHHHh----cCCh-hHHHHHHHHH
Q 022329 190 WNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVKRGDIEALVKEMM----DGDE-GKKMRQKAWE 260 (299)
Q Consensus 190 ~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~i~~av~~vl----~~~~-~~~~r~~a~~ 260 (299)
..+++||+++|+|+|+....+ ....+ +.-..|..++. -+.+++.++|.+++ .|++ ++++.+++++
T Consensus 680 GLvvLEAMA~GlPVVATdvGG----~~EIV-~dG~tG~LV~P-~D~eaLA~aI~~lLekLl~Dp~lr~~mg~~Ar~ 749 (815)
T PLN00142 680 GLTVVEAMTCGLPTFATCQGG----PAEII-VDGVSGFHIDP-YHGDEAANKIADFFEKCKEDPSYWNKISDAGLQ 749 (815)
T ss_pred CHHHHHHHHcCCCEEEcCCCC----HHHHh-cCCCcEEEeCC-CCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Confidence 348999999999999976543 34445 55457888873 57888888887654 4542 2344444433
No 137
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=81.05 E-value=12 Score=38.67 Aligned_cols=80 Identities=10% Similarity=0.108 Sum_probs=51.9
Q ss_pred cCCeEEeecc-chh---hhhcC-CC-cCceeec----cCchhhhhhhhcCcCeeeccCCcChHhHHHHHHHHhCcEEEec
Q 022329 161 KDRGFIVSWC-NQE---QVLSH-PS-VGAFLTH----CGWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVN 230 (299)
Q Consensus 161 ~~~~~v~~w~-pq~---~iL~~-~~-v~~~ItH----gG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~ 230 (299)
.+++.+.++. +.. .++.+ ++ .++||.- +-..+++||+++|+|+|+.-..+ ....+ +.-..|..++
T Consensus 618 ~g~V~flG~~~~~~~~~elyr~iAd~adVfV~PS~~EpFGLvvLEAMAcGlPVVAT~~GG----~~EiV-~dg~tGfLVd 692 (784)
T TIGR02470 618 HGQIRWIGAQLNRVRNGELYRYIADTKGIFVQPALYEAFGLTVLEAMTCGLPTFATRFGG----PLEII-QDGVSGFHID 692 (784)
T ss_pred CCeEEEccCcCCcccHHHHHHHhhccCcEEEECCcccCCCHHHHHHHHcCCCEEEcCCCC----HHHHh-cCCCcEEEeC
Confidence 3667777764 322 24432 21 1236632 22458999999999999976543 44445 5556788887
Q ss_pred CCCCHHHHHHHHHHHh
Q 022329 231 HDVKRGDIEALVKEMM 246 (299)
Q Consensus 231 ~~~~~~~i~~av~~vl 246 (299)
.-+.+++.+++.+++
T Consensus 693 -p~D~eaLA~aL~~ll 707 (784)
T TIGR02470 693 -PYHGEEAAEKIVDFF 707 (784)
T ss_pred -CCCHHHHHHHHHHHH
Confidence 457899999999876
No 138
>cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS). Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=77.10 E-value=7.3 Score=34.60 Aligned_cols=95 Identities=14% Similarity=0.142 Sum_probs=58.4
Q ss_pred CceEEEEeCCc---cccCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCCCCChhhhhhh-cCCeE-Eeec--cch-hhh
Q 022329 104 NSVVYVNYGSI---TVMTEQHLTEFAWGLANSKRPFLWILRPDVVMGDSVVLPDEYFEEI-KDRGF-IVSW--CNQ-EQV 175 (299)
Q Consensus 104 ~~vvyvs~GS~---~~~~~~~~~~i~~al~~~~~~~lw~~~~~~~~~~~~~l~~~~~~~~-~~~~~-v~~w--~pq-~~i 175 (299)
++.|.+..|+. -..+.+.+.++++.|.+.++++++..+... ......+.+.. ..++. +.+- +.+ ..+
T Consensus 121 ~~~i~i~~~~~~~~k~w~~~~~~~l~~~l~~~~~~ivl~g~~~e-----~~~~~~i~~~~~~~~~~~~~~~~~l~e~~~l 195 (279)
T cd03789 121 KPVVVLPPGASGPAKRWPAERFAALADRLLARGARVVLTGGPAE-----RELAEEIAAALGGPRVVNLAGKTSLRELAAL 195 (279)
T ss_pred CCEEEECCCCCCccccCCHHHHHHHHHHHHHCCCEEEEEechhh-----HHHHHHHHHhcCCCccccCcCCCCHHHHHHH
Confidence 45677777775 357789999999999877888876654321 01111122222 11222 2221 122 347
Q ss_pred hcCCCcCceeeccCchhhhhhhhcCcCeeec
Q 022329 176 LSHPSVGAFLTHCGWNSTMESICGGVPVICW 206 (299)
Q Consensus 176 L~~~~v~~~ItHgG~~s~~Eal~~GvP~i~~ 206 (299)
++++++ +|+.-. |.++=|.+.|+|+|++
T Consensus 196 i~~~~l--~I~~Ds-g~~HlA~a~~~p~i~l 223 (279)
T cd03789 196 LARADL--VVTNDS-GPMHLAAALGTPTVAL 223 (279)
T ss_pred HHhCCE--EEeeCC-HHHHHHHHcCCCEEEE
Confidence 888888 999854 6677778999999887
No 139
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.
Probab=76.73 E-value=23 Score=34.24 Aligned_cols=73 Identities=14% Similarity=0.083 Sum_probs=48.3
Q ss_pred Eeeccchhh---hhcCCCcCceee---ccC-chhhhhhhhcCcC----eeeccCCcChHhHHHHHHHHhCcEEEecCCCC
Q 022329 166 IVSWCNQEQ---VLSHPSVGAFLT---HCG-WNSTMESICGGVP----VICWPFFAEQQTNCRYACTTWGIGMEVNHDVK 234 (299)
Q Consensus 166 v~~w~pq~~---iL~~~~v~~~It---HgG-~~s~~Eal~~GvP----~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~ 234 (299)
+.+++++.+ +++.+++ ||. +-| ..+++||+++|+| +|+--..+ + . +...-|+.++ ..+
T Consensus 345 ~~g~v~~~el~~~y~~aDv--~v~pS~~Eg~~lv~lEAma~g~p~~g~vV~S~~~G-----~--~-~~~~~g~lv~-p~d 413 (460)
T cd03788 345 LYRSLPREELAALYRAADV--ALVTPLRDGMNLVAKEYVACQDDDPGVLILSEFAG-----A--A-EELSGALLVN-PYD 413 (460)
T ss_pred EeCCCCHHHHHHHHHhccE--EEeCccccccCcccceeEEEecCCCceEEEecccc-----c--h-hhcCCCEEEC-CCC
Confidence 446777765 5777887 552 334 4477999999999 54443321 1 1 1123466665 468
Q ss_pred HHHHHHHHHHHhcCC
Q 022329 235 RGDIEALVKEMMDGD 249 (299)
Q Consensus 235 ~~~i~~av~~vl~~~ 249 (299)
.+++.++|.++++++
T Consensus 414 ~~~la~ai~~~l~~~ 428 (460)
T cd03788 414 IDEVADAIHRALTMP 428 (460)
T ss_pred HHHHHHHHHHHHcCC
Confidence 999999999999865
No 140
>COG4370 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=76.29 E-value=14 Score=33.70 Aligned_cols=87 Identities=16% Similarity=0.132 Sum_probs=51.6
Q ss_pred EeeccchhhhhcCCCcCceeeccCchhhhhhhhcCcCeeeccCCcChHhHH--HHHHHHhCcEEEecCCCCHHHHHHHHH
Q 022329 166 IVSWCNQEQVLSHPSVGAFLTHCGWNSTMESICGGVPVICWPFFAEQQTNC--RYACTTWGIGMEVNHDVKRGDIEALVK 243 (299)
Q Consensus 166 v~~w~pq~~iL~~~~v~~~ItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na--~~v~~~~g~G~~l~~~~~~~~i~~av~ 243 (299)
+..|-...++|.+.++ .|--.|. .+-.++--|+|+|.+|-.+-|+.-. .+=..-+|..+.+-. -.+..-..++.
T Consensus 299 ~lsqqsfadiLH~ada--algmAGT-AtEQavGLGkPvi~fPg~GPQy~pgFA~rQ~rLLG~sltlv~-~~aq~a~~~~q 374 (412)
T COG4370 299 WLSQQSFADILHAADA--ALGMAGT-ATEQAVGLGKPVIGFPGQGPQYNPGFAERQQRLLGASLTLVR-PEAQAAAQAVQ 374 (412)
T ss_pred EEeHHHHHHHHHHHHH--HHHhccc-hHHHhhccCCceeecCCCCCCcChHHHHHHHHHhcceeeecC-CchhhHHHHHH
Confidence 3455555667777666 4433332 2334577899999999999998743 332234566666543 23333344445
Q ss_pred HHhcCChhHHHHHHHH
Q 022329 244 EMMDGDEGKKMRQKAW 259 (299)
Q Consensus 244 ~vl~~~~~~~~r~~a~ 259 (299)
+++.|+ .+.++++
T Consensus 375 ~ll~dp---~r~~air 387 (412)
T COG4370 375 ELLGDP---QRLTAIR 387 (412)
T ss_pred HHhcCh---HHHHHHH
Confidence 599988 4444444
No 141
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=74.70 E-value=4.4 Score=33.67 Aligned_cols=70 Identities=13% Similarity=0.201 Sum_probs=40.2
Q ss_pred cCCCcCceeeccCchhhhhhhhcCcCeeeccCCc-C----------------------hHhHHHHHHHHhCcEEEecCCC
Q 022329 177 SHPSVGAFLTHCGWNSTMESICGGVPVICWPFFA-E----------------------QQTNCRYACTTWGIGMEVNHDV 233 (299)
Q Consensus 177 ~~~~v~~~ItHgG~~s~~Eal~~GvP~i~~P~~~-D----------------------Q~~na~~v~~~~g~G~~l~~~~ 233 (299)
.+..+.++|++||...++.... ++|+|-+|..+ | ...+...+.+-+|+-+....--
T Consensus 31 ~~~g~dViIsRG~ta~~lr~~~-~iPVV~I~~s~~Dil~al~~a~~~~~~Iavv~~~~~~~~~~~~~~ll~~~i~~~~~~ 109 (176)
T PF06506_consen 31 ESEGADVIISRGGTAELLRKHV-SIPVVEIPISGFDILRALAKAKKYGPKIAVVGYPNIIPGLESIEELLGVDIKIYPYD 109 (176)
T ss_dssp TTTT-SEEEEEHHHHHHHHCC--SS-EEEE---HHHHHHHHHHCCCCTSEEEEEEESS-SCCHHHHHHHHT-EEEEEEES
T ss_pred HhcCCeEEEECCHHHHHHHHhC-CCCEEEECCCHhHHHHHHHHHHhcCCcEEEEecccccHHHHHHHHHhCCceEEEEEC
Confidence 5566777999999999999988 99999999832 1 2222333333344433333334
Q ss_pred CHHHHHHHHHHHhc
Q 022329 234 KRGDIEALVKEMMD 247 (299)
Q Consensus 234 ~~~~i~~av~~vl~ 247 (299)
+.+++...|.++..
T Consensus 110 ~~~e~~~~i~~~~~ 123 (176)
T PF06506_consen 110 SEEEIEAAIKQAKA 123 (176)
T ss_dssp SHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHH
Confidence 66777777777654
No 142
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.
Probab=74.48 E-value=12 Score=37.34 Aligned_cols=76 Identities=13% Similarity=0.077 Sum_probs=46.2
Q ss_pred hhhhhcCCCcCceee-ccC-chhhhhhhhcCcCeeeccCCc-ChHhHHHHHHHHh-CcEEEecC------CCCHHHHHHH
Q 022329 172 QEQVLSHPSVGAFLT-HCG-WNSTMESICGGVPVICWPFFA-EQQTNCRYACTTW-GIGMEVNH------DVKRGDIEAL 241 (299)
Q Consensus 172 q~~iL~~~~v~~~It-HgG-~~s~~Eal~~GvP~i~~P~~~-DQ~~na~~v~~~~-g~G~~l~~------~~~~~~i~~a 241 (299)
..+++..+++.+|-+ +=| ..+++||+++|+|+|+....+ ..... ..+ ..- ..|+.+.. ..+.+++.++
T Consensus 468 y~E~~~g~dl~v~PS~yE~fG~~~lEAma~G~PvI~t~~~gf~~~v~-E~v-~~~~~~gi~V~~r~~~~~~e~v~~La~~ 545 (590)
T cd03793 468 YEEFVRGCHLGVFPSYYEPWGYTPAECTVMGIPSITTNLSGFGCFME-EHI-EDPESYGIYIVDRRFKSPDESVQQLTQY 545 (590)
T ss_pred hHHHhhhceEEEeccccCCCCcHHHHHHHcCCCEEEccCcchhhhhH-HHh-ccCCCceEEEecCCccchHHHHHHHHHH
Confidence 344566667633333 344 448899999999999988742 23322 112 211 25677653 2456778888
Q ss_pred HHHHhcCC
Q 022329 242 VKEMMDGD 249 (299)
Q Consensus 242 v~~vl~~~ 249 (299)
+.++++.+
T Consensus 546 m~~~~~~~ 553 (590)
T cd03793 546 MYEFCQLS 553 (590)
T ss_pred HHHHhCCc
Confidence 88888654
No 143
>PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT. Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport
Probab=74.47 E-value=17 Score=32.18 Aligned_cols=43 Identities=21% Similarity=0.179 Sum_probs=33.9
Q ss_pred CeEEeeccchhhhhcCCCcCceeeccCchhhhhhhhcCcCeeeccC
Q 022329 163 RGFIVSWCNQEQVLSHPSVGAFLTHCGWNSTMESICGGVPVICWPF 208 (299)
Q Consensus 163 ~~~v~~w~pq~~iL~~~~v~~~ItHgG~~s~~Eal~~GvP~i~~P~ 208 (299)
.+.+.+-.+-.++|.+++. +||-.+. .-+||+.+|+|++++..
T Consensus 184 ~~~~~~~~~~~~Ll~~s~~--VvtinSt-vGlEAll~gkpVi~~G~ 226 (269)
T PF05159_consen 184 VVIIDDDVNLYELLEQSDA--VVTINST-VGLEALLHGKPVIVFGR 226 (269)
T ss_pred eEEECCCCCHHHHHHhCCE--EEEECCH-HHHHHHHcCCceEEecC
Confidence 3445566777789999888 8887654 67899999999999875
No 144
>PRK14099 glycogen synthase; Provisional
Probab=73.02 E-value=95 Score=30.19 Aligned_cols=86 Identities=6% Similarity=0.088 Sum_probs=47.9
Q ss_pred cCCe-EEeeccchhh-hh-cCCCcCceee---ccC-chhhhhhhhcCcCeeeccCCc--ChHhHHHHHHHH--hCcEEEe
Q 022329 161 KDRG-FIVSWCNQEQ-VL-SHPSVGAFLT---HCG-WNSTMESICGGVPVICWPFFA--EQQTNCRYACTT--WGIGMEV 229 (299)
Q Consensus 161 ~~~~-~v~~w~pq~~-iL-~~~~v~~~It---HgG-~~s~~Eal~~GvP~i~~P~~~--DQ~~na~~v~~~--~g~G~~l 229 (299)
++++ .+.+|-.+.. ++ +.+++ |+. +=| ..+.+||+++|+|.|+....+ |--.+.....+. -+.|+.+
T Consensus 349 ~~~v~~~~G~~~~l~~~~~a~aDi--fv~PS~~E~fGl~~lEAma~G~ppVvs~~GGl~d~V~~~~~~~~~~~~~~G~l~ 426 (485)
T PRK14099 349 PGQIGVVIGYDEALAHLIQAGADA--LLVPSRFEPCGLTQLCALRYGAVPVVARVGGLADTVVDANEMAIATGVATGVQF 426 (485)
T ss_pred CCCEEEEeCCCHHHHHHHHhcCCE--EEECCccCCCcHHHHHHHHCCCCcEEeCCCCccceeecccccccccCCCceEEe
Confidence 4455 4566633322 23 34565 653 223 347799999998777765432 321111100011 1568877
Q ss_pred cCCCCHHHHHHHHHH---HhcCC
Q 022329 230 NHDVKRGDIEALVKE---MMDGD 249 (299)
Q Consensus 230 ~~~~~~~~i~~av~~---vl~~~ 249 (299)
. .-+.+++.+++.+ +++|+
T Consensus 427 ~-~~d~~~La~ai~~a~~l~~d~ 448 (485)
T PRK14099 427 S-PVTADALAAALRKTAALFADP 448 (485)
T ss_pred C-CCCHHHHHHHHHHHHHHhcCH
Confidence 6 4689999999987 55553
No 145
>TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative. This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II.
Probab=72.92 E-value=13 Score=34.19 Aligned_cols=98 Identities=11% Similarity=0.131 Sum_probs=61.2
Q ss_pred CCceEEEEeCCc---cccCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCCCCChhhhhhhcC-CeE-Eeec--cchh-h
Q 022329 103 ANSVVYVNYGSI---TVMTEQHLTEFAWGLANSKRPFLWILRPDVVMGDSVVLPDEYFEEIKD-RGF-IVSW--CNQE-Q 174 (299)
Q Consensus 103 ~~~vvyvs~GS~---~~~~~~~~~~i~~al~~~~~~~lw~~~~~~~~~~~~~l~~~~~~~~~~-~~~-v~~w--~pq~-~ 174 (299)
+++.|.+..|+. -.++.+.+.++++.|...++++++..+.... +......+.+..+. ++. +.+- +.+. .
T Consensus 180 ~~~~i~i~p~a~~~~K~Wp~e~~~~l~~~l~~~~~~ivl~g~p~~~---e~~~~~~i~~~~~~~~~~~l~g~~sL~el~a 256 (344)
T TIGR02201 180 GQNYIVIQPTSRWFFKCWDNDRFSALIDALHARGYEVVLTSGPDKD---ELAMVNEIAQGCQTPRVTSLAGKLTLPQLAA 256 (344)
T ss_pred CCCEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEecCCCHH---HHHHHHHHHhhCCCCcccccCCCCCHHHHHH
Confidence 456777777775 3477889999999998778887766432200 00011112112121 121 2222 2333 3
Q ss_pred hhcCCCcCceeeccCchhhhhhhhcCcCeeec
Q 022329 175 VLSHPSVGAFLTHCGWNSTMESICGGVPVICW 206 (299)
Q Consensus 175 iL~~~~v~~~ItHgG~~s~~Eal~~GvP~i~~ 206 (299)
+++++++ ||+. -.|-++=|.+.|+|+|++
T Consensus 257 li~~a~l--~Vs~-DSGp~HlAaA~g~p~v~L 285 (344)
T TIGR02201 257 LIDHARL--FIGV-DSVPMHMAAALGTPLVAL 285 (344)
T ss_pred HHHhCCE--EEec-CCHHHHHHHHcCCCEEEE
Confidence 8888888 9998 788899999999999986
No 146
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=70.16 E-value=28 Score=36.24 Aligned_cols=99 Identities=14% Similarity=0.147 Sum_probs=58.5
Q ss_pred hhhcCCCcCceee---ccCch-hhhhhhhcCcC---eeeccCCcChHhHHHHHHHHhC-cEEEecCCCCHHHHHHHHHHH
Q 022329 174 QVLSHPSVGAFLT---HCGWN-STMESICGGVP---VICWPFFAEQQTNCRYACTTWG-IGMEVNHDVKRGDIEALVKEM 245 (299)
Q Consensus 174 ~iL~~~~v~~~It---HgG~~-s~~Eal~~GvP---~i~~P~~~DQ~~na~~v~~~~g-~G~~l~~~~~~~~i~~av~~v 245 (299)
.+++.+++ |+. +-|.| .++|++++|.| +++++-++ -.+ +.+| .|+.++ ..+.+++.++|.++
T Consensus 371 aly~~ADv--fvvtSlrEGmnLv~lEamA~g~p~~gvlVlSe~~---G~~----~~l~~~allVn-P~D~~~lA~AI~~a 440 (797)
T PLN03063 371 ALYAITDV--MLVTSLRDGMNLVSYEFVACQKAKKGVLVLSEFA---GAG----QSLGAGALLVN-PWNITEVSSAIKEA 440 (797)
T ss_pred HHHHhCCE--EEeCccccccCcchhhHheeecCCCCCEEeeCCc---Cch----hhhcCCeEEEC-CCCHHHHHHHHHHH
Confidence 37777777 653 34665 67899999999 44444321 111 1234 577887 47899999999999
Q ss_pred hcCChhHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHh
Q 022329 246 MDGDEGKKMRQKAWEWKKKAEAATAVGGQSYNNFDRLVKMVLQ 288 (299)
Q Consensus 246 l~~~~~~~~r~~a~~l~~~~~~~~~~gg~s~~~l~~li~~l~~ 288 (299)
|+.+. .+-+++.+++.+.++ .-+...-...+++.+..
T Consensus 441 L~m~~-~er~~r~~~~~~~v~-----~~~~~~Wa~~fl~~l~~ 477 (797)
T PLN03063 441 LNMSD-EERETRHRHNFQYVK-----THSAQKWADDFMSELND 477 (797)
T ss_pred HhCCH-HHHHHHHHHHHHhhh-----hCCHHHHHHHHHHHHHH
Confidence 98331 134444444444433 12333333555555543
No 147
>PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A.
