Your job contains 1 sequence.
>022330
MSSSFTGSFGDDDFMAYDPRLASQGFNSSFSQFEGDSVKDSAGDSSPIFSSQSYGAGDEV
FSSNPLPDTPSPPSIYAAGGGFSSFSPERNGKSFGGGFGAEDDSILPPPTEMPAEEGFAL
REWRRQNAIRLEQKEKKEREMLREIIEEAEQYKVEFYRKRALAVENNKASNREKEKLFLA
SWEKFHGEAEKNYWKAIAELIPYEVPAIEKRGKKKDQEKKKPSIIVIQGPKPGKPTDLSR
MRQILVKLKHNPPPHMNPKPPPPPQTEPTKDAKTSPAVGSGTATSKPAAPATPKGVAAA
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 022330
(299 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2061196 - symbol:CLC2 "clathrin light chain 2"... 555 1.1e-53 1
TAIR|locus:2074378 - symbol:CLC3 "clathrin light chain 3"... 512 4.1e-49 1
TAIR|locus:2051472 - symbol:AT2G20760 species:3702 "Arabi... 457 2.8e-43 1
UNIPROTKB|Q5ZHR7 - symbol:CLTA "Uncharacterized protein" ... 117 1.1e-06 2
UNIPROTKB|E1C6S9 - symbol:CLTB "Uncharacterized protein" ... 115 1.3e-06 2
UNIPROTKB|F1NUW5 - symbol:CLTB "Uncharacterized protein" ... 115 4.4e-06 2
UNIPROTKB|E2R2G2 - symbol:CLTB "Uncharacterized protein" ... 110 0.00026 1
RGD|621353 - symbol:Cltb "clathrin, light chain B" specie... 109 0.00045 1
>TAIR|locus:2061196 [details] [associations]
symbol:CLC2 "clathrin light chain 2" species:3702
"Arabidopsis thaliana" [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0030130 "clathrin
coat of trans-Golgi network vesicle" evidence=IEA] [GO:0030132
"clathrin coat of coated pit" evidence=IEA] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0009504 "cell plate" evidence=IDA]
InterPro:IPR000996 Pfam:PF01086 GO:GO:0005886 GO:GO:0006886
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016192 GO:GO:0005856
GO:GO:0005198 GO:GO:0009941 GO:GO:0030130 GO:GO:0030132
GO:GO:0009524 GO:GO:0009504 eggNOG:NOG255768 HOGENOM:HOG000241126
PANTHER:PTHR10639 EMBL:AF002109 EMBL:AY092995 EMBL:AY114610
EMBL:AK226476 EMBL:AY088269 IPI:IPI00537302 PIR:G84824
RefSeq:NP_565921.1 UniGene:At.22455 UniGene:At.67955 DIP:DIP-59589N
IntAct:O04209 PaxDb:O04209 PRIDE:O04209 EnsemblPlants:AT2G40060.1
GeneID:818594 KEGG:ath:AT2G40060 TAIR:At2g40060 InParanoid:O04209
OMA:PASPDAY PhylomeDB:O04209 ProtClustDB:CLSN2917287
Genevestigator:O04209 Uniprot:O04209
Length = 258
Score = 555 (200.4 bits), Expect = 1.1e-53, P = 1.1e-53
Identities = 121/224 (54%), Positives = 152/224 (67%)
Query: 31 SQFEGDS---VKDSAGDSSPIFSSQSYGAGDEVFSS--NPLPDTPSPPSIYAAGGGFSSF 85
S FE DS + D A +S P+ S S+ A D FS+ L S ++AA S +
Sbjct: 2 SAFEDDSFVILNDDASESVPV--SGSFDATDS-FSAFDGSLQVEDSVDDVFAAPS--SDY 56
Query: 86 SPERNGKSFGGGFGAEDDSILPPPTEMPAEEGFALREWRRQNAIRLEQKEKKEREMLREI 145
