STRING 9.05 
  AT3G51890 protein (Arabidopsis thaliana) - STRING network view
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
AT3G51890
protein binding / structural molecule; protein binding / structural molecule; FUNCTIONS IN- protein binding, structural molecule activity; INVOLVED IN- intracellular protein transport, vesicle-mediated transport; LOCATED IN- clathrin coat of trans-Golgi network vesicle, clathrin coat of coated pit; EXPRESSED IN- 20 plant structures; EXPRESSED DURING- 13 growth stages; CONTAINS InterPro DOMAIN/s- Clathrin light chain (InterPro-IPR000996); BEST Arabidopsis thaliana protein match is- protein binding / structural molecule (TAIR-AT2G40060.1); Has 258 Blast hits to 256 proteins in 83 species [...] (258 aa)
(Arabidopsis thaliana)
Predicted Functional Partners:
DL3220C
zinc finger (C3HC4-type RING finger) family protein / ankyrin repeat family protein; zinc finge [...] (376 aa)
       0.573
SNAP33
SNAP33 (SOLUBLE N-ETHYLMALEIMIDE-SENSITIVE FACTOR ADAPTOR PROTEIN 33); SNAP receptor/ protein b [...] (300 aa)
       0.508
WRKY25
WRKY25; transcription factor; member of WRKY Transcription Factor; Group I. Located in nucleus. [...] (393 aa)
       0.484
AT1G49050
aspartyl protease family protein; aspartyl protease family protein; FUNCTIONS IN- aspartic-type [...] (583 aa)
       0.475
AT1G16670
protein kinase family protein; protein kinase family protein; FUNCTIONS IN- protein serine/thre [...] (390 aa)
       0.475
AT5G35200
epsin N-terminal homology (ENTH) domain-containing protein; epsin N-terminal homology (ENTH) do [...] (544 aa)
      0.472
AT1G10340
ankyrin repeat family protein; ankyrin repeat family protein; FUNCTIONS IN- protein binding; IN [...] (578 aa)
       0.457
EDA39
EDA39 (embryo sac development arrest 39); calmodulin binding; embryo sac development arrest 39 [...] (526 aa)
       0.435
AT5G25440
protein kinase family protein; protein kinase family protein; FUNCTIONS IN- protein tyrosine ki [...] (313 aa)
       0.432
AT2G31880
leucine-rich repeat transmembrane protein kinase, putative; Encodes a putative leucine rich rep [...] (641 aa)
       0.419
 
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Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:
Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining
 
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