Probab=68.64 E-value=12 Score=32.38 Aligned_cols=98 Identities=9% Similarity=0.119 Sum_probs=52.4
Q ss_pred CCceEEEEeCCc---cccCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCCCCChhhhhhhcCCe-EEeec--cch-hhh
Q 022329 103 ANSVVYVNYGSI---TVMTEQHLTEFAWGLANSKRPFLWILRPDVVMGDSVVLPDEYFEEIKDRG-FIVSW--CNQ-EQV 175 (299)
Q Consensus 103 ~~~vvyvs~GS~---~~~~~~~~~~i~~al~~~~~~~lw~~~~~~~~~~~~~l~~~~~~~~~~~~-~v~~w--~pq-~~i 175 (299)
+++.|.+..|+. -.++.+.+.++++.|.+.+++++...+.... .......+.+..+.++ .+.+- +.+ ..+
T Consensus 104 ~~~~i~i~~~a~~~~k~wp~e~~~~l~~~l~~~~~~vvl~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~e~~al 180 (247)
T PF01075_consen 104 DKPYIGINPGASWPSKRWPAEKWAELIERLKERGYRVVLLGGPEEQ---EKEIADQIAAGLQNPVINLAGKTSLRELAAL 180 (247)
T ss_dssp TSSEEEEE---SSGGGS--HHHHHHHHHHHCCCT-EEEE--SSHHH---HHHHHHHHHTTHTTTTEEETTTS-HHHHHHH
T ss_pred cCCeEEEeecCCCccccCCHHHHHHHHHHHHhhCceEEEEccchHH---HHHHHHHHHHhcccceEeecCCCCHHHHHHH
Confidence 567788888876 3578899999999998888776655442210 0000001111112222 23222 223 347
Q ss_pred hcCCCcCceeeccCchhhhhhhhcCcCeeec
Q 022329 176 LSHPSVGAFLTHCGWNSTMESICGGVPVICW 206 (299)
Q Consensus 176 L~~~~v~~~ItHgG~~s~~Eal~~GvP~i~~ 206 (299)
++++++ ||+. ..|.++=|.+.|+|+|++
T Consensus 181 i~~a~~--~I~~-Dtg~~HlA~a~~~p~v~l 208 (247)
T PF01075_consen 181 ISRADL--VIGN-DTGPMHLAAALGTPTVAL 208 (247)
T ss_dssp HHTSSE--EEEE-SSHHHHHHHHTT--EEEE
T ss_pred HhcCCE--EEec-CChHHHHHHHHhCCEEEE
Confidence 888887 8875 567788899999999998
No 148
>PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria. They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D.
Probab=63.56 E-value=9.2 Score=35.48 Aligned_cols=112 Identities=12% Similarity=0.086 Sum_probs=62.2
Q ss_pred cCCeEEe-eccchhhhhcCCCcCceeeccCchhhhhhhhcCcCeeeccCCcChHhHHHHHH---HHhCcEEEecCCCCHH
Q 022329 161 KDRGFIV-SWCNQEQVLSHPSVGAFLTHCGWNSTMESICGGVPVICWPFFAEQQTNCRYAC---TTWGIGMEVNHDVKRG 236 (299)
Q Consensus 161 ~~~~~v~-~w~pq~~iL~~~~v~~~ItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~---~~~g~G~~l~~~~~~~ 236 (299)
.+++... +..+-.++|..+++ +||-- .+.+.|.+..+.|+|....-.|.+...+.+. +....|..+ .+.+
T Consensus 251 ~~~i~~~~~~~~~~~ll~~aDi--LITDy-SSi~fD~~~l~KPiify~~D~~~Y~~~rg~~~~~~~~~pg~~~---~~~~ 324 (369)
T PF04464_consen 251 NSNIIFVSDNEDIYDLLAAADI--LITDY-SSIIFDFLLLNKPIIFYQPDLEEYEKERGFYFDYEEDLPGPIV---YNFE 324 (369)
T ss_dssp TTTEEE-TT-S-HHHHHHT-SE--EEESS--THHHHHGGGT--EEEE-TTTTTTTTTSSBSS-TTTSSSS-EE---SSHH
T ss_pred CCcEEECCCCCCHHHHHHhcCE--EEEec-hhHHHHHHHhCCCEEEEeccHHHHhhccCCCCchHhhCCCcee---CCHH
Confidence 3566543 44566789999998 99987 4478999999999998887666653321100 122233333 4889
Q ss_pred HHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHhcCCchHHHHHHH
Q 022329 237 DIEALVKEMMDGDEGKKMRQKAWEWKKKAEAATAVGGQSYNNFDRL 282 (299)
Q Consensus 237 ~i~~av~~vl~~~~~~~~r~~a~~l~~~~~~~~~~gg~s~~~l~~l 282 (299)
+|.++|..++.+.. .++++.++..+.+-. ...|.+.+.+.+.
T Consensus 325 eL~~~i~~~~~~~~--~~~~~~~~~~~~~~~--~~Dg~s~eri~~~ 366 (369)
T PF04464_consen 325 ELIEAIENIIENPD--EYKEKREKFRDKFFK--YNDGNSSERIVNY 366 (369)
T ss_dssp HHHHHHTTHHHHHH--HTHHHHHHHHHHHST--T--S-HHHHHHHH
T ss_pred HHHHHHHhhhhCCH--HHHHHHHHHHHHhCC--CCCchHHHHHHHH
Confidence 99999999887542 445555555555432 2344444434433
No 149
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=63.09 E-value=32 Score=31.91 Aligned_cols=99 Identities=12% Similarity=0.104 Sum_probs=55.2
Q ss_pred ceEEEEeCCccccCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCCCCCh-hhh-hhhcCCeE---------------Ee
Q 022329 105 SVVYVNYGSITVMTEQHLTEFAWGLANSKRPFLWILRPDVVMGDSVVLPD-EYF-EEIKDRGF---------------IV 167 (299)
Q Consensus 105 ~vvyvs~GS~~~~~~~~~~~i~~al~~~~~~~lw~~~~~~~~~~~~~l~~-~~~-~~~~~~~~---------------v~ 167 (299)
.+++.+-||.+..-+ ...+++.|++.++.++|+....... ...++. ++. ..++...+ +.
T Consensus 3 ~i~~~~GGTGGHi~P--ala~a~~l~~~g~~v~~vg~~~~~e--~~l~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 78 (352)
T PRK12446 3 KIVFTGGGSAGHVTP--NLAIIPYLKEDNWDISYIGSHQGIE--KTIIEKENIPYYSISSGKLRRYFDLKNIKDPFLVMK 78 (352)
T ss_pred eEEEEcCCcHHHHHH--HHHHHHHHHhCCCEEEEEECCCccc--cccCcccCCcEEEEeccCcCCCchHHHHHHHHHHHH
Confidence 477778888765433 2456777877899999997644211 111111 110 00010000 00
Q ss_pred eccchhhhhcCCCcCceeeccCchh---hhhhhhcCcCeeecc
Q 022329 168 SWCNQEQVLSHPSVGAFLTHCGWNS---TMESICGGVPVICWP 207 (299)
Q Consensus 168 ~w~pq~~iL~~~~v~~~ItHgG~~s---~~Eal~~GvP~i~~P 207 (299)
.+.--..++..-+-.++|++||+-| ++.|...|+|+++.=
T Consensus 79 ~~~~~~~i~~~~kPdvvi~~Ggy~s~p~~~aa~~~~~p~~i~e 121 (352)
T PRK12446 79 GVMDAYVRIRKLKPDVIFSKGGFVSVPVVIGGWLNRVPVLLHE 121 (352)
T ss_pred HHHHHHHHHHhcCCCEEEecCchhhHHHHHHHHHcCCCEEEEC
Confidence 1111112455434444999999997 899999999998743
No 150
>TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II. This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=62.79 E-value=36 Score=30.97 Aligned_cols=96 Identities=8% Similarity=0.040 Sum_probs=59.2
Q ss_pred CCceEEEEeCCc----cccCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCCCCChhhhhhhcCCeE-Eee--ccchh-h
Q 022329 103 ANSVVYVNYGSI----TVMTEQHLTEFAWGLANSKRPFLWILRPDVVMGDSVVLPDEYFEEIKDRGF-IVS--WCNQE-Q 174 (299)
Q Consensus 103 ~~~vvyvs~GS~----~~~~~~~~~~i~~al~~~~~~~lw~~~~~~~~~~~~~l~~~~~~~~~~~~~-v~~--w~pq~-~ 174 (299)
.++.|.+.-|+. -.++.+.+.++++.|.+.+++++..-+... ......+.+..+.++. +.+ -+.+. .
T Consensus 173 ~~~~i~i~pga~~~~~K~Wp~e~~~~li~~l~~~~~~ivl~G~~~e-----~~~~~~i~~~~~~~~~~l~g~~sL~el~a 247 (334)
T TIGR02195 173 ERPIIAFCPGAEFGPAKRWPHEHYAELAKRLIDQGYQVVLFGSAKD-----HPAGNEIEALLPGELRNLAGETSLDEAVD 247 (334)
T ss_pred CCCEEEEcCCCCCCccCCCCHHHHHHHHHHHHHCCCEEEEEEChhh-----HHHHHHHHHhCCcccccCCCCCCHHHHHH
Confidence 467888887763 347889999999999776777766543221 1111222222223222 222 12333 3
Q ss_pred hhcCCCcCceeeccCchhhhhhhhcCcCeeec
Q 022329 175 VLSHPSVGAFLTHCGWNSTMESICGGVPVICW 206 (299)
Q Consensus 175 iL~~~~v~~~ItHgG~~s~~Eal~~GvP~i~~ 206 (299)
+++++++ ||+. -.|-++=|.+.|+|+|++
T Consensus 248 li~~a~l--~I~~-DSGp~HlAaA~~~P~i~l 276 (334)
T TIGR02195 248 LIALAKA--VVTN-DSGLMHVAAALNRPLVAL 276 (334)
T ss_pred HHHhCCE--EEee-CCHHHHHHHHcCCCEEEE
Confidence 8888887 8885 566788888999999875
No 151
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=62.58 E-value=40 Score=34.64 Aligned_cols=111 Identities=12% Similarity=0.043 Sum_probs=62.0
Q ss_pred EEeeccchhh---hhcCCCcCceeec---cC-chhhhhhhhcCcCeeeccCCcChHhHHHHHHHHhCcEEEecCCCCHHH
Q 022329 165 FIVSWCNQEQ---VLSHPSVGAFLTH---CG-WNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVKRGD 237 (299)
Q Consensus 165 ~v~~w~pq~~---iL~~~~v~~~ItH---gG-~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~ 237 (299)
++.+++++.+ +++.+++ |+.- -| ...+.|++++|+|-.+.|+..+----+. ++.-|+.++ ..+.++
T Consensus 345 ~~~~~~~~~~l~~ly~~aDv--~v~~S~~EG~~lv~~Eama~~~~~~g~~vls~~~G~~~----~l~~~llv~-P~d~~~ 417 (726)
T PRK14501 345 YFYRSLPFEELVALYRAADV--ALVTPLRDGMNLVAKEYVASRTDGDGVLILSEMAGAAA----ELAEALLVN-PNDIEG 417 (726)
T ss_pred EEeCCCCHHHHHHHHHhccE--EEecccccccCcccceEEEEcCCCCceEEEecccchhH----HhCcCeEEC-CCCHHH
Confidence 3556778775 6667777 5543 24 4477999999776333333221111111 223377776 468999
Q ss_pred HHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHh
Q 022329 238 IEALVKEMMDGDEGKKMRQKAWEWKKKAEAATAVGGQSYNNFDRLVKMVLQ 288 (299)
Q Consensus 238 i~~av~~vl~~~~~~~~r~~a~~l~~~~~~~~~~gg~s~~~l~~li~~l~~ 288 (299)
+.++|.++|+.+.. +.+++.+++.+.++ .-+...-..++++.+.+
T Consensus 418 la~ai~~~l~~~~~-e~~~r~~~~~~~v~-----~~~~~~w~~~~l~~l~~ 462 (726)
T PRK14501 418 IAAAIKRALEMPEE-EQRERMQAMQERLR-----RYDVHKWASDFLDELRE 462 (726)
T ss_pred HHHHHHHHHcCCHH-HHHHHHHHHHHHHH-----hCCHHHHHHHHHHHHHH
Confidence 99999999986421 33334333333322 23444444555555544
No 152
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=57.98 E-value=1.2e+02 Score=25.98 Aligned_cols=80 Identities=14% Similarity=0.247 Sum_probs=51.6
Q ss_pred CCeEEeeccch---hhhhcCCCcCceeec---cCch-hhhhhhhcCcCeeeccCCcChHhHHHHHHHHhCcEEEecCCCC
Q 022329 162 DRGFIVSWCNQ---EQVLSHPSVGAFLTH---CGWN-STMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVK 234 (299)
Q Consensus 162 ~~~~v~~w~pq---~~iL~~~~v~~~ItH---gG~~-s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~ 234 (299)
.++.+.+++|+ ..++..+++ ++.- .|.+ ++.|++++|+|+|..... .....+ ...+.|. +....+
T Consensus 257 ~~v~~~g~~~~~~~~~~~~~~~~--~v~ps~~e~~~~~~~Ea~a~g~pvi~~~~~----~~~e~~-~~~~~g~-~~~~~~ 328 (381)
T COG0438 257 DNVKFLGYVPDEELAELLASADV--FVLPSLSEGFGLVLLEAMAAGTPVIASDVG----GIPEVV-EDGETGL-LVPPGD 328 (381)
T ss_pred CcEEEecccCHHHHHHHHHhCCE--EEeccccccchHHHHHHHhcCCcEEECCCC----ChHHHh-cCCCceE-ecCCCC
Confidence 56778888882 236666666 4444 3443 469999999999776653 222223 3322466 332336
Q ss_pred HHHHHHHHHHHhcCC
Q 022329 235 RGDIEALVKEMMDGD 249 (299)
Q Consensus 235 ~~~i~~av~~vl~~~ 249 (299)
.+++..++..++++.
T Consensus 329 ~~~~~~~i~~~~~~~ 343 (381)
T COG0438 329 VEELADALEQLLEDP 343 (381)
T ss_pred HHHHHHHHHHHhcCH
Confidence 899999999998875
No 153
>PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional
Probab=57.11 E-value=39 Score=30.65 Aligned_cols=132 Identities=11% Similarity=-0.003 Sum_probs=73.7
Q ss_pred CceEEEEeCC-c--cccCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCCCCChhhhhhhcCCeEEee--ccchh-hhhc
Q 022329 104 NSVVYVNYGS-I--TVMTEQHLTEFAWGLANSKRPFLWILRPDVVMGDSVVLPDEYFEEIKDRGFIVS--WCNQE-QVLS 177 (299)
Q Consensus 104 ~~vvyvs~GS-~--~~~~~~~~~~i~~al~~~~~~~lw~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~--w~pq~-~iL~ 177 (299)
++.|.+..|+ . -.++.+.+.++++.|.+.++++++..++.. +....+.+.+.. .++.+.+ -+.+. .+++
T Consensus 178 ~~~i~~~~~~s~~~k~Wp~e~~a~li~~l~~~~~~ivl~~G~~~----e~~~~~~i~~~~-~~~~l~g~~sL~elaali~ 252 (322)
T PRK10964 178 GPYLVFLHATTRDDKHWPEAHWRELIGLLAPSGLRIKLPWGAEH----EEQRAKRLAEGF-PYVEVLPKLSLEQVARVLA 252 (322)
T ss_pred CCeEEEEeCCCcccccCCHHHHHHHHHHHHHCCCeEEEeCCCHH----HHHHHHHHHccC-CcceecCCCCHHHHHHHHH
Confidence 4555444454 3 347889999999999777888765444321 000111111111 1222322 23344 3888
Q ss_pred CCCcCceeeccCchhhhhhhhcCcCeeeccCCcChH------hHHHHHHHHhCcEEEecCCCCHHHHHHHHHHHhc
Q 022329 178 HPSVGAFLTHCGWNSTMESICGGVPVICWPFFAEQQ------TNCRYACTTWGIGMEVNHDVKRGDIEALVKEMMD 247 (299)
Q Consensus 178 ~~~v~~~ItHgG~~s~~Eal~~GvP~i~~P~~~DQ~------~na~~v~~~~g~G~~l~~~~~~~~i~~av~~vl~ 247 (299)
++++ ||+. ..|.++=|.+.|+|+|++=--.|-. .|...+ .- .+..+. +++.+++.++++++|+
T Consensus 253 ~a~l--~I~n-DSGp~HlA~A~g~p~valfGpt~p~~~~p~~~~~~~~-~~--~~~cm~-~I~~e~V~~~~~~~l~ 321 (322)
T PRK10964 253 GAKA--VVSV-DTGLSHLTAALDRPNITLYGPTDPGLIGGYGKNQHAC-RS--PGKSMA-DLSAETVFQKLETLIS 321 (322)
T ss_pred hCCE--EEec-CCcHHHHHHHhCCCEEEEECCCCcccccCCCCCceee-cC--CCcccc-cCCHHHHHHHHHHHhh
Confidence 8888 8886 4677888999999999873222211 111111 10 011121 6899999999888764
No 154
>PRK10422 lipopolysaccharide core biosynthesis protein; Provisional
Probab=55.43 E-value=42 Score=30.94 Aligned_cols=98 Identities=10% Similarity=0.121 Sum_probs=60.0
Q ss_pred CCceEEEEeCCc---cccCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCCCCChhhhhhhc-CCeE-Eeec--cchh-h
Q 022329 103 ANSVVYVNYGSI---TVMTEQHLTEFAWGLANSKRPFLWILRPDVVMGDSVVLPDEYFEEIK-DRGF-IVSW--CNQE-Q 174 (299)
Q Consensus 103 ~~~vvyvs~GS~---~~~~~~~~~~i~~al~~~~~~~lw~~~~~~~~~~~~~l~~~~~~~~~-~~~~-v~~w--~pq~-~ 174 (299)
+++.|.+.-|+. -.++.+.+.++++.|.+.++++++..+.... +......+.+... .++. +.+- +.+. .
T Consensus 182 ~~~~i~i~pga~~~~K~Wp~e~fa~l~~~L~~~~~~vvl~ggp~e~---e~~~~~~i~~~~~~~~~~~l~g~~sL~el~a 258 (352)
T PRK10422 182 TQNYVVIQPTARQIFKCWDNDKFSAVIDALQARGYEVVLTSGPDKD---DLACVNEIAQGCQTPPVTALAGKTTFPELGA 258 (352)
T ss_pred CCCeEEEecCCCccccCCCHHHHHHHHHHHHHCCCeEEEEcCCChH---HHHHHHHHHHhcCCCccccccCCCCHHHHHH
Confidence 356777888876 3578899999999998778887766543210 0000011111111 1111 2222 2333 3
Q ss_pred hhcCCCcCceeeccCchhhhhhhhcCcCeeec
Q 022329 175 VLSHPSVGAFLTHCGWNSTMESICGGVPVICW 206 (299)
Q Consensus 175 iL~~~~v~~~ItHgG~~s~~Eal~~GvP~i~~ 206 (299)
+++++++ ||+. -.|-++=|.+.|+|+|++
T Consensus 259 li~~a~l--~v~n-DSGp~HlAaA~g~P~v~l 287 (352)
T PRK10422 259 LIDHAQL--FIGV-DSAPAHIAAAVNTPLICL 287 (352)
T ss_pred HHHhCCE--EEec-CCHHHHHHHHcCCCEEEE
Confidence 8888888 8886 567788888999999876
No 155
>PLN02470 acetolactate synthase
Probab=53.70 E-value=1.4e+02 Score=29.75 Aligned_cols=91 Identities=11% Similarity=0.063 Sum_probs=49.7
Q ss_pred EeCCccc--cCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCCCCChhhhhhh-c-CCeEEeeccc-h-------hhhhc
Q 022329 110 NYGSITV--MTEQHLTEFAWGLANSKRPFLWILRPDVVMGDSVVLPDEYFEEI-K-DRGFIVSWCN-Q-------EQVLS 177 (299)
Q Consensus 110 s~GS~~~--~~~~~~~~i~~al~~~~~~~lw~~~~~~~~~~~~~l~~~~~~~~-~-~~~~v~~w~p-q-------~~iL~ 177 (299)
+|||... ........+++.|++.|.+.++.+.+... ..+.+.+ . .++.++.--- + -.-..
T Consensus 2 ~~~~~~~~~~~~~~a~~l~~~L~~~GV~~vFg~pG~~~--------~~l~dal~~~~~i~~i~~rhE~~A~~~Adgyar~ 73 (585)
T PLN02470 2 TFQSRFAPDEPRKGADILVEALEREGVDTVFAYPGGAS--------MEIHQALTRSNCIRNVLCRHEQGEVFAAEGYAKA 73 (585)
T ss_pred CcccCCCCCccccHHHHHHHHHHHcCCCEEEEcCCccc--------HHHHHHHhccCCceEEEeccHHHHHHHHHHHHHH
Confidence 3555522 22233566777888888888777764421 1122222 1 1222221100 0 00112
Q ss_pred CCCcCceeeccCch------hhhhhhhcCcCeeeccC
Q 022329 178 HPSVGAFLTHCGWN------STMESICGGVPVICWPF 208 (299)
Q Consensus 178 ~~~v~~~ItHgG~~------s~~Eal~~GvP~i~~P~ 208 (299)
+..++++++|.|-| .+.+|...++|||++.-
T Consensus 74 tg~~gv~~~t~GPG~~N~l~gia~A~~~~~Pvl~I~G 110 (585)
T PLN02470 74 SGKVGVCIATSGPGATNLVTGLADALLDSVPLVAITG 110 (585)
T ss_pred hCCCEEEEECCCccHHHHHHHHHHHHhcCCcEEEEec
Confidence 23455689998854 78999999999999953
No 156
>COG3195 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=52.93 E-value=76 Score=26.20 Aligned_cols=75 Identities=19% Similarity=0.200 Sum_probs=52.7
Q ss_pred chhhhhhhhcCcCeeeccCCc--ChHhHHHHHHHHhCcEEEecC-CCCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHH
Q 022329 190 WNSTMESICGGVPVICWPFFA--EQQTNCRYACTTWGIGMEVNH-DVKRGDIEALVKEMMDGDEGKKMRQKAWEWKKKAE 266 (299)
Q Consensus 190 ~~s~~Eal~~GvP~i~~P~~~--DQ~~na~~v~~~~g~G~~l~~-~~~~~~i~~av~~vl~~~~~~~~r~~a~~l~~~~~ 266 (299)
.-|..|--.+|.=-+. |.-. =+..|+... +++|.=..+.. ..+.++|..+..+-|+|.+..+++..+.++...++
T Consensus 87 a~S~~EQasAGLd~Ls-~~E~a~f~~LN~aY~-~rFgfPfI~aVkg~~k~~Il~a~~~Rl~n~~e~E~~tAl~eI~rIA~ 164 (176)
T COG3195 87 AESTSEQASAGLDRLS-PEEFARFTELNAAYV-ERFGFPFIIAVKGNTKDTILAAFERRLDNDREQEFATALAEIERIAL 164 (176)
T ss_pred hhhHHHHHhcCcccCC-HHHHHHHHHHHHHHH-HhcCCceEEeecCCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHH
Confidence 3466666666653321 1111 135699998 99998777665 57899999999999998877788888887777754
No 157
>PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional
Probab=51.24 E-value=55 Score=30.03 Aligned_cols=96 Identities=9% Similarity=0.041 Sum_probs=58.9
Q ss_pred CCceEEEEeCCc----cccCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCCCCChhhhhhhcC----CeE-Eeec--cc
Q 022329 103 ANSVVYVNYGSI----TVMTEQHLTEFAWGLANSKRPFLWILRPDVVMGDSVVLPDEYFEEIKD----RGF-IVSW--CN 171 (299)
Q Consensus 103 ~~~vvyvs~GS~----~~~~~~~~~~i~~al~~~~~~~lw~~~~~~~~~~~~~l~~~~~~~~~~----~~~-v~~w--~p 171 (299)
+++.|.+.-|+. -.++.+.+.++++.|...++++++.-+... ......+.+..+. ++. +.+- +.