NG G G D ILPPP+EM ++EGFALREWRRQNAI+LE+KEK+E+E+L++I
Sbjct: 57 GAYSNGDGIFGSNGDHDGPILPPPSEMESDEGFALREWRRQNAIQLEEKEKREKELLKQI 116
Query: 146 IEEAEQYKVEFYRKRALAVENNKASNREKEKLFLASWEKFHGEAEKNYWKAIAELIPYEV 205
IEEA+QYK EF++K + ENNKA+NREKEKL+L + EKF+ E+ KNYWKAIAEL+P EV
Sbjct: 117 IEEADQYKEEFHKKIEVTCENNKAANREKEKLYLENQEKFYAESSKNYWKAIAELVPKEV 176
Query: 206 PAIEXXXXXXXXXX-XXPSIIVIQGPKPGKPTDLSRMRQILVKL 248
P IE P++ VIQGPKPGKPTDL+RMRQILVKL
Sbjct: 177 PTIEKRRGKKEQQDPKKPTVSVIQGPKPGKPTDLTRMRQILVKL 220
>TAIR|locus:2074378 [details] [associations]
symbol:CLC3 "clathrin light chain 3" species:3702
"Arabidopsis thaliana" [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0030130 "clathrin
coat of trans-Golgi network vesicle" evidence=IEA] [GO:0030132
"clathrin coat of coated pit" evidence=IEA] [GO:0030968
"endoplasmic reticulum unfolded protein response" evidence=RCA]
InterPro:IPR000996 Pfam:PF01086 EMBL:CP002686 GO:GO:0006886
GO:GO:0016192 GO:GO:0005198 EMBL:AF049236 GO:GO:0030130
GO:GO:0030132 HOGENOM:HOG000241126 PANTHER:PTHR10639 EMBL:AK228229
IPI:IPI00529954 PIR:T51160 RefSeq:NP_566956.4 UniGene:At.11927
PRIDE:F4J5M9 EnsemblPlants:AT3G51890.1 GeneID:824352
KEGG:ath:AT3G51890 TAIR:At3g51890 eggNOG:NOG318928
InParanoid:O65024 OMA:SAMEKEE Uniprot:F4J5M9
Length = 258
Score = 512 (185.3 bits), Expect = 4.1e-49, P = 4.1e-49
Identities = 114/214 (53%), Positives = 137/214 (64%)
Query: 35 GDSVKDSAGDSSPIFSSQSYGAGDEVFSSNPLPDTPSPPSIYAAGGGFSSFSPERNGKSF 94
GD +A +S F SQ + + F S P ++ P G SS PE
Sbjct: 24 GDGGNFTAYESR--FQSQRFDSSFSNFDSQPEKESDLPC-------GDSSPRPETQSPPS 74
Query: 95 GGGFGAEDDSILPPPTEMPAEEGFALREWRRQNAIRLEQKEKKEREMLREIIEEAEQYKV 154
F +DSILPPP+ M EEGFALREWRR NA+RLE+KEK+E+EM+++I+E AEQYK
Sbjct: 75 INSFDDTNDSILPPPSAMEKEEGFALREWRRLNALRLEEKEKEEKEMVQQILEAAEQYKA 134
Query: 155 EFYRKRALAVENNKASNREKEKLFLASWEKFHGEAEKNYWKAIAELIPYEVPAIEXXXXX 214
EFY KR + +ENNK NREKEK FL + EKF+ EA+KN WKAIAELIP EVP IE
Sbjct: 135 EFYSKRNVTIENNKKLNREKEKFFLENQEKFYAEADKNNWKAIAELIPREVPVIENRGNK 194
Query: 215 XXXXXXXPSIIVIQGPKPGKPTDLSRMRQILVKL 248
+I VIQGPKPGKPTDLSRMRQ+L KL
Sbjct: 195 KKTA----TITVIQGPKPGKPTDLSRMRQVLTKL 224
>TAIR|locus:2051472 [details] [associations]
symbol:AT2G20760 species:3702 "Arabidopsis thaliana"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006499 "N-terminal protein
myristoylation" evidence=RCA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=RCA] [GO:0007030 "Golgi
organization" evidence=RCA] [GO:0007033 "vacuole organization"
evidence=RCA] [GO:0043090 "amino acid import" evidence=RCA]