T Consensus 179 ~~~~i~i~pga~~~~~K~Wp~e~~a~l~~~l~~~~~~vvl~Gg~~e-----~~~~~~i~~~~~~~~~~~~~~l~g~~sL~ 253 (348)
T PRK10916 179 ERPIIGFCPGAEFGPAKRWPHYHYAELAQQLIDEGYQVVLFGSAKD-----HEAGNEILAALNTEQQAWCRNLAGETQLE 253 (348)
T ss_pred CCCEEEEeCCCCCccccCCCHHHHHHHHHHHHHCCCeEEEEeCHHh-----HHHHHHHHHhcccccccceeeccCCCCHH
Confidence 567888888874 347889999999999766778766533221 0011122112211 111 2221 23
Q ss_pred hh-hhhcCCCcCceeeccCchhhhhhhhcCcCeeec
Q 022329 172 QE-QVLSHPSVGAFLTHCGWNSTMESICGGVPVICW 206 (299)
Q Consensus 172 q~-~iL~~~~v~~~ItHgG~~s~~Eal~~GvP~i~~ 206 (299)
+. .+++++++ ||+. -.|-++=|.+.|+|+|++
T Consensus 254 el~ali~~a~l--~I~n-DTGp~HlAaA~g~P~val 286 (348)
T PRK10916 254 QAVILIAACKA--IVTN-DSGLMHVAAALNRPLVAL 286 (348)
T ss_pred HHHHHHHhCCE--EEec-CChHHHHHHHhCCCEEEE
Confidence 33 38888887 8875 567788899999999875
No 158
>cd07025 Peptidase_S66 LD-Carboxypeptidase, a serine protease, includes microcin C7 self immunity protein. LD-carboxypeptidase (Muramoyltetrapeptide carboxypeptidase; EC 3.4.17.13; Merops family S66; initially described as Carboxypeptidase II) family also includes the microcin c7 self-immunity protein (MccF) as well as uncharacterized proteins including hypothetical proteins. LD-carboxypeptidase hydrolyzes the amide bond that links the dibasic amino acids to C-terminal D-amino acids. The physiological substrates of LD-carboxypeptidase are tetrapeptide fragments (such as UDP-MurNAc-tetrapeptides) that are produced when bacterial cell walls are degraded; they contain an L-configured residue (L-lysine or meso-diaminopimelic acid residue) as the penultimate residue and D-alanine as the ultimate residue. A possible role of LD-carboxypeptidase is in peptidoglycan recycling whereby the resulting tripeptide (precursor for murein synthesis) can be reconverted into peptidoglycan by attachment o
Probab=51.03 E-value=26 Score=31.50 Aligned_cols=75 Identities=11% Similarity=0.246 Sum_probs=44.9
Q ss_pred cccCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCCCCChhhhhhhcCCeEEeeccchhhhhcCCCcCceeeccCchhhh
Q 022329 115 TVMTEQHLTEFAWGLANSKRPFLWILRPDVVMGDSVVLPDEYFEEIKDRGFIVSWCNQEQVLSHPSVGAFLTHCGWNSTM 194 (299)
Q Consensus 115 ~~~~~~~~~~i~~al~~~~~~~lw~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~w~pq~~iL~~~~v~~~ItHgG~~s~~ 194 (299)
+..+.+..+++.+++.+...+.||..++... -..+.++++...+-.+|+. ||=..-..+++
T Consensus 44 a~s~~~Ra~dL~~a~~d~~i~aI~~~rGG~g-----------------a~rlL~~ld~~~~~~~pK~--~iGySDiTaL~ 104 (282)
T cd07025 44 AGTDEERAADLNAAFADPEIKAIWCARGGYG-----------------ANRLLPYLDYDLIRANPKI--FVGYSDITALH 104 (282)
T ss_pred CCCHHHHHHHHHHHhhCCCCCEEEEcCCcCC-----------------HHHhhhhCCHHHHhhCCeE--EEEecHHHHHH
Confidence 4456788999999999999999999986521 1122233333333344444 55555555555
Q ss_pred hhhhc--CcCeeeccC
Q 022329 195 ESICG--GVPVICWPF 208 (299)
Q Consensus 195 Eal~~--GvP~i~~P~ 208 (299)
-++++ |++.+--|+
T Consensus 105 ~~l~~~~g~~t~hGp~ 120 (282)
T cd07025 105 LALYAKTGLVTFHGPM 120 (282)
T ss_pred HHHHHhcCceEEECcc
Confidence 55432 555555554
No 159
>PRK02797 4-alpha-L-fucosyltransferase; Provisional
Probab=49.93 E-value=96 Score=28.49 Aligned_cols=80 Identities=14% Similarity=0.085 Sum_probs=56.9
Q ss_pred CCeE-Eeeccchh---hhhcCCCcCceeec--cCchhhhhhhhcCcCeeeccCCcChHhHHHHHHHHhCcEEEecC-CCC
Q 022329 162 DRGF-IVSWCNQE---QVLSHPSVGAFLTH--CGWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNH-DVK 234 (299)
Q Consensus 162 ~~~~-v~~w~pq~---~iL~~~~v~~~ItH--gG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~-~~~ 234 (299)
+++. +++++|-. .+|+.++++.|+++ =|.|+++-.++.|+|+++--- -+.+.. + .+.|+-+..+. .++
T Consensus 206 ~~~~~L~e~l~f~eYl~lL~~~Dl~~f~~~RQQgiGnl~lLi~~G~~v~l~r~---n~fwqd-l-~e~gv~Vlf~~d~L~ 280 (322)
T PRK02797 206 ENFQILTEKLPFDDYLALLRQCDLGYFIFARQQGIGTLCLLIQLGKPVVLSRD---NPFWQD-L-TEQGLPVLFTGDDLD 280 (322)
T ss_pred ccEEehhhhCCHHHHHHHHHhCCEEEEeechhhHHhHHHHHHHCCCcEEEecC---CchHHH-H-HhCCCeEEecCCccc
Confidence 5766 46777755 49999999998886 589999999999999987542 233333 3 35577775554 677
Q ss_pred HHHHHHHHHHHh
Q 022329 235 RGDIEALVKEMM 246 (299)
Q Consensus 235 ~~~i~~av~~vl 246 (299)
...+.++=+++.
T Consensus 281 ~~~v~e~~rql~ 292 (322)
T PRK02797 281 EDIVREAQRQLA 292 (322)
T ss_pred HHHHHHHHHHHH
Confidence 777776655443
No 160
>COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=49.29 E-value=53 Score=30.13 Aligned_cols=95 Identities=14% Similarity=0.134 Sum_probs=59.4
Q ss_pred CceEEEEeC-Cc---cccCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCCCCChhhhhhhcCCeEEeec--cchh-hhh
Q 022329 104 NSVVYVNYG-SI---TVMTEQHLTEFAWGLANSKRPFLWILRPDVVMGDSVVLPDEYFEEIKDRGFIVSW--CNQE-QVL 176 (299)
Q Consensus 104 ~~vvyvs~G-S~---~~~~~~~~~~i~~al~~~~~~~lw~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~w--~pq~-~iL 176 (299)
++.|.++.| |. -..+.+.+.++++.+.+.++++++..+.. +....+.+.+..+..+.+.+- +.|. .++
T Consensus 175 ~~~i~i~pg~s~~~~K~wp~e~~~~l~~~l~~~~~~Vvl~g~~~-----e~e~~~~i~~~~~~~~~l~~k~sL~e~~~li 249 (334)
T COG0859 175 RPYIVINPGASRGSAKRWPLEHYAELAELLIAKGYQVVLFGGPD-----EEERAEEIAKGLPNAVILAGKTSLEELAALI 249 (334)
T ss_pred CCeEEEeccccccccCCCCHHHHHHHHHHHHHCCCEEEEecChH-----HHHHHHHHHHhcCCccccCCCCCHHHHHHHH
Confidence 578889888 43 45889999999999998887766655431 111111222222222213222 2333 367
Q ss_pred cCCCcCceeeccCchhhhhhhhcCcCeeec
Q 022329 177 SHPSVGAFLTHCGWNSTMESICGGVPVICW 206 (299)
Q Consensus 177 ~~~~v~~~ItHgG~~s~~Eal~~GvP~i~~ 206 (299)
.++++ ||+. -.|-++=|.+.|+|+|++
T Consensus 250 ~~a~l--~I~~-DSg~~HlAaA~~~P~I~i 276 (334)
T COG0859 250 AGADL--VIGN-DSGPMHLAAALGTPTIAL 276 (334)
T ss_pred hcCCE--EEcc-CChHHHHHHHcCCCEEEE
Confidence 77776 7764 566777788899999986
No 161
>COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane]
Probab=47.98 E-value=2.1e+02 Score=25.81 Aligned_cols=93 Identities=23% Similarity=0.274 Sum_probs=55.9
Q ss_pred CceEEE-EeCCc--cccCHHHHHHHH----HHHHcCCCCEEEEEcCCCCCCCCCCCChhhhhhhcCC-----eEE-----
Q 022329 104 NSVVYV-NYGSI--TVMTEQHLTEFA----WGLANSKRPFLWILRPDVVMGDSVVLPDEYFEEIKDR-----GFI----- 166 (299)
Q Consensus 104 ~~vvyv-s~GS~--~~~~~~~~~~i~----~al~~~~~~~lw~~~~~~~~~~~~~l~~~~~~~~~~~-----~~v----- 166 (299)
++.|-| --|+. ..+.++....++ +.+++.|-.|+.+..... |+.....++.| +.+
T Consensus 161 rq~vAVlVGg~nk~f~~~~d~a~q~~~~l~k~l~~~g~~~lisfSRRT--------p~~~~s~l~~~l~s~~~i~w~~~d 232 (329)
T COG3660 161 RQRVAVLVGGNNKAFVFQEDKAHQFASLLVKILENQGGSFLISFSRRT--------PDTVKSILKNNLNSSPGIVWNNED 232 (329)
T ss_pred CceEEEEecCCCCCCccCHHHHHHHHHHHHHHHHhCCceEEEEeecCC--------cHHHHHHHHhccccCceeEeCCCC
Confidence 444433 34444 345455555544 455678889988877542 23322222222 222
Q ss_pred eeccchhhhhcCCCcCceeeccC-chhhhhhhhcCcCeeec
Q 022329 167 VSWCNQEQVLSHPSVGAFLTHCG-WNSTMESICGGVPVICW 206 (299)
Q Consensus 167 ~~w~pq~~iL~~~~v~~~ItHgG-~~s~~Eal~~GvP~i~~ 206 (299)
.++=|+.++|+.++. +|.-.. .|-..||.+.|+|+-++
T Consensus 233 ~g~NPY~~~La~Ady--ii~TaDSinM~sEAasTgkPv~~~ 271 (329)
T COG3660 233 TGYNPYIDMLAAADY--IISTADSINMCSEAASTGKPVFIL 271 (329)
T ss_pred CCCCchHHHHhhcce--EEEecchhhhhHHHhccCCCeEEE
Confidence 256688999987776 665554 67789999999998654
No 162
>COG0801 FolK 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase [Coenzyme metabolism]
Probab=47.05 E-value=41 Score=27.68 Aligned_cols=35 Identities=17% Similarity=0.019 Sum_probs=26.3
Q ss_pred eEEEEeCCccccCHHHHHHHHHHHHcCCCCEEEEE
Q 022329 106 VVYVNYGSITVMTEQHLTEFAWGLANSKRPFLWIL 140 (299)
Q Consensus 106 vvyvs~GS~~~~~~~~~~~i~~al~~~~~~~lw~~ 140 (299)
.+|+|+||....+...++....+|.+.+..-++..
T Consensus 3 ~vyl~LGSNlgd~~~~l~~A~~~L~~~~~~~v~~~ 37 (160)
T COG0801 3 RVYLGLGSNLGDRLKQLRAALAALDALADIRVVAV 37 (160)
T ss_pred EEEEEecCCCCCHHHHHHHHHHHHHhCCCceEEEe
Confidence 58999999976667778888888887764334443
No 163
>cd07037 TPP_PYR_MenD Pyrimidine (PYR) binding domain of 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexadiene-1-carboxylate synthase (MenD) and related proteins. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexadiene-1-carboxylate (SEPHCHC) synthase (MenD) subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. The PYR and PP domains have a common fold, but do not share strong sequence conservation. The PP domain is not included in this sub-family. Most TPP-dependent enzymes have the PYR and PP domains on the same subunit although these domains can be alternatively arranged in the primary structure. TPP-dependent enzymes are multisubunit proteins, the smallest catalytic unit being a dim
Probab=42.36 E-value=58 Score=26.66 Aligned_cols=26 Identities=23% Similarity=0.415 Sum_probs=21.4
Q ss_pred ceeeccCch------hhhhhhhcCcCeeeccC
Q 022329 183 AFLTHCGWN------STMESICGGVPVICWPF 208 (299)
Q Consensus 183 ~~ItHgG~~------s~~Eal~~GvP~i~~P~ 208 (299)
++++|+|-| .+.+|...++|||++.-
T Consensus 63 v~~~t~GpG~~n~~~gl~~A~~~~~Pvl~i~g 94 (162)
T cd07037 63 AVVCTSGTAVANLLPAVVEAYYSGVPLLVLTA 94 (162)
T ss_pred EEEECCchHHHHHhHHHHHHHhcCCCEEEEEC
Confidence 388888744 67899999999999954
No 164
>PF00731 AIRC: AIR carboxylase; InterPro: IPR000031 Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. PurK, N5-carboxyaminoimidazole ribonucleotide (N5_CAIR) synthetase, catalyzes the conversion of 5-aminoimidazole ribonucleotide (AIR), ATP, and bicarbonate to N5-CAIR, ADP, and Pi. PurE converts N5-CAIR to CAIR, the sixth step of de novo purine biosynthesis. In the presence of high concentrations of bicarbonate, PurE is reported able to convert AIR to CAIR directly and without ATP. Some members of this family contain two copies of this domain []. The crystal structure of PurE indicates a unique quaternary structure that confirms the octameric nature of the enzyme [].; GO: 0004638 phosphoribosylaminoimidazole carboxylase activity, 0006189 'de novo' IMP biosynthetic process; PDB: 3TRH_O 2YWX_A 2NSL_A 1D7A_A 2NSJ_A 1QCZ_A 2ATE_A 2NSH_A 3RG8_C 3RGG_D ....
Probab=42.11 E-value=1.9e+02 Score=23.51 Aligned_cols=138 Identities=14% Similarity=0.164 Sum_probs=65.0
Q ss_pred eEEEEeCCccccCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCCCCChhhhhhhcCCeEEeeccchhhhhcCCCcCcee
Q 022329 106 VVYVNYGSITVMTEQHLTEFAWGLANSKRPFLWILRPDVVMGDSVVLPDEYFEEIKDRGFIVSWCNQEQVLSHPSVGAFL 185 (299)
Q Consensus 106 vvyvs~GS~~~~~~~~~~~i~~al~~~~~~~lw~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~w~pq~~iL~~~~v~~~I 185 (299)
.|-|-+||.. +...++++...|++.+..+-..+-+. ...|+.+.+-+ .-+.+..+++||
T Consensus 2 ~V~Ii~gs~S--D~~~~~~a~~~L~~~gi~~~~~V~sa------HR~p~~l~~~~-------------~~~~~~~~~viI 60 (150)
T PF00731_consen 2 KVAIIMGSTS--DLPIAEEAAKTLEEFGIPYEVRVASA------HRTPERLLEFV-------------KEYEARGADVII 60 (150)
T ss_dssp EEEEEESSGG--GHHHHHHHHHHHHHTT-EEEEEE--T------TTSHHHHHHHH-------------HHTTTTTESEEE
T ss_pred eEEEEeCCHH--HHHHHHHHHHHHHHcCCCEEEEEEec------cCCHHHHHHHH-------------HHhccCCCEEEE
Confidence 4666788875 56778888888888876554433311 11222222111 012222344588
Q ss_pred eccCchhhhhhhhc---CcCeeeccCCcChHhH----HHHHHHHhCcEEEecC-CCCHHHHHHHHHHHhcCChhHHHHHH
Q 022329 186 THCGWNSTMESICG---GVPVICWPFFAEQQTN----CRYACTTWGIGMEVNH-DVKRGDIEALVKEMMDGDEGKKMRQK 257 (299)
Q Consensus 186 tHgG~~s~~Eal~~---GvP~i~~P~~~DQ~~n----a~~v~~~~g~G~~l~~-~~~~~~i~~av~~vl~~~~~~~~r~~ 257 (299)
.=.|...-+-++.+ -.|+|.+|....+... ...+.--.|+++..-. + +...-.-..-++|.-. ..+++++
T Consensus 61 a~AG~~a~Lpgvva~~t~~PVIgvP~~~~~~~g~d~l~S~vqMp~g~pvatv~i~-~~~nAA~~A~~ILa~~-d~~l~~k 138 (150)
T PF00731_consen 61 AVAGMSAALPGVVASLTTLPVIGVPVSSGYLGGLDSLLSIVQMPSGVPVATVGIN-NGFNAALLAARILALK-DPELREK 138 (150)
T ss_dssp EEEESS--HHHHHHHHSSS-EEEEEE-STTTTTHHHHHHHHT--TTS--EE-SST-HHHHHHHHHHHHHHTT--HHHHHH
T ss_pred EECCCcccchhhheeccCCCEEEeecCcccccCcccHHHHHhccCCCCceEEEcc-CchHHHHHHHHHHhcC-CHHHHHH
Confidence 88886544333332 6799999987664421 1222112244433321 1 2233333333444311 1278888
Q ss_pred HHHHHHHHH
Q 022329 258 AWEWKKKAE 266 (299)
Q Consensus 258 a~~l~~~~~ 266 (299)
.+..+++.+
T Consensus 139 l~~~~~~~~ 147 (150)
T PF00731_consen 139 LRAYREKMK 147 (150)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 777777754
No 165
>PRK04885 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=42.10 E-value=63 Score=28.85 Aligned_cols=52 Identities=12% Similarity=0.118 Sum_probs=37.1
Q ss_pred CceeeccCchhhhhhhh------cCcCeeeccCCcChHhHHHHHHHHhCcEEEecCCCCHHHHHHHHHHHhcCC
Q 022329 182 GAFLTHCGWNSTMESIC------GGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVKRGDIEALVKEMMDGD 249 (299)
Q Consensus 182 ~~~ItHgG~~s~~Eal~------~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~i~~av~~vl~~~ 249 (299)
.++|+-||-||++.++. .++|++++... .+|..- +++.+++.+++.++++++
T Consensus 37 Dlvi~iGGDGT~L~a~~~~~~~~~~iPilGIN~G--------------~lGFL~--~~~~~~~~~~l~~i~~g~ 94 (265)
T PRK04885 37 DIVISVGGDGTLLSAFHRYENQLDKVRFVGVHTG--------------HLGFYT--DWRPFEVDKLVIALAKDP 94 (265)
T ss_pred CEEEEECCcHHHHHHHHHhcccCCCCeEEEEeCC--------------Cceecc--cCCHHHHHHHHHHHHcCC
Confidence 34999999999999975 47888887641 122222 457788888888888754
No 166
>cd07039 TPP_PYR_POX Pyrimidine (PYR) binding domain of POX. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of pyruvate oxidase (POX) subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. The PYR and PP domains have a common fold, but do not share strong sequence conservation. The PP domain is not included in this sub-family. Most TPP-dependent enzymes have the PYR and PP domains on the same subunit although these domains can be alternatively arranged in the primary structure. TPP-dependent enzymes are multisubunit proteins, the smallest catalytic unit being a dimer-of-active sites. Lactobacillus plantarum POX is a homotetramer (dimer-of-homodimers), having two active sites per homodimer lying between PYR and PP domains of differ
Probab=41.92 E-value=1.1e+02 Score=24.96 Aligned_cols=27 Identities=19% Similarity=0.198 Sum_probs=22.0
Q ss_pred CceeeccCch------hhhhhhhcCcCeeeccC
Q 022329 182 GAFLTHCGWN------STMESICGGVPVICWPF 208 (299)
Q Consensus 182 ~~~ItHgG~~------s~~Eal~~GvP~i~~P~ 208 (299)
+++++|.|-| ++.+|...++|||++.-
T Consensus 65 ~v~~~t~GpG~~n~~~~l~~A~~~~~Pvl~I~g 97 (164)
T cd07039 65 GVCLGSSGPGAIHLLNGLYDAKRDRAPVLAIAG 97 (164)
T ss_pred EEEEECCCCcHHHHHHHHHHHHhcCCCEEEEec
Confidence 3388888854 78999999999999963
No 167
>cd03412 CbiK_N Anaerobic cobalamin biosynthetic cobalt chelatase (CbiK), N-terminal domain. CbiK is part of the cobalt-early path for cobalamin biosynthesis. It catalyzes the insertion of cobalt into the oxidized form of precorrin-2, factor II (sirohydrochlorin), the second step of the anaerobic branch of vitamin B12 biosynthesis. CbiK belongs to the class II family of chelatases and is a homomeric enzyme that does not require ATP for its enzymatic activity.