InterPro:IPR000996 Pfam:PF01086 GO:GO:0005829 GO:GO:0005886
GO:GO:0006886 EMBL:CP002685 GO:GO:0016192 GO:GO:0005198
GO:GO:0030130 GO:GO:0030132 EMBL:AC006234 EMBL:AY057515
EMBL:AY057654 EMBL:BT025885 EMBL:AY084472 IPI:IPI00532112
PIR:A84593 RefSeq:NP_565484.1 UniGene:At.23177 PRIDE:Q9SKU1
EnsemblPlants:AT2G20760.1 GeneID:816605 KEGG:ath:AT2G20760
TAIR:At2g20760 eggNOG:NOG255768 HOGENOM:HOG000241126
InParanoid:Q9SKU1 OMA:NEMREEG PhylomeDB:Q9SKU1
ProtClustDB:CLSN2914962 Genevestigator:Q9SKU1 PANTHER:PTHR10639
Uniprot:Q9SKU1
Length = 338
Score = 457 (165.9 bits), Expect = 2.8e-43, P = 2.8e-43
Identities = 109/204 (53%), Positives = 123/204 (60%)
Query: 50 SSQSYGAGDEVFSSNPLPDTPSPPSIYAAGGGFSSFSPERNGKSFGGGFG-----AEDDS 104
S YG G +S+P D SP F S + NG GGG G A D
Sbjct: 52 SPNGYGFG----ASSPNHDFSSP---------FESSVNDANGN--GGGSGGDAIFASDGP 96
Query: 105 ILPPPTEMPAEEGFALREWRRQNAIRLEQKEKKEREMLREIIEEAEQYKVEFYRKRALAV 164
ILP P EM EEGF REWRR N I LE+KEKKE+EM +II EAE +K FY KR +
Sbjct: 97 ILPDPNEM-REEGFQRREWRRLNTIHLEEKEKKEKEMRNQIITEAEDFKKAFYEKRDKTI 155
Query: 165 ENNKASNREKEKLFLASWEKFHGEAEKNYWKAIAELIPYEVPAIEXXXXXXXXXXXXPSI 224
E NK NREKEKL+ A+ EKFH E +K+YWKAIAELIP EVP IE PS+
Sbjct: 156 ETNKTDNREKEKLYWANQEKFHKEVDKHYWKAIAELIPREVPNIEKKRGKKDPDKK-PSV 214
Query: 225 IVIQGPKPGKPTDLSRMRQILVKL 248
VIQGPKPGKPTDL RMRQI +KL
Sbjct: 215 NVIQGPKPGKPTDLGRMRQIFLKL 238
>UNIPROTKB|Q5ZHR7 [details] [associations]
symbol:CLTA "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030130
"clathrin coat of trans-Golgi network vesicle" evidence=IEA]
[GO:0030132 "clathrin coat of coated pit" evidence=IEA]
InterPro:IPR000996 Pfam:PF01086 PROSITE:PS00581 GO:GO:0006886
GO:GO:0016192 GO:GO:0005198 GO:GO:0030130 GO:GO:0030132
PANTHER:PTHR10639 eggNOG:NOG312397 CTD:1211
GeneTree:ENSGT00390000010441 HOGENOM:HOG000008147
HOVERGEN:HBG003386 KO:K04644 OMA:ESNGPSD OrthoDB:EOG4TF0M2
EMBL:AADN02065324 EMBL:AADN02065325 EMBL:AADN02065326 EMBL:AJ721067
IPI:IPI00594350 RefSeq:NP_001034402.1 UniGene:Gga.4834
STRING:Q5ZHR7 Ensembl:ENSGALT00000024737 GeneID:427284
KEGG:gga:427284 InParanoid:Q5ZHR7 NextBio:20828568 Uniprot:Q5ZHR7
Length = 215
Score = 117 (46.2 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 44/174 (25%), Positives = 74/174 (42%)
Query: 35 GDSVKDSAG-DSSPIFSSQSYG--AGDEVFSSNPLPDTPSPPSIYAAGGGFSSFSPE--R 89
G+ D A D + F +Q AG E + ++ P A GF S + +
Sbjct: 17 GNGATDGAEEDPAAAFLAQQENEIAGIENDEGYGILESGDVPEALQAADGFDSGAVDGVM 76
Query: 90 NGKSFGGGFGAEDDSILPPPTEMPAEEGFALREWRRQNAIRLEQKEKKEREMLREIIEEA 149
NG + G D + E ++R+WR + RLEQ + R+ E E+A
Sbjct: 77 NGVVYQESNGPTDCYAAISQVDRLQSEPESIRKWREEQKERLEQLDANSRKQEAEWKEKA 136
Query: 150 EQYKVEFYRKRALAVENNKASNREKEKLFLASWEKFHGEAEKNYWKAIAELIPY 203
+ E+Y ++ ++ KASNR E+ F++ E E W+ +A+L +
Sbjct: 137 IKELEEWYARQDEKLQKTKASNRAAEEAFVSDAEDVFPGTE---WERVAQLCDF 187
Score = 46 (21.3 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 10/20 (50%), Positives = 13/20 (65%)
Query: 230 PKPGKPT-DLSRMRQILVKL 248
PK K D+SRMR +L+ L
Sbjct: 189 PKSSKQAKDVSRMRSVLISL 208
>UNIPROTKB|E1C6S9 [details] [associations]
symbol:CLTB "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030130
"clathrin coat of trans-Golgi network vesicle" evidence=IEA]
[GO:0030132 "clathrin coat of coated pit" evidence=IEA]
InterPro:IPR000996 Pfam:PF01086 PROSITE:PS00224 PROSITE:PS00581
GO:GO:0006886 GO:GO:0016192 GO:GO:0005198 GO:GO:0030130
GO:GO:0030132 PANTHER:PTHR10639 GeneTree:ENSGT00390000010441
EMBL:AADN02028710 IPI:IPI00582897 PRIDE:E1C6S9
Ensembl:ENSGALT00000005292 Uniprot:E1C6S9
Length = 210
Score = 115 (45.5 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 45/180 (25%), Positives = 81/180 (45%)
Query: 30 FSQFEGDSVKDSAGDSSPIFSSQSYGAG---DEVFSSNPLPDTPSPPSIYAAG---GGFS 83
FS EG ++ ++ + +S AG DE F D+ S P+ AA GF
Sbjct: 8 FSSSEGAGAEEDPA-AAFLAQQESEIAGIENDEGFGPTD-GDSASAPAGQAAPPETAGFQ 65
Query: 84 SFSPERNGKSFGGGFGAEDDSILPPPTEMPAEEGFALREWRRQNAIRLEQKEKKEREMLR 143
+ NG F G D + +E ++R+WR + RLE+ + + +
Sbjct: 66 NGGATVNGDVFQESNGPTDAYAAIAKADRLTQEPESIRKWREEQKKRLEELDAASKVTEQ 125
Query: 144 EIIEEAEQYKVEFYRKRALAVENNKASNREKEKLFLASWEKFHGEAEKNYWKAIAELIPY 203
E E+A++ E+ ++ +E N+A+NR E+ FL ++ E + W+ +A+L +
Sbjct: 126 EWREKAKKDLEEWNLRQNEQMEKNRANNRASEEAFLKESKE---ETPGSEWEKVAQLCDF 182
Score = 47 (21.6 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 10/20 (50%), Positives = 14/20 (70%)
Query: 230 PKPGKPT-DLSRMRQILVKL 248
PK K + D+SRMR +L+ L
Sbjct: 184 PKSSKQSKDVSRMRSVLISL 203
>UNIPROTKB|F1NUW5 [details] [associations]
symbol:CLTB "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030130
"clathrin coat of trans-Golgi network vesicle" evidence=IEA]
[GO:0030132 "clathrin coat of coated pit" evidence=IEA] [GO:0005802
"trans-Golgi network" evidence=IEA] [GO:0060170 "cilium membrane"
evidence=IEA] InterPro:IPR000996 Pfam:PF01086 PROSITE:PS00224
PROSITE:PS00581 GO:GO:0006886 GO:GO:0016192 GO:GO:0005198
GO:GO:0005802 GO:GO:0030130 GO:GO:0030132 GO:GO:0060170
PANTHER:PTHR10639 GeneTree:ENSGT00390000010441 EMBL:AADN02028710
IPI:IPI00818992 Ensembl:ENSGALT00000005291 OMA:EWERVSK