Probab=41.22 E-value=50 Score=25.79 Aligned_cols=37 Identities=11% Similarity=0.298 Sum_probs=27.5
Q ss_pred ceEEEEeCCccccCHHHHHHHHHHHHc--CCCCEEEEEc
Q 022329 105 SVVYVNYGSITVMTEQHLTEFAWGLAN--SKRPFLWILR 141 (299)
Q Consensus 105 ~vvyvs~GS~~~~~~~~~~~i~~al~~--~~~~~lw~~~ 141 (299)
.+++++|||...-..+.+..+.+.+.+ .++.|-|.+-
T Consensus 2 aillv~fGS~~~~~~~~~~~i~~~l~~~~p~~~V~~aft 40 (127)
T cd03412 2 AILLVSFGTSYPTAEKTIDAIEDKVRAAFPDYEVRWAFT 40 (127)
T ss_pred eEEEEeCCCCCHHHHHHHHHHHHHHHHHCCCCeEEEEec
Confidence 589999999976555677888888853 3567777765
No 168
>cd07062 Peptidase_S66_mccF_like Microcin C7 self-immunity protein determines resistance to exogenous microcin C7. Microcin C7 self-immunity protein (mccF): MccF, a homolog of the LD-carboxypeptidase family, mediates resistance against exogenously added microcin C7 (MccC7), a ribosomally-encoded peptide antibiotic that contains a phosphoramidate linkage to adenosine monophosphate at its C-terminus. The plasmid-encoded mccF gene is transcribed in the opposite direction to the other five genes (mccA-E) and is required for the full expression of immunity but not for production. The catalytic triad residues (Ser, His, Glu) of LD-carboxypeptidase are also conserved in MccF, strongly suggesting that MccF shares the hydrolytic activity with LD-carboxypeptidases. Substrates of MccF have not been deduced, but could likely be microcin C7 precursors. The possible role of MccF is to defend producer cells against exogenous microcin from re-entering after having been exported. It is suggested that M
Probab=40.64 E-value=49 Score=30.14 Aligned_cols=75 Identities=12% Similarity=0.117 Sum_probs=44.5
Q ss_pred cccCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCCCCChhhhhhhcCCeEEeeccchhhhhcCCCcCceeeccCchhhh
Q 022329 115 TVMTEQHLTEFAWGLANSKRPFLWILRPDVVMGDSVVLPDEYFEEIKDRGFIVSWCNQEQVLSHPSVGAFLTHCGWNSTM 194 (299)
Q Consensus 115 ~~~~~~~~~~i~~al~~~~~~~lw~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~w~pq~~iL~~~~v~~~ItHgG~~s~~ 194 (299)
...+.+..+++.+++.+...+.||.+++... -..+.++++...+-.||++ ||=..-..+++
T Consensus 48 ag~~~~Ra~dL~~a~~Dp~i~aI~~~rGG~g-----------------~~rlL~~lD~~~i~~~PK~--fiGySDiTaL~ 108 (308)
T cd07062 48 SASPEERAEELMAAFADPSIKAIIPTIGGDD-----------------SNELLPYLDYELIKKNPKI--FIGYSDITALH 108 (308)
T ss_pred cCCHHHHHHHHHHHhcCCCCCEEEECCcccC-----------------HhhhhhhcCHHHHhhCCCE--EEeccHHHHHH
Confidence 3456788999999999999999999886521 1123333344444445544 55555555555
Q ss_pred hhhh--cCcCeeeccC
Q 022329 195 ESIC--GGVPVICWPF 208 (299)
Q Consensus 195 Eal~--~GvP~i~~P~ 208 (299)
-+++ +|++.+--|+
T Consensus 109 ~al~~~~g~~t~hGp~ 124 (308)
T cd07062 109 LAIYKKTGLVTYYGPN 124 (308)
T ss_pred HHHHHhcCCeEEECcc
Confidence 5553 2455544444
No 169
>PLN02929 NADH kinase
Probab=40.16 E-value=42 Score=30.63 Aligned_cols=64 Identities=13% Similarity=0.142 Sum_probs=44.0
Q ss_pred CceeeccCchhhhhhhh---cCcCeeeccCCc------ChHhHHHHHHHHhCcEEEecCCCCHHHHHHHHHHHhcCC
Q 022329 182 GAFLTHCGWNSTMESIC---GGVPVICWPFFA------EQQTNCRYACTTWGIGMEVNHDVKRGDIEALVKEMMDGD 249 (299)
Q Consensus 182 ~~~ItHgG~~s~~Eal~---~GvP~i~~P~~~------DQ~~na~~v~~~~g~G~~l~~~~~~~~i~~av~~vl~~~ 249 (299)
.++|+-||-||++.+.. .++|++++-... .++.|.-- +..-.|... .++.+++.+++.++++++
T Consensus 66 Dlvi~lGGDGT~L~aa~~~~~~iPvlGIN~Gp~~~~~~~~~~~~~~--~~r~lGfL~--~~~~~~~~~~L~~il~g~ 138 (301)
T PLN02929 66 DLVVAVGGDGTLLQASHFLDDSIPVLGVNSDPTQKDEVEEYSDEFD--ARRSTGHLC--AATAEDFEQVLDDVLFGR 138 (301)
T ss_pred CEEEEECCcHHHHHHHHHcCCCCcEEEEECCCcccccccccccccc--cccCccccc--cCCHHHHHHHHHHHHcCC
Confidence 33999999999998844 478999887642 23333321 222355444 468899999999999864
No 170
>cd06533 Glyco_transf_WecG_TagA The glycosyltransferase WecG/TagA superfamily contains Escherichia coli WecG, Bacillus subtilis TagA and related proteins. E. coli WecG is believed to be a UDP-N-acetyl-D-mannosaminuronic acid transferase, and is involved in enterobacterial common antigen (eca) synthesis. B. subtilis TagA plays a key role in the Wall Teichoic Acid (WTA) biosynthetic pathway, catalyzing the transfer of N-acetylmannosamine to the C4 hydroxyl of a membrane-anchored N-acetylglucosaminyl diphospholipid to make ManNAc-beta-(1,4)-GlcNAc-pp-undecaprenyl. This is the first committed step in this pathway. Also included in this group is Xanthomonas campestris pv. campestris GumM, a glycosyltransferase participating in the biosynthesis of the exopolysaccharide xanthan.
Probab=39.68 E-value=1e+02 Score=25.31 Aligned_cols=98 Identities=12% Similarity=0.166 Sum_probs=55.8
Q ss_pred HHHHHHhhcc--CccEEEEcCcccccHHHHHHHHhcCCcEEEeCCccCcchhhhhhhhhcCCCCCccccchhHHhhccCC
Q 022329 25 FLGSEAQNCF--KSSAIIFNTFDEFEHEALEVIASKFPNIYTVGPLPLLCKQVVEAKFRSFGSSLWKEDTDCLKWLDKRD 102 (299)
Q Consensus 25 ~~~~~~~~~~--~~~~~l~ns~~~le~~~~~~~r~~~p~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~ 102 (299)
++...++.+. .....++-+.++--....+..+...|++..+|-....... .++.++.+.+....
T Consensus 34 l~~~ll~~~~~~~~~v~llG~~~~~~~~~~~~l~~~yp~l~i~g~~~g~~~~--------------~~~~~i~~~I~~~~ 99 (171)
T cd06533 34 LMPALLELAAQKGLRVFLLGAKPEVLEKAAERLRARYPGLKIVGYHHGYFGP--------------EEEEEIIERINASG 99 (171)
T ss_pred HHHHHHHHHHHcCCeEEEECCCHHHHHHHHHHHHHHCCCcEEEEecCCCCCh--------------hhHHHHHHHHHHcC
Confidence 4444444442 4567888777666556556677788988888843322111 02233667777664
Q ss_pred CCceEEEEeCCccccCHHHHHHHHHHHHcCCCCEEEEEcC
Q 022329 103 ANSVVYVNYGSITVMTEQHLTEFAWGLANSKRPFLWILRP 142 (299)
Q Consensus 103 ~~~vvyvs~GS~~~~~~~~~~~i~~al~~~~~~~lw~~~~ 142 (299)
..+|+|++|+-.. +..+ .+.....+..++..++.
T Consensus 100 -pdiv~vglG~PkQ--E~~~---~~~~~~l~~~v~~~vG~ 133 (171)
T cd06533 100 -ADILFVGLGAPKQ--ELWI---ARHKDRLPVPVAIGVGG 133 (171)
T ss_pred -CCEEEEECCCCHH--HHHH---HHHHHHCCCCEEEEece
Confidence 3599999987521 1222 22223346676666664
No 171
>cd01840 SGNH_hydrolase_yrhL_like yrhL-like subfamily of SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Most members of this sub-family appear to co-occur with N-terminal acyltransferase domains. Might be involved in lipid metabolism.
Probab=39.65 E-value=92 Score=24.64 Aligned_cols=38 Identities=18% Similarity=0.239 Sum_probs=29.6
Q ss_pred CCceEEEEeCCccccCHHHHHHHHHHHHcCCCCEEEEEc
Q 022329 103 ANSVVYVNYGSITVMTEQHLTEFAWGLANSKRPFLWILR 141 (299)
Q Consensus 103 ~~~vvyvs~GS~~~~~~~~~~~i~~al~~~~~~~lw~~~ 141 (299)
...+|++++||......+.++.+++.+. .+.+++++..
T Consensus 50 ~~d~vvi~lGtNd~~~~~nl~~ii~~~~-~~~~ivlv~~ 87 (150)
T cd01840 50 LRKTVVIGLGTNGPFTKDQLDELLDALG-PDRQVYLVNP 87 (150)
T ss_pred CCCeEEEEecCCCCCCHHHHHHHHHHcC-CCCEEEEEEC
Confidence 4568999999997677888888988884 3577777654
No 172
>TIGR00661 MJ1255 conserved hypothetical protein. This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.
Probab=39.27 E-value=1.4e+02 Score=26.90 Aligned_cols=33 Identities=12% Similarity=0.339 Sum_probs=26.3
Q ss_pred hhcCCCcCceeeccCchhhhhhhhcCcCeeecc
Q 022329 175 VLSHPSVGAFLTHCGWNSTMESICGGVPVICWP 207 (299)
Q Consensus 175 iL~~~~v~~~ItHgG~~s~~Eal~~GvP~i~~P 207 (299)
++..-+-.++|++++..+..-|-..|+|.|.+-
T Consensus 88 ~l~~~~pDlVi~d~~~~~~~aA~~~~iP~i~i~ 120 (321)
T TIGR00661 88 IIREYNPDLIISDFEYSTVVAAKLLKIPVICIS 120 (321)
T ss_pred HHHhcCCCEEEECCchHHHHHHHhcCCCEEEEe
Confidence 444444455999999999999999999999654
No 173
>PF06180 CbiK: Cobalt chelatase (CbiK); InterPro: IPR010388 This group, typified by Salmonella typhimurium CbiK, contains anaerobic cobalt chelatases that act in the anaerobic cobalamin biosynthesis pathway [, ]. Cobalamin (vitamin B12) can be complexed with metal via ATP-dependent reactions (aerobic pathway) (e.g., in Pseudomonas denitrificans) or via ATP-independent reactions (anaerobic pathway) (e.g., in S. typhimurium) [, ]. The corresponding cobalt chelatases are not homologous. This group belongs to the class of ATP-independent, single-subunit chelatases that also includes distantly related protoporphyrin IX (PPIX) ferrochelatase (HemH) (Class II chelatases) []. The structure of S. typhimurium CbiK shows that it has a remarkably similar topology to Bacillus subtilis ferrochelatase despite only weak sequence conservation []. Both enzymes contain a histidine residue identified as the metal ion ligand, but CbiK contains a second histidine in place of the glutamic acid residue identified as a general base in PPIX ferrochelatase []. Site-directed mutagenesis has confirmed a role for this histidine and a nearby glutamic acid in cobalt binding, modulating metal ion specificity as well as catalytic efficiency []. It should be noted that CysG and Met8p, which are multifunctional proteins associated with siroheme biosynthesis, include chelatase activity and can therefore be considered as the third class of chelatases []. As with the class II chelatases, they do not require ATP for activity. However, they are not structurally similar to HemH or CbiK, and it is likely that they have arisen by the acquisition of a chelatase function within a dehydrogenase catalytic framework [, ].; GO: 0016852 sirohydrochlorin cobaltochelatase activity; PDB: 1QGO_A 2XWP_A 2XVZ_A 2XVX_A 2XVY_A.
Probab=38.09 E-value=41 Score=30.01 Aligned_cols=38 Identities=8% Similarity=0.181 Sum_probs=24.3
Q ss_pred ceEEEEeCCccccC-HHHHHHHHHHHHc--CCCCEEEEEcC
Q 022329 105 SVVYVNYGSITVMT-EQHLTEFAWGLAN--SKRPFLWILRP 142 (299)
Q Consensus 105 ~vvyvs~GS~~~~~-~~~~~~i~~al~~--~~~~~lw~~~~ 142 (299)
.++.+||||...-. ...+..+-+.+++ .++.|.|++.+
T Consensus 2 AIllvsFGTs~~~ar~~ti~~ie~~~~~~fp~~~V~~AfTS 42 (262)
T PF06180_consen 2 AILLVSFGTSYPEAREKTIDAIEKAVREAFPDYDVRRAFTS 42 (262)
T ss_dssp EEEEEE---S-CCCCHHHHHHHHHHHHHCSTTSEEEEEES-
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHHHHHHHCCCCcEEEEchH
Confidence 47899999985443 3477777777765 47899999874
No 174
>COG2159 Predicted metal-dependent hydrolase of the TIM-barrel fold [General function prediction only]
Probab=37.39 E-value=1.1e+02 Score=27.79 Aligned_cols=92 Identities=11% Similarity=0.007 Sum_probs=50.2
Q ss_pred hhHHhhccCCCCceEEEEeCCccccCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCCCCChhhhhhhcCCeEEeeccch
Q 022329 93 DCLKWLDKRDANSVVYVNYGSITVMTEQHLTEFAWGLANSKRPFLWILRPDVVMGDSVVLPDEYFEEIKDRGFIVSWCNQ 172 (299)
Q Consensus 93 ~~~~wl~~~~~~~vvyvs~GS~~~~~~~~~~~i~~al~~~~~~~lw~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~w~pq 172 (299)
++..+.....-.++-.-..........+.+..+.+++++.|..+++-++.... +.+.. . .....+.=.
T Consensus 117 E~er~v~~~gf~g~~l~p~~~~~~~~~~~~~pi~~~a~~~gvpv~ihtG~~~~-------~~~~~---~--~~~~p~~~~ 184 (293)
T COG2159 117 ELERRVRELGFVGVKLHPVAQGFYPDDPRLYPIYEAAEELGVPVVIHTGAGPG-------GAGLE---K--GHSDPLYLD 184 (293)
T ss_pred HHHHHHHhcCceEEEecccccCCCCCChHHHHHHHHHHHcCCCEEEEeCCCCC-------Ccccc---c--CCCCchHHH
Confidence 45555554333333332333334455666889999999999999997764311 00000 0 001111112
Q ss_pred hhhhcCCCcCceeeccC--chhhhhh
Q 022329 173 EQVLSHPSVGAFLTHCG--WNSTMES 196 (299)
Q Consensus 173 ~~iL~~~~v~~~ItHgG--~~s~~Ea 196 (299)
.-+-..|+++.++.|+| ..=..|+
T Consensus 185 ~va~~fP~l~IVl~H~G~~~p~~~~a 210 (293)
T COG2159 185 DVARKFPELKIVLGHMGEDYPWELEA 210 (293)
T ss_pred HHHHHCCCCcEEEEecCCCCchhHHH
Confidence 23556789999999999 4444444
No 175
>PF10093 DUF2331: Uncharacterized protein conserved in bacteria (DUF2331); InterPro: IPR016633 This entry describes a conserved hypothetical protein that typically is encoded next to the gene efp for translation elongation factor P. The function is unknown.
Probab=37.33 E-value=59 Score=30.58 Aligned_cols=96 Identities=14% Similarity=0.155 Sum_probs=57.8
Q ss_pred cCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCC-CCCC-----hhhhhhhcCCe--EEeeccchhh---hhcCCCcCcee
Q 022329 117 MTEQHLTEFAWGLANSKRPFLWILRPDVVMGDS-VVLP-----DEYFEEIKDRG--FIVSWCNQEQ---VLSHPSVGAFL 185 (299)
Q Consensus 117 ~~~~~~~~i~~al~~~~~~~lw~~~~~~~~~~~-~~l~-----~~~~~~~~~~~--~v~~w~pq~~---iL~~~~v~~~I 185 (299)
.+...+..+++++++.+.++...+........- ..+. .+-. ...++. .+.+|+||.. +|-.+++ .||
T Consensus 192 Ye~~~l~~ll~~~~~~~~pv~llvp~g~~~~~~~~~~~~~~~~~g~~-~~~g~l~l~~lPF~~Q~~yD~LLw~cD~-NfV 269 (374)
T PF10093_consen 192 YENAALASLLDAWAASPKPVHLLVPEGRALNSLAAWLGDALLQAGDS-WQRGNLTLHVLPFVPQDDYDRLLWACDF-NFV 269 (374)
T ss_pred CCchHHHHHHHHHhcCCCCeEEEecCCccHHHHHHHhccccccCccc-cccCCeEEEECCCCCHHHHHHHHHhCcc-ceE
Confidence 456668889999998888777666543211100 0011 0000 012443 4579999986 8888876 223
Q ss_pred eccCchhhhhhhhcCcCeeeccCCcChHhHHHH
Q 022329 186 THCGWNSTMESICGGVPVICWPFFAEQQTNCRY 218 (299)
Q Consensus 186 tHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~ 218 (299)
. |-=|+..|..+|+|+|=-. +=|..+|..
T Consensus 270 -R-GEDSfVRAqwAgkPFvWhI--YpQ~d~aHl 298 (374)
T PF10093_consen 270 -R-GEDSFVRAQWAGKPFVWHI--YPQEDDAHL 298 (374)
T ss_pred -e-cchHHHHHHHhCCCceEec--CcCchhhHH
Confidence 2 6779999999999997433 234455543
No 176
>PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3. Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D.
Probab=35.73 E-value=47 Score=33.28 Aligned_cols=93 Identities=13% Similarity=0.147 Sum_probs=52.4
Q ss_pred chhhhhcCCCcCceeeccC-ch-hhhhhhhcCcCeeeccCCc-ChHhHHH--HHHHHhCcEEEecCCCCHHHHHHHHHHH
Q 022329 171 NQEQVLSHPSVGAFLTHCG-WN-STMESICGGVPVICWPFFA-EQQTNCR--YACTTWGIGMEVNHDVKRGDIEALVKEM 245 (299)
Q Consensus 171 pq~~iL~~~~v~~~ItHgG-~~-s~~Eal~~GvP~i~~P~~~-DQ~~na~--~v~~~~g~G~~l~~~~~~~~i~~av~~v 245 (299)
|..+++.-+++++|-|-== || |-+||++.|||.|.-=+.+ -++.+-. .- ...|+-+.=++..+.++..+.+.+.
T Consensus 462 ~Y~dfv~GcdLgvFPSYYEPWGYTPlE~~a~gVPsITTnLsGFG~~~~~~~~~~-~~~GV~VvdR~~~n~~e~v~~la~~ 540 (633)
T PF05693_consen 462 DYYDFVRGCDLGVFPSYYEPWGYTPLECTAFGVPSITTNLSGFGCWMQEHIEDP-EEYGVYVVDRRDKNYDESVNQLADF 540 (633)
T ss_dssp -HHHHHHHSSEEEE--SSBSS-HHHHHHHHTT--EEEETTBHHHHHHHTTS-HH-GGGTEEEE-SSSS-HHHHHHHHHHH
T ss_pred CHHHHhccCceeeeccccccccCChHHHhhcCCceeeccchhHHHHHHHhhccC-cCCcEEEEeCCCCCHHHHHHHHHHH
Confidence 4455566666666655221 33 7899999999999988742 2333211 11 4567776666677777777777766
Q ss_pred hcC------ChhHHHHHHHHHHHHH
Q 022329 246 MDG------DEGKKMRQKAWEWKKK 264 (299)
Q Consensus 246 l~~------~~~~~~r~~a~~l~~~ 264 (299)
|-+ .+....|.+|.++++.
T Consensus 541 l~~f~~~~~rqri~~Rn~ae~LS~~ 565 (633)
T PF05693_consen 541 LYKFCQLSRRQRIIQRNRAERLSDL 565 (633)
T ss_dssp HHHHHT--HHHHHHHHHHHHHHGGG
T ss_pred HHHHHhCCHHHHHHHHHHHHHHHHh
Confidence 632 1233577777777766
No 177
>PF03808 Glyco_tran_WecB: Glycosyl transferase WecB/TagA/CpsF family; InterPro: IPR004629 The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in Enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.; GO: 0009058 biosynthetic process
Probab=35.38 E-value=1.3e+02 Score=24.61 Aligned_cols=88 Identities=11% Similarity=0.151 Sum_probs=54.4
Q ss_pred CccEEEEcCcccccHHHHHHHHhcCCcEEEeCCccCcchhhhhhhhhcCCCCCccccchhHHhhccCCCCceEEEEeCCc
Q 022329 35 KSSAIIFNTFDEFEHEALEVIASKFPNIYTVGPLPLLCKQVVEAKFRSFGSSLWKEDTDCLKWLDKRDANSVVYVNYGSI 114 (299)
Q Consensus 35 ~~~~~l~ns~~~le~~~~~~~r~~~p~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~vvyvs~GS~ 114 (299)
.....|+-+.++.-......++...|++..||-....-.. .+++.+.+.+.... ..+|++++|+-
T Consensus 48 ~~~ifllG~~~~~~~~~~~~l~~~yP~l~ivg~~~g~f~~--------------~~~~~i~~~I~~~~-pdiv~vglG~P 112 (172)
T PF03808_consen 48 GKRIFLLGGSEEVLEKAAANLRRRYPGLRIVGYHHGYFDE--------------EEEEAIINRINASG-PDIVFVGLGAP 112 (172)
T ss_pred CCeEEEEeCCHHHHHHHHHHHHHHCCCeEEEEecCCCCCh--------------hhHHHHHHHHHHcC-CCEEEEECCCC
Confidence 3478888887766666667888888998888854432111 14456777787764 35999999875
Q ss_pred cccCHHHHHHHHHHHHcCCCCEEEEEcC
Q 022329 115 TVMTEQHLTEFAWGLANSKRPFLWILRP 142 (299)
Q Consensus 115 ~~~~~~~~~~i~~al~~~~~~~lw~~~~ 142 (299)
- +-.-+.+-....+..++..++.
T Consensus 113 k-----QE~~~~~~~~~l~~~v~i~vG~ 135 (172)
T PF03808_consen 113 K-----QERWIARHRQRLPAGVIIGVGG 135 (172)
T ss_pred H-----HHHHHHHHHHHCCCCEEEEECc
Confidence 2 1122233334566675555553
No 178
>cd07035 TPP_PYR_POX_like Pyrimidine (PYR) binding domain of POX and related proteins. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of pyruvate oxidase (POX) and related protiens subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. A polar interaction between the conserved glutamate of the PYR domain and the N1' of the TPP aminopyrimidine ring is shared by most TPP-dependent enzymes, and participates in the activation of TPP. For glyoxylate carboligase, which belongs to this subfamily, but lacks this conserved glutamate, the rate of the initial TPP activation step is reduced but the ensuing steps of the enzymic reaction proceed efficiently. The PYR and PP domains have a common fold, but do not share strong sequence conservatio
Probab=34.73 E-value=1.4e+02 Score=23.52 Aligned_cols=26 Identities=12% Similarity=0.171 Sum_probs=20.9
Q ss_pred ceeeccCc------hhhhhhhhcCcCeeeccC
Q 022329 183 AFLTHCGW------NSTMESICGGVPVICWPF 208 (299)
Q Consensus 183 ~~ItHgG~------~s~~Eal~~GvP~i~~P~ 208 (299)
++++|.|- +.+.+|...++|+|++.-
T Consensus 62 v~~~~~gpG~~n~~~~l~~A~~~~~Pll~i~~ 93 (155)
T cd07035 62 VVLVTSGPGLTNAVTGLANAYLDSIPLLVITG 93 (155)
T ss_pred EEEEcCCCcHHHHHHHHHHHHhhCCCEEEEeC
Confidence 38888664 477899999999999964
No 179
>PRK04539 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=34.26 E-value=1.2e+02 Score=27.63 Aligned_cols=54 Identities=13% Similarity=0.137 Sum_probs=39.7
Q ss_pred CCCcCceeeccCchhhhhhhh----cCcCeeeccCCcChHhHHHHHHHHhCcEEEecCCCCHHHHHHHHHHHhcCC
Q 022329 178 HPSVGAFLTHCGWNSTMESIC----GGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVKRGDIEALVKEMMDGD 249 (299)
Q Consensus 178 ~~~v~~~ItHgG~~s~~Eal~----~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~i~~av~~vl~~~ 249 (299)
.+++ +|+=||-||++.+.. .++|++++-.. .+|..- +++.+++.+++.++++++
T Consensus 68 ~~D~--vi~lGGDGT~L~aa~~~~~~~~PilGIN~G--------------~lGFL~--~~~~~~~~~~l~~i~~g~ 125 (296)
T PRK04539 68 YCDL--VAVLGGDGTFLSVAREIAPRAVPIIGINQG--------------HLGFLT--QIPREYMTDKLLPVLEGK 125 (296)
T ss_pred CCCE--EEEECCcHHHHHHHHHhcccCCCEEEEecC--------------CCeEee--ccCHHHHHHHHHHHHcCC
Confidence 3455 999999999999864 37888887542 133333 468899999999998764
No 180
>cd07038 TPP_PYR_PDC_IPDC_like Pyrimidine (PYR) binding domain of pyruvate decarboxylase (PDC), indolepyruvate decarboxylase (IPDC) and related proteins. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of pyruvate decarboxylase (PDC) and indolepyruvate decarboxylase (IPDC) subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. The PYR and PP domains have a common fold, but do not share strong sequence conservation. The PP domain is not included in this sub-family. Most TPP-dependent enzymes have the PYR and PP domains on the same subunit although these domains can be alternatively arranged in the primary structure. TPP-dependent enzymes are multisubunit proteins, the smallest catalytic unit being a dimer-of-active sites, for many
Probab=34.19 E-value=1.1e+02 Score=24.81 Aligned_cols=28 Identities=29% Similarity=0.341 Sum_probs=21.5
Q ss_pred cCceeeccCc------hhhhhhhhcCcCeeeccC
Q 022329 181 VGAFLTHCGW------NSTMESICGGVPVICWPF 208 (299)
Q Consensus 181 v~~~ItHgG~------~s~~Eal~~GvP~i~~P~ 208 (299)
.+++++|.|- +.+.+|...++|||++.-
T Consensus 60 ~gv~~~t~GpG~~n~~~gl~~A~~~~~Pvl~i~g 93 (162)
T cd07038 60 LGALVTTYGVGELSALNGIAGAYAEHVPVVHIVG 93 (162)
T ss_pred CEEEEEcCCccHHHHHHHHHHHHHcCCCEEEEec
Confidence 3337777764 477899999999999964
No 181
>PRK02155 ppnK NAD(+)/NADH kinase family protein; Provisional
Probab=34.10 E-value=86 Score=28.37 Aligned_cols=54 Identities=19% Similarity=0.276 Sum_probs=38.2
Q ss_pred CCCcCceeeccCchhhhhhhhc----CcCeeeccCCcChHhHHHHHHHHhCcEEEecCCCCHHHHHHHHHHHhcCC
Q 022329 178 HPSVGAFLTHCGWNSTMESICG----GVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVKRGDIEALVKEMMDGD 249 (299)
Q Consensus 178 ~~~v~~~ItHgG~~s~~Eal~~----GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~i~~av~~vl~~~ 249 (299)
.+++ +|+-||-||+++++.. ++|++++-.. . +|... +++.+++.+++.++++++
T Consensus 63 ~~d~--vi~~GGDGt~l~~~~~~~~~~~pilGIn~G------------~--lGFL~--~~~~~~~~~~l~~~~~g~ 120 (291)
T PRK02155 63 RADL--AVVLGGDGTMLGIGRQLAPYGVPLIGINHG------------R--LGFIT--DIPLDDMQETLPPMLAGN 120 (291)
T ss_pred CCCE--EEEECCcHHHHHHHHHhcCCCCCEEEEcCC------------C--ccccc--cCCHHHHHHHHHHHHcCC
Confidence 3455 9999999999999763 6787776531 1 23222 467888888888888764
No 182
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=33.59 E-value=1.8e+02 Score=24.63 Aligned_cols=142 Identities=9% Similarity=0.019 Sum_probs=71.4
Q ss_pred CCceEEEEeCCccccCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCCCCChhhhhhhc-CCeEEeeccchhhhhcCCCc
Q 022329 103 ANSVVYVNYGSITVMTEQHLTEFAWGLANSKRPFLWILRPDVVMGDSVVLPDEYFEEIK-DRGFIVSWCNQEQVLSHPSV 181 (299)
Q Consensus 103 ~~~vvyvs~GS~~~~~~~~~~~i~~al~~~~~~~lw~~~~~~~~~~~~~l~~~~~~~~~-~~~~v~~w~pq~~iL~~~~v 181 (299)
.+.++.|.-|.++ ...+..|.+.+..+.++-. . +.+.+.+..+ +.+.......+..-+..+++
T Consensus 10 ~k~vLVIGgG~va-------~~ka~~Ll~~ga~V~VIs~-~--------~~~~l~~l~~~~~i~~~~~~~~~~~l~~adl 73 (202)
T PRK06718 10 NKRVVIVGGGKVA-------GRRAITLLKYGAHIVVISP-E--------LTENLVKLVEEGKIRWKQKEFEPSDIVDAFL 73 (202)
T ss_pred CCEEEEECCCHHH-------HHHHHHHHHCCCeEEEEcC-C--------CCHHHHHHHhCCCEEEEecCCChhhcCCceE
Confidence 4567877776664 3345556666777655432 1 1222222222 23444443334445666665
Q ss_pred CceeeccCchhhhhhhh----cCcCeeeccCCcChHhHH-----HHHHHHhCcEEEecC----CCCHHHHHHHHHHHhcC
Q 022329 182 GAFLTHCGWNSTMESIC----GGVPVICWPFFAEQQTNC-----RYACTTWGIGMEVNH----DVKRGDIEALVKEMMDG 248 (299)
Q Consensus 182 ~~~ItHgG~~s~~Eal~----~GvP~i~~P~~~DQ~~na-----~~v~~~~g~G~~l~~----~~~~~~i~~av~~vl~~ 248 (299)
+|.--+.-.+.+.++ .++++-+ .|.+..+ ..+ ..-++-+.+.. ..-+..+++.|.+++ .
T Consensus 74 --ViaaT~d~elN~~i~~~a~~~~lvn~----~d~~~~~~f~~Pa~~-~~g~l~iaIsT~G~sP~la~~lr~~ie~~~-~ 145 (202)
T PRK06718 74 --VIAATNDPRVNEQVKEDLPENALFNV----ITDAESGNVVFPSAL-HRGKLTISVSTDGASPKLAKKIRDELEALY-D 145 (202)
T ss_pred --EEEcCCCHHHHHHHHHHHHhCCcEEE----CCCCccCeEEEeeEE-EcCCeEEEEECCCCChHHHHHHHHHHHHHc-c
Confidence 777666655555543 3444322 2332222 222 22233333332 133355666666666 3
Q ss_pred ChhHHHHHHHHHHHHHHHHH
Q 022329 249 DEGKKMRQKAWEWKKKAEAA 268 (299)
Q Consensus 249 ~~~~~~r~~a~~l~~~~~~~ 268 (299)
+++..+-+.+.++++.+++.
T Consensus 146 ~~~~~~~~~~~~~R~~~k~~ 165 (202)
T PRK06718 146 ESYESYIDFLYECRQKIKEL 165 (202)
T ss_pred hhHHHHHHHHHHHHHHHHHh
Confidence 44667777777888877653
No 183
>PRK14075 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=32.90 E-value=1.3e+02 Score=26.59 Aligned_cols=52 Identities=10% Similarity=0.221 Sum_probs=36.6
Q ss_pred CceeeccCchhhhhhhh-cCcCeeeccCCcChHhHHHHHHHHhCcEEEecCCCCHHHHHHHHHHHhcCC
Q 022329 182 GAFLTHCGWNSTMESIC-GGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVKRGDIEALVKEMMDGD 249 (299)
Q Consensus 182 ~~~ItHgG~~s~~Eal~-~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~i~~av~~vl~~~ 249 (299)
.++|+=||-||++.++. .++|++++-... +|... +++.+++.+++.++++++
T Consensus 43 d~vi~iGGDGT~L~a~~~~~~Pilgin~G~--------------lGfl~--~~~~~~~~~~l~~~~~g~ 95 (256)
T PRK14075 43 DLIIVVGGDGTVLKAAKKVGTPLVGFKAGR--------------LGFLS--SYTLEEIDRFLEDLKNWN 95 (256)
T ss_pred CEEEEECCcHHHHHHHHHcCCCEEEEeCCC--------------Ccccc--ccCHHHHHHHHHHHHcCC
Confidence 34999999999998876 477777665311 22222 467788888888888754
No 184
>PRK03372 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=32.78 E-value=1.1e+02 Score=28.03 Aligned_cols=52 Identities=19% Similarity=0.296 Sum_probs=38.7
Q ss_pred CceeeccCchhhhhhhh----cCcCeeeccCCcChHhHHHHHHHHhCcEEEecCCCCHHHHHHHHHHHhcCC
Q 022329 182 GAFLTHCGWNSTMESIC----GGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVKRGDIEALVKEMMDGD 249 (299)
Q Consensus 182 ~~~ItHgG~~s~~Eal~----~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~i~~av~~vl~~~ 249 (299)
.++|+=||-||++.+.. .++|++++.+. .+|... ++..+++.+++.++++++
T Consensus 74 D~vi~lGGDGT~L~aar~~~~~~~PilGIN~G--------------~lGFL~--~~~~~~~~~~l~~i~~g~ 129 (306)
T PRK03372 74 ELVLVLGGDGTILRAAELARAADVPVLGVNLG--------------HVGFLA--EAEAEDLDEAVERVVDRD 129 (306)
T ss_pred CEEEEEcCCHHHHHHHHHhccCCCcEEEEecC--------------CCceec--cCCHHHHHHHHHHHHcCC
Confidence 34999999999999865 37888887652 123333 467888999999998764
No 185
>PRK01911 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=32.64 E-value=1.1e+02 Score=27.83 Aligned_cols=54 Identities=17% Similarity=0.375 Sum_probs=39.3
Q ss_pred CCCcCceeeccCchhhhhhhh----cCcCeeeccCCcChHhHHHHHHHHhCcEEEecCCCCHHHHHHHHHHHhcCC
Q 022329 178 HPSVGAFLTHCGWNSTMESIC----GGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVKRGDIEALVKEMMDGD 249 (299)
Q Consensus 178 ~~~v~~~ItHgG~~s~~Eal~----~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~i~~av~~vl~~~ 249 (299)
.+++ +|+=||-||++.+.. .++|++++-+.. +|..- +++.+++.+++.++++++
T Consensus 64 ~~dl--vi~lGGDGT~L~aa~~~~~~~~PilGIN~G~--------------lGFLt--~~~~~~~~~~l~~i~~g~ 121 (292)
T PRK01911 64 SADM--VISIGGDGTFLRTATYVGNSNIPILGINTGR--------------LGFLA--TVSKEEIEETIDELLNGD 121 (292)
T ss_pred CCCE--EEEECCcHHHHHHHHHhcCCCCCEEEEecCC--------------CCccc--ccCHHHHHHHHHHHHcCC
Confidence 3455 999999999998876 377888776521 22222 567889999999998764
No 186
>PRK14077 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=32.59 E-value=96 Score=28.03 Aligned_cols=54 Identities=11% Similarity=0.131 Sum_probs=37.5
Q ss_pred CCCcCceeeccCchhhhhhhh----cCcCeeeccCCcChHhHHHHHHHHhCcEEEecCCCCHHHHHHHHHHHhcCC
Q 022329 178 HPSVGAFLTHCGWNSTMESIC----GGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVKRGDIEALVKEMMDGD 249 (299)
Q Consensus 178 ~~~v~~~ItHgG~~s~~Eal~----~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~i~~av~~vl~~~ 249 (299)
.+++ +|+-||-||++.+.. .++|++++-.. . +|..- +++.+++.+++.++++++
T Consensus 64 ~~Dl--vi~iGGDGT~L~aa~~~~~~~~PilGIN~G------------~--lGFLt--~~~~~~~~~~l~~i~~g~ 121 (287)
T PRK14077 64 ISDF--LISLGGDGTLISLCRKAAEYDKFVLGIHAG------------H--LGFLT--DITVDEAEKFFQAFFQGE 121 (287)
T ss_pred CCCE--EEEECCCHHHHHHHHHhcCCCCcEEEEeCC------------C--cccCC--cCCHHHHHHHHHHHHcCC
Confidence 4455 999999999997755 36788776542 1 22211 467888888888888764
No 187
>PRK10353 3-methyl-adenine DNA glycosylase I; Provisional
Probab=32.42 E-value=1.4e+02 Score=25.26 Aligned_cols=45 Identities=7% Similarity=-0.040 Sum_probs=33.4
Q ss_pred eccCCcChHhHHHHHHHHhCcEEEecC-------------CCCHHHHH----HHHHHHhcCC
Q 022329 205 CWPFFAEQQTNCRYACTTWGIGMEVNH-------------DVKRGDIE----ALVKEMMDGD 249 (299)
Q Consensus 205 ~~P~~~DQ~~na~~v~~~~g~G~~l~~-------------~~~~~~i~----~av~~vl~~~ 249 (299)
+.|.+.||..--..+-|...+|+.-.. .++.+.+. +.|.++|.|+
T Consensus 22 G~P~~dd~~LFE~L~Le~~QAGLSW~tIL~Kre~fr~aF~~Fd~~~VA~~~e~die~Ll~d~ 83 (187)
T PRK10353 22 GVPETDSKKLFEMICLEGQQAGLSWITVLKKRENYRACFHQFDPVKVAAMQEEDVERLVQDA 83 (187)
T ss_pred CCcCCCcHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHcCCCHHHHhCCCHHHHHHHhcCc
Confidence 567799999987777688889987643 36666664 6677888876
No 188
>PRK15062 hydrogenase isoenzymes formation protein HypD; Provisional
Probab=32.39 E-value=2.7e+02 Score=26.08 Aligned_cols=91 Identities=14% Similarity=0.204 Sum_probs=52.8
Q ss_pred hhhcCCC--cCceeeccCchhhhhhhhcCcCeeeccCCcChHhHHHHHHHHhCcEEEecCCCCHHHHHHHHHHHhcCChh
Q 022329 174 QVLSHPS--VGAFLTHCGWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVKRGDIEALVKEMMDGDEG 251 (299)
Q Consensus 174 ~iL~~~~--v~~~ItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~i~~av~~vl~~~~~ 251 (299)
.+|..+. +.+||.-|--.++.-+ . .+.... +++|+-..+. -+.+.+|..+|..++.
T Consensus 177 ~ll~~~~~~idgfi~PGHVstI~G~---------------~-~y~~l~-~~y~~P~VVa-GFEp~DiL~ai~~lv~---- 234 (364)
T PRK15062 177 ALLEDPELRIDGFIAPGHVSTIIGT---------------E-PYEFLA-EEYGIPVVVA-GFEPLDILQSILMLVR---- 234 (364)
T ss_pred HHHcCCCCCccEEEecCEeEEEecc---------------c-hhHHHH-HHcCCCeEEe-ccCHHHHHHHHHHHHH----
Confidence 3666654 6778776644443311 1 122333 7788888776 5888888888887764
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhc
Q 022329 252 KKMRQKAWEWKKKAEAATAVGGQSYNNFDRLVKMVLQQ 289 (299)
Q Consensus 252 ~~~r~~a~~l~~~~~~~~~~gg~s~~~l~~li~~l~~~ 289 (299)
.+.+.-.++.....+++...|...+ .++|+++.+.
T Consensus 235 -q~~~g~~~v~N~Y~r~V~~eGN~~A--~~~i~~vFe~ 269 (364)
T PRK15062 235 -QLEEGRAEVENQYTRVVKEEGNLKA--QELIAEVFEV 269 (364)
T ss_pred -HHHCCCceEEEccceeeCcccCHHH--HHHHHHHcCc
Confidence 2222223333333444556666555 7777777664
No 189
>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase. Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise.
Probab=32.02 E-value=5e+02 Score=25.45 Aligned_cols=108 Identities=10% Similarity=0.037 Sum_probs=66.1
Q ss_pred eEEeeccchhh---hhcCCCcCceee---ccCchhh-hhhhhcCc----CeeeccCCcChHhHHHHHHHHhCcEEEecCC
Q 022329 164 GFIVSWCNQEQ---VLSHPSVGAFLT---HCGWNST-MESICGGV----PVICWPFFAEQQTNCRYACTTWGIGMEVNHD 232 (299)
Q Consensus 164 ~~v~~w~pq~~---iL~~~~v~~~It---HgG~~s~-~Eal~~Gv----P~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~ 232 (299)
+++.+.+|+.. ++..+++ ++. .-|+|-+ .|.++++. |+|.--+. -|. +.+.-++.++ .
T Consensus 364 ~~~~~~v~~~el~alYr~ADV--~lvT~lrDGmNLVa~Eyva~~~~~~GvLILSefa-----Gaa---~~l~~AllVN-P 432 (487)
T TIGR02398 364 QFFTRSLPYEEVSAWFAMADV--MWITPLRDGLNLVAKEYVAAQGLLDGVLVLSEFA-----GAA---VELKGALLTN-P 432 (487)
T ss_pred EEEcCCCCHHHHHHHHHhCCE--EEECccccccCcchhhHHhhhcCCCCCEEEeccc-----cch---hhcCCCEEEC-C
Confidence 35667788776 5666776 432 3477744 69999877 54443332 221 3445577887 5
Q ss_pred CCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHh
Q 022329 233 VKRGDIEALVKEMMDGDEGKKMRQKAWEWKKKAEAATAVGGQSYNNFDRLVKMVLQ 288 (299)
Q Consensus 233 ~~~~~i~~av~~vl~~~~~~~~r~~a~~l~~~~~~~~~~gg~s~~~l~~li~~l~~ 288 (299)
.+.+++.++|.+.|+.+.. +-++|.+++.+.++ .. +...=...+++.|..