Uniprot:F1NUW5
Length = 255
Score = 115 (45.5 bits), Expect = 4.4e-06, Sum P(2) = 4.4e-06
Identities = 45/180 (25%), Positives = 81/180 (45%)
Query: 30 FSQFEGDSVKDSAGDSSPIFSSQSYGAG---DEVFSSNPLPDTPSPPSIYAAG---GGFS 83
FS EG ++ ++ + +S AG DE F D+ S P+ AA GF
Sbjct: 8 FSSSEGAGAEEDPA-AAFLAQQESEIAGIENDEGFGPTD-GDSASAPAGQAAPPETAGFQ 65
Query: 84 SFSPERNGKSFGGGFGAEDDSILPPPTEMPAEEGFALREWRRQNAIRLEQKEKKEREMLR 143
+ NG F G D + +E ++R+WR + RLE+ + + +
Sbjct: 66 NGGATVNGDVFQESNGPTDAYAAIAKADRLTQEPESIRKWREEQKKRLEELDAASKVTEQ 125
Query: 144 EIIEEAEQYKVEFYRKRALAVENNKASNREKEKLFLASWEKFHGEAEKNYWKAIAELIPY 203
E E+A++ E+ ++ +E N+A+NR E+ FL ++ E + W+ +A+L +
Sbjct: 126 EWREKAKKDLEEWNLRQNEQMEKNRANNRASEEAFLKESKE---ETPGSEWEKVAQLCDF 182
Score = 47 (21.6 bits), Expect = 4.4e-06, Sum P(2) = 4.4e-06
Identities = 10/20 (50%), Positives = 14/20 (70%)
Query: 230 PKPGKPT-DLSRMRQILVKL 248
PK K + D+SRMR +L+ L
Sbjct: 184 PKSSKQSKDVSRMRSVLISL 203
>UNIPROTKB|E2R2G2 [details] [associations]
symbol:CLTB "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060170 "cilium membrane" evidence=IEA]
[GO:0005802 "trans-Golgi network" evidence=IEA] [GO:0030132
"clathrin coat of coated pit" evidence=IEA] [GO:0030130 "clathrin
coat of trans-Golgi network vesicle" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR000996
Pfam:PF01086 PROSITE:PS00224 PROSITE:PS00581 GO:GO:0006886
GO:GO:0016192 GO:GO:0005198 GO:GO:0005802 GO:GO:0030130
GO:GO:0030132 GO:GO:0060170 PANTHER:PTHR10639 CTD:1212 KO:K04645
RefSeq:XP_866115.1 Ensembl:ENSCAFT00000026430 GeneID:489104
KEGG:cfa:489104 NextBio:20862325 Uniprot:E2R2G2
Length = 211
Score = 110 (43.8 bits), Expect = 0.00026, P = 0.00026
Identities = 44/183 (24%), Positives = 78/183 (42%)
Query: 30 FSQFEGDSVKDSAGDSSPIFSSQSYG--AG---DEVFS----SNPLPDTPSPPSIYAAGG 80
FS E + + + D + F +Q AG DE F S+ P P A G
Sbjct: 8 FSSSESGAPEAAEEDPAAAFLAQQESEIAGIENDEGFGAPAGSHAALAQPGP----AGGA 63
Query: 81 GFSSFSPERNGKSFGGGFGAEDDSILPPPTEMPAEEGFALREWRRQNAIRLEQKEKKERE 140
G NG F G D + +E ++R+WR + RL++ + +
Sbjct: 64 GSEDMGTTINGDVFQEANGPADGYAAIAQADRLTQEPESIRKWREEQRKRLQELDAASKV 123
Query: 141 MLREIIEEAEQYKVEFYRKRALAVENNKASNREKEKLFLASWEKFHGEAEKNYWKAIAEL 200
+E E+A++ E+ ++++ VE NK +NR E+ F+ ++ E W+ +A+L
Sbjct: 124 TEQEWREKAKKDLEEWNQRQSEQVEKNKINNRASEEAFVKESKE---ETPGTEWEKVAQL 180
Query: 201 IPY 203
+
Sbjct: 181 CDF 183
>RGD|621353 [details] [associations]
symbol:Cltb "clathrin, light chain B" species:10116 "Rattus
norvegicus" [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0005326 "neurotransmitter transporter activity"