T Consensus 433 ~d~~~~A~ai~~AL~m~~~-Er~~R~~~l~~~v~---~~--d~~~W~~~fl~~l~~ 482 (487)
T TIGR02398 433 YDPVRMDETIYVALAMPKA-EQQARMREMFDAVN---YY--DVQRWADEFLAAVSP 482 (487)
T ss_pred CCHHHHHHHHHHHHcCCHH-HHHHHHHHHHHHHh---hC--CHHHHHHHHHHHhhh
Confidence 7999999999999987632 44555555555543 22 222223566666654
No 190
>PRK02649 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=31.49 E-value=79 Score=28.85 Aligned_cols=53 Identities=9% Similarity=0.236 Sum_probs=38.3
Q ss_pred cCceeeccCchhhhhhhhc----CcCeeeccCCcChHhHHHHHHHHhCcEEEecCCCCHHHHHHHHHHHhcCC
Q 022329 181 VGAFLTHCGWNSTMESICG----GVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVKRGDIEALVKEMMDGD 249 (299)
Q Consensus 181 v~~~ItHgG~~s~~Eal~~----GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~i~~av~~vl~~~ 249 (299)
+.++|+=||-||++.+... ++|++++-+. .+|..- +++.+++.+++.++++++
T Consensus 69 ~Dlvi~iGGDGTlL~aar~~~~~~iPilGIN~G--------------~lGFLt--~~~~~~~~~~l~~l~~g~ 125 (305)
T PRK02649 69 MKFAIVLGGDGTVLSAARQLAPCGIPLLTINTG--------------HLGFLT--EAYLNQLDEAIDQVLAGQ 125 (305)
T ss_pred cCEEEEEeCcHHHHHHHHHhcCCCCcEEEEeCC--------------CCcccc--cCCHHHHHHHHHHHHcCC
Confidence 3449999999999998664 7788887541 122222 467888999999988764
No 191
>PRK14092 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
Probab=30.80 E-value=1.2e+02 Score=24.92 Aligned_cols=31 Identities=23% Similarity=0.220 Sum_probs=21.8
Q ss_pred CCCceEEEEeCCccccCHHHHHHHHHHHHcC
Q 022329 102 DANSVVYVNYGSITVMTEQHLTEFAWGLANS 132 (299)
Q Consensus 102 ~~~~vvyvs~GS~~~~~~~~~~~i~~al~~~ 132 (299)
+....+|+++||...-..+.++..+..|.+.
T Consensus 5 ~~~~~v~i~LGSNlg~~~~~l~~A~~~L~~~ 35 (163)
T PRK14092 5 PASALAYVGLGANLGDAAATLRSVLAELAAA 35 (163)
T ss_pred CcCCEEEEEecCchHhHHHHHHHHHHHHHhC
Confidence 3445789999999654566677777777664
No 192
>PF05225 HTH_psq: helix-turn-helix, Psq domain; InterPro: IPR007889 This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster []. In pipsqueak this domain binds to GAGA sequence []. The pipsqueak family, which includes proteins from fungi, sea urchins, nematodes, insects, and vertebrates appear to be proteins essential for sequence-specific targeting of a polycomb group protein complex [].; GO: 0003677 DNA binding; PDB: 2COB_A.
Probab=30.21 E-value=1.1e+02 Score=19.24 Aligned_cols=27 Identities=15% Similarity=0.387 Sum_probs=19.3
Q ss_pred CHHHHHHHHHHHhcCChhHHHHHHHHHHH
Q 022329 234 KRGDIEALVKEMMDGDEGKKMRQKAWEWK 262 (299)
Q Consensus 234 ~~~~i~~av~~vl~~~~~~~~r~~a~~l~ 262 (299)
+.++|.+||..+.++. .++++.|++..
T Consensus 1 tee~l~~Ai~~v~~g~--~S~r~AA~~yg 27 (45)
T PF05225_consen 1 TEEDLQKAIEAVKNGK--MSIRKAAKKYG 27 (45)
T ss_dssp -HHHHHHHHHHHHTTS--S-HHHHHHHHT
T ss_pred CHHHHHHHHHHHHhCC--CCHHHHHHHHC
Confidence 4689999999998763 37887777654
No 193
>TIGR03609 S_layer_CsaB polysaccharide pyruvyl transferase CsaB. The CsaB protein (cell surface anchoring B) of Bacillus anthracis adds a pyruvoyl group to peptidoglycan-associated polysaccharide. This addition is required for proteins with an S-layer homology domain (pfam00395) to bind. Within the larger group of proteins described by Pfam model pfam04230, this model represents a distinct clade that nearly exactly follows the phylogenetic distribution of the S-layer homology domain (pfam00395).
Probab=29.38 E-value=2.8e+02 Score=24.66 Aligned_cols=99 Identities=10% Similarity=0.179 Sum_probs=49.6
Q ss_pred CceEEEEeCCccccCHHHHHHHHHHHH----cCCCCEEEEEcCCCCCCCCCCCChhhhhhhcCCeEE-eeccchh--hhh
Q 022329 104 NSVVYVNYGSITVMTEQHLTEFAWGLA----NSKRPFLWILRPDVVMGDSVVLPDEYFEEIKDRGFI-VSWCNQE--QVL 176 (299)
Q Consensus 104 ~~vvyvs~GS~~~~~~~~~~~i~~al~----~~~~~~lw~~~~~~~~~~~~~l~~~~~~~~~~~~~v-~~w~pq~--~iL 176 (299)
++.|.+++........+..+.+++++. +.++++++.--... ........+.+.++.+..+ ...-|+. .++
T Consensus 172 ~~~i~i~~r~~~~~~~~~~~~l~~~l~~l~~~~g~~v~~i~~~~~---~D~~~~~~l~~~~~~~~~i~~~~~~~e~~~~i 248 (298)
T TIGR03609 172 EPVIVVSLRPWPLLDVSRLLRLLRALDRLQRDTGAFVLFLPFQQP---QDLPLARALRDQLLGPAEVLSPLDPEELLGLF 248 (298)
T ss_pred CCeEEEEECCCCcCCHHHHHHHHHHHHHHHHhhCCeEEEEeCCcc---hhHHHHHHHHHhcCCCcEEEecCCHHHHHHHH
Confidence 467777775532234433444444433 34788776542110 0001111222233332233 2222333 367
Q ss_pred cCCCcCceeeccCchhhhhhhhcCcCeeeccC
Q 022329 177 SHPSVGAFLTHCGWNSTMESICGGVPVICWPF 208 (299)
Q Consensus 177 ~~~~v~~~ItHgG~~s~~Eal~~GvP~i~~P~ 208 (299)
+++++ +|+-==+ ++.-|+.+|||.++++.
T Consensus 249 ~~~~~--vI~~RlH-~~I~A~~~gvP~i~i~y 277 (298)
T TIGR03609 249 ASARL--VIGMRLH-ALILAAAAGVPFVALSY 277 (298)
T ss_pred hhCCE--EEEechH-HHHHHHHcCCCEEEeec
Confidence 77776 7775433 45568889999998853
No 194
>PRK07710 acetolactate synthase catalytic subunit; Reviewed
Probab=29.34 E-value=2.4e+02 Score=27.91 Aligned_cols=27 Identities=11% Similarity=0.400 Sum_probs=22.1
Q ss_pred cCceeeccCch------hhhhhhhcCcCeeecc
Q 022329 181 VGAFLTHCGWN------STMESICGGVPVICWP 207 (299)
Q Consensus 181 v~~~ItHgG~~------s~~Eal~~GvP~i~~P 207 (299)
.+++++|.|-| .+.+|...++|+|++-
T Consensus 79 ~gv~~~t~GPG~~N~~~gl~~A~~~~~Pvl~It 111 (571)
T PRK07710 79 PGVVIATSGPGATNVVTGLADAMIDSLPLVVFT 111 (571)
T ss_pred CeEEEECCCccHHHHHHHHHHHhhcCCCEEEEe
Confidence 34488898855 6789999999999995
No 195
>KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=28.87 E-value=5e+02 Score=24.51 Aligned_cols=144 Identities=13% Similarity=0.204 Sum_probs=85.3
Q ss_pred CCceEEEEeCCccccCHHHHHHHHHHHHc---------CCC-CEEEEEcCCCCCCCCCCCChhhhhhhc----CCeE-Ee
Q 022329 103 ANSVVYVNYGSITVMTEQHLTEFAWGLAN---------SKR-PFLWILRPDVVMGDSVVLPDEYFEEIK----DRGF-IV 167 (299)
Q Consensus 103 ~~~vvyvs~GS~~~~~~~~~~~i~~al~~---------~~~-~~lw~~~~~~~~~~~~~l~~~~~~~~~----~~~~-v~ 167 (299)
+++.++||- .+.-+.+.+..+++|+.. .++ .++..+.+ .+.+-+.+.+.+. .++. ..
T Consensus 253 ~~pallvsS--TswTpDEdf~ILL~AL~~y~~~~~~~~~~lP~llciITG------KGPlkE~Y~~~I~~~~~~~v~~~t 324 (444)
T KOG2941|consen 253 ERPALLVSS--TSWTPDEDFGILLEALVIYEEQLYDKTHNLPSLLCIITG------KGPLKEKYSQEIHEKNLQHVQVCT 324 (444)
T ss_pred CCCeEEEec--CCCCCcccHHHHHHHHHhhhhhhhhccCCCCcEEEEEcC------CCchhHHHHHHHHHhcccceeeee
Confidence 567788873 333456677778888862 122 23333332 1233333333321 3444 36
Q ss_pred eccc---hhhhhcCCCcCceeeccCch-----hhhhhhhcCcCeeeccCCcChHhHHHHHHHHhCcEEEecCCCCHHHHH
Q 022329 168 SWCN---QEQVLSHPSVGAFLTHCGWN-----STMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVKRGDIE 239 (299)
Q Consensus 168 ~w~p---q~~iL~~~~v~~~ItHgG~~-----s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~i~ 239 (299)
.|+- ...+|+.+++++.+|-...| -+..-.-+|+|++.+-+- ---..| +.-.-|+... +.+++.
T Consensus 325 pWL~aEDYP~ll~saDlGVcLHtSSSGLDLPMKVVDMFGcglPvcA~~fk----cl~ELV-kh~eNGlvF~---Ds~eLa 396 (444)
T KOG2941|consen 325 PWLEAEDYPKLLASADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVNFK----CLDELV-KHGENGLVFE---DSEELA 396 (444)
T ss_pred cccccccchhHhhccccceEeeecCcccCcchhHHHhhcCCCceeeecch----hHHHHH-hcCCCceEec---cHHHHH
Confidence 8864 44589999998888766554 355667788888776541 112333 5555677776 889999
Q ss_pred HHHHHHhcC---C--hhHHHHHHHHHHH
Q 022329 240 ALVKEMMDG---D--EGKKMRQKAWEWK 262 (299)
Q Consensus 240 ~av~~vl~~---~--~~~~~r~~a~~l~ 262 (299)
+.+.-++.| + +..++++|+++-+
T Consensus 397 ~ql~~lf~~fp~~a~~l~~lkkn~~e~~ 424 (444)
T KOG2941|consen 397 EQLQMLFKNFPDNADELNQLKKNLREEQ 424 (444)
T ss_pred HHHHHHHhcCCCCHHHHHHHHHhhHHHH
Confidence 999888873 1 2335666666543
No 196
>PRK06276 acetolactate synthase catalytic subunit; Reviewed
Probab=28.82 E-value=4.3e+02 Score=26.27 Aligned_cols=27 Identities=22% Similarity=0.346 Sum_probs=21.9
Q ss_pred cCceeeccCc------hhhhhhhhcCcCeeecc
Q 022329 181 VGAFLTHCGW------NSTMESICGGVPVICWP 207 (299)
Q Consensus 181 v~~~ItHgG~------~s~~Eal~~GvP~i~~P 207 (299)
.+++++|.|- +++.+|.+.++|+|++.
T Consensus 64 ~gv~~~t~GPG~~n~l~~i~~A~~~~~Pvl~I~ 96 (586)
T PRK06276 64 VGVCVATSGPGATNLVTGIATAYADSSPVIALT 96 (586)
T ss_pred CEEEEECCCccHHHHHHHHHHHHhcCCCEEEEe
Confidence 3348888874 47899999999999994
No 197
>PRK08322 acetolactate synthase; Reviewed
Probab=28.70 E-value=2.1e+02 Score=28.14 Aligned_cols=27 Identities=22% Similarity=0.401 Sum_probs=22.1
Q ss_pred cCceeeccCc------hhhhhhhhcCcCeeecc
Q 022329 181 VGAFLTHCGW------NSTMESICGGVPVICWP 207 (299)
Q Consensus 181 v~~~ItHgG~------~s~~Eal~~GvP~i~~P 207 (299)
.+++++|.|- +++.+|...++|+|++.
T Consensus 64 ~gv~~~t~GpG~~N~~~~i~~A~~~~~Pll~i~ 96 (547)
T PRK08322 64 AGVCLSTLGPGATNLVTGVAYAQLGGMPMVAIT 96 (547)
T ss_pred CEEEEECCCccHhHHHHHHHHHhhcCCCEEEEe
Confidence 4448888874 47899999999999995
No 198
>PF08030 NAD_binding_6: Ferric reductase NAD binding domain; InterPro: IPR013121 This entry contains ferric reductase NAD binding proteins.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3A1F_A.
Probab=28.47 E-value=53 Score=25.98 Aligned_cols=39 Identities=21% Similarity=0.263 Sum_probs=28.9
Q ss_pred ceEEEEeCCccccCHHHHHHHHHHHH-----cCCCCEEEEEcCC
Q 022329 105 SVVYVNYGSITVMTEQHLTEFAWGLA-----NSKRPFLWILRPD 143 (299)
Q Consensus 105 ~vvyvs~GS~~~~~~~~~~~i~~al~-----~~~~~~lw~~~~~ 143 (299)
.+|+|+-|+........+..++.... .....|+|+++..
T Consensus 3 ~vvlvAGG~GIt~~l~~l~~l~~~~~~~~~~~~~i~lvW~vR~~ 46 (156)
T PF08030_consen 3 NVVLVAGGSGITPILPILRDLLQRQNRGSSRTRRIKLVWVVRDA 46 (156)
T ss_dssp EEEEEEEGGGHHHHHHHHHHHHHHHHTT-----EEEEEEEES-T
T ss_pred EEEEEecCcCHHHHHHHHHHHHHhhccccccccceEEEEeeCch
Confidence 48999999997766777777777776 2346899999954
No 199
>PLN02935 Bifunctional NADH kinase/NAD(+) kinase
Probab=28.36 E-value=1.1e+02 Score=30.08 Aligned_cols=53 Identities=13% Similarity=0.223 Sum_probs=37.9
Q ss_pred cCceeeccCchhhhhhhhc----CcCeeeccCCcChHhHHHHHHHHhCcEEEecCCCCHHHHHHHHHHHhcCC
Q 022329 181 VGAFLTHCGWNSTMESICG----GVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVKRGDIEALVKEMMDGD 249 (299)
Q Consensus 181 v~~~ItHgG~~s~~Eal~~----GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~i~~av~~vl~~~ 249 (299)
+.++|+=||-||++.+... ++|++++-+ -. +|..- +++.+++.+++.++++++
T Consensus 263 ~DlVIsiGGDGTlL~Aar~~~~~~iPILGIN~------------G~--LGFLt--~i~~~e~~~~Le~il~G~ 319 (508)
T PLN02935 263 VDLVITLGGDGTVLWAASMFKGPVPPVVPFSM------------GS--LGFMT--PFHSEQYRDCLDAILKGP 319 (508)
T ss_pred CCEEEEECCcHHHHHHHHHhccCCCcEEEEeC------------CC--cceec--ccCHHHHHHHHHHHHcCC
Confidence 4449999999999999663 567766532 11 33322 578899999999998864
No 200
>TIGR02329 propionate_PrpR propionate catabolism operon regulatory protein PrpR. At least five distinct pathways exists for the catabolism of propionate by way of propionyl-CoA. Members of this family represent the transcriptional regulatory protein PrpR, whose gene is found in most cases divergently transcribed from an operon for the methylcitric acid cycle of propionate catabolism. 2-methylcitric acid, a catabolite by this pathway, is a coactivator of PrpR.
Probab=27.40 E-value=1.7e+02 Score=29.00 Aligned_cols=29 Identities=14% Similarity=0.045 Sum_probs=23.8
Q ss_pred CcCceeeccCchhhhhhhhcCcCeeeccCC
Q 022329 180 SVGAFLTHCGWNSTMESICGGVPVICWPFF 209 (299)
Q Consensus 180 ~v~~~ItHgG~~s~~Eal~~GvP~i~~P~~ 209 (299)
.+.++|+.||...+...- ..+|+|-+++.
T Consensus 54 ~~dviIsrG~ta~~i~~~-~~iPVv~i~~s 82 (526)
T TIGR02329 54 RCDVVVAGGSNGAYLKSR-LSLPVIVIKPT 82 (526)
T ss_pred CCcEEEECchHHHHHHHh-CCCCEEEecCC
Confidence 345599999999998884 47999999984
No 201
>PF04558 tRNA_synt_1c_R1: Glutaminyl-tRNA synthetase, non-specific RNA binding region part 1 ; InterPro: IPR007639 The aminoacyl-tRNA synthetases (6.1.1. from EC) catalyse the attachment of an amino acid to its cognate transfer RNA molecule in a highly specific two-step reaction. These proteins differ widely in size and oligomeric state, and have limited sequence homology []. The 20 aminoacyl-tRNA synthetases are divided into two classes, I and II. Class I aminoacyl-tRNA synthetases contain a characteristic Rossman fold catalytic domain and are mostly monomeric []. Class II aminoacyl-tRNA synthetases share an anti-parallel beta-sheet fold flanked by alpha-helices [], and are mostly dimeric or multimeric, containing at least three conserved regions [, , ]. However, tRNA binding involves an alpha-helical structure that is conserved between class I and class II synthetases. In reactions catalysed by the class I aminoacyl-tRNA synthetases, the aminoacyl group is coupled to the 2'-hydroxyl of the tRNA, while, in class II reactions, the 3'-hydroxyl site is preferred. The synthetases specific for arginine, cysteine, glutamic acid, glutamine, isoleucine, leucine, methionine, tyrosine, tryptophan and valine belong to class I synthetases. The synthetases specific for alanine, asparagine, aspartic acid, glycine, histidine, lysine, phenylalanine, proline, serine, and threonine belong to class-II synthetases []. Based on their mode of binding to the tRNA acceptor stem, both classes of tRNA synthetases have been subdivided into three subclasses, designated 1a, 1b, 1c and 2a, 2b, 2c. This is a domain found N-terminal to the catalytic domain of glutaminyl-tRNA synthetase (6.1.1.18 from EC) in eukaryotes but not in Escherichia coli. This domain is thought to bind RNA in a non-specific manner, enhancing interactions between the tRNA and enzyme, but is not essential for enzyme function [].; GO: 0000166 nucleotide binding, 0004812 aminoacyl-tRNA ligase activity, 0005524 ATP binding, 0006418 tRNA aminoacylation for protein translation, 0005737 cytoplasm; PDB: 3TL4_X.
Probab=27.31 E-value=63 Score=26.65 Aligned_cols=27 Identities=26% Similarity=0.422 Sum_probs=19.4
Q ss_pred HHHHhCcEEEecCCCCHHHHHHHHHHHhcCC
Q 022329 219 ACTTWGIGMEVNHDVKRGDIEALVKEMMDGD 249 (299)
Q Consensus 219 v~~~~g~G~~l~~~~~~~~i~~av~~vl~~~ 249 (299)
+.+..|+|+.+ |+++|.++|.++++..
T Consensus 107 Fe~~cGVGV~V----T~E~I~~~V~~~i~~~ 133 (164)
T PF04558_consen 107 FEKACGVGVVV----TPEQIEAAVEKYIEEN 133 (164)
T ss_dssp HHHTTTTT--------HHHHHHHHHHHHHHT
T ss_pred HHHHcCCCeEE----CHHHHHHHHHHHHHHh
Confidence 34888999887 8999999999999743
No 202
>PRK15424 propionate catabolism operon regulatory protein PrpR; Provisional
Probab=26.91 E-value=1.8e+02 Score=28.93 Aligned_cols=29 Identities=21% Similarity=0.097 Sum_probs=24.0
Q ss_pred CcCceeeccCchhhhhhhhcCcCeeeccCC
Q 022329 180 SVGAFLTHCGWNSTMESICGGVPVICWPFF 209 (299)
Q Consensus 180 ~v~~~ItHgG~~s~~Eal~~GvP~i~~P~~ 209 (299)
.+.++|+.||....... +..+|+|-+++.
T Consensus 64 ~~dviIsrG~ta~~i~~-~~~iPVv~i~~s 92 (538)
T PRK15424 64 RCDAIIAAGSNGAYLKS-RLSVPVILIKPS 92 (538)
T ss_pred CCcEEEECchHHHHHHh-hCCCCEEEecCC
Confidence 34459999999999998 457999999984
No 203
>PRK03378 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=26.90 E-value=1.4e+02 Score=27.01 Aligned_cols=52 Identities=12% Similarity=0.136 Sum_probs=37.1
Q ss_pred CceeeccCchhhhhhhh----cCcCeeeccCCcChHhHHHHHHHHhCcEEEecCCCCHHHHHHHHHHHhcCC
Q 022329 182 GAFLTHCGWNSTMESIC----GGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVKRGDIEALVKEMMDGD 249 (299)
Q Consensus 182 ~~~ItHgG~~s~~Eal~----~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~i~~av~~vl~~~ 249 (299)
.++|+=||-||++.+.. .++|++++-.. . +|..- +++.+++.+++.+++++.
T Consensus 65 d~vi~lGGDGT~L~aa~~~~~~~~Pilgin~G------------~--lGFl~--~~~~~~~~~~l~~i~~g~ 120 (292)
T PRK03378 65 DLAIVVGGDGNMLGAARVLARYDIKVIGINRG------------N--LGFLT--DLDPDNALQQLSDVLEGH 120 (292)
T ss_pred CEEEEECCcHHHHHHHHHhcCCCCeEEEEECC------------C--CCccc--ccCHHHHHHHHHHHHcCC
Confidence 34999999999999974 36787776542 1 22211 456888999999998764
No 204
>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=26.49 E-value=40 Score=32.91 Aligned_cols=52 Identities=12% Similarity=0.184 Sum_probs=37.1
Q ss_pred hhhhhhhcCcCeeeccCCcChHhHHHHHHHHhCcEEEecCCCCHH---HHHHHHHHHhcCCh
Q 022329 192 STMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVKRG---DIEALVKEMMDGDE 250 (299)
Q Consensus 192 s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~---~i~~av~~vl~~~~ 250 (299)
++.||+++|.|+++.=-.+ =+..+ +..-.|..+++ +++ .+..++.++..|++
T Consensus 381 v~IEAMa~glPvvAt~~GG----P~EiV-~~~~tG~l~dp--~~e~~~~~a~~~~kl~~~p~ 435 (495)
T KOG0853|consen 381 VPIEAMACGLPVVATNNGG----PAEIV-VHGVTGLLIDP--GQEAVAELADALLKLRRDPE 435 (495)
T ss_pred eeHHHHhcCCCEEEecCCC----ceEEE-EcCCcceeeCC--chHHHHHHHHHHHHHhcCHH
Confidence 7899999999999874432 22333 44456777765 555 69999999998873
No 205
>PRK01231 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=25.87 E-value=1.4e+02 Score=27.12 Aligned_cols=51 Identities=22% Similarity=0.302 Sum_probs=37.9
Q ss_pred ceeeccCchhhhhhhh----cCcCeeeccCCcChHhHHHHHHHHhCcEEEecCCCCHHHHHHHHHHHhcCC
Q 022329 183 AFLTHCGWNSTMESIC----GGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVKRGDIEALVKEMMDGD 249 (299)
Q Consensus 183 ~~ItHgG~~s~~Eal~----~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~i~~av~~vl~~~ 249 (299)
.+|+=||-||+++++. .++|++++... .+|.. ..++.+++.+++.++++++
T Consensus 65 ~vi~~GGDGt~l~~~~~~~~~~~Pvlgin~G--------------~lGFl--~~~~~~~~~~~l~~~~~g~ 119 (295)
T PRK01231 65 LVIVVGGDGSLLGAARALARHNVPVLGINRG--------------RLGFL--TDIRPDELEFKLAEVLDGH 119 (295)
T ss_pred EEEEEeCcHHHHHHHHHhcCCCCCEEEEeCC--------------ccccc--ccCCHHHHHHHHHHHHcCC
Confidence 3999999999999864 36788877652 12322 1578899999999998764
No 206
>TIGR00118 acolac_lg acetolactate synthase, large subunit, biosynthetic type. Several isozymes of this enzyme are found in E. coli K12, one of which contains a frameshift in the large subunit gene and is not expressed.
Probab=25.23 E-value=6e+02 Score=25.00 Aligned_cols=27 Identities=19% Similarity=0.423 Sum_probs=22.0
Q ss_pred cCceeeccCc------hhhhhhhhcCcCeeecc
Q 022329 181 VGAFLTHCGW------NSTMESICGGVPVICWP 207 (299)
Q Consensus 181 v~~~ItHgG~------~s~~Eal~~GvP~i~~P 207 (299)
.+++++|.|- +++.+|...++|+|++-
T Consensus 65 ~gv~~~t~GpG~~n~l~~i~~A~~~~~Pvl~i~ 97 (558)
T TIGR00118 65 VGVVLVTSGPGATNLVTGIATAYMDSIPMVVFT 97 (558)
T ss_pred CEEEEECCCCcHHHHHHHHHHHHhcCCCEEEEe
Confidence 3348888874 47899999999999994
No 207
>PRK07525 sulfoacetaldehyde acetyltransferase; Validated
Probab=25.11 E-value=4.6e+02 Score=26.12 Aligned_cols=27 Identities=15% Similarity=0.244 Sum_probs=22.2
Q ss_pred cCceeeccCch------hhhhhhhcCcCeeecc
Q 022329 181 VGAFLTHCGWN------STMESICGGVPVICWP 207 (299)
Q Consensus 181 v~~~ItHgG~~------s~~Eal~~GvP~i~~P 207 (299)
.+++++|.|-| .+.+|...++|+|++.
T Consensus 69 ~gv~~~t~GPG~~n~~~gi~~A~~~~~Pvl~I~ 101 (588)
T PRK07525 69 MGMVIGQNGPGITNFVTAVATAYWAHTPVVLVT 101 (588)
T ss_pred CEEEEEcCCccHHHHHHHHHHHhhcCCCEEEEe
Confidence 44489998844 7789999999999996
No 208
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=24.94 E-value=4.3e+02 Score=22.38 Aligned_cols=145 Identities=12% Similarity=0.087 Sum_probs=70.6
Q ss_pred CCceEEEEeCCccccCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCCCCChhhhhhh-cCCeEEeeccchhhhhcCCCc
Q 022329 103 ANSVVYVNYGSITVMTEQHLTEFAWGLANSKRPFLWILRPDVVMGDSVVLPDEYFEEI-KDRGFIVSWCNQEQVLSHPSV 181 (299)
Q Consensus 103 ~~~vvyvs~GS~~~~~~~~~~~i~~al~~~~~~~lw~~~~~~~~~~~~~l~~~~~~~~-~~~~~v~~w~pq~~iL~~~~v 181 (299)
.+.++.|..|.++ ..-+..|.+.|..+.++-. . ..+++.+-. .+++....--.+...|....+
T Consensus 9 gk~vlVvGgG~va-------~rk~~~Ll~~ga~VtVvsp-~--------~~~~l~~l~~~~~i~~~~~~~~~~dl~~~~l 72 (205)
T TIGR01470 9 GRAVLVVGGGDVA-------LRKARLLLKAGAQLRVIAE-E--------LESELTLLAEQGGITWLARCFDADILEGAFL 72 (205)
T ss_pred CCeEEEECcCHHH-------HHHHHHHHHCCCEEEEEcC-C--------CCHHHHHHHHcCCEEEEeCCCCHHHhCCcEE
Confidence 3567777766654 2334555567777665433 1 112222211 134443221122344555555
Q ss_pred CceeeccCchhhhh-----hhhcCcCee--eccCCcChHhHHHHHHHHhCcEEEecC----CCCHHHHHHHHHHHhcCCh
Q 022329 182 GAFLTHCGWNSTME-----SICGGVPVI--CWPFFAEQQTNCRYACTTWGIGMEVNH----DVKRGDIEALVKEMMDGDE 250 (299)
Q Consensus 182 ~~~ItHgG~~s~~E-----al~~GvP~i--~~P~~~DQ~~na~~v~~~~g~G~~l~~----~~~~~~i~~av~~vl~~~~ 250 (299)
+|..-|...+.+ |-..|+|+- --|-..| +..-..+ ..-++-+.+.. ..-+..+++.|.+++.. +
T Consensus 73 --Vi~at~d~~ln~~i~~~a~~~~ilvn~~d~~e~~~-f~~pa~~-~~g~l~iaisT~G~sP~la~~lr~~ie~~l~~-~ 147 (205)
T TIGR01470 73 --VIAATDDEELNRRVAHAARARGVPVNVVDDPELCS-FIFPSIV-DRSPVVVAISSGGAAPVLARLLRERIETLLPP-S 147 (205)
T ss_pred --EEECCCCHHHHHHHHHHHHHcCCEEEECCCcccCe-EEEeeEE-EcCCEEEEEECCCCCcHHHHHHHHHHHHhcch-h
Confidence 777767654433 345677773 2333323 1222222 22223333433 23445677777777753 3
Q ss_pred hHHHHHHHHHHHHHHHHH
Q 022329 251 GKKMRQKAWEWKKKAEAA 268 (299)
Q Consensus 251 ~~~~r~~a~~l~~~~~~~ 268 (299)
+..+-+.+.+++..+++.
T Consensus 148 ~~~~~~~~~~~R~~~k~~ 165 (205)
T TIGR01470 148 LGDLATLAATWRDAVKKR 165 (205)
T ss_pred HHHHHHHHHHHHHHHHhh
Confidence 456667777777776543
No 209
>COG0299 PurN Folate-dependent phosphoribosylglycinamide formyltransferase PurN [Nucleotide transport and metabolism]
Probab=24.91 E-value=2.1e+02 Score=24.36 Aligned_cols=72 Identities=15% Similarity=0.173 Sum_probs=53.1
Q ss_pred HHHHHHHHHHHcCCCCEEEEEcCCCCCCCCCCCChhhhhhhcCCeEEeeccchhhhhcCCCcCceeeccCchhhhhhhhc
Q 022329 120 QHLTEFAWGLANSKRPFLWILRPDVVMGDSVVLPDEYFEEIKDRGFIVSWCNQEQVLSHPSVGAFLTHCGWNSTMESICG 199 (299)
Q Consensus 120 ~~~~~i~~al~~~~~~~lw~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~w~pq~~iL~~~~v~~~ItHgG~~s~~Eal~~ 199 (299)
..-.++.+.|.+.+..++...+ ....+.+.|.++.+++++ =-||++ .=.++|..+..+|+.+
T Consensus 66 ~~d~~l~~~l~~~~~dlvvLAG------yMrIL~~~fl~~~~grIl----------NIHPSL--LP~f~G~h~~~~A~~a 127 (200)
T COG0299 66 AFDRALVEALDEYGPDLVVLAG------YMRILGPEFLSRFEGRIL----------NIHPSL--LPAFPGLHAHEQALEA 127 (200)
T ss_pred HHHHHHHHHHHhcCCCEEEEcc------hHHHcCHHHHHHhhcceE----------ecCccc--ccCCCCchHHHHHHHc
Confidence 4456688888888888776554 245677888777655322 237888 8899999999999999
Q ss_pred CcCeeeccCC
Q 022329 200 GVPVICWPFF 209 (299)
Q Consensus 200 GvP~i~~P~~ 209 (299)
|+..-++-.+
T Consensus 128 G~k~sG~TVH 137 (200)
T COG0299 128 GVKVSGCTVH 137 (200)
T ss_pred CCCccCcEEE
Confidence 9987666543
No 210
>PRK08155 acetolactate synthase catalytic subunit; Validated
Probab=24.79 E-value=2e+02 Score=28.41 Aligned_cols=27 Identities=11% Similarity=0.345 Sum_probs=21.9
Q ss_pred cCceeeccCch------hhhhhhhcCcCeeecc
Q 022329 181 VGAFLTHCGWN------STMESICGGVPVICWP 207 (299)
Q Consensus 181 v~~~ItHgG~~------s~~Eal~~GvP~i~~P 207 (299)
.+++++|.|-| ++.+|...++|+|++.
T Consensus 77 ~gv~~~t~GpG~~N~l~gl~~A~~~~~Pvl~i~ 109 (564)
T PRK08155 77 PAVCMACSGPGATNLVTAIADARLDSIPLVCIT 109 (564)
T ss_pred CeEEEECCCCcHHHHHHHHHHHHhcCCCEEEEe
Confidence 33488887744 7899999999999995
No 211
>COG1609 PurR Transcriptional regulators [Transcription]
Probab=24.01 E-value=4.3e+02 Score=24.07 Aligned_cols=9 Identities=44% Similarity=0.401 Sum_probs=4.4
Q ss_pred cEEEEcCcc
Q 022329 37 SAIIFNTFD 45 (299)
Q Consensus 37 ~~~l~ns~~ 45 (299)
++++.|+..
T Consensus 90 ~~~l~~~~~ 98 (333)
T COG1609 90 SLLLANTDD 98 (333)
T ss_pred EEEEECCCC
Confidence 455555543
No 212
>PF08006 DUF1700: Protein of unknown function (DUF1700); InterPro: IPR012963 This family contains many hypothetical bacterial proteins and two putative membrane proteins (Q6GFD0 from SWISSPROT and Q6G806 from SWISSPROT).
Probab=23.34 E-value=3.2e+02 Score=22.48 Aligned_cols=43 Identities=5% Similarity=0.020 Sum_probs=24.9
Q ss_pred CHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHhcCCchH
Q 022329 234 KRGDIEALVKEMMDGDEGKKMRQKAWEWKKKAEAATAVGGQSY 276 (299)
Q Consensus 234 ~~~~i~~av~~vl~~~~~~~~r~~a~~l~~~~~~~~~~gg~s~ 276 (299)
|+++.-+.+++-|.+=..++.++......+.+.++..+|.+..
T Consensus 2 ~k~efL~~L~~~L~~lp~~e~~e~l~~Y~e~f~d~~~~G~sEe 44 (181)
T PF08006_consen 2 NKNEFLNELEKYLKKLPEEEREEILEYYEEYFDDAGEEGKSEE 44 (181)
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhhCCCCHH
Confidence 5566666666666542223566666667777766655554443
No 213
>PRK14076 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=23.09 E-value=1.3e+02 Score=30.03 Aligned_cols=53 Identities=15% Similarity=0.434 Sum_probs=38.8
Q ss_pred cCceeeccCchhhhhhhh----cCcCeeeccCCcChHhHHHHHHHHhCcEEEecCCCCHHHHHHHHHHHhcCC
Q 022329 181 VGAFLTHCGWNSTMESIC----GGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVKRGDIEALVKEMMDGD 249 (299)
Q Consensus 181 v~~~ItHgG~~s~~Eal~----~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~i~~av~~vl~~~ 249 (299)
+.++|+-||-||++.+.. .++|++++-+. . +|. +. +++.+++.+++.++++++
T Consensus 349 ~dlvi~lGGDGT~L~aa~~~~~~~~PilGin~G------------~--lGF-L~-~~~~~~~~~~l~~~~~g~ 405 (569)
T PRK14076 349 ISHIISIGGDGTVLRASKLVNGEEIPIICINMG------------T--VGF-LT-EFSKEEIFKAIDSIISGE 405 (569)
T ss_pred CCEEEEECCcHHHHHHHHHhcCCCCCEEEEcCC------------C--CCc-Cc-ccCHHHHHHHHHHHHcCC
Confidence 445999999999999866 37788877652 1 222 11 567889999999998764
No 214
>PF00289 CPSase_L_chain: Carbamoyl-phosphate synthase L chain, N-terminal domain; InterPro: IPR005481 Carbamoyl phosphate synthase (CPSase) is a heterodimeric enzyme composed of a small and a large subunit (with the exception of CPSase III, see below). CPSase catalyses the synthesis of carbamoyl phosphate from biocarbonate, ATP and glutamine (6.3.5.5 from EC) or ammonia (6.3.4.16 from EC), and represents the first committed step in pyrimidine and arginine biosynthesis in prokaryotes and eukaryotes, and in the urea cycle in most terrestrial vertebrates [, ]. CPSase has three active sites, one in the small subunit and two in the large subunit. The small subunit contains the glutamine binding site and catalyses the hydrolysis of glutamine to glutamate and ammonia. The large subunit has two homologous carboxy phosphate domains, both of which have ATP-binding sites; however, the N-terminal carboxy phosphate domain catalyses the phosphorylation of biocarbonate, while the C-terminal domain catalyses the phosphorylation of the carbamate intermediate []. The carboxy phosphate domain found duplicated in the large subunit of CPSase is also present as a single copy in the biotin-dependent enzymes acetyl-CoA carboxylase (6.4.1.2 from EC) (ACC), propionyl-CoA carboxylase (6.4.1.3 from EC) (PCCase), pyruvate carboxylase (6.4.1.1 from EC) (PC) and urea carboxylase (6.3.4.6 from EC). Most prokaryotes carry one form of CPSase that participates in both arginine and pyrimidine biosynthesis, however certain bacteria can have separate forms. The large subunit in bacterial CPSase has four structural domains: the carboxy phosphate domain 1, the oligomerisation domain, the carbamoyl phosphate domain 2 and the allosteric domain []. CPSase heterodimers from Escherichia coli contain two molecular tunnels: an ammonia tunnel and a carbamate tunnel. These inter-domain tunnels connect the three distinct active sites, and function as conduits for the transport of unstable reaction intermediates (ammonia and carbamate) between successive active sites []. The catalytic mechanism of CPSase involves the diffusion of carbamate through the interior of the enzyme from the site of synthesis within the N-terminal domain of the large subunit to the site of phosphorylation within the C-terminal domain. Eukaryotes have two distinct forms of CPSase: a mitochondrial enzyme (CPSase I) that participates in both arginine biosynthesis and the urea cycle; and a cytosolic enzyme (CPSase II) involved in pyrimidine biosynthesis. CPSase II occurs as part of a multi-enzyme complex along with aspartate transcarbamoylase and dihydroorotase; this complex is referred to as the CAD protein []. The hepatic expression of CPSase is transcriptionally regulated by glucocorticoids and/or cAMP []. There is a third form of the enzyme, CPSase III, found in fish, which uses glutamine as a nitrogen source instead of ammonia []. CPSase III is closely related to CPSase I, and is composed of a single polypeptide that may have arisen from gene fusion of the glutaminase and synthetase domains []. This entry represents the N-terminal domain of the large subunit of carbamoyl phosphate synthase. This domain can also be found in certain other related proteins. ; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 3VA7_A 3OUU_A 3OUZ_B 1W96_B 1W93_A 1ULZ_A 3HB9_C 3HO8_A 3BG5_C 3HBL_A ....
Probab=23.01 E-value=2.1e+02 Score=21.67 Aligned_cols=71 Identities=13% Similarity=0.120 Sum_probs=43.0
Q ss_pred HHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCCCCChhhhhhhcCCeEEee-------ccchhhhhcCC-CcCceeeccCc
Q 022329 119 EQHLTEFAWGLANSKRPFLWILRPDVVMGDSVVLPDEYFEEIKDRGFIVS-------WCNQEQVLSHP-SVGAFLTHCGW 190 (299)
Q Consensus 119 ~~~~~~i~~al~~~~~~~lw~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~-------w~pq~~iL~~~-~v~~~ItHgG~ 190 (299)
-+....+++++++.|++++.+...... . ...-+..+..+..+ |+....|+.-. .-++...|+|+
T Consensus 11 Geia~r~~ra~r~~Gi~tv~v~s~~d~------~--s~~~~~ad~~~~~~~~~~~~~yl~~e~I~~ia~~~g~~~i~pGy 82 (110)
T PF00289_consen 11 GEIAVRIIRALRELGIETVAVNSNPDT------V--STHVDMADEAYFEPPGPSPESYLNIEAIIDIARKEGADAIHPGY 82 (110)
T ss_dssp HHHHHHHHHHHHHTTSEEEEEEEGGGT------T--GHHHHHSSEEEEEESSSGGGTTTSHHHHHHHHHHTTESEEESTS
T ss_pred CHHHHHHHHHHHHhCCcceeccCchhc------c--cccccccccceecCcchhhhhhccHHHHhhHhhhhcCccccccc
Confidence 344677899999999999988874411 1 11112344555444 56555533211 11448899999
Q ss_pred hhhhhhh
Q 022329 191 NSTMESI 197 (299)
Q Consensus 191 ~s~~Eal 197 (299)
|-+.|..
T Consensus 83 g~lse~~ 89 (110)
T PF00289_consen 83 GFLSENA 89 (110)
T ss_dssp STTTTHH
T ss_pred chhHHHH
Confidence 9887763
No 215
>PRK08673 3-deoxy-7-phosphoheptulonate synthase; Reviewed
Probab=22.47 E-value=3.7e+02 Score=24.90 Aligned_cols=56 Identities=23% Similarity=0.246 Sum_probs=31.7
Q ss_pred hhcCCCcCceeeccCchhh----hh--------hh--hcCcCeeeccCCcC-h----HhHHHHHHHHhCc-EEEecC
Q 022329 175 VLSHPSVGAFLTHCGWNST----ME--------SI--CGGVPVICWPFFAE-Q----QTNCRYACTTWGI-GMEVNH 231 (299)
Q Consensus 175 iL~~~~v~~~ItHgG~~s~----~E--------al--~~GvP~i~~P~~~D-Q----~~na~~v~~~~g~-G~~l~~ 231 (299)
+.+.-+-.++++|||..|. .+ .+ ..+.|+|+.|-+.- + +.-++.. ..+|+ |+.+..
T Consensus 223 i~~~GN~~viL~erG~~tf~~~~~~~ldl~ai~~lk~~~~lPVi~d~sH~~G~~~~v~~~a~AA-vA~GAdGliIE~ 298 (335)
T PRK08673 223 ILAEGNPNVILCERGIRTFETATRNTLDLSAVPVIKKLTHLPVIVDPSHATGKRDLVEPLALAA-VAAGADGLIVEV 298 (335)
T ss_pred HHHcCCCeEEEEECCCCCCCCcChhhhhHHHHHHHHHhcCCCEEEeCCCCCccccchHHHHHHH-HHhCCCEEEEEe
Confidence 3333333449999987443 11 11 24799999997642 2 2334443 67787 566654
No 216
>PRK03501 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=22.32 E-value=2.1e+02 Score=25.56 Aligned_cols=52 Identities=8% Similarity=0.159 Sum_probs=36.1
Q ss_pred ceeeccCchhhhhhhhc-----CcCeeeccCCcChHhHHHHHHHHhCcEEEecCCCCHHHHHHHHHHHhcCC
Q 022329 183 AFLTHCGWNSTMESICG-----GVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVKRGDIEALVKEMMDGD 249 (299)
Q Consensus 183 ~~ItHgG~~s~~Eal~~-----GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~i~~av~~vl~~~ 249 (299)
++|+=||-||++.++.. .+|++++...+ .+|..- +++.+++.+++.++++++
T Consensus 42 ~vi~lGGDGT~L~a~~~~~~~~~~pilgIn~~G-------------~lGFL~--~~~~~~~~~~l~~i~~g~ 98 (264)
T PRK03501 42 IIVSIGGDGTFLQAVRKTGFREDCLYAGISTKD-------------QLGFYC--DFHIDDLDKMIQAITKEE 98 (264)
T ss_pred EEEEECCcHHHHHHHHHhcccCCCeEEeEecCC-------------CCeEcc--cCCHHHHHHHHHHHHcCC
Confidence 39999999999999864 55666554411 223221 567888888888888764
No 217
>PRK09107 acetolactate synthase 3 catalytic subunit; Validated
Probab=22.16 E-value=6.6e+02 Score=25.10 Aligned_cols=59 Identities=19% Similarity=0.316 Sum_probs=35.4
Q ss_pred eeeccCchhhhhh--hhcCcCeeeccCCcChHhHHHHHHHHhCc-EEEecCCCCHHHHHHHHHHHhc
Q 022329 184 FLTHCGWNSTMES--ICGGVPVICWPFFAEQQTNCRYACTTWGI-GMEVNHDVKRGDIEALVKEMMD 247 (299)
Q Consensus 184 ~ItHgG~~s~~Ea--l~~GvP~i~~P~~~DQ~~na~~v~~~~g~-G~~l~~~~~~~~i~~av~~vl~ 247 (299)
++..+|++.+... +.+|-+.-.. .....++.++.. +.+|+ |.++. +.++|.+++++.+.