evidence=NAS] [GO:0005802 "trans-Golgi network" evidence=IEA;ISO]
[GO:0005886 "plasma membrane" evidence=ISO] [GO:0006836
"neurotransmitter transport" evidence=NAS] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0007269
"neurotransmitter secretion" evidence=NAS] [GO:0016183 "synaptic
vesicle coating" evidence=NAS] [GO:0030118 "clathrin coat"
evidence=IDA] [GO:0030125 "clathrin vesicle coat" evidence=NAS]
[GO:0030130 "clathrin coat of trans-Golgi network vesicle"
evidence=IEA] [GO:0030132 "clathrin coat of coated pit"
evidence=NAS] [GO:0042277 "peptide binding" evidence=IDA]
[GO:0060170 "cilium membrane" evidence=IEA;ISO] InterPro:IPR000996
Pfam:PF01086 PROSITE:PS00224 PROSITE:PS00581 RGD:621353
GO:GO:0006886 GO:GO:0005198 GO:GO:0042277 GO:GO:0005802
GO:GO:0007269 GO:GO:0030130 GO:GO:0016183 GO:GO:0030132
GO:GO:0030125 GO:GO:0060170 PANTHER:PTHR10639 eggNOG:NOG312397
GeneTree:ENSGT00390000010441 HOGENOM:HOG000008147
HOVERGEN:HBG003386 OrthoDB:EOG4TF0M2 CTD:1212 KO:K04645 OMA:VMEQEWR
EMBL:M15883 EMBL:M19262 IPI:IPI00207308 IPI:IPI00230927 PIR:B25994
RefSeq:NP_446287.1 UniGene:Rn.3440 STRING:P08082 PhosphoSite:P08082
PRIDE:P08082 Ensembl:ENSRNOT00000023651 Ensembl:ENSRNOT00000032402
GeneID:116561 KEGG:rno:116561 UCSC:RGD:621353 InParanoid:P08082
NextBio:619229 Genevestigator:P08082 GermOnline:ENSRNOG00000017506
GO:GO:0005326 Uniprot:P08082
Length = 229
Score = 109 (43.4 bits), Expect = 0.00045, P = 0.00045
Identities = 38/154 (24%), Positives = 66/154 (42%)
Query: 30 FSQFEGDSVKDSAGDSSPIFSSQSYG--AG---DEVFSSNPLPDTPSPPSIYAAGGGFSS 84
FS E + + + D + F +Q AG D F + S A+GGG
Sbjct: 8 FSSSESGAPEAAEEDPAAAFLAQQESEIAGIENDSGFGAPAASQVASAQPGLASGGGSED 67
Query: 85 FSPERNGKSFGGGFGAEDDSILPPPTEMPAEEGFALREWRRQNAIRLEQKEKKEREMLRE 144
NG F G D + +E ++R+WR + RL++ + + +E
Sbjct: 68 MGTTVNGDVFQEANGPADGYAAIAQADRLTQEPESIRKWREEQKKRLQELDAASKVTEQE 127
Query: 145 IIEEAEQYKVEFYRKRALAVENNKASNREKEKLF 178
E+A++ E+ ++++ VE NK +NR +K F
Sbjct: 128 WREKAKKDLEEWNQRQSEQVEKNKINNRIADKAF 161
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.311 0.130 0.375 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 299 238 0.00091 113 3 11 23 0.38 34
32 0.44 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 8
No. of states in DFA: 584 (62 KB)
Total size of DFA: 176 KB (2102 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 28.84u 0.16s 29.00t Elapsed: 00:00:01
Total cpu time: 28.84u 0.16s 29.00t Elapsed: 00:00:01
Start: Thu May 9 16:29:11 2013 End: Thu May 9 16:29:12 2013