T Consensus 481 V~NN~~y~~i~~~q~~~~~~~~~~~-~~~~~~d~~~lA-~a~G~~~~~v~---~~~el~~al~~a~~ 542 (595)
T PRK09107 481 ILNNQYMGMVRQWQQLLHGNRLSHS-YTEAMPDFVKLA-EAYGAVGIRCE---KPGDLDDAIQEMID 542 (595)
T ss_pred EEeCCccHHHHHHHHHHhCCccccc-cCCCCCCHHHHH-HHCCCeEEEEC---CHHHHHHHHHHHHh
Confidence 7888889877533 3334321111 111134566665 77764 45554 89999999999874
No 218
>PRK04761 ppnK inorganic polyphosphate/ATP-NAD kinase; Reviewed
Probab=22.13 E-value=70 Score=28.25 Aligned_cols=27 Identities=15% Similarity=0.159 Sum_probs=21.5
Q ss_pred CceeeccCchhhhhhhhc----CcCeeeccC
Q 022329 182 GAFLTHCGWNSTMESICG----GVPVICWPF 208 (299)
Q Consensus 182 ~~~ItHgG~~s~~Eal~~----GvP~i~~P~ 208 (299)
.++|+-||-||++.++.. ++|++++-.
T Consensus 27 Dlvi~iGGDGTlL~a~~~~~~~~~PvlGIN~ 57 (246)
T PRK04761 27 DVIVALGGDGFMLQTLHRYMNSGKPVYGMNR 57 (246)
T ss_pred CEEEEECCCHHHHHHHHHhcCCCCeEEEEeC
Confidence 349999999999988553 678887765
No 219
>COG3340 PepE Peptidase E [Amino acid transport and metabolism]
Probab=22.12 E-value=5.3e+02 Score=22.42 Aligned_cols=45 Identities=9% Similarity=0.126 Sum_probs=33.4
Q ss_pred hHHhhccCCCCceEEEEeCCccccCHHHHHHHHHHHHcCCCCEEEE
Q 022329 94 CLKWLDKRDANSVVYVNYGSITVMTEQHLTEFAWGLANSKRPFLWI 139 (299)
Q Consensus 94 ~~~wl~~~~~~~vvyvs~GS~~~~~~~~~~~i~~al~~~~~~~lw~ 139 (299)
+..++... .+.+.||=+-|...-....++...++|++.|+.+.-.
T Consensus 24 i~n~l~g~-~~~i~FIPtAs~~~~~~~Yv~k~~~~l~~lg~~v~~L 68 (224)
T COG3340 24 IANFLQGK-RKTIAFIPTASVDSEDDFYVEKVRNALAKLGLEVSEL 68 (224)
T ss_pred HHHHhcCC-CceEEEEecCccccchHHHHHHHHHHHHHcCCeeeee
Confidence 34444443 4579999998887666778999999999999876533
No 220
>PF06792 UPF0261: Uncharacterised protein family (UPF0261); InterPro: IPR008322 The proteins in this entry are functionally uncharacterised.
Probab=21.81 E-value=2.8e+02 Score=26.46 Aligned_cols=96 Identities=10% Similarity=0.068 Sum_probs=56.1
Q ss_pred CCCceEEEEeCCccccCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCCCCChhhhhhhc--CCeE-EeeccchhhhhcC
Q 022329 102 DANSVVYVNYGSITVMTEQHLTEFAWGLANSKRPFLWILRPDVVMGDSVVLPDEYFEEIK--DRGF-IVSWCNQEQVLSH 178 (299)
Q Consensus 102 ~~~~vvyvs~GS~~~~~~~~~~~i~~al~~~~~~~lw~~~~~~~~~~~~~l~~~~~~~~~--~~~~-v~~w~pq~~iL~~ 178 (299)
.++|.|-+|+ ...+...+..+.+.|++.||.++.-...... -..+ +++- +.+- |.+.-.... ..
T Consensus 183 ~~kp~I~iTm---fGvTTp~V~~~~~~Le~~G~Ev~VFHAtG~G-------G~aM-E~Li~~G~~~~VlDlTttEl--~d 249 (403)
T PF06792_consen 183 EDKPLIGITM---FGVTTPCVDAIRERLEEEGYEVLVFHATGTG-------GRAM-ERLIREGQFDGVLDLTTTEL--AD 249 (403)
T ss_pred CCCcEEEEEC---CCCcHHHHHHHHHHHHhcCCeEEEEcCCCCc-------hHHH-HHHHHcCCcEEEEECcHHHH--HH
Confidence 4577777653 2334466788888898889988765443210 0112 2221 2222 334433332 11
Q ss_pred CCcCceeeccCchhhhhhhhcCcCeeeccCCcC
Q 022329 179 PSVGAFLTHCGWNSTMESICGGVPVICWPFFAE 211 (299)
Q Consensus 179 ~~v~~~ItHgG~~s~~Eal~~GvP~i~~P~~~D 211 (299)
--++ =+..+|-.-+-.|...|+|+|+.|-..|
T Consensus 250 ~l~G-Gv~sagp~Rl~AA~~~GIP~Vvs~GalD 281 (403)
T PF06792_consen 250 ELFG-GVLSAGPDRLEAAARAGIPQVVSPGALD 281 (403)
T ss_pred HHhC-CCCCCCchHHHHHHHcCCCEEEecCccc
Confidence 1112 2667888899999999999999997544
No 221
>TIGR00173 menD 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase. 2-oxoglutarate decarboxylase/SHCHC synthase (menD) is a thiamine pyrophosphate enzyme involved in menaquinone biosynthesis.
Probab=21.56 E-value=1.9e+02 Score=27.50 Aligned_cols=25 Identities=28% Similarity=0.431 Sum_probs=20.9
Q ss_pred CceeeccCch------hhhhhhhcCcCeeec
Q 022329 182 GAFLTHCGWN------STMESICGGVPVICW 206 (299)
Q Consensus 182 ~~~ItHgG~~------s~~Eal~~GvP~i~~ 206 (299)
+++++|.|-| .+.+|.+.++|+|++
T Consensus 65 gv~~~t~GpG~~N~l~gl~~A~~~~~Pvl~i 95 (432)
T TIGR00173 65 VAVVCTSGTAVANLLPAVIEASYSGVPLIVL 95 (432)
T ss_pred EEEEECCcchHhhhhHHHHHhcccCCcEEEE
Confidence 3388888844 778999999999999
No 222
>cd03409 Chelatase_Class_II Class II Chelatase: a family of ATP-independent monomeric or homodimeric enzymes that catalyze the insertion of metal into protoporphyrin rings. This family includes protoporphyrin IX ferrochelatase (HemH), sirohydrochlorin ferrochelatase (SirB) and the cobaltochelatases, CbiK and CbiX. HemH and SirB are involved in heme and siroheme biosynthesis, respectively, while the cobaltochelatases are associated with cobalamin biosynthesis. Excluded from this family are the ATP-dependent heterotrimeric chelatases (class I) and the multifunctional homodimeric enzymes with dehydrogenase and chelatase activities (class III).
Probab=21.48 E-value=2.5e+02 Score=20.18 Aligned_cols=36 Identities=22% Similarity=0.219 Sum_probs=24.2
Q ss_pred eEEEEeCCccc-cCHHHHHHHHHHHHcC--CCCEEEEEc
Q 022329 106 VVYVNYGSITV-MTEQHLTEFAWGLANS--KRPFLWILR 141 (299)
Q Consensus 106 vvyvs~GS~~~-~~~~~~~~i~~al~~~--~~~~lw~~~ 141 (299)
+|++++||... .....+..+++.+++. +..+.+.+.
T Consensus 2 lllv~HGs~~~s~~~~~~~~~~~~l~~~~~~~~v~~a~~ 40 (101)
T cd03409 2 LLVVGHGSPYKDPYKKDIEAQAHNLAESLPDFPYYVGFQ 40 (101)
T ss_pred EEEEECCCCCCccHHHHHHHHHHHHHHHCCCCCEEEEEE
Confidence 78999999854 4456777788887643 345555544
No 223
>TIGR03457 sulphoacet_xsc sulfoacetaldehyde acetyltransferase. Members of this protein family are sulfoacetaldehyde acetyltransferase, an enzyme of taurine utilization. Taurine, or 2-aminoethanesulfonate, can be used by bacteria as a source of carbon, nitrogen, and sulfur.
Probab=21.43 E-value=5.3e+02 Score=25.57 Aligned_cols=27 Identities=11% Similarity=0.166 Sum_probs=22.1
Q ss_pred cCceeeccCch------hhhhhhhcCcCeeecc
Q 022329 181 VGAFLTHCGWN------STMESICGGVPVICWP 207 (299)
Q Consensus 181 v~~~ItHgG~~------s~~Eal~~GvP~i~~P 207 (299)
.+++++|.|-| .+.+|...++|+|++.
T Consensus 65 ~gv~~~t~GPG~~N~~~gla~A~~~~~Pvl~I~ 97 (579)
T TIGR03457 65 MSMVIGQNGPGVTNCVTAIAAAYWAHTPVVIVT 97 (579)
T ss_pred CEEEEECCCchHHHHHHHHHHHhhcCCCEEEEe
Confidence 34488888855 6789999999999995
No 224
>PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long). This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall
Probab=21.13 E-value=6.9e+02 Score=23.42 Aligned_cols=81 Identities=11% Similarity=0.090 Sum_probs=60.2
Q ss_pred CCeE-Eeeccchhh---hhcCCCcCceeec--cCchhhhhhhhcCcCeeeccCCcChHhHHHHHHHHhCcEEEecC-CCC
Q 022329 162 DRGF-IVSWCNQEQ---VLSHPSVGAFLTH--CGWNSTMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNH-DVK 234 (299)
Q Consensus 162 ~~~~-v~~w~pq~~---iL~~~~v~~~ItH--gG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~-~~~ 234 (299)
+++. +.+++|-.+ +|+.++++.|.+. -|.|++.-.++.|+|++.-- +-+.+- -+ .+.|+-+.... +++
T Consensus 245 ~~~~iL~e~mpf~eYl~lL~~cDl~if~~~RQQgiGnI~lLl~~G~~v~L~~---~np~~~-~l-~~~~ipVlf~~d~L~ 319 (360)
T PF07429_consen 245 ENFQILTEFMPFDEYLALLSRCDLGIFNHNRQQGIGNICLLLQLGKKVFLSR---DNPFWQ-DL-KEQGIPVLFYGDELD 319 (360)
T ss_pred cceeEhhhhCCHHHHHHHHHhCCEEEEeechhhhHhHHHHHHHcCCeEEEec---CChHHH-HH-HhCCCeEEeccccCC
Confidence 4665 467887554 9999999888764 68999999999999997643 223333 34 45587776664 789
Q ss_pred HHHHHHHHHHHhc
Q 022329 235 RGDIEALVKEMMD 247 (299)
Q Consensus 235 ~~~i~~av~~vl~ 247 (299)
...|.++=+++.+
T Consensus 320 ~~~v~ea~rql~~ 332 (360)
T PF07429_consen 320 EALVREAQRQLAN 332 (360)
T ss_pred HHHHHHHHHHHhh
Confidence 9999988888765
No 225
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.
Probab=21.09 E-value=3.8e+02 Score=24.74 Aligned_cols=35 Identities=26% Similarity=0.345 Sum_probs=26.8
Q ss_pred eEEEEeCCccccCHHHHHHHHHHHHcCCCCEEEEEcC
Q 022329 106 VVYVNYGSITVMTEQHLTEFAWGLANSKRPFLWILRP 142 (299)
Q Consensus 106 vvyvs~GS~~~~~~~~~~~i~~al~~~~~~~lw~~~~ 142 (299)
++++++|+.+.. .-+..++++|.+.|++|.+....
T Consensus 3 Il~~~~p~~GHv--~P~l~la~~L~~rGh~V~~~t~~ 37 (401)
T cd03784 3 VLITTIGSRGDV--QPLVALAWALRAAGHEVRVATPP 37 (401)
T ss_pred EEEEeCCCcchH--HHHHHHHHHHHHCCCeEEEeeCH
Confidence 778889887543 34567888888899998888764
No 226
>TIGR01162 purE phosphoribosylaminoimidazole carboxylase, PurE protein. Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. This model represents PurK, an N5-CAIR mutase.
Probab=20.81 E-value=3.2e+02 Score=22.33 Aligned_cols=80 Identities=15% Similarity=0.164 Sum_probs=42.2
Q ss_pred EEeCCccccCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCCCCChhhhhhhcCCeEEeeccchhhhhcCCCcCceeecc
Q 022329 109 VNYGSITVMTEQHLTEFAWGLANSKRPFLWILRPDVVMGDSVVLPDEYFEEIKDRGFIVSWCNQEQVLSHPSVGAFLTHC 188 (299)
Q Consensus 109 vs~GS~~~~~~~~~~~i~~al~~~~~~~lw~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~w~pq~~iL~~~~v~~~ItHg 188 (299)
|-+||.+ +.+.+++....|+..+..+=..+-+ ....|+.+.+-. -+ .....+++||.=+
T Consensus 3 IimGS~S--D~~~~~~a~~~L~~~gi~~dv~V~S------aHRtp~~~~~~~----------~~---a~~~g~~viIa~A 61 (156)
T TIGR01162 3 IIMGSDS--DLPTMKKAADILEEFGIPYELRVVS------AHRTPELMLEYA----------KE---AEERGIKVIIAGA 61 (156)
T ss_pred EEECcHh--hHHHHHHHHHHHHHcCCCeEEEEEC------cccCHHHHHHHH----------HH---HHHCCCeEEEEeC
Confidence 3466664 4566788888888777654333321 112333322111 00 1111234488888
Q ss_pred Cchhhhhhhhc---CcCeeeccCC
Q 022329 189 GWNSTMESICG---GVPVICWPFF 209 (299)
Q Consensus 189 G~~s~~Eal~~---GvP~i~~P~~ 209 (299)
|...-+-.+.+ -+|+|++|..
T Consensus 62 G~aa~Lpgvva~~t~~PVIgvP~~ 85 (156)
T TIGR01162 62 GGAAHLPGMVAALTPLPVIGVPVP 85 (156)
T ss_pred CccchhHHHHHhccCCCEEEecCC
Confidence 86555444443 4699999984
No 227
>PRK06276 acetolactate synthase catalytic subunit; Reviewed
Probab=20.50 E-value=6.3e+02 Score=25.13 Aligned_cols=59 Identities=15% Similarity=0.184 Sum_probs=34.6
Q ss_pred eeeccCchhhhhh--hhcCcCeeeccCCcChHhHHHHHHHHhCc-EEEecCCCCHHHHHHHHHHHhc
Q 022329 184 FLTHCGWNSTMES--ICGGVPVICWPFFAEQQTNCRYACTTWGI-GMEVNHDVKRGDIEALVKEMMD 247 (299)
Q Consensus 184 ~ItHgG~~s~~Ea--l~~GvP~i~~P~~~DQ~~na~~v~~~~g~-G~~l~~~~~~~~i~~av~~vl~ 247 (299)
++..+|++.+... ..++-+....-+ ......++.+ +.+|+ |.++ -+.+++.+++++.++
T Consensus 470 V~NN~~~g~~~~~~~~~~~~~~~~~~~-~~~~d~~~la-~a~G~~~~~v---~~~~el~~al~~a~~ 531 (586)
T PRK06276 470 IFDNRTLGMVYQWQNLYYGKRQSEVHL-GETPDFVKLA-ESYGVKADRV---EKPDEIKEALKEAIK 531 (586)
T ss_pred EEeCCchHHHHHHHHHHhCCCcccccC-CCCCCHHHHH-HHCCCeEEEE---CCHHHHHHHHHHHHh
Confidence 7888888876432 334433222111 0123455555 77775 4444 378999999998874
No 228
>TIGR03845 sulfopyru_alph sulfopyruvate decarboxylase, alpha subunit. This model represents the alpha subunit, or the N-terminal region, of sulfopyruvate decarboxylase, an enzyme of coenzyme M biosynthesis. Coenzyme M is found almost exclusively in the methanogenic archaea. However, the enzyme also occurs in Roseovarius nubinhibens ISM in a degradative pathway, where the resulting sulfoacetaldehyde is desulfonated to acetyl phosphate, then converted to acetyl-CoA (see PubMed:19581363).
Probab=20.27 E-value=2e+02 Score=23.36 Aligned_cols=26 Identities=15% Similarity=0.203 Sum_probs=19.2
Q ss_pred ceeeccCc----hhhhhhh-hcCcCeeeccC
Q 022329 183 AFLTHCGW----NSTMESI-CGGVPVICWPF 208 (299)
Q Consensus 183 ~~ItHgG~----~s~~Eal-~~GvP~i~~P~ 208 (299)
++..+.|. |.+.++. ..++|+|++=-
T Consensus 62 v~~~~sG~gn~~~~l~~a~~~~~~Pvl~i~g 92 (157)
T TIGR03845 62 ILMQSSGLGNSINALASLNKTYGIPLPILAS 92 (157)
T ss_pred EEEeCCcHHHHHHHHHHHHHcCCCCEEEEEe
Confidence 36666664 4566777 99999999873
No 229
>PF10933 DUF2827: Protein of unknown function (DUF2827); InterPro: IPR021234 This is a family of uncharacterised proteins found in Burkholderia.
Probab=20.16 E-value=4.9e+02 Score=24.46 Aligned_cols=86 Identities=14% Similarity=0.188 Sum_probs=59.5
Q ss_pred EEeeccchhhhhc-CCCcCceeeccC---ch-hhhhhhhcCcCeeeccCCcChHhHHHHHHHHhCcEEEecCCCCHHHHH
Q 022329 165 FIVSWCNQEQVLS-HPSVGAFLTHCG---WN-STMESICGGVPVICWPFFAEQQTNCRYACTTWGIGMEVNHDVKRGDIE 239 (299)
Q Consensus 165 ~v~~w~pq~~iL~-~~~v~~~ItHgG---~~-s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~i~ 239 (299)
.+.+-.+-...|+ |.++ +|+|== .| .-+|+++.|-|+| .|+..+ . ++|..-. +.+..+=.
T Consensus 256 sfegR~~~p~fla~~tD~--VvSHqWeN~lNYlY~daLyggYPLV---------HNS~~l-~--d~GYYY~-~fD~~~G~ 320 (364)
T PF10933_consen 256 SFEGRFDFPDFLAQHTDA--VVSHQWENPLNYLYYDALYGGYPLV---------HNSPLL-K--DVGYYYP-DFDAFEGA 320 (364)
T ss_pred EEeeecChHHHHHhCCCE--EEeccccchhhHHHHHHHhcCCCcc---------cCcchh-c--ccCcCCC-CccHHHHH
Confidence 3555556555454 5555 999953 33 3489999999996 699888 5 4887776 56666666
Q ss_pred HHHHHHhc--CChhHHHHHHHHHHHHHH
Q 022329 240 ALVKEMMD--GDEGKKMRQKAWEWKKKA 265 (299)
Q Consensus 240 ~av~~vl~--~~~~~~~r~~a~~l~~~~ 265 (299)
+++.+++. |...+.|+++|+++=..+
T Consensus 321 r~L~~A~~~HD~~~~~Y~~ra~~~l~~~ 348 (364)
T PF10933_consen 321 RQLLRAIREHDADLDAYRARARRLLDRL 348 (364)
T ss_pred HHHHHHHHHccccHHHHHHHHHHHHHhh
Confidence 66666653 555678999998876553
No 230
>TIGR03164 UHCUDC OHCU decarboxylase. Previously thought to only proceed spontaneously, the decarboxylation of 2-oxo-4-hydroxy-4-carboxy--5-ureidoimidazoline (OHCU) has been recently been shown to be catalyzed by this enzyme in Mus musculus. Homologs of this enzyme are found adjacent to and fused with uricase in a number of prokaryotes and are represented by this model.
Probab=20.15 E-value=4.8e+02 Score=21.19 Aligned_cols=53 Identities=15% Similarity=0.231 Sum_probs=41.8
Q ss_pred HhHHHHHHHHhCcEEEecC-CCCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHH
Q 022329 213 QTNCRYACTTWGIGMEVNH-DVKRGDIEALVKEMMDGDEGKKMRQKAWEWKKKAE 266 (299)
Q Consensus 213 ~~na~~v~~~~g~G~~l~~-~~~~~~i~~av~~vl~~~~~~~~r~~a~~l~~~~~ 266 (299)
..|..+- +++|.-..+.- .-+.++|.+.+++-|+|..-.+++..+.++.+.++
T Consensus 98 ~lN~~Y~-~kFGfpFvi~v~g~~~~~Il~~l~~Rl~n~~~~E~~~a~~Ev~kIa~ 151 (157)
T TIGR03164 98 RLNNAYR-ARFGFPFIMAVKGKTKQSILAAFEARLNNDRETEFARALREIERIAR 151 (157)
T ss_pred HHHHHHH-HHCCCeeEEeeCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Confidence 4688888 89998877764 46899999999999988756677777777777754
No 231
>PRK13932 stationary phase survival protein SurE; Provisional
Probab=20.02 E-value=1.4e+02 Score=26.62 Aligned_cols=26 Identities=15% Similarity=0.321 Sum_probs=21.0
Q ss_pred eeeccC-chhhhhhhhcCcCeeeccCC
Q 022329 184 FLTHCG-WNSTMESICGGVPVICWPFF 209 (299)
Q Consensus 184 ~ItHgG-~~s~~Eal~~GvP~i~~P~~ 209 (299)
-|++.| .+..+||..+|+|.|.+-+.
T Consensus 108 dv~ySGTVgAA~Ea~~~GiPsIA~S~~ 134 (257)
T PRK13932 108 NTLYSGTVAAALEGAIQGIPSLAFSLT 134 (257)
T ss_pred CEecchhHHHHHHHHHcCCCeEEEEcc
Confidence 445555 67889999999999999973
Done!